ID expr.6.4.exp_090507.CEL expr.6.4.exp_150607.CEL expr.6.5.exp_090507.CEL expr.6.5.exp_150607.CEL expr.6.7.exp_1_040507.CEL expr.6.7.exp_150607.CEL expr.7.2.exp_1_040507.CEL expr.7.2.exp_150607.CEL expr.6.4.3_exp160807.CEL expr.6.4.4_exp160807.CEL expr.6.5.11_exp160807.CEL expr.6.5.2_exp160807.CEL expr.6.5.6_exp160807.CEL expr.6.5.8_exp160807.CEL expr.6.7.19_exp160807.CEL expr.6.7.20_exp160807.CEL expr.6.7.21_exp160807.CEL expr.6.7.22_exp160807.CEL expr.7.2.1_exp160807.CEL se.expr.6.4.exp_090507.CEL se.expr.6.4.exp_150607.CEL se.expr.6.5.exp_090507.CEL se.expr.6.5.exp_150607.CEL se.expr.6.7.exp_1_040507.CEL se.expr.6.7.exp_150607.CEL se.expr.7.2.exp_1_040507.CEL se.expr.7.2.exp_150607.CEL se.expr.6.4.3_exp160807.CEL se.expr.6.4.4_exp160807.CEL se.expr.6.5.11_exp160807.CEL se.expr.6.5.2_exp160807.CEL se.expr.6.5.6_exp160807.CEL se.expr.6.5.8_exp160807.CEL se.expr.6.7.19_exp160807.CEL se.expr.6.7.20_exp160807.CEL se.expr.6.7.21_exp160807.CEL se.expr.6.7.22_exp160807.CEL se.expr.7.2.1_exp160807.CEL Chr ChrList StrandList From.Min From.Max From.Mean start end strand type Note isChr5 isClean IDlist Short.description Currator.summary Description logFC t P.Value adj.P.Val B A M M.se AT5G13930_at 3.09944572301999 3.36867923834480 2.32383926550853 2.11702641830610 1.77483795882963 2.00861115423344 9.67082782074494 10.1024350844910 8.61208096353118 9.17755047959627 7.08351846326754 9.02512934207427 3.45007011868116 6.36008815822974 8.83192281455309 6.08976083354929 3.38718791330455 5.75980862736084 8.2329886885694 0.337477760358831 0.334558873016972 0.356201823792234 0.350888405825822 0.359924370125840 0.370107829620834 0.333847469740514 0.333243907388479 0.341969445220227 0.333007693121797 0.332349991621826 0.332286127846713 0.338596899238924 0.332035741417653 0.330930904040266 0.336925578931195 0.347302505176225 0.337704016188385 0.339864043333196 5 5 + 4489533 4490004 4489752.636 4488690 4490266 + gene protein_coding_gene TRUE TRUE AT5G13930.1 CHS (CHALCONE SYNTHASE); naringenin-chalcone synthase Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. Identical to Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) (TRANSPARENT TESTA 4 protein) (CHS) [Arabidopsis Thaliana] (GB:P13114;GB:Q43132;GB:Q940L6;GB:Q941R9); similar to chalcone and stilbene synthase family protein [Arabidopsis thaliana] (TAIR:AT4G34850.1); similar to chalcone synthase [Halimolobos perplexa var. perplexa] (GB:AAF23569.1); similar to chalcone synthase [Arabis fendleri] (GB:AAF23565.1); similar to chalcone synthase [Capsella rubella] (GB:AAF23581.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) -4.48507857319755 -44.1335806077677 2.42695476674044e-13 1.16251133326867e-09 15.0197507123133 11.7695340801564 -4.48507857319755 0.103282319779167 AT5G48900_at 7.44860946052577 7.76787855361145 3.13172336620234 3.33978611962973 3.53139212348504 3.55960979494557 9.10090574594247 9.0764909694055 8.68736278194393 8.774421035492 9.25417141373567 10.2158610555911 9.35589233070234 8.89008280245618 10.0219984348889 9.26028086425271 6.98517370699792 9.27584586077063 9.7813515285682 0.194242648955921 0.195667842116667 0.215600967169476 0.207135089606986 0.205956775281655 0.219566401616521 0.190008267526523 0.192879144219964 0.192266146682974 0.193762003827435 0.190008267526523 0.192540613107318 0.190008267526523 0.19041589104666 0.194990945251636 0.190305971062872 0.209000953099424 0.192421658697408 0.190008267526523 5 5 + 19845304 19846108 19845828.273 19842363 19846318 + gene protein_coding_gene TRUE TRUE AT5G48900.1 pectate lyase family protein Identical to Probable pectate lyase 20 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q93WF1;GB:Q8LDB4;GB:Q9FI81); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G24670.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G13210.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G07010.1); similar to pectate lyase [Fragaria x ananassa] (GB:AAK66161.1); similar to ripening-related pectate lyase [Man (GB:AAX88800.1); similar to pectate lyase B [Fragaria x ananassa] (GB:AAK66160.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -3.42350288385476 -38.3842460596628 1.05379443678598e-12 5.04662155776804e-09 14.8975751425065 14.9887787287230 -3.42350288385476 0.0662632570616535 AT5G60610_at 0.47193487041811 0.688018269584166 4.24062957569215 4.22536409461309 5.58717051661902 5.17055330005376 0.720959449774976 0.781845461405405 1.03699448949133 0.758594067593838 4.05851274524134 3.28383123783477 4.75574453292965 4.15852659599434 3.8829157044447 3.99697744133215 4.55421778302649 3.88404251769284 0.778331539177667 0.29954677370812 0.304003204741207 0.303697718850592 0.303856131894717 0.294141939412978 0.303733924239375 0.291778205703560 0.304299574874961 0.294854880549899 0.307284041725415 0.29790113383038 0.291938257436025 0.291906977013954 0.295246675186265 0.291778205703560 0.291778205703560 0.303849956619557 0.296482659744897 0.309604462758001 5 5 + 24381851 24382575 24382121 24380817 24382754 + gene protein_coding_gene TRUE TRUE AT5G60610.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G26860.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE78248.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 3.37189297866038 35.8766523239153 2.14303423209909e-12 1.02608479032904e-08 14.8264041824527 5.20071915988657 3.37189297866038 0.0819413525882631 AT5G24470_at 10.7571532265792 10.8836709072374 10.7497195710861 10.6958660080735 11.7220710777589 11.4320229187142 5.18287687902041 5.01199791446558 4.33535175693041 3.10749041503632 7.36364166390188 7.82243771702625 7.42433341542747 8.29731181890888 7.25517514963212 6.45867413434506 7.64667743477548 7.11556724275924 2.98810060819448 0.324507023440168 0.325627787489842 0.324790715410429 0.324366628240032 0.329027873993121 0.327694081493219 0.323258703320552 0.315115446670247 0.342864973621369 0.338106906385165 0.323222812378649 0.31872196745625 0.314068927010782 0.314936354452093 0.316513494786742 0.315583830701753 0.322985943081892 0.331813982193778 0.343187346813134 5 5 - 8356230 8356862 8356634.364 8355954 8358876 - gene protein_coding_gene TRUE TRUE AT5G24470.1 APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Identical to Two-component response regulator-like APRR5 (Pseudo-response regulator 5) (APRR5) [Arabidopsis Thaliana] (GB:Q6LA42;GB:Q9FGE3); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to pseudo-response regulator 95 homologue [Lemna paucicostata] (GB:BAE72699.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 2.58672733035128 29.3037629071092 1.78804324897566e-11 8.55936303284649e-08 14.5550568914734 15.0044014372756 2.58672733035128 0.0629297015174308 AT5G62360_at 11.0292364077358 11.1407589789803 10.4285717300907 10.5164332416279 11.8739783777667 11.7544467663919 6.09366406826987 5.47718533359317 5.52507638270376 4.94070747842891 10.3030647577165 10.1976792221581 9.77980143801336 10.2836787202326 9.85148293171796 10.7925883926414 9.19747054670967 9.65482522359098 4.32977635292743 0.193576234331100 0.187991177744669 0.196415454662793 0.187991177744669 0.196485865983776 0.198642133879920 0.233688091768486 0.239347734071791 0.228871328709853 0.249217750914306 0.187991177744669 0.187991177744669 0.193804800401371 0.191440910368760 0.187991177744669 0.192885047498908 0.200204830832159 0.194854778952713 0.222719896290017 5 5 + 25058060 25058510 25058216.455 25057882 25058687 + gene protein_coding_gene TRUE TRUE AT5G62360.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 3.06741188691311 29.2630198683195 1.81426096289415e-11 8.68305296841141e-08 14.5528471288911 17.2589980174492 3.06741188691311 0.111414249112433 AT5G42180_at 1.21278612454865 0.840716251833278 6.1382949742135 6.42611058075773 4.73657499210234 4.46267417779029 1.05528790631285 1.1299005861138 1.20876613873187 1.56125379901612 1.73120194312101 1.21368949179264 4.29649081210713 3.73473342888427 1.00417437205799 3.26319340246071 8.59577672574673 2.45410933050201 1.37827225266306 0.347465884557932 0.351876647788996 0.364115444658019 0.354072985980592 0.35482859673894 0.352453370286268 0.345511992766652 0.345511992766652 0.351620101504008 0.355303688920618 0.345782171686668 0.348254079713129 0.352466042879166 0.352559732172413 0.345511992766652 0.345511992766652 0.372102134500147 0.345511992766652 0.346498266020685 5 5|0 +|/ 16870382 16871097 16870861.111 16869858 16871452 + gene protein_coding_gene TRUE TRUE AT5G42180.1 peroxidase 64 (PER64) (P64) (PRXR4) Identical to Peroxidase 64 precursor (EC 1.11.1.7) (Atperox P64) (PRXR4) (ATP17a) (PER64) [Arabidopsis Thaliana] (GB:Q43872); similar to peroxidase [Arabidopsis thaliana] (TAIR:AT5G51890.1); similar to peroxidase [Striga asiatica] (GB:ABE66389.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 2.77823440265155 28.1904632465289 2.68094433608726e-11 1.28283186481775e-07 14.4915822144914 5.58501082511126 2.77823440265155 0.0950797225610572 AT5G18670_at 3.50391599405539 3.96067445112727 3.16662472133112 3.48966025838318 3.11978461979407 3.09652429721134 6.56467577901281 6.90197857498299 6.72903782161662 6.85955582403824 4.74512429024397 4.58911138859817 4.51777061893542 4.82204469125081 4.39626287682150 6.32429666529723 5.05527519145082 4.97430570589577 6.92006095604967 0.227959309368675 0.227932729885303 0.224393829013893 0.228750457381947 0.231869208946579 0.235600618944119 0.222814500551962 0.223394784325454 0.231383483186709 0.237437899191982 0.229372306210144 0.222814500551962 0.223790912842886 0.224252449575347 0.232226165775083 0.227231260528885 0.234354523555881 0.231021460348456 0.231745141463686 5 5 + 6227431 6227967 6227733.636 6225958 6228134 + gene protein_coding_gene TRUE TRUE AT5G18670.1 BMY3 (beta-amylase 3); beta-amylase putative beta-amylase BMY3 (BMY3) similar to CT-BMY (BETA-AMYLASE 8), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G17090.1); similar to beta-amylase [Glycine max] (GB:CAI39245.1); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) -2.89599971917764 -27.4472933973144 3.54429017237214e-11 1.69558841846283e-07 14.4453634452501 10.1076009015522 -2.89599971917764 0.113121965295774 AT5G05890_at 4.20213684927077 4.20288636947733 3.09051645454058 2.89977811486471 3.23682798325732 3.05249861735209 5.97686414203613 6.09564604272065 4.45123553439114 5.42818595737364 3.70426017162021 3.64570786027873 4.19174265915141 4.4751219476877 3.81757480486212 3.76821994302685 4.26129320261327 3.83605307565174 4.81393104669676 0.253638613274916 0.251113570795950 0.259967982316063 0.263124021086020 0.255253467172314 0.252821484321991 0.283840206998538 0.272988466489785 0.251113570795950 0.256859980513657 0.251260855109851 0.251113570795950 0.25157656767856 0.251113570795950 0.256657833203288 0.251333927170171 0.252797293131729 0.264613996288351 0.255887659310782 5 5 + 1773455 1773959 1773619.364 1772544 1774114 + gene protein_coding_gene TRUE TRUE AT5G05890.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05900.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -2.29250263934658 -26.9216439883324 4.33742331005197e-11 2.07458956919786e-07 14.4106239698024 8.52478476548929 -2.29250263934658 0.0502955718748335 AT5G67480_at 8.81876619350765 8.763141102903 9.6232824702716 9.64956235519845 9.8117187350077 9.576647497577 5.07732546687054 5.3147989974435 7.72730227572033 5.08159870824778 10.2928366098068 8.95248953916347 8.79831324781676 9.89700373493947 9.08335681177646 8.92818805961064 8.06960677645495 9.32164625948246 3.66957016752449 0.156252351953723 0.155554814704337 0.160960916969826 0.155554814704337 0.161013790899373 0.164031634606082 0.184804956628814 0.203279698262291 0.192990204020428 0.180602951725731 0.15995786919407 0.155554814704337 0.159647041962378 0.156370925846118 0.162345722728574 0.155554814704337 0.162138800947177 0.155554814704337 0.178749442370136 5 5 - 26948406 26948910 26948585.818 26948165 26950319 - gene protein_coding_gene TRUE TRUE AT5G67480.1|AT5G67480.2 BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator|BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding similar to BT5 (BTB and TAZ domain protein 5), protein binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT4G37610.1); similar to Zinc finger, TAZ-type; BTB/POZ [Medicago truncatula] (GB:ABE77424.1); contains InterPro domain Zinc finger, TAZ-type; (InterPro:IPR000197); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 2.23180667987141 25.5973352174667 7.3416954572471e-11 3.51079876765556e-07 14.3147087868369 15.6597822758702 2.23180667987141 0.058797075457741 AT5G63180_at 9.56642419005597 9.85791908060948 4.12932826198402 4.54225399908764 8.10032854185563 7.80268176060606 10.2159110552912 10.3823852820264 10.2711099158121 10.3756623777726 10.7172746819967 11.6576935036754 10.3633746141869 10.6185409208634 11.2756183848359 10.9567198475841 8.89672653367361 10.5638625144385 10.7243884954419 0.135317784981752 0.129882531475144 0.163552272178738 0.176451978883824 0.135060474445621 0.145512467700610 0.132564606325519 0.131884233861212 0.137919728553076 0.128838997995457 0.128838997995457 0.128838997995457 0.128838997995457 0.128838997995457 0.130896025361278 0.128838997995457 0.142099584598210 0.133794345331782 0.128838997995457 5 5 - 25358340 25359365 25358649.182 25358180 25360345 - gene protein_coding_gene TRUE TRUE AT5G63180.1 pectate lyase family protein Identical to Probable pectate lyase 22 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q93Z25;GB:Q9FMK5); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G24780.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT1G67750.1); similar to pectate lyase [Gossypium hirsutum] (GB:AAY85180.1); similar to pectate lyase [Malus x domestica] (GB:AAQ84042.1); similar to Pectate lyase [Prunus mume] (GB:BAE48664.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -2.5807463790367 -25.1805021365126 8.71204079368356e-11 4.16522670346011e-07 14.2817802793226 18.6187940071891 -2.5807463790367 0.105518541229286 AT5G62165_at 2.65050489089711 2.51935642883721 2.40089644801384 2.15043011724454 1.33535252532466 0.905684962478042 6.91846145261234 6.86279021364634 3.5490267815647 0.995274120693872 0.815448818931753 0.624181224657431 0.653105656080934 0.864339511877429 0.427377121000591 1.43857679602699 0.949593106641117 0.857205757804708 1.30932557911332 0.293403784374536 0.305413878844172 0.289551528624131 0.289306859082236 0.289306859082236 0.289306859082236 0.321561098492798 0.325203865296037 0.304894150850603 0.292765811356650 0.289306859082236 0.289306859082236 0.302808902843057 0.291739019150867 0.292064817694492 0.289306859082236 0.289322267534589 0.296748219872807 0.290183521354473 5 5|0 +|/ 24982400 24985624 24983762.778 24981926 24985746 + gene protein_coding_gene TRUE TRUE AT5G62165.1|AT5G62165.2|AT5G62165.3 AGL42 (AGAMOUS LIKE 42); transcription factor Encodes a MADS box transcription factor. Expressed in quiescent center. similar to AGL20 (AGAMOUS-LIKE 20), transcription factor [Arabidopsis thaliana] (TAIR:AT2G45660.1); similar to MADS-box protein [Vitis vinifera] (GB:ABF56527.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -2.31162189447598 -23.9380219057174 1.47554180347376e-10 7.05308982060459e-07 14.1747661773171 4.60790329300755 -2.31162189447598 0.0895291246641745 AT5G59320_at 9.912217136731 9.94743397927033 13.1110722407403 13.1983238306972 13.6779537409228 13.7557170661492 13.0316864217597 12.9102712849222 9.19573411246882 11.2413216582939 11.6748265577845 8.38382407317743 11.5649607886042 11.8202393732929 13.1234011019407 12.6361819266668 13.8807231143630 14.1829030812639 7.65787804854878 0.117841895520754 0.115313163354335 0.113731383330438 0.111949228185197 0.117354533389022 0.119008252766400 0.112811485936201 0.111287923181893 0.127574651589184 0.110291390230067 0.109223875736701 0.114527848118226 0.110904739290113 0.110642069055974 0.109223875736701 0.109223875736701 0.116530846604648 0.110807320310462 0.131855952422072 5 5 + 23946293 23946588 23946432.727 23946197 23946970 + gene protein_coding_gene TRUE TRUE AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding lipid transfer protein 3 Identical to Nonspecific lipid-transfer protein 3 precursor (LTP 3) (LTP3) [Arabidopsis Thaliana] (GB:Q9LLR7;GB:Q9FIE6); similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.85762599102029 22.8129845402693 2.43379530792101e-10 1.16311077765545e-06 14.0648805634949 23.2047646836027 1.85762599102029 0.0297944833639835 AT5G57785_at 5.78309183901304 5.98587828104411 8.21100420101432 8.63304994696253 9.08817959925966 8.8033820017665 4.8938388130743 5.23324595478579 3.71653649238008 5.23199772912976 7.6900274253351 7.76278833701045 8.48846890492238 8.2853281719007 7.43205799952313 7.92700359312568 9.02077060054065 8.16408407813675 4.84203064753006 0.312625949277707 0.30658249858449 0.305667999129311 0.306955462958348 0.311048334229248 0.309891758555229 0.321868901676277 0.317933283363671 0.361000489817476 0.309638510479166 0.305836693778489 0.301805336187630 0.303182605192305 0.302784864244465 0.301805336187630 0.304206431822645 0.308470791682448 0.304581728849336 0.316217845452296 5 5 - 23426354 23426526 23426435.818 23426122 23426648 - gene protein_coding_gene TRUE TRUE AT5G57785.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 2.31118851996919 22.0366279018423 3.48632467267707e-10 1.66576592860510e-06 13.9807409297573 13.4255443771943 2.31118851996919 0.111556764202032 AT5G17300_at 6.48024879295034 6.65838999914178 7.18141528139174 7.49329373043185 7.31781041159439 7.66000262537167 9.25010248234447 9.27432818110532 7.60659445767084 7.97458976507949 4.38179330020048 5.57347916841819 7.54050614360823 6.39369559449431 3.73930943300037 8.63387436547872 8.63369465656072 5.13266420629994 8.22155371698386 0.187417217565256 0.180765812205752 0.178212707582523 0.174005862491960 0.174966035925148 0.174855544885429 0.178251481389208 0.174107358080112 0.181178316789113 0.177820800014509 0.18092338054579 0.173955469668217 0.173042170234764 0.179817195143029 0.186341177166773 0.169418433308285 0.175986652289019 0.180449777406912 0.169418433308285 5 5 - 5690439 5690837 5690682.182 5690229 5692904 - gene protein_coding_gene TRUE TRUE AT5G17300.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G37260.1); similar to putative At5g37260 [Lycopersicon peruvianum] (GB:AAX44338.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -2.08887302098912 -21.9119658296294 3.69761953679855e-10 1.76635285272867e-06 13.9665355949454 14.7583854822510 -2.08887302098912 0.0859517154552735 AT5G39660_at 5.2887696169259 5.64279984270544 5.04116610507743 5.01710260103566 4.97940777367126 5.16316579514959 6.49752040478903 6.38071614453835 5.67277835059371 5.83226882245388 4.58923589349658 4.81830360404301 4.88862656854353 4.6931971307449 4.3269530071534 5.97372898216654 6.09097367843038 4.66299495189965 6.65506301289503 0.224317494886122 0.218624690321897 0.230652293286985 0.221444581118399 0.218624690321897 0.222649717464235 0.221941751246235 0.224872211446487 0.226013802794359 0.226235598645635 0.222382930591335 0.220095690982160 0.218624690321897 0.231633082219583 0.252490530544579 0.224796912061707 0.226775936592974 0.232479009652009 0.230855190718069 5 5 + 15897402 15897902 15897635.818 15895927 15898272 + gene protein_coding_gene TRUE TRUE AT5G39660.1|AT5G39660.2 CDF2 (CYCLING DOF FACTOR 2); DNA binding / protein binding / transcription factor|CDF2 (CYCLING DOF FACTOR 2); DNA binding / transcription factor Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. Identical to Dof zinc finger protein DOF5.2 (AtDOF5.2) (DOF5.2) [Arabidopsis Thaliana] (GB:Q93ZL5;GB:Q9FK95); similar to CDF3 (CYCLING DOF FACTOR 3), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47500.1); similar to Zinc finger, Dof-type [Medicago truncatula] (GB:ABE80370.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -1.96020508041890 -21.5715701191116 4.34927855922467e-10 2.07721543988570e-06 13.9267086126461 11.0307669300069 -1.96020508041890 0.0720470230311884 AT5G35735_at 9.96987327525456 10.0459283197204 11.1282192488574 10.9630265379673 10.9279306336640 10.5958401783033 5.68485797023033 6.13535574026724 6.4119972795028 6.03437580836003 9.35959726224227 8.84712810207425 8.70689121391081 9.17294189091477 8.60509513411762 8.05788407291506 7.70796928559468 8.82625864711133 4.23174438010977 0.257228563411439 0.25258540357583 0.255284768297912 0.256184993250206 0.255494175896406 0.261473350198823 0.259279596422597 0.270467684529363 0.289831100618216 0.271909328156344 0.252202505472181 0.252202505472181 0.256272907627474 0.25876124217784 0.261422123555308 0.252202505472181 0.261569941721001 0.268080081648086 0.268801521884524 5 5 - 13918182 13918637 13918428.545 13917982 13920227 - gene protein_coding_gene TRUE TRUE AT5G35735.1 auxin-responsive family protein similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G47530.1); similar to putative membrane protein [Solanum tuberosum] (GB:CAC37356.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 2.14910620008328 21.2629510185890 5.04963225540775e-10 2.4111994019572e-06 13.8892353028863 16.5413005832502 2.14910620008328 0.101838709001291 AT5G35480_at 5.85327884083931 6.44711261453883 5.64279153224221 5.95574256799317 5.77570082581518 5.50130292165897 7.30948285282196 7.51839374546727 7.55926523016466 7.66084500747753 6.07524221775498 5.365152798699 6.15403849846949 6.38118825131148 5.32904294515821 6.96377595149048 6.95034761559789 5.51682036843883 7.76179222675916 0.218856414748341 0.220239503289623 0.221828908480527 0.219500299884553 0.216796718793012 0.230346129797386 0.223526427501921 0.225880713074979 0.230676741602957 0.21993181161254 0.222194908775342 0.218368523845286 0.223452390242784 0.223519639371952 0.253586724280581 0.224635290790211 0.226788619443430 0.221252199812188 0.228675667952374 5 5 - 13706674 13706759 13706709.455 13706434 13706788 - gene protein_coding_gene TRUE TRUE AT5G35480.1 unknown protein -2.36191265260100 -20.9233666718096 5.9656578030148e-10 2.84800503515927e-06 13.8464290609269 13.1267683555049 -2.36191265260100 0.130597794545355 AT5G54960_at 9.89666256380962 10.033007818192 11.1758310480982 11.2164376518302 11.486638778104 11.2958953590993 8.16063314567683 8.08121456340308 7.3066789145754 7.64019939068447 9.93099867150212 9.39482090273112 9.5753693763478 9.85658717339092 9.31056239958707 9.97351358551429 10.1917483134485 9.8099587792837 6.17338420041754 0.149552422941730 0.149642069475308 0.158878893558211 0.154505710550093 0.155340684506766 0.156327948946348 0.155446066463334 0.159394703231749 0.175615850263210 0.169094380672421 0.149552422941730 0.149552422941730 0.152267433403102 0.149552422941730 0.152466260820842 0.150483116698333 0.153658652469283 0.158962989288171 0.184339771513676 5 5 - 22328115 22328628 22328427.636 22327913 22329987 - gene protein_coding_gene TRUE TRUE AT5G54960.1 PDC2 (PYRUVATE DECARBOXYLASE-2); pyruvate decarboxylase pyruvate decarboxylase-2 similar to PDC3 (PYRUVATE DECARBOXYLASE-3), pyruvate decarboxylase [Arabidopsis thaliana] (TAIR:AT5G01330.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G33070.1); similar to pyruvate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT5G01320.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAL37492.1); similar to pyruvate decarboxylase 1 [Lotus corniculatus] (GB:AAO72533.1); similar to pyruvate decarboxylase [Fragaria x ananassa] (GB:AAG13131.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain Pyruvate decarboxylase/indolepyruvate decarboxylase; (InterPro:IPR012110); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766) 1.74335059582733 20.8259337056485 6.26092437064982e-10 2.98833920211116e-06 13.8338315921975 18.5660563170857 1.74335059582733 0.0434119921890824 AT5G22460_at 3.16297881075178 3.10412583016740 4.42732329350259 4.67910019313942 4.09502715469487 4.33184404633853 3.461932789952 3.59007012838623 3.25013583537813 3.07589102771596 8.39590954360742 8.36998269402253 6.23890119724129 7.45288225277613 9.06709181568305 7.77444965086288 6.01722109718409 8.31884795028983 3.93541971911254 0.260078856732366 0.254230121934947 0.259793991668059 0.253880941651677 0.256753103359555 0.262079801478584 0.256556118107785 0.257240961366084 0.274636931281839 0.257301899834649 0.257734608490454 0.259239363616250 0.262587465244379 0.263696801243613 0.254581029793563 0.256857845691893 0.260888279491860 0.255687336388209 0.258868462706733 5 5|0 -|/ 7443705 7444414 7444020 7443511 7445549 - gene protein_coding_gene TRUE TRUE AT5G22460.1|AT5G22460.2 esterase/lipase/thioesterase family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G74280.1); similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G36290.1); similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74300.1); similar to Os12g0152100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066173.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95828.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 1.78533844020699 20.1213795335346 8.9371843628467e-10 4.26482437795045e-06 13.738305166131 9.41899676550524 1.78533844020699 0.06460218869459 AT5G20630_at 9.9036879242457 10.3426610195688 0.407355801422373 0.723917738182595 5.94654693703036 6.0475477194696 4.81307502322885 5.17517827208363 2.84303748893312 3.36779993732706 6.78257791311751 9.33452829981518 4.61892161521082 5.19817220858041 8.63953209617795 5.93248413735878 1.06434597893714 3.82672787652604 4.97471013561626 0.333479639808602 0.334608645616651 0.362339586591491 0.353927233213402 0.324874285250903 0.330723707774979 0.32511249357824 0.324913016925434 0.329576858898155 0.329251225668622 0.331264208720494 0.326791011446421 0.328499396817854 0.326852318704930 0.328313212515424 0.329631242715099 0.343273977586879 0.330431512551259 0.330316598602932 5 5 - 6975357 6975829 6975601.545 6975106 6975995 - gene protein_coding_gene TRUE TRUE AT5G20630.1 GLP3 (GERMIN-LIKE PROTEIN 3); manganese ion binding / metal ion binding / nutrient reservoir Encodes a germin-like protein. Identical to Germin-like protein subfamily 3 member 3 precursor (AtGER3) (AtGLP2) (GER3) [Arabidopsis Thaliana] (GB:P94072;GB:P94028); similar to GLP1 (GERMIN-LIKE PROTEIN 1), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G72610.1); similar to Germin-like protein 1 precursor (GB:P45854); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) -2.10104707784065 -19.8431608509652 1.03195593774108e-09 4.92346177896268e-06 13.6983193714997 10.1215848642411 -2.10104707784065 0.114036163965737 AT5G63760_at 5.16270796851606 5.14347931339513 7.08073397718436 6.9877392079117 7.10116636058184 7.25140776388167 3.74488103323653 3.35094405539019 2.37137607309513 2.54779864118751 5.6136999720668 4.76015411089605 6.10647181691627 6.06571505522441 4.85048064219337 5.63176529189358 6.34640966411189 4.8676222234398 3.55177263136551 0.238729561471704 0.233282513203926 0.245571726904478 0.239978518528211 0.234884581885 0.236715113633757 0.239505277856214 0.234031175133135 0.250937740975128 0.246788092635929 0.233282513203926 0.235151983129206 0.239792292441577 0.241687313497024 0.242146955622191 0.233282513203926 0.241447199544064 0.238880301434758 0.239057411623604 5 5 - 25533118 25533869 25533558.2 25533104 25535059 - gene protein_coding_gene TRUE TRUE AT5G63760.1|AT5G63760.2 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to Zinc finger, RING-type; Zinc finger, RanBP2-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85988.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.80969085709881 19.7340714595970 1.09239497491963e-09 5.21072403036661e-06 13.6822715579771 9.9048519411666 1.80969085709881 0.0747901715113814 AT5G09440_at 7.64326034916878 8.36068901016098 10.7611568770137 10.9824141882550 11.0678153619523 11.1717051403661 6.29263555308362 6.69585530231149 3.86742032095519 5.28927441264743 8.04049624971101 6.06409902228196 8.54867411478178 8.24038427860308 5.27223283558273 7.66502498670789 7.99009235131094 7.8993571615968 4.89892348167961 0.283001028646020 0.281816697852954 0.302976717026858 0.304783847226832 0.304252726057668 0.301359536375567 0.281629627216584 0.278558018405031 0.323811064634257 0.294793697684265 0.278558018405031 0.286549550984244 0.287825321667669 0.282510455551085 0.299366503544367 0.278558018405031 0.293921766260824 0.282165231305650 0.314613563412934 5 5 + 2938649 2939154 2938844 2938348 2939462 + gene protein_coding_gene TRUE TRUE AT5G09440.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G64260.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 2.2942115099993 18.9614551215881 1.64913720950021e-09 7.8647353521065e-06 13.5622934397439 15.1970670712054 2.2942115099993 0.148569009608784 AT5G42760_at 3.14727261031277 3.05915849617458 4.90990120790223 4.86372411595948 3.53198483269868 3.43463593493102 7.13035262447341 6.92251591227432 4.2921803902538 4.98971993036163 3.46386676159863 3.30586312591686 4.39635727897801 3.94710442030106 3.56784409260733 5.6649717562486 4.90141129541446 3.57602799244941 4.64520720931296 0.251593039001078 0.237979983948128 0.231176213626646 0.235826870055218 0.231844564550013 0.234608973512068 0.248549614052462 0.24512847049448 0.237924123246524 0.239211855551362 0.234270321023094 0.231583794832938 0.232448764006192 0.239475740455321 0.236940315355063 0.234127528928349 0.241171344037346 0.233106300196287 0.239062102424960 5 5 + 17166789 17167297 17167088.636 17166151 17167514 + gene protein_coding_gene TRUE TRUE AT5G42760.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65019.1); contains InterPro domain O-methyltransferase, N-terminal; (InterPro:IPR003455); contains InterPro domain Protein of unknown function Mtu_121; (InterPro:IPR011610) -1.55592051032798 -18.5923152722354 2.01917518496160e-09 9.6274272818969e-06 13.5007988621274 8.99759322538185 -1.55592051032798 0.043287654288424 AT5G24160_at 7.70755603535134 8.14205120434125 9.568911585694 9.5798097715129 10.4036334102802 10.2460109177864 7.60742237690595 7.726283255709 4.63569175184284 5.62715513029529 8.26200352236031 7.54676442194498 8.76468337220823 8.72542902699662 7.70053824927642 7.63010958957712 8.77444713538535 8.71303010732791 4.86298099735749 0.213438456463959 0.210439393778670 0.207429889045735 0.206897727247149 0.208776173173958 0.207889229966524 0.208555954200896 0.213620834582521 0.232061725541192 0.233135736077156 0.207341484690576 0.209643043079766 0.208467151929125 0.206746611678731 0.211229084762551 0.207182630593928 0.208119918854239 0.204488258848249 0.225500628719421 5 5|0 -|/ 8183315 8184020 8183683.556 8183078 8186643 - gene protein_coding_gene TRUE TRUE AT5G24160.1 squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) Identical to Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene epoxidase 1,2) (SE 1,2) (SQP1,2) [Arabidopsis Thaliana] (GB:O65402); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 1.73822912791325 18.4511996967407 2.18383606698941e-09 1.04103465313385e-05 13.4765292161188 15.5259939720142 1.73822912791325 0.082610282685485 AT5G17760_at 5.60530953634399 5.55062857958923 7.99574204941981 8.29173413268386 5.70595868371024 6.06582543515686 2.19466249748676 2.20054494186330 1.70603041569879 1.67569052113703 3.24444044949381 3.39118290208577 3.45584702644867 3.06523572275323 2.57869344738071 3.04979732908188 3.47369105545384 4.03270798281149 1.36525493833867 0.288756702271889 0.291849604723919 0.284969814816765 0.283774698215710 0.288092721098906 0.294400128355713 0.283774698215710 0.283774698215710 0.284672044775354 0.302880591518676 0.283774698215710 0.283774698215710 0.288229310819128 0.286927058433775 0.283774698215710 0.283774698215710 0.283774698215710 0.288513577653701 0.295312839215215 5 5 - 5861298 5861752 5861510.182 5860423 5862424 - gene protein_coding_gene TRUE TRUE AT5G17760.1|AT5G17760.2 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959)|similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37997.1); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 1.68708043330096 17.9973021776002 2.82111310402687e-09 1.34454250537921e-05 13.3954618019940 7.8856881226135 1.68708043330096 0.0811956553328696 AT5G59680_at 6.67667358801139 7.00594581253468 7.0889191994146 7.0126565880357 6.37021312287382 6.33255946942066 3.74137630467607 3.587811514251 7.26217795004544 5.47595267247385 3.13459190163108 3.2731013136045 3.86636703653991 4.85306622189624 2.52622024395079 4.65085398322015 4.30457749355056 4.30197887724331 6.66896318819239 0.265825376238627 0.261911304251387 0.261598534336150 0.265731596549564 0.262542758298370 0.262448143510703 0.26745926427457 0.270314645715599 0.270343690345597 0.261598534336150 0.269546561980679 0.261598534336150 0.274898973775040 0.265251372125593 0.273369305392957 0.261598534336150 0.269554206617618 0.267367971314486 0.268154284204588 5 5 + 24067464 24067971 24067779.455 24064018 24068027 + gene protein_coding_gene TRUE TRUE AT5G59680.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59670.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90328.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.56905678690055 -17.685344065872 3.37590179021038e-09 1.60861720303524e-05 13.3369565102512 11.1434574019981 -1.56905678690055 0.0645742356116711 AT5G51570_at 8.31972082165833 8.33126605139633 8.87043894217112 8.88163656722587 9.13464218537122 8.87089877984937 4.39739258762318 4.47481837414308 3.74535951423889 3.92720875655377 6.60632219216201 6.34710136147425 6.02141758092585 6.83365889798142 6.08774029185188 5.49078868050739 6.91796096867216 5.72990198672026 3.52605087480862 0.279352538859832 0.282718234906771 0.276673493668713 0.284721707357399 0.277725518843523 0.285985933125959 0.277236873143798 0.276638674067916 0.285413030669408 0.289197663591571 0.276443863003735 0.285079195075012 0.280332481311839 0.280065542864199 0.276443863003735 0.277210314558082 0.285643048399074 0.276443863003735 0.290533641611411 5 5|0 +|/ 20967279 20968433 20968007.3 20966630 20968723 + gene protein_coding_gene TRUE TRUE AT5G51570.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT5G62740.1); similar to Os06g0136000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056723.1); similar to hypersensitive-induced reaction protein 4 [Hordeum vulgare subsp. vulgare] (GB:AAN17454.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 1.49509446092357 17.6772379817027 3.39182154061202e-09 1.61586378194757e-05 13.3354047278275 12.6537190604651 1.49509446092357 0.0476494681889597 AT5G57220_at 4.38005740370082 5.16984743993366 8.5043623921378 8.61057275536894 9.05939123202631 8.54797272979125 1.99891150972582 1.65529561979154 3.78271914437781 2.69631792557470 3.59057115555419 7.72698061372539 2.50138110418810 4.77316137581336 4.73985817259147 2.50584527427419 3.61020980177412 3.39707593859581 2.52192771198513 0.275243831072700 0.273189748277187 0.285506980375604 0.281677245401644 0.279787249881148 0.278314478394705 0.280847297292816 0.276236468793538 0.269514023679598 0.28187552966426 0.269514023679598 0.280256299319303 0.280135275170299 0.271513902198221 0.283834165182410 0.274245288547784 0.286849656566895 0.277867251124897 0.275572342681567 5 5 + 23206310 23206876 23206609 23205066 23207083 + gene protein_coding_gene TRUE TRUE AT5G57220.1 CYP81F2 (cytochrome P450, family 81, subfamily F, polypeptide 2); oxygen binding member of CYP81F similar to CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37430.1); similar to CYP81F3 (cytochrome P450, family 81, subfamily F, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37400.1); similar to CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37410.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 2.34870001006223 17.6128459872293 3.52123290875092e-09 1.67716323443807e-05 13.3230199466489 9.54377989708141 2.34870001006223 0.174319373061222 AT5G45840_at 2.80930127196256 3.22426051844515 3.01400654087623 3.04371144030176 2.49223787477022 2.38275551184782 6.07231945141543 5.65153286749472 4.29499632173119 4.32009376133848 3.42182281375553 2.84194316421689 3.41326516056436 4.16319012319441 2.76808508549804 3.53163752917846 4.55171853622893 2.79474081130149 3.40183735668447 0.249041207366307 0.246260925597074 0.248274484043362 0.240982437726668 0.240982437726668 0.246805791759714 0.246173593997731 0.25625907062263 0.260717937540711 0.246296674643188 0.245633758368186 0.246229707478889 0.244350940915908 0.241133768952950 0.247662399096514 0.243103839305344 0.257120390879057 0.247141235478082 0.240982437726668 5 5 - 18611309 18612086 18611757.091 18611307 18614448 - gene protein_coding_gene TRUE TRUE AT5G45840.1 leucine-rich repeat transmembrane protein kinase, putative similar to MRH1 (morphogenesis of root hair 1), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G18640.1); similar to transmembrane kinase [Oryza sativa (japonica cultivar-group)] (GB:AAQ01158.1); similar to Os01g0206800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042346.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.78531896154095 -17.5108927244730 3.73729099850557e-09 1.77969797348835e-05 13.3031983543786 7.30698712609439 -1.78531896154095 0.104138265515721 AT5G02540_at 3.99054990541454 4.10529789218698 2.16540819686940 2.06757015715114 2.97283122797674 2.60832233290088 1.80729288552186 2.17725541626586 9.77706586470333 5.51663995872347 8.95434301597845 8.89190927141359 5.13886927878576 4.63734191131853 10.3345384199724 5.57207445785845 2.64810509023586 5.99604965823432 7.39391135275471 0.275613394819399 0.268633899156296 0.272043914907454 0.272517642244762 0.265266923522676 0.282635748829346 0.277762696222271 0.279281196756958 0.277644426284098 0.280571587274704 0.270809633479375 0.266124327562356 0.26476117355054 0.268414472684544 0.268230007834855 0.266404860546767 0.281846041212879 0.276394439166019 0.270740552904214 5 0|5 /|+ 569764 570688 570231 568522 570918 + gene protein_coding_gene TRUE TRUE AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT2G37540.1); similar to putative pod-specific dehydrogenase SAC25 [Brassica napus] (GB:CAB58175.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -1.71570468360702 -17.5050866160484 3.75002345075755e-09 1.78538616490567e-05 13.3020616277785 9.77891247513684 -1.71570468360702 0.0935901623425344 AT5G22630_at 5.41451950115192 5.4845045456432 8.93264710957 8.8736907367921 7.4617602271647 7.72908656290659 5.40212771268017 5.64571901790254 5.5139705154249 4.74183839233915 7.55281815096734 7.51383430980604 7.59128515734147 8.0773447940588 7.11520378417963 7.60698109374116 8.5407386849831 7.4915940247024 5.52709910357862 0.204260364266095 0.198647095689231 0.204974543358744 0.207749725002614 0.197725317435069 0.196825615232292 0.205888491746653 0.199724095962751 0.205905521479405 0.208421100343045 0.193365481588467 0.201404150239344 0.194728186384785 0.197646658136128 0.201362799987649 0.199837689782527 0.199044925341510 0.202867626836073 0.200793662635989 5 5 + 7525350 7525884 7525596.091 7524345 7526163 + gene protein_coding_gene TRUE TRUE AT5G22630.1 prephenate dehydratase family protein similar to prephenate dehydratase family protein [Arabidopsis thaliana] (TAIR:AT3G44720.1); similar to prephenate dehydratase [Ipomoea trifida] (GB:AAS79603.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086) 1.54949600854112 17.4656504293672 3.83776784289881e-09 1.82677749321983e-05 13.2943180233835 13.3416040952698 1.54949600854112 0.0645597938728607 AT5G10140_at 1.25889339915248 1.52413862995114 2.74741229869700 2.57722232049192 1.80627304132546 2.33853261052234 1.09751737036176 1.47309165361851 1.77603183816598 2.37777772449337 8.82265220079692 9.1184442023034 5.34732672134083 3.72407764089235 6.32619978950423 1.95117534155053 2.48640032476687 5.95836504752246 1.80416966749449 0.269112941948264 0.2665492953505 0.265969952991051 0.272135964624169 0.274121631782743 0.276410157662309 0.268254160682998 0.274125821673558 0.279580917056504 0.263804000386682 0.287573469674167 0.283365333494732 0.283251729951855 0.267516132916076 0.281792895339736 0.275992043035238 0.28134883099562 0.279546252226997 0.263804000386682 5 5|0 -|/ 3173757 3179276 3176250 3173498 3179449 - gene protein_coding_gene TRUE TRUE AT5G10140.1|AT5G10140.2 FLC (FLOWERING LOCUS C); transcription factor|FLC (FLOWERING LOCUS C) MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex. Identical to FLOWERING LOCUS C protein (MADS-box protein FLOWERING LOCUS F) (FLC) [Arabidopsis Thaliana] (GB:Q9S7Q7); similar to MAF1 (MADS AFFECTING FLOWERING 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77080.4); similar to flowering locus C [Thellun (GB:AAY34137.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 1.89149426274347 17.1080892107215 4.74390096912741e-09 2.25762247120774e-05 13.2222586871249 5.5792967831664 1.89149426274347 0.125231800204515 AT5G13320_at 6.62071009585105 7.1747137218336 10.338313859626 10.4747974598435 7.80290591520339 7.28942175916854 2.83104345330801 3.0486337340592 3.38870005764116 3.67800632480888 5.24718891161337 5.14048890789158 5.90689869534318 5.25353499518171 4.38843188848383 7.0045579382528 5.34507440862733 5.31954096147769 3.51351648590193 0.239067303797603 0.241367932633696 0.237963633482136 0.237963633482136 0.237963633482136 0.252685273806902 0.237963633482136 0.248881142957817 0.243790842506091 0.242316988609531 0.237963633482136 0.237963633482136 0.237963633482136 0.245287621510521 0.238464688253064 0.239081550998482 0.241720982682438 0.237963633482136 0.239029439334757 5 5|0 +|/ 4270208 4270799 4270536.8 4267513 4271054 + gene protein_coding_gene TRUE TRUE AT5G13320.1 PBS3 (AVRPPHB SUSCEPTIBLE 3) signaling gene in disease-resistance involved in restricting the spread of both virulent and avirulent pathogens similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48660.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G51470.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 1.98611114612494 17.0925603293543 4.7882228479523e-09 2.27823643105570e-05 13.2190519636613 11.4362952720998 1.98611114612494 0.138071086238244 AT5G17650_at 7.68442240836174 7.85036969955783 10.4989207929463 10.4233563874110 9.95981380066942 9.76815220373574 9.09777835474515 8.91829018008503 5.79591356531642 7.32909037067482 8.62266501130531 8.01556466050265 9.5505761978719 9.3082379537367 8.69466910076253 9.68011501076937 10.3175086447784 9.22955312381846 5.87156248143254 0.174543747727051 0.175731412332562 0.176400302958457 0.175230779828688 0.176568918071835 0.180450125348983 0.176546184351903 0.176176581027500 0.241690069034687 0.190135092480175 0.177699240731549 0.182361096883543 0.172373355086099 0.172373355086099 0.172373355086099 0.174897304839482 0.178560281973317 0.177578109466880 0.215494669944684 5 5|0 -|/ 5817104 5817710 5817447.6 5816700 5818349 - gene protein_coding_gene TRUE TRUE AT5G17650.1 glycine/proline-rich protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G45350.2); similar to Unknown (protein for MGC:12025) [Mus musculus] (GB:AAH05782.1) 1.47033951813064 17.0325553105789 4.96378256441479e-09 2.36127136589211e-05 13.2065990754714 17.0299129878146 1.47033951813064 0.0553230224770817 AT5G17420_at 1.52967563370167 1.32109608553996 4.36636422039562 4.32731224022755 3.40721599445723 3.60749134768492 1.98518868713862 2.00479281465802 2.16060809200871 2.13183396466769 2.74590338454096 3.72932442769665 3.29737950954346 3.50973293705678 4.19099967559652 2.96396677982249 6.64506846489117 4.19983416961625 2.86988872749002 0.226349304332624 0.227282800114772 0.23009094834128 0.228894361525118 0.226504506218835 0.21976391026063 0.225033472042336 0.218009655866459 0.220108145330246 0.223242574228306 0.222696555635247 0.226322646033822 0.218477897932835 0.22334417682936 0.221292683985663 0.22587772254538 0.232960922749971 0.225387311561108 0.218843040414641 5 0|5 /|- 5736879 5737416 5737158.9 5736632 5741467 - gene protein_coding_gene TRUE TRUE AT5G17420.1 IRX3 (IRREGULAR XYLEM 3, MURUS 10); cellulose synthase encodes a xylem-specific cellulose synthase Identical to Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) (CESA7) [Arabidopsis Thaliana] (GB:Q9SWW6;GB:Q9XHP6); similar to CESA2 (CELLULASE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to cellulose synthase 3 [Eucalyptus grandis] (GB:AAY60845.1); similar to Zinc finger, RING-type; Cellulose synthase; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE78816.1); similar to cellulose synthase [Populus tremuloides] (GB:AAM26299.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.44160556853626 16.9153175881350 5.32741180348576e-09 2.53371705373783e-05 13.1819822407783 5.96750200963429 1.44160556853626 0.050609251046097 AT5G35490_at 8.98816722096307 9.26501648423753 8.14980911892333 8.34447194685779 8.63737502328115 7.64432186800096 10.9244771286917 10.7741917143845 9.7523982697928 10.8413058140904 8.84416968175436 8.80812561382695 8.54321364498947 9.74255999344598 8.60170719419791 10.2718293653327 9.74322763387978 8.32687730653887 10.7814800622600 0.217899176984520 0.217142729508093 0.231576738252176 0.226521576985248 0.215292660425633 0.235643909566319 0.22321682106154 0.219911397346615 0.218929404403662 0.221155638593771 0.217228278292611 0.215292660425633 0.219637562199341 0.215292660425633 0.225709852791177 0.229474420555654 0.22636148104646 0.232547156908313 0.220912171493480 5 5 + 13707468 13707637 13707563.333 13707047 13707778 + gene protein_coding_gene TRUE TRUE AT5G35490.1 unknown protein -2.29391057741562 -16.6364094104410 6.31489851295856e-09 3.00273424291179e-05 13.1218574684419 18.8752830729809 -2.29391057741562 0.183411771835614 AT5G26570_at 9.95845837380043 10.0323581298725 10.3115654017271 10.3452410931300 11.0035239588910 10.6189236050087 8.52750103972108 8.55978129577128 5.34902521703883 7.40445014538367 9.65086120051 9.58183001752777 9.64914340987083 9.654707341547 10.0170831996566 9.34307391758564 9.75181142758938 9.87102074312328 6.65301531053544 0.113592254337421 0.116043309436999 0.124109617137058 0.119075723483597 0.117054894806481 0.125077699453892 0.122601826013268 0.120399919463501 0.172137934996789 0.138260366381718 0.117975100555407 0.113592254337421 0.11801087993289 0.117021700911096 0.117500057733993 0.113592254337421 0.124548671684754 0.116921546954993 0.133782916859209 5 5 + 9266983 9267504 9267175.909 9261583 9267732 + gene protein_coding_gene TRUE TRUE AT5G26570.1 PWD (PHOSPHOGLUCAN WATER DIKINASE); catalytic chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position. Identical to Phosphoglucan, water dikinase, chloroplast precursor (EC 2.7.9.5) (GWD3) [Arabidopsis Thaliana] (GB:Q6ZY51;GB:O81504;GB:O81505;GB:Q5XMK9;GB:Q84TI8); similar to SEX1 (STARCH EXCESS 1) [Arabidopsis thaliana] (TAIR:AT1G10760.1); similar to Os12g0297500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066613.1); similar to chloroplast alpha-glucan water dikinase isoform 3, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21981.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) 1.48624804253761 16.5587792022185 6.62410196492412e-09 3.14909807412492e-05 13.1047211423138 17.9990549279881 1.48624804253761 0.0682534863020187 AT5G53710_at 2.43929511253510 2.79659903003748 5.8156780386138 6.00752522599812 8.10604656910958 7.91586616787573 4.62797617922568 4.93316237214644 3.8165917508116 3.61248642223553 5.67159059464662 3.65453648499011 4.47918300119968 6.17439045975652 4.5866831164117 3.66111977696766 5.52940038535202 5.92405305816299 2.32099081558154 0.251797658070169 0.251965784543517 0.255154085728676 0.252160433504404 0.249378271751852 0.248252088453178 0.249287831792591 0.253114388430654 0.246805184948295 0.246805184948295 0.248658997527701 0.254712597872648 0.246805184948295 0.24840817338539 0.246805184948295 0.247130946636746 0.264603622901055 0.25681845308508 0.255228168146838 5 5 - 21822640 21822935 21822782.455 21822485 21823020 - gene protein_coding_gene TRUE TRUE AT5G53710.1 unknown protein 1.60129056050894 16.3252322634610 7.65835577142014e-09 3.64001649815599e-05 13.0520784462896 9.43533988989047 1.60129056050894 0.0937979633769476 AT5G25570_at 1.64371210778434 1.62926433120808 2.82154774143932 2.90991669612663 3.24627094322631 3.46085472084098 1.59562632956873 1.42794701871314 1.12439678344887 1.19444589386679 3.11366826788287 2.91111252408595 3.04302420241082 3.03323670450764 2.73227788516955 2.79000013683961 2.63062830456227 2.65997463246287 1.36754093675382 0.215608152366038 0.215443960629013 0.217150898873726 0.217482918601318 0.216520495351969 0.224172910742458 0.218208228164549 0.221901205044079 0.217246928261353 0.222978128565549 0.221185840691864 0.220648278780037 0.215455997853740 0.215443960629013 0.225800959468866 0.22539634336444 0.229761477611597 0.220484749645951 0.218432571949224 5 5|0 +|/ 8901835 8902868 8902266.111 8901744 8903219 + gene protein_coding_gene TRUE TRUE AT5G25570.1|AT5G25570.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83630.1) 1.37963077710786 16.2304898763659 8.12709629121121e-09 3.86199615758357e-05 13.0302464389013 4.38840992124512 1.37963077710786 0.0496097828265787 AT5G59310_at 3.27246855739377 3.28281730896273 7.27435657177273 7.832951643397 11.1071467952284 11.1500115522863 7.2390106194164 7.15448767030933 1.91276308237684 8.08430296932905 4.00995697560340 2.30668680106403 3.65972460433983 3.93867640657133 6.02884583489397 6.19688066641352 7.91532831422464 8.30620876722767 2.44768260485377 0.396754674969860 0.392887778964479 0.39589049567445 0.392887778964479 0.407352073709049 0.40882975130281 0.392887778964479 0.395234645730447 0.41415881331818 0.396695353482993 0.40001674535796 0.402568931660751 0.395273753755638 0.405638781226554 0.392887778964479 0.392887778964479 0.402569627076321 0.392887778964479 0.412563555564644 5 5 - 23942735 23942958 23942846.182 23942311 23943078 - gene protein_coding_gene TRUE TRUE AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Identical to Nonspecific lipid-transfer protein 4 precursor (LTP 4) (LTP4) [Arabidopsis Thaliana] (GB:Q9LLR6;GB:Q9FIE7); similar to LTP3 (LIPID TRANSFER PROTEIN 3), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59320.1); similar to lipid transfer protein 4-like protein [Thellun (GB:AAM19702.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.5956554164681 16.0122592758004 9.33037942938155e-09 4.43286326689917e-05 12.9788795914785 12.0109253890853 1.5956554164681 0.0980652189286256 AT5G58310_at 2.30192181313488 2.33946915658076 1.65673836324798 1.60248230309682 2.02991735335272 1.29251528217888 6.51209474119594 7.08747567702903 4.24197566283451 5.23992910041819 3.47656674993294 4.36797471601546 2.98568352991092 4.73084751313722 5.91307243935019 6.8086106884241 4.08820157784773 4.00555802256795 3.3489455412121 0.248973614100503 0.242474243460070 0.248309065763653 0.242277514972233 0.242997007152410 0.241507725785067 0.256232558934671 0.258736740833925 0.242820817155914 0.246903231164941 0.241753756743507 0.241182668757560 0.242298190689311 0.241182668757560 0.258457250607312 0.248162539247200 0.254887512304404 0.242550924527625 0.242493284213445 5 5|0 -|/ 23592379 23592994 23592676.6 23592218 23593310 - gene protein_coding_gene TRUE TRUE AT5G58310.1 hydrolase, alpha/beta fold family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT4G16690.1); similar to hypothetical protein [Capsella rubella] (GB:CAC82615.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) -2.00174061387992 -15.7035918281664 1.13767793280908e-08 5.40397018084314e-05 12.9035661267123 7.51483408929542 -2.00174061387992 0.162263878354649 AT5G61380_at 8.64572276461965 8.37842612065829 9.16142787897321 8.85216664725696 9.53369511491726 9.55874040230773 3.89550411419174 3.78993284388393 4.44367044825854 4.1502421772951 5.41516423773872 6.07941976754599 5.97596587275917 6.38453988008643 5.85795732381111 6.10408453523871 6.4233389488778 6.13554797396482 4.04105569200199 0.246234824554589 0.241602186652022 0.245894113279670 0.243834985123397 0.245474782194289 0.246862879932185 0.240913627257521 0.255580087188827 0.245426162033377 0.265209452011461 0.239900539702332 0.238575878144012 0.238575878144012 0.238575878144012 0.240859474526820 0.23919705621116 0.242348909297312 0.240046447428621 0.253257134762243 5 5 + 24694841 24695357 24695054.909 24692313 24695776 + gene protein_coding_gene TRUE TRUE AT5G61380.1 TOC1 (TIMING OF CAB1 1); transcription regulator pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Two-component response regulator-like APRR1 (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) (APRR1) [Arabidopsis Thaliana] (GB:Q9LKL2;GB:Q9M4B7); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to timing of CAB expression 1 protein [Castanea sativa] (GB:AAU20772.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 1.4210595007835 15.5793935071144 1.23342816783421e-08 5.85755036904467e-05 12.8723504767013 12.8562811975285 1.4210595007835 0.07318853179925 AT5G20230_at 10.7283623967267 10.8065776264062 12.0766328380819 12.1030727581593 11.4467012668742 11.2815054482789 5.03743928508946 4.22324711747397 8.14039950239077 5.573954802423 8.50142326985686 8.95206131058106 5.34698578597075 8.48164634923527 9.04007157279254 5.63299568818702 6.32903822393651 7.57362005819908 4.46718563286952 0.258035975242844 0.256204477668362 0.257474242527532 0.257713790547683 0.258252369910014 0.258192441834489 0.260753692258913 0.266320381758915 0.263544381214553 0.270003329114724 0.257345303796598 0.253572478899284 0.266125131099556 0.258722500905450 0.253572478899284 0.266055614534911 0.262048570020659 0.258884344308357 0.272796079395428 5 5 + 6826720 6827343 6827061.364 6826508 6827601 + gene protein_coding_gene TRUE TRUE AT5G20230.1 ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding Al-stress-induced gene Identical to Blue copper protein precursor (Blue copper-binding protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) (BCB) [Arabidopsis Thaliana] (GB:Q07488;GB:O82664); similar to UCC3 (UCLACYANIN 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT3G60280.1); similar to Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form (GB:1X9R); similar to Umecyanin (UMC) (GB:P42849); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 1.84661869163972 15.5039652960638 1.29584722796680e-08 6.15268263838635e-05 12.8531297981010 16.4843141395893 1.84661869163972 0.144478905718428 AT5G01240_at 7.1430381974327 7.16456227208895 5.63668099666322 5.70359013495248 7.11118736256784 6.94381094562896 7.00738228211767 7.05061203817204 8.40180575151898 7.83965474390029 8.64725600057713 8.960866302693 8.612075110508 8.33538100599061 8.412694399731 8.37400169259636 7.49257486394716 8.03244032599191 8.2703326191843 0.181094028154693 0.181349664244511 0.214497240555169 0.227041433798241 0.176531485341241 0.193325029127391 0.181689543966364 0.180381583144622 0.181641436073405 0.174659499515934 0.175660969816336 0.181612198067594 0.183052823190815 0.179954860459180 0.174446260543287 0.179468333002057 0.186971318638232 0.183420695545713 0.180822053903205 5 5|0 +|/ 100643 101431 101040.1 97893 101834 + gene protein_coding_gene TRUE TRUE AT5G01240.1|AT5G01240.2 amino acid permease, putative Identical to Auxin transporter-like protein 1 (AUX1-like protein 1) (LAX1) [Arabidopsis Thaliana] (GB:Q9LFB2;GB:Q9SMW2); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT2G21050.1); similar to AUX1 (AUXIN RESISTANT 1), amino acid permease/ transporter [Arabidopsis thaliana] (TAIR:AT2G38120.1); similar to amino acid permease, putative [Arabidopsis thaliana] (TAIR:AT1G77690.1); similar to Auxin transporter-like protein 4 (AUX1-like protein 4) (MtLAX4) (GB:Q8L884); similar to AUX1-like auxin influx carrier protein [Pisum sativum] (GB:BAC98948.1); similar to Auxin transporter-like protein 2 (AUX1-like protein 2) (MtLAX2) (GB:Q9FEL7); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -1.26041498531283 -15.4107759527709 1.37776611975094e-08 6.5402557704577e-05 12.8291044299897 14.9846124875141 -1.26041498531283 0.0322939641516316 AT5G47220_at 8.36913095180406 8.74640653784102 10.5947908158364 10.7258372454160 9.69550212761319 8.88289975178616 4.40671400025203 4.80794916073169 4.79952778106345 3.45300144244685 6.63604466554067 6.60958823218586 6.61001137027965 7.84139165947499 5.78426139143056 8.34704048079499 6.84142896894716 5.77629698211162 4.05504597053266 0.242218681986054 0.242218681986054 0.242218681986054 0.242218681986054 0.244264466715452 0.2557442270705 0.248421498109959 0.244263851450137 0.253285768266409 0.247401046294071 0.250113593801295 0.244195367761328 0.242218681986054 0.242218681986054 0.243692147744547 0.242218681986054 0.248359761111492 0.242328146047442 0.254861858171892 5 5 - 19189306 19189790 19189612.636 19189089 19190050 - gene protein_coding_gene TRUE TRUE AT5G47220.1 ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2); DNA binding / transcription factor/ transcriptional activator Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. Identical to Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (AtERF2) (ERF2) [Arabidopsis Thaliana] (GB:O80338;GB:Q8LBU9); similar to ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G17500.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD65036.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 2.00913684650349 15.231478169543 1.55172937882973e-08 7.3645076319259e-05 12.7819951725371 13.7327953406734 2.00913684650349 0.171387236387661 AT5G56870_at 9.41954446546259 9.62695606764894 10.39169661833 10.1242320692697 11.2155550265478 11.0934615312203 6.56979439169407 6.43435811437699 7.83147532725276 6.67902276519253 8.13541486298182 8.78667013772668 8.78040421671882 9.00359283257916 8.06160487330471 9.28548806586169 9.75750342776879 8.5522297867954 6.88981535773429 0.200166347945583 0.203486609483932 0.204308921088049 0.205305005142728 0.209592685239974 0.204595415748283 0.210493352354638 0.208331771877327 0.220518108018382 0.232565636491056 0.218884216202466 0.200166347945583 0.200166347945583 0.210350636060396 0.206682837770191 0.200166347945583 0.202577928776437 0.205374205432408 0.227660005824925 5 5|0 +|/ 23024811 23025595 23025284.556 23021422 23025875 + gene protein_coding_gene TRUE TRUE AT5G56870.1 beta-galactosidase, putative / lactase, putative similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT3G52840.1); similar to BGAL12 (beta-galactosidase 12), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G26140.1); similar to pear beta-galactosidase1 [Pyrus communis] (GB:BAE72073.1); similar to beta-galactosidase [Pyrus communis] (GB:CAH18936.1); similar to beta-galactosidase precursor [Carica papaya] (GB:AAC77377.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 1.35760078120646 15.2085035423612 1.57569957584957e-08 7.47669448740621e-05 12.7758732368058 17.3238504566656 1.35760078120646 0.0665319597819912 AT5G22570_at 4.4153345601545 4.22301159600217 9.06258521472237 9.12825337546882 5.01761728471625 4.52901547629596 1.25089884446032 1.55671588624888 2.06310417235958 1.79662108061238 1.31680812491937 1.79942431341511 1.34205880703633 2.00793685376492 1.44893750500783 1.95132399793265 1.90026853345322 2.45149185572534 1.17731515451768 0.243447264072743 0.232188600014722 0.233898878739026 0.224393536784481 0.222872370686352 0.242390295058213 0.220967170053375 0.222480385074242 0.218569147485786 0.216494949419311 0.221399037742827 0.219941987531294 0.217628181249181 0.216494949419311 0.219000099663225 0.216738893814953 0.220538982854782 0.218990393093059 0.230965957876304 5 5 - 7495631 7496247 7495892.636 7495542 7496787 - gene protein_coding_gene TRUE TRUE AT5G22570.1 WRKY38 (WRKY DNA-binding protein 38); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 38 (WRKY DNA-binding protein 38) (WRKY38) [Arabidopsis Thaliana] (GB:Q8GWF1;GB:Q9FK82); similar to WRKY62 (WRKY DNA-binding protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT5G01900.1); similar to DNA-binding protein 4 [Nicotiana tabacum] (GB:AAF61864.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.55278363351103 15.1361586503698 1.65385571056040e-08 7.84589149089855e-05 12.7564669673552 6.62607638879369 1.55278363351103 0.105769705257934 AT5G39030_at 7.28172105822626 7.56214292410156 7.79184219965597 7.584997097195 7.31812667132224 7.17015431821237 7.04375142629095 6.79445058058665 6.72559183055569 6.56522058721528 5.1609489482339 5.26689694291679 6.19741774266431 5.85865651659514 4.90980490716336 6.13059978697142 6.3821404384251 5.4649683804782 6.73512842171009 0.223281803277137 0.209017960366301 0.223315847423014 0.218794733695761 0.215637939940856 0.223061883970817 0.215039719465313 0.212101667010599 0.21466848685205 0.21083575237395 0.220742615934672 0.220963390644712 0.211136389248487 0.213160723770515 0.213181125803175 0.215524621260460 0.227512599604645 0.213918494718261 0.214698872584101 5 5 + 15639186 15639683 15639512.636 15637296 15639716 + gene protein_coding_gene TRUE TRUE AT5G39030.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39020.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39000.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38990.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.39668554638795 -15.0423034309219 1.76161489310004e-08 8.35533943797348e-05 12.7309959278636 13.4917696949946 -1.39668554638795 0.078443227789016 AT5G65640_at 3.19745861721341 3.28045899004436 3.80463341798595 4.37716125047504 5.74311087201052 5.40971064057552 4.30629180926674 4.40190636546012 2.85288764025046 3.35879969445065 6.35665587546851 7.34183832310745 6.75609279842725 6.51201858657002 7.6967732849328 7.46120244365963 7.02527854741182 7.58513113043024 3.22326987153951 0.30965320969564 0.294015113368413 0.292618021920075 0.289417177051080 0.288617913032738 0.304240075321654 0.288617913032738 0.295234050301217 0.306234470662496 0.29301198061347 0.291673041861889 0.294053362061503 0.29420265756977 0.291606160639186 0.30139107754284 0.291427659312723 0.3027310050365 0.297193968915712 0.288617913032738 5 5|0 +|/ 26254881 26255910 26255494.7 26254285 26256310 + gene protein_coding_gene TRUE TRUE AT5G65640.1|AT5G65640.2 BHLH093 (BETA HLH PROTEIN 93); DNA binding / transcription factor|BHLH093 (BETA HLH PROTEIN 93) similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G10570.1); similar to Os03g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048889.1); similar to Putative bHLH transcription protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05491.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.60739054657393 15.0242955513458 1.78315333539176e-08 8.45571311642771e-05 12.7260703736893 9.4335212999612 1.60739054657393 0.116728550662039 AT5G44210_at 3.94214879290379 4.61494965672607 5.09343993167199 5.7820523634843 6.45303109490365 6.61183310397831 2.60689658984227 2.63196218465802 4.05296136014618 3.08770904441914 6.97033885178084 6.15895617957165 7.16333074856903 7.0856788723128 6.1636672666504 6.26706628584445 6.58180396798146 6.80723330858482 3.17494307139309 0.263144784097052 0.255077008429189 0.257336559569127 0.252762217031470 0.251023929519311 0.264963746851314 0.270643357708188 0.265468123511613 0.255066444220669 0.266659801088609 0.253820112705456 0.252380893704409 0.25017342571413 0.259891258359453 0.251195865822447 0.255519942080342 0.263068157402521 0.259353513849703 0.256475834058922 5 5 + 17824084 17824530 17824305 17823699 17824761 + gene protein_coding_gene TRUE TRUE AT5G44210.1 ATERF-9/ATERF9/ERF9 (ERF domain protein 9); DNA binding / transcription factor/ transcriptional repressor encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Identical to Ethylene-responsive transcription factor 9 (Ethylene-responsive element-binding factor 9) (EREBP-9) (AtERF9) (ERF9) [Arabidopsis Thaliana] (GB:Q9FE67); similar to ATERF10/ERF10 (ERF domain protein 10), DNA binding / transcription factor/ transcriptional repressor [Arabidopsis thaliana] (TAIR:AT1G03800.1); similar to ethylene-responsive element binding protein ERF4 [Gossypium hirsutum] (GB:AAX07461.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.96299245942906 15.0197358962082 1.78865238903689e-08 8.4800009764239e-05 12.7248212293269 9.76118784501175 1.96299245942906 0.168911852365963 AT5G27920_at 5.09102274045751 5.4551769100578 4.76005134194309 4.39146085713458 4.12891812023739 4.00858845207004 3.51329405959499 3.58151439375413 6.43529174731565 4.49990848544538 3.6951631659765 4.24451602702299 3.87053658797085 3.9032285237922 4.17802621761362 3.78007813739372 3.90018801938471 4.32022435815305 4.520846437324 0.222495655374301 0.219419893769297 0.208204463694505 0.209138580371345 0.206623626194278 0.214483077850379 0.211275114400374 0.217109279270536 0.234770154896309 0.209352461039135 0.209956555010131 0.210469719407042 0.206866233064969 0.209641286380239 0.214741562374029 0.213424458759069 0.210572314450343 0.210550552647896 0.210760444539649 5 0|5 /|- 9942072 9942648 9942312.6 9941909 9944782 - gene protein_coding_gene TRUE TRUE AT5G27920.1 F-box family protein similar to F-box family protein (FBL3) [Arabidopsis thaliana] (TAIR:AT5G01720.1); similar to Leucine-rich repeat; Leucine-rich repeat, cysteine-containing subtype [Medicago truncatula] (GB:ABE85688.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -1.46730568486358 -15.0139266836643 1.79568524422717e-08 8.5115480576368e-05 12.7232286018323 8.93550870258542 -1.46730568486358 0.0928064342752872 AT5G08610_at 4.99994090926401 5.15486446809446 4.84593079018825 5.11455420866635 4.48001318937538 4.65907802359099 4.99587458527656 4.77635203500589 4.57959676731587 4.77239344447034 3.45333628382292 4.24367972401607 3.7659652347112 3.76538270369615 5.21147564346173 4.92075779667175 4.85244585318829 3.92958426988902 5.667366876323 0.251703547035268 0.252210019346764 0.248139327524940 0.250758264798586 0.256983880352667 0.246537754182573 0.253638533220855 0.251550303787341 0.251116509365411 0.249972806587584 0.255561150758653 0.253342563055305 0.246537754182573 0.249862872487566 0.259535680678733 0.246537754182573 0.250791750259808 0.260216126793756 0.247302776245258 5 5 + 2793171 2793991 2793613.182 2790296 2794216 + gene protein_coding_gene TRUE TRUE AT5G08610.1 DEAD box RNA helicase (RH26) Identical to DEAD-box ATP-dependent RNA helicase 26 (EC 3.6.1.-) (RH26) [Arabidopsis Thaliana] (GB:Q9FNM7;GB:Q9ZRZ9); similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G63630.1); similar to DEAD box RNA helicase (RH25) [Arabidopsis thaliana] (TAIR:AT5G08620.1); similar to myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61516.1); similar to DEAD-box ATP-dependent RNA helicase 31 (GB:Q9FFQ1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD46119.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -1.36415421944901 -14.9805036776538 1.83673878827499e-08 8.70430511763519e-05 12.7140401962880 9.51546642687534 -1.36415421944901 0.0726858872725922 AT5G17450_at 5.834757463342 5.39910185346895 8.90138196703642 8.85787082432143 8.72833741233258 8.14031251665047 6.03347750459152 5.48727871252031 4.47935985192506 5.38994027586083 8.5268714378027 7.75779954513825 7.52061226589141 7.74386702719871 7.05723994506703 7.88270539155247 8.30693628781725 8.47525827553797 5.29882454176393 0.233191275022244 0.226090104246531 0.209892020389060 0.214126154268245 0.217585724245486 0.208688432026193 0.219060623296749 0.218753214016869 0.239362149248934 0.224756873441801 0.211413390739106 0.211837310530235 0.210054723711318 0.216615255566201 0.211499472960328 0.208688432026193 0.214156155896384 0.208688432026193 0.215428778729608 5 5|0 +|/ 5755400 5756702 5756473.778 5755324 5756890 + gene protein_coding_gene TRUE TRUE AT5G17450.1|AT5G17450.2 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84676.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related [Arabidopsis thaliana] (TAIR:AT1G71050.1); similar to farnesylated protein 3 [Hordeum vulgare subsp. vulgare] (GB:CAD70173.1); similar to Os01g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043154.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.87056084720229 14.9014390660051 1.93798711056225e-08 9.18218292984394e-05 12.6921315373233 13.6552911960416 1.87056084720229 0.158209771628662 AT5G36910_at 3.44175602536199 3.87322811167426 6.12455576132149 6.49031844182265 5.29044825193707 5.80958553471287 6.78677738025668 6.80158851194498 4.76927871610611 6.40021540010964 10.9651250580186 10.8845535736828 11.1766010076890 11.1125545432611 10.2502998737494 10.9237901349442 10.4374910654165 11.054603912252 7.15998931049779 0.295294688552079 0.291284114377128 0.273958642599469 0.271116289549594 0.268253066452824 0.284321953855134 0.273461360243891 0.269942210909348 0.269331546459104 0.274116267118777 0.270900536477243 0.271682956070595 0.26889497116582 0.272674130678009 0.268253066452824 0.270640729950675 0.271064141738393 0.271115476290573 0.268732121242192 5 5|0 -|/ 14579288 14579841 14579581.8 14579047 14579980 - gene protein_coding_gene TRUE TRUE AT5G36910.1 THI2.2 (THIONIN 2.2); toxin receptor binding Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Identical to Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic protein] (THI2.2) [Arabidopsis Thaliana] (GB:Q42597;GB:Q8LEF0;GB:Q9FIW2); similar to thionin, putative [Arabidopsis thaliana] (TAIR:AT1G66100.1); similar to thionin (GB:AAC41679.1); contains InterPro domain Thionin; (InterPro:IPR001010) 1.69087191504703 14.8464874937586 2.01193593680166e-08 9.53054053262944e-05 12.6767600936759 14.0575098548946 1.69087191504703 0.132889011868944 AT5G48490_at 9.74290971608475 10.0807260762736 3.88375378792043 4.17242455417002 9.45154697526843 9.35855037886377 8.48940246177052 8.95715146790293 10.8966861364678 9.55351809307022 12.2935420441561 13.0187857566501 11.1114687365832 11.7155214038842 12.1866005716923 10.9301464394798 7.3417695667278 10.4889334573429 10.0655577990335 0.144010862634514 0.14272713350109 0.215540004273316 0.180651513364776 0.141602901467269 0.140409689602734 0.143332065215891 0.152158267426024 0.147546203774125 0.149088713931797 0.146370546948932 0.143256800823238 0.140409689602734 0.145313959846192 0.143430299147594 0.140409689602734 0.179907828691372 0.140409689602734 0.144754856145070 5 5 - 19665170 19665373 19665273.273 19665061 19665507 - gene protein_coding_gene TRUE TRUE AT5G48490.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1), lipid binding [Arabidopsis thaliana] (TAIR:AT5G48485.1); similar to Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor [Medicago truncatula] (GB:ABE79318.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -1.55248550425568 -14.731962132159 2.1761386102855e-08 0.000103061924583121 12.6443380379077 18.6709415139093 -1.55248550425568 0.112802998769560 AT5G27420_at 7.35914515630858 7.54874031840167 9.4899923440599 9.5614803939793 8.19704432076656 8.40771216140252 2.36758184393533 2.49190943110547 3.84051350500446 2.75330217673605 2.77019695754335 4.44625641404465 3.02689176096423 3.51327349762894 3.44097354062889 3.02044573626021 3.72380784138509 3.93540452771984 2.52345669922490 0.306628231945181 0.313066902261858 0.301226645559065 0.301435023797153 0.306387098489277 0.305509347743301 0.298325444392341 0.297476528294918 0.297507854438442 0.290731960283122 0.285367968534180 0.293793799476645 0.291647258565252 0.302770021894051 0.288874555262871 0.285179844829985 0.286916254316823 0.292814960178719 0.29437704461776 5 5 + 9684633 9685196 9684848.455 9684075 9685564 + gene protein_coding_gene TRUE TRUE AT5G27420.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5H precursor (ATL5H) [Arabidopsis Thaliana] (GB:Q8LGA5); similar to ATL6 (Arabidopsis T?xicos en Levadura 6), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G05200.1); similar to RING/C3HC4/PHD zinc finger-like protein [Cucumis melo] (GB:AAO45753.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 1.26913086033332 14.7163136683702 2.19968721886237e-08 0.000104155189813133 12.6398670025722 10.1898242853334 1.26913086033332 0.0549690793758303 AT5G65390_at 1.96892214809562 2.4686615914912 1.08972581238838 1.03976883761910 3.22601900268681 3.42971532893272 0.729210437902435 0.752201557170305 2.12779627066404 1.59909167944164 7.89324879640153 4.42494831929353 4.1480647121097 4.36587612938782 7.42800731275115 2.08606222862986 1.48619148062227 4.31914439117183 1.68292669521145 0.351850046316732 0.358291369904385 0.355332970316534 0.362156020803184 0.364651474753865 0.36139779049572 0.358024627270393 0.364422360716246 0.353916690384714 0.359081373730551 0.390940667827579 0.363366650398758 0.361900232969057 0.383613360687657 0.392098320040201 0.353606323078136 0.361193903658501 0.355059487933037 0.351850046316732 5 5 - 26146109 26146472 26146175.273 26145810 26146564 - gene protein_coding_gene TRUE TRUE AT5G65390.1 AGP7 (Arabinogalactan protein 7) Identical to Classical arabinogalactan protein 7 precursor (AGP7) [Arabidopsis Thaliana] (GB:Q8LG54;GB:Q9FKQ0); similar to AGP4 (ARABINOGALACTAN-PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT5G10430.1); similar to 4D11_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67543.1); contains InterPro domain Glutelin; (InterPro:IPR000480) 1.43740669590436 14.6503143342209 2.30210872763584e-08 0.000108981827166281 12.6209002605769 4.99913532440333 1.43740669590436 0.0938741393145184 AT5G51720_at 8.7596131320189 8.47160067678543 8.62503796763517 8.44617372188194 6.46084389473713 6.9110176258745 10.1937910203943 10.1534995906229 8.15873589593262 8.94743953311399 9.31273136732892 8.80740888880496 8.89988928491524 8.89174757531267 8.9978567071713 8.50918235501442 8.87793395902873 10.2324057610664 8.45668027601447 0.132314251595830 0.126253178630881 0.135100051606868 0.128713649283079 0.154814561335894 0.141674370818784 0.135613058784709 0.13466419383185 0.141332551539796 0.134366228783191 0.133785261851728 0.128111500652130 0.125900952683713 0.127244344416224 0.128483536858867 0.128414897737029 0.135578973775292 0.127790808868190 0.131167958233497 5 5|0 +|/ 21026871 21027412 21027056 21026818 21027571 + gene protein_coding_gene TRUE TRUE AT5G51720.1 similar to zinc finger, CDGSH-type domain 2 [Homo sapiens] (GB:NP_001008389.1); similar to Os07g0467200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059590.1); similar to hypothetical protein [Homo sapiens] (GB:CAD97935.1); contains InterPro domain Zinc finger, CDGSH-type; (InterPro:IPR006622) -1.44134599247717 -14.4794165708897 2.59229991011381e-08 0.000122693554745687 12.570952557519 17.2962453982525 -1.44134599247717 0.0977756370023 AT5G60910_at 5.72907071132522 6.14432274899845 6.90136741377368 6.63497887657002 5.99250712886754 5.83340901241845 6.68326768738045 6.81582144708811 6.04621118137526 3.40136760553297 2.93568696328534 2.81996508878401 2.77259276910807 3.61587399674500 2.81834683135792 6.18708144652701 3.73212140358407 3.16057650784263 3.84987135251771 0.327660001083086 0.331180444945288 0.331203985464849 0.327889752702991 0.326759658014253 0.329373931508004 0.326759658014253 0.328985221283980 0.333646351878508 0.326759658014253 0.327973950757255 0.333427040012751 0.334166008013282 0.326759658014253 0.335905153377764 0.327953124964722 0.331030912369449 0.338272362644492 0.334421375556487 5 5|0 -|/ 24519963 24523058 24520870 24519708 24523369 - gene protein_coding_gene TRUE TRUE AT5G60910.1|AT5G60910.2 AGL8 (AGAMOUS-LIKE 8); transcription factor|AGL8 (AGAMOUS-LIKE 8) MADS box gene negatively regulated by APETALA1 Identical to Agamous-like MADS-box protein AGL8 (Floral homeotic protein AGL8) (Transcription factor FRUITFULL) (AGL8) [Arabidopsis Thaliana] (GB:Q38876); similar to AP1 (APETALA1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69120.1); similar to MADS-box protein FUL-d [Brassica oleracea var. botrytis] (GB:CAD47852.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487)|Identical to Agamous-like MADS-box protein AGL8 (Floral homeotic protein AGL8) (Transcription factor FRUITFULL) (AGL8) [Arabidopsis Thaliana] (GB:Q38876); similar to AP1 (APETALA1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69120.1); similar to MADS-box protein FUL-d [Brassica oleracea var. botrytis] (GB:CAD47852.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -1.41196753647026 -14.459011329746 2.62953231484077e-08 0.000124429469138265 12.5649070272707 10.3107251311592 -1.41196753647026 0.0925931105175184 AT5G15350_at 7.12571565740982 7.45848535536349 5.83600327209701 5.73483281953861 7.64075278735532 7.72848868132364 9.26693799411886 9.06237759557473 10.0733195520635 9.1698835810137 10.9449597478275 10.4625434314095 10.0947419246441 10.3275736745262 10.5247406715828 9.40365622094505 8.78635432523182 10.1256290748918 9.42861005473404 0.150127589649918 0.142773499528878 0.180655032825247 0.181401451394415 0.144750171387885 0.148694607273865 0.132902171410471 0.132710095188729 0.133776852756239 0.132710095188729 0.132984326512091 0.133380412584265 0.135497351205011 0.135471738194291 0.136692540862513 0.134186942982404 0.137920010984882 0.134738177664380 0.137415539537809 5 5|0 -|/ 4985226 4986125 4985682 4984962 4986242 - gene protein_coding_gene TRUE TRUE AT5G15350.1 plastocyanin-like domain-containing protein Identical to Lamin-like protein precursor [Arabidopsis Thaliana] (GB:Q39131;GB:Q8H7E7); similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G12880.1); similar to lamin [Brassica oleracea] (GB:CAA65749.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) -1.30503800861832 -14.3893953027537 2.76101036031032e-08 0.000130623400146281 12.5441483998417 17.3022222435907 -1.30503800861832 0.0714599843413793 AT5G13080_at 2.96379332607719 2.78189635609563 7.21356242439701 7.5019183118587 2.97375202047366 2.84858942160416 0.798617852446432 1.08060609559131 1.05379267056382 1.45203143365327 1.30616245496449 1.09141702749787 0.939901576946944 0.875470563759713 1.28364120924679 1.11644610526134 1.11045063453311 1.11543996838136 1.08317221967431 0.310024012371822 0.300049588360244 0.336283999384482 0.325159998361334 0.297242699641749 0.311042664749767 0.285193080204266 0.285193080204266 0.291476450400318 0.293983150571115 0.299779391654703 0.285193080204266 0.291099222448416 0.285193080204266 0.288300985865793 0.293068403416682 0.294041191565816 0.290568302091523 0.292223668372978 5 5|0 -|/ 4149932 4150983 4150438 4149747 4151153 - gene protein_coding_gene TRUE TRUE AT5G13080.1 WRKY75 (WRKY DNA-binding protein 75); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 75 (WRKY DNA-binding protein 75) (WRKY75) [Arabidopsis Thaliana] (GB:Q9FYA2); similar to WRKY45 (WRKY DNA-binding protein 45), transcription factor [Arabidopsis thaliana] (TAIR:AT3G01970.1); similar to WRKY-type DNA binding protein [Solanum tuberosum] (GB:BAC23031.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.33038862226793 14.2726275601449 2.99791946704477e-08 0.000141801590791218 12.5088613964589 4.67094112633689 1.33038862226793 0.0795710295232372 AT5G47330_at 4.91861219781069 5.54351261576992 8.62945352669034 8.71809648503494 10.3755595868005 10.0067801555004 8.32688102372046 8.25400671214984 8.12450280069442 7.63390877207531 10.4863232007702 8.82320778655228 8.93975431359627 10.1996298387678 9.36488980083679 8.78817452742099 8.91602131369561 9.89965447307969 5.6871678913317 0.195392528375190 0.191734635875177 0.169928714820161 0.160719231919117 0.154926442086707 0.163765694856744 0.164010923706458 0.155173368210786 0.174782698748063 0.171676636156064 0.156971138021725 0.159207626463435 0.155011574155938 0.161500041569582 0.159999258701954 0.157316616610738 0.161154339508909 0.155702039128079 0.185357994998056 5 0|5 /|+ 19225206 19225911 19225647.125 19224326 19226049 + gene protein_coding_gene TRUE TRUE AT5G47330.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47340.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) 1.58898847020579 14.2667383586244 3.0104412590243e-08 0.000142363767139259 12.5070659723084 16.3844794853715 1.58898847020579 0.127129475581508 AT5G16380_at 4.39470560427343 4.71119620632967 5.23211423218369 5.15353155062548 5.51540324721397 5.66126422714704 2.04363847587404 2.21717115644565 1.97790957107084 1.84075147238919 3.30820467132554 3.13192359294293 3.41107223341122 3.51095157943009 3.78618695226498 3.2108895900954 4.38956688920337 3.98400465093569 1.76317283409415 0.294900890534557 0.279291109917913 0.274240352886142 0.284358529531992 0.282670816119292 0.27984755030451 0.298040689299861 0.285439448112588 0.286876071523952 0.281191535640463 0.278514399978539 0.277069539703919 0.277117638037753 0.275019534312705 0.274240352886142 0.274240352886142 0.280602759929427 0.274240352886142 0.287732557098551 5 5 - 5360128 5360480 5360293.364 5359366 5360713 - gene protein_coding_gene TRUE TRUE AT5G16380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07470.1); similar to hypothetical protein [Nicotiana tabacum] (GB:CAI84656.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.27802238339169 14.217148203906 3.11817115167900e-08 0.000147427132051383 12.491887097089 7.09223374374623 1.27802238339169 0.068729189858571 AT5G03760_at 3.67123792001151 4.421074831974 2.85360283819649 2.79457142348735 3.03868545538797 2.88691112415158 8.18555722853938 8.55899421304475 6.38160771793298 7.5655248050301 9.7835006941069 10.3946073454907 9.22086795431948 9.08076595528395 9.66701813873987 9.14432034526819 7.6950320438235 9.2506880030626 7.92863258993774 0.294784257523066 0.301833316074464 0.30848553801728 0.298669656367809 0.300466208316613 0.300272000501344 0.294085930474119 0.292063203600909 0.32684178511242 0.295567182786223 0.288391232402187 0.284657860218143 0.283706423880462 0.30953196073761 0.285008164974166 0.286136402978946 0.302272058874482 0.29593455831818 0.290503708628734 5 5 - 985937 986559 986288.818 985674 990548 - gene protein_coding_gene TRUE TRUE AT5G03760.1 ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4); transferase, transferring glycosyl groups encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. similar to ATCSLA02 (Cellulose synthase-like A2), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G22740.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to ATCSLA07 (CELLULOSE SYNTHASE LIKE), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G35650.1); similar to glycosyltransferase 1 [Ipomoea trifida] (GB:AAQ62570.1); similar to Glycosyl transferase, family 2 [Medicago truncatula] (GB:ABE81491.1); similar to cellulose synthase-like protein OsCslA9 [Oryza sativa] (GB:AAL25128.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) -1.71015221565976 -14.1826392682309 3.19561551601435e-08 0.000151056745441999 12.4812602619449 12.8370902615052 -1.71015221565976 0.147678682485152 AT5G51560_at 3.81063499218789 3.98004767415376 2.9956447936827 3.32765568421025 3.01679047902298 3.14029479354326 4.30126943268875 4.36348626284988 4.69410869065259 4.84582597722306 5.84359939682547 6.83345193654137 4.52756268877311 4.60477000850577 5.99073221828671 4.16531389097857 4.04979803019377 5.00029574314725 5.57269932123944 0.232815163320707 0.235744850025913 0.245118026469496 0.230903209118504 0.236871865288371 0.230782998280162 0.230782998280162 0.232480818095406 0.240347520470747 0.231324062030696 0.235663778350723 0.230782998280162 0.230782998280162 0.237028179716067 0.233972819736899 0.231383441856307 0.238383866600767 0.235231276894572 0.230782998280162 5 5 + 20965219 20965784 20965517.818 20962913 20966080 + gene protein_coding_gene TRUE TRUE AT5G51560.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G45340.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G22730.1); similar to Os06g0134700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056717.1); similar to putative somatic embryogenesis protein kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD68873.1); similar to Os01g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043393.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -1.26996399967126 -14.1242829710465 3.33139101900045e-08 0.000157441539557961 12.4631690426752 8.69922059013987 -1.26996399967126 0.0688000875471103 AT5G39520_at 5.86955274165984 5.35599741186476 8.74047283948585 8.42794403421249 7.81581020269029 7.70321912311163 2.32752620430409 2.14653986535593 2.13675476846589 1.88258250046290 2.39721493704189 1.88612864864356 2.07541652622366 2.03181086858127 2.03597653392587 1.85156348203273 2.48195882703976 2.44989733875385 1.80926649491328 0.323262200512457 0.313585250879591 0.345975064286489 0.341401114869715 0.328713411612138 0.345015651048777 0.299630707812935 0.299630707812935 0.300806309179777 0.308343427438389 0.3058208431143 0.300023829161915 0.299630707812935 0.306345655668447 0.299630707812935 0.309009969729363 0.304518169779617 0.313799244606946 0.314487586988561 5 5|0 -|/ 15841364 15842521 15841652.889 15840963 15842720 - gene protein_coding_gene TRUE TRUE AT5G39520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39530.1); similar to hypothetical protein MtrDRAFT_AC119412g1v1 [Medicago truncatula] (GB:ABE86761.1) 1.47439392133177 14.1214014781123 3.33825626106447e-08 0.000157732608335296 12.4622717892599 8.09543971111612 1.47439392133177 0.110382037516186 AT5G11970_at 6.58373443228228 6.44924918611908 7.924425267513 7.98916281081492 7.86719204193484 7.7228432840694 4.82573489475536 5.41910457817002 5.50356221892819 4.41046824897427 8.48375781031667 8.02640648562535 7.85008182307277 8.2611263989031 8.04156375713077 8.1880639831451 7.8796453204652 6.93331063190799 5.08437856601799 0.2081861763746 0.202616379676127 0.207461753400402 0.205852760702387 0.201726821911318 0.211890694379409 0.206759068602727 0.211129886838452 0.209614489761123 0.226861362144190 0.206854638404312 0.200858847426008 0.197688507330340 0.199068166128867 0.211849234280076 0.198004211812461 0.201128413394914 0.212019284815830 0.202186437436175 5 5 - 3863297 3863583 3863453.091 3863072 3863756 - gene protein_coding_gene TRUE TRUE AT5G11970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19460.1); similar to hypothetical protein MtrDRAFT_AC152551g19v1 [Medicago truncatula] (GB:ABE86249.1) 1.46291660991669 14.0969771839512 3.39707104750374e-08 0.000160477636284077 12.4546514185601 13.3264129141045 1.46291660991669 0.108790890593999 AT5G15190_at 1.78457234594105 2.12001676885318 4.39598812176959 4.37967792321348 6.03858738466174 4.9232088855483 2.30194830121700 2.14783980920331 0.908246679090983 1.15533354182322 2.46044324879725 2.85712797962616 4.16126946479902 2.75139255981382 2.27201733185581 2.44022380950001 4.6573763931556 2.86290237959061 1.05367145756673 0.268148434356515 0.2570292693523 0.263414433621645 0.265702996771154 0.269846687057853 0.266756382996182 0.2570292693523 0.2570292693523 0.267986326390702 0.268582145114956 0.260384834877091 0.2570292693523 0.259663626747047 0.266820911805472 0.260156880615705 0.262134886639402 0.282141131990062 0.264068377055598 0.264341440128086 5 5 - 4933155 4933456 4933281.182 4932823 4933580 - gene protein_coding_gene TRUE TRUE AT5G15190.1|AT5G15190.2 unknown protein 2.07204311344119 13.9933888810656 3.65937561585437e-08 0.000172832310336802 12.4220310917366 5.55994396191059 2.07204311344119 0.203337949150798 AT5G14760_at 3.16287647314314 3.5222002301072 3.51869550521849 3.59144925921166 1.93089692557531 2.1629196541651 5.07902693801519 6.03930382365086 4.19390626587609 4.24376120310102 3.3396721113762 3.33030680166261 2.77702095336987 2.96640360095764 2.91130307328803 4.44085799715907 3.15478552043182 2.6779575074554 3.87552077585076 0.240947253623826 0.234605698808568 0.238617939485967 0.233462222376225 0.237019781247283 0.236124318620098 0.247717782405817 0.259541097970048 0.231957308677425 0.233045385880514 0.232501356274976 0.233783860520186 0.234059876230554 0.235775319732670 0.238887163473169 0.236369581405889 0.245510744307442 0.235609688505282 0.231491327796957 5 5 + 4771446 4771960 4771671.273 4768471 4772156 + gene protein_coding_gene TRUE TRUE AT5G14760.1 AO (L-ASPARTATE OXIDASE); L-aspartate oxidase At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 similar to SDH1-1 (Succinate dehydrogenase 1-1) [Arabidopsis thaliana] (TAIR:AT5G66760.1); similar to Os02g0134400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045812.1); similar to L-aspartate oxidase [Pelodictyon phaeoclathratiforme BU-1] (GB:ZP_00589739.1); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; (InterPro:IPR004112); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027); contains InterPro domain L-aspartate oxidase; (InterPro:IPR005288) -1.91987853158890 -13.9775878424747 3.70129183545769e-08 0.000174775000470312 12.4170121338668 7.2780133647968 -1.91987853158890 0.182355026030479 AT5G36950_at 4.02349321314657 4.31627752798877 3.84513179843289 4.10880343582492 4.42369780704258 4.16306665750342 6.58922932873901 5.92688130561839 4.21832146583355 5.21340279193657 4.17881445187838 4.09833585850055 3.71359419771996 4.04076584135646 5.10339802200575 4.92264382127353 4.98946266759326 4.4005081817861 5.18103533394035 0.266169876949817 0.26547299171954 0.269906752338554 0.268843142475929 0.272272111465763 0.271457751549880 0.276578719513275 0.286605785624625 0.274795200261539 0.277337798933946 0.277379064912165 0.268294222137427 0.288189822947358 0.268817740122186 0.269076323088990 0.26547299171954 0.272553029447221 0.269667391459577 0.271207122323767 5 0|5 /|+ 14614489 14615414 14614889 14612211 14615579 + gene protein_coding_gene TRUE TRUE AT5G36950.1 DEGP10 (DEGP PROTEASE 10); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 10, mitochondrial precursor (EC 3.4.21.-) (DEGP10) [Arabidopsis Thaliana] (GB:Q9FIV6); similar to DEGP3 (DEGP PROTEASE 3), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT1G65630.1); similar to Os05g0417100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055560.1); similar to Serine protease (ISS) [Ostreococcus tauri] (GB:CAL53952.1); similar to Os02g0742500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048089.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) -1.63486078646920 -13.9226647158350 3.85110962984343e-08 0.000181810885624909 12.3994768790430 9.32550275637094 -1.63486078646920 0.140790247382501 AT5G65850_at 3.25846135855012 3.6658146381943 5.33164508077471 5.37112611227227 5.84634102755381 6.3429142029149 2.48139102481518 2.54693847215087 2.2924771520748 2.42873879045022 3.88662384459117 4.05177055779584 4.34059461649841 3.97070328649189 3.65070748474314 4.39251562318074 4.49643604877548 3.86419580163177 2.78184814113836 0.254776667908247 0.247425018280416 0.255860027330105 0.264915766700955 0.263579550869294 0.273142554204454 0.256002710567311 0.255692617230862 0.26719235825336 0.259063317694275 0.252086878945506 0.25124864628811 0.252041078334075 0.247425018280416 0.247425018280416 0.248309832171045 0.247425018280416 0.250716128344453 0.267039527044281 5 5 + 26364154 26364649 26364408.818 26363540 26364836 + gene protein_coding_gene TRUE TRUE AT5G65850.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G31470.1); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 1.45959574704644 13.8967063836032 3.92420720579786e-08 0.000185222580113659 12.3911403935141 7.6469363742456 1.45959574704644 0.111935313993078 AT5G22300_at 9.34957048533333 9.36297418046011 10.5668201306574 10.5744068505230 10.3963967966022 10.2554986298876 8.92806366610811 9.00066127526023 5.71230925704669 6.80549043968026 7.95969817152237 8.08791903551063 9.89897037735933 9.35374401276612 7.860695922595 10.7121338912690 10.3583916056343 9.199592459684 7.3586369424425 0.206997645942175 0.204522413565861 0.210557871901223 0.209629807353784 0.207192390831778 0.20884716362883 0.200174731999229 0.200174731999229 0.232541754720638 0.221526333844589 0.217287827586417 0.213220996697475 0.20148712869178 0.207536094667069 0.242878889145961 0.201277151489099 0.206513836705849 0.212235973595940 0.233563813767588 5 5 + 7380988 7381718 7381362.909 7379202 7381928 + gene protein_coding_gene TRUE TRUE AT5G22300.1 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. Identical to Nitrilase 4 (EC 3.5.5.1) (NIT4) [Arabidopsis Thaliana] (GB:P46011); similar to NIT3 (NITRILASE 3) [Arabidopsis thaliana] (TAIR:AT3G44320.1); similar to NIT2 (NITRILASE 2) [Arabidopsis thaliana] (TAIR:AT3G44300.1); similar to Nitrilase 4 (GB:Q42965); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010); contains InterPro domain Nitrilase/cyanide hydratase; (InterPro:IPR000132) 1.12661056735944 13.8864455673611 3.95351704067627e-08 0.000186566469149513 12.3878364624872 17.7064850339869 1.12661056735944 0.0275586080677274 AT5G25350_at 8.47379523663722 9.00429436638582 8.98949009363501 9.11053526887884 9.92452730073845 9.6689195409445 6.3170856904393 7.04946850609967 7.23767910523725 6.20208432886746 10.4391228388763 10.0713698826629 10.4254573251517 10.2825187731630 10.2572204392350 10.5649856823250 10.7993583304625 10.2254009498301 7.19319236401954 0.164401055107534 0.15919379954508 0.159769466568991 0.160495409299891 0.164282093552328 0.161468292476898 0.187097142148059 0.174128241806184 0.180921511708580 0.195848673593831 0.159588895621901 0.164481543442148 0.15919379954508 0.16799241415085 0.15919379954508 0.171532471382433 0.160271974033951 0.15919379954508 0.195318589596713 5 5 - 8794879 8795397 8795175.727 8794255 8797023 - gene protein_coding_gene TRUE TRUE AT5G25350.1 EBF2 (EIN3-BINDING F BOX PROTEIN 2) Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. similar to EBF1 (EIN3-BINDING F BOX PROTEIN 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G25490.1); similar to EIN3-binding F-box protein 2 [Lycopersicon esculentum] (GB:ABC24972.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE90278.1); similar to EIN3-binding F-box protein 1 [Solanum lycopersicum] (GB:ABB89717.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 1.78023994951189 13.8761900361360 3.98305032516003e-08 0.000187920314341050 12.3845293039614 17.1976801056806 1.78023994951189 0.16397339668894 AT5G19120_at 9.52682734942429 9.75194031274616 7.93325312131507 8.22222019959142 10.2425971261546 10.1724853645517 8.07444009215858 8.3870300125371 8.6172216578227 8.53384410453304 7.31974043533771 8.44189892612415 7.55320709763399 7.8609279461488 6.95244744641038 7.01835698931721 7.14853280789276 7.67464491052806 8.81388707321469 0.187761425255378 0.186126244050749 0.19801538131366 0.189885778068776 0.18765543101848 0.183690724758310 0.188840444572317 0.195271804905927 0.199716823678483 0.188011466940697 0.189138797284067 0.185023988132217 0.200609776917350 0.191928939616916 0.191234318701365 0.184276071708665 0.194498850558879 0.193866095246591 0.183690724758310 5 5 + 6415165 6415719 6415424.455 6414490 6415909 + gene protein_coding_gene TRUE TRUE AT5G19120.1 pepsin A similar to extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] (TAIR:AT1G03220.1); similar to EDGP precursor [Daucus carota] (GB:BAA03413.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -1.30973720887604 -13.8242789339849 4.13627627581401e-08 0.000195108151930147 12.3677133164155 17.1144511215337 -1.30973720887604 0.0842130894701759 AT5G05410_at 6.16350518117746 6.71865186864111 7.31891323619107 7.41952269486307 8.51784329550496 8.27121299651266 2.93283488908925 2.98117425062494 2.81346135941823 2.26275908292403 3.32054752852747 3.31737672221561 4.02581713112705 3.75498161249853 3.55966283151767 3.56136154098953 5.0279002715413 4.11729639619684 2.19447425837676 0.250988390320934 0.246012161021285 0.258227668202564 0.244060881600492 0.246930526453483 0.245363409953745 0.243343318969857 0.246642744490924 0.249544022636938 0.247519000308383 0.235383654204249 0.241048992711932 0.238143419213615 0.235383654204249 0.235383654204249 0.235383654204249 0.24564807784018 0.240591899538105 0.241528186109047 5 5 + 1603112 1603611 1603432.909 1602206 1603927 + gene protein_coding_gene TRUE TRUE AT5G05410.1|AT5G05410.2 DREB2A (DRE-BINDING PROTEIN 2A); DNA binding / transcription factor/ transcriptional activator Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. Identical to Dehydration-responsive element-binding protein 2A (DREB2A protein) (DREB2A) [Arabidopsis Thaliana] (GB:O82132); similar to DREB2B (DRE-binding protein 2B), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT3G11020.1); similar to DREB2A-like protein [Arachis hypogaea] (GB:ABC60025.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 1.4139548027167 13.7245675075199 4.44892886071906e-08 0.000209811485071511 12.3350539025500 9.42004875385878 1.4139548027167 0.106884661105183 AT5G52760_at 8.39989098101328 8.8836549440373 10.7497470534673 10.8387170542827 9.23752540749335 8.50322439655938 2.0734343242092 2.10701751265151 4.85245999997114 3.03267970949015 4.05164796705657 4.75217818933812 3.82859058530707 4.80140403715593 4.40328288415851 5.74493408157421 4.15612508769087 5.14526699551786 3.13326387815053 0.253227839175258 0.258030704714178 0.254291019467251 0.253670521940683 0.267119650564535 0.273860332123689 0.262163361943922 0.268644965162288 0.267675961107041 0.260981651465001 0.253227839175258 0.253227839175258 0.257209504133773 0.262528607337173 0.261832911583025 0.260811323584497 0.265959885277659 0.269335136633536 0.254055748054049 5 0|5 /|+ 21404344 21404701 21404588.778 21404050 21404925 + gene protein_coding_gene TRUE TRUE AT5G52760.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.68316622159534 13.6741155018006 4.6168611819326e-08 0.000217685004728122 12.3183468080692 11.740766421387 1.68316622159534 0.153059883594758 AT5G05860_at 6.39193583641671 6.1568021308104 5.24081598491363 5.230969950124 6.57603010794446 6.79562920445755 7.08006009250544 7.31499704211264 7.47707112315674 7.81756318522323 8.2759445787805 8.90253824500726 7.4319722000348 7.9590740201445 8.96362946321374 7.80280027658376 6.82636844814953 8.19899204325663 7.69401080542347 0.183771774539754 0.187524848785511 0.194169239406481 0.187806676203890 0.188189781261101 0.188082344144226 0.186071675023673 0.19383911615119 0.188293714382517 0.195431681010416 0.190873602006159 0.188547918272275 0.186177044960171 0.185363415166011 0.185872664997737 0.182830243915368 0.188281061150881 0.182737461372032 0.191643111232194 5 5 + 1766836 1767294 1766981.273 1765508 1767456 + gene protein_coding_gene TRUE TRUE AT5G05860.1 UGT76C2 (UDP-glucosyl transferase 76C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups Identical to Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-) (UGT76C2) [Arabidopsis Thaliana] (GB:Q9FIA0); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glycosyltransferase 76G1 [Stevia rebaudiana] (GB:AAR06912.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -1.22247190206846 -13.5889719500045 4.91614419547627e-08 0.000231747037374751 12.2898703477011 14.2024283506593 -1.22247190206846 0.0689626499156896 AT5G65070_at 1.28205174987756 0.941368030262758 3.04079974998241 2.71723941586722 2.24846469140492 2.34959803520701 1.89980346906531 1.63523241552175 1.91061630379558 2.89615079335678 4.59509441398734 6.09984358323721 4.86933336352827 3.32080551078099 4.70947307132728 3.64613976939396 3.9500539060062 4.66910434265297 2.05879152820764 0.318322510645706 0.318322510645706 0.318322510645706 0.318322510645706 0.318524001770203 0.325008888819698 0.318322510645706 0.319543757177745 0.318322510645706 0.319252500809258 0.333355869245246 0.334660327832372 0.324888810988759 0.327070146790218 0.336538968968511 0.318322510645706 0.332577780703102 0.338107099290248 0.318322510645706 5 5|0 +|/ 26009640 26013108 26012148.833 26009486 26013321 + gene protein_coding_gene TRUE TRUE AT5G65070.1 MAF4 (MADS AFFECTING FLOWERING 4); transcription factor Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. similar to MAF5 (MADS AFFECTING FLOWERING 5), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65080.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 1.33708157755290 13.5741955972876 4.97020436849335e-08 0.000234245731887092 12.2848920663966 5.39981996309909 1.33708157755290 0.094941025356809 AT5G04340_at 5.78600343415066 6.04382885431586 7.93320040592491 7.95360251490368 7.8262870512387 7.96340267657105 3.68298304577242 4.24385284119072 3.14710041231247 3.08876074060948 4.11769963386092 4.11382911030438 4.684181091242 5.30357401248272 2.95928532657032 5.90925258226042 5.07390275967586 4.09772087603873 2.25694954725276 0.228286364301749 0.226165501963103 0.233803815456821 0.243119377322799 0.232506863976603 0.235588766811902 0.229175015824551 0.23006766809835 0.231797426224982 0.238557326002854 0.228919458564688 0.228468216484441 0.226090034421120 0.236766940516133 0.235955471450508 0.231350402817207 0.256995977609079 0.232203297283417 0.239326831304572 5 5 - 1216358 1216862 1216649.091 1216132 1217107 - gene protein_coding_gene TRUE TRUE AT5G04340.1 C2H2; nucleic acid binding / transcription factor/ zinc ion binding putative c2h2 zinc finger transcription factor mRNA, similar to STZ (SALT TOLERANCE ZINC FINGER), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G27730.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52060.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 1.4059468393448 13.5120818962832 5.20464112541507e-08 0.000245242689829558 12.2638468936781 10.1108288900648 1.4059468393448 0.109485740102634 AT5G64560_at 6.78575291982846 7.05435717430192 8.61174412992886 8.25789241062967 8.81478793254057 8.58822585236612 5.8968002589553 5.35247964175354 4.26256873245323 4.45754086627615 7.42598837992958 7.60406545882653 6.79921033601207 7.18292723869463 6.91258754373994 7.21467749370281 7.67883767123786 6.7029752723548 4.47357837534969 0.251715578446788 0.24488087210309 0.244760372529036 0.250539306253846 0.24661571829031 0.248783295188312 0.247909964200106 0.258382111100833 0.252264802409336 0.259907931926974 0.248739417771453 0.244299774946335 0.25050295790831 0.257610710943618 0.254957575007061 0.245353117149243 0.256122307308865 0.252983768453283 0.265430638048799 5 5|0 -|/ 25824479 25825343 25824969 25823995 25826867 - gene protein_coding_gene TRUE TRUE AT5G64560.1|AT5G64560.2 magnesium transporter CorA-like family protein (MRS2-2) similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 1.49854740072556 13.4222432123970 5.56530262117586e-08 0.000262181406483595 12.2330658924877 13.2142823728740 1.49854740072556 0.127753096886849 AT5G54190_at 5.66675930335509 6.42182032458246 3.5639597128566 3.70759202696079 3.89269653224076 3.88921869996067 4.10143714332102 4.10946720699072 6.91648774162338 4.64461889132372 5.61163447026769 6.08866940642312 4.47750973680712 5.43732930263683 7.0954734248138 5.27463983945663 3.30444979672346 4.77444174622987 4.03130783627019 0.290072946305841 0.301338175948063 0.29343141997164 0.293216087885253 0.272486003309938 0.287080087976894 0.272486003309938 0.279652824341317 0.30454928397675 0.272953346739682 0.27745409034751 0.288863466738708 0.272610188271259 0.275841727361819 0.286018593695894 0.272486003309938 0.288423062438466 0.272486003309938 0.277712372643402 5 5 - 22008493 22009158 22008817.818 22008138 22010038 - gene protein_coding_gene TRUE TRUE AT5G54190.1|AT5G54190.2 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase light-dependent NADPH:protochlorophyllide oxidoreductase A Identical to Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) (PORA) [Arabidopsis Thaliana] (GB:Q42536;GB:Q9FK22); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.2); similar to NADPH:protochlorophyllide oxidoreductase A (GB:AAC49043.1); similar to Protochlorophyllide reductase, chloroplast precursor (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (GB:Q01289); similar to protochlorophyllide reductase (EC 1.3.1.33) precursor - garden pea (GB:S20941); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Light-dependent protochlorophyllide reductase; (InterPro:IPR005979); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347)|Identical to Protochlorophyllide reductase A, chloroplast precursor (EC 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) (PORA) [Arabidopsis Thaliana] (GB:Q42536;GB:Q9FK22); similar to PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT4G27440.2); similar to NADPH:protochlorophyllide oxidoreductase A (GB:AAC49043.1); contains InterPro domain Light-dependent protochlorophyllide reductase; (InterPro:IPR005979) -1.52744304778079 -13.4047916676899 5.63847273525471e-08 0.000265572065830497 12.2270391561286 9.64686384636297 -1.52744304778079 0.133018595912975 AT5G56910_at 6.58146298855183 6.6234759784986 8.49002936274602 8.3933684763424 8.860581550109 8.92526074610803 5.30580589359521 6.03583565739585 4.91149608305329 5.13394904592959 7.29846859325825 7.53072384395398 8.12431946755672 7.79182424801472 7.74082802877869 8.11161210272157 8.22749287364969 7.28402917020439 5.63739475030215 0.198010685642617 0.188085865557805 0.191700977819022 0.190012544745311 0.188085865557805 0.194394878709032 0.194305101976519 0.210721272041970 0.216714827883346 0.201342517482982 0.197320564361625 0.198589522201736 0.19666268175484 0.196883903608064 0.194421800442299 0.188085865557805 0.197160932128414 0.199970001182721 0.201421721837063 5 5 + 23040551 23041210 23040852.182 23040148 23041431 + gene protein_coding_gene TRUE TRUE AT5G56910.1 cysteine protease inhibitor similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56920.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 1.49832373492181 13.4004113785992 5.657002333119e-08 0.000266388239866574 12.2255240254214 13.8976153737245 1.49832373492181 0.128134711382128 AT5G14210_at 5.21083398882766 5.2858449980783 4.53266398526018 4.36410554789074 5.14586216521930 4.99219821696897 5.14896372889717 5.14503533685568 5.87340365466549 5.20834118679342 6.01200131710743 6.47810470152178 5.53340052781898 5.89603462784974 6.21690504210977 5.9768172358981 5.34917751287886 5.39222403040752 6.01455951886851 0.187357560446058 0.185762248235925 0.184099313886424 0.191048024119997 0.185052467748661 0.174287048284034 0.185330711340008 0.190023080642037 0.182368508229327 0.186369419067891 0.17397325687018 0.182462119971132 0.181393077665040 0.184375401743672 0.179631896552184 0.172468389303950 0.180232456882405 0.172468389303950 0.187740503373960 5 5|0 -|/ 4578584 4579168 4578849.5 4578380 4581376 - gene protein_coding_gene TRUE TRUE AT5G14210.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G03770.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81107.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78913.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -1.11198994954208 -13.3405830223802 5.9168425667267e-08 0.000278564948041493 12.2047311962671 10.7559891182788 -1.11198994954208 0.0415571379715094 AT5G11150_at 7.3501202171625 7.58463612175349 8.3084521249321 8.06141632141901 9.84386783817906 8.58896620593911 4.85010550720891 4.88572148010978 2.05481642993887 2.69143159905886 6.31558705744278 5.88118444772291 6.66683280794505 6.64763438045793 5.96485176728749 5.21064779085677 6.41393823804328 5.83108519464482 2.34598855977339 0.259541360259409 0.257435285862052 0.26665176130275 0.263991278788867 0.273927533443285 0.266486541093003 0.262216292047439 0.258002093831296 0.265443043128152 0.257435285862052 0.257435285862052 0.257435285862052 0.257435285862052 0.264922024997896 0.260546422333125 0.264318558367398 0.279347232901101 0.267298518060846 0.261250873724882 5 5 - 3546642 3547755 3547245.818 3546287 3548112 - gene protein_coding_gene TRUE TRUE AT5G11150.1 ATVAMP713 (Arabidopsis thaliana vesicle-associated membrane protein 713) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 713 (AtVAMP713) (VAMP713) [Arabidopsis Thaliana] (GB:Q9LFP1); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Lon (GB:ABE77680.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 2.12687627559645 13.3316054284744 5.95694267206021e-08 0.000280393291573874 12.2015952271166 11.6744352638249 2.12687627559645 0.225108865568233 AT5G18470_at 7.53441389859938 8.52812395516305 10.1946066351717 10.1539527465377 8.97377319989547 8.83374156216936 1.35956117320991 0.68128922488573 4.18751442960408 1.53146926658725 2.52282346671525 4.95073413220012 2.52829769262592 3.56073429446538 2.56551776560573 3.13329718919301 2.38340273730737 2.98903319889725 1.06732235673665 0.257482340353049 0.251068445121788 0.246700921847535 0.255573569172927 0.246700921847535 0.246700921847535 0.247113813916389 0.250536688454564 0.271865349695544 0.246700921847535 0.246700921847535 0.255135137681517 0.254219576278132 0.252983294172127 0.247766712804645 0.246700921847535 0.253521319764916 0.249841861315191 0.253548594817361 5 5 + 6128766 6129136 6128926.364 6127799 6129287 + gene protein_coding_gene TRUE TRUE AT5G18470.1 curculin-like (mannose-binding) lectin family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67520.1); similar to Receptor protein kinase, putative [Solanum bulbocastanum] (GB:ABG29323.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 2.00884934606127 13.2679585622315 6.24986756866266e-08 0.000294118767781265 12.1792429086675 9.7030988380885 2.00884934606127 0.209730123413740 AT5G25210_at 6.67239413521113 6.64996769269919 6.57882028991449 7.12767846918029 8.63976374376027 8.26527928916878 2.43375924846595 2.47788081035337 3.0643443584175 2.8798442817626 4.57617083030076 4.11296417397163 4.24197322587465 4.56661202099567 4.33989942925153 3.59191103214351 4.46555121214628 4.33645893799222 2.3295765013254 0.303075955874047 0.303145537319627 0.319022202831601 0.309593776990286 0.30551684870746 0.312910662904011 0.307039875603143 0.297890124101137 0.296127399623461 0.29193416736811 0.29193416736811 0.29193416736811 0.300559879342585 0.293776652845687 0.29193416736811 0.29193416736811 0.314899719282765 0.29193416736811 0.301922594170971 5 5 + 8724104 8725407 8724605.182 8723961 8725774 + gene protein_coding_gene TRUE TRUE AT5G25210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32030.1) 1.40752260340613 13.2285633964011 6.43901685903054e-08 0.000302955743217387 12.1653017128495 9.62412512067903 1.40752260340613 0.115303449284434 AT5G20960_at 5.77497268590445 6.03497600845176 7.15396706754655 7.229278511774 7.50717254366206 7.08858887756936 2.38174000388624 2.63774332087171 2.87678045163857 2.91921481034107 4.42398596448085 4.38867363981729 3.80228461830634 4.71602497667756 4.54919620720895 3.87138320312147 4.65476929559401 4.37134379076812 3.23369989713544 0.249396435793609 0.245306089761075 0.247474592062812 0.247753322881034 0.247156654836615 0.250198704172761 0.246709730590124 0.247408048232401 0.262679060875274 0.245931601081088 0.240566433758968 0.240566433758968 0.249257541782311 0.245847424940821 0.244546903004257 0.244229232567205 0.252248258882802 0.246829412083071 0.240566433758968 5 5|0 +|/ 7121496 7122229 7121870.333 7116740 7122776 + gene protein_coding_gene TRUE TRUE AT5G20960.1|AT5G20960.2 AAO1 (ALDEHYDE OXIDASE 1) Encodes aldehyde oxidase AA01. Identical to Aldehyde oxidase 1 (EC 1.2.3.1) (AO-1) (AtAO-1) (AtAO1) (AAO1) [Arabidopsis Thaliana] (GB:Q7G193;GB:O49155;GB:O64417); similar to AAO3 (ABSCISIC ALDEHYDE OXIDASE 3) [Arabidopsis thaliana] (TAIR:AT2G27150.2); similar to AAO4 (ALDEHYDE OXIDASE 4), aldehyde oxidase [Arabidopsis thaliana] (TAIR:AT1G04580.1); similar to AAO2 (ALDEHYDE OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT3G43600.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93768.1); similar to aldehyde oxidase [Brassica rapa subsp. pekinensis] (GB:BAE93767.1); similar to aldehyde oxidase [Lycopersicon esculentum] (GB:AAG22607.1); contains InterPro domain CO dehydrogenase flavoprotein, C-terminal; (InterPro:IPR005107); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; (InterPro:IPR000674); contains InterPro domain [2Fe-2S]-binding; (InterPro:IPR002888); contains InterPro domain Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; (InterPro:IPR008274); contains InterPro domain Molybdopterin dehydrogenase, FAD-binding; (InterPro:IPR002346); contains InterPro domain Ferredoxin; (InterPro:IPR001041) 1.30516155247284 13.1504622265162 6.83270892371524e-08 0.000321410627771565 12.1374212314687 9.40460792664252 1.30516155247284 0.0969760298418929 AT5G62670_at 8.17024585740149 8.41213412278105 7.47015294679296 7.67331368668251 7.21391957027526 7.53383937363818 9.1771687265316 9.51839209557826 9.70467806397326 9.14402633244272 9.97210749655632 10.0548883762208 9.4379933480556 9.32248516842 10.057817556849 9.69078572650673 8.72893100575322 9.99884847145398 9.06722208465252 0.184402412915862 0.173303180662755 0.198153458046134 0.193589682140932 0.200026274491789 0.201756170473259 0.177137429751007 0.176710130918005 0.181888055991629 0.182057021876396 0.17761824697769 0.177182965531727 0.173311938110023 0.176963677494203 0.178125273341842 0.172710838220873 0.180640784910452 0.175146148361381 0.174335041455003 5 5|0 +|/ 25181248 25182092 25181674.2 25176456 25182435 + gene protein_coding_gene TRUE TRUE AT5G62670.1 AHA11 (ARABIDOPSIS H(+)-ATPASE 11); ATPase Identical to ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump 11) (AHA11) [Arabidopsis Thaliana] (GB:Q9LV11); similar to AHA3 (Arabidopsis H(+)-ATPase 3), ATPase [Arabidopsis thaliana] (TAIR:AT5G57350.1); similar to AHA4 (Arabidopsis H(+)-ATPase 4), ATPase [Arabidopsis thaliana] (TAIR:AT3G47950.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to plasma membrane H+-ATPase [Juglans re (GB:AAQ55291.1); similar to plasma membrane H+ ATPase [Prunus persica] (GB:CAB69824.1); similar to H+-translocating ATPase (GB:AAA34052.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain Plasma-membrane proton-efflux P-type ATPase; (InterPro:IPR006534); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) -1.29644298675340 -13.0286472654044 7.50008674135129e-08 0.000352729079445751 12.0932845401001 17.6277912828351 -1.29644298675340 0.0976749539324803 AT5G65300_at 2.96996808309014 2.94669709287179 3.66601581223787 3.89718881097992 4.41230449357885 4.55067625790114 1.95984992074675 1.64435635491281 1.59526444680360 2.40193095782555 3.24180042265604 4.14009754231744 3.08729148564887 3.02796000728038 4.07583117758768 3.98552222312774 3.17276597338392 3.84489022328701 2.23540960805090 0.28287267513126 0.28287267513126 0.290347043468109 0.291084709479487 0.293910373570348 0.294946829397107 0.289697187123308 0.299494356479402 0.292996901363491 0.292573206424620 0.28287267513126 0.296555958062785 0.285120983425267 0.287719994641232 0.284033902459593 0.28564972541244 0.28287267513126 0.28287267513126 0.2839366400915 5 5 - 26112498 26112910 26112753.273 26112373 26112997 - gene protein_coding_gene TRUE TRUE AT5G65300.1 similar to Avr9/Cf-9 rapidly elicited protein 75 [Nicotiana tabacum] (GB:AAG43558.1) 1.17615022806811 12.9491127311314 7.97396838327708e-08 0.000374935993381688 12.0640316970053 6.08065954635882 1.17615022806811 0.0719094562362878 AT5G52910_at 5.05413932662967 4.73202112319401 5.43719379142498 5.38517863296554 5.72593868938358 5.92641376966303 2.98038950767658 3.06898112523736 8.30371350355472 5.3570227630694 5.2153204200787 4.26709236463698 3.50430319037701 3.98758874063529 5.2563375712524 3.60110557164063 3.27680111100368 4.18862555174123 5.15812493921474 0.245530340688785 0.247613234246542 0.256848982174593 0.246894005322019 0.256003709066194 0.254432012418757 0.248795506252866 0.251627885844824 0.277060663450231 0.250815545376043 0.244392497416143 0.245642359960023 0.251781084724626 0.247030470708733 0.249447336090201 0.250400042783887 0.251860774086279 0.252563249329254 0.245101073557375 5 5 - 21475045 21475712 21475344.818 21474853 21480385 - gene protein_coding_gene TRUE TRUE AT5G52910.1 ATIM (TIMELESS) homolog of Drosophila timeless similar to Timeless protein; Timeless C-terminal [Medicago truncatula] (GB:ABE87103.1); similar to Os05g0210500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054915.1); contains InterPro domain Timeless protein; (InterPro:IPR006906); contains InterPro domain Timeless C-terminal; (InterPro:IPR007725) -1.15344443119617 -12.8603984680688 8.54134299891366e-08 0.000401528534378931 12.0309896602619 10.0063322709970 -1.15344443119617 0.0680226894477464 AT5G54930_at 5.22348744881399 4.90259099174651 7.28224487910028 7.12337611145887 7.38397897545408 7.31377772973766 3.57120082671326 3.90070804915746 2.41323704052879 2.99681914990674 3.86983100645645 3.53039706641251 4.15432270807331 3.91918864007419 3.61018024343783 4.04190575958617 5.36499844302075 3.87472903035200 2.83580171583683 0.23152351773817 0.230159741954510 0.238467107971196 0.231814624321775 0.239069415991843 0.23932774614315 0.233254390633104 0.228642579577046 0.235963216285857 0.24480980929327 0.236073905437801 0.227946667843847 0.232223212989403 0.234909283329272 0.24027642393743 0.230455752647941 0.248917515744664 0.232211546456813 0.242570915543571 5 5|0 -|/ 22323283 22323753 22323444.3 22322959 22324788 - gene protein_coding_gene TRUE TRUE AT5G54930.1|AT5G54930.2 AT hook motif-containing protein|DNA binding similar to AT hook motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G52890.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 1.21908335544056 12.8277582715400 8.76103604929182e-08 0.000411768694316716 12.0187217851066 9.23482733365648 1.21908335544056 0.0850818544198536 AT5G41900_at 2.41043764041415 1.97120357811425 4.79352268445055 4.67865301324945 6.36811406053846 6.05398548004156 5.13899208690724 5.29119135203348 4.93897025131611 4.75715797209522 8.26568478871884 7.50282407370665 7.59616487800371 8.2840378866835 7.65687857218516 6.55447070361318 6.12241815565019 7.10895712515114 4.30562584426478 0.226597855173991 0.229754065600736 0.220770334110901 0.221982457218311 0.208632034108011 0.224100241785276 0.211113404786537 0.211192658901386 0.212099600951242 0.216722890377500 0.219338112125733 0.214207375241982 0.215482364256649 0.230116337895999 0.213271893417025 0.208632034108011 0.215090260680613 0.213857707822114 0.209685675567758 5 5|0 +|/ 16787455 16788630 16787998.6 16786181 16788924 + gene protein_coding_gene TRUE TRUE AT5G41900.1 hydrolase, alpha/beta fold family protein similar to BDG1 (BODYGUARD1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G64670.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO33147.1); similar to Os10g0532200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065147.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 1.28071489124235 12.8019975807668 8.93877040620068e-08 0.00042003282138737 12.0089971002041 10.6151029263967 1.28071489124235 0.0991050358037362 AT5G02200_at 1.87831679844975 1.89772819286303 2.75460286743735 2.74391316336387 4.08934817182102 3.9251241441262 1.32698195875314 1.41121022377091 2.83858418171594 2.09449294060747 4.53143465827057 3.05551459138269 3.92779976576237 3.89442759861440 3.28606558203735 3.29841347352454 2.70711079931669 3.33521917526867 2.46942932006208 0.201224326203967 0.207598796804099 0.211553871717144 0.204447361883031 0.207985891218542 0.214957922315474 0.206400522864063 0.206355454414260 0.202872633668415 0.202366641384646 0.205052345162617 0.208887305865170 0.207228384004085 0.211349389870961 0.208132363090251 0.204019370884822 0.203765237579441 0.201224326203967 0.206620444199421 5 5 + 438275 438821 438474.182 437458 438892 + gene protein_coding_gene TRUE TRUE AT5G02200.1|AT5G02200.2 phytochrome A specific signal transduction component-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37678.1) 1.04456689162118 12.7745618677560 9.13238923768968e-08 0.000429039646386661 11.9985986677938 5.48940336656516 1.04456689162118 0.0321690904037861 AT5G09530_at 3.63151817021718 3.77501062744873 1.73992234102783 1.41139557838919 2.52534523519965 2.66417696876621 2.76026114932969 1.88313617764941 2.24697072360783 6.61806548564378 1.95331627892695 1.27187522920362 1.81851746600227 1.80364524386403 1.98972919321985 1.77388672175261 1.91352920681604 2.17751676534619 1.8740736047631 0.192221468490958 0.184625693979075 0.185693881038458 0.188775897599584 0.181591011824487 0.184114843486521 0.185849978382767 0.182874721843499 0.181801540657822 0.191308108642585 0.190651408402490 0.181591011824487 0.18565530090346 0.18238556879321 0.189102886136575 0.189716437342559 0.189009836796273 0.185233968294385 0.181776470026928 5 5 - 2960131 2960617 2960314.909 2959735 2961272 - gene protein_coding_gene TRUE TRUE AT5G09530.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G09520.1); similar to hypothetical protein Bcenmc03DRAFT_1196 [Burkholderia cenocepacia MC0-3] (GB:ZP_01566576.1); contains InterPro domain Cell surface antigen; (InterPro:IPR004829) -1.64784074385384 -12.7596016747714 9.23988642498927e-08 0.000433997465381746 11.9929105173236 5.25757342324333 -1.64784074385384 0.165730213674838 AT5G37740_at 7.5617267744122 7.67321612307873 9.02603574055749 9.19819142088354 9.05728207994768 8.72329350580814 3.0616988758562 3.23016254448083 5.16014694194704 3.6967374180303 5.34800825845649 4.9037966162493 4.49554924077051 5.9416405698161 5.73116636609192 5.52982312669902 5.1893890117493 5.26400940342757 4.73588547195782 0.236735223094504 0.231460217668322 0.239019492489488 0.233858384461018 0.235557454947855 0.243846354135517 0.227919654845587 0.227519319926312 0.246302418895496 0.238213877263609 0.228140952686259 0.228823173457498 0.233318012319092 0.236853546089876 0.237796721745483 0.227133970806493 0.228070681087837 0.227133970806493 0.233048559084742 5 5 + 15009383 15010631 15010151.182 15009235 15010901 + gene protein_coding_gene TRUE TRUE AT5G37740.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G66360.1); similar to C2 [Medicago truncatula] (GB:ABE81436.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 1.16127414529974 12.7042541877295 9.64973034581971e-08 0.000453151337039694 11.9717548028877 12.1071239338627 1.16127414529974 0.0738267966507263 AT5G27600_at 5.89711059021306 5.64046163427241 7.7704042719195 7.701505824663 6.88853558940574 6.92743759095669 4.71475861928559 4.42404218386081 3.9274687257023 4.64753175575358 6.14783279070402 5.88397036628675 6.58259942123805 6.14356400918523 5.56866344924412 7.21538439050507 7.12029451571946 6.49636151183363 4.18880820490491 0.221393353481108 0.21967028315056 0.216155210198159 0.212236564818085 0.216586184260167 0.211948222259095 0.22750904792929 0.225357648597434 0.230576004624768 0.224450457142166 0.210700222117219 0.213680656934762 0.220285993024073 0.214619299306262 0.217458421583353 0.210699250729876 0.215500162002323 0.215993756328748 0.221592020676520 5 5|0 +|/ 9745823 9746755 9746316.556 9742579 9747008 + gene protein_coding_gene TRUE TRUE AT5G27600.1 LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. similar to LACS6 (LONG-CHAIN ACYL-COA SYNTHETASE 6) [Arabidopsis thaliana] (TAIR:AT3G05970.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96460.2); similar to AMP-binding protein [Brassica napus] (GB:CAA96522.1); similar to AMP-binding enzyme family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96461.2); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) 1.13552318055049 12.6415556487484 1.01380708250319e-07 0.000475982425235247 11.9475754186686 11.5702503892187 1.13552318055049 0.0684922931902675 AT5G22500_at 1.51521362600432 1.36704240810991 5.00300821914798 5.37437923279479 8.77815419224862 7.49152943487484 1.64266135075861 1.28225508783302 5.06695135698699 3.05617609698083 5.8286127278715 4.19167883065706 1.98120973384279 3.69363054179937 5.54411543878443 2.51132284394901 3.12896438302791 4.6992983672066 2.31135653318924 0.264127772187354 0.264609899159293 0.283662679577289 0.27535612576507 0.267212345030934 0.281221387799499 0.276519666770369 0.264127772187354 0.285535808523938 0.266592337836129 0.264127772187354 0.264127772187354 0.269695483671009 0.27491928485823 0.272497417437599 0.264163878494168 0.264127772187354 0.276064142434499 0.264327583359949 5 0|5 /|+ 7472923 7473864 7473279.889 7470446 7474123 + gene protein_coding_gene TRUE TRUE AT5G22500.1 acyl CoA reductase, putative / male-sterility protein, putative similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44550.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44540.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44560.1); similar to acyl CoA reductase [Simmondsia chinensis] (GB:AAD38039.1); contains InterPro domain Male sterility; (InterPro:IPR004262); contains InterPro domain Male sterility C-terminal; (InterPro:IPR013120) 2.12538061280282 12.6302163622271 1.02292294313153e-07 0.000480160029505941 11.9431780343956 7.76953816269386 2.12538061280282 0.241358036165251 AT5G60490_at 1.43957932324330 1.52757414974390 2.635305532684 2.69353211677415 2.28318853672019 2.52217869015202 1.89991643827953 1.67832001617986 1.85756421362807 1.94898421062248 3.50748794857856 3.72075150726956 3.51564627617624 4.52564179309366 4.25547500476554 4.02186035247677 4.91335746143314 3.75808265203811 2.59172130737586 0.268434961461790 0.269429100526170 0.270520265253671 0.262518259450712 0.262518259450712 0.284366779460654 0.276260780633238 0.263386459138129 0.271186134076259 0.262518259450712 0.267769466375751 0.263851946714772 0.264575554964906 0.282100557265544 0.269630611758099 0.267651252708771 0.269647034210894 0.264511003063431 0.262518259450712 5 5 - 24343176 24343695 24343462.091 24342953 24343928 - gene protein_coding_gene TRUE TRUE AT5G60490.1 FLA12 (fasciclin-like arabinogalactan-protein 12) Identical to Fasciclin-like arabinogalactan protein 12 precursor (FLA12) [Arabidopsis Thaliana] (GB:Q8LEE9;GB:Q94EG7;GB:Q9FKJ8); similar to FLA11 (fasciclin-like arabinogalactan-protein 11) [Arabidopsis thaliana] (TAIR:AT5G03170.1); similar to unknown [Brassica rapa] (GB:ABB97042.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 1.09561442561073 12.5480608206075 1.09169689979833e-07 0.000512333355075357 11.9110923148235 5.16497157631599 1.09561442561073 0.0592834592930859 AT5G57780_at 4.49172613284193 4.55724420009674 2.72822123650317 2.82940033985597 4.53734347042549 4.98351777722646 5.40877854422785 5.41314564609055 6.44889177392261 5.81906237595599 7.635929517181 7.81938472962375 7.38559215155419 7.50381308634549 7.7582356410487 7.6292862336697 5.99527349083436 7.15277553745609 7.25089384308823 0.282460461216231 0.266157075165097 0.287110481477224 0.290338323557142 0.262794368851567 0.286221356323615 0.266724856903714 0.277047859866144 0.264485759649922 0.273804034241161 0.271068034924201 0.269219775260021 0.266458284111294 0.262794368851567 0.272817394042124 0.262794368851567 0.271683211450145 0.267490368105863 0.269562735701468 5 5 - 23422757 23423158 23422980.091 23422550 23423577 - gene protein_coding_gene TRUE TRUE AT5G57780.1 similar to transcription factor [Arabidopsis thaliana] (TAIR:AT4G30410.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19120.1); similar to Os02g0178700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046079.1); similar to Os06g0653200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058239.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) -1.17034614573563 -12.5376934789150 1.10072738720500e-07 0.000516461290076588 11.9070150006992 11.3018316498017 -1.17034614573563 0.0799842877601108 AT5G14450_at 4.33240791775217 4.62875079404023 2.59333244402866 3.21203888168427 3.80420460738791 3.78907569196474 4.443706002316 4.59112038985534 5.21192460159058 4.15387446187778 5.25729925126772 5.28880582651651 4.61876268528503 4.69412616938556 5.09933011972591 4.30445203217913 3.67633382740152 4.90595989790583 4.69320068330033 0.212722726686345 0.212337738833134 0.213144079106156 0.214541472315598 0.216743587281304 0.212778833407802 0.214822338832956 0.212454358636848 0.219992721902929 0.221302765969645 0.211518427813147 0.212740315902144 0.212049923467399 0.211432505049933 0.211432505049933 0.214793855079461 0.212871990362260 0.214046657102617 0.211502693203693 5 5|0 +|/ 4659287 4659979 4659643.3 4658444 4660178 + gene protein_coding_gene TRUE TRUE AT5G14450.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G26430.1); similar to Os07g0586200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060129.1); similar to hypothetical protein [Zea mays] (GB:BAD89850.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -1.36366181422832 -12.5155420945350 1.12029611713473e-07 0.000525530908547902 11.8982817590305 8.63281307869431 -1.36366181422832 0.121456347007141 AT5G08600_at 2.60833965931544 2.08363317270771 4.12916132334882 4.16641248167407 4.65270734105353 4.73443053920996 2.74160322265758 2.82509364636784 2.43309277045389 2.68805264599512 4.42155821496838 4.21834213981835 4.27186922604139 4.06893722057149 4.57652684200689 4.05523152998751 4.47227412149225 3.80904919085895 2.37936027580104 0.255745721793705 0.238663634202207 0.234659881789939 0.239033865652448 0.239901097539669 0.242138816232019 0.235311322547859 0.234659881789939 0.245130665260595 0.244219715410405 0.23600102580722 0.235132056393066 0.242554036408310 0.237923442209623 0.237687145389873 0.242067831704034 0.241000511363347 0.236273904117977 0.236452594832701 5 5 + 2789030 2789674 2789391.091 2786268 2789872 + gene protein_coding_gene TRUE TRUE AT5G08600.1 U3 ribonucleoprotein (Utp) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02400.1); similar to hypothetical protein DEHA0A03355g [Debaryomyces hansenii CBS767] (GB:XP_456468.1); similar to Os03g0343300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050076.1); contains InterPro domain Utp14 protein; (InterPro:IPR006709) 1.22367306273315 12.5006188465601 1.13369283382997e-07 0.000531701939066256 11.8923817095337 6.86111873569261 1.22367306273315 0.0932496313010743 AT5G56860_at 5.67631057908685 5.62588410550391 6.42915134633016 5.86364811965475 6.1287679854618 5.58044256097614 7.58452485926914 7.46157091804421 6.99444486858109 6.71474696691361 6.84483041136472 6.82381212509095 6.59310253293986 6.71000818106998 6.27259463797428 7.42926372112855 6.61140980453612 6.55940591620322 7.15678778224814 0.211369051179571 0.206862317674191 0.213491140271285 0.232741135849205 0.209865546063057 0.219735034421289 0.210509908002922 0.216040475331689 0.211911493603452 0.203930905778215 0.207822793875796 0.204547033660413 0.206682014820140 0.220351109361768 0.215588614591763 0.205015151548199 0.216641499261809 0.209268748422818 0.208712625325103 5 5|0 -|/ 23006870 23007579 23007156.9 23006491 23008693 - gene protein_coding_gene TRUE TRUE AT5G56860.1 GNC (GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED); transcription factor Identical to GATA transcription factor 24 [Arabidopsis Thaliana] (GB:Q5HZ36;GB:Q8VZC1;GB:Q9LV39); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT4G26150.1); similar to zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87039.1); similar to Os06g0571800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057917.1); similar to Os02g0220400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046316.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) -1.45160619998152 -12.4844460071825 1.14840853272740e-07 0.000538488760995879 11.8859725583396 13.1367275370589 -1.45160619998152 0.138239719246587 AT5G61330_at 6.6335669787039 6.45007046153455 6.2084601768517 5.75946000699203 6.44647506682058 6.11748084047843 6.30704406615526 6.73518117669918 6.87713205083007 7.06841571448202 6.85943614711112 7.58498970240953 6.75173065629702 7.03085782585885 7.03051187477469 6.83254314308539 5.81560986683782 6.68181902465483 7.34881007972982 0.206447229235825 0.206140257915293 0.219542755367614 0.217611389176505 0.201820271463896 0.233987422229987 0.224712957316335 0.224433466840440 0.220185585329165 0.206901273537685 0.20839292396006 0.202974605999433 0.223303397983277 0.207477059120865 0.219184757195765 0.204370180351186 0.209613383144679 0.224585413932414 0.220122710240256 5 5|0 -|/ 24674536 24675502 24674942.625 24674374 24678247 - gene protein_coding_gene TRUE TRUE AT5G61330.1 rRNA processing protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47970.1); similar to hypothetical protein DDBDRAFT_0201701 [Dictyostelium discoideum AX4] (GB:XP_645916.1); similar to Os01g0526200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043227.1); contains InterPro domain TRAUB; (InterPro:IPR012617) -1.38146876889149 -12.4769376034624 1.15531101701965e-07 0.000541609804778813 11.8829917071097 13.2929956276841 -1.38146876889149 0.125606063803897 AT5G53760_at 3.78199438770027 3.74545791445982 5.2619491959148 5.23424459061084 5.62418181330576 5.56948298285336 5.28046067473579 5.31994790323723 2.64182684782528 4.35843946869197 6.8263717162528 6.22966863071954 6.76641024886302 7.15917263766528 5.7284535567932 6.55204522269118 6.66654112728436 6.52143716606508 3.81474070305773 0.257373631227376 0.257650441976531 0.260877077775836 0.257565592776506 0.249937414130586 0.257886134277086 0.266291430285449 0.254871332707627 0.27446109225427 0.254463836712359 0.264514062918366 0.249053209894101 0.251211757402993 0.263165114260732 0.250648816495699 0.249053209894101 0.264339267726494 0.25709265878733 0.264808114178986 5 5|0 +|/ 21842806 21843481 21843120.4 21839712 21843677 + gene protein_coding_gene TRUE TRUE AT5G53760.1|AT5G53760.2 MLO11 (MILDEW RESISTANCE LOCUS O 11); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Identical to MLO-like protein 11 (AtMlo11) (MLO11) [Arabidopsis Thaliana] (GB:Q9FI00); similar to MLO14 (MILDEW RESISTANCE LOCUS O 14), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G26700.1); similar to OSJNBb0017I01.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE05742.1); similar to H0901F07.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86271.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 0.989531962876576 12.3979200021719 1.23075482272176e-07 0.000576854785409689 11.8514150351834 10.0578473719273 0.989531962876576 0.0141160661684871 AT5G63790_at 9.04640637944937 9.16179877288962 10.4306127568930 10.5469180178878 10.1697578619161 9.5473022597648 7.97563783261817 8.1004340904785 7.31214258297029 6.91718487768768 9.41965460065649 9.6146827592900 9.57390717978544 9.83313771687848 8.92288872887714 9.8911995546668 9.56222241125871 9.70168091473165 6.66641691590414 0.160270453810821 0.148633064338067 0.146970281789809 0.155016286054112 0.156392945367711 0.144762988044105 0.161666614160440 0.149048086954421 0.176058099279081 0.172101769420004 0.144762988044105 0.156254065914657 0.156009298799393 0.150853200201041 0.154594504213689 0.153812084450112 0.146575166519169 0.151497596357284 0.180676235892336 5 5 - 25544147 25544685 25544334.727 25543735 25545239 - gene protein_coding_gene TRUE TRUE AT5G63790.1 ANAC102 (Arabidopsis NAC domain containing protein 102); transcription factor similar to ATAF2 (Arabidopsis NAC domain containing protein 81) [Arabidopsis thaliana] (TAIR:AT5G08790.1); similar to NAC-domain protein 5-1 [Brassica napus] (GB:AAP35050.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.30234434527586 12.3270566951633 1.30298906933363e-07 0.00061058067788974 11.8227730848453 17.6374434258816 1.30234434527586 0.113462033727617 AT5G10350_at 7.53921668620066 7.38177996416538 7.17127439945732 7.01162846409851 7.54878169479986 7.15318883673184 7.53391103365986 7.72750736385223 7.46237205754034 7.56101922420906 7.83866178159503 7.3975754533187 7.14880792779232 7.78908449558724 7.6066082914445 7.31735973441732 7.60332955747315 7.23286020015734 7.55847563500364 0.159788455261121 0.150094521798833 0.156814775556023 0.159071997621005 0.149786615795835 0.153320105857862 0.156231220444675 0.149227846207234 0.166541248897468 0.152638451345672 0.152734127959165 0.155563672420673 0.150248434568013 0.153989859289773 0.155720103377231 0.150016397737371 0.152381684661961 0.149949403019705 0.153035993179305 5 5|0 -|/ 3255680 3257667 3256572.857 3255435 3257808 - gene protein_coding_gene TRUE TRUE AT5G10350.1|AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -1.16880073570349 -12.2792101456994 1.35436540319223e-07 0.000634520191395558 11.8032589330202 14.8929485066078 -1.16880073570349 0.0855258479631914 AT5G15580_at 3.7419890294638 4.19912256861632 2.03759285265716 2.00695538928636 3.37330163687526 3.15747335838765 3.32319939237107 3.32248381329760 5.71560905362855 4.31922836761469 6.27496028588613 7.15520408322402 5.49416914810604 5.97438651456836 7.20470998017626 6.23931483559985 3.76439970178442 6.13858257631313 6.99581979064074 0.251068138380737 0.251068138380737 0.264113806475126 0.258169733011567 0.254395005069468 0.253813304171432 0.257484649994846 0.251068138380737 0.251919315215056 0.251068138380737 0.251440521421953 0.253196683126686 0.251068138380737 0.251068138380737 0.253957455713377 0.253751663716122 0.251068138380737 0.252713833320604 0.260589313497946 5 5 - 5068510 5069073 5068781.364 5068304 5072495 - gene protein_coding_gene TRUE TRUE AT5G15580.1 LNG1 (LONGIFOLIA1) Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function. similar to LNG2 (LONGIFOLIA2) [Arabidopsis thaliana] (TAIR:AT3G02170.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96924.1); contains InterPro domain Moesin; (InterPro:IPR008954) -1.17097440259685 -12.2089897982619 1.43380175459758e-07 0.000671592741853507 11.7743609429919 8.99906556912037 -1.17097440259685 0.0876436168588802 AT5G60460_at 6.35649153647527 6.67083806855082 7.78595531796631 7.82959406133162 7.7154529140984 7.4331675714973 4.65445929293391 5.07851223588041 5.15685596798604 4.90443488960463 7.67551817211876 8.22960128905799 7.69385978369423 8.0737130046017 7.4171133918126 7.72528024193267 7.41356831251746 6.48595374952341 4.99549414171259 0.25713910088859 0.255072146493498 0.256678765835267 0.253776090054481 0.251712026804879 0.251543814608937 0.276509291553768 0.258923057379000 0.273316036321308 0.259678583475904 0.252972130260957 0.254933345592872 0.25772761022364 0.262271786075632 0.251543814608937 0.252091237456288 0.254224690615035 0.264003753856911 0.256366363774973 5 5 - 24334817 24334982 24334901.818 24334663 24335161 - gene protein_coding_gene TRUE TRUE AT5G60460.1 sec61beta family protein similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.2); similar to Sec61beta [Medicago truncatula] (GB:ABD33060.1); contains InterPro domain Sec61beta; (InterPro:IPR005609) 1.23935700918624 12.1685291549110 1.48186514112218e-07 0.000693957445587516 11.7575689766300 12.9946860379710 1.23935700918624 0.103865096111087 AT5G52050_at 1.27517245458616 1.41513688408149 3.02139574465838 3.31047776188881 2.97119352160132 3.31235260629220 1.99440525400487 2.15461407435276 1.84456993026014 1.69817315682554 3.11519127408828 2.82888573563199 2.93315260765313 2.98551286106410 2.74707977541335 3.4565486614356 3.92674165425606 3.55213330025282 1.88847708511093 0.218446528983408 0.215793924571083 0.218334830791383 0.218216725904074 0.211047804434438 0.227241948469207 0.216740126064303 0.213347674963361 0.227208891122360 0.212892163608531 0.209888870882532 0.215053633536606 0.214219857778943 0.214605275031103 0.217888587144612 0.214367570187304 0.210313945827193 0.217322934666281 0.2177305695954 5 5 + 21157102 21157593 21157328.727 21156088 21157869 + gene protein_coding_gene TRUE TRUE AT5G52050.1 MATE efflux protein-related similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G23030.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE90557.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 1.14301044167523 12.0010026102117 1.70038212252074e-07 0.000796118909764212 11.686926017061 4.93362476657822 1.14301044167523 0.0856952369476158 AT5G03350_at 12.4361123386074 12.7850525013316 12.7188714540432 12.826275394014 12.0058608892135 11.7809447186778 8.43749090779501 8.87508397735107 10.2732547357703 6.67487340391281 10.3487359270329 12.1004229189709 8.28386281204416 10.5634514499325 9.94025070329302 9.74898613485188 9.27592570094672 11.2328477000422 7.52197352967188 0.141855432257049 0.139400716927164 0.142351384830882 0.143462159602713 0.138037036202094 0.139739827850526 0.150148601129060 0.156865022294691 0.14595845863977 0.203054182883286 0.145505955401988 0.141493146918283 0.151223568752337 0.138037036202094 0.144494593112996 0.143550544312033 0.149841744099076 0.138037036202094 0.176782640713797 5 5 - 815813 816278 816046.545 815673 816657 - gene protein_coding_gene TRUE TRUE AT5G03350.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16530.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 1.22818330011649 11.9603715918496 1.75851052361562e-07 0.00082315877610447 11.6695176499487 20.6549670100497 1.22818330011649 0.106026148386629 AT5G19730_at 2.43258923980150 2.69275371432482 2.42304088974694 2.22080959393373 2.31877241817118 2.39002219940278 3.89695868204522 3.82971004840801 3.55760532018670 4.79578805860127 4.68249372268798 5.34891225726606 4.37361715191643 4.02164821589428 5.63529651573755 4.73767361144908 3.36784373039970 4.2284029539706 5.05056687431396 0.243670730262081 0.242182860127899 0.247918508427057 0.247950610003564 0.250612380170721 0.262724225905502 0.242408436033506 0.247897517856513 0.248276523604414 0.247164043383814 0.249188076645325 0.242182860127899 0.245652638240154 0.249035954746395 0.246224702613704 0.250337063327763 0.253355545243099 0.250062846500414 0.243665102300243 5 5|0 +|/ 6672142 6673159 6672545 6670460 6673284 + gene protein_coding_gene TRUE TRUE AT5G19730.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to Os05g0521600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056077.1); similar to pectinesterase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87905.1); similar to Os01g0743200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044216.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -1.04033397087647 -11.9076220756463 1.83722471970740e-07 0.000859821168823062 11.6467544328818 7.28431848370387 -1.04033397087647 0.0594920458161892 AT5G18525_at 5.54328391239372 5.79115464783283 7.02297823040637 6.9637077801492 7.5307956237398 7.41563721398941 3.33978277797626 3.62630549660024 4.12769599608801 4.02899897928445 5.36634519440437 5.4905793361849 5.29283187154615 5.86535247574224 5.15912378991008 5.61509136139221 5.52026582298898 5.48489777289426 4.00512264591143 0.24206681217965 0.244309670203631 0.251933306285148 0.252772345300613 0.244017105140372 0.254874382650186 0.248596141600170 0.241952464080449 0.25661244177123 0.244170346883336 0.245231936544003 0.244428198433901 0.242782178190555 0.242839659330256 0.240996347167115 0.239891083178681 0.251392559547377 0.244418279480885 0.240943329521187 5 5 - 6147057 6147779 6147474.909 6146746 6149757 - gene protein_coding_gene TRUE TRUE AT5G18525.1 WD-40 repeat family protein similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52616.1); similar to BWF1-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52617.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 1.07226258187115 11.9067149687982 1.83861142309955e-07 0.00086028628486828 11.6463613687554 10.6683307904997 1.07226258187115 0.0692888086375214 AT5G26340_at 11.0999587840349 11.1990532338906 12.0831563793466 12.0678823553370 12.008006796417 11.5762986216021 9.48311269385755 9.13233564676455 5.35155217056042 6.52421477343915 7.51617666521161 6.44048964817836 9.03123480002596 8.74988151167545 6.07318694399801 7.96390824341378 9.62542496726219 8.73676035522769 5.57955571565643 0.213643457729148 0.214951440570129 0.219597963794139 0.21773369529438 0.218338880682831 0.223210026975549 0.216249838570278 0.213643457729148 0.266912983587168 0.23036641721435 0.219771800426430 0.247815495137554 0.213643457729148 0.222098667328524 0.250309913745353 0.224716805165297 0.231277316815228 0.220824257292449 0.244818626327426 5 5 - 9244008 9244406 9244224.091 9243514 9247069 - gene protein_coding_gene TRUE TRUE AT5G26340.1 MSS1 (SUGAR TRANSPORT PROTEIN 13); carbohydrate transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose transporter/ sugar porter Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Identical to Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1) (STP13) [Arabidopsis Thaliana] (GB:Q94AZ2;GB:O81501); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT4G02050.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91703.1); similar to hexose transporter [Vitis vinifera] (GB:AAT09979.1); similar to hexose transporter [Solanum lycopersicum] (GB:CAB52689.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829) 1.17750173115476 11.8272375848916 1.96464646706388e-07 0.000919061617292484 11.6117086347606 17.9990124531193 1.17750173115476 0.0978133206018006 AT5G15600_at 3.03770774870022 3.37010716670629 3.41303229865958 3.45808778279425 2.67142109642859 3.06564498205434 5.23843067451782 5.36646908589339 5.8798648572396 5.62815830240759 6.54784067167683 6.57830239410523 5.79144118941678 6.55311091760533 6.66074624469553 6.62954407365932 5.44879433310676 6.82350767532776 5.76878806716734 0.300201430935912 0.284156640653325 0.291225143126722 0.290671027203841 0.285778030028695 0.297446298884617 0.273844023384541 0.273139288808242 0.276919401037526 0.273139288808242 0.273139288808242 0.278215855019603 0.273902271210327 0.27349803757526 0.273139288808242 0.275712440155905 0.278081527929335 0.273139288808242 0.273139288808242 5 5|0 +|/ 5078419 5078837 5078653.6 5078203 5079094 + gene protein_coding_gene TRUE TRUE AT5G15600.1 SP1L4 (SPIRAL1-LIKE4) SPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion. similar to SP1L3 (SPIRAL 1-LIKE3) [Arabidopsis thaliana] (TAIR:AT3G02180.2); similar to hypothetical protein [Sorghum bicolor] (GB:AAD27575.1) -1.15189819622483 -11.8095229124272 1.99400098028e-07 0.000932594258476956 11.6039269216165 9.77166161099633 -1.15189819622483 0.0922765499291078 AT5G22640_at 7.9778073908681 8.16318940472732 7.8149722838586 7.80840999448545 8.4408003593186 8.15321559543815 8.58079760986674 8.54495768344004 8.72292540218797 8.89230987900958 8.62459981141822 9.21624905363939 8.35205716152955 8.45507277263038 9.33021896280932 9.02675915487202 8.39417030752084 8.83315516381532 9.0704004484475 0.146284666570767 0.151556214071402 0.15861927635278 0.158681855396044 0.154672867902876 0.155806851427586 0.155048881918359 0.150258876493826 0.171802083105953 0.145403761965824 0.148821265712612 0.148555867957791 0.156146243512371 0.168739355713645 0.154783836231552 0.143903062161242 0.160762100949044 0.154268761137009 0.147335819738107 5 0|5 /|+ 7533325 7533612 7533484.6 7529371 7533787 + gene protein_coding_gene TRUE TRUE AT5G22640.1 EMB1211 (EMBRYO DEFECTIVE 1211) similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G15140.1); similar to Glutamic acid-rich protein precursor (GB:P13816); contains InterPro domain MORN motif; (InterPro:IPR003409) -1.02939797861917 -11.7805526383915 2.04304036406835e-07 0.000955325674238359 11.5911549460808 17.0226423944559 -1.02939797861917 0.0595466617547966 AT5G53900_at 4.67030078629597 4.86062966350917 4.11151476605219 4.33091432050919 5.51994663681202 5.28775956305746 5.80511500779457 5.45340253552342 5.32848344309383 5.17311696289021 5.58278494191118 6.11586339543102 5.20310529761865 5.04268447724842 5.39415794405223 5.7027388566088 5.23106322183278 4.46439957770184 5.44114143848874 0.252192606615443 0.256839152016426 0.253488836141687 0.242731072403466 0.248745455995431 0.254858650980232 0.257992390557623 0.245444458248588 0.248392745916920 0.258473989355736 0.241791774054970 0.244195557340225 0.244478022669435 0.251720351210271 0.250924108012285 0.246424130093544 0.258245396321374 0.252126468309982 0.262428005575728 5 5 - 21898626 21899113 21898918.364 21898368 21900642 - gene protein_coding_gene TRUE TRUE AT5G53900.1|AT5G53900.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15240.2); similar to Os11g0446000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067826.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93307.2); contains domain gb def: At3g15240 (PTHR13902:SF3); contains domain SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED (PTHR13902) -1.12689781135564 -11.709997078149 2.16805098849562e-07 0.00101356383712170 11.5598095092471 10.3331214077150 -1.12689781135564 0.0885752105560707 AT5G52750_at 9.44271746941525 9.6586250740241 10.7252941055625 10.8251908705656 10.1213292346146 9.87365135375362 5.66933651080428 6.09101608244146 7.17595656201916 5.38835520579494 6.95087583936915 8.14016626035521 6.09422751924057 7.76873503834842 5.69482574651933 7.44285196687434 7.81425907694167 7.30329748583046 4.27719085450725 0.264778343770096 0.268320673728774 0.268036679240228 0.271729550073812 0.261498151018486 0.278253020885348 0.273228008475476 0.274846377855438 0.284247571430639 0.276903308565844 0.268253409588887 0.267166127106714 0.265149721667899 0.275993607481734 0.282559220670035 0.262459378503777 0.274290134634695 0.278407615326222 0.262822394133838 5 0|5 /|+ 21401743 21401975 21401883.222 21401269 21402150 + gene protein_coding_gene TRUE TRUE AT5G52750.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 1.14886172911326 11.6991134123367 2.18806480913553e-07 0.00102270149178995 11.5549437749156 15.4333896247103 1.14886172911326 0.094112696859214 AT5G48030_at 6.81706543905022 6.91041128151434 7.64450319611733 7.6301948081106 6.7690489242214 6.7917271927265 7.5722591085727 7.5144250792605 5.54457432187633 6.74547874117602 5.65989110060266 6.16652373613232 6.95835429222269 6.48221381202792 5.87334394038364 7.27705073912418 7.40352602162976 6.63033517785137 6.76423110791979 0.193962881878144 0.193303250623552 0.197170966214934 0.193303250623552 0.199569384565156 0.193303250623552 0.199877428484587 0.193788300483954 0.230884022947627 0.193303250623552 0.206279819117155 0.209121188946993 0.193303250623552 0.203408585057360 0.203205627519438 0.193635109760222 0.206094373070769 0.200324031747487 0.198239658233489 5 0|5 /|- 19483531 19485111 19484425.714 19483237 19487128 - gene protein_coding_gene TRUE TRUE AT5G48030.1 GFA2 (GAMETOPHYTIC FACTOR 2); heat shock protein binding / unfolded protein binding encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. similar to ATJ1 (Arabidopsis thaliana DnaJ homologue 1), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G28210.2); similar to DnaJ central re (GB:ABE85065.1); contains InterPro domain DnaJ central region; (InterPro:IPR001305); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.934796051279847 -11.6489134301651 2.28301476944972e-07 0.00106685280176385 11.5323946643525 13.6601208334405 -0.934796051279847 0.0195614971413562 AT5G15800_at 1.80847314005869 1.7392064003335 2.7739704734788 2.47963280135219 3.26175163695234 3.38890147188579 3.68699305287922 3.55901184076074 4.15238819022621 4.34776538806077 2.08231514053071 1.69086323504814 2.61680845588535 2.46164517076726 1.80621408299432 4.95880532091343 2.53230949626310 1.79641846612222 3.26352469309937 0.241577660544762 0.232936274469020 0.234131604090322 0.232722834420289 0.23411109367276 0.234630659929336 0.240320762318486 0.250058625203292 0.244536804382969 0.241504654663559 0.235293388180847 0.233376912614133 0.233209285078898 0.242827370701673 0.237662508941985 0.24687546872008 0.234390586631063 0.235998894672038 0.240821957897420 5 5|0 -|/ 5151598 5153589 5152070.444 5151337 5154157 - gene protein_coding_gene TRUE TRUE AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. Identical to Developmental protein SEPALLATA1 (Agamous-like MADS-box protein AGL2) (SEP1) [Arabidopsis Thaliana] (GB:P29382;GB:Q9LFU6); similar to SEP2 (SEPALLATA2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02310.1); similar to MADS-box protein SEP1-a [Brassica oleracea var. botrytis] (GB:CAD48303.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -1.01609987495377 -11.5805606661923 2.41957785259141e-07 0.00113042677273071 11.5014084078039 6.0444418579765 -1.01609987495377 0.0609336302811017 AT5G62130_at 5.0183400174174 5.01863924720975 6.64956767961409 6.89685292171898 6.07220963658245 5.86133869723382 7.6432384772651 8.09954869034827 6.26826787460583 5.77599737882676 6.15888813495095 5.77372969922756 6.13202488881028 6.53358704997293 4.78424052130076 6.7206290926086 5.76508003982694 5.13547843835138 5.97881577366591 0.276652811872964 0.261359654486018 0.278824987652848 0.261598329775419 0.258634978853474 0.264614128677042 0.269929891224263 0.256783941678431 0.274814773451669 0.264440353278391 0.261216937370619 0.256783941678431 0.256783941678431 0.256783941678431 0.266333900525835 0.256783941678431 0.275916081001193 0.274913753679547 0.256783941678431 5 5 - 24967931 24968638 24968216 24967543 24970417 - gene protein_coding_gene TRUE TRUE AT5G62130.1 Per1-like protein-related similar to Per1-like family protein [Arabidopsis thaliana] (TAIR:AT1G16560.3); similar to Per1-like family protein [Solanum tuberosum] (GB:ABB72805.1); contains InterPro domain Per1-like; (InterPro:IPR007217) -1.14377276852018 -11.5255960834337 2.53584242914396e-07 0.00118449199865314 11.4762520467999 12.3490423753391 -1.14377276852018 0.096947014999683 AT5G58770_at 6.42326648425075 6.74558001463659 8.6455333910416 8.93337686603271 7.28629839098474 6.69583097810989 10.5607063686027 10.5131346036333 9.0516797056173 9.7993157312454 8.72873176614873 8.00353495140773 9.48643104897943 9.58183260599156 6.97463750863837 10.4815507712897 10.1687882838739 9.6441405232276 9.37798512124503 0.241108935723544 0.227959923219176 0.223208418962790 0.236869002895550 0.225162742252678 0.239392382335884 0.225734492440383 0.226584491104283 0.247475991165699 0.223208418962790 0.228628991168108 0.229726216005679 0.223208418962790 0.223801310571326 0.237983292886624 0.224056296508986 0.230848316531873 0.223208418962790 0.223316757437856 5 5 + 23751955 23752685 23752388.455 23751602 23752860 + gene protein_coding_gene TRUE TRUE AT5G58770.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative Identical to Dehydrodolichyl diphosphate synthase 2 (EC 2.5.1.-) (Dedol-PP synthase 2) [Arabidopsis Thaliana] (GB:Q56Y11;GB:Q9LUY4); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58782.1); similar to Os01g0857200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044851.1); similar to Di-trans-poly-cis-decaprenylcistransferase [Anabaena variabilis ATCC 29413] (GB:YP_321433.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) -1.28154477183411 -11.5169348612278 2.55471109791544e-07 0.00119305008272651 11.4722683370002 17.4971489464018 -1.28154477183411 0.126892232401396 AT5G07440_at 5.8384414096946 5.62456889184130 6.66690873734943 6.57428526652445 6.29066924878458 5.95482836366565 4.30570759985532 4.11962464511545 3.00616888077877 3.42454416559093 6.01656901176054 6.45831627133561 5.94367335596614 6.40216258210719 6.42568053981705 5.76648455651885 6.23929225861093 5.12385927611227 3.79654012598196 0.246651281334512 0.245496950570307 0.245340889306096 0.251351594423206 0.243683594050126 0.242393080561097 0.252791236869610 0.247744841693656 0.278561037106871 0.254359219706464 0.244328651680094 0.241636048139136 0.241636048139136 0.241636048139136 0.243288121683899 0.241636048139136 0.255576089961355 0.253389786047079 0.254909773036377 5 5 + 2357269 2357962 2357668.818 2355938 2358195 + gene protein_coding_gene TRUE TRUE AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); oxidoreductase Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2) (GDH2) [Arabidopsis Thaliana] (GB:Q38946); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to GDH1 (GLUTAMATE DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G18170.1); similar to glutamate dehydrogenase [Brassica napus] (GB:BAB62170.1); similar to Glutamate dehydrogenase A (GDH A) (GB:O04937); similar to NADH glutamate dehydrogenase [Vitis vinifera] (GB:CAC18730.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) 1.06646680574635 11.5140934970445 2.56093429654702e-07 0.00119570022305780 11.4709602899342 10.3999238315101 1.06646680574635 0.077727657312444 AT5G03240_at 10.8671970911430 10.8037662564274 11.9382183146162 11.8735909995323 12.2668316949162 11.8520393112318 10.4109177292054 10.0187873351136 9.16703393670567 8.98491403432408 10.9619607139295 10.6803550151713 10.9804530060178 10.9771524946665 10.8991841072017 10.8974685025414 11.1459777428495 11.0357985865854 8.53147609198103 0.13372014818392 0.131123995071118 0.131123995071118 0.132151325937912 0.138312563286821 0.138631252743690 0.133760552635015 0.131123995071118 0.151726993540750 0.164000733870231 0.133299106350727 0.133467525672835 0.131123995071118 0.134355621978474 0.133948269309948 0.131123995071118 0.139874136672911 0.137842852909544 0.168396330540352 5 5 - 772158 772857 772640.667 771724 773514 - gene protein_coding_gene TRUE TRUE AT5G03240.1|AT5G03240.2|AT5G03240.3 UBQ3 (POLYUBIQUITIN 3); protein binding encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 1.14083609859060 11.3649083672676 2.91203074487873e-07 0.00135933595170939 11.4014632110031 21.1748028209186 1.14083609859060 0.100015883817692 AT5G57630_at 9.85898533831777 10.0105168962714 10.2396548567126 10.2580886603479 11.2445668636161 10.8577795975758 8.0054871148889 7.8086250482668 5.88069512196450 5.91522169919154 7.55610887927279 7.72378674305524 8.26816596918902 8.43314138117314 6.98586469918089 7.75174707481924 8.40213158948796 8.2017746573761 5.58961915457933 0.209303082649342 0.208619342672846 0.208748020298830 0.206281155424028 0.222187562752158 0.209081391465639 0.204532770889946 0.208761149683776 0.213483052819004 0.224158825992576 0.205451772215561 0.2046016235034 0.202422947476625 0.212754000479522 0.223500843590529 0.209220608778256 0.215675939541318 0.202422947476625 0.224516621340143 5 5|0 -|/ 23358328 23359329 23358983.778 23358073 23360484 - gene protein_coding_gene TRUE TRUE AT5G57630.1 CIPK21 (CBL-INTERACTING PROTEIN KINASE 21); kinase CBL-interacting protein kinase similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to Os12g0132200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066079.1); similar to Os02g0178000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046073.1); similar to CBL-interacting protein kinase 24 [Populus trichocarpa] (GB:ABJ91230.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 1.05841982922165 11.3531117509028 2.94194782128824e-07 0.00137300704819522 11.3958986173844 16.6407224383860 1.05841982922165 0.0796165587347022 AT5G64530_at 3.36949863425196 3.52809248962676 6.63322191241758 7.21292313769921 5.26450252211751 5.5614619048006 4.51145413979843 4.33689304748601 2.54441175819629 3.73756096123161 5.46947942885633 4.82851137927202 5.20954360626857 5.90556911255164 3.70648392819416 4.52033756761427 5.24711203641523 4.76941785001992 2.82611548618455 0.251576284716282 0.250177200576885 0.270683432440235 0.273545102571094 0.253941827283570 0.258717400265884 0.254077424952691 0.252868479055156 0.271538654242012 0.258421947487714 0.252289768566481 0.251069108150338 0.254918334057429 0.259704683439112 0.254477330080781 0.253049648845422 0.253962623596394 0.254074981560978 0.256090103567678 5 5|0 +|/ 25812622 25813854 25813303.6 25812459 25814164 + gene protein_coding_gene TRUE TRUE AT5G64530.1 ANAC104/XND1 (Arabidopsis NAC domain containing protein 104); transcription factor similar to ANAC025 (Arabidopsis NAC domain containing protein 25), transcription factor [Arabidopsis thaliana] (TAIR:AT1G61110.1); similar to Os02g0555300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047122.1); similar to H0315A08.3 [Oryza sativa (indica cultivar-group)] (GB:CAH67573.1); similar to OSJNBa0006B20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAD40817.2); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 1.22526693373042 11.3141724603083 3.04309751928580e-07 0.00141990930249875 11.3774576605193 9.04879910628467 1.22526693373042 0.119878548260483 AT5G24380_at 5.71317908748881 5.69711482235073 5.51267413862732 5.57561085409804 6.34961150252337 6.72699049862066 6.54486681412988 6.9112907852526 4.80600799150004 5.66393824029997 4.58522102223795 4.40270465727913 5.4879079923571 5.22288437232091 3.52648544932571 5.72267736618943 6.48257723525721 5.1218227774265 4.82991365859077 0.253057582801450 0.249595972759035 0.24886249086106 0.259993762585085 0.25474021229508 0.259359373650313 0.250525410056793 0.250338353324607 0.256968794147702 0.24886249086106 0.262581052484164 0.255180816657446 0.255389526555429 0.253573357302189 0.275688416089563 0.248956110286573 0.252971347363008 0.262348867877258 0.24886249086106 5 5 + 8325935 8326503 8326276.091 8323898 8326708 + gene protein_coding_gene TRUE TRUE AT5G24380.1 YSL2 (YELLOW STRIPE LIKE 2); oligopeptide transporter closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1 similar to YSL3 (YELLOW STRIPE LIKE 3), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53550.1); similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABD04075.1); similar to putative YS1-like protein; VvYS1 [Vitis vinifera] (GB:AAT09976.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABB76763.1); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -1.09704849273909 -11.2701826966064 3.16193744024065e-07 0.00147504381587226 11.3564895713039 11.2134115158095 -1.09704849273909 0.0917190573800966 AT5G13140_at 5.06572430853559 5.51199257902086 1.40494438035765 1.55055454277185 2.66509242547224 2.98917939415917 2.78130205434509 3.18165772051786 5.03195937696161 5.03881005775688 7.46006090797568 8.93288599322424 5.29956804252106 6.42399414058148 9.18855391746654 6.33755371709357 3.31129855594758 6.70098053969677 6.23179391618291 0.252186562830685 0.255850582367276 0.268476482813933 0.261118684059218 0.249376823868183 0.259054447280663 0.243387788275135 0.245000918907380 0.269148400161998 0.248287650707774 0.246912940035258 0.245065823825179 0.248440103589714 0.24952702655997 0.249932168815196 0.250051830230002 0.257864561650877 0.246762818099989 0.24686723679033 5 5 - 4170714 4171187 4170985.636 4170563 4171797 - gene protein_coding_gene TRUE TRUE AT5G13140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26960.1); similar to Os09g0508200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063620.1); similar to Os12g0472800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066754.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96850.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) -1.22085832341373 -11.2419657175972 3.24081795776748e-07 0.00151151749550275 11.3429636281710 9.21433080587112 -1.22085832341373 0.120602428593304 AT5G44130_at 7.84673730625735 7.96727887910892 6.17504922928365 6.47297598072499 6.87573972083156 7.37791181407794 8.8724388314908 9.16923481221852 9.4356764190234 9.1505051026618 11.0064278404855 10.1387869340643 10.2500233114115 10.4381882857403 10.3717714473350 10.0083871047568 9.54718168854484 10.3938234835389 9.24562409105116 0.172355624164645 0.176090338687410 0.194194843850396 0.192844388018943 0.178797368841665 0.185416962774333 0.164396305692648 0.170655934912957 0.170974216465203 0.169949272090793 0.170447376174622 0.172940047929866 0.168954411233367 0.173868268131873 0.174514248211398 0.167760887307240 0.173188461336408 0.170241499006326 0.164298326903739 5 5 + 17778567 17779015 17778773.364 17778317 17779230 + gene protein_coding_gene TRUE TRUE AT5G44130.1 fasciclin-like arabinogalactan-protein, putative Identical to Fasciclin-like arabinogalactan protein 13 precursor (FLA13) [Arabidopsis Thaliana] (GB:Q9FFH6); similar to FLA9 (FLA9) [Arabidopsis thaliana] (TAIR:AT1G03870.1); similar to unknown [Brassica rapa] (GB:ABK78690.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -1.19038342901137 -11.1899034526645 3.39203277037320e-07 0.00158170488082502 11.3178500869823 17.3679669715309 -1.19038342901137 0.115254313259255 AT5G03555_at 6.21428860564876 6.82413642911712 6.18386233763604 7.14316104658872 6.34130887897605 6.16897493898926 8.63927388808151 9.00674839715469 8.3078758370512 8.49400589791502 8.24570144300266 8.28892620513859 8.76035627915895 8.07930502429686 7.94054434537284 8.80968875909102 8.082988871487 8.36625221836945 8.93917601254488 0.230068259795978 0.23121572661385 0.245616244005529 0.223572633960875 0.223089357705412 0.242413909549940 0.221456495109944 0.220828346291931 0.225892308207560 0.219733440481763 0.225127359049879 0.219185249220438 0.219877431106756 0.220380150098117 0.225309548203831 0.223276671118860 0.225558374825654 0.225773898423290 0.220848721116685 5 5 - 898371 898921 898697.091 898240 900158 - gene protein_coding_gene TRUE TRUE AT5G03555.1 permease, cytosine/purines, uracil, thiamine, allantoin family protein similar to cytosine/purines, uracil, thiamine, allantoin transporter [Alteromonas macleodii 'Deep ecotype'] (GB:ZP_01111046.1); similar to Os02g0666700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047676.1); contains InterPro domain Permease for cytosine/purines, uracil, thiamine, allantoin; (InterPro:IPR001248) -1.68577131269442 -11.1668851140866 3.4613205442496e-07 0.00161366763772916 11.3066811857954 15.5162558031457 -1.68577131269442 0.208880985280352 AT5G15640_at 5.83934956152366 5.6227793608447 6.90173923142375 7.08092607913731 7.15551722297145 6.88264644555012 4.59672002812221 4.45547291719096 3.84199372574970 3.37805881768007 5.67510089504527 5.46324624718735 5.36344153274893 5.89828347402638 5.61535808984393 5.28027079275977 5.70900384536488 5.6523045821764 3.32029304392629 0.212635364769264 0.211281229794182 0.227810904857550 0.222333844867337 0.219249703078153 0.235731312916619 0.217163572276983 0.218610656220005 0.231240709333536 0.219289791818951 0.223091843374804 0.213898809049999 0.222518244437665 0.211807783763503 0.218810315595602 0.218169741095837 0.216680205484943 0.218809635327507 0.225228921042868 5 5|0 +|/ 5088562 5089482 5088978.9 5087374 5090043 + gene protein_coding_gene TRUE TRUE AT5G15640.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96928.1); contains InterPro domain Retrovirus capsid, N-terminal core; (InterPro:IPR008919); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.00849420082556 11.0975200636762 3.67959066536275e-07 0.00171505720912558 11.2727793259631 10.6146812116019 1.00849420082556 0.0720663672698356 AT5G15630_at 0.957408674293382 1.26527329437328 3.15922519492389 3.50933617952647 2.40667978968719 2.36302645439007 1.73320499791729 1.46086765499487 1.04555420285783 1.48326607033182 1.96831340615856 2.37169555889065 2.11282093491674 2.22550778436491 2.36892109303707 2.06295668320596 4.91920843761024 1.84025545754735 1.87406916312647 0.250076878753953 0.24402159624242 0.258488595659652 0.265578994760289 0.250420331523807 0.260623641559234 0.248842536744298 0.244522736293232 0.261845129933142 0.255132234171254 0.244290104997668 0.248155722764944 0.24402159624242 0.24873366720294 0.246584926678697 0.250214322913858 0.266454571157641 0.247973627202912 0.24402159624242 5 5|0 +|/ 5085784 5086521 5086206.778 5084707 5086795 + gene protein_coding_gene TRUE TRUE AT5G15630.1 COBL4/IRX6 (COBRA-LIKE4); hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. Identical to COBRA-like protein 4 precursor (COBL4) [Arabidopsis Thaliana] (GB:Q9LFW3;GB:Q6ICX3); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 [Arabidopsis thaliana] (TAIR:AT3G29810.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96834.1); similar to brittle stalk-2 [Zea mays] (GB:ABJ99754.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13305.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cytokine, IL-1 related; (InterPro:IPR008996); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) 1.08507593273466 11.0646596202700 3.78817758910328e-07 0.00176529075652213 11.2565896749781 4.08254764579921 1.08507593273466 0.0937425417935114 AT5G12440_at 4.30998714567666 4.2578426482089 4.75861776158834 4.87767193864232 6.72943727523922 6.35259806543751 3.28882403229299 3.47993344651624 3.85580758094407 3.09326750114282 5.80205511719204 5.84935771561453 5.20777307950017 5.90347041056719 5.51195529907408 4.73792229945774 4.82214492149816 5.12842301406677 3.40753725826117 0.22578826974355 0.222970811081258 0.233771308697749 0.226553376785744 0.235738977729115 0.24799779965361 0.227007351562979 0.227627718315544 0.239242906658799 0.227837753795388 0.228008352458859 0.225418092943004 0.235266706951446 0.222970811081258 0.222970811081258 0.224785851169549 0.246421795589635 0.223907444355309 0.224872316711706 5 0|5 /|- 4035903 4036459 4036199.1 4035295 4038798 - gene protein_coding_gene TRUE TRUE AT5G12440.1 zinc finger (CCCH-type) family protein similar to RNA binding [Arabidopsis thaliana] (TAIR:AT3G21100.2); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14273.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 1.02005250313921 11.0591462302813 3.80673542820361e-07 0.00177355803600006 11.253865149588 9.16815996198562 1.02005250313921 0.0765018170280073 AT5G52570_at 3.53758136750943 3.32622187609804 3.81206319446538 4.46917825956768 3.61703821966602 3.98525937950225 7.49362645968669 7.14044836341197 7.24181372356185 6.50752598878299 7.84674733501966 8.75133888778749 7.03315057023156 7.59404447969826 8.28819562930184 8.6287346402672 6.1421938247998 7.18213049664133 6.93643030910543 0.285508021823542 0.281526795538455 0.283255936036231 0.278168168908282 0.274176149611095 0.298032321747912 0.280509819961028 0.270451126456442 0.280726897585736 0.270632497376872 0.276384423464777 0.272169810462436 0.269258317492540 0.277013371561725 0.269258317492540 0.27692871450343 0.277902101062438 0.282435638850087 0.275026969008402 5 5|0 -|/ 21352139 21353753 21352840.125 21352019 21354228 - gene protein_coding_gene TRUE TRUE AT5G52570.1 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); beta-carotene hydroxylase Converts β-carotene to zeaxanthin via cryptoxanthin. similar to BETA-OHASE 1 (BETA-HYDROXYLASE 1), beta-carotene hydroxylase [Arabidopsis thaliana] (TAIR:AT4G25700.1); similar to putative beta-carotene hydroxylase [Brassica rapa] (GB:AAS55552.1); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Carotene hydroxylase; (InterPro:IPR005596) -1.33573775880687 -11.0407931400929 3.86922673118982e-07 0.00180228581138822 11.2447786692051 11.961963968381 -1.33573775880687 0.148544485890596 AT5G46860_at 8.59835624356533 8.60283751996403 9.52473964021827 9.46128695800655 9.92323077790042 9.65699051432307 7.24675219880687 6.87503999569448 6.86045977607832 6.57885183617476 8.63576567606263 8.69394949135336 8.5898803269587 8.62309715408649 8.51535887371869 8.38057388832054 8.66976101611598 8.60467341139325 6.23820420224633 0.186352997066238 0.189228675322039 0.193417448281487 0.191966555099262 0.208399795654596 0.193603071416389 0.193467822772176 0.195518708638677 0.213451333062983 0.213012412501181 0.179556192943960 0.179556192943960 0.179556192943960 0.179556192943960 0.190420843303393 0.182026041917501 0.181964374434432 0.182417590512064 0.217777537361361 5 5|0 -|/ 19029572 19030421 19029880.7 19029248 19031231 - gene protein_coding_gene TRUE TRUE AT5G46860.1 VAM3 (syntaxin 22); t-SNARE Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Identical to Syntaxin-22 (AtSYP22) (AtVAM3) (SYP22) [Arabidopsis Thaliana] (GB:P93654); similar to SYP23 (syntaxin 23) [Arabidopsis thaliana] (TAIR:AT4G17730.2); similar to syntaxin-like protein [Solanum tuberosum] (GB:ABA46757.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 1.02821575130416 11.0188026349882 3.94557584184948e-07 0.00183745466954930 11.2338567591660 16.3103064400187 1.02821575130416 0.0798868322779547 AT5G37780_at 10.8871914291371 10.7973810651206 11.7127477157996 11.6310204247696 11.8506909964215 11.4754088069106 9.61750073330116 9.36946189413475 8.58802592982475 8.68818664469687 10.6240155060483 10.5376457101363 10.5249830265404 10.3522642244291 10.7653543752602 10.237254657367 10.3225172464649 10.3656288752919 8.57621535883511 0.106179531531653 0.103816921951435 0.103816921951435 0.105215984300255 0.105295285367402 0.11362044584936 0.106111395716126 0.108096802632252 0.131323750706815 0.122885700168820 0.103816921951435 0.103816921951435 0.108543023925430 0.108896459178490 0.105033570098545 0.105435898391698 0.107549134856021 0.106338548118295 0.123119888474793 5 5 - 15022055 15023322 15022428 15021757 15023435 - gene protein_coding_gene TRUE TRUE AT5G37780.1 CAM1 (CALMODULIN 1); calcium ion binding encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. Identical to Calmodulin-1/4 (CaM-1/4) (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.02900173359463 10.9986259039662 4.01706991380619e-07 0.00187034775186816 11.2238024112066 20.4595173484383 1.02900173359463 0.080634047448668 AT5G46580_at 7.34055480893405 7.7964141127242 7.44549074650347 7.25568663473862 7.85919083579697 7.30045597809119 7.7739007416661 8.14698321700322 7.83631300421707 8.1363388793761 7.00479713979071 7.74094461869664 7.42932480561007 7.43236067631577 7.97466724653068 7.8624130671984 7.5083293288896 7.28689585305992 7.79690123708324 0.204384174346286 0.191047792569031 0.200294926630049 0.203195452986583 0.193622290205001 0.202684761573338 0.202359360388003 0.189837024722427 0.195973267084905 0.185836173492390 0.193254937669216 0.191762495257307 0.190958230608128 0.202717519030914 0.185836173492390 0.185836173492390 0.197002540508625 0.195735167238263 0.186424108289638 5 5 - 18914741 18915143 18914960.273 18914672 18916872 - gene protein_coding_gene TRUE TRUE AT5G46580.1 pentatricopeptide (PPR) repeat-containing protein similar to chloroplastic RNA-binding protein P67, putative [Arabidopsis thaliana] (TAIR:AT4G16390.1); similar to putative chloroplastic RNA-binding protein, with alternative splicing isoforms [Oryza sativa (japonica cultivar-group)] (GB:AAS01974.1); similar to hypothetical protein MtrDRAFT_AC146791g19v2 [Medicago truncatula] (GB:ABE88021.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -1.30690930749502 -10.9805562906322 4.08229395271497e-07 0.00190030783498882 11.2147709416450 15.3414101172174 -1.30690930749502 0.144291530016164 AT5G46240_at 6.62653357674318 6.9145614271862 8.58677468797231 8.61221664508355 8.21379139160571 7.89541036109737 5.44910732530111 5.80566245983278 3.64700500731078 5.3387810384186 6.93525526103963 6.99709767450662 6.98859511570274 6.04753683017792 6.47123874779554 6.78700803833488 7.89511334753464 8.10107887294763 5.6958468011268 0.203670241782935 0.198734313764769 0.195753795880192 0.197044499775424 0.195753795880192 0.195846939813416 0.199231444930849 0.205732104463579 0.226573529322906 0.202649670333192 0.195753795880192 0.199705289684666 0.201360501805289 0.197587176552125 0.203155339436447 0.195753795880192 0.196838196268903 0.201291813897439 0.212423725045364 5 5 - 18760939 18761527 18761132.818 18760793 18763957 - gene protein_coding_gene TRUE TRUE AT5G46240.1 KAT1 (K+ ATPase 1); cyclic nucleotide binding / inward rectifier potassium channel potassium channel protein (KAT1) Identical to Potassium channel KAT1 (KAT1) [Arabidopsis Thaliana] (GB:Q39128;GB:Q42426); similar to KAT2 (K+ ATPase 2), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18290.1); similar to inward rectifying potassium channel [Brassica rapa subsp. pekinensis] (GB:AAX19659.1); similar to inward rectifying shaker-like K+ channel [Vitis vinifera] (GB:AAL09479.1); similar to inward rectifying potassium channel [Vitis vinifera] (GB:AAL24466.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 1.08560941120305 10.9503905604020 4.19375968135867e-07 0.00195177575570432 11.1996362957694 13.2238787851646 1.08560941120305 0.0966793976101821 AT5G60540_at 8.55322428871387 8.66603378517151 9.57176645303541 9.34667564868002 10.1283967835139 9.82675993545064 8.0568544373358 7.8572298348651 5.15137198460639 6.12501097748745 7.70623545503454 7.36510006237417 8.28658143119005 8.31220126960597 7.73296163610041 7.41640147374814 8.75447618714081 8.00094510983335 5.237153569321 0.169823430104042 0.154971635313623 0.157610470879366 0.155062001714302 0.164272165346447 0.155211723010159 0.167358259031763 0.160896720051488 0.176197429556137 0.159953004709743 0.160056483849599 0.158908763872514 0.160162212886801 0.159783072807406 0.162899891551486 0.159241022699995 0.169838935372783 0.163878920081036 0.166330226627835 5 0|5 /|- 24354105 24355127 24354553.111 24353849 24356028 - gene protein_coding_gene TRUE TRUE AT5G60540.1 ATPDX2/EMB2407/PDX2 (PYRIDOXINE BIOSYNTHESIS 2); glutaminase/ glutamyl-tRNA(Gln) amidotransferase/ protein heterodimerization Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex. Identical to Pyridoxal biosynthesis protein PDX2 (EC 2.6.-.-) (Probable glutamine amidotransferase) (AtPDX2) (Protein EMBRYO DEFECTIVE 2407) (PDX2) [Arabidopsis Thaliana] (GB:Q8LAD0;GB:Q56ZP9;GB:Q9FKJ3); similar to SNO glutamine amidotransferase; CobB/CobQ-like glutamine amidotransferase [Medicago truncatula] (GB:ABE80773.1); contains InterPro domain SNO glutamine amidotransferase; (InterPro:IPR002161) 1.00156784866225 10.8673987818869 4.51785836506874e-07 0.00210215949726649 11.1576248491960 15.7265551484791 1.00156784866225 0.076267179779977 AT5G61130_at 4.09619768901301 4.91351292762744 3.51554029668913 3.81891787111272 3.53166193004281 4.63867672214379 6.15255044611635 6.42394865425386 5.87363059409849 6.56253050406417 6.08867027555004 6.62231487037916 5.90580430595707 5.48098194534874 6.7801711496661 5.84199751330061 5.51101045410062 5.99913011864391 6.32864605256876 0.217090254024720 0.229227342049089 0.224316460171131 0.227930306161125 0.226650598349629 0.230483665709908 0.220936475612830 0.234723799660352 0.227885487210701 0.217090254024720 0.217090254024720 0.22121018168086 0.220932986369056 0.229643735585465 0.223163813331875 0.217090254024720 0.226911466276105 0.218842989715297 0.22353020841255 5 5|0 -|/ 24604679 24606040 24605059.111 24604439 24606806 - gene protein_coding_gene TRUE TRUE AT5G61130.1 glycosyl hydrolase family protein 17 Identical to Glucan endo-1,3-beta-glucosidase-like protein 2 precursor [Arabidopsis Thaliana] (GB:Q9FNQ2); similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT5G08000.1); similar to putative glycosyl hydrolase family 17 protein [Medicago truncatula] (GB:ABE90942.1); contains InterPro domain X8; (InterPro:IPR012946) -1.84594099375274 -10.7278439896754 5.12591199868462e-07 0.00238457426178809 11.0857276836248 10.7782237151393 -1.84594099375274 0.248330782773111 AT5G50335_at 4.1342559343773 4.25885732334265 1.62587810855691 1.99738495871531 3.08845156373526 3.33774596639003 2.34337945077927 2.35309653609196 2.27690960721141 2.23204962818909 8.38456772384885 8.05533137841342 6.7651861066533 7.47650488087283 8.38875737156864 7.76406462366446 5.87431463317461 7.414538086716 5.15553666295644 0.385021931238336 0.385021931238336 0.410491452470062 0.398875532746706 0.385021931238336 0.387876790744235 0.387266676238607 0.395283662523876 0.413074563051739 0.393069164938430 0.391213948767404 0.393255311044404 0.390589192398926 0.385021931238336 0.400721408338959 0.394749180161788 0.385021931238336 0.392146784470391 0.385021931238336 5 5 - 20506665 20506770 20506695.273 20506320 20506953 - gene protein_coding_gene TRUE TRUE AT5G50335.1 unknown protein 0.995024235326555 10.6445455396333 5.53085069414474e-07 0.00257239865784672 11.0420504414918 8.26083459694841 0.995024235326555 0.0803884954661223 AT5G59670_at 8.94091398429693 8.95495428025827 8.9225077487561 9.07842282668504 7.49916793966355 6.76447836796772 7.39718814348156 6.96872448354646 7.96874739097656 5.7482453358283 5.26251317884569 6.95477388804004 5.51693263238505 6.9056433688453 4.65769837010513 6.60757671599413 6.37610373502959 6.6889661725047 6.31481843019046 0.242579859124281 0.244670290106989 0.239255653800078 0.239255653800078 0.242893292654923 0.266258631918869 0.239255653800078 0.240464165256159 0.25531890274344 0.249627878461611 0.245429816776956 0.239255653800078 0.252331783172194 0.250353398167094 0.260731021238393 0.239255653800078 0.246749612763361 0.246152064717238 0.240996982141147 5 5 + 24062079 24062662 24062383.364 24058720 24062878 + gene protein_coding_gene TRUE TRUE AT5G59670.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59680.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90328.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -1.29168566652842 -10.6312861544836 5.59845601320204e-07 0.00260328204613895 11.0350445722632 14.4650679185239 -1.29168566652842 0.149655419621820 AT5G55560_at 4.74050080800884 4.91239918259658 7.08151349572831 7.17089290163192 6.16393930867323 6.37190039168607 3.10942910891721 3.23663327562313 1.92433264948220 2.46293490482890 2.47190587574301 2.57241868526628 3.08614424137109 2.76999169366988 2.15799701828686 2.93942667705911 3.63989362647583 2.70319013850266 2.25750781428703 0.235836429505019 0.225038295713718 0.229666508209172 0.223723077774261 0.223904671246856 0.236814683308084 0.221346023529351 0.233072275864417 0.242663058292621 0.225442415243415 0.223045126063844 0.224840803381214 0.227491538821289 0.223077753139224 0.230672094783016 0.222239182877510 0.236418150669927 0.231390996548996 0.225469049749656 5 5|0 -|/ 22523774 22524329 22524047.2 22523528 22525105 - gene protein_coding_gene TRUE TRUE AT5G55560.1 protein kinase family protein similar to WNK3 (Arabidopsis WNK kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT3G48260.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81462.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.913093719997151 10.6196583898496 5.65848150166286e-07 0.00263062805012306 11.0288886641718 7.8521741178146 0.913093719997151 0.0538882446209885 AT5G17170_at 10.2998515009591 10.4394163174769 10.6327404087404 10.6071745684753 9.39465153098227 8.89549083255561 11.6190328569510 11.6959344826392 9.84706451299138 10.6490752106385 10.8315437988178 10.6975337122671 10.0381197209584 10.3354372615672 10.8921914941689 10.2700668849178 10.293538288153 11.0931999996606 10.1400905166161 0.104843412940694 0.105058815686643 0.107226591934150 0.105988748717547 0.105756281016763 0.115778530869552 0.107930571660717 0.105670337905044 0.112983753881861 0.109316687964487 0.106180243646178 0.104273162807795 0.113308512272518 0.107290552814724 0.107509701978406 0.104273162807795 0.115111743695763 0.106763079522641 0.115414629044916 5 5|0 +|/ 5649743 5650950 5650508 5649195 5651160 + gene protein_coding_gene TRUE TRUE AT5G17170.1|AT5G17170.2 rubredoxin family protein similar to rubredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G51010.1); similar to Os08g0162600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061060.1); similar to PREDICTED P0577B11.138 gene product [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53651.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Rubredoxin-type Fe(Cys)4 protein; (InterPro:IPR004039)|similar to binding / protein binding [Arabidopsis thaliana] (TAIR:AT1G55480.1); similar to Os08g0162600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061060.1); similar to PREDICTED P0577B11.138 gene product [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53651.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478) -1.02231628066257 -10.5383505710589 6.09827136415043e-07 0.00283447653005712 10.9855241051131 20.8323018832537 -1.02231628066257 0.0907848152696666 AT5G01015_at 4.03890863277949 4.74724542739366 1.82897472201451 1.89643456651700 2.44268699716817 2.54726653520435 4.63885047035773 5.08001781047401 6.90780854165475 6.4151574184922 9.9923580908818 9.9533325300703 8.02732166452794 9.15918809435727 9.8797857416281 9.33062708643607 5.3242008411577 8.60071541664306 7.25694387608271 0.353064188003552 0.347788370577677 0.387779931228988 0.384543581917559 0.355929197801161 0.372616551399099 0.343807248773651 0.351854385478649 0.351125578951345 0.347462279553053 0.362620102054504 0.364891783848371 0.347893986512141 0.360588209983024 0.367326353611806 0.353667472002352 0.367092042331848 0.348560921549913 0.347344740510351 5 5 - 5336 5721 5468.636 5255 5890 - gene protein_coding_gene TRUE TRUE AT5G01015.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65295.1); similar to Os11g0463700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067867.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28368.1) -1.25638907026612 -10.4865523631980 6.39772857287001e-07 0.00297302446781270 10.9576045211770 11.2242537095499 -1.25638907026612 0.146009056246803 AT5G46230_at 6.76367116624603 7.15706290567061 8.73832574333472 8.92690154144225 6.34472909689226 6.67633331903099 3.33705203459912 3.56359796000568 3.15443185213909 2.35663690102748 4.60922794438910 3.77363034707702 3.3255915664629 4.41506502846704 3.75385261461026 3.76566942097896 4.05654870639041 4.66570768801354 2.19515087351337 0.246639617195945 0.250861504939350 0.249601478000113 0.238109438257958 0.246219987746529 0.254881750556589 0.242724331943959 0.251295853567182 0.252676811360186 0.247711052319564 0.238109438257958 0.254879211525946 0.240937044368781 0.242446831809028 0.246635518498077 0.238109438257958 0.254511252394421 0.242825796123102 0.257870228618964 5 5 - 18759850 18760126 18759978.818 18759667 18760272 - gene protein_coding_gene TRUE TRUE AT5G46230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09310.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC10818.1); similar to Os07g0119800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058773.1); similar to Os01g0210600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042369.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 1.06206256337105 10.4771883434520 6.45354985632317e-07 0.00299831926324775 10.9525326507249 9.74565999095702 1.06206256337105 0.102614602478845 AT5G26040_at 4.83722941040726 4.78730640212592 6.39434452933611 6.36703734126871 7.74889400212981 6.60059100100623 3.82837400151283 3.83819017281997 3.13433827776295 2.73230749162363 5.47506548915627 4.70755747439115 5.44732239956239 5.70301413996476 5.15504905894708 4.85572472653144 5.8794580377033 4.72307820910641 2.68180634397320 0.258071850142378 0.258164411332443 0.273484253127408 0.259521661440758 0.287929524454069 0.277322323880053 0.256125607851662 0.257877214276991 0.265226149099520 0.276976476937069 0.256125607851662 0.262037729578673 0.257540555249983 0.27338444286319 0.258429262840606 0.259878023265333 0.265550865068671 0.256415710267628 0.282763943435611 5 0|5 /|- 9100533 9101181 9100778.333 9099160 9101639 - gene protein_coding_gene TRUE TRUE AT5G26040.1|AT5G26040.2 HDA2 (histone deacetylase 2); histone deacetylase Class III RPD3 type protein similar to HDA9 (histone deacetylase 9), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G44680.1); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286)|similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to Os06g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057914.1); similar to hypothetical protein LOC431718 [Danio rerio] (GB:NP_001002171.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 1.52637179320271 10.4680314447918 6.5086484371073e-07 0.00302326719903634 10.9475656485418 9.59662972242933 1.52637179320271 0.198970282028893 AT5G46730_at 5.39740328695058 5.0845410782356 5.85698675493073 5.44460063587162 5.19833514500639 5.30180167830127 5.51879017534986 5.57869996394428 6.76007780700251 6.31709258009279 6.56619906429252 6.52134072892224 6.11169993353056 6.54186677986497 6.9411391225664 6.01815212194957 5.84269878000639 6.569926602195 6.21665529708321 0.198754087547177 0.207069384556666 0.200176352869275 0.201892995697579 0.203870938604117 0.209899346995745 0.205858869030953 0.201234357866294 0.202001505013261 0.208504694349362 0.198754087547177 0.204336204797434 0.200945547803609 0.204083897468790 0.207667778566769 0.204659883451337 0.205551504234777 0.19980191291142 0.200924093735155 5 5 + 18981476 18981932 18981698.636 18981239 18982295 + gene protein_coding_gene TRUE TRUE AT5G46730.1 glycine-rich protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to Eggshell protein [Medicago truncatula] (GB:ABE79200.1); contains InterPro domain Eggshell protein; (InterPro:IPR002952) -1.01605437889095 -10.4297747600182 6.74443553238168e-07 0.00313211586123805 10.9267354572585 11.8328463996865 -1.01605437889095 0.0919374102061016 AT5G67070_at 7.81409706889626 8.44984706563661 3.83890906716836 3.66616003702077 5.56301568295683 6.68191450540189 8.19452212116824 9.3219381261689 8.11282669329486 8.92804227676631 10.5306326788692 10.9570716649362 9.47396820974519 9.85318205838 10.8019701391253 9.5744572903172 7.91166187723275 10.2261264454660 9.14088691421257 0.236072828485299 0.232910479549689 0.323804707650271 0.288499989783974 0.264732947531691 0.259231966743382 0.229011918427541 0.235064285621649 0.279763992796562 0.233829323286203 0.232066314531278 0.240609348001579 0.232759692881355 0.238867211513002 0.244353481907788 0.22999169968234 0.254981987158586 0.229011918427541 0.233265224785745 5 5 + 26785388 26785709 26785562.091 26785246 26786072 + gene protein_coding_gene TRUE TRUE AT5G67070.1 RALFL34 (RALF-LIKE 34) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. similar to RALFL23 (RALF-LIKE 23) [Arabidopsis thaliana] (TAIR:AT3G16570.1); similar to Rapid ALkalinization Factor [Medicago truncatula] (GB:ABE93558.1); contains InterPro domain Rapid ALkalinization Factor; (InterPro:IPR008801) -2.07528714911462 -10.4059970061909 6.89564994910052e-07 0.00320165027136737 10.9137247085893 16.012993337769 -2.07528714911462 0.297584676557523 AT5G06690_at 8.84915603322854 8.69957872953527 9.14042656411755 8.93811321161258 9.8282260307056 9.50895957213715 7.04446698461003 6.73626362171877 6.83519593207715 6.96877469519652 9.53173858020628 8.8843483335617 9.19386364382246 9.36451844776598 9.20941335787506 8.82871999653747 9.1455323258544 8.67167092745297 6.88448876664609 0.145124370478666 0.143118464551933 0.148946045288472 0.140852594487630 0.147806308767218 0.155187135960789 0.145293852558006 0.164541696385559 0.157380412695435 0.154286513375915 0.148814303292199 0.148282155618640 0.145672792630364 0.146596308100985 0.144847711224517 0.144109267748748 0.149088212402309 0.142651348024594 0.150049745843701 5 5|0 -|/ 2060993 2061854 2061652.333 2060504 2061957 - gene protein_coding_gene TRUE TRUE AT5G06690.1|AT5G06690.2 (THIOREDOXIN-LIKE 5); thiol-disulfide exchange intermediate Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335)|Identical to Thioredoxin-like 5, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9FG36;GB:Q9SWQ2;GB:Q9XFI2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G04260.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.994740253845553 10.3477711705334 7.28171511356973e-07 0.00338017215571907 10.8816555465128 16.5930882599287 0.994740253845553 0.0882789898491215 AT5G24280_at 1.92486750047041 1.31295622129732 3.22495771606095 3.36371230347355 3.2347468865353 3.46385999538226 1.75056023834916 1.42568077468045 1.66080471194105 2.10623515811555 3.17134371462334 2.66406156255106 2.92292223965556 2.99852313881697 2.80006751113336 3.41592319903173 3.54982201161761 3.05059530385199 2.01149763193488 0.229040157820800 0.227869371184963 0.228351231024184 0.228710178361094 0.221867239312546 0.222185459752663 0.225985791441865 0.226354868798383 0.244479209599757 0.227820952256516 0.221007396829114 0.221077084003769 0.229661552299062 0.229557941806078 0.227196587680181 0.219410475983001 0.224156413731580 0.219035318971444 0.226746066780698 5 5|0 -|/ 8251442 8252174 8251889.6 8251381 8261431 - gene protein_coding_gene TRUE TRUE AT5G24280.1 ATP binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49250.1); similar to unnamed protein product; emb|CAB66404.1 gene_id:MOP9.10 similar to unknown protein-related [Medicago truncatula] (GB:ABE86966.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 1.15796839051085 10.3400700760020 7.33451058133247e-07 0.0034039463607964 10.8773916491844 4.96158595577653 1.15796839051085 0.128542195914947 AT5G23020_at 7.21148262117543 7.76241704368285 4.33557558870323 4.71139149349373 8.23959751253482 7.40795510170154 4.40523814649009 4.73415557822735 2.65391234857345 7.4353173182914 3.86675481804194 2.41447814737001 4.50139107714281 5.63993574037399 1.96692466916786 2.59098370619539 5.20032874777049 5.0017528875801 5.11203592023704 0.295224829986839 0.298493569921467 0.298491981570587 0.292875862195631 0.297998018858192 0.293871043252293 0.295273112571263 0.293546021961044 0.302954759269874 0.298263173543706 0.293192483485592 0.311510270702684 0.292875862195631 0.292875862195631 0.306505987885339 0.31014163407533 0.294137573809704 0.297783410329677 0.297673729400741 5 0|5 /|+ 7720566 7721613 7721246.875 7718124 7721842 + gene protein_coding_gene TRUE TRUE AT5G23020.1 MAM-L (METHYLTHIOALKYMALATE SYNTHASE-LIKE); 2-isopropylmalate synthase methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). similar to MAM1 (2-isopropylmalate synthase 3), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT5G23010.1); similar to methylthioalkylmalate synthase a [Boechera divaricarpa] (GB:CAJ55512.1); similar to methylthioalkylmalate synthase c [Boechera divaricarpa] (GB:CAJ55514.1); similar to methylthioalkylmalate synthase b [Boechera divaricarpa] (GB:CAJ55513.1); contains InterPro domain Pyruvate carboxyltransferase; (InterPro:IPR000891); contains InterPro domain Alpha-isopropylmalate/homocitrate synthase; (InterPro:IPR002034) -1.47446398595841 -10.3269594325493 7.42535048918556e-07 0.0034453626269821 10.8701205557454 10.5834302623708 -1.47446398595841 0.193061237106279 AT5G12080_at 2.75251203423401 3.40362498707277 3.26148924470956 3.66721614971743 3.5643065065916 3.546934064977 5.34028237517778 5.24757317584317 3.87994944120763 4.67957495178405 4.09145159134417 4.71376758881042 4.30548940963511 4.22879491510198 4.64718432694464 3.93775653723402 4.11501260273485 4.408310537147 4.80001044081888 0.231320411545834 0.225290192952850 0.230210929492838 0.245643489169613 0.233881342152882 0.230080021396890 0.238158398380952 0.227259901018511 0.236983279811546 0.228807913372653 0.231118148653281 0.224715189508879 0.228853957941543 0.230838323391383 0.229930745744962 0.224715189508879 0.253984921709219 0.236374961554848 0.233940148069045 5 5|0 -|/ 3898226 3898922 3898566.5 3898048 3901630 - gene protein_coding_gene TRUE TRUE AT5G12080.1|AT5G12080.2 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19520.1); similar to unknown [Zea mays] (GB:AAT08021.1); similar to putative protein T30F21.6 [Sorghum bicolor] (GB:AAL68849.1); similar to unknown [Zea mays] (GB:AAT08012.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain MscS Mechanosensitive ion channel; (InterPro:IPR006685) -1.17983609913527 -10.3243805935677 7.44336193512937e-07 0.00345297560170652 10.8686885532005 8.22756692556835 -1.17983609913527 0.133763441263487 AT5G14940_at 8.46104936010727 9.20077895214395 10.4406553296486 10.4418129298335 10.4969018999507 10.1194960822387 8.80273502977571 8.88445801459866 6.00556405046743 6.68771959207905 8.43003444965884 8.08864615427455 8.65340647432832 8.43276672116881 8.05667771075602 8.39291765774768 8.84277953940314 8.41485523302809 4.61423802193454 0.187299677399167 0.174464693537484 0.178968803257065 0.180158543151119 0.176382742581689 0.181362263430462 0.175756997922029 0.178508252867969 0.222087178767092 0.192615090211593 0.175925409173050 0.175412586903707 0.174464693537484 0.187941209482767 0.182632872838444 0.179005942388852 0.189297701266816 0.181054610214991 0.204927122082363 5 5 - 4831835 4832323 4832107.909 4831751 4834398 - gene protein_coding_gene TRUE TRUE AT5G14940.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G01350.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE79897.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.22914588850217 10.3226303263332 7.45561339569708e-07 0.00345791349292431 10.8677163119952 16.6975781401402 1.22914588850217 0.144406314956513 AT5G47070_at 8.5099640139111 8.46931429062973 9.91202956508257 9.92660413117845 9.5459673272135 9.26072771248245 6.1888374057176 6.32414248713141 8.25573620688814 6.47361444685537 8.45048518170418 8.29668701984693 7.83678023474516 8.72591050250963 8.08557129992224 8.42383428237618 8.3082782454439 8.71352260971471 6.46546968615253 0.156421074128078 0.150740427397906 0.152947781746408 0.152125457473072 0.150175738234621 0.150175738234621 0.179101198200331 0.159884936101185 0.157171157337787 0.170308787916217 0.155135549218823 0.151681694533562 0.159565353330609 0.156624381163567 0.158093504482978 0.150175738234621 0.152240848979164 0.156139888271583 0.172186670134847 5 5|0 -|/ 19135991 19136501 19136254.1 19135770 19138136 - gene protein_coding_gene TRUE TRUE AT5G47070.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G17660.1); similar to protein kinase, putative [Brassica oleracea] (GB:ABD65030.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.890361452246332 10.3192452711821 7.47937017147313e-07 0.00346818394851209 10.8658352051035 16.2272352593341 0.890361452246332 0.0551428091449607 AT5G11430_at 4.82779176109186 4.65296598542435 4.86470117140436 4.93434509423518 4.6851332388061 4.83684519531339 4.60376434704946 4.8338021343867 5.72818819609791 5.334080321128 5.58852602499164 5.4663751310563 5.41453586180731 5.57568490082 4.78307648545135 5.28340896151524 5.19978325169654 5.03734078678674 4.88739327244641 0.208618514715268 0.181476023034854 0.18992586067137 0.189239097150304 0.182981308538421 0.183879525906013 0.189634443573228 0.187138862584442 0.192706883831621 0.191468237102762 0.188608150574457 0.184836504857686 0.182118617555375 0.181600527467778 0.195150577241262 0.184569087612961 0.183032546525365 0.185851735280126 0.185622867085286 5 5 + 3651681 3652211 3651940 3648476 3652405 + gene protein_coding_gene TRUE TRUE AT5G11430.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G25520.2); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921) -0.894258213406114 -10.2879167993837 7.70318039698705e-07 0.00357119443204320 10.8483773319258 10.0849912936671 -0.894258213406114 0.0577464067135155 AT5G07620_at 2.27610012185094 2.20379054487624 2.0830407050152 1.88701711192591 3.62804614534836 3.31650969526017 2.13677776624364 1.76360860363986 0.819599889881998 0.656616569910861 2.95706123933193 2.34288421016729 2.56672655971225 2.78665360763661 2.1158677051463 2.11478628425171 1.26838646120100 2.39695969793804 0.438118493836122 0.206196890751264 0.197756511142479 0.204709841161756 0.202232165284444 0.211152713716956 0.208953933259529 0.204235329477728 0.199474526123222 0.202970388558740 0.21516497996223 0.197604590426379 0.197604590426379 0.201096217268119 0.202091357597296 0.199619901401964 0.200009692275781 0.202117141790495 0.208997352684803 0.209158309160837 5 5 - 2407444 2407900 2407679.636 2407402 2409067 - gene protein_coding_gene TRUE TRUE AT5G07620.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61570.2); similar to protein kinase [Capsella rubella] (GB:AAR15469.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.996862376261774 10.2466861657148 8.00888570252734e-07 0.00371211852312142 10.8252678456601 3.89025002271144 0.996862376261774 0.0915660513766796 AT5G52280_at 3.86043943817014 4.08590011216611 3.72721721731723 3.54617248790654 4.43031987742104 4.28851569679053 4.94756896441039 4.95389581788150 5.49189420502687 5.69525245644866 7.18830849384914 7.21166923599003 6.07170299504586 6.4353911509003 6.48054965122138 5.637451483635 4.90782206510213 6.2373070073571 5.89704410623874 0.237537282459361 0.231783153757206 0.247088572619412 0.246031935923376 0.231862127310917 0.244881971159114 0.229375731714818 0.228875966387653 0.229871218737244 0.230621679719690 0.229661780817034 0.229965563628348 0.228524389257380 0.2335539567747 0.230803773959005 0.230180188010068 0.238029153523632 0.233050534953170 0.232031767198787 5 5|0 +|/ 21246650 21247296 21246921.7 21244059 21247473 + gene protein_coding_gene TRUE TRUE AT5G52280.1 protein transport protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63300.1); similar to putative myosin [Oryza sativa (japonica cultivar-group)] (GB:AAO72668.1); similar to Os10g0504600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065004.1); contains InterPro domain t-snare; (InterPro:IPR010989) -0.884865518142592 -10.2382463151511 8.07307332639012e-07 0.00374106217944918 10.8205185543349 10.2130064596541 -0.884865518142592 0.0557435274942364 AT5G57800_at 8.97741549236621 9.16006161491427 10.7252633214167 10.8450998761887 11.5820428128403 11.4235176567024 10.1550903377825 10.0266771643202 9.9784628439843 9.80652875214927 12.0177529079560 11.0180083571001 11.4280793989005 11.5150596771064 10.8300894746058 11.0166750876330 10.8941887572956 11.2034248821294 9.65046086255844 0.120176279091326 0.112661982046769 0.116256852201359 0.113497771241600 0.117479677589622 0.121278106217019 0.112580759747464 0.115486431787288 0.120215524412844 0.120760964071398 0.117763388010789 0.117088539232598 0.112580759747464 0.117401886666755 0.112791433688619 0.115973730603916 0.129410811366031 0.118732383893515 0.118453378166735 5 5|0 +|/ 23440255 23441029 23440638.7 23437435 23441278 + gene protein_coding_gene TRUE TRUE AT5G57800.1 WAX2; catalytic encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. similar to CER1 (ECERIFERUM 1) [Arabidopsis thaliana] (TAIR:AT1G02205.2); similar to lipid transfer protein (GB:AAA33934.1); similar to glossy1 protein [Zea mays] (GB:AAR90847.1); similar to Gl1 protein [Zea mays] (GB:AAR97643.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain SUR2-type hydroxylase/desaturase, catalytic region; (InterPro:IPR006087); contains InterPro domain Sterol desaturase; (InterPro:IPR006088); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.869795826016888 10.1756785360067 8.56670830995764e-07 0.00396895596000338 10.7851095461504 20.8880096866022 0.869795826016888 0.0517258549543107 AT5G66320_at 5.86414951209258 5.94943786279547 6.7622322745188 7.29079261931309 6.76125142054579 7.04218002439072 3.18624916530518 3.582073580692 3.71764568430813 3.26882976292002 5.25220677314023 6.27095794286428 4.97124526625610 5.5172976785493 5.56676712097437 5.21827719833104 5.11728406352343 4.22417712105531 3.3959872861292 0.255242068132553 0.247312811019881 0.260314946932023 0.247062676344324 0.246477215961402 0.258292880338710 0.247997037079026 0.244170427594496 0.250551600953557 0.247016928481253 0.242934573270993 0.245434069873628 0.249606678943643 0.248709362613725 0.245990958201652 0.243543884750489 0.257365404345139 0.248730906634326 0.251706919553836 5 5 - 26513454 26513996 26513730.273 26513181 26515075 - gene protein_coding_gene TRUE TRUE AT5G66320.1|AT5G66320.2 zinc finger (GATA type) family protein Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. Identical to GATA transcription factor 14 [Arabidopsis Thaliana] (GB:Q9FH57); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G51080.1); similar to hypothetical protein [Thellun (GB:ABB45844.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 1.12409513883240 10.1738874334589 8.5813135204482e-07 0.00397486442267161 10.7840906758195 10.1688445858096 1.12409513883240 0.125060942175314 AT5G03170_at 2.19063515237985 2.18587419679134 4.26365328918458 4.26203246160641 3.37948693296734 3.53695679291208 2.76272176296206 2.52597015064111 3.29250964854225 2.79000842238618 4.11572732321619 4.54128278430809 4.2251298508468 3.87671061919775 5.26115176022959 4.34408644021558 6.5824495616244 4.27811415479342 3.40333970128762 0.256205819216835 0.245050349513684 0.243535963131721 0.245192313739394 0.241369367616927 0.251685702397827 0.242923070448504 0.244583127185823 0.24865795769056 0.253440502620735 0.251262862660525 0.245633131251407 0.245313176692228 0.244271506033332 0.251422849077465 0.245559817942379 0.257343898146721 0.241595099848118 0.250215516391325 5 5 - 753011 753452 753249 752749 753656 - gene protein_coding_gene TRUE TRUE AT5G03170.1 FLA11 (fasciclin-like arabinogalactan-protein 11) Identical to Fasciclin-like arabinogalactan protein 11 precursor (FLA11) [Arabidopsis Thaliana] (GB:Q8LEJ6;GB:Q9LYW8); similar to FLA12 (fasciclin-like arabinogalactan-protein 12) [Arabidopsis thaliana] (TAIR:AT5G60490.1); similar to fasciclin-like AGP 13 [Populus alba x Populus tremula] (GB:AAT37956.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) 0.863575847414309 10.1698464956457 8.61436399668382e-07 0.00398931196686428 10.7817909108022 7.04593341870193 0.863575847414309 0.0492137088645606 AT5G23660_at 8.50670596522994 8.80559662080488 9.86177907016534 9.56709969126786 10.1315390294118 9.59703248288594 3.93824640696829 3.99850660774579 2.5666607173508 2.60110251849429 2.35614151915395 2.96929819620556 3.96064068553782 3.31972862292314 3.00491104751657 3.60698407690554 4.75020824723267 2.54904222592188 2.75285105975272 0.366836010266070 0.37120534124756 0.367514204106103 0.376401278569965 0.377486241635568 0.366042644679923 0.341309861572397 0.343566743785449 0.341371107595358 0.342485688187587 0.347484904929828 0.335520295889046 0.343528919322484 0.33513863302126 0.338478151009697 0.335832588993792 0.34379400681101 0.33513863302126 0.339325857309703 5 5|0 -|/ 7972010 7973198 7972571 7971654 7973928 - gene protein_coding_gene TRUE TRUE AT5G23660.1 MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) homolog of the Medicago nodulin MTN3 similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G48740.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); similar to Os11g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067955.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 1.09072840751963 10.1423918527959 8.84260586767364e-07 0.00409412651673289 10.7661265374251 11.0282252807469 1.09072840751963 0.118070988034856 AT5G09760_at 6.8340066500148 7.22657138167659 6.73909795356797 6.99759405654807 6.24281221378487 6.65563415079783 8.72859670885057 9.1945937017771 8.15518782085605 8.83220248869265 9.7096725140043 10.0371660100041 9.11858752308403 9.3347182491199 9.3233679998525 9.45850332614358 8.88364712688597 9.5771237764007 8.9256544262314 0.197861468071801 0.192361655758136 0.193483411225986 0.186864846788272 0.194000635562846 0.199823987508484 0.196402322738804 0.190965601759564 0.207005635078474 0.187361173836811 0.184169051192374 0.188287282802552 0.183316081001245 0.188089001960504 0.187088064948592 0.187890103518691 0.194517457146595 0.186624035002336 0.187284464121148 5 5 + 3033832 3034339 3034112.182 3032376 3034544 + gene protein_coding_gene TRUE TRUE AT5G09760.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G64640.1); similar to 52O08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67549.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -1.16030929541837 -10.1052496277593 9.16189646449137e-07 0.00424104187341306 10.7448248760136 16.3613782992674 -1.16030929541837 0.134994002647527 AT5G47180_at 6.88364734788348 6.99057254883378 8.38271158533857 8.54883107894103 8.93920857520468 8.63493178035286 5.63540976750928 5.69352937099053 5.40834286239798 5.00268526569944 6.54437229742373 5.70733340991479 7.1948669349327 6.6620121768258 6.93159193247077 6.1833966298132 7.06172406794683 6.54745082436212 4.74625664558708 0.237576000588195 0.237576000588195 0.239501439057323 0.242731013504188 0.239809382903559 0.242950800701065 0.238116476180917 0.237576000588195 0.248016300220025 0.239227068270413 0.237576000588195 0.237576000588195 0.237576000588195 0.242060099882802 0.237576000588195 0.240183982556441 0.247813067125097 0.237830896128959 0.239280636482737 5 5|0 -|/ 19178642 19179838 19179397.375 19178371 19181024 - gene protein_coding_gene TRUE TRUE AT5G47180.1|AT5G47180.2 vesicle-associated membrane family protein / VAMP family protein similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1), protein binding [Arabidopsis thaliana] (TAIR:AT3G60600.1); similar to vesicle-associated membrane protein, putative [Brassica oleracea] (GB:ABD65040.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) 0.893758766745466 10.1047393985599 9.16636884421245e-07 0.00424219550110152 10.7445313672125 13.2918661529348 0.893758766745466 0.0635822101710778 AT5G52870_at 3.04529930165431 3.48624190729825 5.18521699745665 5.88958546430407 4.8508436880013 5.18214875635549 2.67066311476329 2.78730262814218 2.33378505893152 2.43497379598569 3.55226899005788 4.01267642733354 3.79191937006980 3.466649241072 4.5941585376978 4.09355792867286 4.61995955949788 3.86225130685608 2.58404107671605 0.218648061790957 0.209465377793434 0.215184649889552 0.211145663720136 0.215587896793314 0.213953922054829 0.214570700689912 0.213305698235265 0.217041929691852 0.226975814394815 0.214442709201358 0.214531823044580 0.209009204532665 0.218130115767069 0.217031806989967 0.211841661223091 0.229228481031725 0.213235600684210 0.210584307331543 5 5 - 21445614 21446178 21445891.273 21445173 21446671 - gene protein_coding_gene TRUE TRUE AT5G52870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64080.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83069.1) 1.25782258097505 10.0998221494333 9.20959235947872e-07 0.0042612783847308 10.7417014934884 7.36221947259776 1.25782258097505 0.156126877691155 AT5G02610_at 7.65020957466085 7.7161664558421 7.89508257205118 7.8798559662666 8.16771245469754 7.88198210752117 8.01840990960674 8.25348088680237 7.97590681260848 7.85616796321506 8.03076370633253 8.06031464739237 7.81937087714283 7.78116950865398 8.14959914512637 7.59668943982727 7.80717858902365 8.03904549047546 7.8140692574696 0.116888228137199 0.114500211616060 0.116013268281419 0.119358442796407 0.112369258587673 0.118813545382191 0.11945465557395 0.121806545858316 0.115733457801508 0.113297152969559 0.118734182803695 0.116095936077894 0.116067733358162 0.112613904843863 0.119559139561655 0.116948611117534 0.126388787047329 0.115330438121211 0.113613715204415 5 5|0 +|/ 587756 588504 588182.625 587523 588731 + gene protein_coding_gene TRUE TRUE AT5G02610.1 60S ribosomal protein L35 (RPL35D) Identical to 60S ribosomal protein L35-4 (RPL35D) [Arabidopsis Thaliana] (GB:Q9LZ41); similar to 60S ribosomal protein L35 (RPL35B) [Arabidopsis thaliana] (TAIR:AT2G39390.1); similar to 60S ribosomal protein L35 (RPL35A) [Arabidopsis thaliana] (TAIR:AT3G09500.1); similar to 60S ribosomal protein L35 (GB:Q9M5L0); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) -0.892321991006885 -10.0414405245716 9.74003757979649e-07 0.00450574138441386 10.7079317383476 15.8291447092283 -0.892321991006885 0.0650930241025154 AT5G48560_at 3.20400451324216 3.14586509411727 6.18886110291357 6.53701144314869 5.36533348165441 4.75129423690182 2.6798605263097 3.25407126094534 4.00232647175881 3.2323174173293 5.40709908992045 4.18023601398756 5.62970576164713 5.66060661330094 3.97416192080106 5.38074116421055 5.50191714078762 5.90080943019625 3.76915865867982 0.248240329310585 0.248491352945376 0.270352842292046 0.258755061003498 0.259316313134386 0.261929069519975 0.260271533398813 0.256068561295383 0.262867730031459 0.256277045046936 0.269585146896697 0.246760629100207 0.250344497905332 0.263663429154960 0.246926363029405 0.247210862397209 0.249158961975691 0.247359916330843 0.246760629100207 5 5 + 19702460 19704043 19703599.909 19701232 19704377 + gene protein_coding_gene TRUE TRUE AT5G48560.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G07340.1); similar to Os01g0915600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045188.1); similar to TA1 protein [Oryza sativa (japonica cultivar-group)] (GB:CAE00874.1); similar to Os11g0442500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067817.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 1.25782742766930 10.0362610043123 9.78867531062812e-07 0.0045272623311655 10.7049204308046 8.826959619627 1.25782742766930 0.157788563805905 AT5G02370_at 1.30023206532251 1.07830314948479 1.89245832895818 1.71987073801805 2.02725306272031 2.17351051924711 1.00745653137528 0.699653832869169 0.920104655711841 1.18629697533456 1.77640436049812 2.40488308003474 2.03242958706152 2.20336366348429 2.32786471239915 2.48949157720221 2.18340609253849 2.48691845211516 1.17548412711512 0.210629416153490 0.205631297868086 0.213817455264051 0.209003999087184 0.209847828737917 0.211398122056349 0.213280217072631 0.211103605055158 0.217279667195616 0.217671880493195 0.205631297868086 0.209561344564969 0.212826605177995 0.206532073369158 0.205631297868086 0.213702553949073 0.223309876203808 0.210569130790833 0.213067260247994 5 0|5 /|+ 505230 506360 505738 503406 507242 + gene protein_coding_gene TRUE TRUE AT5G02370.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G49650.1); similar to Kinesin, motor re (GB:ABE78033.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain DNA polymerase beta, N-terminal-like; (InterPro:IPR010996) 0.92539766073611 10.0345980640262 9.804346837605e-07 0.00453352997770855 10.7039530870959 3.15337083352637 0.92539766073611 0.0764526958837445 AT5G04170_at 7.97429662090103 7.85627570083548 8.8875597002523 8.6755295768276 9.14298357429458 8.7160845478827 6.49501229720266 6.4320175488918 6.53334487904482 6.08202856505915 8.33909316654394 8.31357347742474 8.5289713859712 8.45465789219035 8.44793762594145 8.18192183803792 8.31410428983884 7.9706361848189 5.82834303864459 0.169883318544439 0.165068942429289 0.163977220927173 0.164086670001224 0.167870802438271 0.175532047954161 0.169206782854505 0.172268959974602 0.176965455617174 0.169283123112166 0.164848637127990 0.163977220927173 0.172658178238351 0.169643261894627 0.164113415716933 0.164536033782689 0.163977220927173 0.164690925322065 0.167677366648826 5 5|0 +|/ 1145950 1146864 1146192.9 1145432 1147782 + gene protein_coding_gene TRUE TRUE AT5G04170.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G10300.3); similar to Os11g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065711.1); similar to Os12g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066106.1); similar to putative cysteine protease [Pisum sativum] (GB:CAB63845.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.952666052347555 10.0032243226527 1.01051749275449e-06 0.00467162236900399 10.6856542633864 15.2558536843087 0.952666052347555 0.0856746133727944 AT5G47380_at 2.33622311929186 1.91614352635722 1.56034997152083 1.83081564358918 1.94754553920261 1.72914402608696 3.42375701712587 3.21282525397744 3.80323803338163 3.46362672560174 3.67187071381973 4.45178575726723 2.65728336750323 2.97649022132089 4.13834110868569 3.49434325208365 2.5561004254501 3.29476312836515 3.74914534244693 0.257130201747074 0.243342022220733 0.257734119753371 0.254582027796208 0.252297321213797 0.250689706424848 0.243342022220733 0.247800421804743 0.243342022220733 0.245714935082184 0.243342022220733 0.252771018163007 0.243342022220733 0.243342022220733 0.257540930793235 0.243967601652326 0.256569197304442 0.248108499185333 0.261446053944172 5 5|0 -|/ 19238862 19239535 19239241.1 19238699 19241818 - gene protein_coding_gene TRUE TRUE AT5G47380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66600.1); similar to hypothetical protein 24.t00022 [Brassica oleracea] (GB:ABD64944.1); contains InterPro domain Protein of unknown function DUF547; (InterPro:IPR006869) -1.00850307637161 -10.0029341508330 1.01080035873169e-06 0.00467191925805786 10.6854845890213 5.78316331912169 -1.00850307637161 0.101175573194849 AT5G23870_at 6.46438134006174 6.32802634984668 7.39201708315003 7.38570452517857 9.2036170814985 8.45313435995349 6.49395616266083 6.02742993970726 6.76221025253645 5.55673325331307 9.43857665805474 8.23444426813334 8.74554312942367 9.04277475928632 8.16624190713758 8.7285315120457 8.70200218535676 8.66358793971253 5.70261928692996 0.246404413682714 0.240693608251990 0.240186995021317 0.250748276236462 0.231678273670189 0.242019576912972 0.231898276955947 0.239978920708955 0.256360141509673 0.246760361786418 0.228660183336665 0.226647242037921 0.231447472635239 0.231987166778994 0.228826983292716 0.226647242037921 0.239506712175738 0.226647242037921 0.238350001289331 5 5|0 -|/ 8046333 8047278 8046811.25 8045847 8050178 - gene protein_coding_gene TRUE TRUE AT5G23870.1|AT5G23870.2|AT5G23870.3 pectinacetylesterase family protein similar to pectinacetylesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62060.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34281.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 1.23629996427671 9.97970071661671 1.03373020950892e-06 0.0047768672981407 10.6718734156332 14.5797335515006 1.23629996427671 0.154736763902295 AT5G23240_at 10.3263487363755 10.4141743821381 10.7481024499747 10.8518541016728 11.1075902997239 10.4566499289415 6.79094818540484 6.57607253410931 4.6027027151582 6.32034968833217 6.17458125666081 5.01555381725047 6.81466358449345 7.84384948232082 5.66891590441852 6.41779564042635 8.09237558291799 6.78609786368732 3.40641268998929 0.281688193575402 0.282953333443173 0.284156946991344 0.285790502715331 0.284038656652333 0.283677108993057 0.28055737012449 0.280259470188631 0.293208042103726 0.276276833281342 0.275647942466613 0.282746646791553 0.279590113994139 0.290047318599971 0.277381228808679 0.281008649799713 0.280842290272736 0.281212338300946 0.28545882390339 5 5 - 7826897 7827432 7827131.364 7826735 7828727 - gene protein_coding_gene TRUE TRUE AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42750.1); similar to H0103C06.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86103.1); similar to Os04g0675400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054247.1); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 1.08442926854517 9.97278697740443 1.04066215502937e-06 0.00480785915623568 10.6678132180431 15.3480763303002 1.08442926854517 0.1209369412439 AT5G26200_at 4.59421610653292 4.45394362173026 5.45357609016159 5.31989611418244 5.6171632023898 5.51412709518463 6.1306908326863 6.01546983363057 6.00923144206972 5.80353898415033 5.38530277153545 6.12174406657682 5.53191919527446 6.15529674540184 6.17429812521718 6.43343043361042 6.15606332019884 5.97852744233405 5.69640245112795 0.214459682014856 0.199497362367731 0.199528958163693 0.193495974930502 0.203519850328758 0.198838149335861 0.194328136634353 0.190205479764649 0.198755959735034 0.191572168080706 0.191876339178260 0.195132728331732 0.198674550662878 0.194973243318400 0.191011959306217 0.193153596631319 0.194026994294433 0.195678282477524 0.194184453233863 5 5 + 9157703 9158257 9158020.273 9157145 9158407 + gene protein_coding_gene TRUE TRUE AT5G26200.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to mitochondrial carrier, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94258.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.831514947599578 -9.94519426400453 1.06883428760592e-06 0.00493694557445176 10.6515639518265 11.3016172228796 -0.831514947599578 0.0428948804671502 AT5G43745_at 4.72982992571118 4.71702152899313 4.47628649680701 4.62637921045188 4.55065157193942 4.19754289368118 5.89369093814541 5.54551801906978 5.60617795628127 5.6654587661308 6.57188958239245 7.31137600239707 5.79837059452857 6.20772822302949 6.80862328365277 6.50131489571109 5.60987091049964 6.65438185368427 5.64575880807608 0.223759442787353 0.218347606818629 0.217621834364279 0.222241327879822 0.221772232236723 0.223379029570485 0.219152958582635 0.217533367395964 0.217680321469232 0.221899072816812 0.230626270040567 0.220892730586163 0.238965277049928 0.231755335931211 0.218609308841180 0.214169674775156 0.221931989973654 0.21873076847416 0.219495828539972 5 5|0 -|/ 17586663 17587686 17587256.1 17586374 17592198 - gene protein_coding_gene TRUE TRUE AT5G43745.1 phosphotransferase-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to Os03g0163100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049055.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN06856.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) -0.960192453432136 -9.93752129717185 1.07681470884411e-06 0.0049727303254421 10.6470325351276 10.8781532039664 -0.960192453432136 0.089688740939135 AT5G07700_at 2.53799718502296 2.77192905529022 2.97211967253084 3.10584248139929 4.21031511476319 4.2904631956453 2.44020934377664 2.71969032680905 1.33704170176973 2.88699653676816 3.81552526519749 3.73222867247185 3.80925879956624 3.81571064939477 3.02799640250855 3.47511018969767 4.36404374929476 4.61786327969188 2.27387456811352 0.206896403309038 0.200939410571036 0.207042373730925 0.203180149928671 0.212786473901345 0.210284615049087 0.211727710352839 0.203230235038547 0.213844862451834 0.200939410571036 0.203736321881413 0.205186071654694 0.206853762367077 0.210442138977730 0.205448202881364 0.200939410571036 0.223079218090317 0.218214189448398 0.212645786709937 5 5 + 2451017 2451441 2451249.636 2450326 2451579 + gene protein_coding_gene TRUE TRUE AT5G07700.1 MYB76 (myb domain protein 76); DNA binding / transcription factor Encodes a putative transcription factor (MYB76). similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to Os04g0461000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052993.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.892074057557724 9.9278432632584 1.08697290072907e-06 0.00501855388266611 10.6413090047489 6.13016482766887 0.892074057557724 0.0686002404725221 AT5G45920_at 6.6866585106105 6.87458361964671 6.36673492216408 6.35287389794848 7.4042020513764 6.84990980229931 8.24848332932133 7.49465550445761 5.55822005624562 6.34751971533197 5.97976648180821 6.30222237388927 6.4359912921515 6.0444333275343 5.98091152605002 6.28047366886286 6.69537203725911 6.16290876732455 6.43967075524824 0.242351276989751 0.233257014307955 0.243985457423464 0.236611186505948 0.234990610286423 0.245706442787254 0.237914582839576 0.235700183078136 0.243659079070787 0.236529473886108 0.230317011099116 0.225718216464417 0.239287347188646 0.239149663095234 0.233074951976908 0.225965871457244 0.235824413456667 0.23488672893246 0.230073890614827 5 5|0 +|/ 18640452 18641826 18640944.111 18639986 18642012 + gene protein_coding_gene TRUE TRUE AT5G45920.1 carboxylic ester hydrolase similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G62930.1); similar to putative CPRD49 [Oryza sativa (japonica cultivar-group)] (GB:BAD69418.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -1.27679136323794 -9.90714408388992 1.10904989237666e-06 0.00511937430321066 10.6290376754305 13.2099610930457 -1.27679136323794 0.165174694511924 AT5G57110_at 6.4051095146937 6.4693355696715 5.21141804951639 5.05572103489911 6.87707764668134 6.25581446341497 2.25649722774966 2.02769769069236 1.76859689526669 2.47374216865792 4.14923790465054 4.88337275573238 3.83582775073612 4.09692385633231 4.75841456972855 4.32884616418009 3.9608451847346 3.79533888271499 2.12744349142637 0.295219570099093 0.298021831123011 0.282443104988998 0.283289418367028 0.297466037834105 0.290141318327257 0.288068310342601 0.291963815268555 0.297580790280004 0.311086971690727 0.280756559934273 0.280756559934273 0.284849130769048 0.280756559934273 0.280756559934273 0.280756559934273 0.293442489465348 0.293010725548677 0.290630255372133 5 5|0 -|/ 23127205 23128147 23127652.333 23126665 23134789 - gene protein_coding_gene TRUE TRUE AT5G57110.1|AT5G57110.2 ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding|ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calmodulin binding Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. Identical to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8) (ACA8) [Arabidopsis Thaliana] (GB:Q9LF79;GB:Q9LU75); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) [Arabidopsis thaliana] (TAIR:AT3G63380.1); similar to ACA9 (autoinhibited Ca2+ -ATPase 9), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G21180.1); similar to putative plasma membrane calcium-transporting ATPase [Physcomitrella patens] (GB:CAD21958.1); similar to putative calcium-transporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD27978.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain ATPase, P-type cation-transporter, C-terminal; (InterPro:IPR006068); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014) 1.06148477612217 9.86474974002366 1.15580053974353e-06 0.00533401949091638 10.6037765496441 8.2445147673573 1.06148477612217 0.118221001021552 AT5G42900_at 4.35730907573537 4.39127577864232 3.8846116990594 3.88623565970656 6.36754931839915 6.74290442251463 1.16509810962189 1.63239713212691 1.48160278469858 1.23413508878212 1.53848003296348 1.60456642389426 1.88140601675451 1.80379643443452 1.69459096560014 2.02882861648785 1.94914277145108 2.01189966156826 1.44482805544015 0.257621258113020 0.242176185101753 0.243132902228331 0.232524303218297 0.254047284042318 0.244590915291114 0.234281463718877 0.232555079680942 0.236941482042772 0.228753020736242 0.237535928161975 0.228592793365243 0.241350719705427 0.23257881638123 0.233004390160139 0.231379328621131 0.229858787834767 0.239818355290152 0.234466796758851 5 5|0 -|/ 17215623 17216381 17216069.3 17214869 17217021 - gene protein_coding_gene TRUE TRUE AT5G42900.1|AT5G42900.2|AT5G42900.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein MtrDRAFT_AC151424g24v1 [Medicago truncatula] (GB:ABE88920.1) 1.00476359905372 9.86415764226306 1.15646843626855e-06 0.0053359453649431 10.6034225191430 5.65389473699305 1.00476359905372 0.103892802762728 AT5G65020_at 8.39092947003737 8.49774997892673 6.89790935195262 7.05405246912196 8.2744481856145 8.08735263113116 8.50313809861275 8.58828257021063 7.62384505289343 8.38693224286714 8.98379220788428 9.72441909924725 8.66838226796385 8.7266076454091 9.75225937042888 8.8510640289304 8.33973654497906 9.10521113316539 8.07243670539588 0.131580652588555 0.127693657764966 0.154856215339380 0.153885760822690 0.129211859584047 0.136727598759814 0.134466951534318 0.128558751510613 0.152320547409957 0.135307533813719 0.136487354776494 0.130940949078694 0.145224944952302 0.138416743243124 0.134299992868477 0.133330842297550 0.133966180142186 0.129022354010063 0.131759537173584 5 5 + 25992053 25992755 25992492.364 25991041 25992952 + gene protein_coding_gene TRUE TRUE AT5G65020.1 ANNAT2 (ANNEXIN ARABIDOPSIS 2); calcium ion binding / calcium-dependent phospholipid binding Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides. similar to ANN7 (ANN7, ANNEXIN ARABIDOPSIS 7), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10230.1); similar to 80C09_22 [Brassica rapa subsp. pekinensis] (GB:AAZ41833.1); contains InterPro domain Annexin; (InterPro:IPR001464); contains InterPro domain Annexin, type plant; (InterPro:IPR009118) -0.835059026974612 -9.85592406453996 1.16579959275963e-06 0.00537783352140016 10.5984959494733 16.5600688632692 -0.835059026974612 0.0483456696630092 AT5G24530_at 11.2162698295896 11.3898427974131 12.4457571860851 12.4343070307261 12.0190597779844 11.7318048180434 5.77526018637826 6.07333308893632 10.9710900170588 6.98877556707921 8.04151777231186 8.97499591242936 8.7749617818221 8.88091401558218 7.6663149120523 9.35424537355855 8.18664462694043 8.73539043170927 8.68003190010403 0.240681807686677 0.239726316555933 0.240102577708059 0.239726316555933 0.240798767270298 0.24052630008553 0.272016576248225 0.260669450081871 0.244333261992307 0.250172683506601 0.248989707999346 0.239726316555933 0.240652391441181 0.246359074669979 0.239726316555933 0.242584643989465 0.248033029930509 0.249632513658657 0.239726316555933 5 5 + 8382060 8383019 8382371.273 8378836 8383404 + gene protein_coding_gene TRUE TRUE AT5G24530.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G10490.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE85154.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.910390372918302 9.82976233265746 1.19599520023315e-06 0.00551592986347529 10.5827986005234 19.1141238050853 0.910390372918302 0.0777055038700096 AT5G56630_at 8.8390652069326 9.02388613297981 9.82139034358323 9.8493559853216 9.53215083159418 9.45738099233743 7.84308910681759 8.00567253464334 6.17772282389195 7.34929904110317 8.78646940380747 9.04584856420968 8.88037345009569 8.65786175515288 8.79898357100569 8.78672037735029 8.7083178973834 9.00343934172774 6.63339267600004 0.166446696957041 0.160989302575337 0.156677758194755 0.158153777061430 0.156677758194755 0.15903634833588 0.162423407202753 0.162075578338712 0.192149626691081 0.173814598720869 0.161656192804808 0.157527564705051 0.156677758194755 0.167583369544865 0.159424111571016 0.159456958284422 0.167572119665357 0.169739779507158 0.182189193888119 5 5 + 22943291 22943908 22943606.909 22941148 22944189 + gene protein_coding_gene TRUE TRUE AT5G56630.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE84859.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.822160612375344 9.7896065673556 1.24400629708314e-06 0.00573611303585034 10.5585755049433 16.8233188794879 0.822160612375344 0.0447823045764877 AT5G64510_at 5.43852275975485 6.03244682058580 8.39060698410926 8.57861689932512 6.41528313050258 6.5620167044792 2.98662810281579 2.5841165706955 2.39279235169423 2.12377198463689 2.43962217841342 2.75395431569790 3.22343414278038 2.50242085795516 2.88086778652756 3.20932253620051 3.64157888809133 3.07994099610745 2.62862313360816 0.264065805523802 0.265134493078412 0.272154339726501 0.264844401753414 0.265328361392804 0.283838794062859 0.257387347289596 0.263943484206096 0.261827997598419 0.263935305902715 0.274105897097887 0.267710542911190 0.26111219203921 0.264260108404742 0.262692367669633 0.261479097800724 0.266972583584230 0.263207875060498 0.261062980573567 5 5 + 25802921 25803337 25803117.909 25801630 25803533 + gene protein_coding_gene TRUE TRUE AT5G64510.1 similar to ORF; able to induce HR-like lesions [Nicotiana tabacum] (GB:AAC49976.1); similar to Os01g0767600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044361.1) 1.10296116113209 9.7615409954857 1.27880218066925e-06 0.00589527805288526 10.5415521682750 8.54759068121758 1.10296116113209 0.130841204894884 AT5G43880_at 6.61928746799119 6.67384764769741 5.71523221500403 5.78082230241158 7.11496820712057 7.07859601754533 7.53821739904626 7.87450300829809 7.30827045122507 7.70540601020628 9.0034180021009 8.8089851347664 8.40148168218677 8.82293124024877 8.66068719623151 8.74613178299556 7.52167874474746 8.58011425264746 7.60360767824523 0.207213570865222 0.201174375160291 0.231325049808323 0.214903573662654 0.205379789308074 0.211045382980574 0.202964044426876 0.201292769780816 0.222336075522274 0.200290961132941 0.200019346427502 0.20150087067999 0.200019346427502 0.200706555216885 0.200890253925829 0.202557679718524 0.209909050405183 0.205166051560616 0.203268565145151 5 5 - 17657472 17657771 17657624.727 17657045 17660875 - gene protein_coding_gene TRUE TRUE AT5G43880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89949.1); contains domain PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED (PTHR21726); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6B6 (Hypothetical pro (PTHR21726:SF6) -0.853856656519684 -9.74788386770717 1.29611514627849e-06 0.00597379470919756 10.5332404290306 14.8530708919974 -0.853856656519684 0.0603685065803939 AT5G50740_at 5.96202938576726 5.58885267373984 3.94190797789214 3.83757019480893 4.34190160961977 4.4010277441017 5.05234889772909 4.53172395891009 6.22542825206573 6.03147757432887 7.98220804172711 8.6669126476976 7.17720958886079 7.55654593797742 8.36793062802539 7.20828212865051 5.54419066393266 7.06060259888865 6.7072668294321 0.201135242283002 0.201744922701400 0.222700357541883 0.213923337198009 0.202865134573111 0.212409392959792 0.205762175032769 0.201849615784238 0.200895449012314 0.201126639028405 0.210760285993875 0.215923069574988 0.207297010294403 0.206665061900072 0.208862008929691 0.203522837174048 0.204249599654848 0.200534287464026 0.202817466755853 5 5|0 -|/ 20653216 20655038 20654013.81 20653092 20655222 - gene protein_coding_gene TRUE TRUE AT5G50740.1|AT5G50740.2 metal ion binding| similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to OSIGBa0096P03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66434.1); similar to putative farnesylated protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23078.1); similar to Os02g0510600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046934.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to OSIGBa0096P03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66434.1); similar to PPAK motif; Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84491.1); similar to Os04g0390100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052639.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -1.02650288864814 -9.7417354567288 1.30399228412117e-06 0.00600879644523035 10.5294925154797 11.5906083876939 -1.02650288864814 0.112777144366133 AT5G59430_at 8.40457839995056 8.46219519091371 8.43433040870435 8.5613337495064 9.3739330551711 9.13374735379432 9.354508220142 9.1899026715166 8.62998441002419 8.53078669890919 8.12347691704288 9.0606505966234 8.24063848940905 8.46009957162329 8.24312946150129 8.78357553056635 8.43184227663468 8.26545988698054 8.3963885161483 0.143745922385106 0.143952018909452 0.14659441974899 0.142274702176578 0.149762726503100 0.149719177734446 0.144929446029862 0.146854330558366 0.145805380558999 0.146504696595906 0.147235305730016 0.145907657454707 0.148101911678943 0.144115299152283 0.149666361787323 0.141725588806518 0.144613524154811 0.141725588806518 0.150716961012036 5 0|5 /|+ 23987178 23987808 23987497.2 23984539 23988171 + gene protein_coding_gene TRUE TRUE AT5G59430.1|AT5G59430.2|AT5G59430.3|AT5G59430.4 ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1); DNA binding|ATTRP1 (TELOMERE REPEAT BINDING PROTEIN 1) similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to telomere binding protein [Solanum lycopersicum] (GB:BAF36749.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.2); similar to telomere binding protein [Solanum lycopersicum] (GB:BAF36749.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to TRFL1 (TRF-LIKE 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46590.1); similar to telomere binding protein TBP1 [Nicotiana glutinosa] (GB:AAN39330.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.840870921989139 -9.72570703891672 1.3247726251004e-06 0.00610322748383755 10.5197044939002 17.3493972810415 -0.840870921989139 0.0558711212542325 AT5G06270_at 2.63232179929985 2.95516347856076 2.35563634441981 2.53299629045965 2.02939802673232 2.39735388723719 4.13431966408275 4.32129681041135 3.96762329765251 4.07190394080374 4.85495859535582 5.18595710126877 4.83187628702878 4.97420275033343 5.40115237273046 3.77574202544404 4.10396998229912 4.05127475618097 4.20445674800549 0.25427282484929 0.25427282484929 0.267290278153040 0.258387195900430 0.263248602866450 0.263524565873505 0.257739538760202 0.257621694230173 0.262357529611441 0.25427282484929 0.25427282484929 0.257144668989650 0.260187748113616 0.264805132378167 0.260452121514293 0.25427282484929 0.262861067741821 0.257765942602815 0.257280864073975 5 5 + 1912920 1913234 1913063.545 1912551 1913675 + gene protein_coding_gene TRUE TRUE AT5G06270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11600.1); similar to H0913C04.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86164.1); similar to Os04g0415000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052757.1); similar to Os02g0536500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047044.1) -0.951571697172397 -9.63210477276032 1.45353104584566e-06 0.0066949639971651 10.4620357297814 7.28417065230917 -0.951571697172397 0.0957346265923157 AT5G01790_at 4.60074501530808 5.39516835977436 4.3803386693931 4.29788892470466 4.99099403304631 4.7623990871207 8.00041530774092 8.43427401845789 4.83450303132268 5.93319026912906 6.96809560198316 7.8093626500149 8.40888226043897 6.3645307829496 7.00248234775276 7.1476491977535 5.92542970317313 6.70583656838772 5.57843286336674 0.267710502029456 0.271916674136657 0.266956254750906 0.272942978219488 0.265979291927674 0.267291068137494 0.266431995596605 0.268206782448044 0.2952080884329 0.263374548565004 0.262569467395566 0.261153416504024 0.261153416504024 0.273314189777091 0.266065416803774 0.261153416504024 0.285977725261841 0.290611484680293 0.269522513297762 5 5 - 305068 305591 305363.455 304894 305693 - gene protein_coding_gene TRUE TRUE AT5G01790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40475.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20927.1); similar to Os01g0166500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042116.1); similar to Os05g0335500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055233.1) -1.22706516827215 -9.62891482464754 1.45815184596293e-06 0.0067147892506593 10.4600549713509 11.8528991071080 -1.22706516827215 0.162191594916184 AT5G39090_at 5.39683065505886 6.07778378607453 8.58833239958654 8.79464980307824 7.26892093358918 7.41989118609653 5.07973883664096 5.38311184940245 4.11690076682698 4.48915643830890 5.64161891020865 5.24415609646227 6.50652792669284 6.39808793794051 5.6834324843104 7.09961029357349 7.0112048049456 6.11746503743587 4.82112073400613 0.228949650107037 0.226444960125736 0.238468375078796 0.239458759965796 0.227088338492590 0.239268559035547 0.244537711203675 0.232790403184209 0.259651725437499 0.23940982267227 0.229032652845178 0.227664604704345 0.231427366834374 0.232043548953358 0.231429225637957 0.226444960125736 0.242483250058473 0.228684144034179 0.242649176509174 5 5 + 15661612 15662109 15661831.818 15660831 15662344 + gene protein_coding_gene TRUE TRUE AT5G39090.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 1.10248119352937 9.5501379239159 1.57747323407722e-06 0.0072626867696915 10.4108136362494 12.0954018892710 1.10248119352937 0.13638324195834 AT5G07090_at 9.36372161320815 9.31123569135664 8.80406369932168 8.91571034071797 9.15887616364847 8.79539020645764 9.48508034493516 9.74932625842123 9.08691809787545 9.0702763941608 9.37437159704506 9.88073159927348 9.3582154263541 9.13560722353317 9.98392392252072 9.064545962137 8.91563550751358 8.89976553308434 9.00666521241881 0.132817461742013 0.130723469440475 0.135959207861548 0.131550830321398 0.136107572324862 0.142906750204599 0.134633643922486 0.126530122811985 0.143484958300552 0.134553631019768 0.129360300072912 0.129845846501778 0.126530122811985 0.134246261616054 0.131585304553319 0.132161749492093 0.135921738395011 0.138652562888537 0.131843381961613 5 5|0 +|/ 2203050 2203778 2203536.6 2202381 2204079 + gene protein_coding_gene TRUE TRUE AT5G07090.1|AT5G07090.2 40S ribosomal protein S4 (RPS4B)|structural constituent of ribosome Identical to 40S ribosomal protein S4-1 (RPS4A) [Arabidopsis Thaliana] (GB:Q93VH9;GB:Q7XJS7); Identical to 40S ribosomal protein S4-3 (RPS4D) [Arabidopsis Thaliana] (GB:Q8VYK6;GB:Q944M1;GB:Q9FGI0); Identical to 40S ribosomal protein S4-2 (RPS4B) [Arabidopsis Thaliana] (GB:P49204;GB:Q42346;GB:Q9FL39;GB:Q9LYQ6); similar to 40S ribosomal protein S4 (RPS4D) [Arabidopsis thaliana] (TAIR:AT5G58420.1); similar to 40S ribosomal S4 protein [Glycine max] (GB:AAM93434.1); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain RNA-binding S4; (InterPro:IPR002942); contains InterPro domain Ribosomal protein S4E; (InterPro:IPR000876); contains InterPro domain KOW; (InterPro:IPR005824) -0.893361588277669 -9.54843201058105 1.58017155832821e-06 0.00727352968298474 10.4097403534254 18.3885352887172 -0.893361588277669 0.0806456436194608 AT5G42720_at 3.39077671000795 3.57550548794143 3.55416018287354 3.49007751021003 2.91399922976257 2.53309735538502 5.23720266041173 5.79591645507445 4.80401095184102 5.978775117330 6.12882774118754 7.82958422610706 6.14797521077713 6.39477353961922 7.1685517681333 6.52445463295946 6.15891912835066 6.47099863656078 5.64186636079497 0.299362172547477 0.291616477629441 0.302833115731438 0.298335195455770 0.29153839985791 0.305023095352001 0.293075298536685 0.289141170731048 0.304152066015053 0.285170926320794 0.290009331154038 0.288024899925145 0.287201944680671 0.294778558978409 0.295145455802653 0.287368824739131 0.301449223986841 0.290186511942072 0.286833350844808 5 5 + 17149205 17149950 17149626.2 17147417 17150071 + gene protein_coding_gene TRUE TRUE AT5G42720.1 glycosyl hydrolase family 17 protein similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G34480.1); similar to beta-1,3-glucanase-like protein [Olea europaea] (GB:AAK58515.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.04160196952779 -9.5465103796231 1.5832170906625e-06 0.00728596505122882 10.4085309957143 9.85028932585028 -1.04160196952779 0.121813601037303 AT5G58540_at 3.28028074286445 3.15020536467038 3.89163444473725 4.22942845532255 4.33375262426838 3.95688816809898 0.986680980071056 0.836391361571474 1.17213737893286 0.607673670349835 1.00917304463051 0.998733146608966 1.42413280877377 1.16669880228112 1.34085567225174 1.33008806988617 1.10625166096193 1.01069221778674 1.14659203364896 0.254727859608601 0.252724992126190 0.265005242592559 0.265706872065488 0.260342179946569 0.251649072129021 0.248713945455278 0.256658330084489 0.260700258504363 0.268899027647069 0.252636680071407 0.251448307495059 0.254522044700599 0.254161786995152 0.255342100657266 0.249165167928435 0.256696084006081 0.256116042250848 0.257621945729003 5 0|5 /|+ 23681845 23682337 23682058.6 23680362 23682542 + gene protein_coding_gene TRUE TRUE AT5G58540.1|AT5G58540.2|AT5G58540.3 protein kinase family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07150.1); similar to ser-thr protein kinase [Gossypium hirsutum] (GB:AAO59488.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.93622247148501 9.53440590285161 1.60254806165508e-06 0.00737332363167502 10.4009045145781 4.15755570380465 0.93622247148501 0.0940943555077202 AT5G51750_at 3.50092124452871 3.79139304316837 1.60296450289347 1.18110811255739 1.64903690678431 1.49867393412282 2.18702952728495 2.16072551864249 2.76780921331849 2.82312928453755 2.77189775148560 5.53618137586732 3.08548742322277 2.1864695903725 5.32892390967882 3.6536533954059 1.85593481003563 2.74124424743149 3.80255012539608 0.236893071759511 0.234792755127017 0.240474033976524 0.233783708220345 0.232789554123056 0.227083408912998 0.225773200886217 0.223888047298118 0.224202469902069 0.224883603525280 0.223888047298118 0.243241979362057 0.223888047298118 0.227715647920934 0.245883255647811 0.235607632497984 0.224808115898958 0.225762085017683 0.228595888990508 5 5 + 21039321 21039791 21039560.909 21037433 21040007 + gene protein_coding_gene TRUE TRUE AT5G51750.1 subtilase family protein similar to ARA12, subtilase [Arabidopsis thaliana] (TAIR:AT5G67360.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to SLP2 (subtilisin-like serine protease 2), subtilase [Arabidopsis thaliana] (TAIR:AT4G34980.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE79364.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE87035.1); similar to SBT2 [Solanum lycopersicum] (GB:CAA67430.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.925632308456744 -9.4823944858393 1.68857331194422e-06 0.00776743723494341 10.3679637317680 5.45955006742525 -0.925632308456744 0.092489194883303 AT5G44110_at 4.53600544159757 4.63009246914203 4.20071714176849 3.87647975605796 3.0435232286649 3.67571829085669 5.15333713154779 5.41137270928295 4.49408461195329 4.58886812900410 5.23950272607156 6.02753920546854 4.47144067148145 5.02938655539976 5.84235537607404 4.71827983478969 4.13380470256374 5.07904405007312 3.77685054461746 0.231283448353428 0.235314950314261 0.238959521554407 0.235320816029666 0.237167214918309 0.245918872381438 0.230721930180886 0.239315509637302 0.235045612148933 0.230721930180886 0.230721930180886 0.236612218032208 0.230721930180886 0.234456181451490 0.233324011021430 0.235290665381479 0.242164234853379 0.230957914942306 0.234591934004861 5 0|5 /|- 17771470 17771960 17771641.889 17771291 17772969 - gene protein_coding_gene TRUE TRUE AT5G44110.1|AT5G44110.2|AT5G44110.3 POP1 Encodes a member of the NAP subfamily of ABC transporters. Identical to Non-intrinsic ABC protein 2 (GCN-related protein 1) (NAP2) [Arabidopsis Thaliana] (GB:Q9XF19;GB:Q8LBC2); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439)|Identical to Non-intrinsic ABC protein 2 (GCN-related protein 1) (NAP2) [Arabidopsis Thaliana] (GB:Q9XF19;GB:Q8LBC2); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439)|similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G03905.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL55166.1); similar to Os02g0810300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048469.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -1.07216135281428 -9.4529947227059 1.73940526405696e-06 0.00799952480939796 10.3492205239511 8.99304088883072 -1.07216135281428 0.131821226017429 AT5G42370_at 3.41032327157825 3.95975562754451 5.92215134890489 5.87450664317684 6.52108800416766 6.01358468202985 3.97253331581406 3.98929531114334 2.40623863217833 2.98939464711592 3.75579168489069 3.65151365076536 4.9681882553873 4.8147614680187 4.10768346655407 4.53989914353838 5.08498998718987 4.56066494644284 3.4310573644987 0.259123794481113 0.255989551095577 0.277945282776549 0.267465652289489 0.260004868090586 0.271476243985627 0.256323285601372 0.259489598244274 0.279118595522593 0.264360382010751 0.256862342435956 0.255989551095577 0.258534814778753 0.255989551095577 0.261618779264580 0.257007159586585 0.260188113193325 0.266606044691561 0.257774038868321 5 5|0 -|/ 16956739 16957368 16957125 16956346 16958953 - gene protein_coding_gene TRUE TRUE AT5G42370.1 similar to alkaline phosphatase D [Pseudoalteromonas haloplanktis TAC125] (GB:YP_340375.1); similar to Os02g0592200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047291.1); contains domain Metallo-dependent phosphatases (SSF56300); contains domain no description (G3D.3.60.21.10) 1.05898552805166 9.41271845894998 1.81175501976237e-06 0.00833044958086735 10.3233976963751 8.64673817051795 1.05898552805166 0.129731744056297 AT5G17050_at 6.51414252582713 6.85340676571814 7.61372124860531 7.5049974474657 6.72821050646364 7.00603805866374 7.7615530762408 8.16921190984733 7.57038714802021 7.64793955840061 7.61664443099541 7.5548403248212 7.76467109587742 7.924949135598 7.41528423871692 8.03646978008671 8.14762895188853 7.52204394168301 7.54049665079113 0.130149304805915 0.133735476589154 0.124351681403843 0.124230260961039 0.131196001268333 0.128364430982125 0.129315176339345 0.129883367705541 0.130009595996754 0.130224880389188 0.123499590299042 0.123127015316870 0.129736613783815 0.123485031346198 0.123468215719411 0.127337208480714 0.132907707287271 0.123428296037258 0.124199453517070 5 5 - 5607885 5608406 5608199.091 5607791 5609495 - gene protein_coding_gene TRUE TRUE AT5G17050.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17040.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G30530.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17030.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:BAB41020.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.96102721174985 -9.38433655407234 1.86469606496316e-06 0.00857200781063564 10.3050992054932 14.9359556622852 -0.96102721174985 0.105306992585878 AT5G62720_at 9.7144528204465 9.6448404869754 10.1051794274243 9.86864589403623 11.0227426010617 10.5180606969653 8.74373697844879 8.27737364737813 8.35851212906367 8.11567831780482 10.4552502883541 10.6155539219734 10.3855866397080 10.5255298987912 10.8401084659839 9.96938345698907 10.0628876819857 10.5503997708214 8.13227049588704 0.135478182105969 0.137582953151462 0.136699990783605 0.137287508652848 0.135456129780916 0.140825577155916 0.133532054713893 0.160453117286681 0.151255343637888 0.154461285173466 0.136640422040021 0.133491499688107 0.138128289983883 0.133491499688107 0.137781429509395 0.133491499688107 0.153360302049798 0.138497624206530 0.151317553378224 5 5|0 +|/ 25209343 25211851 25210125.8 25209068 25212235 + gene protein_coding_gene TRUE TRUE AT5G62720.1|AT5G62720.2 integral membrane HPP family protein similar to integral membrane HPP family protein [Arabidopsis thaliana] (TAIR:AT3G47980.1); similar to Os03g0684700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050921.1); similar to hypothetical protein [Oryza sativa] (GB:AAK14421.1); contains InterPro domain HPP; (InterPro:IPR007065) 1.04005106550193 9.3666745488887 1.89848636164632e-06 0.0087254433181265 10.2936694542905 19.0507496506726 1.04005106550193 0.126340876515232 AT5G23820_at 6.07105361293264 6.65285487545383 2.40569670009825 2.80457478815120 1.79228288394055 2.65570928479867 4.48710328760983 4.23129395040662 3.07211447304187 3.57101981133802 4.48676226453356 6.51731421409432 4.3988685815423 4.10133332888452 7.21406788111218 5.86272704164615 3.35860792063693 4.71594167092294 3.3733925418135 0.268053568151299 0.261686263672756 0.261871276675122 0.259416662389605 0.263697319904404 0.264366893634670 0.25213978340329 0.258682545300127 0.255013474851517 0.253481240801987 0.255570432317306 0.255922990934882 0.251425459355704 0.251425459355704 0.259297112872926 0.251425459355704 0.266938844573632 0.254987757318472 0.256206835980384 5 5|0 +|/ 8031448 8032716 8031959.6 8031271 8033018 + gene protein_coding_gene TRUE TRUE AT5G23820.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23840.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) -1.35501464942914 -9.32616265100697 1.97852698752270e-06 0.00909133150766681 10.2673284841984 8.09796874208365 -1.35501464942914 0.197959710602235 AT5G05390_at 1.16713729563954 1.10783980550334 2.79940328355606 2.81445668537237 1.79381026388040 2.35936793208622 1.41685637095538 1.24374995925760 1.19584282611655 1.46626795848458 1.90833991732646 1.78523306308313 2.20946863293618 2.60524367766596 1.87174786592099 2.06895470207056 4.21113326432796 1.77393934125304 1.36087642504400 0.232801772600071 0.23535458832119 0.234867563468247 0.233220509153306 0.225886346539895 0.232301130327109 0.230610038908321 0.233521850255982 0.241023440253443 0.230959732747783 0.227040767245761 0.233510760517689 0.234474951010966 0.235808729462389 0.229798600850438 0.226879540754053 0.262091010159539 0.230099017291993 0.231248171161529 5 5 + 1596373 1597019 1596666.727 1594754 1597043 + gene protein_coding_gene TRUE TRUE AT5G05390.1 LAC12 (laccase 12); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to LAC3 (laccase 3), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G30210.1); similar to LAC13 (laccase 13), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07130.1); similar to LAC5 (laccase 5), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G40370.1); similar to laccase [Populus trichocarpa] (GB:CAA74104.1); similar to Multicopper oxidase, type 1; TonB box, N-terminal [Medicago truncatula] (GB:ABE84876.1); similar to diphenol oxidase laccase [Glycine max] (GB:AAM54731.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.941492059693027 9.27774564859408 2.07901748275971e-06 0.00955100631579812 10.2356192691538 3.66045434684207 0.941492059693027 0.102900477624566 AT5G05600_at 3.98202170283185 4.75079496223571 6.06167854001501 6.49833804568962 4.48071771379 4.76601878086797 2.15815778241874 1.89992070124375 1.91286425304883 2.85007220354996 2.84902811452352 2.78577297147117 3.00729474290306 2.92514631723633 2.64838902732506 6.14034946950532 2.97537030413410 3.56639991218318 1.30315731843318 0.271374581038855 0.275630267862639 0.276688198878164 0.270278784788411 0.265123133527251 0.271160380067095 0.267442995824463 0.281718164394799 0.269190791484838 0.265387886011015 0.263695343702484 0.262198908155442 0.262198908155442 0.268192011661232 0.262739201607147 0.277811416313298 0.266046641107488 0.265123159587070 0.268147953121993 5 0|5 /|+ 1673303 1674576 1673916.6 1672121 1674740 + gene protein_coding_gene TRUE TRUE AT5G05600.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G11180.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE94015.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 1.19790675522540 9.23617039109545 2.16972992774991e-06 0.00996556955815533 10.2081909128431 7.01683108651369 1.19790675522540 0.166866961247236 AT5G58260_at 9.80257331967182 9.69914365094626 9.21875076564673 9.43295066342001 9.95039299720537 9.69708100744649 10.7071003818594 10.7164437930453 10.2013504005281 10.3427207263754 10.5078888597489 10.7220267068350 10.5385642116681 10.4895389396018 10.8220904546116 10.9570313012344 10.3259377584322 10.4238237141043 10.2269144930349 0.095368017071339 0.0923715712079852 0.0946734289049277 0.099440963881884 0.0951415249486164 0.0961162141368273 0.0944976210455178 0.098394625702733 0.115562534288369 0.0923715712079852 0.0923715712079852 0.0940394672238848 0.0923715712079852 0.0975375881226482 0.0967448988692265 0.0923715712079852 0.100642761616233 0.0991791274524553 0.0938947463553938 5 5|0 -|/ 23578329 23579101 23578719.1 23578102 23579170 - gene protein_coding_gene TRUE TRUE AT5G58260.1 Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. similar to Os01g0882500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045009.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82572.1) -0.808374051138476 -9.23447636842713 2.17351593732388e-06 0.00998078518419127 10.2070693808665 20.330733547368 -0.808374051138476 0.0601557417677662 AT5G66740_at 0.74658347257646 1.20322610282628 1.16788398131136 1.49929267575108 1.31020436124645 0.987243210785873 5.21111199804583 5.23189201639909 2.54794254860443 3.33815138978068 3.43077934041383 3.46010908070147 3.88787301199176 4.22935646302949 3.13561484375616 4.42080692500647 2.85124497927647 3.25919490581491 3.06953914526033 0.290993412988712 0.273700920688369 0.277010969754375 0.267986574114929 0.283777438884234 0.285292267017243 0.278190599146171 0.281624899615049 0.271499378502565 0.267986574114929 0.269961747969108 0.273012784720087 0.267986574114929 0.269737324510547 0.267986574114929 0.270765113676357 0.278202570492648 0.272668241224031 0.273865176227668 5 5 + 26665124 26665754 26665429.364 26664956 26665784 + gene protein_coding_gene TRUE TRUE AT5G66740.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G75160.1); similar to BAC19.5 [Lycopersicon esculentum] (GB:AAG01120.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) -0.972137952999887 -9.23335205906978 2.17603263497953e-06 0.009990165827191 10.2063248583417 5.45447146318312 -0.972137952999887 0.112564034743203 AT5G15310_at 4.65117005920813 5.61623613797436 3.77422953553615 3.74006637953856 5.95712326660579 5.08497654878214 6.50003699463162 6.96953405327734 5.78874832334556 5.9131348256797 6.18875211717766 7.4041048445734 7.21265555367809 6.17747603768679 5.66688348869959 6.89957169308074 5.19038954423433 5.78891788794342 6.56789607804001 0.265551366223347 0.267509278861924 0.287362775604206 0.278956978760192 0.267023536567502 0.274733179984794 0.269497296869615 0.271443778485741 0.278651864086692 0.265551366223347 0.265551366223347 0.269288384943921 0.271302256710331 0.276300893331924 0.272781386671282 0.265551366223347 0.294680263946533 0.269038881519028 0.267655669319939 5 5 + 4975439 4976082 4975756.636 4974674 4976230 + gene protein_coding_gene TRUE TRUE AT5G15310.1|AT5G15310.2 AtMIXTA/AtMYB16 (myb domain protein 16); DNA binding / transcription factor|AtMIXTA/AtMYB16 (myb domain protein 16) Member of the R2R3 factor gene family. similar to MYB106 (myb domain protein 106), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01140.1); similar to protein 1 [Petunia x hybrida] (GB:CAA78386.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to MYB106 (myb domain protein 106), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01140.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -1.54171201848466 -9.22011833194797 2.20589410922435e-06 0.0101250539613398 10.1975511823358 11.4896817743973 -1.54171201848466 0.23939077948239 AT5G14920_at 9.20281375688979 9.37506536012431 6.3387187338431 6.40243529989587 9.10502929252138 9.19037150076759 4.00329702421465 4.61989709825636 5.93741812759118 6.29494345558293 9.69839445103877 10.0228178971079 9.14872834722161 9.48203024121853 10.3516169953151 9.03838107533668 8.38840448511396 10.2135289677258 7.70237152598884 0.175173039788445 0.173638271123923 0.182012685205952 0.191049069282616 0.175422528288188 0.179977888632147 0.193864495034699 0.202650359211634 0.189088604795485 0.191594298788923 0.179854914906412 0.178192179497137 0.173638271123923 0.178137660689400 0.177151162643964 0.180877121321064 0.180299367042305 0.177253669845837 0.1943232949644 5 5|0 +|/ 4827088 4827721 4827517 4826482 4827983 + gene protein_coding_gene TRUE TRUE AT5G14920.1|AT5G14920.2 gibberellin-regulated family protein|structural constituent of cell wall similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854)|similar to ATEPR1 (Arabidopsis thaliana extensin proline-rich 1) [Arabidopsis thaliana] (TAIR:AT2G27380.1); similar to hypothetical protein [Brassica napus var. napus] (GB:AAS68179.1); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882) 0.969721683551873 9.21926030800408 2.2078454871878e-06 0.0101318029407048 10.1969816784599 15.3736529302628 0.969721683551873 0.112313591320107 AT5G29000_at 4.85543746837471 4.60788483347195 6.92075194504965 6.78595791712371 6.6938819768842 6.9337639011497 4.88808904648623 5.12445026393259 4.03188194412216 4.87304615670406 6.2176039244385 5.91642745831116 5.77274387949285 5.9488118835305 6.02056122972537 6.36162833470895 6.95938448507825 5.77961420968959 4.34807286509812 0.207311750581457 0.199707538335743 0.204662625739599 0.204429615367226 0.205451422941866 0.220312244572342 0.209713224348511 0.203312389767399 0.218357034729593 0.208374511308815 0.200062368803696 0.202979957443631 0.209144316485549 0.210454207699412 0.200856206943876 0.199707538335743 0.207598579296279 0.201891410653971 0.207233535377292 5 5|0 -|/ 11022355 11023477 11022883.778 11022087 11024964 - gene protein_coding_gene TRUE TRUE AT5G29000.1|AT5G29000.2|AT5G29000.3 myb family transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to CDPK substrate protein 1; CSP1 [Mesembryanthemum crystallinum] (GB:AAF32350.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.845060656428266 9.1775873688385 2.30491083800466e-06 0.0105749309247654 10.1692257681510 11.1211591261908 0.845060656428266 0.075998724405227 AT5G51010_at 9.15084165369664 9.29302193546175 9.3315174582706 9.21408973123152 8.58718565363985 8.48902074757378 9.97069597435573 10.0359267195715 8.6251513522908 9.24441361150605 10.1356613435146 10.0211321492951 9.22790009314463 8.86590667683397 10.1179692125469 8.92719036253788 8.87701609831475 10.3482795723585 8.77750762195186 0.152748165168567 0.150651875497926 0.151668893851376 0.151744685752935 0.156824220335370 0.159082896942577 0.156623684559573 0.152069849306165 0.168255878753025 0.153063767746059 0.150669081670784 0.148711240980969 0.151717249968177 0.17253906042326 0.154967709388086 0.154198117509795 0.170005771952248 0.151341967492527 0.169189787343325 5 5|0 +|/ 20761862 20762535 20762117.778 20761792 20762929 + gene protein_coding_gene TRUE TRUE AT5G51010.1 rubredoxin family protein similar to rubredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G17170.1); similar to Rubredoxin-type Fe(Cys)4 protein [Medicago truncatula] (GB:ABE80208.1); contains InterPro domain Rubredoxin-type Fe(Cys)4 protein; (InterPro:IPR004039) -0.75662684257313 -9.15041511039805 2.37068653548938e-06 0.0108743391382898 10.1510262186713 18.4827822178008 -0.75662684257313 0.0378732424923831 AT5G18120_at 8.2702594688607 8.58404744500917 9.57441003989608 9.5101150046097 9.8660567630253 9.68781104610905 8.0796786888649 8.06747627907191 7.41451834388809 7.2860722199313 9.26739484760213 8.88364366232624 9.28141540899587 9.34143896647102 8.83935471784668 9.36473407176852 8.98224692729676 9.03158710651803 7.05461359545597 0.16031797105224 0.148554390445493 0.151489461025174 0.151051628538919 0.161498933723645 0.159324274149710 0.161936674865626 0.158412641484052 0.164325896020392 0.166196736327131 0.154321628019966 0.151573684913857 0.154602781434864 0.158063371355204 0.153926758198416 0.148554390445493 0.164191283724339 0.148985962781678 0.188084739145966 5 5|0 +|/ 5992475 5993645 5993320.556 5990958 5993938 + gene protein_coding_gene TRUE TRUE AT5G18120.1 ATAPRL7 (APR-LIKE 7) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. similar to ATAPRL5 (APR-LIKE 5), electron carrier/ protein disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G03860.1); similar to Thioredoxin domain 2; Thioredoxin fold [Medicago truncatula] (GB:ABE86406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.808466705861724 9.1435716174432 2.38757136049873e-06 0.0109494022592472 10.1464298440430 17.1428376836117 0.808466705861724 0.063470538796558 AT5G54490_at 4.68707191907716 5.19402141472538 6.4731053537454 6.74919551902105 6.26143106511526 6.10776614489388 2.44380253423497 2.28267590327463 3.45025460618914 2.74040614424023 3.99737103713473 3.92364625883543 4.00082386858492 3.48664797891839 4.11244621624061 3.63725550329827 3.84158555691118 3.61502929842519 3.1050798626189 0.256922499247892 0.23883081784022 0.245619491776957 0.245400255866535 0.245911577672503 0.260692443177488 0.246218153453284 0.242008712666674 0.247565525963266 0.248456296842756 0.245470423671006 0.238585549709782 0.244949807905328 0.244150357819604 0.238585549709782 0.238585549709782 0.246555649932949 0.243858909999525 0.242861849678038 5 5 + 22138687 22139043 22138866.545 22138630 22139157 + gene protein_coding_gene TRUE TRUE AT5G54490.1 PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27280.1); similar to Avr9/Cf-9 rapidly elicited protein 20 [Nicotiana tabacum] (GB:AAV92890.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.94086939250232 9.12611216947475 2.43124205310878e-06 0.0111472448135038 10.1346801129144 8.48759919133247 0.94086939250232 0.107070120353302 AT5G40690_at 4.3583837217685 4.91587183152393 7.33982014974597 7.7134903143947 6.41783238159654 6.16978770483875 3.07834984382527 2.69682331159806 2.96355514414795 2.67079989464402 3.14691518057004 2.67603057490491 3.01353808833959 3.3171910935789 3.06579955187376 3.43644485411739 3.97087162941829 3.8017474735023 2.61260128558348 0.250141248101101 0.254321353478276 0.243936100178609 0.253429656932493 0.243969623279864 0.245270428130035 0.239217915107724 0.244102987606152 0.252940029822590 0.252725394393873 0.246670383586726 0.240553255889775 0.247277578198399 0.244583859976852 0.244611061629701 0.242049095722174 0.248836025418057 0.246955670762783 0.245471276271088 5 5 + 16308069 16308336 16308180.545 16307939 16308811 + gene protein_coding_gene TRUE TRUE AT5G40690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41730.1) 1.06822397072744 9.11347652255826 2.46338685969608e-06 0.0112921653648468 10.1261557958740 8.36257128103478 1.06822397072744 0.140324929578245 AT5G48250_at 7.21417995926139 7.08488427418281 6.1970362316265 6.10330626803739 7.60810011199139 7.44262027202306 1.44476239723222 1.61035302315336 1.91616182482468 2.06416383547180 2.10093722251062 2.23201451937562 1.95539333374552 2.27297687726782 2.58093635223877 1.79973695325624 2.11610190671109 2.32786712452209 1.29140535702472 0.258014989423215 0.259511653612584 0.257771718034233 0.252849794247966 0.251697156429309 0.253542293278809 0.247248091810659 0.242391863190463 0.245868736010222 0.259476710939313 0.243714599534201 0.244556462925019 0.244033966461057 0.24610057680406 0.242391863190463 0.247061236346926 0.242391863190463 0.242391863190463 0.248863659988432 5 5 - 19578959 19580903 19579794.25 19578545 19580948 - gene protein_coding_gene TRUE TRUE AT5G48250.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 10 (COL10) [Arabidopsis Thaliana] (GB:Q9LUA9); similar to COL9 (CONSTANS-LIKE 9), zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G07650.3); similar to COL1 protein [Brassica nigra] (GB:AAN09808.1); similar to COL1 protein [Brassica nigra] (GB:AAN09810.1); similar to Os02g0724000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047975.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.772597257171276 9.10249458329907 2.49169893969262e-06 0.0114194562406113 10.1187328403079 7.55339992151045 0.772597257171276 0.0490409294529362 AT5G56100_at 7.67753019501526 7.9156714028129 7.84388000336151 7.85028550853651 8.61373546286056 8.19295862845721 7.92297821037665 8.13580349211258 8.65434813590483 8.3720695133932 8.20497739028914 8.5866538559853 8.18043909923725 8.0254731555369 8.39466677038762 8.40973759993478 8.19223905013883 7.58394852936446 8.08708156024375 0.132185602889380 0.126065784850926 0.128632714616342 0.13472561356672 0.129555864364770 0.134479111502091 0.132044725072622 0.126371395767923 0.132005955506295 0.129292065086433 0.129927758183310 0.129274922017079 0.129247566718216 0.128404541651343 0.127559641937837 0.125535552601048 0.136285070288812 0.139791050781313 0.132195462750562 5 5 + 22734409 22734747 22734571.182 22734341 22734977 + gene protein_coding_gene TRUE TRUE AT5G56100.1 glycine-rich protein / oleosin contains InterPro domain Oleosin; (InterPro:IPR000136) -0.873575238968577 -8.98406967410664 2.82044377879604e-06 0.0129232733944435 10.0378364054248 16.3033220302116 -0.873575238968577 0.0914246348040963 AT5G54500_at 10.3318867274943 10.4749174714682 11.3485018737377 11.2601827209689 11.1982984244656 11.2261993855184 8.63759950509055 8.9502445046904 9.09330263332147 9.18884207507831 10.3886183825833 10.3622613281530 10.4816796757935 10.4520447396402 10.2482478232330 10.3118006338128 10.2780124547161 10.1569073629912 9.0336316426256 0.114847767268313 0.116683820526487 0.113538235534026 0.113795359946075 0.117572104002134 0.121784967080030 0.11696404032424 0.113160240352742 0.124674358068182 0.116826413643950 0.10904501284897 0.10904501284897 0.10904501284897 0.117922262708614 0.114989753135883 0.110623508246110 0.11333500739111 0.113311594835928 0.123732322802023 5 0|5 /|+ 22142909 22143430 22143159.9 22141782 22143730 + gene protein_coding_gene TRUE TRUE AT5G54500.1 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 0.785693643608963 8.93619547552756 2.96643175541067e-06 0.0135892238715363 10.0046871120261 20.1485814935745 0.785693643608963 0.0616189863002328 AT5G40480_at 5.83601505972429 5.83406546826766 6.14618765555267 6.2685552200222 5.97082186985337 6.07927319978488 6.34178422251998 6.21815146070965 4.82688123325290 5.45361515796193 5.40101609035509 5.96236827710577 5.59547042929197 5.53109434219331 5.98708160638471 6.20128977459164 6.11742802751155 5.71162330426342 5.65721347520487 0.212421923695969 0.201717561311062 0.199955928358761 0.202161430667097 0.195487823586404 0.206884703156224 0.197942023386218 0.198923312934281 0.206700964511741 0.202396382388089 0.200602032506697 0.207974733876245 0.198778637485676 0.210343036937383 0.201317553133708 0.198536372745888 0.217051326377558 0.205328079394386 0.195487823586404 5 5|0 +|/ 16240388 16241147 16240864.3 16230589 16241210 + gene protein_coding_gene TRUE TRUE AT5G40480.1 EMB3012 (EMBRYO DEFECTIVE 3012) similar to hypothetical protein DDBDRAFT_0187985 [Dictyostelium discoideum AX4] (GB:XP_636668.1); similar to Os09g0565500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063948.1); contains InterPro domain Bacterial Ig-like, group 2; (InterPro:IPR003343); contains InterPro domain Invasin/intimin cell-adhesion; (InterPro:IPR008964) -0.734937167320645 -8.93163143071484 2.98077099162295e-06 0.0136519311416331 10.0015133038605 11.6498524880220 -0.734937167320645 0.0354759412212498 AT5G09290_at 4.98120827799318 4.98687172997469 7.0669606330738 6.72865287532754 4.75643513400546 5.12995667495042 2.08513036322833 1.93489338437327 2.2118905110028 1.97450259110366 2.39710005635028 2.44217443924027 2.56166325049871 2.45248974223133 2.41345955191707 2.53760843857927 2.72089915265870 2.66226449321991 1.90433907818007 0.311226147385538 0.312128869002132 0.322920984050863 0.330679036636750 0.306020323619485 0.311671956156433 0.302291501832842 0.307987471292859 0.308737649094460 0.300107526786646 0.298019627414758 0.304931477387055 0.304825550730650 0.302520990321292 0.309317858400996 0.304925437298743 0.298019627414758 0.300984992563012 0.298019627414758 5 5|0 +|/ 2883217 2884064 2883595.3 2882429 2884230 + gene protein_coding_gene TRUE TRUE AT5G09290.1 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative Identical to Probable SAL4 phosphatase (3'(2'),5'-bisphosphate nucleotidase 4) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 4) (DPNPase 4) (Inositol-1,4-bisphosphate 1-phosphatase 4) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 4) (IPPase 4) (SAL4) [Arabidopsis Thaliana] (GB:Q84VY5;GB:Q9FY86); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.864483632752263 8.90404722386264 3.06904869665659e-06 0.0140531739819905 9.9822809818831 6.98561435945706 0.864483632752263 0.0910099240175604 AT5G25930_at 6.48049476600663 7.09913704649882 9.77081874730252 9.16496222899858 6.88459138738993 7.06308608678702 2.62172103874707 2.65214432396789 5.39014024057774 4.0691858792142 5.56082098152342 6.33877884650243 4.87586570164524 5.3820188976209 4.69976780147048 4.65622974247164 4.03047763791781 5.58012964444702 3.95508664253703 0.300412054670832 0.303059895347594 0.315275136029185 0.31645280006107 0.303145833080281 0.301013590203748 0.301680316346636 0.309038715191073 0.297507181590109 0.299064829748798 0.296429131102036 0.296429131102036 0.296429131102036 0.299864983228032 0.312152366896 0.296429131102036 0.299245091090422 0.307039636625668 0.297886328371643 5 5 + 9053301 9053902 9053673.909 9050797 9054146 + gene protein_coding_gene TRUE TRUE AT5G25930.1 leucine-rich repeat family protein / protein kinase family protein similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G25910.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17641.1); similar to putative CLAVATA1 receptor kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17639.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81143.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 1.09148491280641 8.86628612129597 3.19451823014539e-06 0.0146245044576056 9.955812188227 11.2731104919504 1.09148491280641 0.153088964712031 AT5G66520_at 3.18677092749682 3.63813662395394 2.98743212204086 3.04531140574182 3.65797384185396 3.84776211659099 4.544799075882 4.39901900005327 4.75301415928201 5.58483614459328 5.17486942611575 6.97007399460237 5.24174558805596 5.93080105919156 6.23678728867548 6.16522293599423 5.14539082137421 5.30107251529721 5.26758939007764 0.249143195172519 0.237296143289842 0.244338183788963 0.247388437405662 0.237296143289842 0.238552102877233 0.237296143289842 0.245551166048922 0.249135507179282 0.239742149181505 0.241320354717706 0.245793302841228 0.238075954211662 0.246807990170310 0.254256355761334 0.239545479486063 0.24109957554512 0.249138768260609 0.237296143289842 5 5 + 26570368 26570938 26570715.818 26569105 26570967 + gene protein_coding_gene TRUE TRUE AT5G66520.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G06540.1); similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G48910.1); similar to Os08g0249600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061372.1); similar to Os01g0176300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042180.1); similar to Asp/Glu racemase; Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83029.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.854427842939463 -8.8657832245223 3.19622625250174e-06 0.0146291275577005 9.95545857764187 9.1496799816922 -0.854427842939463 0.0889764257503901 AT5G17270_at 3.80773825224932 3.7702243468459 4.48779337492797 4.23628686322231 4.16702543777584 4.23865500778939 3.89173216630903 4.08592232279073 3.72337171649511 4.18304669225246 3.30477363158109 3.409985674686 4.03217948140008 3.36124345012065 2.87053856320075 3.58178864132152 4.11889435613756 3.14369686973827 4.00190606342087 0.208875728675512 0.205502014739602 0.207362671238636 0.205843795780378 0.205691593333407 0.205502014739602 0.210489849090501 0.210315689705929 0.205502014739602 0.210924546417996 0.210001864533312 0.205502014739602 0.207946477438028 0.213044528835559 0.214589941923383 0.205502014739602 0.205502014739602 0.205759933315661 0.205502014739602 5 5 + 5684713 5685486 5684991.091 5679997 5685599 + gene protein_coding_gene TRUE TRUE AT5G17270.1 tetratricopeptide repeat (TPR)-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37130.1); similar to Os07g0455100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059558.1); similar to tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC65407.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.768156636907004 -8.86275871284712 3.20651949195933e-06 0.0146730331952059 9.95333128691132 7.80933675861184 -0.768156636907004 0.0567406713398295 AT5G06570_at 5.21802312674237 5.54183642143914 5.22669524653723 5.19814808697649 7.12688630949018 6.27143183402941 2.10820680099730 1.68411198893776 2.62122276325079 1.93552120855643 2.89532983708062 3.59243396091456 2.713549691401 2.89845811949417 2.76546869941764 4.83131111007026 3.83046984915165 2.82320203552543 1.20715756933411 0.282514956543052 0.293104979002481 0.275552365702403 0.289969846002845 0.289729277727590 0.282724804536589 0.272948408541275 0.270038863447174 0.275730792541597 0.273333844663266 0.274404096049806 0.270038863447174 0.270038863447174 0.270038863447174 0.274750299368063 0.272740093258403 0.271885446424051 0.270571372665757 0.278235023224409 5 5 - 2008108 2010599 2009652.273 2007601 2011042 - gene protein_coding_gene TRUE TRUE AT5G06570.1|AT5G06570.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16080.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89016.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.18242787714252 8.85950271912424 3.21764067310571e-06 0.0147207060794586 9.95104000771579 7.40445669019158 1.18242787714252 0.174547635066788 AT5G64580_at 6.63548955039137 6.57381421450488 6.62606461289277 6.48711520304178 7.00428606519068 6.74136262456263 7.47080540667084 6.92711979074676 6.89768021201818 6.97089028250913 7.03122228531154 7.4889314980068 7.09642456902075 7.36391114502169 7.67405932073978 7.70417037501511 7.3747118335079 6.94117086449194 6.83627317592565 0.168277205777603 0.164198527074282 0.171166590979785 0.168225464359117 0.163765023095837 0.16957275664017 0.169428095653499 0.171472145691667 0.172749562907656 0.167269979036846 0.166995246933249 0.163170425350825 0.168709999708639 0.188211675657492 0.174500802466991 0.170514944816928 0.172806197446818 0.172965495514876 0.163170425350825 5 0|5 /|- 25834627 25835326 25834962.667 25834318 25838756 - gene protein_coding_gene TRUE TRUE AT5G64580.1 AAA-type ATPase family protein similar to VAR1 (VARIEGATED 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT5G42270.1); similar to cell division protein [Cyanidium caldarium] (GB:NP_045094.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.911548975980105 -8.81809804834643 3.3627652399423e-06 0.0153812882074961 9.9217964849269 13.9262270801038 -0.911548975980105 0.107772016030883 AT5G47060_at 5.68692747537669 6.76940755564395 7.83565089895004 7.95444629027994 8.59716088625746 7.78839765989521 4.68011795576144 4.82808375409602 3.88219161843016 3.61873818589182 5.49199510306104 6.91733890651965 5.74059546100755 6.40197834288452 5.29069111258763 6.23403847734123 5.31840833214304 5.82741836252446 3.07733322359383 0.244816582919726 0.231862106449507 0.244120279850891 0.241787066362843 0.233737167530370 0.244723825430181 0.238804948153975 0.23570868588921 0.248339948457364 0.242971285215887 0.231862106449507 0.232133313822810 0.236112872988765 0.247221006446927 0.246508701440042 0.234359116091731 0.264037425026754 0.251526511801921 0.231862106449507 5 5 + 19134187 19134817 19134469.909 19134015 19135273 + gene protein_coding_gene TRUE TRUE AT5G47060.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to hypothetical protein 26.t00087 [Brassica oleracea] (GB:ABD65032.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 1.45789464218269 8.81161021727069 3.38614074093743e-06 0.0154848216083069 9.91719625923201 11.4819719036479 1.45789464218269 0.236133536020862 AT5G62840_at 7.60341535653488 7.73633467088538 7.78205531125695 7.8065949736902 7.72992778425627 7.97449868308729 8.58136243304442 9.05972438426506 8.5229085648153 8.4764791372714 8.67390930350369 8.84780716844184 8.65444903109715 8.98926398863602 8.90762426447122 9.1257431455782 9.01021903676027 8.60677069185976 8.32069467043722 0.140876470949948 0.134190996681252 0.150179451810362 0.136241511289882 0.134491233415992 0.134777348521059 0.139431810056260 0.136161624736228 0.146194705377330 0.134583708886919 0.130796206276085 0.130796206276085 0.134564785664080 0.136701228650171 0.141793627873933 0.130796206276085 0.143169427707881 0.137152459535935 0.132839718395291 5 5 - 25245553 25246192 25245849.364 25245451 25246909 - gene protein_coding_gene TRUE TRUE AT5G62840.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72361.1); similar to Os01g0660900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043776.1); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) -0.868275102106496 -8.78447048390224 3.48584985841117e-06 0.0159373055526559 9.8978997168754 16.6802395927783 -0.868275102106496 0.095872099465024 AT5G20150_at 7.9867907918695 8.36729567275702 7.27112147345346 7.27870400872252 8.04368245250884 7.01979416512283 7.90770491262017 7.96321467311973 6.36329204929042 6.2934600941808 6.54868287150531 7.08195618764111 7.09979799123641 6.36463334331957 5.5338320658656 6.6274031658727 6.56606910747624 5.919926167391 6.00786625943372 0.291806084259936 0.281437150135096 0.29107428316363 0.282509522984926 0.278469557235898 0.286248901216016 0.280720160282918 0.288695670867955 0.283923582199427 0.272571765954149 0.272571765954149 0.272571765954149 0.276322613755272 0.287418306481017 0.281431183037493 0.276899771673153 0.289613783436548 0.285604589776009 0.274010841957474 5 0|5 /|+ 6803036 6803293 6803173.9 6802374 6803627 + gene protein_coding_gene TRUE TRUE AT5G20150.1 SPX (SYG1/Pho81/XPR1) domain-containing protein similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26660.1); similar to Os06g0603600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058013.1); similar to IDS4-like protein [Solanum lycopersicum] (GB:CAG29394.1); contains InterPro domain SPX, N-terminal; (InterPro:IPR004331) -1.23381274178354 -8.75978481568909 3.57930806550892e-06 0.0163610171674413 9.88027349674811 14.0744520588585 -1.23381274178354 0.189277031895650 AT5G52470_at 10.6427635205773 10.7314851168782 10.9258403016484 10.8517490439431 10.8419998140932 10.8142091460858 11.1269197583918 11.2210058219761 10.6501286286883 10.6281628060969 10.5206900019241 10.3931317153704 10.5533824796113 10.3992997659894 10.5547534450455 10.3242642395178 10.7217739754865 10.2857884245203 10.5416565953198 0.0658554986250769 0.0645421159700259 0.0667115191464246 0.0659368221066351 0.0655919391143088 0.0716479019633999 0.0669020273268381 0.0659655593772493 0.0670763060980047 0.0650617766895289 0.0646685105657494 0.0653499709765022 0.0647047048463803 0.0671210512833476 0.067714704616575 0.06429067606834 0.0708636732821009 0.0655689274962531 0.06429067606834 5 5|0 +|/ 21312379 21313708 21313261.222 21311454 21313902 + gene protein_coding_gene TRUE TRUE AT5G52470.1 FIB1 (FIBRILLARIN 1) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. Identical to rRNA 2'-O-methyltransferase fibrillarin-1 (EC 2.1.1.-) (SKP1- interacting partner 7) (FIB1) [Arabidopsis Thaliana] (GB:Q9FEF8;GB:Q9FUZ8;GB:Q9SP30); similar to FIB2 (FIBRILLARIN 2) [Arabidopsis thaliana] (TAIR:AT4G25630.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692) -0.708236318176904 -8.747503475844 3.62681207216945e-06 0.0165745311698144 9.87147774686344 21.4323889901 -0.708236318176904 0.0262367905324073 AT5G25840_at 8.82165657227367 9.00168306033863 8.8777997706476 8.93072869608673 9.75356495150306 9.85644873880767 7.31683369579075 6.9912391685367 7.34733122836726 6.36626048640242 9.28153922081568 9.49023965050025 8.57419304171377 8.48263028432601 9.00926252360478 9.1753502025375 8.74172118709533 8.82161284487123 7.21185537210973 0.181550761603442 0.178124283720183 0.174724075703359 0.174724075703359 0.182453775596144 0.178074622873760 0.181681534007670 0.184170817861199 0.185220344116009 0.206758424884907 0.179484772303788 0.179601312624644 0.179559857911704 0.180556965580009 0.184846569012573 0.181604133518966 0.180664282065397 0.176550471949201 0.193990103591417 5 5 - 9010940 9011399 9011152.818 9010727 9011501 - gene protein_coding_gene TRUE TRUE AT5G25840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79770.1); similar to Os06g0554200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057846.1); similar to Os01g0199700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042311.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26169.1); contains InterPro domain Protein of unknown function DUF1677, plant; (InterPro:IPR012876) 0.781688389402544 8.73206763887789 3.68748817574045e-06 0.0168481334749581 9.86039768984658 16.6548531559445 0.781688389402544 0.0674264759745732 AT5G42420_at 7.28642176269782 7.31852433161234 7.36630900909214 7.61348070630043 9.04996825439495 8.54462828609294 5.98232713689465 5.18401038144114 4.73631132780784 4.81299402228176 7.35747412611412 7.67657017277407 7.21766656605614 7.32492818951396 7.57933758840744 6.55749647558678 6.78760315921309 7.38673355328882 4.15619656179373 0.219253648129841 0.204962393865114 0.204413479280121 0.210058409120470 0.232056135910547 0.211345195634206 0.224513486811385 0.210347217868478 0.223135956367922 0.212303046582233 0.204031604354937 0.205855201074947 0.21567440790151 0.212956812838145 0.223952100198189 0.216430516843876 0.235220494409679 0.209934758509724 0.230974984490569 5 5|0 +|/ 16986726 16987216 16987050.222 16985886 16987658 + gene protein_coding_gene TRUE TRUE AT5G42420.1|AT5G42420.2 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE94615.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853)|similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G21070.1); similar to Os07g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060103.1); similar to Os05g0215800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054935.1); similar to putative transmembrane protein [Oryza sativa] (GB:AAK50365.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 1.13851183096604 8.7051850626605 3.79580004500805e-06 0.0173392146055968 9.84103407101016 13.1954471666477 1.13851183096604 0.169098631436194 AT5G14640_at 6.30889798885276 6.83394845514951 7.07981157707623 6.91246842040826 7.69443261881278 7.3778933716349 7.99648058679392 8.15922422849912 6.0597244404307 6.57521363907894 6.59079948643749 7.11011670165027 7.36589557433865 7.43762733509173 5.3471309839745 6.83517272961866 6.57870358283467 6.63114236697504 6.7071104094537 0.178329126022213 0.180647433433341 0.175285747271452 0.179947607296697 0.189023200145026 0.204558224603677 0.198179962749424 0.193766857809455 0.185742014988637 0.178494094650981 0.175285747271452 0.186144427985833 0.191273431036076 0.181582261166401 0.189779155573441 0.183411482668968 0.197622441076100 0.175303463731818 0.177396213832812 5 5|0 -|/ 4719359 4720366 4719741 4719080 4722282 - gene protein_coding_gene TRUE TRUE AT5G14640.1 protein kinase family protein Identical to Shaggy-related protein kinase epsilon (EC 2.7.11.1) (ASK-epsilon) (ASK5) [Arabidopsis Thaliana] (GB:Q8VZD5;GB:Q9LYJ6); similar to ATSK11 (Arabidopsis thaliana SHAGGY-related kinase 11), protein kinase [Arabidopsis thaliana] (TAIR:AT5G26751.1); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.1); similar to shaggy-related protein kinase theta / ASK-theta (ASK8) [Arabidopsis thaliana] (TAIR:AT4G00720.1); similar to protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alfalfa (GB:S37642); similar to Glycogen synthase kinase-3 homolog MsK-3 (GB:P51139); similar to Shaggy-like kinase [Triticum aestivum] (GB:BAF36565.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.91964752363165 -8.70253042857508 3.80668118184383e-06 0.0173851129574808 9.83911730295034 13.8876062016216 -0.91964752363165 0.113527593812773 AT5G37540_at 4.18349742817358 4.45154979254652 5.77604837647551 5.81880981998379 5.99232341280147 5.83373054375473 3.25695850951139 3.99640803154564 3.57872566698858 3.04194594003727 5.21209233048483 4.94495176940941 4.64015189631733 5.07927055364331 5.10135104114744 5.38332138122152 5.13798825151244 5.42972832092852 3.16080408671355 0.217803340066284 0.215089427457837 0.212081174510836 0.213086375372688 0.219856932683727 0.208446142885867 0.221733516837475 0.210685244563988 0.215229588970459 0.231236859976513 0.205959694111405 0.209843821472118 0.206080615869409 0.212527208236296 0.211251186302462 0.206636369855799 0.215618510132963 0.209886083178058 0.212761841387293 5 5 + 14930836 14931283 14930993 14930065 14931661 + gene protein_coding_gene TRUE TRUE AT5G37540.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G66180.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Aspartic proteinase nepenthesin-1 precursor (Nepenthesin-I) (GB:Q766C3); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.01353203026650 8.68956175254836 3.86032647447366e-06 0.0176262506824467 9.82974134054952 9.1019651598472 1.01353203026650 0.139050031329862 AT5G58480_at 4.75435676932573 5.03561312226748 3.99657756128996 4.36561750725451 4.85752183748591 5.41634875276764 5.16785770759118 5.86460032502722 5.28366280332473 6.04526481263205 5.78246325974229 6.43067395390133 5.73335647745553 5.7781656537005 7.07012794473974 5.8307260344115 5.45458230384578 6.03471981686095 6.15713846243278 0.198224665466447 0.202317578806290 0.20490471020831 0.207412790315673 0.199049336998677 0.211261044424995 0.199640395299949 0.208443089669066 0.210444298078219 0.200722671915263 0.198130252153692 0.198527975815382 0.203923388560439 0.204971605576693 0.203156006085857 0.204861862748557 0.208696279957275 0.206044115535802 0.203910811874992 5 5 - 23658460 23659023 23658726.182 23658368 23660079 - gene protein_coding_gene TRUE TRUE AT5G58480.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 9 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 9) ((1->3)-beta-glucanase 9) (Beta- 1,3-endoglucanase 9) (Beta-1,3-glucanase 9) [Arabidopsis Thaliana] (GB:Q9FGH4); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G17180.1); similar to Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95444.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -1.15695148302035 -8.68047458322835 3.89840326211493e-06 0.0177962108915547 9.82315972219295 10.8538320095656 -1.15695148302035 0.174178759504417 AT5G62150_at 4.84536715145904 5.44051960897114 8.48765264110678 8.40447901189327 5.64317221039499 5.31267544071212 2.37882726677816 2.83070518915234 1.98296043993358 2.63143270828967 2.64820950722662 2.77021269789504 3.41772541841008 2.16974520177634 2.19312618911619 2.3689246233113 3.96013655551691 2.32157892515355 2.29213835258044 0.305893308669217 0.313862335185122 0.330181414192286 0.337081246795995 0.316851793661073 0.314168636676869 0.300231474067741 0.301946692164720 0.303330836150080 0.302896075583215 0.305635146252964 0.301542166985945 0.310086143526801 0.305606993342524 0.297751774223115 0.303014662531571 0.297751774223115 0.298622512129434 0.297751774223115 5 5 + 24975580 24975826 24975716.909 24975467 24975995 + gene protein_coding_gene TRUE TRUE AT5G62150.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G25433.1); similar to Os10g0524300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065106.1); similar to Putative dihydrodipicolinate reductase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15285.1); similar to OSJNBa0019K04.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD41658.3); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) 1.02419195043754 8.67712978659573 3.91252074300032e-06 0.0178567446710535 9.82073470042695 7.93461709342614 1.02419195043754 0.142131099853174 AT5G48960_at 5.05517251155744 4.60938974685363 5.07552150165884 4.68218207727578 5.85090132546986 5.53808176229185 2.98809423569017 2.38300698657511 2.18734011613381 3.4430410519503 5.18516627364588 6.01494626903967 5.18586095740865 4.82342255340701 6.12244245149177 4.61918393997715 4.89972012930659 4.57940667017942 3.17259535753084 0.228902158955136 0.220124640963265 0.220124640963265 0.224631385984281 0.220124640963265 0.234061014982609 0.221994153728739 0.227427930560236 0.224581123169369 0.225318379520431 0.220124640963265 0.222451450989358 0.220124640963265 0.228329183437212 0.241989865291110 0.220291435789037 0.226674686872377 0.225734766520894 0.228065807777050 5 5|0 +|/ 19869340 19870573 19869857 19866769 19870790 + gene protein_coding_gene TRUE TRUE AT5G48960.1 5' nucleotidase family protein similar to 5' nucleotidase family protein [Arabidopsis thaliana] (TAIR:AT1G75210.1); similar to HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase [Myxococcus xanthus DK 1622] (GB:YP_635204.1); similar to Os01g0250900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042597.1); contains InterPro domain HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase; (InterPro:IPR008380) 1.08037514902809 8.66395466798248 3.96867013177274e-06 0.018109041811279 9.81116963902915 8.57934085046925 1.08037514902809 0.156461403600914 AT5G15210_at 3.82886669796578 4.31275936341995 3.05002882283078 2.96847396551891 3.79408781051298 3.61312392509115 3.97680529264072 4.46748823214593 3.39808434130061 4.05592505793911 4.23624187752314 4.98395494297097 4.62640356301839 3.74157839308785 4.98488102808821 3.98948555555766 4.22792488732295 3.87327589180476 4.50553105619183 0.24539207401875 0.229672021930725 0.239005463722830 0.237697694875623 0.232229206074448 0.230329222750015 0.229672021930725 0.234372508548138 0.241515550826391 0.238236421535601 0.230870603420255 0.239277892337756 0.232628550826712 0.240156884944104 0.236568917131395 0.229672021930725 0.233913284848071 0.235745698943633 0.240645295573458 5 5 - 4937878 4938429 4938151 4937582 4939010 - gene protein_coding_gene TRUE TRUE AT5G15210.1 ATHB30/ZFHD3 (ZINC FINGER HOMEODOMAIN 3); DNA binding / transcription factor Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family. similar to ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G39760.1); similar to Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation re (GB:ABE90495.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) -0.953377529081273 -8.66066120331531 3.98284202283174e-06 0.0181697253081584 9.80877537748505 7.91119514004857 -0.953377529081273 0.124108186233967 AT5G51980_at 5.15960104165921 5.82827383328776 7.16884158417137 7.17208990065438 6.55266573712134 6.92623348527878 5.05860811606094 4.72226475115024 4.49140719305226 3.98150488482373 6.05492802709577 6.85899661379897 6.02353292093815 6.3822751734838 6.66993876318784 6.6387932842341 6.70422030742611 6.1364676147423 3.91991682779218 0.214164152628351 0.212471000808320 0.212537013210249 0.212867549156038 0.213855742788729 0.218496263512111 0.214398996047105 0.211726648789258 0.219883169786148 0.216246969076284 0.214663375742641 0.214836751219565 0.20962635948158 0.218568233243953 0.219905661169192 0.218374588696143 0.226021532594528 0.215005081736505 0.223237907511263 5 5|0 -|/ 21130887 21131896 21131435.5 21130591 21133423 - gene protein_coding_gene TRUE TRUE AT5G51980.1|AT5G51980.2 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative|nucleic acid binding similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to Os02g0677700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047729.1); similar to Os03g0145600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048950.1); similar to hypothetical protein DDBDRAFT_0187121 [Dictyostelium discoideum AX4] (GB:XP_637649.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 1.03194783493003 8.65443860305845 4.00976785501355e-06 0.0182885511867168 9.80424818668029 11.3558658345077 1.03194783493003 0.144768638311257 AT5G57320_at 3.13645826660481 2.99720008313852 2.65859565689045 2.8137997112976 2.33179833767193 2.70430201243602 3.10008568081812 3.18547668471282 3.35410346328245 2.93363983748152 3.29313754467234 3.17647182919303 2.54360747930914 2.62693986124465 3.31470791552289 3.06092406941382 2.92037183099706 3.07503234923227 3.45742931104597 0.236293474955354 0.235278112803288 0.241621666032333 0.243291780181446 0.237942087437818 0.233758446283213 0.233564624620029 0.230889502926518 0.229097412456827 0.226103027293322 0.236283219305147 0.227777587050992 0.244446875942751 0.22736605491033 0.226103027293322 0.226646299786103 0.234771004597257 0.237747870486099 0.231778482285057 5 5|0 +|/ 23233993 23234750 23234303.7 23229916 23234775 + gene protein_coding_gene TRUE TRUE AT5G57320.1 villin, putative similar to VLN3 (VILLIN 3), actin binding [Arabidopsis thaliana] (TAIR:AT3G57410.1); similar to VLN2 (VILLIN 2), actin binding [Arabidopsis thaliana] (TAIR:AT2G41740.1); similar to VLN4 (ARABIDOPSIS THALIANA VILLIN 4), actin binding [Arabidopsis thaliana] (TAIR:AT4G30160.1); similar to putative villin [Oryza sativa (japonica cultivar-group)] (GB:BAD05388.1); similar to actin filament bundling protein P-115-ABP [Lilium lon (GB:BAC77209.1); similar to Villin headpiece; Gelsolin re (GB:ABE83995.1); contains InterPro domain Gelsolin; (InterPro:IPR007122); contains InterPro domain Gelsolin region; (InterPro:IPR007123); contains InterPro domain Villin headpiece; (InterPro:IPR003128) -0.794457595104991 -8.64727117246786 4.0410265123243e-06 0.0184270808961988 9.79902787489848 5.99085954447202 -0.794457595104991 0.0753397710202428 AT5G64940_at 9.72802656083442 9.79074634209417 10.0716894904209 10.0753937607675 10.0612334340872 9.6154061014427 11.4517621562997 11.3360778096382 10.8773148065055 11.0238335031988 11.2781139593996 11.4812667127955 10.9428464527278 10.9489595184453 11.3042139776283 11.4149545079656 10.8999479631027 11.1962598649852 10.9928123951039 0.101098401187634 0.0953723445934043 0.108820670297234 0.0953723445934043 0.095409398182327 0.099276263853415 0.102627162989348 0.103517001277396 0.111996672517549 0.0953723445934043 0.0991627557511703 0.09617872836263 0.0953723445934043 0.104755934021071 0.106914951694359 0.0953723445934043 0.110928951362121 0.098171468674992 0.09711692822034 5 5|0 +|/ 25969446 25970471 25969873.5 25966199 25971049 + gene protein_coding_gene TRUE TRUE AT5G64940.1|AT5G64940.2 ATATH13 (ABC2 homolog 13) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins. similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT3G07700.2); similar to Os02g0575500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047212.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD33355.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) -0.808342185479129 -8.64574134759146 4.04773249941789e-06 0.0184536124648461 9.79791285181478 21.3402789258984 -0.808342185479129 0.0804457352770493 AT5G63880_at 7.12058010658604 7.47297044772221 8.64512672600989 8.27919765544594 8.77305983509725 8.47804988154539 5.91850875102101 5.49121796314972 5.25697280307328 5.35603880189023 7.4622524581539 7.12626618360175 7.23192767025962 7.52469402389324 7.12492396099483 6.89372525412794 7.31455475267566 7.22253899361877 5.25897624878135 0.217512426957542 0.215580423782023 0.22540529796152 0.228757513507062 0.223899840453773 0.220473408612932 0.216746227366966 0.226119629238186 0.223150333041728 0.221186307948325 0.218404831861249 0.214965012630969 0.220806893660076 0.215588278869617 0.217716100435415 0.214965012630969 0.232840989565013 0.225290981437731 0.237046640473752 5 5 + 25581759 25582457 25582149.182 25580964 25582724 + gene protein_coding_gene TRUE TRUE AT5G63880.1 SNF7 family protein similar to SNF7-related [Arabidopsis thaliana] (TAIR:AT5G09260.1); similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) (GB:Q503V0); similar to Os02g0596500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047322.1); similar to hypothetical protein LOC445397 [Danio rerio] (GB:NP_001003874.1); contains InterPro domain Snf7; (InterPro:IPR005024) 0.95749805209236 8.64426967198781 4.05419495926304e-06 0.0184790206243209 9.79683994761147 13.7864754358625 0.95749805209236 0.125711001490836 AT5G49910_at 9.3084899166682 9.39448844277583 9.7218098052019 9.66443814919669 9.49819309554544 9.19571489057564 10.5854339945718 10.4537146693412 9.75502726147646 10.3119367560997 10.2291712634347 10.6130278433216 10.3353293846299 9.78759916516476 10.7283146971476 10.2051411880395 10.1541777945298 10.1359074029230 10.0084645898585 0.101423461416164 0.0993023967105856 0.101749964974077 0.100256912431723 0.100188281823642 0.0995002246157028 0.0973763268599918 0.100544130260326 0.109395350900087 0.0991493919944712 0.102359872659272 0.0973763268599918 0.0979351482607572 0.103398963653601 0.0973763268599918 0.0985482465190064 0.100918455068043 0.103904855701999 0.0980499488969225 5 5 + 20322853 20323482 20323264 20320640 20323695 + gene protein_coding_gene TRUE TRUE AT5G49910.1 cpHSC70-2 (HEAT SHOCK PROTEIN 70-7); ATP binding / unfolded protein binding heat shock protein 70 (Hsc70-7); nuclear similar to MTHSC70-1 (mitochondrial heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G37910.1); similar to mtHSC70-2 (HEAT SHOCK PROTEIN 70), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G09590.1); similar to CPHSC70-1 (chloroplast heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G24280.1); similar to Heat shock protein Hsp70 [Medicago truncatula] (GB:ABE79560.1); similar to heat shock protein 70 [Cucumis sativus] (GB:CAA52149.1); similar to heat shock 70 protein [Spinacia oleracea] (GB:AAB91471.1); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Chaperone DnaK; (InterPro:IPR012725); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) -0.755172469253948 -8.63504433152813 4.09496083583195e-06 0.0186607365288862 9.79010845091534 19.8771486012565 -0.755172469253948 0.0598304556176069 AT5G57550_at 4.24138957810927 4.64810131266610 6.06467300925298 6.22043321320804 6.2580663862724 6.77613634777145 1.23164336618348 1.41260339144314 8.67404277446867 2.88629923049243 9.00276741183844 3.12226804664262 5.85581387173754 7.23901132148025 5.92470492138734 4.14734554078227 3.83133127272938 6.87141968214163 4.74850843458063 0.249134048438278 0.253365016341100 0.249021914418456 0.256645536661079 0.254006364182113 0.261210322566335 0.262054778030919 0.267899099573968 0.257469726775454 0.249021914418456 0.252450970662258 0.252428228946309 0.251287549227254 0.249021914418456 0.253485516265270 0.249021914418456 0.250347397693378 0.25439452572192 0.249021914418456 5 5 - 23322400 23322993 23322605.909 23322114 23323647 - gene protein_coding_gene TRUE TRUE AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds xyloglucan endotransglycosylase-related protein (XTR3) Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) (XTH25) [Arabidopsis Thaliana] (GB:Q38907;GB:Q9SEB0); similar to TCH4 (TOUCH 4), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G57560.1); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to xyloglucan endotransglycosylase-related protein (GB:AAB18364.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.939367034906854 8.62864595673227 4.1234951369026e-06 0.0187866438437283 9.78543374362826 10.1994389448332 0.939367034906854 0.121239421327477 AT5G40760_at 6.70715315960987 6.85573863825258 8.46990836496347 8.48296561889765 8.26347487338409 8.00633084551519 5.97697152890657 5.72994097677145 6.75039186236735 6.38478838425448 8.29722521900413 8.4045014921467 7.31293025935274 8.20820434722191 8.3380658197217 8.23397124540033 7.49426144693206 8.50385290472529 6.47273057148115 0.185201752084199 0.186345166878676 0.182543536844801 0.184952056992634 0.181641579715868 0.188485265725514 0.186838198733254 0.199361798598374 0.209286512073425 0.197925542982333 0.181641579715868 0.185913266727839 0.185965918164259 0.185777605816179 0.189726244809832 0.185743828081757 0.193551021163746 0.190709074801458 0.189997204745776 5 5 + 16330526 16331747 16331196.364 16327976 16332002 + gene protein_coding_gene TRUE TRUE AT5G40760.1 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6); glucose-6-phosphate 1-dehydrogenase Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. Identical to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 (EC 1.1.1.49) (G6PD6) (G6PDH6) (ACG12) [Arabidopsis Thaliana] (GB:Q9FJI5;GB:Q9SUJ9); similar to G6PD5 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5) [Arabidopsis thaliana] (TAIR:AT3G27300.3); similar to glucose-6-phosphate 1-dehydrogenase cytoplasmic isoform-like [Solanum tuberosum] (GB:ABB55386.1); similar to glucose-6-phosphate dehydrogenase [Populus suaveolens] (GB:AAR26303.3); similar to Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (G6PD) (GB:P37830); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) 0.77071859664578 8.62423671366692 4.1432839056613e-06 0.0188726581902872 9.78220946115412 14.6291089330447 0.77071859664578 0.0668885448249116 AT5G48500_at 3.23859201627626 2.86716392701971 3.62709871081101 3.87079496466198 4.23630793193743 3.97911202540287 2.446296686645 2.76476429980079 2.22042311500091 2.64989671020496 4.19316508392683 4.80241552644792 4.71521089514823 3.89098359263775 4.58491255380931 3.82810426931346 3.93063985915024 4.12068133195918 2.59484478706392 0.233975586915089 0.225701652506659 0.231676985949219 0.228607687847712 0.225701652506659 0.235649384937507 0.228530933539081 0.236038896319738 0.233273806959424 0.230490732113502 0.232107529113563 0.226250174519916 0.231868517396160 0.229142033098224 0.227846484712088 0.225701652506659 0.240407395454523 0.228376856463488 0.225701652506659 5 5|0 +|/ 19670583 19671218 19670798.7 19670217 19671470 + gene protein_coding_gene TRUE TRUE AT5G48500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10930.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79320.1) 0.880473376807269 8.6227987738797 4.14975961750834e-06 0.0188980052981330 9.78115745650347 6.7520924918889 0.880473376807269 0.104539634539992 AT5G06560_at 7.04471151727795 7.34962958398554 8.37943876950716 8.61907917905825 8.99040154963131 8.91440419190516 6.45991160162328 6.11485633337896 6.86363248097889 5.79128779769219 8.20719730560175 8.2559912950821 8.05669474570448 8.16140497325702 7.59623887442842 8.13941693200425 7.81797128524026 7.92817078856279 6.4408715215578 0.215182116977851 0.215963599312598 0.208270502894419 0.211452062366376 0.213610692183196 0.21373462629836 0.204936324066883 0.212152672400495 0.222836975224354 0.221712651749211 0.21431749048455 0.206778112709442 0.205003627569544 0.216106845276964 0.207785828076706 0.207489460828888 0.217315571215359 0.222706453891166 0.221785695244272 5 5 - 2003683 2004546 2004209.182 2003305 2006189 - gene protein_coding_gene TRUE TRUE AT5G06560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11850.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA98276.1); similar to Os11g0575900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068136.1); similar to Os03g0650800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050787.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.832631249977333 8.58284302080567 4.33415333640115e-06 0.0197334001406344 9.75182630077347 14.9268789449933 0.832631249977333 0.0907904356786884 AT5G15390_at 6.49905476288388 6.61565217683337 6.48689181836087 6.79342757607339 7.1117551558193 6.75990758312441 6.92375552411477 6.81820772031838 6.5837478740805 6.78108382698019 6.94205908440843 7.05907973054024 6.87490535830162 7.04908636595184 7.65988439152862 6.87311427315325 6.78365924471125 6.85675367341556 6.52076431679685 0.163749583844008 0.164004502446177 0.17850570161752 0.171370569583254 0.166360709691867 0.173097931462957 0.169551505199043 0.172612583476657 0.17820538805792 0.166906421957842 0.165743780829258 0.162599393927747 0.169676575644425 0.172256051890354 0.16805635516592 0.162599393927747 0.175456978860145 0.164803429325692 0.168321560967859 5 5|0 +|/ 4995894 4997203 4996476.5 4995148 4997406 + gene protein_coding_gene TRUE TRUE AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein similar to tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] (TAIR:AT2G19870.1); similar to putative rRNA methylase [Oryza sativa (japonica cultivar-group)] (GB:BAC83213.1); contains InterPro domain tRNA/rRNA methyltransferase, SpoU; (InterPro:IPR001537) -0.81263635425287 -8.54676243437115 4.50829851022125e-06 0.0205217748185271 9.72517441474373 13.5715064252930 -0.81263635425287 0.085218867748767 AT5G40490_at 5.24120705894303 4.99125045705324 5.36864818304556 5.46833185486284 5.0328075998406 5.4554149528224 5.32003160816087 5.11812332283802 5.82023538702715 5.6911498684536 5.95560338241889 5.54428588087892 6.06612061966543 6.14935556832115 5.93313215863226 5.72450826693033 5.98631516275586 5.97532543223686 5.82289321215563 0.154096281123081 0.160401044165261 0.154946437835830 0.151798472152316 0.152255526373664 0.156999669547168 0.152831976267368 0.161556486631728 0.152284953182605 0.152120098514986 0.152232976761082 0.155773057507424 0.163898230362485 0.155526755201617 0.151249333019922 0.153453977548115 0.152672131280639 0.163545065819965 0.152626641602455 5 5 + 16244083 16244624 16244338.091 16242604 16244937 + gene protein_coding_gene TRUE TRUE AT5G40490.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G13224.2); similar to Os02g0221500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046322.1); similar to putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa (japonica cultivar-group)] (GB:BAD17623.1); similar to Os08g0320100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061525.1); contains InterPro domain Eggshell protein; (InterPro:IPR002952); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.837121019213673 -8.54454651414674 4.51923787180876e-06 0.0205670515546017 9.72353242545522 11.0969386954585 -0.837121019213673 0.093478207115362 AT5G65260_at 9.10676217083908 9.25338809560418 9.41302847971868 9.52147596618192 9.64563152075496 9.44390897780066 9.5634760307591 9.55758616921186 9.25373232542766 9.34634728098452 9.11600366495641 9.03719797727051 9.25310247859719 9.09288248903715 9.22645822993683 9.22546162753573 9.30645185071676 9.27447912270954 9.3066377101957 0.0796145700067761 0.0820608207454303 0.0802167454989924 0.0822302758569333 0.0795062631432688 0.0810945259148913 0.0838006181849101 0.0833483599016052 0.084370961499814 0.0802361560205336 0.079667232213489 0.080452357788385 0.078879229929266 0.0841563629127794 0.0838661688383043 0.0836095265126072 0.078879229929266 0.0814844665517662 0.0805846082516229 5 5|0 -|/ 26097733 26100114 26098432.2 26097457 26100243 - gene protein_coding_gene TRUE TRUE AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G10350.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.720699254858032 -8.53353097395762 4.57404647320706e-06 0.0208119114530921 9.71536109377862 18.6850290691743 -0.720699254858032 0.0470717255314668 AT5G42940_at 6.10358497050117 6.35741257972927 7.43869938730709 7.64954686545851 7.64932757873352 7.74567431750131 5.77251742626522 5.7858861338041 4.6632821578715 5.10044695076354 7.2743622229249 7.1132465974316 7.51559676299488 7.3346778246931 6.39576571745945 7.67204847887596 7.66275585306103 5.74965811647399 5.60632995596853 0.192731109586741 0.194305178803217 0.198108483483572 0.195444016877653 0.192547093745282 0.202464888168329 0.199350461400757 0.193566520372704 0.195276293528807 0.198817586124600 0.203967328164066 0.194456946227457 0.191947456866693 0.196881024567577 0.200915551815556 0.195470516389304 0.208901116620667 0.196002725397229 0.195206430267777 5 5|0 -|/ 17233896 17234877 17234364.111 17233558 17237718 - gene protein_coding_gene TRUE TRUE AT5G42940.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G45180.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE89604.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.744879189635812 8.52481779430029 4.61790907478416e-06 0.0210068683811932 9.70888719833105 12.9193896415495 0.744879189635812 0.0595334531003058 AT5G09570_at 3.20603284531156 3.32645916181752 5.37143151472474 5.35602128134933 4.88680214192115 5.00678648507662 2.90998509558316 2.87566871585024 3.03524146000271 3.14156279017507 3.31082646298783 3.27567686332884 3.64553767515565 3.56696121077314 3.47616797296259 3.79957129834967 4.58008016951459 3.29894241755795 2.75968034870337 0.265975551851216 0.258733644321931 0.283346716405404 0.29443566405274 0.27082502106759 0.300003209499167 0.26953709305254 0.268110322364801 0.266218565684203 0.264365709998568 0.258733644321931 0.261586093336137 0.264420461987342 0.262696928542943 0.258733644321931 0.268630310101066 0.272224965342052 0.2600971996593 0.264410161712087 5 5|0 +|/ 2971017 2971941 2971447.7 2970670 2972182 + gene protein_coding_gene TRUE TRUE AT5G09570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64400.1); similar to Os03g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050926.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1); contains InterPro domain CHCH; (InterPro:IPR010625) 0.69352494988868 8.51210364402773 4.6827315247324e-06 0.0212970629744829 9.69942397952113 7.4164227594322 0.69352494988868 0.0301303176272923 AT5G61460_at 2.3771929660155 2.91012953038014 4.29262561814394 3.77329580126464 4.03721101421391 3.85753898667227 2.26991262631492 2.15426239538966 1.44842178352371 2.27070583910763 2.35352221421458 2.97296208531954 3.44690139505205 2.84760567465731 2.71402838999897 3.31141769117553 3.48634761544447 2.83464748961558 1.87722918676817 0.236265708535322 0.233272292132377 0.253915542260907 0.235402526690240 0.236466097253482 0.241182117914017 0.236299113452486 0.247974645521998 0.246200308037039 0.239767617646228 0.233272292132377 0.235494703318436 0.238482051854210 0.237263039572558 0.236919102145780 0.234743415632424 0.245785423261881 0.239199561109758 0.240261861105384 5 5|0 -|/ 24731979 24732820 24732339.778 24731302 24739166 - gene protein_coding_gene TRUE TRUE AT5G61460.1 MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding Encodes a protein closely related to the structural maintenance of chromosomes (SMC) family involved in structural changes in chromosomes. similar to structural maintenance of chromosomes (SMC) family protein [Arabidopsis thaliana] (TAIR:AT5G07660.1); similar to SMC6 protein [Oryza sativa] (GB:CAD59413.1); similar to Os09g0121000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062596.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.972990452802017 8.50725121700409 4.70773043044127e-06 0.0214060502672165 9.69580708682123 5.63971178691667 0.972990452802017 0.133978497554787 AT5G06320_at 10.7279509444320 10.8008591776828 11.7130835807083 11.7886985469910 11.2605469183813 10.9320945962667 9.31311364432494 9.39992218349419 9.7766878522363 8.8854473730496 10.6083389721059 10.6607571582236 10.4043317713277 10.8750568943302 10.34345469388 9.84934592705998 10.2826460421505 10.4689192128312 8.38548280167924 0.117470304995164 0.111291089952474 0.117855993340192 0.116757831191477 0.118410005269628 0.115835906158859 0.123774387441264 0.115003964937990 0.130000047032069 0.136839202094687 0.111290580656010 0.111290580656010 0.111532430284215 0.112001918137541 0.114476996587238 0.115490238711292 0.115667800615897 0.115790609656628 0.146864222625859 5 5 - 1931028 1931574 1931348.455 1930794 1931769 - gene protein_coding_gene TRUE TRUE AT5G06320.1 NHL3 (NDR1/HIN1-like 3) encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane. similar to NHL2 (NDR1/HIN1-like 2) [Arabidopsis thaliana] (TAIR:AT3G11650.1); similar to hin1 like protein [Capsicum chinense] (GB:BAD11071.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.74716562170689 8.50006803160517 4.74500253675746e-06 0.0215707815320994 9.69044761450664 20.468273203857 0.74716562170689 0.0615378792927487 AT5G42380_at 1.85070615718265 1.75724928247613 4.11877731931793 4.14002434046678 2.27752268260896 2.20322442999418 1.10268169254154 0.552841493685976 0.97828460567765 1.19195793549142 1.07050404977282 1.29255508719501 1.23824149000010 1.2235380168844 1.10173655149735 0.94854152196986 0.890322831703776 1.56314560595213 1.12008552323777 0.249852113278728 0.249105038760229 0.279725357406011 0.280213607823863 0.250524349423122 0.258299694582905 0.243549274653553 0.243549274653553 0.251639783915625 0.243862788121083 0.246496187583480 0.243549274653553 0.247002553372912 0.24745028364453 0.243549274653553 0.243549274653553 0.246907908616717 0.246364462965391 0.243748215068673 5 5 - 16960009 16960500 16960221.364 16959804 16960594 - gene protein_coding_gene TRUE TRUE AT5G42380.1 calmodulin-related protein, putative similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G76650.1); similar to regulator of gene silencing [Lycopersicon esculentum] (GB:AAT65969.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.843701277202074 8.48626050838613 4.81754697051849e-06 0.0218957509810065 9.6801278954655 3.38180300770470 0.843701277202074 0.0974391654030028 AT5G02190_at 2.68757861839848 2.70168712843024 2.12776590271108 1.78606965071140 3.19149989187585 2.72980711241818 2.22548714507146 2.16552554144275 1.67075517830943 1.65782928064798 3.49934054345955 4.15305825386099 4.58277758523224 3.83648481597066 4.56901881832885 4.06662593982338 3.22495484769751 3.99560471459656 1.68145636755267 0.250465646589806 0.247867567227405 0.263377401248310 0.257444832529791 0.247867567227405 0.253320761328311 0.250094714799183 0.250143037523614 0.269476477764562 0.256107526413778 0.248937553306472 0.254710701181463 0.254063951301075 0.25441336650268 0.252366479693967 0.247867567227405 0.259477023650092 0.250329051297423 0.252264854667216 5 5 + 436083 436481 436273.364 435209 436895 + gene protein_coding_gene TRUE TRUE AT5G02190.1 PCS1 (PROMOTION OF CELL SURVIVAL1); aspartic-type endopeptidase/ peptidase encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT2G39710.1); similar to Os01g0844500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044781.1); similar to Peptidase aspartic, catalytic [Medicago truncatula] (GB:ABE83471.1); similar to Os03g0271900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049694.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.85049521070561 8.47402509581143 4.88283511666002e-06 0.0221876027701031 9.67096363068434 5.28242602323639 0.85049521070561 0.099969740796757 AT5G56350_at 9.23231866477334 9.49676504141888 10.4991515014252 10.5559559950990 10.0438839895789 9.71967547193246 8.91622441083005 8.99084955431069 7.84846049729013 7.16634815518553 9.41430084769842 9.3483837436941 9.424174672101 9.4532866729291 9.28320406698446 9.4413777898279 8.97309413918639 9.30837618490429 6.81795338623319 0.142220403883296 0.136803570733022 0.140184464200838 0.141247057986303 0.139226196641556 0.146319585857013 0.13741068755586 0.135132869467083 0.154392184080425 0.167188487109168 0.134052930467346 0.133163668115722 0.133163668115722 0.138645416197455 0.138606445331161 0.133163668115722 0.158066612855808 0.137796396879270 0.18315449490561 5 5 - 22837513 22837938 22837783.545 22837232 22839992 - gene protein_coding_gene TRUE TRUE AT5G56350.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:CAI53675.1); similar to Pyruvate kinase [Medicago truncatula] (GB:ABE78303.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42954); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 0.774097830016368 8.4580200350368 4.96968734472704e-06 0.0225772896070949 9.65894813682113 17.9860341341221 0.774097830016368 0.0741996389101723 AT5G54690_at 1.35127451883811 1.30805378665757 2.58971429170221 2.72504570672239 2.60560749963170 1.9770821251612 1.36523270384120 1.71057994843288 1.79139016972969 1.5042575423175 2.88861648581084 2.69143093401751 2.49178784295883 2.66247286730229 2.69009872954419 2.62602908638756 4.13712227768113 2.94055424691008 1.72838810463074 0.215258923935956 0.204050620398056 0.223099987277625 0.213030016439896 0.208965231246557 0.20806800296954 0.214017537868418 0.20944435524213 0.225363269774312 0.204040903288631 0.206917345016272 0.208058636426172 0.21002265745128 0.210513595619834 0.206731148492398 0.207154833218233 0.223125464792920 0.211115084251305 0.213381518385818 5 5 - 22236729 22237253 22236927.818 22236450 22239066 - gene protein_coding_gene TRUE TRUE AT5G54690.1 GAUT12/IRX8/LGT6 (GALACTURONOSYLTRANSFERASE 12); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to Os12g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067123.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94604.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 0.938286240628056 8.44437358610454 5.04506126103908e-06 0.0229146682476395 9.64867839647009 4.23692015481634 0.938286240628056 0.126518404115993 AT5G49520_at 4.41393781778946 3.41631935304103 5.30486285278042 4.76491038126646 6.29294920841367 6.60585179419366 2.01275960260860 2.08006008752331 2.02556020946246 1.85185442026313 2.77102738081343 3.05435250106600 2.19280156781766 3.19156197420502 3.12495198772326 2.17814100522565 2.55535602117903 3.45599759389158 2.01925253467003 0.285621181528416 0.271918225464456 0.289671834720044 0.284898404811591 0.288708431391928 0.295676998311346 0.271918225464456 0.273818553307230 0.283831638821298 0.286362109103673 0.271918225464456 0.277813265830376 0.278824730788350 0.282292951027735 0.283279246133908 0.282178705638740 0.273054430309893 0.285825349462135 0.290397346056500 5 0|5 /|+ 20109621 20110025 20109840.5 20108002 20110572 + gene protein_coding_gene TRUE TRUE AT5G49520.1 WRKY48 (WRKY DNA-binding protein 48); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 48 (WRKY DNA-binding protein 48) (WRKY48) [Arabidopsis Thaliana] (GB:Q9FGZ4); similar to WRKY23 (WRKY DNA-binding protein 23), transcription factor [Arabidopsis thaliana] (TAIR:AT2G47260.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE87685.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 1.25166087533533 8.43424651001472 5.10179582613324e-06 0.0231672548464710 9.64104232120408 6.75199612492978 1.25166087533533 0.20397182164599 AT5G56040_at 5.21569423074029 5.64148131211401 5.02176612233755 5.18276480357292 5.58020271609667 5.40715613268516 5.60516272294137 5.70014899749562 6.2374992459323 5.71043342829916 7.01178184509772 6.83976868770246 6.59478792958319 7.12561874424019 6.82038313744578 7.32461017138885 5.32917760900078 6.63945314119174 6.14918938249857 0.181114869095208 0.168576062313094 0.167367661047873 0.171914305032006 0.169314072565507 0.178725878777591 0.180272014963882 0.171247923773079 0.186432721557461 0.178472401242634 0.172592487498846 0.167251944858954 0.170113553341155 0.182122016933449 0.171253616163910 0.172472208612439 0.177853339375770 0.179293529642832 0.17062852148058 5 5|0 +|/ 22714949 22715601 22715326.3 22712104 22715854 + gene protein_coding_gene TRUE TRUE AT5G56040.1|AT5G56040.2 leucine-rich repeat protein kinase, putative|ATP binding / protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to putative Receptor-like protein kinase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD46328.1); similar to CLAVATA-like kinase [Triticum aestivum] (GB:CAJ19346.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210)|similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to putative Receptor-like protein kinase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD46328.1); similar to CLAVATA-like kinase [Triticum aestivum] (GB:CAJ19346.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.803142956818253 -8.42748588237044 5.14005468729268e-06 0.0233358482803088 9.63593757251571 11.7908329683061 -0.803142956818253 0.085864193790258 AT5G51100_at 5.39206167474037 5.13208450482073 4.40731896752903 4.79022460032768 4.59108184555295 4.70085691031477 4.741741236471 4.8030772211287 4.07166830594325 4.74174427079001 4.56791159322117 5.12992520073837 5.00291514394512 5.07983701019196 5.6597423948161 4.84121006883794 5.09049327699713 4.82978029631281 4.47247751216544 0.261411880509712 0.262564644090411 0.262702756411207 0.266953795432042 0.259327094057552 0.272468738050567 0.267468782506535 0.266802467645117 0.271285765456294 0.265875353957042 0.261058361060409 0.262712638300758 0.26287963856359 0.269597607068549 0.263889008667860 0.259327094057552 0.265667471037395 0.270220187190903 0.262961708417515 5 5|0 -|/ 20790980 20791874 20791329.429 20790522 20792927 - gene protein_coding_gene TRUE TRUE AT5G51100.1 FSD2 (FE SUPEROXIDE DISMUTASE 2); iron superoxide dismutase Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B. similar to FSD1 (FE SUPEROXIDE DISMUTASE 1), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT4G25100.2); similar to Fe-superoxide dismutase 1 precursor [Lotus corniculatus var. japonicus] (GB:AAS92464.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) -0.793108432133964 -8.40733158937286 5.2559630306106e-06 0.0238568161959415 9.62068604300104 9.54673432149339 -0.793108432133964 0.082997262194525 AT5G10160_at 4.64658927338317 4.90216683526464 5.67213383988701 5.27500354887861 6.45712067152491 6.58575562109095 5.25136589434146 5.28844206496757 4.78207575486534 4.87749840795299 7.6984728526271 7.90899468769057 6.41243712931673 7.66914558740339 8.12225412678647 6.83811889666964 6.43337874467452 7.38211114435129 4.36015945860571 0.272140739650158 0.266964765683602 0.280794999232995 0.262991014057846 0.259986136805666 0.268076379743982 0.263184077946685 0.258051516443122 0.271128241322820 0.268701104947429 0.262701594404445 0.261725982995666 0.266817249416378 0.260823765951933 0.27238245843097 0.258666942225785 0.265792865114497 0.260710368226042 0.263775077003661 5 5|0 +|/ 3185922 3187124 3186258.5 3185747 3187313 + gene protein_coding_gene TRUE TRUE AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative similar to beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] (TAIR:AT2G22230.1); similar to 4D11_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67531.1); similar to putative 3-keto-acyl-ACP dehydratase [Brassica napus] (GB:AAK60545.1); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; (InterPro:IPR010084); contains InterPro domain Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; (InterPro:IPR013114) 0.797377809734766 8.3943935910963 5.33185848925008e-06 0.0241959738242169 9.61086876398869 11.5005015619996 0.797377809734766 0.0849474475226602 AT5G43740_at 4.74040978449902 4.88271377534589 4.80839806028489 4.72949013117467 4.43427538968967 4.56876748862596 4.3250901640055 5.05017398516751 5.29147921893308 5.17329333995309 5.36668514118716 5.69015782490704 5.52726693053451 5.72478518438026 4.83721929043522 5.35210176049922 5.22943579514632 4.86514213889731 5.27845560382296 0.220766709373792 0.220415654165670 0.215406139460347 0.215682744874020 0.223265374740566 0.222761240348736 0.212099258558839 0.212099258558839 0.22250501221661 0.220868653975177 0.214908157833881 0.220557201168427 0.221824056573742 0.214074983853292 0.222130088101586 0.216409971460614 0.2231931728339 0.222790718846454 0.222488470993911 5 5 + 17585298 17585776 17585583.091 17581965 17586029 + gene protein_coding_gene TRUE TRUE AT5G43740.1|AT5G43740.2 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g43740 [Arabidopsis Thaliana] (GB:Q9FG90); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43730.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G15890.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.94506125581635 -8.36900916177827 5.48423353831017e-06 0.0248819675633133 9.5915465731017 9.97833583692485 -0.94506125581635 0.130689108410693 AT5G14550_at 4.89881359277148 5.14637369786428 5.805992320361 5.60514219910008 6.63646694593105 5.92250858130188 2.82940250994554 2.70258016962930 2.55716584735378 2.99183652034803 3.72181929768414 4.07443948241767 3.63551668642809 4.16887223820355 3.42267769855396 3.91045513013366 4.25620168817877 3.95415641013116 2.07616327444800 0.276318756038878 0.277969839234993 0.291041884711454 0.290023798966730 0.273900717956792 0.280612901329793 0.270347704399976 0.266716035894177 0.282917989156607 0.269050279516802 0.266716035894177 0.268578920303948 0.271306933518440 0.270791975080568 0.26879336082471 0.270841563786543 0.266716035894177 0.266873651927457 0.280510669437934 5 5|0 -|/ 4691492 4692781 4691997.6 4691013 4694058 - gene protein_coding_gene TRUE TRUE AT5G14550.1|AT5G14550.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62305.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11940.1); similar to Os01g0695200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043958.1); similar to Protein of unknown function DUF266, plant [Medicago truncatula] (GB:ABD28621.1); similar to Os05g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054766.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) 0.964035217403203 8.3284079092409 5.73783133256718e-06 0.0260268029245247 9.56047387610395 8.16077960695456 0.964035217403203 0.137079310382525 AT5G54860_at 6.97533113727339 7.21896949303622 8.47499579687067 8.60165299171545 6.76651668125757 6.40920730862772 3.95671516258128 3.63912129424491 4.56776521029005 2.91908224706350 5.30527780996386 5.71085720297192 4.28919229109965 5.0799323698322 5.01689438738387 4.37155641076217 4.54756705561912 5.49931581555780 3.04010771532351 0.231263899080984 0.235596962692804 0.243428119221824 0.238748440708856 0.232906934566450 0.250000712290591 0.229052220431777 0.230017499895270 0.246070053511171 0.234137432044665 0.237795269646504 0.233665037290518 0.233156487452256 0.238693554316715 0.252453875749648 0.22875658562672 0.242995867770654 0.234798464166371 0.22875658562672 5 5|0 +|/ 22303509 22304184 22303820.4 22301807 22304432 + gene protein_coding_gene TRUE TRUE AT5G54860.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G64890.1); similar to Biopterin transport-related protein BT1 [Crocosphaera watsonii WH 8501] (GB:ZP_00518975.1); similar to Os01g0243200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042562.1); similar to Os03g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051544.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 0.820911668252575 8.31965198667283 5.79416725548818e-06 0.0262765485036389 9.55374567923597 10.7485933459298 0.820911668252575 0.0954059553215766 AT5G07030_at 0.85138363794017 0.890468908659645 0.0835576157425176 0.166557902087142 -0.153284870587483 -0.0431482066966494 0.0521478358907214 0.539489938133455 0.80058312051375 0.0760053630992385 2.09678039307490 6.71560806766936 0.973244369241952 2.09348811883053 6.90002205502164 1.83785134407914 0.5288308339437 2.22889120673395 0.982808706149551 0.254690323400762 0.252907094389295 0.260921054834099 0.257053711405115 0.257239689262423 0.252907094389295 0.253485855578750 0.262078564399250 0.26126496282091 0.268724135573354 0.266640023096071 0.302466190629815 0.258054593013794 0.262590275856529 0.303008308827384 0.256684246529034 0.256677195703127 0.271522251831140 0.257114607285638 5 5|0 -|/ 2183627 2184405 2184002.7 2183361 2185973 - gene protein_coding_gene TRUE TRUE AT5G07030.1 pepsin A similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G54400.1); similar to Peptidase A1, pepsin [Medicago truncatula] (GB:ABE83791.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.798135266949747 8.3136761993509 5.83295903491557e-06 0.0264466362643072 9.54914823311435 2.06921590106048 0.798135266949747 0.0879092338726094 AT5G48930_at 9.59790790514068 9.90780176034855 9.88259103204078 9.98197478376742 10.2053445441379 10.0365383073134 10.8953291605735 11.0725042562121 11.5248248967783 11.2700583145490 11.6367022277444 11.6587107983365 11.2835364036770 11.5221005405797 11.4669855826188 11.4230085617312 10.8595557835438 11.4664038650623 11.3490001779575 0.0720779809982453 0.0668019661255685 0.0694774255796868 0.0670472798610189 0.0661056994546333 0.067006097510808 0.0665600445724625 0.069271189889387 0.0732458065144806 0.0668871259489025 0.067943270084428 0.0652883203673214 0.0669987197112543 0.0695180148144503 0.0681124462555384 0.0652883203673214 0.0737383759224322 0.0674674404859048 0.0683375705249597 5 5 - 19853911 19854428 19854153.182 19853525 19855388 - gene protein_coding_gene TRUE TRUE AT5G48930.1 transferase family protein At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G57840.1); similar to hydroxycinnamoyl transferase [Nicotiana tabacum] (GB:CAD47830.1); similar to Alcohol acyl-transferase [Prunus mume] (GB:BAE48668.1); similar to hydroxycinnamoyl transferase [Coffea arabica] (GB:CAJ40778.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.750817549011476 -8.30553958105337 5.88623012665316e-06 0.0266822811641188 9.54288111059745 21.5954589354451 -0.750817549011476 0.0704648951208259 AT5G23390_at 6.95283678446464 6.94059304186366 8.00876426304853 8.22024212524298 8.61605577789374 8.31957288805893 6.20862037963355 6.3286430329266 5.3968800031779 5.63402119798165 7.27629117689165 7.47768180710168 7.35192264369252 7.51543868365472 7.57896205762104 7.79380236278283 7.49019658710973 7.04300996288915 5.70873590113244 0.2187174645984 0.216591284326443 0.225606077623956 0.227235674004202 0.219866599817181 0.217843199360451 0.215044752640058 0.231689889032444 0.222160725738876 0.214427480902109 0.219700660621759 0.212607986457047 0.217644539441088 0.218967005186391 0.224661327981561 0.212492279910526 0.223892670902429 0.219213207269982 0.217923869166640 5 5|0 -|/ 7870748 7871499 7871105.3 7870516 7874508 - gene protein_coding_gene TRUE TRUE AT5G23390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os04g0677400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054264.1); similar to Os02g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047529.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25093.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Protein of unknown function DUF639; (InterPro:IPR006927) 0.738725705228018 8.27924889022734 6.06198554228406e-06 0.0274729184776313 9.52257377392996 13.9598121337992 0.738725705228018 0.066390846194707 AT5G47880_at 7.68006870404752 7.72200552679477 9.34093220951017 9.42381259814596 9.44000913559088 9.07275498501991 8.36073139686576 8.23948963378597 6.0313599643264 7.16424257731517 8.45868595907441 8.44879225466626 8.75192345663547 8.5660083232793 8.4830539775727 8.80828267680363 8.85941391010284 8.03475403260206 6.55546134803669 0.166641598349326 0.162216981632846 0.167025534004905 0.166356685434261 0.163658984118273 0.174958485950619 0.163268715824844 0.163692224720801 0.177599282833830 0.171550038646414 0.170130621533318 0.169005927810831 0.167636349121917 0.160623458130889 0.165351433792432 0.160623458130889 0.169017508835204 0.182399721202978 0.176900644799143 5 5 - 19403812 19404351 19404037.182 19403326 19405788 - gene protein_coding_gene TRUE TRUE AT5G47880.1|AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones. Identical to Eukaryotic peptide chain release factor subunit 1-1 (eRF1-1) (Eukaryotic release factor 1-1) (Omnipotent suppressor protein 1 homolog 1) (SUP1 homolog 1) (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to eukaryotic release factor 1 homolog (GB:AAA91169.1); similar to eukaryotic peptide chain release factor subunit 1-3-like protein [Solanum tuberosum] (GB:ABC01885.1); similar to eukaryotic peptide chain release factor subunit 1-3-like [Solanum tuberosum] (GB:ABB87106.1); contains InterPro domain eRF1 domain 2; (InterPro:IPR005141); contains InterPro domain eRF1 domain 3; (InterPro:IPR005142); contains InterPro domain eRF1 domain 1; (InterPro:IPR005140); contains InterPro domain Peptide chain release factor eRF/aRF subunit 1; (InterPro:IPR004403) 0.744392210224048 8.27812832276126 6.06960166053324e-06 0.0275013651238761 9.52170628254566 16.2275016672542 0.744392210224048 0.0688320508426703 AT5G61910_at 3.87875002946712 4.07743601692265 5.38233648963615 5.05055917243295 5.23726119503533 5.47803178057737 3.48575841946356 3.2517874543068 3.28311175322918 2.35950225343721 3.91018400517403 4.23628534217704 4.57039955659671 4.45960160739231 3.92420028138589 4.2559620438154 3.97914644465148 3.64280391720727 2.42396526366789 0.227846925375577 0.220225336859870 0.233450479292967 0.226539578631541 0.223548974945464 0.241555647984629 0.218507463344616 0.219054566466304 0.240511045310899 0.231861769310316 0.222172389474324 0.223030693700963 0.222647235626431 0.222347084073712 0.218514536057847 0.228722040472572 0.233995289798255 0.223129175261728 0.225227730494297 5 5 - 24878342 24878805 24878548.182 24877104 24881394 - gene protein_coding_gene TRUE TRUE AT5G61910.1|AT5G61910.2|AT5G61910.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32910.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94008.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22502.1); similar to Os06g0227200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057206.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain SUBFAMILY NOT NAMED (PTHR23230:SF1); contains domain no description (SM00767) 0.79502527809695 8.25991984625317 6.1948197568374e-06 0.0280625334984734 9.50758774991267 7.8858313980193 0.79502527809695 0.0886244676763847 AT5G42050_at 11.3097747624312 11.4238175906055 12.7455438766670 12.7277234309428 12.2803894456281 12.1043491060794 11.1291482037018 10.8499218328096 9.4459946438331 9.3440923093401 10.5459947601843 10.5289227551990 10.5943582136163 10.5090927356846 10.3531544615031 10.5314873168939 11.0188629492702 10.6286193579861 8.95511947913578 0.0802998280224706 0.0776380532672733 0.0782764752371923 0.07818502347009 0.0814155042027543 0.079476589262566 0.0780746931461966 0.08078514940947 0.0852064647840549 0.0824213768725288 0.0803073415864299 0.0776380532672733 0.0794944353727759 0.0789184938663244 0.0790108546249744 0.0783120961216449 0.080708660249688 0.0781873967085901 0.08934304647656 5 5|0 +|/ 16833460 16834005 16833742.25 16832717 16834529 + gene protein_coding_gene TRUE TRUE AT5G42050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27090.1); similar to N-rich protein [Glycine max] (GB:CAI44933.1); contains domain KELCH-RELATED PROTEINS (PTHR23230); contains domain no description (SM00767); contains domain gb def: Hypothetical protein At5g42050 (PTHR23230:SF16) 0.722794058765264 8.24803782513548 6.27803605522012e-06 0.0284332252940919 9.49835187086573 21.7399403875558 0.722794058765264 0.0605149425499267 AT5G65080_at 0.864435835858436 0.762605658470202 1.52106521407739 1.17587931294219 0.978786985154578 0.984179435066766 1.26195763683188 1.25943472253319 1.88163118222504 3.52543119571598 4.62439128311575 4.49211563578304 4.16294952543937 2.7189329408505 4.01029578828715 4.59118178166161 4.44548426746291 4.56980420108874 1.97184511370357 0.534789594464447 0.535253487920831 0.534789594464447 0.534789594464447 0.534789594464447 0.542840971867659 0.540225777778995 0.542617314959885 0.534789594464447 0.541426093457834 0.538753835551242 0.54398890580179 0.536998477875518 0.534789594464447 0.534789594464447 0.537146395915708 0.536492116469498 0.535225735536842 0.534789594464447 5 5|0 +|/ 26014996 26019380 26018069.5 26014730 26019691 + gene protein_coding_gene TRUE TRUE AT5G65080.1|AT5G65080.2 MAF5 (MADS AFFECTING FLOWERING 5); transcription factor|MAF5 (MADS AFFECTING FLOWERING 5) Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported. similar to MAF4 (MADS AFFECTING FLOWERING 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65070.1); similar to 80C09_26 [Brassica rapa subsp. pekinensis] (GB:AAZ41837.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.724506957608901 8.22358805543363 6.45309927326132e-06 0.0292196335093272 9.4792903566307 4.43180822937149 0.724506957608901 0.0622896157471789 AT5G18460_at 4.27317704524153 4.06309122843773 3.54629016703048 3.46354303458227 3.76420313804729 3.88239600273634 4.22941513327615 4.21551140465204 5.57455224246268 4.69147190350387 6.43070500729139 6.94915521971988 5.76939235271518 5.63571344432786 6.84464193784444 6.12678914756454 4.58938484531397 6.34172739898748 5.16932429811005 0.227802483050433 0.236847408677515 0.232078061561694 0.228879487646516 0.231018141914446 0.239076649401007 0.229240001941074 0.237869121491350 0.226357099996312 0.232263545865737 0.226357099996312 0.229732354363170 0.226357099996312 0.233164517094570 0.226357099996312 0.228894327419378 0.233568184867816 0.226357099996312 0.229552929761607 5 0|5 /|+ 6125805 6126373 6126179.1 6122902 6126723 + gene protein_coding_gene TRUE TRUE AT5G18460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23340.2); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE82132.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.689032861481077 -8.21643407765028 6.50531552165047e-06 0.0294495633665117 9.4736985001735 9.54523080287354 -0.689032861481077 0.0441699800475265 AT5G48410_at 2.34383793610745 2.17340306208055 4.91165640577888 4.77130303400578 2.27144225489873 2.64220861925155 1.18658406241959 1.29824692407575 1.41807938775610 0.97577641116893 1.16578285298700 1.11980696171183 1.12019057227569 0.91432092676057 0.890981697639668 1.25632569978207 1.77855417900401 1.66280745471454 1.46950490278071 0.237709409317089 0.247875384600477 0.262844931376433 0.253913778810966 0.253323702745385 0.247679900694195 0.243529690261298 0.240435370030148 0.240872062777853 0.239613115883121 0.256574345610053 0.243649186362075 0.240027663543782 0.242293538799038 0.241802389204949 0.239247297967281 0.251945400337008 0.239761726416824 0.247719526288076 5 5|0 +|/ 19639812 19640451 19640187.4 19637493 19640651 + gene protein_coding_gene TRUE TRUE AT5G48410.1 ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 1.3 precursor (Ligand-gated ion channel 1.3) (GLR1.3) [Arabidopsis Thaliana] (GB:Q9FH75); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.75896149660779 8.21067461542167 6.5476853011292e-06 0.0296348236729107 9.46919188490717 3.96302688416628 0.75896149660779 0.0771372420542202 AT5G44030_at 1.48592572593106 1.86758696973389 4.67657424187881 4.66237183489669 3.91365582764563 2.90276573900668 2.53569131933336 2.17554884785198 3.03864280861121 2.42841755162684 3.87116545496299 4.34335568463833 3.26104630194329 4.39939121174018 4.50266731731431 3.98286356995975 6.72808746388312 4.23189590206209 3.42231708022722 0.248367598239197 0.248689511391062 0.244795496580893 0.243099589596827 0.226586533722526 0.239992533982598 0.234131061286577 0.225779935378724 0.226980379309145 0.235256516319251 0.225779935378724 0.225779935378724 0.227382441441211 0.243395167767619 0.238056884060235 0.225779935378724 0.247396010834991 0.251633715787764 0.225779935378724 5 5 + 17736220 17736752 17736493.636 17731872 17736950 + gene protein_coding_gene TRUE TRUE AT5G44030.1 CESA4 (CELLULASE SYNTHASE 4); transferase, transferring glycosyl groups Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Identical to Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) (CESA4) [Arabidopsis Thaliana] (GB:Q84JA6;GB:Q8GZN8;GB:Q9FNC3); similar to CESA3 (CELLULASE SYNTHASE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G05170.1); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to cellulose synthase 2 [Eucalyptus grandis] (GB:AAY60844.1); similar to cellulose synthase [Populus tremula x Populus tremuloides] (GB:AAT09894.1); similar to xylem-specific cellulose synthase [Populus tremuloides] (GB:AAQ08987.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150) 1.18928242160018 8.2098881944334 6.55349376268488e-06 0.0296545592761491 9.46857620231652 6.71660752668548 1.18928242160018 0.197120458236567 AT5G18640_at 7.61493356581298 7.84041806379594 9.01661277042924 9.01683293822597 10.0385819983116 9.43442316743385 7.08737184144772 6.53239405193283 7.1777361303677 7.30067972104635 9.32062891640201 8.75054329313931 8.95187320666387 9.06091886793964 8.71205933342538 9.12238462081245 8.7960147722615 8.96124960830496 7.53626643967645 0.194356787051194 0.186994094955635 0.196133320800618 0.190237517027906 0.184032694300101 0.188498570190795 0.197067509194979 0.192913897048220 0.200588050560013 0.192862211037500 0.184032694300101 0.184032694300101 0.189490880600951 0.189887324010589 0.185206962643531 0.184032694300101 0.197825173847581 0.190117840270758 0.192181005152136 5 5 + 6214458 6215470 6214962.182 6213249 6215784 + gene protein_coding_gene TRUE TRUE AT5G18640.1 lipase class 3 family protein similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18630.2); similar to Os05g0372400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055362.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.985249467450968 8.18484043593796 6.74144112354861e-06 0.0304982796429339 9.44892489258134 16.4715393035398 0.985249467450968 0.147233983207664 AT5G60870_at 3.30135367647202 3.3043573132052 3.28102683298897 3.395887782657 2.89363452763616 3.36436386108288 3.2019787987678 3.60629000608527 3.53802198876894 3.86585639978232 3.14446431240535 3.24768964682988 3.40391826495895 3.51004087186679 3.10044457846345 3.29665709620447 3.40035994593566 3.65477678658336 3.93579518253203 0.211008357919643 0.213079518042993 0.213173543041112 0.212341698355958 0.204767037883130 0.211476407589866 0.216667694393222 0.206584282231202 0.217725211708865 0.210060556056452 0.204767037883130 0.205057594544094 0.204767037883130 0.223538997584636 0.215607085295882 0.204767037883130 0.207807371245114 0.208531644283060 0.212507907604708 5 5 - 24503028 24503821 24503421.182 24502881 24505050 - gene protein_coding_gene TRUE TRUE AT5G60870.1|AT5G60870.2|AT5G60870.3 regulator of chromosome condensation (RCC1) family protein similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABD32475.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091)|similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G02510.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABD32475.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) -0.849159436524616 -8.16957623943604 6.85882916517236e-06 0.0310224843140746 9.43690964111627 6.85595416399545 -0.849159436524616 0.109210480423730 AT5G16130_at 10.0843599267705 10.2189993172152 9.82451927486572 9.74023052537096 9.95689122800085 9.84638218746922 10.6413728370399 10.5271757793564 9.61124789438415 9.93794589942106 10.2427818590832 10.8837269315966 10.1485680279301 9.87416232623405 10.9605851690740 9.98673701201029 10.2539808543018 9.9871009264144 9.85675836317018 0.116824193456554 0.110317096444613 0.119675820916097 0.113349278303277 0.107211422113598 0.120028139406647 0.111521905129834 0.115106060816256 0.124923174038983 0.117458855704826 0.112041102898858 0.108584410139931 0.115725254025305 0.119216803207279 0.120127829541309 0.113585582581125 0.114426511504911 0.111635337110985 0.116343183179472 5 5 + 5269307 5269883 5269623.727 5268424 5270159 + gene protein_coding_gene TRUE TRUE AT5G16130.1 40S ribosomal protein S7 (RPS7C) Identical to 40S ribosomal protein S7-3 (RPS7C) [Arabidopsis Thaliana] (GB:Q8LD03;GB:Q9LF15); similar to 40S ribosomal protein S7 (RPS7B) [Arabidopsis thaliana] (TAIR:AT3G02560.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96919.1); contains InterPro domain Ribosomal protein S7E; (InterPro:IPR000554) -0.676682090613893 -8.16609763058983 6.88588915947768e-06 0.0311379907791581 9.43416723162624 20.1520861048389 -0.676682090613893 0.0388836441988831 AT5G07180_at 2.48038685054318 2.58211631240192 1.98561645665331 2.43087225598703 2.33105969165236 2.33951541677293 3.20915477499614 3.74311099607658 2.47257432056304 3.06919925059219 2.14618736937625 2.73306850166335 2.56728561416239 2.17679005043988 2.96599219635011 2.13012254273074 2.05252449262479 2.54890532834670 2.94285783443703 0.223634460184149 0.213793164156339 0.221707759293839 0.215812684477544 0.221022707370248 0.216518756902129 0.222585097172088 0.215726297096498 0.221560398894098 0.214476625118037 0.214192009216566 0.219488321553189 0.220552636415563 0.219318536175157 0.217135452782083 0.212690199739273 0.216287532177709 0.211747305326960 0.210132587712175 5 5 - 2227846 2228384 2228115.909 2227572 2233418 - gene protein_coding_gene TRUE TRUE AT5G07180.1 ERL2 (ERECTA-LIKE 2); kinase Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. similar to ER (ERECTA, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1) [Arabidopsis thaliana] (TAIR:AT2G26330.1); similar to ERL1 (ERECTA-LIKE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G62230.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26312.1); similar to putative receptor protein kinase [Sorghum bicolor] (GB:AAL68842.1); similar to putative transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD44800.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.886005486687804 -8.12699246191945 7.19815709391368e-06 0.0325428682215837 9.40323016602906 5.25938908463169 -0.886005486687804 0.121604904654487 AT5G48380_at 10.2729079811206 10.5039310230796 11.0548192662742 11.1181544960635 10.7178666743805 10.4741413251502 6.70729574685739 7.25318664779324 8.88958630780233 7.6492100024159 9.25326826498594 9.68285793168275 8.53537737338617 9.17635811024835 8.90364150617965 9.0384913360899 8.76745554298937 9.35744304500619 7.56554097000243 0.152749564319722 0.150815215172786 0.150815215172786 0.153827172563813 0.150815215172786 0.153541414407661 0.172831939834293 0.168703941558819 0.157817613743856 0.166581009621810 0.150836205049106 0.150815215172786 0.159257022765286 0.152574861940632 0.151325618058779 0.150815215172786 0.152932896678965 0.150815215172786 0.172086065735116 5 5 - 19621851 19622380 19622123.909 19621315 19624285 - gene protein_coding_gene TRUE TRUE AT5G48380.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.851984800689865 8.1266912174012 7.2006212522546e-06 0.0325468080601908 9.40299107258502 18.3248582612039 0.851984800689865 0.111453372941220 AT5G45880_at 1.21183203527140 1.73884375385877 1.90105806273995 1.82518943642251 1.38064800477011 1.64032604288024 1.67510052932132 2.14847705871897 6.23119939235303 1.84697566847684 1.99362982935545 1.92214979197763 2.25652191752742 1.61317593600704 1.91590324008934 1.91141647061619 2.32301789577253 2.02525324653424 2.13238306480447 0.226470484340044 0.211743469949922 0.211743469949922 0.221665532760927 0.21289975046107 0.211743469949922 0.219162872096291 0.216373723535994 0.249965328515298 0.216656182386576 0.211743469949922 0.220075007074539 0.220818312983692 0.215355074848215 0.225375513842942 0.211743469949922 0.224296666986680 0.213002721467660 0.220484876393921 5 5 - 18627168 18628219 18627522.455 18626891 18628393 - gene protein_coding_gene TRUE TRUE AT5G45880.1 pollen Ole e 1 allergen and extensin family protein similar to pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana] (TAIR:AT4G18596.1); similar to Olee1-like protein precursor (GB:O49813); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041); contains InterPro domain Ole e 1 allergen; (InterPro:IPR006040) -0.913537390976374 -8.07300896803965 7.65464666774148e-06 0.0345913482915237 9.36019494663984 4.38951082359612 -0.913537390976374 0.131226955849671 AT5G67340_at 5.46321550064612 6.18595488268698 8.37092658371913 8.58099981904065 7.04336966609035 6.66939602306819 2.16735369437798 2.43878119452659 3.78282358833488 2.25620769889522 2.60489384971285 3.05208213418377 2.24770141662792 3.74403172503212 2.05105086529938 2.38944169619866 3.42993545185685 2.72450664627582 2.28531999657258 0.258412589200253 0.247316869245002 0.257288499970045 0.25420267523951 0.259384298377188 0.252090851612596 0.24142287910719 0.24142287910719 0.249098360153268 0.246214966667870 0.241911026170576 0.244821919130570 0.25346983679342 0.244357514439706 0.244463249463409 0.24142287910719 0.250454198577667 0.242123892423124 0.253889013756039 5 5 + 26883989 26884482 26884255.091 26881782 26884828 + gene protein_coding_gene TRUE TRUE AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G23140.1); similar to arm repeat-containing protein [Nicotiana tabacum] (GB:AAO61490.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.991877324867767 8.06485762082708 7.7262527943516e-06 0.0349072101248805 9.3536635601563 8.64261928772749 0.991877324867767 0.152838931326357 AT5G50110_at 5.5366354435525 5.58519254178766 6.15698252098017 6.07317352246671 6.59557654482215 6.63352553138344 6.28536484738144 6.4338471088743 6.2681433212478 6.7462825099906 6.92927260402 6.69233948418261 6.8971638049221 7.0724326226751 6.36788252541365 6.70496999047138 7.06787984365324 6.355460235451 6.15807963230456 0.189629625593380 0.191378763100575 0.194174726974808 0.191913634392556 0.185271532660551 0.188435704717962 0.191296669744277 0.197656649700740 0.200837472582163 0.187683190256743 0.185271532660551 0.187798882903285 0.189072710425341 0.191096662365008 0.190586923375927 0.186408218520643 0.197477141630449 0.191490406114150 0.191636833075239 5 5|0 +|/ 20391480 20393269 20392735.333 20390794 20393433 + gene protein_coding_gene TRUE TRUE AT5G50110.1 methyltransferase-related similar to Glucose inhibited division protein [Medicago truncatula] (GB:ABE82388.1); contains InterPro domain Glucose inhibited division protein; (InterPro:IPR003682) -0.658284063108582 -8.06202174076748 7.75133427739035e-06 0.0350127769309722 9.35138922019113 12.7384174043375 -0.658284063108582 0.0313744084924739 AT5G58040_at 7.50099906045182 7.43697279705793 7.84571171712303 7.98200314151661 8.29388093968321 8.1477517680906 7.4213910533301 7.46234442992127 7.76535171198494 7.91275462483759 7.96938711226775 8.012807185919 7.57376167818597 7.91997560701582 7.63385931560024 7.70050604742058 7.84117547524052 7.99846214010905 7.96244225157012 0.156852857795177 0.150319669526348 0.151065579943428 0.147487232187731 0.149975964297930 0.152073042470336 0.148007105234878 0.145051795470996 0.161896425989536 0.153279447310638 0.150596399978100 0.143593884795011 0.150986063284990 0.158534480778037 0.147250047670608 0.143593884795011 0.150164091251099 0.153602760734768 0.146381726934539 5 0|5 /|+ 23510468 23510877 23510683.5 23505974 23511226 + gene protein_coding_gene TRUE TRUE AT5G58040.1 ATFIP1[V] (ARABIDOPSIS HOMOLOG OF YEAST FIP1 [V]); RNA binding Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to putative Fip1 motif containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77079.1); contains InterPro domain Fip1; (InterPro:IPR007854) -0.662927212708103 -8.03181834501646 8.02399109961211e-06 0.0362363438058483 9.32710069267424 15.6170942049055 -0.662927212708103 0.0369971398471431 AT5G16715_at 6.00018853651972 6.18843266429336 6.5406057162263 6.35824403321147 7.14615134759418 6.3711955139861 7.25354245929973 7.08205018130072 5.65424576042706 6.90183996393628 6.13490962748159 6.81650581205319 6.49788729973033 6.27213475753143 7.38602886477178 7.38415811119146 7.27192493840332 6.67383623550178 7.25160608340834 0.190321217018190 0.188630997556246 0.182239075248212 0.184033834738658 0.189595435150166 0.194383302032339 0.191115687651124 0.192083929630293 0.192175498716111 0.18432962970171 0.195272947644812 0.187747532450956 0.189117060515193 0.190615566883724 0.187280599204463 0.187732674947225 0.195100404325315 0.192173823516586 0.182239075248212 5 5|0 +|/ 5491823 5492933 5492561.3 5485356 5493523 + gene protein_coding_gene TRUE TRUE AT5G16715.1 EMB2247 (EMBRYO DEFECTIVE 2247); ATP binding / aminoacyl-tRNA ligase similar to TWN2 (TWIN 2), ATP binding / aminoacyl-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G14610.1); similar to putative valyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC83606.1); similar to valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] (GB:ZP_01531202.1); similar to Isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri] (GB:CAL55105.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain tRNA synthetase, valyl/leucyl, anticodon-binding; (InterPro:IPR013155); contains InterPro domain Valyl-tRNA synthetase, class Ia; (InterPro:IPR002303); contains InterPro domain Aminoacyl-tRNA synthetase, class Ia; (InterPro:IPR002300); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) -0.957068695396365 -8.03016020662335 8.03925688111506e-06 0.0362972448182345 9.32576378561134 13.3211698774324 -0.957068695396365 0.144649040749751 AT5G08640_at 3.43955306575745 3.69035111543002 3.47591441297562 3.54512076657921 3.16124828141353 3.34552710831631 3.97516646637460 3.85018871888788 3.78959772215462 3.79092993989128 4.05154843997499 5.2160534255426 3.59509830625498 3.35089607703414 4.55658013016704 3.89914447291988 3.86253325847692 3.90899216811568 3.68453409637914 0.204294890842565 0.20321794142443 0.209065832889269 0.205529473559849 0.209277287752298 0.204396808298878 0.208749601828049 0.206879668964318 0.212816783945169 0.206200459947625 0.207132426300965 0.225833662760698 0.20775428556787 0.210898922220967 0.210004769933929 0.204536012279892 0.205521728181171 0.20708737494616 0.204926189718238 5 5 + 2804424 2805148 2804786.455 2803959 2805448 + gene protein_coding_gene TRUE TRUE AT5G08640.1 FLS (FLAVONOL SYNTHASE) Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Identical to Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS 1) (FLS1) [Arabidopsis Thaliana] (GB:Q96330;GB:O04730;GB:O04731;GB:O04732;GB:O04830;GB:O04831;GB:O04832); similar to FLS (Flavonol synthase), flavonol synthase [Arabidopsis thaliana] (TAIR:AT5G63590.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (CitFLS) (GB:Q9ZWQ9); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.700402751789026 -8.02222612193454 8.11273833844984e-06 0.0366209008597626 9.31936173436345 7.46544692744306 -0.700402751789026 0.0592613825623036 AT5G62860_at 2.61650000720805 2.63816818487908 3.23483388007028 2.97088515480343 3.39942979773826 3.33810998244269 1.87364470469161 1.46417856316588 2.49157648257339 1.87350161885447 3.62584267208032 2.90768743174379 3.19907808662177 3.34889888412671 3.13407319193435 2.71269124870663 2.25032156876776 3.05754083357506 1.58526935521082 0.21908770320919 0.222930945252706 0.217651156121029 0.217651156121029 0.228380424886624 0.231743832062452 0.231395639908318 0.234516384411801 0.220866009066779 0.236096914486974 0.227014069539635 0.230503059550866 0.221964344863938 0.222817109720674 0.224610084682195 0.218991735016689 0.222893582172967 0.217651156121029 0.223493035074278 5 0|5 /|+ 25251312 25251754 25251486.667 25249858 25251793 + gene protein_coding_gene TRUE TRUE AT5G62860.1 F-box family protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48020.1); similar to IS10 transposase, putative [Lycopersicon esculentum] (GB:ABI34274.1); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 0.762031686090464 8.01923341261165 8.14064353924447e-06 0.0367387242926103 9.31694473671962 5.19845173032863 0.762031686090464 0.0850544008423884 AT5G47800_at 1.78275843848642 1.62387513762403 2.04808386128691 1.93478002877009 2.48253395223007 2.68754983919098 1.41704740243293 1.52959684214010 1.05172086094149 2.03790568252202 2.53663882694858 3.27160255552884 3.00135418436437 3.2267295878038 3.28897209748711 2.83006147990708 2.75517510100622 2.94591601230292 2.60437274869368 0.222296980608525 0.214022285116664 0.226322727465536 0.228340421975208 0.218904487393254 0.221989871947288 0.218754868724171 0.216044479784067 0.226529938121218 0.224745594889252 0.214398443627491 0.221855092541415 0.232473830727376 0.219296454412626 0.222021289642320 0.221729594487513 0.217905531262882 0.218992920594573 0.219027646090484 5 5|0 +|/ 19372638 19373198 19372883.5 19370902 19373526 + gene protein_coding_gene TRUE TRUE AT5G47800.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G67900.2); similar to putative non-phototropic hypocotyl 3 [Oryza sativa (japonica cultivar-group)] (GB:BAD26466.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.687223028896533 8.01843056158977 8.14814727210486e-06 0.0367644404917371 9.31629612929705 4.3783061851307 0.687223028896533 0.0527122778942635 AT5G63380_at 6.30221456529122 6.36553145563544 6.52598517693291 6.64567129489517 7.02691798918289 6.85601583907729 7.170807026135 7.33095427311838 7.27152343824547 7.07264050588277 8.0210775980942 8.0062647694142 7.53095869496909 7.87219995115478 7.50625366740877 8.28227226128771 7.15224439832057 7.80359564994316 6.78074108812822 0.194897262530355 0.185332861660764 0.196830766302689 0.200135537825147 0.185332861660764 0.186323998243281 0.187972144791575 0.187522953681159 0.197896472162013 0.187698404069658 0.190766097483417 0.196002986365346 0.187851104055140 0.198427694975638 0.196452556091584 0.185332861660764 0.196137415922110 0.196449247162432 0.188017515810471 5 5|0 -|/ 25404840 25406000 25405559.333 25404637 25407289 - gene protein_coding_gene TRUE TRUE AT5G63380.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. similar to OPCL1 (OPC-8:0 COA LIGASE1), 4-coumarate-CoA ligase [Arabidopsis thaliana] (TAIR:AT1G20510.1); similar to putative 4-coumarate:coenzyme A ligase [Oryza sativa (japonica cultivar-group)] (GB:BAD82768.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) -0.675994522185537 -8.00927436572758 8.23425506574975e-06 0.0371447246015971 9.30889297200518 14.1847588948216 -0.675994522185537 0.0468171179359523 AT5G15910_at 7.47198966521294 7.20405244773131 7.8387254458582 7.89889697082848 7.77038230369332 7.57668174176853 8.04787052892085 7.97156718148629 7.60156935478284 7.73395559459899 8.02887151116846 8.1949761235735 7.778474795188 8.24451605517487 7.8221520875472 8.24066687913403 7.64408275304869 8.00070675425956 7.43480550884753 0.127863924849490 0.123980733260797 0.125529689173712 0.127350070046819 0.123239000739977 0.126984912475356 0.125429747220696 0.120247550234983 0.137224976676789 0.122207600991023 0.123267015260181 0.119845025343449 0.128063335243183 0.12658771987779 0.126960641839521 0.119238574333793 0.123057909780394 0.126706245680627 0.122343900498913 5 5|0 +|/ 5194176 5195167 5194905 5193114 5195399 + gene protein_coding_gene TRUE TRUE AT5G15910.1 dehydrogenase-related similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT5G10730.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96868.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.699902677052332 -8.00766784859381 8.24946441524268e-06 0.0372050845127445 9.30759288991379 15.5147287970024 -0.699902677052332 0.0596356197884584 AT5G55920_at 5.48267541382349 5.42349864072555 5.42269273244118 5.79945235969178 5.13721136904291 4.60672856365787 5.95312995950276 5.34731849795465 5.45271426449426 5.50644065239826 5.70859473420748 6.36819380605843 5.45215402420102 5.58243893891879 5.86150589703772 6.18912601722277 5.7780883570809 5.75275359588801 5.63278738745851 0.205172966457146 0.202703270225776 0.217473939003311 0.212109721585171 0.202703270225776 0.206070101036053 0.215185016287643 0.207521303841699 0.214984387986390 0.209325729773218 0.215144779197334 0.206042458714755 0.212369207383005 0.206091672013266 0.207617300688713 0.208510535579956 0.218120650746662 0.218430360052053 0.210956823275856 5 0|5 /|- 22663168 22663793 22663532.25 22662709 22666673 - gene protein_coding_gene TRUE TRUE AT5G55920.1 nucleolar protein, putative similar to nucleolar protein, putative [Arabidopsis thaliana] (TAIR:AT4G26600.1); similar to Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p [Medicago truncatula] (GB:ABE89312.1); similar to Os09g0551300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063867.1); similar to putative proliferating cell nuclear protein P120 [Oryza sativa (japonica cultivar-group)] (GB:BAD12915.1); contains InterPro domain Nop2p; (InterPro:IPR011023); contains InterPro domain rRNA subunit methyltransferase; (InterPro:IPR006174); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; (InterPro:IPR001678) -0.98960512569152 -8.00497656495242 8.2750116231932e-06 0.0373120274089782 9.30541418682888 11.0802156201603 -0.98960512569152 0.154190563499446 AT5G39410_at 5.95065661680347 6.50580431675621 5.20087878872524 5.48620635336859 7.09914816943183 6.08106952255432 2.57986839815592 2.71487816925027 2.66119888011694 3.10285707564913 5.20114472356662 6.00044860689061 4.69872457201387 5.76298027305325 6.25739212328598 4.66900149360835 4.23408409227945 5.68099339067157 2.3499632748041 0.273007246555612 0.26644623294945 0.275054530108135 0.262226570143431 0.262226570143431 0.284793364552655 0.26722946783213 0.271742632794309 0.276473464528733 0.271251244811239 0.267503439571421 0.263343594420594 0.265048898661748 0.262226570143431 0.270158442768418 0.265425522831543 0.265919508882075 0.275945171940986 0.278964223067888 5 5 - 15785698 15786186 15785952.455 15785421 15787638 - gene protein_coding_gene TRUE TRUE AT5G39410.1 Identical to Probable mitochondrial saccharopine dehydrogenase At5g39410 (EC 1.5.1.9) (SDH) [Arabidopsis Thaliana] (GB:Q8LGI2;GB:Q9ZR98); similar to MGC84136 protein [Xenopus laevis] (GB:AAH74314.1); similar to MGC82870 protein [Xenopus laevis] (GB:AAH73574.1); similar to Os07g0597100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060175.1); contains InterPro domain Saccharopine dehydrogenase; (InterPro:IPR005097) 1.20316643590983 7.9950609678245 8.36987646404138e-06 0.0377314030998985 9.29737880049563 9.21119841001969 1.20316643590983 0.207976325841295 AT5G52320_at 6.394657313389 6.66111250367718 5.98469926147884 6.11741659973111 6.07883583071358 5.67473314372787 7.65620715820265 7.76753711517125 5.94244911527732 6.47249843138737 8.1696999979054 8.57113501924403 7.3622447436747 7.7723314962365 7.97702992242836 7.27260452106538 6.89380041278488 7.90082231989515 5.69794759015168 0.216048531285045 0.207771140058061 0.208793181556089 0.205121099256298 0.214628792465185 0.218464146130758 0.21408102232078 0.209867792073076 0.220972716594629 0.206710431766767 0.217073406971828 0.222408536448978 0.206653725878493 0.213820150977829 0.215497853338006 0.206078001982909 0.209505110934500 0.212224929902117 0.210168518904236 5 5 - 21262363 21262825 21262654.364 21262204 21263908 - gene protein_coding_gene TRUE TRUE AT5G52320.1 CYP96A4 (cytochrome P450, family 96, subfamily A, polypeptide 4); oxygen binding member of CYP96A similar to CYP96A3 (cytochrome P450, family 96, subfamily A, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G65340.1); similar to cytochrome P450, putative [Arabidopsis thaliana] (TAIR:AT1G57750.1); similar to Os03g0140100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048917.1); similar to Os01g0183600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042228.1); similar to Cytochrome P450 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93891.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.770239304520464 -7.99244739316075 8.39507638850725e-06 0.0378366092830022 9.29525863749153 13.4306949989746 -0.770239304520464 0.0889685456823227 AT5G26860_at 4.03718267286567 4.02565265399707 4.85089208902829 5.2321946592246 3.94343834124791 3.88357782651969 4.063853535333 4.04714773270902 3.98297539734243 4.46023783093858 3.79723640480672 3.7210450258113 4.22668597273691 3.70402710845035 4.23511956470930 3.9708813909491 3.68250776948704 4.33162987572616 4.31492938711804 0.216486936176056 0.217049562882072 0.23134786258512 0.240426832720651 0.217072491083366 0.222721216390333 0.214188612865270 0.222367370590022 0.216793740742958 0.217810325563190 0.216213926754789 0.214188612865270 0.224009313117572 0.216427769821996 0.220688629039215 0.217089557824817 0.233946275590131 0.224461900189784 0.214188612865270 5 5|0 +|/ 9455963 9456588 9456238.2 9451051 9457003 + gene protein_coding_gene TRUE TRUE AT5G26860.1 LON_ARA_ARA (Lon protease homolog gene); ATP binding / ATP-dependent peptidase/ serine-type peptidase LON protease homolog (LON_ARA) mRNA, nuclear gene encoding Identical to Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) [Arabidopsis Thaliana] (GB:P93655;GB:O04954;GB:Q8RWX1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05790.1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05780.1); similar to Lon protease homolog 2, mitochondrial precursor (GB:P93648); similar to putative ATP-dependent proteinase LON2 [Oryza sativa (japonica cultivar-group)] (GB:BAD30304.1); similar to putative LON3 protease [Oryza sativa (indica cultivar-group)] (GB:AAY21162.1); contains InterPro domain Peptidase S16, active site; (InterPro:IPR008268); contains InterPro domain Peptidase S16, lon C-terminal; (InterPro:IPR008269); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon N-terminal; (InterPro:IPR003111); contains InterPro domain Peptidase S16, ATP-dependent protease La; (InterPro:IPR004815); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.71339491268675 -7.98283955707129 8.48842157365102e-06 0.0382488276108715 9.2874568252847 8.36617036097447 -0.71339491268675 0.0668866812041093 AT5G02860_at 6.36176945908604 6.01312488709798 6.88776164097083 6.76406188759677 7.91228930670569 7.47793087731504 5.44507671621059 4.80284915421894 4.01398551124553 4.29599528063846 6.18119276573735 6.79690883952631 6.98630885355746 7.0093455519729 6.17768769934737 6.2617344089384 6.54562303160313 6.07871646321149 4.09859377609209 0.231558800968533 0.232125077412119 0.240941827585183 0.238599256704668 0.237533638001780 0.245265439529016 0.237485895204528 0.235654189137939 0.245202561532246 0.241064863271301 0.238163557534765 0.234736703255675 0.231558800968533 0.237494622647694 0.235963731849126 0.231558800968533 0.235007643494122 0.237022778927575 0.239273905995170 5 5 + 656077 656512 656324.727 654100 656559 + gene protein_coding_gene TRUE TRUE AT5G02860.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G18940.1); similar to Os07g0590600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060154.1); similar to Os05g0275000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055073.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22929.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.966201990730042 7.98267226819875 8.49005677386736e-06 0.0382488276108715 9.2873208733905 11.7785486033480 0.966201990730042 0.148663742155368 AT5G06980_at 9.1298138517714 9.39702043316655 9.41846303001548 9.71100438938002 10.0691051506914 9.95627344854614 10.3929645236195 10.3961794481371 9.95309440837975 10.3292960695172 10.4266013260762 10.3427767501416 10.5404324416470 9.99292330684482 9.90490534010228 10.394699656405 10.0529704740652 9.95584303152799 10.5487794288871 0.108521163464152 0.102799303879083 0.106043455457835 0.10405145288385 0.100159019724268 0.102146836784468 0.102070099695586 0.101096001247483 0.114921019756788 0.098788513370129 0.104680336518676 0.100224283885999 0.101188611227682 0.103116007429356 0.108709012434333 0.098788513370129 0.101096405143749 0.0994806925170701 0.098788513370129 5 5|0 +|/ 2168043 2169072 2168561.9 2167537 2169392 + gene protein_coding_gene TRUE TRUE AT5G06980.1|AT5G06980.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12320.1) -0.721566370172194 -7.96035934106675 8.71123981474119e-06 0.0392354241255943 9.26915417140356 20.0480783726389 -0.721566370172194 0.0712937188153143 AT5G10790_at 5.46518646029115 6.35687866929282 7.40079705246798 7.41918540409771 7.45523607810267 7.34987196166308 4.93108421117457 4.83600631280354 3.93558823284106 4.04530590452488 5.71936815309076 6.07350008379306 5.62807171355329 5.74796685823451 5.64319954693046 5.7992235714787 5.58440973877039 5.4704227074038 3.28267939752457 0.269284014762417 0.264915733951966 0.284431737466233 0.268959460871684 0.267847315757585 0.268453932216836 0.266695759116591 0.265607520355218 0.274519543266908 0.277492401363799 0.262142773064460 0.264640182735847 0.272887295442894 0.268691568141196 0.267284891118829 0.262142773064460 0.268305614798265 0.283007408387717 0.276930970895959 5 5 + 3411969 3412535 3412202.182 3410540 3412634 + gene protein_coding_gene TRUE TRUE AT5G10790.1 UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT5G57990.1); similar to Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Zinc finger, UBP-type [Medicago truncatula] (GB:ABE86624.1); contains InterPro domain Zinc finger, UBP-type; (InterPro:IPR001607); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.991325089664195 7.95512951887432 8.76397751898327e-06 0.0394641907679817 9.26488653192359 11.1331781728802 0.991325089664195 0.156286138361772 AT5G63010_at 2.22390472871433 2.53520280779415 3.66851111601703 3.85245872828698 4.35029423330121 3.9571380307191 2.22698475230705 2.20505583817978 1.87085491094885 2.01133746572579 2.57543030337984 3.02399883079437 2.94068928345572 2.56074456401897 2.62444996744644 2.68479830039326 2.68919434156147 2.62888531950989 2.44574456064512 0.196683733458372 0.201675906568182 0.192845962390639 0.203889113161700 0.201176359204587 0.215049742992640 0.205256765559843 0.194076471028160 0.195716343796164 0.201068259063298 0.192845962390639 0.195753833714813 0.197577341734783 0.192845962390639 0.200211710027664 0.198165879521903 0.201842641936448 0.198470508888310 0.195060259016416 5 5 + 25299648 25300157 25299926.455 25298940 25300402 + gene protein_coding_gene TRUE TRUE AT5G63010.1 WD-40 repeat family protein similar to COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) [Arabidopsis thaliana] (TAIR:AT2G32950.1); similar to Os04g0507900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053266.1); similar to PREDICTED: similar to CG3184-PA [Danio rerio] (GB:XP_692484.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.776030148680206 7.9490874116624 8.82533618139278e-06 0.0397316634886303 9.25995148939874 5.54011186754491 0.776030148680206 0.0925148185276349 AT5G67570_at 3.97487148034864 3.82585855138679 4.51148728443782 4.63844297665454 5.43866449412893 5.13302374820498 3.22696238191302 3.36610526867348 2.25022613012623 2.61511199202334 3.41172030286319 3.63765889820077 4.01637081721326 3.59971987193922 3.85416475167398 3.53772548986725 3.89162479339823 3.29879225639938 2.01718020000188 0.228217671417797 0.220710440087204 0.219711930868706 0.215851468868204 0.219656522570317 0.22469743431152 0.215488220344490 0.215488220344490 0.224951669720779 0.239786615885295 0.215488220344490 0.216949669342041 0.220449443175044 0.217149825623734 0.217335722272102 0.21934001769145 0.226038900500360 0.222867095267284 0.224374104948978 5 5 + 26971404 26971974 26971713.727 26969551 26972073 + gene protein_coding_gene TRUE TRUE AT5G67570.1 EMB1408 (EMBRYO DEFECTIVE 1408); binding similar to EMB2279 (EMBRYO DEFECTIVE 2279), binding [Arabidopsis thaliana] (TAIR:AT1G30610.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE85862.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.710495684354551 7.94076356766273 8.91062762875482e-06 0.0401067349570254 9.25314476236757 7.23949948409097 0.710495684354551 0.0672690010878169 AT5G48880_at 9.24361953087498 9.19035860090976 9.08501300943952 8.99791059254982 9.20617870620607 8.88209474066574 9.71260729285324 9.57402353993596 8.50684135343872 9.0278384895727 9.25883654922573 9.44961063013648 9.09580695750613 9.22943549258539 8.93256731367385 8.95813400436639 8.96758529282906 9.20198212883736 8.31963046428256 0.127948796270196 0.126843727750795 0.126338045571258 0.131424203409773 0.121285774502091 0.133655228885637 0.128756846947261 0.131249287248689 0.124623466171831 0.129043924978253 0.125299294556399 0.126045810149435 0.123263817450994 0.121233093623819 0.120197715362710 0.124776825959277 0.138581595348846 0.132073615555655 0.126820483972571 5 0|5 /|- 19831816 19832529 19832155.333 19831628 19835123 - gene protein_coding_gene TRUE TRUE AT5G48880.1|AT5G48880.2|AT5G48880.3 KAT5/PKT1/PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 1, PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2); acetyl-CoA C-acyltransferase Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. Identical to 3-ketoacyl-CoA thiolase 5, peroxisomal precursor (EC 2.3.1.16) (Beta- ketothiolase 5) (Acetyl-CoA acyltransferase 5) (Peroxisomal 3-oxoacyl- CoA thiolase 5) (KAT5) [Arabidopsis Thaliana] (GB:Q570C8;GB:O65339;GB:Q9S774); similar to PED1 (PEROXISOME DEFECTIVE 1), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT2G33150.1); similar to 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis sativus] (GB:CAA47926.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to 3-ketoacyl-CoA thiolase 5, peroxisomal precursor (EC 2.3.1.16) (Beta- ketothiolase 5) (Acetyl-CoA acyltransferase 5) (Peroxisomal 3-oxoacyl- CoA thiolase 5) (KAT5) [Arabidopsis Thaliana] (GB:Q570C8;GB:O65339;GB:Q9S774); similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative [Arabidopsis thaliana] (TAIR:AT1G04710.1); similar to PED1 (PEROXISOME DEFECTIVE 1), acetyl-CoA C-acyltransferase [Arabidopsis thaliana] (TAIR:AT2G33150.1); similar to 3-ketoacyl-CoA thiolase; acetyl-CoA acyltransferase [Cucumis sativus] (GB:CAA47926.1); similar to acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit (GB:S72532); similar to Thiolase [Medicago truncatula] (GB:ABE94567.1); contains InterPro domain Thiolase; (InterPro:IPR002155) -0.701333101556787 -7.93109844611272 9.01078157548485e-06 0.0405485170896818 9.24522954693446 18.1138998676342 -0.701333101556787 0.0635040897692658 AT5G15880_at 5.58365825178163 5.83067844787209 6.1688595561429 5.98948842066786 6.63521697366917 6.33474441640933 5.94757627943026 5.66384984118141 6.23872569451483 6.56464904184944 6.71091949681764 6.6998331798962 5.8801604629731 6.6706695438584 6.66992575497034 6.25037195974492 5.99629049373899 6.67472443623294 6.42286400039507 0.226765566332796 0.203946810014305 0.212927143434524 0.225478688050059 0.207923642049342 0.224482986942996 0.203946810014305 0.215933517014137 0.233105828844198 0.210484172636992 0.204492959004514 0.210703641011441 0.208863677656015 0.212942148142493 0.20425443752489 0.20780844488361 0.2139505708083 0.213104371084355 0.209701669635992 5 5|0 +|/ 5186473 5187425 5187024.6 5185781 5187709 + gene protein_coding_gene TRUE TRUE AT5G15880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32240.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96950.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) -0.76170869421348 -7.9055103132567 9.28185580393399e-06 0.041759069261899 9.22421352861244 12.4456881042021 -0.76170869421348 0.088913295427883 AT5G57050_at 5.27993036193545 5.45874181719661 7.4694757729878 7.44558601953824 7.45167154916817 7.25245286079387 6.34489205000762 6.14690586211052 4.96827079337837 5.35058532827641 6.90489546445738 6.96723450785817 7.57332200612658 6.52627738858599 6.50687524408985 7.20031506546136 8.03394400608034 7.22617892651787 5.43837887905102 0.194030989406823 0.187416963007399 0.186335424098276 0.188828157495982 0.194820339669527 0.189846127757483 0.190582087981563 0.187570341701865 0.207759163090281 0.192314641423352 0.187307371300030 0.1840166412154 0.192198948688214 0.187648765861516 0.185784413729516 0.187662863487944 0.194870510176995 0.1840166412154 0.196803569689613 5 5 + 23105703 23106409 23106032.091 23104461 23106853 + gene protein_coding_gene TRUE TRUE AT5G57050.1 ABI2 (ABA INSENSITIVE 2); protein phosphatase type 2C Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. Identical to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2) (ABI2) [Arabidopsis Thaliana] (GB:O04719); similar to ABI1 (ABA INSENSITIVE 1), calcium ion binding / protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT4G26080.1); similar to Os05g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056498.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:AAT39223.1); similar to Os01g0583100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043415.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.685166403944098 7.88195001943168 9.53924913698425e-06 0.0429075426181552 9.20478483176543 12.7911030332418 0.685166403944098 0.0577678327975694 AT5G02260_at 6.16890001075749 6.15491020564905 7.20388104351828 7.34705373586599 6.48601155217513 6.47282271122033 5.14813052449836 5.72238451969507 2.53097092907981 3.12747904403614 4.90355161925986 5.56511549269344 4.90416980019771 4.99605549671409 4.72611715071484 6.05595196615277 5.45504883540382 4.46308793122543 2.52221378990382 0.279187851306946 0.267796394487413 0.291744115647347 0.284051311848994 0.273405096106243 0.287406889870067 0.285474041071654 0.2699123688951 0.29345164438786 0.269104675092842 0.272872498968917 0.274947877154491 0.281022580499747 0.292993416735057 0.28464500530803 0.275332863763992 0.291492775680702 0.287671104330577 0.286378348422289 5 5 + 463525 464773 464112.182 463156 465244 + gene protein_coding_gene TRUE TRUE AT5G02260.1 ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A9 precursor (AtEXPA9) (Alpha-expansin-9) (At-EXP9) (AtEx9) (Ath-ExpAlpha-1.10) (EXPA9) [Arabidopsis Thaliana] (GB:Q9LZ99); similar to ATEXPA3 (ARABIDOPSIS THALIANA EXPANSIN A3) [Arabidopsis thaliana] (TAIR:AT2G37640.1); similar to expansin [Pyrus communis] (GB:CAH18933.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) 0.798251667683655 7.87890493684644 9.57307499687558e-06 0.0430501182609495 9.20226825783764 10.2682743916984 0.798251667683655 0.102473458283249 AT5G55280_at 8.32072718478203 8.04949886757858 8.10195820583701 7.99048637672176 8.07370427402246 7.92543322046254 8.71842472058885 8.32222907578078 7.90601350607062 8.3722584629563 8.78929441065341 8.9887640283279 8.52773245181941 8.7920797223003 9.16681244644386 8.8904038668481 8.65541874216225 8.37485893829237 8.43099975558447 0.119804575037379 0.119661986624381 0.114648724754896 0.11730948838542 0.116342697734246 0.128108168971947 0.114574654870186 0.115511636781468 0.127154127023554 0.126438973163270 0.117117381880325 0.113126459819551 0.120431690566368 0.119492261968594 0.120618851610121 0.113126459819551 0.121671230119968 0.119627284989222 0.120572501070734 5 5 - 22437987 22438736 22438240.727 22437881 22439875 - gene protein_coding_gene TRUE TRUE AT5G55280.1 FTSZ1-1 (FtsZ1-1); structural molecule Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. Identical to Cell division protein ftsZ homolog, chloroplast precursor (FTSZ) [Arabidopsis Thaliana] (GB:Q42545;GB:Q9FLN6); similar to FTSZ2-2 (FtsZ2-2), structural molecule [Arabidopsis thaliana] (TAIR:AT3G52750.1); similar to cpFtsZ (GB:AAA82068.1); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Cell division protein FtsZ; (InterPro:IPR000158); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280) -0.758906577588013 -7.87178016778363 9.65272675309867e-06 0.0433986594819316 9.19637515858927 16.6926049827516 -0.758906577588013 0.0890762741515545 AT5G23550_at 6.0609017415132 5.94118677740865 7.42382457080121 7.06549172498853 7.72764777391789 7.47062231921314 6.38160306532988 6.10359298799818 3.89237821184538 4.14563000591027 6.89747472666048 6.36886112565307 6.65567097394118 6.30264429046539 6.57507566868519 6.39325610972432 6.32227476855853 6.23416289519082 4.46110859379555 0.259157601234925 0.259157601234925 0.259157601234925 0.271154686581566 0.259157601234925 0.276626217016691 0.262180286337789 0.267491158403797 0.279129431202793 0.271484237086008 0.266591893561603 0.261577850459151 0.260794748224130 0.271904423263786 0.260104380575853 0.259157601234925 0.269430432338779 0.27812780036074 0.273750360689155 5 5|0 -|/ 7939960 7941373 7940475.778 7939614 7941631 - gene protein_coding_gene TRUE TRUE AT5G23550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24170.1); similar to PREDICTED: similar to SFT2 domain containing 2 [Bos taurus] (GB:XP_583469.1); similar to Os02g0564500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047161.1); similar to SFT2 domain containing 2 [Mus musculus] (GB:NP_663487.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 0.768567704342852 7.87129237906079 9.65820613665676e-06 0.0434136365842721 9.19597144263984 12.0893837903348 0.768567704342852 0.0925617272581081 AT5G40990_at 1.11365124024655 0.911206899796394 3.45539799422331 3.56321318428084 1.93516796461623 1.22476479512605 0.404360132839292 0.425808263721389 0.554754925982815 0.822883064605896 0.780581777613618 0.505493490700353 0.659584834413736 0.729485640715085 0.87581102717595 0.536231238258232 0.96765060007592 0.75783273417742 0.542614530813936 0.240930389445159 0.233077731041498 0.265424222186883 0.264163814224596 0.237165018713063 0.2365252815001 0.232198709008108 0.233721307510698 0.234498048575247 0.232198709008108 0.233249108650702 0.238231061045975 0.235869581249245 0.232815560997402 0.233833795318044 0.240577296952391 0.235970095673683 0.242485387237651 0.243676899908455 5 5 + 16436879 16437590 16437267.364 16436148 16437628 + gene protein_coding_gene TRUE TRUE AT5G40990.1 GLIP1 (GDSL LIPASE1); carboxylic ester hydrolase Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. similar to GLIP2 (GDSL-motif lipase 2), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT1G53940.1); similar to lipase SIL1 [Brassica rapa subsp. pekinensis] (GB:AAM47031.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087); contains InterPro domain Lipolytic enzyme, G-D-S-L, active site; (InterPro:IPR008265) 0.883094044584155 7.86426718090417 9.73749468938925e-06 0.0437603011341153 9.19015348686849 2.31253035520234 0.883094044584155 0.129240730293658 AT5G22860_at 6.47688334249583 6.44833659789638 8.3979451784383 7.65011290040087 5.61522176820525 5.12569957054091 7.10365591289465 6.63386925270504 5.02058298297573 5.3812900998674 4.32961911986182 5.66089215406721 5.96613749203788 5.19860226737041 5.14437386862137 5.09060440142701 6.38434192675478 4.85543741996475 5.79295719401984 0.221399270760454 0.235235102962552 0.229302876838115 0.230588165606009 0.224724974048272 0.219222096968159 0.226487699657258 0.217653531013317 0.222315774074142 0.218554670125824 0.228293810657125 0.216195976484484 0.216195976484484 0.225875042018248 0.223879541972055 0.219805438282636 0.223178789239741 0.220663760850585 0.219957511642247 5 5 - 7639914 7641487 7641081.727 7639321 7642987 - gene protein_coding_gene TRUE TRUE AT5G22860.1|AT5G22860.2 serine carboxypeptidase S28 family protein similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT5G65760.1); similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT2G24280.1); similar to hypothetical protein LOC780095 [Xenopus tropicalis] (GB:NP_001072639.1); similar to Os01g0767100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044360.1); similar to Os06g0647400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058206.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S28; (InterPro:IPR008758) -1.05004832883354 -7.85996428248714 9.78640552247778e-06 0.0439703200124927 9.18658670549675 12.0449794855559 -1.05004832883354 0.174810868699942 AT5G09730_at 2.64240564651720 2.59817196878703 4.14598781498182 4.49784452596897 5.44423861790386 5.31962233145205 3.88629406766238 4.6432359078541 4.08815365270344 4.0311769915523 6.43963243038081 6.30372182198862 5.72397770425723 4.79318405296396 6.33355912749764 6.8914836442698 5.96391551758386 6.16187700613429 3.54396362354236 0.287265260946642 0.267495729892095 0.275292517787626 0.262214666243446 0.258546633737834 0.264591462670281 0.258282790833958 0.262407215652017 0.263575238060329 0.259814159044870 0.267213311180699 0.260349363516615 0.259593619790996 0.269879334028024 0.270316167056014 0.258308336767255 0.260009743152055 0.261380048680906 0.267834759146346 5 0|5 /|- 3015363 3015866 3015620.3 3015248 3018263 - gene protein_coding_gene TRUE TRUE AT5G09730.1 BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing O-glycosyl compounds encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] (GB:CAJ65922.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to LEXYL1 [Solanum lycopersicum] (GB:BAC98298.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.940730965180993 7.84448851811868 9.96452317873327e-06 0.0447606381188698 9.17373761980517 9.12931694467454 0.940730965180993 0.146254221923856 AT5G23310_at 6.49783840203116 6.15215226214228 5.71606407967287 5.67517842703723 6.33011833598553 6.08571386969113 5.70349366862383 5.62699025538809 4.37785481890841 4.49168892825599 4.59298480323702 5.54764146911168 4.70489983981964 4.62570658028451 6.12351466747776 5.05861838769586 5.40486536002907 4.68921253398996 4.75525980447247 0.228329427607175 0.224342329319406 0.227158134054320 0.223785435397480 0.224996740944482 0.234436806833146 0.224485988857537 0.222205270819804 0.22570005400329 0.229407055921980 0.223614746901605 0.221845482349375 0.223886828802863 0.225915526357606 0.230321113312572 0.226599359992214 0.229747079332984 0.223735306157836 0.226571190918184 5 0|5 /|+ 7851472 7852211 7851857.375 7850526 7852535 + gene protein_coding_gene TRUE TRUE AT5G23310.1 FSD3 (FE SUPEROXIDE DISMUTASE 3); iron superoxide dismutase Fe superoxide dismutase similar to FSD2 (FE SUPEROXIDE DISMUTASE 2), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT5G51100.1); similar to FeSOD [Gossypium hirsutum] (GB:ABA00456.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) -0.719084082139755 -7.84147473587098 9.99961580648988e-06 0.044908274586946 9.17123156511049 10.7909594821138 -0.719084082139755 0.0747862210488547 AT5G01460_at 4.74411250139338 5.23991208957146 6.07490146702322 6.21409520931414 6.77921034215374 6.33524602033111 5.30994415884631 5.5057283683656 5.61133328858949 4.24504161031978 7.15178859051445 7.61625457842544 7.2450192054156 7.86525162155254 7.95079311930737 7.07992338720137 6.42064658990644 7.15657017616387 4.28844975744116 0.282613636863679 0.287497725791337 0.294565961780744 0.294079294010125 0.279448138089786 0.294921752251654 0.284949740546025 0.282791290794330 0.281361675422268 0.298686013260763 0.278320244022755 0.281489279061267 0.294839938617987 0.288550068196454 0.285342009392321 0.278320244022755 0.317637101602212 0.281322071245579 0.289153215196850 5 5|0 +|/ 188837 189818 189310.7 186693 190456 + gene protein_coding_gene TRUE TRUE AT5G01460.1 LMBR1 integral membrane family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08930.1); similar to LMBR1 integral membrane family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD44783.1); similar to Os06g0128200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056670.1); contains InterPro domain LMBR1-like conserved region; (InterPro:IPR006876) 0.852520037374225 7.79447132347333 1.05645534006969e-05 0.0474348447691289 9.13198598154447 11.7882549999637 0.852520037374225 0.122444937781455 AT5G34940_at 2.96764224287656 2.90544412828524 5.54146757309343 6.13285563332483 2.95842739914096 2.6945847970154 2.15863231339608 2.11044717132429 2.55844265034346 2.60409617757468 2.77109271650181 4.08291428429144 2.82873506699231 3.69913153476873 3.39243118590603 3.11754396543207 3.46201639651393 2.54822688705868 2.15220590721335 0.198941471430666 0.210033332184207 0.241282605737225 0.233957867344264 0.201452788486526 0.201678943643548 0.203372839731988 0.207092966634610 0.207546287927303 0.201499185593931 0.202039207229678 0.201730335002992 0.201190989962949 0.197025823873177 0.207185171718462 0.201389638503009 0.197101898672019 0.203091765887416 0.196801699214307 5 0|5 /|- 13253145 13253894 13253473.444 13253059 13256069 - gene protein_coding_gene TRUE TRUE AT5G34940.1|AT5G34940.2|AT5G34940.3 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|Identical to Heparanase-like protein 3 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FZP1;GB:O82604;GB:O82605); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199)|similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07830.1); similar to Os02g0802200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048420.1); similar to Glycoside hydrolase family 79, N-terminal [Medicago truncatula] (GB:ABE87280.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 0.821479750927196 7.79264620043643 1.05871737010167e-05 0.0475258227438639 9.13045598072094 6.27169253217057 0.821479750927196 0.112889908268684 AT5G52070_at 5.63392136787249 6.054822635934 6.17059831126305 6.19027707006564 6.2645248131824 5.49688112957832 4.70940059235541 4.43188990507154 4.57168520394027 4.52674391995473 3.31765321008676 3.84777974691375 3.90922009369898 3.95516683529046 2.95511875197980 3.82000948743178 4.07605704990088 3.66456337448669 4.85105145184625 0.255863080613789 0.250848843010778 0.260764123753111 0.243618304467471 0.250332310862324 0.253449938941051 0.259113384931797 0.243165801991983 0.244662082568769 0.243165801991983 0.245448346549184 0.245964104240119 0.247874410470857 0.251474673624785 0.249325838368379 0.243165801991983 0.243165801991983 0.243216886906576 0.243165801991983 5 5|0 +|/ 21181008 21181908 21181334.222 21178537 21182251 + gene protein_coding_gene TRUE TRUE AT5G52070.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G42670.1); similar to Os05g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054599.1); contains InterPro domain Agenet; (InterPro:IPR008395) -0.979618851783879 -7.78149308089898 1.07265451474175e-05 0.04814073462161 9.12109636205615 9.79055094181738 -0.979618851783879 0.158968784456165 AT5G06610_at 4.59538281424585 5.16306307800925 5.5698069942376 5.98448241928787 6.10882935035029 5.50670335895183 2.64877195307604 2.20669899469033 2.69734213694816 2.28766190323608 3.77674939970776 3.99283164427616 3.37909227115045 4.14859315842098 4.24881992869349 3.71154647488429 3.95830587571745 3.8901044356097 2.4294881901309 0.238023958094617 0.232391334624112 0.236477928591575 0.242042686716025 0.234169599235930 0.232391334624112 0.238842731088234 0.251479505410155 0.247135050303074 0.241371630424515 0.232391334624112 0.234149487139954 0.237219949741472 0.237407859218001 0.234538259468388 0.232391334624112 0.23621100856369 0.242211579197117 0.242708940612442 5 5|0 +|/ 2031737 2033571 2033093.2 2029898 2033724 + gene protein_coding_gene TRUE TRUE AT5G06610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27690.1); similar to Lipase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99131.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) 1.04729520160826 7.76146067878893 1.09818740421944e-05 0.0492756688273262 9.10424226163034 7.90284377468742 1.04729520160826 0.177514004734314 AT5G44670_at 3.15534947707502 4.39406977479939 3.53006033353132 4.07711101876783 3.32760146981609 3.64021513102328 5.61707587277238 6.08705614282113 4.11270779634635 4.9832281672075 5.11147008413751 6.0285101417065 5.46714343751054 5.5387310635391 5.01738749689001 5.42476274949913 4.24930807232492 4.88927269051279 5.92353585024458 0.264603535673214 0.240704665274413 0.264052536170418 0.247092997882409 0.240217923223538 0.245263952566362 0.245133612677130 0.242047355788522 0.24903177471153 0.241900717864601 0.245423156001774 0.240217923223538 0.244784732395313 0.256481305850697 0.244391783056445 0.244137481040548 0.263873988216849 0.243185459678969 0.246059751547487 5 5 - 18036445 18037395 18036780.091 18036132 18038612 - gene protein_coding_gene TRUE TRUE AT5G44670.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20170.1); similar to Os06g0328800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057533.1); similar to Os02g0712500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047907.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72474.1); contains InterPro domain Protein of unknown function DUF23; (InterPro:IPR008166) -1.35684361297974 -7.74866476742201 1.11483979911757e-05 0.0500117133884142 9.09344750913608 9.33972431338307 -1.35684361297974 0.253883706623005 AT5G56370_at 1.11413972930434 1.54115595969628 1.51285743772783 1.80715300343419 2.79190743010777 2.05729876726262 1.10973743748120 1.36693097171179 0.676879050655802 0.488701698421581 1.57330778345376 2.38146167013283 2.36395042573749 2.00679130150745 2.10431783381173 2.54833135945880 2.38383572761520 1.90700864611009 1.01215552545442 0.194742390664327 0.186355805050695 0.186355805050695 0.19562588186735 0.201004540762913 0.193718676558107 0.190701000763104 0.191710244663923 0.199635595633316 0.202898529855928 0.199274362975543 0.191222972738497 0.190012695867368 0.197522945163617 0.194742568729593 0.193845416723315 0.190894576747159 0.195640129559398 0.193489216654031 5 5|0 -|/ 22853533 22854084 22853861.556 22853208 22855167 - gene protein_coding_gene TRUE TRUE AT5G56370.1|AT5G56370.2 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56420.2); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE78248.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.985914111182077 7.74642265895679 1.11778561354986e-05 0.0501326847677112 9.09155371186831 3.10491643458526 0.985914111182077 0.161854793943055 AT5G39670_at 7.23346801045476 7.98211493472376 10.0357705405231 10.2675096416134 8.73020561700723 7.60636523072088 1.48648230940552 2.08319430288542 3.07534786355449 2.87053207270539 2.16482922553734 2.17179935724403 2.30978582112486 3.46330130181743 2.56869423326130 3.32722953629632 3.02943684453206 2.7684572800411 2.00911280018929 0.289323245909349 0.286523350376862 0.287688501296792 0.283365131974350 0.285485257924193 0.302669878580106 0.281362658132494 0.279165789600342 0.285727652255935 0.284177475594919 0.282750279104596 0.279896466639093 0.27973421446306 0.288832218881217 0.288755333189362 0.283778726563943 0.287801563915333 0.27843431765683 0.27843431765683 5 5 + 15900545 15900973 15900702.545 15900407 15901295 + gene protein_coding_gene TRUE TRUE AT5G39670.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G29000.1); similar to Calcium-binding EF-hand [Medicago truncatula] (GB:ABE80363.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 1.36911945508649 7.70446752047451 1.17448746774719e-05 0.0526640180537841 9.05598759099557 9.6166917961492 1.36911945508649 0.258614411535249 AT5G16000_at 4.47363368674509 5.21546852889058 3.31816329402257 3.46638264365815 4.65557786642224 4.31525016315201 5.3334407553119 5.44451194901234 5.72344569326117 5.63619958734004 7.98495708393498 7.97217749010448 7.00017540516404 7.25285639546573 7.62357072175886 6.50747815714753 4.97854728239568 6.72670863605296 5.7591334871477 0.311593332903491 0.312852233713733 0.330272578544865 0.320791773959013 0.311919297437172 0.325182062892404 0.310212734607712 0.310212734607712 0.31794154531392 0.310212734607712 0.314425957216388 0.315367700252634 0.310212734607712 0.31831856607709 0.319745392712221 0.310212734607712 0.330314132042897 0.312355178315547 0.310212734607712 5 5 + 5226431 5226981 5226672.636 5224146 5227291 + gene protein_coding_gene TRUE TRUE AT5G16000.1 NIK1 (NSP-INTERACTING KINASE 1); kinase similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G23950.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G30520.1); similar to NIK2 (NSP-INTERACTING KINASE 2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G25560.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96908.1); similar to leucine-rich repeat receptor-like kinase [Populus tomentosa] (GB:ABG73621.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96874.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.91716619788323 -7.68988038191052 1.19492306684914e-05 0.0535684010868468 9.04356438695368 10.8838378537782 -0.91716619788323 0.144834209633418 AT5G45550_at 7.4042312377376 7.28747073353432 8.56796864893165 8.92314947525182 8.72739749632474 8.4080985898743 6.75678735521492 6.61627989261723 7.60456868774813 6.7096729225915 9.18423890329196 8.61975702568288 8.41034981987457 8.78849080485438 8.98111321606085 8.66447271853079 8.7912689011412 8.55889812222507 6.81703210478468 0.173793414170373 0.167442059566211 0.178053570983121 0.171162386281808 0.166509892833516 0.177921494951593 0.175484642088687 0.170835115260234 0.167255870102746 0.191192617037303 0.167768283212467 0.164970199715038 0.179452293669620 0.168287508772041 0.179160287651804 0.164553819205538 0.172904309692553 0.171206387726795 0.180372586654506 5 0|5 /|+ 18480558 18481646 18480989 18479389 18482317 + gene protein_coding_gene TRUE TRUE AT5G45550.1 mob1/phocein family protein similar to mob1/phocein family protein [Arabidopsis thaliana] (TAIR:AT4G19050.1); similar to Mob1-like protein [Medicago sativa subsp. falcata] (GB:CAC41010.2); similar to Os03g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050541.1); contains InterPro domain Mob1/phocein; (InterPro:IPR005301); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 0.736584110485357 7.65641659988298 1.24326850880409e-05 0.0557232945645995 9.01495231762143 15.7332137256854 0.736584110485357 0.0884917986207476 AT5G41260_at 6.45677496542956 6.75601890177594 7.78399920989743 7.78089175281229 9.04158570115273 7.70477286529265 4.40970098621419 4.29713542732665 4.79084034675713 4.31504846024542 6.76303727146505 6.27181889660236 6.81855885175885 6.80784219132308 6.65891962027079 6.48746429180283 5.98207264905084 6.48986982666088 4.42356560741860 0.270337631844888 0.268825970402892 0.268389454661682 0.273819042715991 0.273829526200905 0.269757847824775 0.270053069311953 0.277817257563391 0.29274563473085 0.271543681416713 0.269447228861644 0.27102073257805 0.271571573705631 0.27731310862075 0.272642366030447 0.268986114760939 0.284737820765515 0.282310968943869 0.27797980307715 5 5|0 +|/ 16523070 16524061 16523497.6 16521002 16524703 + gene protein_coding_gene TRUE TRUE AT5G41260.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G63500.1); similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82930.1); similar to Protein kinase [Medicago truncatula] (GB:ABE92129.1); similar to H0913C04.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86160.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 1.27250960071466 7.64787399755266 1.25594556355482e-05 0.0562789207028916 9.00762307867356 12.3012430202413 1.27250960071466 0.237866525063173 AT5G67630_at 2.49900109660648 2.76340087630062 4.19204193041642 4.08681476477641 3.80459488524016 3.49008351387611 2.57767421388943 2.71739566835967 2.52113722359239 1.37953046471281 3.33738743738277 2.74967996580616 2.57230839406690 2.59789887389321 3.11348136609557 2.72273859706877 2.8913853673372 2.17778703200146 1.73768765471657 0.231509010412646 0.228804834193944 0.244871291690877 0.232175556549685 0.231180356968473 0.236375521071739 0.229114402903706 0.228795224237890 0.24677746675867 0.243494878860025 0.229512682387333 0.226130626007853 0.228977660310277 0.230547924015689 0.231120050555608 0.228761454511132 0.233903423038363 0.229333887824755 0.24457242313025 5 5 - 26984936 26985287 26985127.182 26984607 26986620 - gene protein_coding_gene TRUE TRUE AT5G67630.1 DNA helicase, putative similar to DNA helicase-related [Arabidopsis thaliana] (TAIR:AT3G49830.1); similar to putative DNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD72453.1); similar to RuvB-like 2 [Xenopus tropicalis] (GB:CAJ83917.1); similar to LOC398205 protein [Xenopus laevis] (GB:AAI23266.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.707077855129633 7.6456541275301 1.25926259733864e-05 0.0564149643607709 9.0057168316166 5.59126844879004 0.707077855129633 0.0772799986528696 AT5G56380_at 5.4915346533016 5.31342970865813 5.57349766511003 5.52329373747644 6.43910324907748 5.95660976205768 5.0652909517232 4.93502384890402 5.45856791636201 5.8620276457628 4.81828849874981 5.1119169882584 6.15312209014105 5.91764418576545 5.54392687739192 6.85710559193047 6.1971599277843 5.54194471622121 6.4583897812373 0.193749839981873 0.183246479827288 0.199294359652936 0.18675074390727 0.195696701174454 0.192317466024309 0.186779734696593 0.185171005849176 0.197658773405827 0.185673999721506 0.193187672491131 0.183538947504894 0.187588317327052 0.188916510053155 0.186109975612741 0.183246479827288 0.203037240750863 0.194781829542306 0.183246479827288 5 5 - 22856071 22856817 22856437.636 22855898 22858241 - gene protein_coding_gene TRUE TRUE AT5G56380.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G32375.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE92019.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.745599950158183 -7.64549095704895 1.25950678709254e-05 0.0564149643607709 9.00557668648054 11.3842064756974 -0.745599950158183 0.0922255192876093 AT5G66850_at 5.51486084831545 5.28013759230849 6.9781438196689 6.87947291478618 5.87251971650039 6.58391187563178 3.90950526417433 4.26923182054909 5.41959441151892 4.37374799449899 6.69274133338814 6.96703402267694 6.19560793085049 6.68916655737683 6.69197479078457 7.41401476222659 6.84131000222839 6.27578101249813 4.39420738938976 0.220110677263509 0.220477783339963 0.222719562700031 0.224489673121216 0.219884770280261 0.220432683801952 0.216062849523351 0.222739976920446 0.227387572701329 0.227528884645917 0.220798065421856 0.217814049447434 0.222800278151421 0.217456904430914 0.221956253151425 0.219872133340497 0.219573868997780 0.22676159136266 0.220500627966694 5 5|0 -|/ 26713224 26714078 26713666.1 26712833 26716550 - gene protein_coding_gene TRUE TRUE AT5G66850.1 MAPKKK5 (Mitogen-activated protein kinase kinase kinase 5); kinase member of MEKK subfamily similar to YDA (YODA), kinase [Arabidopsis thaliana] (TAIR:AT1G63700.1); similar to HA-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06425.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.91117755849833 7.64007885687882 1.26763519584493e-05 0.0567647040699358 9.00092617562895 11.3860415148116 0.91117755849833 0.144820281664761 AT5G11960_at 7.44394227544427 7.50083194099692 8.9189983676642 8.92939704995533 9.12280299931317 8.81811014057934 7.29534113316438 7.29175402412559 6.32742299961837 5.96787377249035 8.05347487639895 7.85498185204882 8.28540128958438 7.96399251714482 7.5408112593007 7.958510084591 7.95087197262794 7.78996955268782 6.4373681477227 0.204009015543761 0.203185983351918 0.197674746318085 0.197803431203439 0.196476891868675 0.200065563369171 0.202321263222565 0.193058565163324 0.20599908152462 0.199920981766149 0.19720874004538 0.19716065456306 0.193058565163324 0.202373658401871 0.203748402545761 0.205312804889466 0.208067143908957 0.202981091658293 0.203242268310243 5 5 - 3859266 3860647 3859914.3 3858580 3861516 - gene protein_coding_gene TRUE TRUE AT5G11960.1 similar to permease-related [Arabidopsis thaliana] (TAIR:AT4G13800.1); similar to hypothetical protein MtrDRAFT_AC152551g11v1 [Medicago truncatula] (GB:ABE86250.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 0.656178944798417 7.63614409585678 1.27358033438512e-05 0.0570181915704216 8.9975425229816 15.2496338991513 0.656178944798417 0.0536735036999232 AT5G01990_at 5.13769091818098 5.69196460416111 6.31259871001633 6.43966120626114 7.07205768539194 6.61620636192746 4.34986162713714 4.41253838879318 4.82444363749182 4.07346380096474 6.06011768046866 6.621631150024 5.69494509856923 6.7866092098177 6.25235913073177 6.75722917229986 6.19236720665294 6.09911464929589 4.14590364120233 0.218336382790848 0.223931964484449 0.235973666488482 0.22650579791383 0.223302395844601 0.231004455265839 0.22765800538977 0.219519199467091 0.222322765842438 0.227110469171535 0.219532482372192 0.221939277791698 0.21948020269142 0.226295671863789 0.221357201364943 0.218458233654010 0.235622191625564 0.230137328200554 0.23079565159002 5 5|0 -|/ 377438 378166 377707.111 377228 379908 - gene protein_coding_gene TRUE TRUE AT5G01990.1 auxin efflux carrier family protein similar to auxin efflux carrier family protein [Arabidopsis thaliana] (TAIR:AT1G71090.1); similar to Os01g0818000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044627.1); similar to auxin efflux carrier family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD73344.1); contains InterPro domain Auxin Efflux Carrier; (InterPro:IPR004776) 0.848507575957352 7.63427978796107 1.27640766923021e-05 0.057132007274744 8.99593857091635 11.0820642821264 0.848507575957352 0.126589575586328 AT5G22390_at 7.78171638309119 8.00328876342255 8.07049276905152 8.31018409054577 7.94980278267439 8.08386978410403 9.09815521812946 9.3603306319665 8.49037933983552 8.48400376129046 9.2408701584443 9.36404184304874 9.20383385934793 9.3087458697554 8.56463438907627 9.75696269517096 9.19519644882128 8.9772017844265 8.49552495706055 0.132415543713049 0.134074452354986 0.138019845630745 0.135001174606768 0.132331433575003 0.140700849815343 0.130246568730934 0.133269668978374 0.141135249716829 0.140026339973595 0.132293742599346 0.136271808408020 0.129965811136517 0.132472311613533 0.136710425506115 0.140135473557019 0.145432841373858 0.135388151632359 0.145644808735956 5 5 - 7418434 7418959 7418697.727 7418119 7419252 - gene protein_coding_gene TRUE TRUE AT5G22390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19260.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28434.1); similar to Os12g0155100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066192.1) -0.702852001248547 -7.6311533840259 1.28116426554679e-05 0.0573321008832189 8.99324767803177 17.1779326697433 -0.702852001248547 0.0760764044212372 AT5G20830_at 9.04415913505312 9.02508842611897 10.2276686750072 10.1775468837830 9.792396252268 9.74684964684456 8.20436463358229 8.51126488835508 6.77610728593695 7.87109751822795 9.39854416343113 9.00879635057001 8.94955889579522 8.85313844817106 8.83640624183204 8.77076461311875 9.18466824453421 9.39356050077726 7.61129145546412 0.0985553923149945 0.0991066738353676 0.103663862895243 0.105481505824333 0.0986926778619018 0.0978708485622146 0.111780325755818 0.099661850252834 0.140843676665847 0.103640115131585 0.101396638905897 0.0970344882656592 0.0970344882656592 0.102494819409425 0.099300787555758 0.0970344882656592 0.101246498033797 0.106275497722427 0.107206101920509 5 5|0 -|/ 7050748 7051263 7051072.7 7050228 7055197 - gene protein_coding_gene TRUE TRUE AT5G20830.1|AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase Encodes a protein with sucrose synthase activity (SUS1). Identical to Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) (SUS1) [Arabidopsis Thaliana] (GB:P49040); similar to SUS2 (SUCROSE SYNTHASE 2), UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G49190.1); similar to SUS4, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G43190.1); similar to SUS3, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02280.1); similar to sucrose synthase [Citrus unshiu] (GB:BAA89049.1); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (GB:P49040); similar to Sucrose synthase (Sucrose-UDP glucosyltransferase) (Nodulin-100) (GB:P13708); contains InterPro domain Sucrose synthase; (InterPro:IPR000368); contains InterPro domain Sucrose synthase, plants and cyanobacteria; (InterPro:IPR012820); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.656912014852453 7.62748574945377 1.28676870330488e-05 0.0575700317858603 8.99008919090175 17.5756315353707 0.656912014852453 0.0544883558305729 AT5G46070_at 5.95782244152609 5.96231755424518 6.54672548698352 6.67130268349733 6.98328812718594 6.93648697417456 5.55392527918087 5.70075208415645 4.63744425444469 4.63872221399517 7.22805775402148 7.40961077095488 7.0922294963328 7.23288679004942 6.90026294016407 7.3414645012677 6.9170736973075 6.47501829330831 4.95240984953837 0.171239142026549 0.172022895973547 0.171133008988853 0.169837945168695 0.170371974537239 0.169604532318182 0.172143344867550 0.178289332866828 0.191860440295659 0.186530651856242 0.172040714215708 0.174241133454751 0.175305694657961 0.171369707784636 0.169316505174946 0.173932825675427 0.175604965274354 0.174590951346148 0.186153707928776 5 5 + 18705036 18705543 18705247.636 18700591 18705934 + gene protein_coding_gene TRUE TRUE AT5G46070.1 GTP binding / GTPase similar to guanylate-binding family protein [Arabidopsis thaliana] (TAIR:AT1G03830.1); similar to Guanylate-binding protein, N-terminal domain containing protein [Tetrahymena thermophila SB210] (GB:XP_001018996.1); similar to Os02g0307000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046641.1); contains InterPro domain Guanylate-binding protein; (InterPro:IPR003191) 0.6251120690699 7.61437496466055 1.30702039424741e-05 0.0584630222346866 8.97878293631398 12.1977947304113 0.6251120690699 0.0343015745694191 AT5G27520_at 5.92508792991759 6.39790175506297 6.84474923804157 7.37054277283478 7.68527132469823 6.81587104099456 4.10465287409283 4.11474289546159 3.14790605840146 2.63820420568425 4.85248723877791 4.78975936964126 5.6083008423226 5.08309644593731 4.27252504165481 4.8133558951761 4.98005119569295 4.99744052157920 2.99559091409725 0.260731314871159 0.263667178391232 0.276022607921145 0.263286158469279 0.263949708065281 0.265102535052191 0.257856390168194 0.258631620079021 0.269335384054221 0.265053720705793 0.258107213801285 0.257866556983278 0.257856390168194 0.264716694396963 0.260217593509524 0.257856390168194 0.268186065260230 0.266794909128542 0.260094393432864 5 0|5 /|- 9714718 9715312 9714965 9714385 9716357 - gene protein_coding_gene TRUE TRUE AT5G27520.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G05290.1); similar to Os05g0392700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055452.1); similar to Mitochondrial FAD carrier protein (ISS) [Ostreococcus tauri] (GB:CAL50155.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 1.08744888229939 7.59238253697265 1.34176776036607e-05 0.0600038542435705 8.95976286401984 10.0832828763424 1.08744888229939 0.193942510460126 AT5G13200_at 8.61117985133741 8.67091340777573 9.48028917244266 9.41252852526496 9.23814173200017 9.12974367560447 6.76682216499341 6.60798730838349 3.98465097149217 4.91213974240802 5.74728588003588 5.94303273059123 6.88052368600891 6.55545307364402 5.15427982874541 6.22717199604233 6.74382784019407 6.24808917735788 4.64404525572811 0.244171269163660 0.245967261580299 0.247447592249018 0.248483575441607 0.247128436699659 0.245553451409166 0.244256135497571 0.242948047463543 0.272602597034288 0.261231641966697 0.249471388673205 0.248395521153407 0.242948047463543 0.253823495673116 0.246877193017092 0.24474575633227 0.271620238503252 0.248096695786642 0.266779779042904 5 5|0 +|/ 4207327 4208036 4207648.7 4207007 4208292 + gene protein_coding_gene TRUE TRUE AT5G13200.1 GRAM domain-containing protein / ABA-responsive protein-related similar to GRAM domain-containing protein / ABA-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G22475.1); similar to ABA-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98234.1); contains InterPro domain GRAM; (InterPro:IPR004182) 0.626058600479075 7.58870838834286 1.34766936623605e-05 0.0602542973644137 8.95657860453023 13.8402357379521 0.626058600479075 0.0367667873299313 AT5G38210_at 5.4265029475062 5.55503579810839 7.35886174297556 7.67663717664428 6.69042512315347 6.01514068826428 4.06438439913913 4.07706168355067 3.49704068171369 3.24027382185559 4.99548623588374 4.87049504173673 4.9611789000623 5.19253839366079 3.91680620197709 5.08587199910208 5.23165129795788 3.78080032788309 3.31772180067522 0.256577475367034 0.251662939884508 0.253499837000953 0.256592010060476 0.254662015060779 0.254818941008932 0.248502341314927 0.250940283757055 0.260818697369375 0.258254824710206 0.253988909629124 0.248502341314927 0.248502341314927 0.257631244987349 0.252703854286799 0.248703166936551 0.250348631355323 0.249899137712859 0.257799427417278 5 5 + 15282050 15282582 15282309.364 15278235 15282860 + gene protein_coding_gene TRUE TRUE AT5G38210.1 serine/threonine protein kinase family protein similar to serine/threonine protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66880.1); similar to wall-associated kinase 4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82479.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.857158505178548 7.57928748179151 1.36293008487496e-05 0.0609229747939105 8.94840506415905 9.91102235384997 0.857158505178548 0.131073537793395 AT5G17860_at 6.93758842485696 7.59729560712411 9.00143569353575 9.20677800453177 9.16117273652589 8.7243030655301 5.97660233241586 6.72356484847737 5.8279035635569 5.31018635539476 6.33548542243341 5.72448798846822 6.74841399796397 7.23554104221714 6.6894392833575 8.86430943251838 7.65508305987811 7.06485236708422 3.97058450056499 0.25565981862733 0.243003947691725 0.249446293193878 0.249395024177130 0.253015116855127 0.246271482334063 0.251981697257497 0.245216138298344 0.246088492876086 0.25119380462843 0.249595572443487 0.243003947691725 0.247224286784109 0.248805350644752 0.247899083631026 0.244845125985623 0.254564955862511 0.252387021168397 0.246567781056758 5 5 - 5902653 5903199 5902925 5902396 5904382 - gene protein_coding_gene TRUE TRUE AT5G17860.1 cation exchanger, putative (CAX7) similar to cation exchanger, putative (CAX8) [Arabidopsis thaliana] (TAIR:AT5G17850.1); similar to Sodium/calcium exchanger membrane re (GB:ABE92415.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) 1.07539174001793 7.57067819433495 1.37703923112898e-05 0.0615398832391543 8.94092464468185 13.9540557794976 1.07539174001793 0.191629200050833 AT5G38895_at 6.82773192602881 7.03770892127328 8.72114956275624 8.62887707790941 8.69302048267264 8.6222751842005 6.0707330886664 6.26423782170489 5.25619177674616 5.44760020911137 6.18791713736999 6.12292461937651 6.97462552412615 6.41488332941793 6.26680870855025 6.69440270799612 7.52332395860162 7.15241750409428 5.50652007595613 0.210251182961768 0.205228561198862 0.214231270971663 0.217175718513174 0.217796564114252 0.218732231637022 0.201676779056212 0.200429752927342 0.210183409939348 0.20545457187278 0.204426388172512 0.208070476305444 0.200429752927342 0.208082474815031 0.201094748289935 0.200429752927342 0.202112690853176 0.20560296698598 0.212054263544073 5 5|0 +|/ 15589386 15590218 15589634.889 15588733 15590756 + gene protein_coding_gene TRUE TRUE AT5G38895.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02290.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96894.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.649733616788932 7.56776419640885 1.38185040900371e-05 0.0617410762742859 8.93839034631248 13.6435169032163 0.649733616788932 0.0533540548041505 AT5G25190_at 5.44104869052098 5.10428720610708 5.05319063416005 5.6330234690269 8.27376008633686 8.11850885141298 4.50655316971286 4.99158290299949 8.64977372028995 6.56283410493695 10.5682603782947 9.88011572417267 9.66151632283277 9.93505959002068 10.2435079475601 9.51974873815655 8.44740976091719 9.4496328640956 7.7189299079855 0.244061044663360 0.240646031573569 0.238271419663263 0.233217885365789 0.22053488211702 0.22053488211702 0.232319051891535 0.228961867725194 0.225669427577766 0.238946680186692 0.222690535224730 0.22053488211702 0.222509217152283 0.222163412247275 0.22475482323306 0.22053488211702 0.230109976449938 0.220558806634760 0.221053210738833 5 5|0 -|/ 8707040 8707629 8707336.9 8706793 8707751 - gene protein_coding_gene TRUE TRUE AT5G25190.1 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to SHN1/WIN1 (SHINE1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G15360.1); similar to ethylene response factor 1 [Lycopersicon esculentum] (GB:AAL75809.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.905615342102075 7.5674092294776 1.38243771796033e-05 0.0617534928612879 8.93808154961616 14.5687455396982 0.905615342102075 0.145712767022402 AT5G18240_at 7.77405496236269 7.92981424906423 8.31490632676047 8.36140289831313 8.5002159680816 8.328327903868 8.28926806768554 8.41703178912433 8.18410471927073 8.08949417265516 8.002114732588 8.1692237559448 8.52081965559799 8.13999294140037 7.96950086715661 8.78307701218967 8.76839538614674 8.48046576016949 8.16671735729138 0.127670349024695 0.125117117476444 0.134304754250877 0.128262374011062 0.128523801881581 0.126342435999654 0.128971093524644 0.128599026148616 0.127319558082586 0.124440903072063 0.125216387543352 0.122650107997601 0.127851956094560 0.133182394070321 0.129019493088372 0.125649015526664 0.127725215904598 0.123935211972034 0.127335329619020 5 5 - 6028645 6029191 6028942 6028287 6030804 - gene protein_coding_gene TRUE TRUE AT5G18240.1|AT5G18240.2|AT5G18240.3|AT5G18240.4|AT5G18240.5 MYR1 (MYB-RELATED PROTEIN 1); transcription factor|MYR1 (MYB-RELATED PROTEIN 1) Encodes MYR1 (MYR1). similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G04030.2); similar to Os03g0325500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049984.1); similar to transfactor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83815.1); similar to Os05g0488600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055886.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G04030.1); similar to Os03g0325500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049984.1); similar to transfactor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83815.1); similar to Os05g0488600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055886.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.63728992695636 -7.55608211030374 1.40132110300223e-05 0.0625830004600794 8.92821830760852 16.4898631941433 -0.63728992695636 0.046529492201281 AT5G59010_at 2.80978378025879 3.10454092338004 3.4836053457051 3.59655623080598 3.78755514720691 3.82265602038611 2.42324198277086 2.21838506969468 2.15060423300459 1.72403197859449 3.57648260068598 3.41926435337275 2.94644554086576 3.09858687045790 4.35769556011982 2.94556506517367 2.65729580639616 3.45229083733612 2.62060268707503 0.2362956581948 0.231553741178577 0.232263783889639 0.234701867995282 0.241109930621498 0.247662979996168 0.236992010543972 0.231553741178577 0.241202230591769 0.241872610491923 0.236273666625292 0.231553741178577 0.232812637795856 0.234515838539285 0.243784824739364 0.238498104365577 0.238042846439432 0.234898109514370 0.234853840364924 5 0|5 /|- 23837851 23838482 23838116.111 23837594 23840491 - gene protein_coding_gene TRUE TRUE AT5G59010.1|AT5G59010.2 protein kinase-related|ATP binding / binding / protein kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G41260.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54030.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00710.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82930.1); similar to H0913C04.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86160.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G54030.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.671970444391904 7.55445141667399 1.40406246347315e-05 0.0626913889940762 8.92679685204998 5.89168204362225 0.671970444391904 0.0654041556439222 AT5G18690_at 1.24900733524640 1.29860874545996 2.03384585611639 1.57492765994087 1.58850052642914 1.78487961031677 1.36118401903307 1.52913889864930 2.59107712905305 2.11545528121833 4.09452672248651 4.11859307238286 3.81582962559632 3.94016118402555 4.93169442934641 3.28200854581943 2.92387155342651 3.86893421778927 2.26067989950476 0.255921053770544 0.256268418516855 0.255114972367207 0.253563686173940 0.26409845942155 0.257511712248015 0.259200243681858 0.25640444382836 0.255123386928957 0.25935737197866 0.273026950229700 0.263635973935347 0.252575443047627 0.261005367248280 0.273499578212507 0.254790379591966 0.260240083597871 0.257420627185023 0.253300767217309 5 5 - 6233916 6234103 6233994.636 6233521 6234208 - gene protein_coding_gene TRUE TRUE AT5G18690.1 AGP25/ATAGP25 (ARABINOGALACTAN PROTEINS 25) Identical to Classical arabinogalactan protein 25 precursor (AGP25) [Arabidopsis Thaliana] (GB:Q6NN00); similar to AGP27 (ARABINOGALACTAN PROTEIN 27) [Arabidopsis thaliana] (TAIR:AT3G06360.1); similar to Os01g0937900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045338.1) 0.732337843766034 7.52821474494454 1.44897368225145e-05 0.0646821851757048 8.90387441606667 4.6496898424579 0.732337843766034 0.0915457203594418 AT5G12340_at 1.77833174949945 2.25464428535456 4.37554406852239 4.97883886931918 1.62948807166215 1.70565465492426 0.742409186146915 0.732180903074063 0.571070933955893 0.450194726626932 0.31124153152617 0.486768094323732 0.712953166761636 1.22239461444612 0.755358412251968 0.812081263499609 1.12734847164366 0.805641874760395 0.927392289604334 0.227633992422425 0.222869652837000 0.246130650207680 0.241812300119193 0.223073478027217 0.246051988241631 0.232060191376527 0.222869652837000 0.232479386009739 0.231118873972901 0.226804248032087 0.222869652837000 0.229619680932911 0.222869652837000 0.229958417802794 0.232070220075108 0.238016897290392 0.22606953078992 0.227649130060021 5 5 - 3993014 3993449 3993266 3992949 3993611 - gene protein_coding_gene TRUE TRUE AT5G12340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G28190.1); similar to putative protein [Medicago truncatula] (GB:ABE89838.1) 0.858298959167366 7.51303741559483 1.4756595493241e-05 0.0658586856863345 8.89056927847085 2.98902451291989 0.858298959167366 0.133683379714912 AT5G60860_at 7.05902946858477 7.37327762427121 6.4172940988962 6.45451726906891 7.64334599006777 7.40676230606328 7.40545024597893 7.82582735472024 9.42392222046728 7.86934832195507 10.4098381300421 9.3980285580658 9.17813172713087 9.72844914898285 9.93779466999088 8.76640026464619 7.50547129629249 9.39962856187657 8.34423646975844 0.162849988360237 0.170057556724575 0.181159933445318 0.169195956887819 0.163420877373116 0.181587242792079 0.16697484683288 0.158600990402462 0.164208138502175 0.171619777048933 0.158600990402462 0.158600990402462 0.158600990402462 0.160055427541933 0.161304475038250 0.159972464417329 0.166856377441714 0.162394793818015 0.165013051240608 5 5 + 24502033 24502705 24502476.273 24501848 24502931 + gene protein_coding_gene TRUE TRUE AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding similar to AtRABA1g (Arabidopsis Rab GTPase homolog A1g), GTP binding [Arabidopsis thaliana] (TAIR:AT3G15060.1); similar to GTP-binding protein [Pisum sativum] (GB:BAA02112.1); similar to Os05g0564400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056333.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) -0.753158828225771 -7.50793475047347 1.48475012892590e-05 0.0662495507526736 8.8860886205187 16.1163397773841 -0.753158828225771 0.0998371269930408 AT5G42070_at 9.56397399704473 9.54394305521952 9.62517482347768 9.70164396572157 9.81236879533439 9.65496955071377 10.4799345677936 10.6626838831757 10.2212887989867 10.2664514022791 10.6634272264573 10.6700363710660 10.5402549997805 10.7256665596584 10.8469941662077 10.6685819018152 10.1591414875237 10.4954496957375 10.0580030155254 0.0716441810584872 0.069497699868073 0.0732137266334786 0.0719434874417456 0.0719862967104907 0.0763122458252796 0.0703368597407217 0.0705498455124968 0.0743614561278159 0.0699151133416311 0.070480534128368 0.0713965834232415 0.070549797948796 0.0724520945194528 0.0701200434776296 0.0705970450912163 0.0758005301360564 0.07247448686057 0.069497699868073 5 5|0 -|/ 16836566 16837304 16836827.778 16836212 16837423 - gene protein_coding_gene TRUE TRUE AT5G42070.1 similar to Os01g0235100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042519.1); similar to Conserved Cys-containing protein (IC) [Ostreococcus tauri] (GB:CAL52359.1) -0.62841305763227 -7.49794715892202 1.50271870967835e-05 0.0670362816387513 8.87730766392663 20.2696408081241 -0.62841305763227 0.0439233747000397 AT5G01540_at 7.73422273855811 7.53269754353838 8.83717156862917 9.12662233429221 7.21054657087265 7.24979578811461 2.87247811599676 3.44819873628129 5.05409334476843 3.42566332909077 4.39276743716012 5.55418998759223 3.68408349277427 5.36640121520881 4.60852351281137 4.75013308479454 4.59283804167357 4.88028520648544 3.10194339706254 0.314833692893623 0.30308217451453 0.308045726852664 0.307276938806678 0.303206129715484 0.313806235885581 0.320277051590749 0.295821348951222 0.294514665510318 0.301052096232097 0.288928444810027 0.289661407079207 0.311048576579641 0.311550822432694 0.295446833649301 0.289661672447575 0.312766890680835 0.288928444810027 0.308303909086111 5 5 - 211289 211727 211463 210978 213471 - gene protein_coding_gene TRUE TRUE AT5G01540.1 lectin protein kinase, putative similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08870.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01550.1); similar to receptor lectin protein kinase-like [Cucumis melo] (GB:AAU04770.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.802724871525673 7.49413627530165 1.50963654489276e-05 0.0673297899022172 8.8739534013478 11.0460763933453 0.802724871525673 0.117037789502696 AT5G09820_at 5.911336300027 5.53131482487831 5.81445882018866 5.63070496793116 6.27065127543179 6.47886433317171 6.54686228905222 6.27265838622889 5.81955202702456 5.99002712819962 6.4767009873671 6.39080145728897 6.31831735635373 6.44065323841123 6.67528998731024 6.43681655201172 6.73562783600824 6.1345960179166 5.66473086850782 0.190564095969452 0.186568661572907 0.180977435815709 0.179231660753445 0.182048495822632 0.184176345677809 0.183664301796584 0.196248522485210 0.205948213934598 0.186536926035038 0.190064123407164 0.186549812846451 0.187905647694691 0.185794216737356 0.198524085940611 0.193382035007882 0.181135828936366 0.193059512117892 0.18869324498739 5 5|0 -|/ 3056565 3057231 3056860.875 3055780 3057448 - gene protein_coding_gene TRUE TRUE AT5G09820.1|AT5G09820.2 plastid-lipid associated protein PAP / fibrillin family protein|structural molecule similar to plastid-lipid associated protein PAP, putative [Arabidopsis thaliana] (TAIR:AT4G22240.1); similar to 52O08_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67556.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843)|similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to 52O08_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67556.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) -0.73130780325598 -7.44283777688887 1.60617783261677e-05 0.0716194695563816 8.82859734938781 12.1950416181108 -0.73130780325598 0.0942667143888654 AT5G40390_at 8.48722597572733 8.5817181493026 8.10594607474781 8.37514914394765 8.39124987983276 8.24946132763129 9.3920823871795 9.4076499712662 7.72719846902414 8.19711217852562 8.92459856935038 9.3822416126666 9.57405064041568 9.0197416164406 8.86167875575269 9.2546183951125 9.00600152473693 9.10564162565192 8.32651955603293 0.115863800940264 0.115033877971531 0.116422595908266 0.114714854747047 0.124439667895778 0.113792950572854 0.117154770559607 0.120036795425153 0.122797851165348 0.119120104358898 0.122908759682736 0.119104075325981 0.117769587876577 0.112898010396134 0.116256578289342 0.112293546390133 0.116724415462224 0.113387765931343 0.114704042217629 5 5 + 16181835 16182275 16182031.545 16178743 16182585 + gene protein_coding_gene TRUE TRUE AT5G40390.1 SIP1 (SEED IMBIBITION 1-LIKE); galactinol-sucrose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. similar to DIN10 (DARK INDUCIBLE 10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20250.3); similar to raffinose synthase [Cucumis sativus] (GB:AAD02832.1); similar to raffinose synthase [Pisum sativum] (GB:CAD20127.2); similar to Raffinose synthase [Medicago truncatula] (GB:ABE79689.1); contains InterPro domain Raffinose synthase; (InterPro:IPR008811) -0.640682913280637 -7.4242895091986 1.64270673464915e-05 0.0732318662306591 8.81210381640632 17.2361511938928 -0.640682913280637 0.0552002079377802 AT5G09870_at 8.52564622684372 8.7539573139508 8.41257645060652 8.77527069133482 9.05660841513975 8.56904978783815 10.2664174176122 10.278811487237 9.89046265232202 10.2918536781776 11.0019527015966 10.9541943028569 10.6720477416588 10.7110006080571 10.6609346111744 10.5428907310061 9.86420885201492 10.7486218282401 10.0146175594591 0.102418509277905 0.0990242265583015 0.112800483782738 0.103995060678566 0.101685374455195 0.111601255083357 0.0990152244820153 0.098921028112239 0.104489545929023 0.098921028112239 0.0997215839391766 0.0991623590684173 0.098921028112239 0.104549524404953 0.0998276041362243 0.098921028112239 0.098921028112239 0.101106374472797 0.0997074875876045 5 5 + 3077418 3077951 3077719.636 3073357 3078263 + gene protein_coding_gene TRUE TRUE AT5G09870.1 CESA5 (CELLULASE SYNTHASE 5); transferase, transferring glycosyl groups Cellulose Synthase Identical to Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC 2.4.1.12) (AtCesA-5) (CESA5) [Arabidopsis Thaliana] (GB:Q8L778;GB:Q9FIB9); similar to CESA2 (CELLULASE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to CESA6 (CELLULASE SYNTHASE 6), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G64740.1); similar to CESA9 (CELLULASE SYNTHASE 9), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G21770.1); similar to cellulose synthase [Populus tremula x Populus tremuloides] (GB:AAT09898.1); similar to cellulose synthase [Populus tremuloides] (GB:AAO25581.1); similar to 52O08_12 [Brassica rapa subsp. pekinensis] (GB:AAZ67558.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.780471235700352 -7.4187783111057 1.65373237578446e-05 0.0737068519887135 8.8071934883253 19.4348552498513 -0.780471235700352 0.112357676951699 AT5G51460_at 3.18316613181827 3.42952861344154 4.11543664591320 3.91493282289676 4.99103343989437 4.09047974630448 7.19199763260361 7.00601312914867 5.90813687952986 7.050429658438 8.91510145683148 8.45822103416277 8.2952619050038 8.56310493632945 7.57174252939178 7.90661033562963 6.58434116021001 7.1996909820179 7.67401409474922 0.212621079979637 0.205856946300356 0.214884731366181 0.216487374475132 0.212352951997544 0.237059992145944 0.210839233641251 0.204516339759272 0.223693679986759 0.210330217349067 0.208250988566263 0.204955223932464 0.204516339759272 0.214637262919933 0.214969592577654 0.205014872251998 0.220647034361773 0.231835784468841 0.204851574175409 5 5|0 +|/ 20920345 20921342 20920784.125 20918203 20921765 + gene protein_coding_gene TRUE TRUE AT5G51460.1|AT5G51460.2|AT5G51460.3 ATTPPA (Arabidopsis thaliana trehalose-6-phosphate phosphatase); trehalose-phosphatase homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G12430.1); similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G22590.1); similar to trehalose-phosphate phosphatase [Nicotiana tabacum] (GB:AAU03490.1); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337); contains InterPro domain HAD-superfamily hydrolase subfamily IIB; (InterPro:IPR006379) -0.967289225879476 -7.41644536156962 1.65842366688059e-05 0.0738993585961991 8.80511356023215 12.1474666052623 -0.967289225879476 0.168360349744162 AT5G12980_at 5.15984527821817 5.1757790847423 5.7049895851323 5.40059275870977 4.66551363042446 5.26914617132192 4.99704168533363 5.43500443090478 4.48491219139842 4.49011425391301 4.41025160772311 4.75853601850589 4.35730563637211 4.53534945492297 4.84237825402374 3.90270671141043 4.49597758190558 4.57336263251457 4.43356928211615 0.208644278992509 0.204892931997293 0.205317582639806 0.213752356059837 0.207856130941432 0.205807620371753 0.205970174509583 0.207490978152179 0.213523313392946 0.209889626925238 0.213714073105564 0.207535259836088 0.208406066966655 0.204892931997293 0.208560089180044 0.206424405012822 0.207660143319188 0.208435579768042 0.210291596554829 5 0|5 /|- 4105584 4106725 4105962.5 4105386 4108187 - gene protein_coding_gene TRUE TRUE AT5G12980.1 rcd1-like cell differentiation protein, putative similar to rcd1-like cell differentiation protein, putative [Arabidopsis thaliana] (TAIR:AT3G20800.1); similar to Os04g0613400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053854.1); similar to PREDICTED: similar to rcd1 (required for cell differentiation) homolog 1 [Apis mellifera] (GB:XP_623701.1); similar to Os03g0784800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051477.1); contains InterPro domain Cell differentiation proteins, Rcd1-like; (InterPro:IPR007216) -0.86474539151106 -7.40322977617498 1.68527103766977e-05 0.0750788247281884 8.7933162920656 9.70299677625583 -0.86474539151106 0.139423960367660 AT5G21060_at 6.54970753145114 7.03218051851926 6.43141635450162 6.76056305655557 6.44630613864427 6.39667642140691 6.96926481590893 6.89732425862038 6.45739590664994 6.45023236383767 7.07782676669185 7.9496556028533 7.1653960919957 7.49699246652308 7.54079111113075 7.66637376361691 6.99331175964273 6.83325276560616 6.28711609853807 0.187025512714790 0.183503639351913 0.185100482342101 0.185871735942468 0.189491372226985 0.183355936143998 0.190913846747194 0.185057591369304 0.197333488685592 0.185345638457542 0.185376089996186 0.185624884648713 0.184978682916155 0.189150639741721 0.192569799554459 0.185206314126524 0.192984300619529 0.188753785908927 0.183282257822022 5 5|0 -|/ 7149175 7150968 7149773.7 7148980 7152878 - gene protein_coding_gene TRUE TRUE AT5G21060.1|AT5G21060.2|AT5G21060.3 homoserine dehydrogenase family protein|homoserine dehydrogenase similar to AK-HSDH/AK-HSDH II [Arabidopsis thaliana] (TAIR:AT4G19710.2); similar to homoserine dehydrogenase [Glycine max] (GB:AAZ98830.1); contains InterPro domain Homoserine dehydrogenase; (InterPro:IPR001342) -0.747292512262272 -7.38358463713333 1.72604988189265e-05 0.0768782617394987 8.775732332826 13.5547789689591 -0.747292512262272 0.10219845512638 AT5G49030_at 8.44469997992667 8.17981647091246 8.36265267212425 8.04102532934326 8.68797901424423 8.31297820616447 8.87495652666787 8.64656494905145 8.5947688502139 8.70267369751588 8.74085601333242 9.2900106513284 8.71252304067549 9.02459808661728 9.47715569053955 9.26428877615302 8.76993690219267 8.97513817260071 8.8446416946412 0.110957268050416 0.114295184341101 0.115836666277609 0.120735241372633 0.111813030371570 0.116895587412192 0.10946110210433 0.111170637338061 0.122601697874005 0.115472363316745 0.110665291264992 0.109924926963131 0.113107021408670 0.115090807496249 0.116135066314848 0.110033383705154 0.117608405746332 0.112372130853936 0.116186488412809 5 5 - 19892335 19893750 19893039.636 19892170 19899688 - gene protein_coding_gene TRUE TRUE AT5G49030.1|AT5G49030.2 OVA2 (OVULE ABORTION 2); ATP binding / aminoacyl-tRNA ligase similar to isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putative [Arabidopsis thaliana] (TAIR:AT4G10320.1); similar to isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413] (GB:YP_324274.1); similar to isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120] (GB:NP_485116.1); similar to COG0060: Isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102] (GB:ZP_00106717.1); contains InterPro domain Zinc finger, Fpg-type; (InterPro:IPR010663); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain tRNA synthetase, valyl/leucyl, anticodon-binding; (InterPro:IPR013155); contains InterPro domain Aminoacyl-tRNA synthetase, class Ia; (InterPro:IPR002300); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080); contains InterPro domain Isoleucyl-tRNA synthetase, class Ia; (InterPro:IPR002301); contains InterPro domain ValRS-IleRS-LeuRS editing; (InterPro:IPR009008)|similar to isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putative [Arabidopsis thaliana] (TAIR:AT4G10320.1); similar to isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413] (GB:YP_324274.1); similar to isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120] (GB:NP_485116.1); similar to COG0060: Isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102] (GB:ZP_00106717.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain tRNA synthetase, valyl/leucyl, anticodon-binding; (InterPro:IPR013155); contains InterPro domain Aminoacyl-tRNA synthetase, class Ia; (InterPro:IPR002300); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080); contains InterPro domain Isoleucyl-tRNA synthetase, class Ia; (InterPro:IPR002301) -0.754411037228712 -7.3823037545884 1.72874540155250e-05 0.0769810327311329 8.77458387948352 17.3167548922895 -0.754411037228712 0.104751081528131 AT5G50420_at 5.84267762961198 5.89456503484947 5.021651397844 5.51093634092426 6.48099835372682 6.50574443471415 6.43155409596609 7.02779672033275 6.29826922955974 6.54919496927867 7.79998204747701 7.62051893620262 7.29347407050658 7.07290580410656 8.11680794006114 6.66791437197748 6.80299786735285 7.62874762479273 6.79439688197832 0.190194855050585 0.189074143906742 0.211537232363412 0.191787454756590 0.193566336148276 0.186607014065256 0.194386994500332 0.192745750932428 0.193906408423311 0.186631735616689 0.186757907346326 0.193393332207706 0.190618347479455 0.195378920246085 0.194599973607519 0.191421881904522 0.208221306206085 0.187092063195293 0.189946712517708 5 5 - 20547715 20548663 20548162.364 20547433 20550082 - gene protein_coding_gene TRUE TRUE AT5G50420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53770.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17270.1); similar to hypothetical protein MtrDRAFT_AC135796g16v1 [Medicago truncatula] (GB:ABE82081.1); contains domain FAMILY NOT NAMED (PTHR13398) -0.841828807605153 -7.3641880615357 1.76735846997363e-05 0.078682799083226 8.7583153824269 13.0508433058705 -0.841828807605153 0.133847428307762 AT5G10760_at 12.2507523019814 12.5762694030655 13.0158188770706 13.1489275379975 12.8450027026191 12.7563270450448 8.34272792104553 8.5168136409889 10.3682760276694 7.86725608011986 7.87820016875517 8.93420361433867 9.56036997404113 9.13684618483375 8.17514809226533 9.38401179941507 9.52619397348588 9.02020914757713 8.36175463679347 0.205567697720507 0.203836299478516 0.208077029550746 0.211813855216528 0.206047278040757 0.212260022498883 0.206467281172226 0.200772917739836 0.210044091425457 0.231400016597459 0.218765021517631 0.194440114775244 0.194440114775244 0.194440114775244 0.215480979447093 0.194440114775244 0.195618640988441 0.200442176491076 0.218679553001050 5 5 - 3400866 3401233 3401063 3400343 3402204 - gene protein_coding_gene TRUE TRUE AT5G10760.1 aspartyl protease family protein similar to chloroplast nucleoid DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G10770.1); similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] (GB:BAA22813.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.663555417945375 7.36041001905928 1.77552785671256e-05 0.0790287449022762 8.7549165013776 20.5904099874933 0.663555417945375 0.0696205835623034 AT5G08380_at 9.51133243140973 9.44541849470122 9.8544976053933 9.82829981059328 9.32554646838955 8.83034004196411 5.81793489985683 5.85594578810337 5.63264972735547 5.52645732356322 6.521117811183 7.49505577255664 6.48582836401883 7.08402613735957 7.61735007160494 6.9180459433075 7.40803981866254 7.66667870264286 5.56301032022549 0.193844988962201 0.195188777567732 0.195789035149065 0.196856510435051 0.195959422013597 0.193844988962201 0.208263745304096 0.193844988962201 0.196740891212522 0.1990731763976 0.193953541691113 0.193844988962201 0.197775035600747 0.197491772462321 0.195636657501763 0.193844988962201 0.201060134056207 0.194248959503636 0.203581820863952 5 5|0 -|/ 2694855 2695991 2695335.75 2694678 2697725 - gene protein_coding_gene TRUE TRUE AT5G08380.1 ATAGAL1 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 1); alpha-galactosidase similar to ATAGAL2 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 2), alpha-galactosidase [Arabidopsis thaliana] (TAIR:AT5G08370.2); similar to acid alpha galactosidase 1 [Cucumis sativus] (GB:ABC55266.1); similar to alpha-galactosidase 1 [Pisum sativum] (GB:CAF34023.1); similar to alpha-galactosidase [Carica papaya] (GB:AAP04002.1); contains InterPro domain Glycoside hydrolase, family 27; (InterPro:IPR002241); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111) 0.70163085305034 7.33709437580067 1.82685363749076e-05 0.081294986868339 8.73389431487018 14.9204429182423 0.70163085305034 0.086821923907834 AT5G05960_at 4.74558127044353 5.79001649219554 8.47512196882811 8.75610469597543 8.5558318652009 8.18034529023327 7.71720424536724 8.06574718911018 7.11717019854748 9.06757662130393 10.5149531632717 10.5039995766907 10.5769378739236 10.7100873185139 10.8935398044073 10.5086100038991 10.6110276076133 10.2600752340586 9.66893893537143 0.213854780095345 0.203915641806789 0.190080923705619 0.181334425486360 0.181095022181454 0.196748143448168 0.191914442137098 0.192873547833226 0.209326381618045 0.182521407581735 0.180573455877429 0.182028685610021 0.179967431138501 0.183920365740721 0.181018922739564 0.183478487480834 0.186717468947424 0.184915317727997 0.179340239671985 5 5|0 +|/ 1790260 1790546 1790428.3 1790232 1790834 + gene protein_coding_gene TRUE TRUE AT5G05960.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G53980.2); similar to hypothetical protein [Plantago major] (GB:CAH59408.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 1.10030083164885 7.33362850389475 1.83461880336969e-05 0.0816221905619176 8.73076252495365 17.1308936644384 1.10030083164885 0.207107363433650 AT5G41140_at 1.76841167171784 1.94475821703297 1.71802541075220 1.48266944060134 1.78854367637305 1.91926627725857 2.12521369782946 1.80677647219929 2.53451869926094 2.7966168667924 6.31051526686782 6.29522604656773 4.11676137776495 5.31627092397237 5.67406323438513 4.17801770073073 2.97639003645396 3.73946473717229 2.39305178643758 0.280549128518155 0.278104643323214 0.277633348883910 0.281228508317361 0.285053079150186 0.277633348883910 0.281463997188705 0.281316913384072 0.279550978919853 0.277987433678205 0.30701978207329 0.300962108893305 0.278493665775158 0.284313324716789 0.302397719786184 0.277633348883910 0.277633348883910 0.280056528432022 0.278602980906009 5 5 + 16488950 16489729 16489218.091 16485675 16490038 + gene protein_coding_gene TRUE TRUE AT5G41140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63300.1); similar to putative myosin [Oryza sativa (japonica cultivar-group)] (GB:AAO72668.1); contains domain no description (G3D.1.20.5.170); contains domain MYOSIN HEAVY CHAIN-RELATED (PTHR23160); contains domain Tubulin chaperone cofactor A (SSF46988) 0.679842064348965 7.32424077970543 1.85583095020753e-05 0.0825473606652308 8.72227079285083 5.51949199946376 0.679842064348965 0.0783502389857691 AT5G52310_at 10.6348891313396 10.5882084577401 10.3671726787914 10.1941912035967 10.6622269956149 10.5410389690094 9.30106984471297 9.36078323823811 6.77177511343725 8.19026620728343 9.6332030567281 9.30483723744285 9.91345972831708 9.61859421357548 9.1048615526619 10.7207081989531 9.56079028422797 9.73689698367555 7.54936176113047 0.134869532236404 0.132164771508034 0.130554017991328 0.129700208188498 0.135195292104389 0.135215570778745 0.133458181209188 0.129399111824198 0.176368919812575 0.158856345753871 0.137803781722685 0.133624408585526 0.129399111824198 0.138419432515278 0.146863132286195 0.130210830356437 0.142903013353665 0.133203956932805 0.167320824529243 5 5 + 21259953 21260519 21260289.818 21258075 21260839 + gene protein_coding_gene TRUE TRUE AT5G52310.1 COR78 (COLD REGULATED 78) cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression Identical to Low-temperature-induced 78 kDa protein (Desiccation-responsive protein 29A) (LTI78) [Arabidopsis Thaliana] (GB:Q06738;GB:Q04981); similar to RD29B (RESPONSIVE TO DESSICATION 29B) [Arabidopsis thaliana] (TAIR:AT5G52300.1); similar to cor78 (GB:AAA32776.1) 0.606149376436502 7.31571361050132 1.87532787994205e-05 0.0833958308210232 8.7145461916821 18.8076825319961 0.606149376436502 0.0388329048242131 AT5G36650_at 3.35275918941218 3.1621202095874 2.77334634251082 2.98623689907459 3.61035067340066 2.54264858222338 4.13724154538219 4.35820953423248 4.33469224790941 3.98229627096258 4.65465515410742 3.79305282735588 4.0503268493088 4.10945823546046 4.44124505463234 5.02405135641224 4.02180092317895 4.60144685454156 4.46530126318948 0.6996197039654 0.628606996657347 0.686591790825826 0.644627488879443 0.628606996657347 0.661914931399591 0.628606996657347 0.635095618392086 0.652304552420197 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 0.628606996657347 5 5 - 14397665 14397884 14397777 14397498 14397974 - gene protein_coding_gene TRUE TRUE AT5G36650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G13320.1) -1.04961681858561 -7.29907951884126 1.91399929879001e-05 0.0850964088242039 8.69944669773886 7.66424808075889 -1.04961681858561 0.195059569553648 AT5G12470_at 10.7894002300584 10.8085595800190 10.8059890294853 10.9171197105488 10.6661890562297 10.5736987615890 11.3875458605903 11.4946787248555 11.1400155735884 11.1948695176080 11.4745360188024 11.4842467033863 11.5103368710895 11.6399502071182 11.2100323462485 11.6531394559817 11.2893263672049 11.5107382585268 11.0965122254626 0.0744650789267968 0.071035830314771 0.0794974653171804 0.0743565982430455 0.072734648746341 0.0791903329831211 0.0750641200869994 0.0731873391968572 0.0758278653719534 0.0702547545750103 0.0699708289665323 0.0708321205213521 0.070207520710075 0.0702282185926459 0.072533468524386 0.0699708289665323 0.0761510623777297 0.0699708289665323 0.0714315690974437 5 0|5 /|- 4045094 4045958 4045352.571 4044625 4047439 - gene protein_coding_gene TRUE TRUE AT5G12470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40400.2); similar to Trimeric LpxA-like [Medicago truncatula] (GB:ABE84885.1); similar to Os01g0957200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045446.1); similar to Os05g0388600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055430.1) -0.595899838636227 -7.29874320121174 1.91478999105900e-05 0.0851124151025724 8.69914098441937 22.2380663112209 -0.595899838636227 0.0313171637822835 AT5G23060_at 11.4484372918453 11.5234413111699 11.5746407509656 11.6063225818842 11.8259558688669 11.663084283518 12.3608016914348 12.3551123435893 12.4191269940034 12.4460242549511 12.4546188272078 12.632649217956 12.3305397598400 12.4065627864682 12.3322488047310 12.8111007526959 12.3931034956358 12.5096913474691 12.4356959430019 0.0749929885454422 0.0715434549650606 0.0758440253782607 0.0730305894633366 0.0721543286166152 0.0804283919568411 0.0730869688028826 0.073798141906472 0.0808117289444238 0.0726404852492325 0.0734539909782408 0.0709945179540288 0.0728907025578502 0.0738616098603735 0.0750642119957005 0.0709945179540288 0.0754393987955523 0.0738445680208726 0.0736410220657952 5 0|5 /|- 7736771 7737322 7736953.571 7736593 7738538 - gene protein_coding_gene TRUE TRUE AT5G23060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G59780.1); similar to Rhodanese-like [Medicago truncatula] (GB:ABE85110.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) -0.594403960545596 -7.27770332390889 1.96496224788168e-05 0.0873229222958618 8.6799822980279 24.2534395677355 -0.594403960545596 0.0315267713683701 AT5G18780_at 7.32862963500957 7.39842602754619 9.00369921373342 8.90139849010055 8.33570374992597 7.8844980101253 4.13307062579385 3.87365271540189 4.40284244164853 3.93796989136776 4.37441053023521 4.18859010618753 4.17945882049619 4.66324761578354 4.11581216766816 5.10189768386998 5.90003607100157 5.86493209213681 4.26363416626513 0.225422209223335 0.224251517930544 0.220505101227805 0.224806638304982 0.230064826471306 0.22254566235049 0.224299095891424 0.223611151773672 0.242304766018438 0.220963098154187 0.231504676552532 0.224442058576201 0.228969952080074 0.227766175006072 0.227038931560534 0.220688077116125 0.246342013171455 0.220798246115647 0.226866487537541 5 5|0 +|/ 6265448 6266054 6265737.8 6264612 6266099 + gene protein_coding_gene TRUE TRUE AT5G18780.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G18770.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.709711388087645 7.26793041641915 1.98874731779573e-05 0.0883600433296644 8.67106079574266 11.6073999596293 0.709711388087645 0.0925836380429296 AT5G17190_at 10.0127744573003 10.2485096118019 10.6604612537955 10.8809130554830 10.6776391473539 10.1760116965119 9.013132893225 9.30577753785244 8.47103543295083 7.78071074809046 10.1466238360009 10.2468881390608 9.9863786285563 10.0699965380159 10.0696220939000 9.91992698291553 9.5052077236811 9.7212472950564 7.57792364594165 0.141719033947691 0.142180597256713 0.142739491844946 0.143820721266082 0.140653539125334 0.153993308799282 0.141799630417868 0.137466783379127 0.150367717036346 0.152058806581874 0.141900003524611 0.138449339562448 0.138152218191845 0.139535849473668 0.137928430718678 0.141964348735556 0.153182127078768 0.150269051740813 0.145224129496500 5 5 + 5652312 5652619 5652478.455 5652220 5652985 + gene protein_coding_gene TRUE TRUE AT5G17190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03160.1); similar to Erwinia induced protein 2 [Solanum tuberosum] (GB:AAO32066.1) 0.772076586102947 7.26540171022416 1.99495202816362e-05 0.0886157690910279 8.66875007022192 19.0726322968202 0.772076586102947 0.114979301184422 AT5G44530_at 8.04510198651788 7.78986715866141 7.31788460720525 6.93806752898045 8.76037296342557 7.83083549460182 9.70271843859922 9.27113336553296 9.52191794715956 9.85567403325562 10.5620003631691 10.7237636642938 10.0795037174689 10.3446314092037 10.2443119366367 9.82116024269084 9.13526334926703 9.93621296006931 9.58781917002636 0.152947258150885 0.147093747199835 0.162121070671699 0.166223602248356 0.140222631216226 0.158231176179786 0.139585934074246 0.135547995373864 0.145969110279844 0.135547995373864 0.136351243132573 0.137244128059887 0.141045967250283 0.138045506086959 0.135547995373864 0.135839930135396 0.145340618764709 0.138951312803235 0.135547995373864 5 5 + 17957798 17958290 17957981.636 17954916 17958519 + gene protein_coding_gene TRUE TRUE AT5G44530.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G30600.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G20430.1); similar to SLP3 (Subtilisin-like serine protease 3), subtilase [Arabidopsis thaliana] (TAIR:AT2G19170.1); similar to Os06g0700000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058476.1); similar to Os01g0769200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044371.1); similar to meiotic serine proteinase [Lycopersicon esculentum] (GB:AAF13299.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -1.03852877543849 -7.24335731463303 2.04993473230445e-05 0.0910376014616407 8.6485655309144 18.0874941956891 -1.03852877543849 0.194231131324876 AT5G23070_at 5.03449246696197 5.30460422133967 5.303480629321 5.63675725542712 6.189144053201 6.45370723588478 6.2157653137391 6.33752878419021 5.26552060918581 5.05909185468672 5.362479987931 5.94549910896319 5.45478283615318 5.38545156039879 6.0180183494395 5.74926338166442 5.23787553664137 5.66430859568863 5.21957439760081 0.188909236756847 0.197559205350516 0.203771304397004 0.185091996071368 0.193163697787396 0.195732054668073 0.190450458550907 0.192979650572913 0.192514737087719 0.196936785074407 0.187760837680213 0.191186698041081 0.195296463425843 0.190278338841660 0.191361320488688 0.189325648634037 0.199880721081034 0.187240559527889 0.185091996071368 5 5 + 7742265 7742733 7742518.455 7741906 7742981 + gene protein_coding_gene TRUE TRUE AT5G23070.1 thymidine kinase, putative similar to thymidine kinase, putative [Arabidopsis thaliana] (TAIR:AT3G07800.1); similar to TK1-like deoxyribonucleoside kinase [Lycopersicon esculentum] (GB:AAQ08180.1); contains InterPro domain Thymidine kinase; (InterPro:IPR001267) -0.69656227807109 -7.20797825978733 2.14161926672428e-05 0.095087895442558 8.61601930702336 11.2012377650587 -0.69656227807109 0.0897307522288343 AT5G13460_at 4.30442903910613 4.58323331967724 2.65085745639024 2.54186745356452 3.9747059658866 3.71924348384007 4.8535636109575 4.50606077631579 4.57118771451744 5.51110374061628 7.9575540535241 8.27943023055534 6.7388438269917 7.4619012397389 8.12824120442724 6.89214688194752 5.62109723963392 7.13451989529265 6.25211165530075 0.266294067470642 0.264303055223547 0.273343870759432 0.278923318595381 0.263231095878788 0.262403571275545 0.263630431534174 0.272459391496412 0.290413944133083 0.261634342568994 0.264331463274648 0.261634342568994 0.261727677880412 0.264559835833926 0.267967340644862 0.261634342568994 0.277154570756028 0.269457147793084 0.264490120991039 5 5 + 4317738 4318209 4317986.364 4315762 4318363 + gene protein_coding_gene TRUE TRUE AT5G13460.1 IQD11 (IQ-domain 11); calmodulin binding similar to IQD12 (IQ-domain 12), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G03960.1); similar to Os03g0355700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050136.1); similar to IQ calmodulin-binding re (GB:ABE78306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.697719870634674 -7.19048277910294 2.18858303466733e-05 0.0971512009088828 8.59985521596707 10.2525040673800 -0.697719870634674 0.0908545138973114 AT5G48850_at 3.56285699630756 4.07590802238360 4.30105981614174 4.67287172325973 4.57645131561588 3.85403337498146 5.51811387343262 5.38989455637361 2.90433520508192 3.14370203532519 1.76004710160242 1.81310331892420 2.19082332367558 1.97437607575427 2.26639085650286 2.71089287841379 3.07734302734796 2.24802134669067 1.93780923532174 0.298793810121289 0.308489847212647 0.308502278508460 0.303560853580513 0.301854676859507 0.315400794667045 0.315620443934948 0.339623594805955 0.306911482342806 0.312650817575779 0.300976811323440 0.306156609921878 0.307019693138351 0.298793810121289 0.306139890413835 0.298793810121289 0.298793810121289 0.312942082255232 0.303692405370585 5 5|0 -|/ 19822832 19823578 19823064.4 19822663 19824985 - gene protein_coding_gene TRUE TRUE AT5G48850.1 male sterility MS5 family protein similar to male sterility MS5 family protein [Arabidopsis thaliana] (TAIR:AT1G04770.1); similar to Os05g0506000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055980.1); similar to unknown [Oryza sativa] (GB:AAC72543.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.934412546492675 -7.18037543096258 2.21621931252966e-05 0.0983558130900661 8.59049600651827 6.95243549299048 -0.934412546492675 0.167764275537280 AT5G57300_at 5.72845241604163 5.62076925526437 6.06433827184505 5.73607860172727 5.8190084008129 5.94280909253148 5.56084480890484 5.67718776564043 5.32561737460752 5.49655088232705 6.09252422195727 6.20353823670119 6.11741628088673 6.22372981445972 6.01887318515084 6.07501514132884 5.62133586149822 5.77682922992665 5.74079694524687 0.195334514661951 0.191672809527706 0.191672809527706 0.196662025127662 0.191672809527706 0.201321316679631 0.191672809527706 0.198192949258831 0.209887347947974 0.197103090315193 0.196409033139200 0.199779384053280 0.192014607835564 0.191672809527706 0.192893033140445 0.191880649388375 0.199159881667496 0.202313275290266 0.209846051232489 5 5|0 -|/ 23225933 23227131 23226547.5 23225789 23228316 - gene protein_coding_gene TRUE TRUE AT5G57300.1|AT5G57300.2 UbiE/COQ5 methyltransferase family protein|methyltransferase similar to UbiE/COQ5 methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G23360.1); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE77912.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain UbiE/COQ5 methyltransferase; (InterPro:IPR004033) -0.640022789692473 -7.16778069203463 2.25118409513333e-05 0.0998850383010657 8.57881193584307 11.5372591502039 -0.640022789692473 0.0666232067343317 AT5G38140_at 6.72557926990866 6.07589366822711 6.1397969320862 5.98899223253005 7.30136131931862 6.22898620711605 7.78064378097302 6.85732633425208 7.98663492794463 8.1553948758835 8.15466704142048 8.00813295677145 7.72201507869927 8.1793950949931 7.78966649267569 8.60560129135386 7.74037865777541 7.9746051059662 8.5291620618077 0.205018049127812 0.194933672032797 0.225198439575108 0.211857383596334 0.193138757927373 0.210132764644547 0.198052427919112 0.198574230829466 0.197719173118218 0.190129065961951 0.190610690292379 0.191096493194027 0.190731266107025 0.202291760375487 0.188132789488223 0.190452815895677 0.193117520662169 0.198336741677891 0.191162889074378 5 5|0 -|/ 15238070 15239191 15238506.375 15237438 15239502 - gene protein_coding_gene TRUE TRUE AT5G38140.1 histone-like transcription factor (CBF/NF-Y) family protein Identical to Nuclear transcription factor Y subunit C-10 (AtNF-YC-10) (NFYC10) [Arabidopsis Thaliana] (GB:Q58CM8;GB:Q9FF42); similar to HAP5B (Heme activator protein (yeast) homolog 5B) [Arabidopsis thaliana] (TAIR:AT1G56170.2); similar to similar to Plasmodium falciparum. Hypothetical protein [Dictyostelium discoideum] (GB:AAL96724.2); similar to putative histone-like transcription factor [Dictyostelium discoideum AX4] (GB:XP_644597.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -1.32064040128249 -7.16190016303396 2.26771238309232e-05 0.100595721313975 8.57334838802363 14.7600916364692 -1.32064040128249 0.270726139020568 AT5G59170_at 6.07241569940362 6.13760448346439 5.95571786366858 6.12741232063251 5.07111155470193 6.0085191312197 5.89562092458984 6.75666596490899 5.9546816430994 6.23895339825349 6.57386511314332 6.21547216731438 6.16466773448388 6.34252466432566 6.34205016471622 6.57129913447922 6.21656956659369 6.33871253280116 6.1249436564937 0.206910157953983 0.212811154376766 0.220024756654189 0.220424917201831 0.214809816310549 0.220645973992588 0.215501341430563 0.223306105889647 0.210080758732514 0.210865178128879 0.204002298593592 0.210036404020078 0.21332161353638 0.215132207520489 0.211538937394918 0.204294242462673 0.217841404448310 0.216798208979097 0.206424446955704 5 5 + 23899550 23900110 23899894.909 23899214 23900348 + gene protein_coding_gene TRUE TRUE AT5G59170.1 proline-rich family protein similar to ATEXT3 (EXTENSIN 3), structural constituent of cell wall [Arabidopsis thaliana] (TAIR:AT1G21310.1); similar to cell wall protein (GB:AAA32741.1); contains InterPro domain Glutelin; (InterPro:IPR000480) -1.12975799275034 -7.14246690858637 2.32326949626552e-05 0.103037002159376 8.55525586640816 12.2290525098309 -1.12975799275034 0.222552609861935 AT5G55180_at 4.14335813193314 3.91489934975846 3.19928924207215 3.41290854977292 3.40419445383044 3.96737894755574 6.3960839469424 6.82332207352913 3.84642822017082 4.835220413639 5.71095020141517 6.50464725168272 5.60097775531413 6.16807245514502 6.07811450687379 7.98729184219885 5.9386893062642 5.46403116034941 3.89551871905682 0.252261848157815 0.251032229957177 0.253584094820695 0.255621805535972 0.252990757846133 0.256125776450506 0.257635120824244 0.252311088078401 0.267125955160303 0.251266758281731 0.255976888881225 0.260046038878552 0.256115531053008 0.264615234648224 0.253924164042334 0.263085032564056 0.263148456016096 0.250237605546097 0.253494849663723 5 5|0 +|/ 22406932 22407454 22407240.6 22406008 22407938 + gene protein_coding_gene TRUE TRUE AT5G55180.1 glycosyl hydrolase family 17 protein similar to hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT4G26830.1); similar to elicitor inducible beta-1,3-glucanase NtEIG-E76 [Nicotiana tabacum] (GB:BAB17320.1); similar to beta-1,3-glucanase 2 [Ziziphus jujuba] (GB:AAZ40342.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.81497527139095 -7.1313595572586 2.35568105021874e-05 0.104450897766699 8.54488909427439 9.5946723006881 -0.81497527139095 0.133772017924936 AT5G55030_at 6.24348760106823 6.25765773912826 7.56859543053829 7.80381585415643 8.1444861678674 7.74272643354483 5.82834886485281 5.45163639848981 5.59025756036377 5.89690188241901 7.94734903715872 7.4297944691146 7.41245078526132 7.27774089355333 7.66952323592168 7.72222222135084 7.43126336865565 7.03514070939948 5.99215469460985 0.211119317886376 0.214810533338565 0.218663492652136 0.219579831048849 0.215789976122877 0.228166670187389 0.21368703133096 0.231753850211154 0.227104841171516 0.216089968051943 0.211119317886376 0.215293235532090 0.211119317886376 0.227133336740847 0.212942920839140 0.211119317886376 0.224349172424398 0.235759006388322 0.211119317886376 5 5 - 22344957 22345526 22345197.455 22344421 22347072 - gene protein_coding_gene TRUE TRUE AT5G55030.1|AT5G55030.2 similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT1G20670.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM22713.1); similar to Os03g0130800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048857.1); similar to Os09g0550000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063862.1) 0.724986395240656 7.12355489496747 2.37874646721082e-05 0.105449830891456 8.53759358697066 13.5386561291305 0.724986395240656 0.103667198130049 AT5G18540_at 4.36924339463051 4.21887149705215 4.82794693448711 4.94353090039284 5.92175564849162 5.2790422121907 2.24567348314464 2.71932671198625 2.80347139993032 2.90359847433601 4.49346533400282 4.2886488402288 4.24409166704811 4.58760724047137 3.95504137549669 4.05015083030433 4.56373677846335 3.95951357171766 3.21908223652272 0.259739193114011 0.260386116195259 0.268033484217388 0.263660443648535 0.289068702366307 0.277965374337705 0.259088506217636 0.272192080234917 0.269942967255919 0.262158526350013 0.260010853255488 0.26122649491315 0.259088506217636 0.264818385286730 0.26033323318791 0.259088506217636 0.259088506217636 0.262521372351583 0.266647795421317 5 5|0 +|/ 6153933 6154260 6154141.286 6153871 6156168 + gene protein_coding_gene TRUE TRUE AT5G18540.1|AT5G18540.2 similar to Os07g0669600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060588.1) 0.838884763664506 7.11048944995246 2.41790553787338e-05 0.107161573438548 8.5253597398171 7.93725684362014 0.838884763664506 0.1420102327796 AT5G27320_at 6.28247797371809 6.92669416333822 7.4242608242428 8.06019359670365 8.86678271047496 7.96550648986689 5.4714876065599 5.46998787299138 4.26111619158433 5.1593451148304 6.90692128087511 6.7474935376209 7.6243051100731 7.28446915017108 6.07934323312267 7.61138305135791 7.47843834291233 7.28108808584998 5.09921183908946 0.261940113726374 0.261613685593216 0.265876480538608 0.268756230986507 0.277902840843935 0.275026218537688 0.270205760422246 0.262365235133047 0.277829694451160 0.269036376794126 0.283773795518103 0.261613685593216 0.264380987061176 0.273328210555978 0.279433764821081 0.261613685593216 0.276055872851458 0.263373238444491 0.266063452706511 5 5 + 9630215 9630679 9630435.545 9629095 9631213 + gene protein_coding_gene TRUE TRUE AT5G27320.1 ATGID1C/GID1C (GA INSENSITIVE DWARF1C) Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. Identical to Probable gibberellin receptor GID1L3 (EC 3.-.-.-) (GID1-like protein 3) (GID1L3) [Arabidopsis Thaliana] (GB:Q940G6); similar to ATGID1A/GID1A (GA INSENSITIVE DWARF1A) [Arabidopsis thaliana] (TAIR:AT3G05120.1); similar to (GB:ABG89394.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 1.11789954447073 7.10315829202415 2.44018173745751e-05 0.108124452786742 8.5184838025595 13.0417095409866 1.11789954447073 0.221058354784944 AT5G24020_at 5.516173971415 5.54729903627071 5.76651530986192 5.86210487707738 5.93435360012618 5.59141730316708 5.79487159090178 5.70892681276491 5.53383152306886 5.81230503165962 6.2204000905892 6.57147625424641 6.20115475201386 5.99983183612192 6.9235650605645 6.40309402610043 5.83045177032526 5.86076089356458 5.52754209332736 0.276745721759775 0.276060175534452 0.276060175534452 0.27959889677827 0.284442725412393 0.287524477082988 0.281822523299734 0.282357081646441 0.285112244011589 0.276060175534452 0.276060175534452 0.276060175534452 0.289608265435047 0.276060175534452 0.288345377429567 0.281995484288847 0.282159782123716 0.284244179943066 0.282332431189868 5 5 + 8117247 8117679 8117451.091 8116683 8118033 + gene protein_coding_gene TRUE TRUE AT5G24020.1 MIND (ACCUMULATION AND REPLICATION OF CHLOROPLAST 11) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to plastid division regulator MinD [Solanum tuberosum] (GB:AAZ23778.1); contains InterPro domain Cobyrinic acid a,c-diamide synthase; (InterPro:IPR002586); contains InterPro domain Septum site-determining protein MinD; (InterPro:IPR010223) -0.628085558276199 -7.10051726706634 2.44826073596525e-05 0.108457950603261 8.51600475966998 11.6531585050945 -0.628085558276199 0.0636074049091629 AT5G49330_at 3.43425187071809 3.03136169082379 3.43540598292309 3.07675102451421 2.75990708039803 2.99483598079641 2.99313587863244 2.99890369099174 3.75980018308463 3.83798634237926 3.39406203072551 3.32741734470283 3.16595796691876 3.06553374767938 3.29093728282131 3.30148390114680 3.74772971921215 3.31987067779852 3.37877994635735 0.198422370926332 0.197404694318691 0.195544010359120 0.201570400907443 0.208121355147291 0.198291608204455 0.206264390646784 0.20192734294991 0.198797032396245 0.203808039482246 0.194974356568392 0.197578743800447 0.206252917505219 0.207292804764194 0.201227608913983 0.202963612829515 0.206304570631095 0.206475324393117 0.20224293350805 5 5 - 20016396 20016907 20016665 20016178 20018604 - gene protein_coding_gene TRUE TRUE AT5G49330.1 AtMYB111 (myb domain protein 111); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB12 (myb domain protein 12), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT2G47460.1); similar to Myb-like DNA-binding domain, putative [Medicago truncatula] (GB:ABE90996.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.71563946202315 -7.08093171678359 2.509080255793e-05 0.111127164529072 8.49758718676613 6.5833089372161 -0.71563946202315 0.101820095374885 AT5G53570_at 7.81607783376947 7.88434007181938 8.48113336127487 8.67118568233065 8.56935015043709 8.642938781312 5.7283513979092 6.69087119982211 5.50647598450095 5.12410616441555 7.40866633191803 7.71981851141389 7.28780468855625 7.63720088926679 7.46814020256594 7.74633521725748 7.70066378171296 7.46001176312822 4.97012764569479 0.204138491339232 0.201613566199423 0.208377248595152 0.212799164527651 0.198529071278762 0.204172764104285 0.222828424780640 0.208430189711269 0.241148077769152 0.205683940723046 0.209669251780204 0.201147851227934 0.20314540871306 0.209621993690171 0.203851303168327 0.202131895568818 0.208367612900642 0.22046065608414 0.217175732790173 5 5 - 21778188 21778699 21778459.364 21777816 21780688 - gene protein_coding_gene TRUE TRUE AT5G53570.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to RabGAP/TBC [Medicago truncatula] (GB:ABE88406.1); similar to Os09g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063739.1); similar to Os08g0547200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062427.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.930651804535838 7.07422818973766 2.53026903180762e-05 0.112040312728441 8.49126993768576 14.1874394455499 0.930651804535838 0.170670793960262 AT5G10860_at 11.8759885035349 11.8603982511971 12.3754079668408 12.2610408513258 12.6958156299974 12.7587920586360 10.6092907866768 10.6167962774894 10.2474016160108 10.1610015701367 11.1298739741044 10.8971938725284 11.3424403160480 11.3085881758657 10.8982534582361 11.1221128727589 11.4976178684579 11.3851282364580 10.2866864563848 0.088160294595504 0.0853625148907652 0.0872738792855439 0.0893780219036525 0.0873723645993023 0.0859135281247848 0.0890998149171268 0.0892437697618862 0.0912210514693468 0.0927760062592042 0.087303104789979 0.0853625148907652 0.086040830041782 0.0853625148907652 0.0884646185091352 0.0853625148907652 0.094639540113557 0.0859228988489018 0.0883725824458477 5 5 - 3429196 3430082 3429793.364 3428892 3430471 - gene protein_coding_gene TRUE TRUE AT5G10860.1 CBS domain-containing protein Identical to Protein At5g10860, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9LEV3); similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63490.1); similar to CBS1 [Hyacinthus orientalis] (GB:AAT08729.1); contains InterPro domain CBS; (InterPro:IPR000644) 0.568358871597732 7.05430528119057 2.59438752607729e-05 0.114853535779442 8.47245437015538 22.5963651128712 0.568358871597732 0.0227915397092009 AT5G25080_at 4.25049714069348 4.46763570297016 5.8215609269233 5.84144660025096 5.58626189356131 5.69416428497482 4.38215724950488 4.77288158847139 2.88532193465614 3.23727804576169 4.7569442035517 4.94683601500503 4.53943083677762 4.7090997779528 5.59875003324421 4.83617247728711 4.5540466377739 4.80049478523627 3.14537101984679 0.227118451873203 0.224747523593781 0.225325778868664 0.229468959851004 0.223446159386203 0.227212101070609 0.223522488536268 0.227438984031222 0.243101794436610 0.235251770598241 0.223446159386203 0.225718209416883 0.22892934582642 0.227478034080606 0.224592347898464 0.223446159386203 0.237067013747097 0.237348172845809 0.230957640571094 5 5|0 +|/ 8643854 8646249 8645206 8643675 8647061 + gene protein_coding_gene TRUE TRUE AT5G25080.1 similar to Os08g0270200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061417.1); similar to Putative protein [Hordeum vulgare subsp. vulgare] (GB:ABL11227.1); contains InterPro domain Exosome-associated; (InterPro:IPR011082) 0.657707265808535 7.05399557906262 2.59539795550933e-05 0.114872313510843 8.47216140056136 9.06809842972301 0.657707265808535 0.0796527268770325 AT5G46330_at 6.784887298937 7.17381050882218 7.0210870231017 7.21665240025086 8.48245203429528 7.82571940729064 4.79217607174841 4.82905986233351 7.11014640121796 6.16138347930889 8.97879257392808 9.03288100273345 8.54293277031629 8.53405281258127 8.45783223112755 9.46129262950578 7.88135699325604 8.63406740617022 7.07114143886284 0.256019838792451 0.259194403915911 0.269544291478401 0.260413713965238 0.261273218364614 0.268010505396831 0.257851108933559 0.257966646840522 0.267305781596632 0.263662837198933 0.255348077577295 0.255348077577295 0.260104141928827 0.260057745026296 0.264043808804838 0.255442143090103 0.266912047779518 0.263229376607321 0.264608786382855 5 5 + 18811967 18812522 18812216.182 18808963 18812773 + gene protein_coding_gene TRUE TRUE AT5G46330.1 FLS2 (FLAGELLIN-SENSITIVE 2); ATP binding / kinase/ protein binding / protein serine/threonine kinase/ transmembrane receptor protein serine/threonine kinase Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. similar to EDA23 (embryo sac development arrest 23), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G44700.1); similar to Os04g0618700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053894.1); similar to H0313F03.16 [Oryza sativa (indica cultivar-group)] (GB:CAH68341.1); similar to OSJNBa0058K23.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE02151.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.813386239179973 7.04266838590221 2.6326466113804e-05 0.116494612553583 8.46143605545929 14.5013763219719 0.813386239179973 0.136501108712616 AT5G39210_at 8.90736236351795 9.12682206693456 8.60150110976923 8.63599036888315 9.5926771210794 8.89466377780454 9.07181142985004 9.04533094425573 7.99841453348525 8.98293888862942 8.43753864199774 8.9285061194562 8.79594550231657 8.8912150691866 8.88744241920918 9.01025062452172 8.56900189017021 7.83231498559189 8.58315288019213 0.170194255617301 0.170736145307695 0.172301185007587 0.171264578658841 0.170656640937935 0.192029635763912 0.174281143086412 0.177555749985693 0.207990293208588 0.168617602832633 0.175084249060315 0.171865626202565 0.166954623843383 0.168672998808190 0.171723846037687 0.173372373944646 0.196139769336035 0.196683759732430 0.176460874896034 5 0|5 /|+ 15720646 15721189 15720949.111 15720349 15721332 + gene protein_coding_gene TRUE TRUE AT5G39210.1 CRR7 (CHLORORESPIRATORY REDUCTION 7) Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex. similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87136.1) -0.782267253528192 -7.03126557133051 2.67072597870861e-05 0.118152917298069 8.45061915573304 17.5797844014244 -0.782267253528192 0.126847523811986 AT5G62040_at 0.717725354430726 0.710352498813835 1.76671442752208 1.68217655281731 2.40928008602147 2.22223126689129 1.33968944643046 0.954644375974696 0.0607514523102578 0.831737575036332 0.500733446489788 0.600395811289326 0.727241804244162 0.488625203419128 0.139127081985806 1.53232348859549 1.90462755518850 0.923630017073182 0.63390588115307 0.221796321027685 0.222871726770465 0.221572158832079 0.219770677510243 0.236463727461896 0.228692968048255 0.214667450692091 0.218716970654641 0.218827121212106 0.229333636005541 0.221627507565803 0.224190192683628 0.217089245457248 0.214667450692091 0.216893896878337 0.215738460503480 0.243070475800390 0.217931451881217 0.218506175414035 5 5|0 +|/ 24940116 24940911 24940593.556 24940036 24940935 + gene protein_coding_gene TRUE TRUE AT5G62040.1 brother of FT and TFL1 protein (BFT) Identical to Protein BROTHER of FT and TFL1 (BFT) [Arabidopsis Thaliana] (GB:Q9FIT4); similar to TFL1 (TERMINAL FLOWER 1), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT5G03840.1); similar to flowering locus T like protein [Populus nigra] (GB:BAD08339.1); contains InterPro domain Phosphatidylethanolamine-binding protein; (InterPro:IPR001858); contains InterPro domain PEBP; (InterPro:IPR008914) 0.645873138641581 7.02568843010297 2.68956626293883e-05 0.118959515809785 8.44532128746573 2.15579492804718 0.645873138641581 0.0755216537349349 AT5G67310_at 1.37417891281956 1.46503017738725 3.08754276480572 3.49100941576196 1.43034597789027 1.59442142044116 0.824749319675802 0.867142729860922 0.756631087714953 1.00980489187955 1.53415781107649 1.1475718605753 0.770785073784161 1.11474989799940 1.2480174761577 1.34879379855171 0.68542184237502 0.80399476127252 0.8332718292681 0.207926580751305 0.208871966331003 0.209158787860162 0.230075559596427 0.203226034197141 0.203079601640891 0.203079601640891 0.203079601640891 0.206538815444046 0.205786967136105 0.203079601640891 0.218125274947601 0.205979868973836 0.204280311108709 0.210678150894583 0.203079601640891 0.208810342976363 0.209919267380298 0.211978277025246 5 5 - 26872581 26873093 26872806.909 26872442 26874167 - gene protein_coding_gene TRUE TRUE AT5G67310.1 CYP81G1 (cytochrome P450, family 81, subfamily G, polypeptide 1); oxygen binding member of CYP81G similar to CYP81D1 (CYTOCHROME P450 91A1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G36220.1); similar to cytochrome P450 [Cicer arietinum] (GB:CAB43505.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.649344611212737 7.01981372633116 2.7095666037668e-05 0.119817035218568 8.43973556594334 2.74093050725278 0.649344611212737 0.0773454152514681 AT5G08620_at 5.91097068279943 5.66026942728308 5.41920143068095 5.67161199390626 6.10478956026745 5.16116220063655 5.19468754289655 5.53831824717539 4.51779830624981 5.09033425383554 4.79000291557685 5.3860095677078 5.00872826314304 4.37076829462571 5.51389149180519 5.33477332626449 5.26185173415845 4.83355305287109 5.62639975705624 0.235171171894050 0.230197142921309 0.236061210261940 0.239525001210095 0.235281636657345 0.233844129271944 0.235985209608713 0.228799104335213 0.243534546214157 0.228534467251005 0.232181747071793 0.227819913369841 0.230795568163262 0.227048966330298 0.228443118634696 0.229476659149955 0.236560856764640 0.233772074438682 0.237048235806868 5 5 + 2796697 2797525 2797191.091 2794458 2797661 + gene protein_coding_gene TRUE TRUE AT5G08620.1 DEAD box RNA helicase (RH25) Identical to DEAD-box ATP-dependent RNA helicase 25 (EC 3.6.1.-) (RH25) [Arabidopsis Thaliana] (GB:Q94C75;GB:Q9ZS00); similar to DEAD box RNA helicase (RH26) [Arabidopsis thaliana] (TAIR:AT5G08610.1); similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G63630.1); similar to myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61516.1); similar to DEAD-box ATP-dependent RNA helicase 31 (GB:Q9FFQ1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD46119.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -0.967487552426235 -6.99211119203973 2.80606152470133e-05 0.124055980007046 8.41332384293389 10.6529387706138 -0.967487552426235 0.184372415004422 AT5G06930_at 1.43557922836741 1.39970902111999 2.28778332755776 2.49026059989425 2.12505523382075 2.44826969926219 1.62930982930001 1.46865409618987 2.20531386859200 1.15836741177710 2.58856866963416 2.63911811951804 2.03957545511079 2.19865298439846 2.80450869398097 2.30719341898785 3.53459617373191 2.15704070734247 1.96153031241821 0.227077051848865 0.217903496557165 0.2232777666617 0.215489301223428 0.215695506010649 0.217962917286832 0.219186890369853 0.215120406129540 0.224279920682965 0.218746377790123 0.216974172861390 0.213573292760382 0.224043284941833 0.218131307101461 0.213573292760382 0.215703083817785 0.219092098501286 0.224739177112977 0.225653205712788 5 5|0 +|/ 2147158 2147779 2147502.889 2145000 2148040 + gene protein_coding_gene TRUE TRUE AT5G06930.1 similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.2); similar to hypothetical protein [Nicotiana tabacum] (GB:BAC53933.1) 0.632431991748226 6.96341047894861 2.90994745514443e-05 0.128619677517384 8.38583495679308 4.06494128382262 0.632431991748226 0.0718878265289623 AT5G04650_at 4.07510543681736 4.14115304911709 4.3865495644086 4.44107113326392 4.35621531441459 4.21918838507581 3.9424686550992 3.9490524369221 4.49046906888501 4.24417609180792 4.28576581630441 4.37444185167501 4.60121085057713 4.47453069961493 4.56567749101253 4.76113202623159 4.45131170730483 4.74287987353479 4.35351016322408 0.183822285010115 0.189500880991185 0.187296817445019 0.188352471214201 0.182828230902922 0.187925828915062 0.187002275241236 0.187722555611828 0.187913311827555 0.187011697845570 0.184345349076535 0.184531883514965 0.185943567319915 0.185252158555357 0.193279514365958 0.183065959107095 0.193898973215718 0.185120995787712 0.186331048754993 5 5|0 +|/ 1334427 1334811 1334695.125 1334404 1334957 + gene protein_coding_gene TRUE TRUE AT5G04650.1 unknown protein -0.564887540991061 -6.95797164870113 2.93009658331412e-05 0.129480968016651 8.38061133433203 8.63626911230862 -0.564887540991061 0.0279870720825999 AT5G12930_at 1.73793535975125 2.19667107744144 4.1528199014645 4.28606511732235 2.31680080076781 3.02379028286352 1.14181119641820 0.987551437146688 1.49441052319742 2.04931333389519 1.1836056700478 2.49516467493874 1.75222031535309 2.16479223274534 1.98321143907989 1.7941824077482 1.74620150975314 2.05483002050701 1.68267077496008 0.212660110259916 0.213589457517799 0.233056457703138 0.226770685875965 0.217640667179528 0.225284659711579 0.231024450707602 0.21261349165459 0.224973820008924 0.230493789255723 0.223849346995281 0.216242606550896 0.219454341328182 0.223196496208944 0.231334668839402 0.215497046179924 0.221247828592699 0.229853771519936 0.22671799066442 5 5 - 4083194 4083906 4083398.273 4082893 4085300 - gene protein_coding_gene TRUE TRUE AT5G12930.1 unknown protein 0.845225370529938 6.9461143104064 2.97454668306443e-05 0.131415472457787 8.36920719855575 4.29988443554157 0.845225370529938 0.150051760987903 AT5G35790_at 9.98484764579955 9.95421929774493 10.0222003366946 9.9699609744954 10.5684809340488 10.2349796573748 10.7315189723285 10.4830501057418 10.8889831333371 11.0497036171315 11.2913081098024 11.1756630750285 10.7135291016868 11.0398808899451 11.2969950409476 10.9776693274855 10.8338437444639 11.0538863274219 11.0693430432303 0.0719840073680545 0.0697501931930242 0.0703599892091558 0.0703073515804694 0.0688583507325178 0.072793067523779 0.069878041380033 0.0697193719724061 0.0754831153751865 0.0718858312201664 0.0692262639907137 0.0684698841820229 0.0727442110549247 0.0728995866665369 0.0739902392466735 0.0682605813497679 0.0722291661000387 0.0681996313401465 0.068920523385397 5 5 - 13974147 13974736 13974419.182 13973920 13976975 - gene protein_coding_gene TRUE TRUE AT5G35790.1 G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1); glucose-6-phosphate 1-dehydrogenase Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. Identical to Glucose-6-phosphate 1-dehydrogenase 1, chloroplast precursor (EC 1.1.1.49) (G6PD1) (G6PDH1) (APG1) [Arabidopsis Thaliana] (GB:Q43727;GB:O65577;GB:Q9FFM5); similar to G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2), glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana] (TAIR:AT5G13110.1); similar to G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3), glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G24280.1); similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD) (GB:Q43839); similar to glucose-6-phosphate dehydrogenase [Nicotiana tabacum] (GB:CAA04994.1); similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD) (GB:O24357); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) -0.632498408393781 -6.94479335844087 2.97954333990319e-05 0.131606429323524 8.3679353777012 21.2689190155272 -0.632498408393781 0.0727296944662276 AT5G15450_at 10.5388510173761 10.5935389064961 11.1317758435844 11.0478268484226 10.9533995088678 10.8175551375678 11.6853650063692 11.7033264354764 11.0926292457112 11.3328505847813 11.3246210935607 11.2604885653718 11.2787746735793 11.4284481684267 11.2296067208904 11.4276684388322 11.1006352305014 11.4199116118532 11.0486369092442 0.0714420342187113 0.0669533477670018 0.0681841980609561 0.069124408930314 0.0670738527164741 0.0696328229605133 0.0682111561466823 0.0662641833821915 0.0726603659827768 0.0700900219139988 0.0662641833821915 0.0679724954063772 0.066542069283242 0.0715031953485767 0.0689480048589609 0.0662641833821915 0.0690036987242883 0.0666725569234373 0.0684084780583896 5 5|0 -|/ 5014462 5015311 5014935.4 5014215 5018350 - gene protein_coding_gene TRUE TRUE AT5G15450.1 APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6); ATP binding / ATPase Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to ATHSP101 (HEAT SHOCK PROTEIN 101), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT1G74310.1); similar to CLPB-M/CLPB4/HSP98.7 (HEAT SHOCK PROTEIN 98.7), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT2G25140.1); similar to ClpB [Phaseolus lunatus] (GB:AAF91178.1); similar to Chaperone clpB 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96724.1); similar to heat shock protein [Solanum lycopersicum] (GB:BAE06227.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Clp, N terminal; (InterPro:IPR004176); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.563869145801589 -6.92961532896104 3.03760871524078e-05 0.134140800865033 8.35330232409624 22.2923589510813 -0.563869145801589 0.0293757450826183 AT5G59050_at 5.61175770253469 5.94183247296351 7.90831447843172 7.93084332633405 8.52958674720111 7.86619423140096 7.29685591851653 7.31766808892692 5.27441514657074 5.48248454245232 7.50040207455583 7.44273043001806 8.15547336234406 7.76727249734359 6.62805205566404 8.15334870109279 7.58516090451956 7.21208463397396 5.58546160066893 0.271798249798804 0.258030398292997 0.257370024379667 0.256996851685436 0.252712708739839 0.254667572173459 0.257370551957743 0.253439842988863 0.289521398403479 0.253679718891887 0.252712708739839 0.255391611139281 0.257103331771253 0.252712708739839 0.257323269986499 0.252712708739839 0.277541271667900 0.263228396210429 0.261344494288308 5 5|0 -|/ 23858844 23859568 23859189.333 23856383 23859903 - gene protein_coding_gene TRUE TRUE AT5G59050.1|AT5G59050.2 |unknown protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54000.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33149.1)| 0.775238246562294 6.92795251714354 3.04404363577721e-05 0.134394526519564 8.35169702837376 13.8018912936235 0.775238246562294 0.128338402711636 AT5G64150_at 3.89478652264537 3.74501278777063 3.85524717608554 3.89551543287406 3.7694411878329 3.54617210979808 3.46233096105563 3.66095973065052 3.4444179556553 4.02299988533428 3.60762225972424 4.21065498449360 3.56690160485184 3.9178491586402 4.12247398959157 4.09271853035381 3.85439234133827 3.60097862359362 3.87894395782162 0.189212313453742 0.188941502705218 0.189874513021135 0.185995673568084 0.187581248214161 0.194398162143840 0.193709676384824 0.191765068161750 0.185995673568084 0.186884561939166 0.189521537780002 0.190190607218991 0.194676771967886 0.192951889916428 0.187035772031095 0.187369992642156 0.192920605596785 0.188347703113703 0.189158441071006 5 5|0 -|/ 25686231 25687305 25686885 25686057 25688444 - gene protein_coding_gene TRUE TRUE AT5G64150.1 methylase family protein similar to Predicted methyltransferase (ISS) [Ostreococcus tauri] (GB:CAL52132.1); similar to Os12g0612500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067259.1); contains InterPro domain Methyltransferase small; (InterPro:IPR007848); contains InterPro domain Modification methylase HemK; (InterPro:IPR004556); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) -0.602630856607624 -6.9225086887674 3.06521356105881e-05 0.135298526585136 8.34643847415064 7.55559300667766 -0.602630856607624 0.058264751239867 AT5G58510_at 4.54352294755944 4.35291477416254 5.43454375026196 5.13411493390942 5.18374832218362 4.94116717845155 3.2318097465174 3.24131828109882 3.92893491838434 3.35731634237968 5.5688655216622 5.76665942617182 5.49122420253002 5.90229147912096 4.97014549344874 5.33928091307695 5.522486116617 4.65222839827602 3.98734718855713 0.245903439470972 0.232314500310276 0.234518396824084 0.233037286833154 0.237411663369427 0.231926644387910 0.241889015951026 0.229945320402930 0.228842445810867 0.236720534700302 0.239332765580685 0.237964841973103 0.228842445810867 0.239395925005817 0.232918685601277 0.23178459678334 0.228842445810867 0.238067901459650 0.235278558579645 5 5 - 23665537 23666250 23665864.182 23665379 23671778 - gene protein_coding_gene TRUE TRUE AT5G58510.1 similar to catalytic [Arabidopsis thaliana] (TAIR:AT5G55060.1); similar to PREDICTED: similar to KIAA0066 [Gallus gallus] (GB:XP_422135.2); similar to Os03g0295700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049826.1); contains domain FAMILY NOT NAMED (PTHR21422); contains domain SUBFAMILY NOT NAMED (PTHR21422:SF3) 0.632845955803925 6.90679421664375 3.12721762287474e-05 0.138004113697462 8.3312327917482 9.08764941358643 0.632845955803925 0.0745391603825706 AT5G45310_at 4.84788669109703 5.28028679553103 7.25427149557705 7.3383687482818 8.42422908929756 8.2903878173641 5.01612506814387 5.69419007924266 3.08209214509711 4.63473600692821 4.86194070889054 4.08581957742535 5.99952618126956 4.94866459555552 4.14219485716466 5.15545888920621 6.93168443947856 5.25268128499121 4.80935662462378 0.244275989840870 0.243711442732717 0.248381414126309 0.253146308031146 0.244727259541898 0.239033657946148 0.241528805926618 0.242994128103466 0.264649018673070 0.238901673846274 0.239660834397633 0.238901673846274 0.238901673846274 0.242151330069405 0.243156069577853 0.241710132749665 0.247645920928094 0.241767417313312 0.242100350668295 5 5 - 18376611 18377011 18376793.545 18376502 18378341 - gene protein_coding_gene TRUE TRUE AT5G45310.1 similar to Os01g0962100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045475.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84156.1); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) 0.814158212921942 6.90560005343078 3.13198426134326e-05 0.138183145610464 8.33007570956449 11.1920388442156 0.814158212921942 0.141833879881006 AT5G67210_at 1.50450295891901 1.27947430625573 2.74982334358274 2.10566732619859 1.66082377931645 1.86914804620944 1.69992907667162 1.62169113563940 1.42989265423021 1.43344730416922 2.51738822295447 2.50053369417429 2.36130904587881 2.80153025115519 3.16773145605455 2.78669631172987 3.29232140268662 2.74466796060851 1.61650089569859 0.215735380833338 0.218340369859766 0.215735380833338 0.217921528911751 0.220878815178620 0.215773782398537 0.219740198268206 0.217776917793077 0.242016866738258 0.219045820377925 0.216978542017293 0.220013798663290 0.220361338687882 0.216173203883041 0.221633741987992 0.216729096021774 0.231369072676152 0.22996517567852 0.223874119566947 5 5 + 26836599 26837138 26836857.818 26836175 26837383 + gene protein_coding_gene TRUE TRUE AT5G67210.1 nucleic acid binding / pancreatic ribonuclease similar to nucleic acid binding / pancreatic ribonuclease [Arabidopsis thaliana] (TAIR:AT3G50220.1); similar to Uncharacterized plant-specific domain 01627 [Medicago truncatula] (GB:ABE82263.1); contains InterPro domain Protein of unknown function DUF579, plant; (InterPro:IPR006514); contains InterPro domain Pancreatic ribonuclease; (InterPro:IPR001427) 0.759842164479071 6.90005487935445 3.15422112465617e-05 0.139132693808584 8.32469979166536 3.94378378552644 0.759842164479071 0.124201543784426 AT5G20790_at 3.1774033597235 3.15597214453332 3.01468693557846 2.68806315294130 1.95206031608432 2.04694605489455 2.71098070485657 2.81589304792972 2.80272204210351 3.09913772176089 2.88671742725695 2.42772536801207 2.93528898065138 2.88361155920036 2.37432226176927 3.53579418463844 2.83073672929255 2.7792333478384 2.48213464083325 0.186055451218225 0.184423655904423 0.177608123813823 0.182196855516725 0.182928338920738 0.182841463518936 0.180028526294595 0.182076169001700 0.185868388027926 0.177187072622376 0.178715160276935 0.176851746399752 0.178867433759984 0.179059785371457 0.184708570690143 0.176117861725875 0.180152878615135 0.184670427958237 0.180901306394946 5 5 - 7040049 7040593 7040359.182 7039913 7040656 - gene protein_coding_gene TRUE TRUE AT5G20790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G43110.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90972.1) -0.603144016913703 -6.85808979507604 3.32811668175124e-05 0.146769945665230 8.2838588474766 5.50842248151687 -0.603144016913703 0.0617085597824944 AT5G50840_at 7.18322511268916 7.0681001371407 8.62679287716647 8.42454742060933 8.58141383405738 7.8843653288351 6.14984384077862 6.31372115085926 5.21127698109458 4.79594162542967 7.15204379025843 7.21608435996033 7.06694341975846 7.25905547363193 6.968792937952 7.16338732754763 6.74173282618024 6.7225885655102 5.32064823725797 0.241689862285032 0.233244127032692 0.239478735432834 0.241988631185323 0.235506355497253 0.243212906860766 0.235696362099546 0.238280233930377 0.25832474887209 0.245102805107327 0.234517159933945 0.233244127032692 0.240823257564927 0.240492517052452 0.245716640135254 0.235025314049276 0.24296642663011 0.246706950489025 0.233244127032692 5 5|0 +|/ 20704678 20705940 20705346.7 20703046 20706144 + gene protein_coding_gene TRUE TRUE AT5G50840.1|AT5G50840.2 similar to nuclear matrix constituent protein-related [Arabidopsis thaliana] (TAIR:AT1G13220.2); similar to Alpha-taxilin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95380.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 0.7728450990314 6.85436637375975 3.34403668534992e-05 0.147438577457078 8.28022176067195 13.6018099805307 0.7728450990314 0.130296415124168 AT5G08340_at 4.2602317135773 4.66063626798091 4.70802814068194 4.60854107462882 5.08110796071841 4.86403345745827 4.74953226898549 4.86418911302116 4.71002027968987 4.39081156979549 4.65425866899218 4.7108580253002 4.95471441868816 4.6777868559186 4.56459635069011 5.27320868574331 4.38200626784723 5.0890209541479 4.41290985216966 0.189248338777693 0.190577239967108 0.190806234499363 0.200452906621076 0.190679719439359 0.198507519332759 0.192970971337397 0.194266460867178 0.190778974784557 0.190161625862103 0.190083962781567 0.18638601186239 0.189241555770725 0.184672809857769 0.192695316079287 0.190461271641908 0.192449881561626 0.196313369826292 0.194280196597580 5 5 + 2684931 2685875 2685318.455 2683833 2685998 + gene protein_coding_gene TRUE TRUE AT5G08340.1|AT5G08340.2 riboflavin biosynthesis protein-related similar to riboflavin biosynthesis protein-related [Arabidopsis thaliana] (TAIR:AT5G23330.1); similar to unknow protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72379.1); similar to Os03g0801700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051594.1); similar to riboflavin biosynthesis protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99395.1); contains InterPro domain Riboflavin kinase / FAD synthetase; (InterPro:IPR002606) -0.646596042509353 -6.85217486355216 3.35344507470518e-05 0.147819858893004 8.2780800410004 9.37098092244869 -0.646596042509353 0.0830822834559209 AT5G09510_at 8.31360493011181 8.7714474727574 8.7256474731889 8.879233421801 8.78214543437674 8.82909016415102 9.01255699676007 8.99436798318734 8.18178091883276 8.24076573164344 8.75515884483489 8.69265255294845 8.34794581276156 8.33567185475831 9.10901693857483 8.31605426608422 8.09865227338607 8.2463815726252 8.01662499447924 0.136707692132234 0.136707692132234 0.141164882111809 0.137168472310561 0.140544725715078 0.136707692132234 0.142207008698869 0.149011741771582 0.156868175161856 0.142902274798529 0.146732334251088 0.138125143765912 0.138766854960961 0.144032876972272 0.14332521111599 0.145293044569298 0.145683851568746 0.149628236803308 0.138853391841959 5 5|0 -|/ 2955744 2956413 2956096.111 2955114 2956674 - gene protein_coding_gene TRUE TRUE AT5G09510.1|AT5G09510.2 40S ribosomal protein S15 (RPS15D) Identical to 40S ribosomal protein S15-4 (RPS15D) [Arabidopsis Thaliana] (GB:Q9FY64); Identical to 40S ribosomal protein S15-1 (RPS15A) [Arabidopsis Thaliana] (GB:Q08112); similar to RPS15 (RIBOSOMAL PROTEIN S15), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G04270.1); similar to Os03g0798600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051572.1); similar to ribosomal S15 protein [Retama raetam] (GB:AAL32040.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713)|Identical to 40S ribosomal protein S15-4 (RPS15D) [Arabidopsis Thaliana] (GB:Q9FY64); Identical to 40S ribosomal protein S15-1 (RPS15A) [Arabidopsis Thaliana] (GB:Q08112); similar to RPS15 (RIBOSOMAL PROTEIN S15), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G04270.1); similar to ribosomal S15 protein [Retama raetam] (GB:AAL32040.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713) -0.648562169353993 -6.85016819108208 3.36208491317281e-05 0.148167082123526 8.27611829404122 17.1055528909494 -0.648562169353993 0.084023891092791 AT5G23720_at 3.96750363038663 3.75280651079678 5.29309260337444 5.23610273148022 5.6862258665648 6.06977267142951 4.02898055154965 3.55984812165379 3.89492060885027 3.45846565204443 5.37960337870622 5.15223475447121 4.7429678077773 5.30949484539094 4.66038452610628 4.8468553001404 5.40489282080623 5.05592349720941 3.65764264680507 0.227246290939669 0.222240327257897 0.232185971187113 0.219384146096908 0.233500836516142 0.227689196069194 0.219169341109903 0.214544966976038 0.220223356657519 0.235227552100989 0.214691337014400 0.218456360840771 0.22004011459011 0.216374709990004 0.219032159473325 0.222288669481822 0.220119376886734 0.226404910837493 0.226741667187388 5 5 + 8001819 8002571 8002292.364 7998233 8002843 + gene protein_coding_gene TRUE TRUE AT5G23720.1|AT5G23720.2|AT5G23720.3 PHS1 (PROPYZAMIDE-HYPERSENSITIVE 1); protein tyrosine/serine/threonine phosphatase Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling. similar to dual specificity protein phosphatase (DsPTP1) [Arabidopsis thaliana] (TAIR:AT3G23610.1); similar to Os01g0347000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042966.1); similar to Os01g0311500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042862.1); similar to dual specificity protein tyrosine phosphatase 1 [Solanum tuberosum] (GB:BAE44441.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387)|similar to dual specificity protein phosphatase (DsPTP1) [Arabidopsis thaliana] (TAIR:AT3G23610.1); similar to Os01g0347000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042966.1); similar to Os01g0311500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042862.1); similar to dual specificity protein tyrosine phosphatase 1 [Solanum tuberosum] (GB:BAE44441.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387) 0.71850259891732 6.84728239794755 3.37455186000234e-05 0.148682754951703 8.2732959924461 9.0689853786841 0.71850259891732 0.111688799890390 AT5G40780_at 11.2387475150774 11.4521988814817 12.1486851400347 12.3120250275699 11.9683876633669 11.4283996993916 9.20722955961509 9.31542144877502 10.1174326108359 9.15080301950721 10.2800098603927 10.022808921035 9.6415434292532 10.6611324499046 9.63653514094001 9.82766718727717 10.0777212696548 10.1818986473404 7.80271502954279 0.111422819175604 0.111422819175604 0.121461219737011 0.115545106657886 0.114705880987440 0.122082561177999 0.116575585308735 0.112966665237014 0.115983926507227 0.119311894458092 0.111997345116472 0.111422819175604 0.114868528292645 0.111810098008983 0.118326563879201 0.111422819175604 0.115046000252697 0.114989261573983 0.143792222366314 5 5|0 +|/ 16343325 16344230 16343808 16340879 16344509 + gene protein_coding_gene TRUE TRUE AT5G40780.1|AT5G40780.2 LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid permease/ amino acid transporter|LHT1 (LYSINE HISTIDINE TRANSPORTER 1); amino acid transporter Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G67640.1); similar to LHT2 (LYSINE HISTIDINE TRANSPORTER 2), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G24400.1); similar to lysine and histidine specific transporter, putative [Arabidopsis thaliana] (TAIR:AT1G48640.1); similar to Os12g0244400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066488.1); similar to Os08g0127100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060901.1); similar to histidine amino acid transporter [Oryza sativa (indica cultivar-group)] (GB:CAD89802.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.703087663053794 6.84624937322516 3.3790267209879e-05 0.148846127059517 8.27228537572028 20.6662942835074 0.703087663053794 0.106049317145980 AT5G55210_at 7.46417549351786 7.53147320902137 8.77666270660262 8.8422226006844 9.06180000608147 8.8588687124994 7.83841476769075 8.08039263746845 5.42101236822608 6.71830410587264 8.27137047782574 8.13122557090758 8.69225232888752 8.0706351739593 8.1978475742223 8.74336746834554 8.44327971033732 7.77562529573924 6.98185072281214 0.200015064534454 0.197612175456113 0.1932960912198 0.199198041534607 0.192429108467185 0.208042925914027 0.200897450363289 0.203292208700290 0.241830428046041 0.199843097777283 0.197148131010408 0.193384579514285 0.196516359781384 0.204716068455844 0.198567090972986 0.192429108467185 0.214107147930881 0.199942014802284 0.196987180921656 5 5|0 -|/ 22414123 22414563 22414420.4 22413652 22414672 - gene protein_coding_gene TRUE TRUE AT5G55210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22320.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28485.1) 0.593621006339548 6.84356526261339 3.39068363043156e-05 0.149325707084206 8.26965869893492 15.6389626911950 0.593621006339548 0.0570192090807846 AT5G03140_at 6.51956755796985 6.99705270991816 7.05336551080335 7.32154380483033 7.36518591870631 7.27345984773852 7.8268055813514 8.22512129214445 7.76680942245119 8.1288317086069 9.06261149849505 9.09257381098857 8.85591009851515 8.81519063670425 8.55069942743373 8.74147025049927 7.71844724914681 8.18483135513977 8.34205189433984 0.194993543489492 0.183144523377235 0.188498541627983 0.178237868138041 0.177347823451675 0.187706891649605 0.175951294305128 0.173491602202113 0.176333150180418 0.174423660500376 0.173491602202113 0.173491602202113 0.177232967859998 0.176115585711601 0.173491602202113 0.176713777682210 0.179276272774228 0.181227830222304 0.180956539107736 5 5 - 737794 738312 738042 737589 740015 - gene protein_coding_gene TRUE TRUE AT5G03140.1 lectin protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G53380.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE83261.1); similar to Os05g0125200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054518.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.735684239327807 -6.83597863326491 3.42386640319805e-05 0.150752837732810 8.2622282416458 15.6762366775984 -0.735684239327807 0.118258616787642 AT5G19090_at 4.41329454897314 4.43780567211719 3.76731952047542 3.7813996051493 3.79937840323853 4.08500509467719 4.01382049116742 3.88740350561719 4.86464155111942 4.85203555817059 5.82216849168955 6.62393228377196 5.65246646213201 5.91505015819264 6.46288805860891 6.10193290593254 4.87770058481106 5.22388931999969 5.03721902827177 0.266562567554916 0.265107088604608 0.274328099368333 0.27455248571836 0.265143366467209 0.274390515470235 0.267710448894904 0.270089205243327 0.264441517144289 0.265342248431907 0.265812481793674 0.27521057006581 0.266683259476083 0.269911275172172 0.283741077869649 0.269361246706707 0.263892394323755 0.264572542011785 0.268539150925375 5 5 + 6389277 6389704 6389496.545 6387491 6390026 + gene protein_coding_gene TRUE TRUE AT5G19090.1|AT5G19090.2 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G06130.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71268.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96467.2); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121)|similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G06130.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71268.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.588157134264294 -6.83320844649431 3.43606970189878e-05 0.151255788277584 8.25951280857863 9.3996628113417 -0.588157134264294 0.0542748936731287 AT5G15810_at 5.75201437026426 5.6104772659989 6.49747992823059 6.2899718959804 6.31266860093068 6.19244505532877 5.8930980785458 5.94198626639691 4.30739367519069 5.25620064138988 5.34505156473435 5.65655266361473 5.32044992046474 4.89450599383845 5.69869947682197 5.3332025730155 5.18857386163449 4.55564433450389 5.284737604617 0.26254276349438 0.247799999593613 0.255910626926286 0.255340306382372 0.257455912346862 0.268210420700589 0.255056903098193 0.248758986887054 0.253894402702545 0.261015649498389 0.256957580463557 0.247799999593613 0.257160667894217 0.260835555212553 0.261339444859668 0.247963521092324 0.2659037471043 0.258215738251299 0.253753804434684 5 5|0 +|/ 5160229 5160946 5160601.444 5157801 5161361 + gene protein_coding_gene TRUE TRUE AT5G15810.1 N2,N2-dimethylguanosine tRNA methyltransferase family protein Identical to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC 2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) [Arabidopsis Thaliana] (GB:Q9LFU5); similar to RNA binding / tRNA (guanine-N2-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G02320.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96899.1); similar to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) (GB:Q9LFU5); similar to hypothetical protein [Cleome spinosa] (GB:ABD96937.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain N2,N2-dimethylguanosine tRNA methyltransferase; (InterPro:IPR002905) -0.579654945682024 -6.83129840602554 3.44451110800061e-05 0.151592933863107 8.25763981271433 11.1605321938651 -0.579654945682024 0.0489276956001156 AT5G13100_at 6.47244073706855 6.8903432099612 6.96592430099528 7.07323620631113 6.860681693139 7.18587800011346 7.427537330944 7.5991198382837 7.58193012533074 7.44121772410975 9.00197185098367 9.03042394552725 8.64934527616095 8.37704505124872 8.63335161049992 8.2500709685228 7.9417371530219 7.19520674314301 8.13635045723072 0.189344510865967 0.193169476657479 0.188668551760734 0.189844263291234 0.187930734232848 0.194838287776185 0.186160257220741 0.192592029203861 0.195956781781747 0.188172763668656 0.188166789011940 0.186145806496470 0.191871549204437 0.201275316995881 0.186945238009913 0.187598261418525 0.210306634107505 0.199402828396590 0.192181287015950 5 5 + 4157271 4158212 4157860.091 4156663 4158556 + gene protein_coding_gene TRUE TRUE AT5G13100.1 similar to Os01g0102500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041749.1); contains domain no description (G3D.3.40.109.10); contains domain NADH oxidase/flavin reductase (SSF55469) -0.680359715176586 -6.82643658447965 3.46609870177997e-05 0.152508342878319 8.25286967592507 15.1117585864915 -0.680359715176586 0.0981010114364188 AT5G46050_at 8.21799713127217 8.60566335853254 9.16108803290647 9.45749608312893 9.39858308532525 7.9456211344842 1.34249327871748 1.16501872528625 2.28055770263573 2.09781047237124 1.83089568172300 2.35907231052820 2.59496684711085 1.98340304580103 1.59050139355004 2.16538538631763 2.00365535615951 1.68463305483218 1.66523303703103 0.26388621472129 0.260957848145904 0.276479712044584 0.269081217023211 0.260508151804154 0.283063660256598 0.256160341961594 0.265052212091916 0.264412308459617 0.282752254769130 0.254866461713666 0.261699246325078 0.254120395580739 0.259277055608802 0.254834887777679 0.258236129138657 0.257271386787441 0.256990644311184 0.263977358963561 5 5 - 18692367 18692887 18692651.455 18692262 18696373 - gene protein_coding_gene TRUE TRUE AT5G46050.1 ATPTR3/PTR3 (PEPTIDE TRANSPORTER PROTEIN 3); transporter similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G46040.1); similar to putative nitrate transporter NRT1-3 [Glycine max] (GB:BAB19758.1); similar to Os10g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064823.1); similar to putative peptide transport protein [Oryza sativa] (GB:AAG21898.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 1.24472158865608 6.82629832925103 3.46671471050863e-05 0.152508342878319 8.25273397313843 8.93229403963106 1.24472158865608 0.267017148728404 AT5G39050_at 6.72858797575642 7.46161554165723 9.79432165053857 10.2384247607467 8.62141038577982 7.67086802532235 5.89089640365475 5.92929763209894 4.3240814803642 4.02080558289235 5.41133014605686 5.3603218545048 5.58652362153276 6.00337317932088 4.58529496126652 6.04387710952893 5.52925660941256 5.96884887949552 3.3715179832129 0.292821243462673 0.300846497513902 0.313491742735636 0.30822982269727 0.302773594707400 0.32195405677031 0.291729659477148 0.293721402479111 0.295003317822350 0.300858718740977 0.293173775350650 0.29108549153878 0.297565523085212 0.293566721165271 0.292976898118132 0.288726727729860 0.316820048194505 0.291480448094600 0.296121356126116 5 5 + 15652312 15652810 15652620.455 15651815 15653293 + gene protein_coding_gene TRUE TRUE AT5G39050.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39080.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 1.07363086329131 6.80968910277812 3.54158245873346e-05 0.155758796535098 8.23640931546972 12.5252136189258 1.07363086329131 0.221588534611252 AT5G04620_at 3.64658638484665 3.09496900458557 2.96548222944007 3.03161485633568 2.76807085790465 2.97583665054495 3.37057228562137 3.27660136069008 3.89882469703796 3.85919029984558 4.14977650779575 4.24821216529329 3.76136142664132 3.95690995171823 4.3485023167891 3.45633787572672 3.74019187274391 3.85221018385738 3.43243673334627 0.195057279249380 0.182052650420383 0.186756594962717 0.180151644137361 0.186958071818202 0.178738558214676 0.180935474242483 0.194567848136996 0.194634305560063 0.183093863632363 0.17813408543854 0.185269109992068 0.186509646052827 0.193059011556946 0.180852154023779 0.179225006372451 0.184597974936399 0.177767267270962 0.178216281805838 5 5|0 +|/ 1328845 1329880 1329454 1327116 1330028 + gene protein_coding_gene TRUE TRUE AT5G04620.1|AT5G04620.2 ATBIOF; transaminase|ATBIOF; 8-amino-7-oxononanoate synthase/ transaminase The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms. similar to LCB2 (Serine palmitoyltransferase LCB2 (long chain base) subunit gene), serine C-palmitoyltransferase [Arabidopsis thaliana] (TAIR:AT5G23670.2); similar to Os01g0736400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044174.1); similar to putative 8-amino-7-oxononanoate synthase [Oryza sativa] (GB:AAK31282.1); similar to Os10g0560900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065381.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) -0.693650761427921 -6.80896365149 3.54489189305397e-05 0.155868896537583 8.23569529504645 6.97588588590312 -0.693650761427921 0.103926842326735 AT5G44010_at 2.89999021504059 2.66770051475973 2.99302260646092 3.32275639673370 5.212363820398 4.07998500387506 1.73130514374084 1.33467224019360 1.62522217192567 1.89691451021174 2.5854779570932 2.29022237060734 2.70285482617621 2.58373200456876 2.89761939033096 2.30591816983083 3.15002915850536 2.86094834709529 1.50563654724972 0.273226289300602 0.282689967107403 0.278585648944166 0.287756943053386 0.294858883844749 0.297065669209831 0.28705634234701 0.281724715361653 0.302675641062222 0.28551235119827 0.271131396082615 0.271131396082615 0.276697090413319 0.271131396082615 0.280198598449339 0.281842216494870 0.274612226883755 0.284764480691250 0.273035149878898 5 5|0 -|/ 17724945 17725503 17725151.429 17724192 17726426 - gene protein_coding_gene TRUE TRUE AT5G44010.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD21667.1); similar to Os02g0814600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048494.1) 1.06424197460178 6.80818604338571 3.54844295513984e-05 0.155989552307947 8.23492984676788 5.20423683656115 1.06424197460178 0.219054827482674 AT5G56270_at 6.14270170950881 5.60576001909037 6.59731410030539 6.41238813669137 7.41763178836537 7.06102146933349 4.65254776708207 4.61549928653103 5.15416113772581 4.97799313419449 6.76885176874569 6.79585003378384 6.96117426368611 6.93700018750393 6.52556919606476 7.1698688537653 6.85108054993159 7.02278326957423 4.83132257535597 0.230211060121022 0.219761207200385 0.233887141301351 0.238659653980574 0.236687106154010 0.235598016769570 0.227579031864108 0.222224998388301 0.245762718695727 0.230478912198873 0.218254366602058 0.227971308960292 0.218254366602058 0.232065507210617 0.220923346011406 0.218254366602058 0.223569784208062 0.22119032170306 0.231538163550760 5 5 + 22799831 22800222 22800017.909 22796919 22800494 + gene protein_coding_gene TRUE TRUE AT5G56270.1 WRKY2 (WRKY DNA-binding protein 2); transcription factor WRKY transcription factor 2 Identical to Probable WRKY transcription factor 2 (WRKY DNA-binding protein 2) (WRKY2) [Arabidopsis Thaliana] (GB:Q9FG77); similar to WRKY34 (MICROSPORE-SPECIFIC PROMOTER 3), transcription factor [Arabidopsis thaliana] (TAIR:AT4G26440.1); similar to hypothetical protein [Solanum lycopersicum] (GB:CAC36402.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.725290467440712 6.79250395628849 3.62088020784255e-05 0.15913768513468 8.2194724627677 11.9965319751838 0.725290467440712 0.116223633384341 AT5G07340_at 7.70436357785041 7.55493876673199 8.83016241096787 8.9293900172274 8.62066208258488 8.44460854166234 5.78485358103448 5.43990864853147 5.4290473245609 5.48001620940258 6.64722685820014 6.6594773886858 6.73573496377173 6.50309442107086 6.93612050084606 6.02601154944916 6.20588095576986 5.96826445565247 4.74922680089164 0.263164151805524 0.259781572636987 0.259627652390636 0.267758646039140 0.259627652390636 0.259627652390636 0.263865968657277 0.261845479502846 0.270099902758002 0.270863689176365 0.259744284074985 0.259879017184073 0.262333671023452 0.259764177399916 0.259627652390636 0.259627652390636 0.272616726824104 0.259627652390636 0.272804738534879 5 5 + 2318621 2319415 2318985.545 2317214 2319650 + gene protein_coding_gene TRUE TRUE AT5G07340.1 calnexin, putative Identical to Calnexin homolog 2 precursor [Arabidopsis Thaliana] (GB:Q38798;GB:Q9LY26); similar to calnexin 1 (CNX1) [Arabidopsis thaliana] (TAIR:AT5G61790.1); similar to calnexin homolog (GB:AAA17742.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE80216.1); similar to putative papillar cell-specific calnexin [Brassica napus] (GB:AAK84429.1); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580) 0.620531022642478 6.78782860627666 3.64278268383744e-05 0.160063871127817 8.21485652893616 13.5034392024734 0.620531022642478 0.0738592252467513 AT5G47400_at 2.00466938677249 2.12813810132664 3.00503568661571 3.05967661857022 2.84627542864357 2.62933447166248 2.03328275621937 2.0465043977697 0.71391017995346 1.65736669762148 2.15900682965309 1.69863139721929 1.76917971021827 2.12438949226757 1.67101201061463 2.14180401799347 2.03587399751292 1.96130896843451 1.49010778702517 0.209758403157118 0.209922720246174 0.207085362287270 0.211435608572998 0.211806680506548 0.235512536821779 0.212572417222519 0.209367243504885 0.212328914696798 0.215205992565524 0.222256613476342 0.213574862631368 0.212284425666316 0.212712285105919 0.217733297411671 0.206710055338708 0.220661757646693 0.216475021517702 0.206710055338708 5 5 + 19247788 19248704 19248140.091 19246389 19248749 + gene protein_coding_gene TRUE TRUE AT5G47400.1 similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1) 0.569086810696264 6.78436657988757 3.65909293801233e-05 0.160743952766882 8.21143625480463 4.08525411820881 0.569086810696264 0.0442791209999326 AT5G53150_at 3.93086793288344 3.72719330009472 4.67021686839551 4.74532866719389 5.18595284721824 5.10871556683972 3.3090742896742 2.78850334398261 3.03732824605591 3.22883236689216 4.54343445227329 4.94869147270571 4.69611487443158 4.36150952328159 4.8743557392757 5.59026443119417 5.11503663584226 4.51065842444225 3.96812610439669 0.226731493954582 0.221061181011808 0.225595937778606 0.221858823377367 0.223379480967179 0.221840546528490 0.222731200543426 0.225289102903752 0.226944034417694 0.219962939524639 0.219962939524639 0.221890292455894 0.221876895946644 0.22045488374769 0.219962939524639 0.219962939524639 0.232691575313266 0.236813965443084 0.231492739981208 5 5 + 21573862 21574255 21574058.273 21572017 21574717 + gene protein_coding_gene TRUE TRUE AT5G53150.1 heat shock protein binding / unfolded protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25560.1); similar to Aminotransferase, class-II; Heat shock protein DnaJ [Medicago truncatula] (GB:ABE78703.1); similar to Os03g0401200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050318.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.676962852349119 6.78179826095821 3.67124350462158e-05 0.161241014722980 8.20889767542785 8.3039501520165 0.676962852349119 0.0985173382767597 AT5G16450_at 7.96745933565648 8.07173809472676 8.87226401251819 8.98919098962897 8.97894629810922 8.73619005926864 7.1717031378093 7.26090061416657 6.40150847485991 6.96573734748686 8.55160346322697 8.40793326498522 8.65955013233869 8.66306694936744 8.37762664744261 8.49972719015788 8.42215452760317 8.4060126427036 6.92410299899723 0.200213402946444 0.193537634233292 0.195143605209932 0.193023602568935 0.212418228872258 0.194389029534573 0.227920803230209 0.18967082500634 0.210423720624373 0.204381135576277 0.189017598499483 0.191902700528672 0.189304597408615 0.19327426368541 0.192659550114511 0.189212082035256 0.196920224224035 0.193448050031469 0.210825209769857 5 5 + 5374416 5375311 5374904.455 5373886 5375462 + gene protein_coding_gene TRUE TRUE AT5G16450.1|AT5G16450.2 dimethylmenaquinone methyltransferase family protein Identical to Regulator of ribonuclease-like protein 2 [Arabidopsis Thaliana] (GB:Q9FFE0;GB:Q8LEV6); similar to dimethylmenaquinone methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G02770.1); similar to Dimethylmenaquinone methyltransferase [Medicago truncatula] (GB:ABE89807.1); contains InterPro domain Protein of unknown function 1935; (InterPro:IPR010203); contains InterPro domain Dimethylmenaquinone methyltransferase; (InterPro:IPR005493) 0.579875538520507 6.77295234604465 3.71342620761022e-05 0.163056544776165 8.20014613730358 15.8871702140736 0.579875538520507 0.0523280101166094 AT5G67150_at 6.47122914672316 6.8427854036513 6.40304563380201 6.40780424719973 6.79209918392234 6.24125210799698 7.23879092606806 7.13078557525778 5.26021001575294 6.81956645522865 7.09155358963049 7.25789541160706 7.18430851754998 7.28503324303578 6.99416316484822 7.4446827621132 7.24685783373852 6.98476032439631 6.17167026474432 0.199952250920496 0.199794019118442 0.185506427602184 0.20630723221517 0.191078687454202 0.206011545313332 0.182528986256649 0.194592853334755 0.194711916631152 0.191226490532383 0.186108493507601 0.186560719444315 0.188961988703713 0.187304699872012 0.182528986256649 0.188241000635509 0.192411640564531 0.183976836997449 0.193312949643568 5 5 - 26813207 26813664 26813456.182 26812997 26814538 - gene protein_coding_gene TRUE TRUE AT5G67150.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G50280.1); similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus x domestica] (GB:AAV50009.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.723328322261195 -6.76698611328088 3.74217097733125e-05 0.164281305904842 8.19423650404572 13.3259602452978 -0.723328322261195 0.116497329449178 AT5G11670_at 11.3610432050214 11.3657232240405 12.0682522079762 12.0810986223133 12.1954419898388 11.9473579548357 10.6073837010596 10.4950330528056 10.4698063524908 10.4084288300713 11.6913772668446 11.6252566539467 11.6120114095084 11.6450525127579 11.4086016178158 11.4516171080192 11.2419926564978 11.6399427815448 10.2956214571267 0.0790999936250894 0.0732951919526204 0.077760486507275 0.0742721463278664 0.0732951919526204 0.0757723548142184 0.0775973844534922 0.0739434349320045 0.0800271353644968 0.0741245632092585 0.0739018030959109 0.0742591415214827 0.0745101155506123 0.0770828445561137 0.0732951919526204 0.0734086732525376 0.0813135459552426 0.075142569031076 0.0739021811740458 5 0|5 /|+ 3757027 3757963 3757542.75 3754250 3758243 + gene protein_coding_gene TRUE TRUE AT5G11670.1 ATNADP-ME2 (NADP-MALIC ENZYME 2); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis. similar to ATNADP-ME4 (NADP-MALIC ENZYME 4), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT1G79750.1); similar to ATNADP-ME3 (NADP-MALIC ENZYME 3), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT5G25880.1); similar to ATNADP-ME1 (NADP-MALIC ENZYME 1), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT2G19900.1); similar to NADP-dependent malic enzyme (NADP-ME) (GB:P12628); similar to NADP dependent malic enzyme [Phaseolus vulgaris] (GB:CAA56354.1); similar to NADP-malic enzyme [Aloe arborescens] (GB:BAA24950.1); contains InterPro domain Malic enzyme, NAD-binding; (InterPro:IPR012302); contains InterPro domain Malic enzyme, N-terminal; (InterPro:IPR012301); contains InterPro domain Malic oxidoreductase; (InterPro:IPR001891) 0.571640150325736 6.76659856738003 3.74404639599529e-05 0.164326196320233 8.19385243797333 22.4805502684513 0.571640150325736 0.0471888335779223 AT5G10190_at 7.41610851520976 7.77851735349605 8.83031953785678 8.79971019873243 9.46457110453377 9.03312680505197 6.61317261880886 5.90826646940759 6.10004757507843 5.31002800008387 7.2856551429674 7.32846829977198 7.03300927350334 7.44073254848715 6.58428075874941 7.41266249495798 7.02692151822077 7.18633712936277 5.20853927054950 0.2468881588894 0.24191403503339 0.244049970334426 0.241262627829504 0.244077290492379 0.24376647784016 0.250296147008403 0.243674383314813 0.264787954107634 0.248468374108521 0.244163313081468 0.242717392276384 0.247496683936711 0.250149302717163 0.243417516813748 0.241262627829504 0.262838602697393 0.244390358666314 0.24463052854355 5 5|0 +|/ 3200451 3200965 3200717.2 3199134 3201364 + gene protein_coding_gene TRUE TRUE AT5G10190.1 transporter-related similar to UNE2 (unfertilized embryo sac 2), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G78130.1); similar to 4D11_20 [Brassica rapa subsp. pekinensis] (GB:AAZ67534.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.842207854888368 6.7591933138073 3.78007686674888e-05 0.165869772912941 8.18650906512073 14.3313724142154 0.842207854888368 0.156259254295780 AT5G56160_at 1.7784161479296 1.54700729185699 2.79765298102499 2.87595431373975 3.64540655723239 2.78509761805302 2.04346558824116 2.00210726311771 1.72984723070204 1.78324355679344 2.65017406257266 2.27550074884858 2.70875627258568 2.85288597357994 2.67258752229750 2.76110385322353 2.73078874654956 3.04810012258526 1.73834434857797 0.203068305340951 0.203068305340951 0.21322448409353 0.206020456656185 0.208436039850057 0.215086887440831 0.206444978090504 0.215490565399508 0.212264315208176 0.212693527189284 0.206442277913472 0.208217442020761 0.203305212116460 0.204927194190046 0.210398840553410 0.203416863579317 0.223982719657681 0.203860568685216 0.203068305340951 5 5|0 +|/ 22751649 22752293 22752015.1 22749200 22752816 + gene protein_coding_gene TRUE TRUE AT5G56160.1 transporter similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G55690.2); similar to Os02g0721800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047963.1); similar to Os08g0341700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061591.1); similar to Cellular retinaldehyde-binding/triple function, N-terminal [Medicago truncatula] (GB:ABE79642.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273) 0.835256537854581 6.73736785883822 3.88845514278458e-05 0.170586527113960 8.16481493795645 4.6658712408852 0.835256537854581 0.154932076023797 AT5G01940_at 2.94036314923241 3.1057174372308 4.84325829174162 4.89116277763634 5.31639405822476 4.92701258319126 2.87648829175193 2.89540723703386 2.8119056328954 2.79019549575848 3.12354082882776 2.71761224027699 3.31841410386926 3.40712703784297 2.6317306334125 3.12902029359044 3.39213478255712 3.30931060769832 2.71065726263858 0.265787498265463 0.274570375598614 0.27691881312068 0.291981726137460 0.298174084241446 0.284632227584159 0.262386713173446 0.258714224134029 0.269371737051191 0.263830994963115 0.255748305168504 0.257125085903806 0.263096373292615 0.255748305168504 0.260442101688908 0.256194155629103 0.259837429229873 0.255866318396069 0.26760450522521 5 5|0 -|/ 363635 364554 363995.222 363591 364766 - gene protein_coding_gene TRUE TRUE AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein similar to EIF2 BETA (EMBRYO DEFECTIVE 1401) [Arabidopsis thaliana] (TAIR:AT5G20920.3); similar to eukaryotic translation initiation factor 2 beta subunit-like [Solanum tuberosum] (GB:ABB86256.1); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735) 0.615433997804635 6.7345510191606 3.90268430700504e-05 0.171171733705241 8.1620094853797 6.92424086814216 0.615433997804635 0.073749055591739 AT5G60670_at 8.69806550922202 9.02243490914709 8.9042765742342 8.76966536547477 8.4623657367161 8.67836733325836 8.94737817151633 8.95792502848036 8.36537882427582 8.73551787675118 9.27992238443514 9.76558098457483 8.87755037551267 8.73128941587346 10.0477359799840 8.77953011871537 8.91456753959786 8.91906351894109 8.67327297116817 0.136674402107790 0.134436662921778 0.134571310077620 0.138063748413078 0.137872510994435 0.143527201807223 0.134838500484517 0.132433517614176 0.152757747927133 0.141739444332323 0.136660224257604 0.136652978957720 0.143485299307818 0.138041928883221 0.149141625522633 0.136927280628096 0.142883808015252 0.150009624651543 0.140388707467510 5 5 - 24398296 24398768 24398526.727 24398136 24398819 - gene protein_coding_gene TRUE TRUE AT5G60670.1 60S ribosomal protein L12 (RPL12C) Identical to 60S ribosomal protein L12-3 (RPL12C) [Arabidopsis Thaliana] (GB:Q9FF52); similar to 60S ribosomal protein L12 (RPL12B) [Arabidopsis thaliana] (TAIR:AT3G53430.1); similar to 60S ribosomal protein L12 [Capsicum annuum] (GB:AAR83868.1); similar to Os02g0699600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047832.1); contains InterPro domain Ribosomal protein L11; (InterPro:IPR000911) -0.610562871489741 -6.73398848971048 3.90553260467844e-05 0.171257604715150 8.1614490774622 17.6829572937242 -0.610562871489741 0.0713740062479804 AT5G60680_at 10.0086388964692 10.2122569306341 11.2093844381770 11.3963383149337 11.7065346651886 11.5460348467612 10.4729267909832 10.6528686277620 9.98865262693078 9.68888638182428 11.3060571063236 10.9821826576884 11.3013773474704 11.2287990277161 10.9524227747875 11.0010954972760 11.1896732634184 10.7716785454778 9.77008116717603 0.0853917394607908 0.084004977074036 0.087179150356334 0.0852159077567334 0.0837542179619257 0.088916139461085 0.0833887677779874 0.0836773338003436 0.0941303394138074 0.0928390769848431 0.0826018688192628 0.0826018688192628 0.0853172194980831 0.0927104237171218 0.0847783775193815 0.0826018688192628 0.0845885080577057 0.084160657038481 0.0886840421872452 5 5 + 24403485 24403865 24403658.182 24403371 24404202 + gene protein_coding_gene TRUE TRUE AT5G60680.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45210.1); similar to Protein of unknown function DUF584 [Medicago truncatula] (GB:ABE80969.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 0.595125150360672 6.73056158602535 3.92293265406567e-05 0.171981367554239 8.15803400101651 21.3543900236120 0.595125150360672 0.063478590764581 AT5G65630_at 7.04121965632241 7.03633776912592 8.05359984763955 8.12244375596928 8.55524912188677 7.92678706425178 7.23360430606112 7.0531045325957 6.09491185767633 6.52786187088285 9.09857123362832 8.95669731532285 8.80799526558197 9.03548084783418 8.19711939895216 8.5661058832512 7.97169522601687 8.36446768350732 6.35493356016145 0.216049924397596 0.219321586283532 0.214044081531346 0.224600699697627 0.211359054596146 0.222400469331598 0.220815252999337 0.220065151665569 0.231281860241829 0.216430218307785 0.213882235782634 0.214961928345252 0.214309073940418 0.218137736387818 0.210378159714863 0.212579796489927 0.216272414551957 0.214619058944886 0.220246595745713 5 5|0 -|/ 26243560 26244223 26243931.556 26243058 26245675 - gene protein_coding_gene TRUE TRUE AT5G65630.1 DNA-binding bromodomain-containing protein similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT5G10550.1); similar to PSTVd RNA-binding protein Virp1a [Lycopersicon esculentum] (GB:AAG13810.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.710685063699152 6.7185236732863 3.98471861290404e-05 0.174650216803584 8.1460226859489 15.1031277748993 0.710685063699152 0.113783677368283 AT5G53420_at 8.68971245667238 8.73777601582461 9.7879553046835 9.77570082981976 9.99535919413708 9.50687429464104 8.18043883531087 7.83477617205681 6.62760371185318 7.4086118788124 8.46422428876858 8.61979759097506 8.63038385506201 8.64884701331166 7.87653355004898 9.31695006396105 9.17564479234299 8.58954571415125 7.00462585902944 0.193655031957436 0.181185792415029 0.187090840101558 0.191643993639955 0.189943376401699 0.194273659857951 0.188172594003745 0.187688218764097 0.238989396428679 0.190324691533241 0.181185792415029 0.185475579927732 0.188182668578283 0.187028357674170 0.196052699823437 0.187707854170444 0.190496311257157 0.193031478728935 0.221143082527147 5 5 + 21691906 21692642 21692215.273 21690751 21692959 + gene protein_coding_gene TRUE TRUE AT5G53420.1|AT5G53420.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.2); similar to CCT [Medicago truncatula] (GB:ABE82748.1); contains InterPro domain CCT; (InterPro:IPR010402) 0.6809134394291 6.68426779884294 4.16633583943473e-05 0.182568836484030 8.11171489060511 16.9030014754646 0.6809134394291 0.103913590834365 AT5G55380_at 2.78495260511275 2.27909063566132 2.08291970295407 2.03675604950907 2.55908263380114 2.52744072359455 3.12571765781285 3.26250065769134 3.52544159321699 3.23694196933083 3.55437782841174 3.75649084950638 4.08332599333809 3.52831290696132 3.71194312919889 3.36587927772831 2.94867415989009 3.34915078019474 3.41220471825438 0.211318153411968 0.215719887092777 0.220129385942758 0.216754283779494 0.211318153411968 0.223477970702051 0.211318153411968 0.213701100707492 0.220888023573095 0.216954273370852 0.222148625088386 0.213127786612283 0.211318153411968 0.214186028412297 0.219986524165092 0.212224445917727 0.222183168533750 0.224405576084931 0.224860126074548 5 5 - 22464272 22464640 22464462 22463850 22465124 - gene protein_coding_gene TRUE TRUE AT5G55380.1 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein [Arabidopsis thaliana] (TAIR:AT5G55370.1); similar to wax synthase isoform 1 [Vitis vinifera] (GB:AAO18664.1); contains InterPro domain Membrane bound O-acyl transferase, MBOAT; (InterPro:IPR004299) -0.649150720445131 -6.68148074725239 4.18149875351096e-05 0.183191460391315 8.10891528992384 6.04670697956102 -0.649150720445131 0.091201320742681 AT5G13400_at 5.60570125309234 5.67188686294265 6.9606119392903 7.15970398826105 8.5687968813041 8.22156546461348 7.0308297352999 7.12974152605192 7.38847900276753 7.20399474819607 9.74655907446478 9.51673118822745 9.26147287676914 9.29245666318909 9.27126858737423 8.33406925043167 7.98581866916463 9.10263398754777 7.25130445091358 0.230578973706587 0.220311131725236 0.224405211985102 0.233753427782994 0.222615093154161 0.225980797045163 0.220739132366375 0.220240708901185 0.232486717767013 0.217354592629625 0.220903774006234 0.219933512600705 0.224092699991842 0.222439515085322 0.221498478793134 0.215672089924460 0.222212844735497 0.218514325676005 0.222359853016856 5 5 - 4296910 4297392 4297157.727 4296691 4299226 - gene protein_coding_gene TRUE TRUE AT5G13400.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT5G01180.1); similar to Os01g0103100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041755.1); similar to PREDICTED: similar to solute carrier family 15, member 4 [Canis familiaris] (GB:XP_548544.2); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.607028446148468 6.67541824440999 4.21468693868629e-05 0.184603287914460 8.10282115585161 15.2161725502429 0.607028446148468 0.072263818729962 AT5G67520_at 5.81644421579742 5.38587916873137 8.88304196257136 8.64638242524532 9.0368923162996 8.62422512922995 6.91082255789911 6.53568424825267 7.99755747082387 6.9713876504346 8.21014396402663 6.86309556882514 8.03518114104103 8.65941731103418 6.80256900734418 9.421273109476 8.71165683038176 7.78262416180183 6.79328925979093 0.225008447034759 0.214709544128776 0.218339482380289 0.213760792948784 0.217511044978960 0.209552615756312 0.207069771301235 0.207093138708044 0.210456347305172 0.212391121395399 0.206576500258297 0.205762384222287 0.2033480298596 0.205687576153115 0.210993166630166 0.216312065256039 0.204112232240505 0.209419836922221 0.2033480298596 5 5 + 26957204 26958035 26957554.909 26956385 26958172 + gene protein_coding_gene TRUE TRUE AT5G67520.1 adenylylsulfate kinase, putative similar to AKN2 (APS-KINASE 2), ATP binding / kinase/ transferase, transferring phosphorus-containing groups [Arabidopsis thaliana] (TAIR:AT4G39940.1); similar to Adenylylsulfate kinase [Medicago truncatula] (GB:ABE85872.1); contains InterPro domain Adenylylsulfate kinase; (InterPro:IPR002891) 0.747744197782533 6.67490003021434 4.21753692384193e-05 0.184685941895038 8.10229996227232 15.1373331348823 0.747744197782533 0.128622458901683 AT5G14930_at 6.30072743581703 6.50167634372005 7.42853122073046 7.57981681371174 7.05651452984804 6.69318007428838 4.04225769318973 3.79880432458432 4.46456034184806 4.55705904051124 6.37185192214376 6.22366131742402 5.90946719076963 6.38974400956759 5.58878588309027 5.90696136348332 6.04930010723505 5.7084708172192 5.22178051830318 0.226483152714637 0.220321001269114 0.222108097158093 0.228763868236839 0.220424727161705 0.225060765115378 0.223067874928394 0.227483908483554 0.247741525221914 0.240319811505644 0.217131048625863 0.222916230021657 0.223554004731356 0.216471328581684 0.22883866359966 0.22783790622192 0.219623844976318 0.226848610299863 0.233960125657282 5 5 + 4830181 4830725 4830415.909 4828643 4830958 + gene protein_coding_gene TRUE TRUE AT5G14930.1|AT5G14930.2|AT5G14930.3 SAG101 (SENESCENCE-ASSOCIATED GENE 101); triacylglycerol lipase|SAG101 (SENESCENCE-ASSOCIATED GENE 101) encodes an acyl hydrolase involved in senescence . |similar to PAD4 (PHYTOALEXIN DEFICIENT 4), triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT3G52430.1); similar to phytoalexin-deficient 4-1 protein [Solanum tuberosum] (GB:AAW82883.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to PAD4 (PHYTOALEXIN DEFICIENT 4), triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT3G52430.1); similar to unknown [Medicago sativa] (GB:AAZ32879.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.639214104512175 6.67265280014702 4.22991984120153e-05 0.185185890647803 8.100039309735 11.5583537011133 0.639214104512175 0.0873110538892804 AT5G08570_at 10.1928398700289 10.2255588789685 10.3570732899855 10.3078883575576 10.4309295129091 10.1525913884498 10.9015470000722 10.9871937103859 9.83042744804473 10.2528896742121 10.3741257791148 10.6382882629109 10.5237700095261 10.4414153314609 10.5042650501539 10.5240352844843 10.4088411043130 10.3563220609752 10.1459967325522 0.0852826658075545 0.0834894626811349 0.0851141993003591 0.0822065494057945 0.083316364220493 0.0876870219563851 0.0861709893676192 0.088848102046364 0.0890792696583462 0.0895324711607759 0.0886591384531265 0.0829137594504831 0.0854269830801547 0.0856011029095097 0.084410048826183 0.083345397854083 0.0920665050240142 0.08554013524728 0.0856220978529793 5 5 + 2779818 2780213 2780026.818 2778001 2780442 + gene protein_coding_gene TRUE TRUE AT5G08570.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63680.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56350.1); similar to pyruvate kinase [Glycine max] (GB:AAM94349.1); similar to pyruvate kinase [Glycine max] (GB:AAM94348.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42806); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) -0.568761580342105 -6.65928615721688 4.30438620980768e-05 0.188402984403282 8.08657594552224 20.7183631570299 -0.568761580342105 0.0514229135567843 AT5G19290_at 8.85860333119812 9.0082032319526 8.68221124181424 8.6063696930529 9.47210927192613 9.57180690821144 9.67807554495778 9.82626324423895 9.66931595136228 9.66162437621478 10.6455272735144 10.8608007191674 10.4053102816676 10.2834549615571 10.2953966613338 10.3142611847177 9.46634025234678 10.3436953800659 9.9875032858572 0.141646014577607 0.131722020336747 0.13940432545376 0.150362428332041 0.129287039982976 0.152001642133714 0.130085155060509 0.133424932374785 0.145779335666410 0.133307478375603 0.133463326852363 0.130420343477335 0.132206782415653 0.133161534035295 0.134959994833819 0.129729010654169 0.150575132552015 0.133850380076530 0.133013906817719 5 5 + 6494556 6495027 6494754.818 6494057 6495286 + gene protein_coding_gene TRUE TRUE AT5G19290.1 esterase/lipase/thioesterase family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G14980.1); similar to Os01g0317800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042883.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46702.1); similar to Alpha/beta hydrolase [Medicago truncatula] (GB:ABE84979.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.555127550187059 -6.64709107666131 4.37355570003326e-05 0.191386797433455 8.07426737392582 19.2627867469729 -0.555127550187059 0.0424006118156486 AT5G10210_at 1.31172550139252 1.22813681703907 2.58047593878721 2.98072726910584 2.12216522308504 2.72709138448916 1.75524860370334 1.76433706856826 1.22678048005925 1.57328803831193 2.17214987226165 1.06857376813493 2.22182921797153 2.10387626989647 1.31861069807765 2.11298198501919 2.65874871720676 2.74938037244394 1.28633139412156 0.196889530538209 0.200462416157821 0.209002652324848 0.205393993500504 0.196889530538209 0.196889530538209 0.201286322999184 0.201906750976787 0.209097866638417 0.201800137544821 0.196889530538209 0.204349848113314 0.201493633919504 0.197486849449873 0.203547002860719 0.196889530538209 0.209200096271104 0.204687071220466 0.209552216009783 5 5 + 3206241 3206801 3206411.091 3206141 3207137 + gene protein_coding_gene TRUE TRUE AT5G10210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65030.1); similar to 80A08_18 [Brassica rapa subsp. pekinensis] (GB:AAZ67603.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.736950366094698 6.63630537070853 4.43572721269008e-05 0.194063065555191 8.063361187838 3.76518955916669 0.736950366094698 0.126366223833525 AT5G35260_at 3.55063438356257 3.17180321289831 3.62415540438069 3.49169600604654 3.22717484905745 3.38065142673738 3.04904415248434 3.05771530247457 4.07084647063576 4.07176518429554 3.77351632620353 3.82230528992760 3.59986219606007 4.13195292493143 3.48103969355594 3.90981833871846 3.6506729768824 3.80658826314925 3.72630190922502 0.174050762987490 0.173793617807643 0.17327515228328 0.175783017802892 0.171404400822154 0.186843724224105 0.178722104411360 0.175041944292939 0.181777493665262 0.174230576017772 0.180211775799305 0.172678539223619 0.179541738547650 0.171403886134278 0.171403886134278 0.175142669331388 0.175094271278708 0.177681145370170 0.173004536786199 5 0|5 /|+ 13522486 13522490 13522488.25 13521868 13523201 + gene protein_coding_gene TRUE TRUE AT5G35260.1 replication protein-related similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT4G07440.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.607482599852793 -6.63372321370207 4.45075188038943e-05 0.194675887248234 8.06074738439148 7.18324635348724 -0.607482599852793 0.0743709936480907 AT5G08430_at 7.35106756315317 7.36050179293616 7.6726083253579 7.64789609518556 8.16637646685416 7.84666803304816 7.82862157908787 7.74583884992796 7.30998569539995 7.89641338306857 8.07921136580089 8.47669627332875 8.27384850284876 8.31115006191676 7.7315739852985 8.5009532517466 8.39825809569193 8.3001201716912 8.1867674041516 0.185911827703211 0.18757873012346 0.194950467473592 0.192998209814422 0.183389544782136 0.190438525425555 0.181943653293588 0.185803758252780 0.240981577118245 0.185802827601063 0.186456024167119 0.181098891753174 0.181851234044023 0.191087939293132 0.20675638450614 0.183278585251098 0.195517353852255 0.189167495973243 0.186565350512884 5 5|0 +|/ 2718932 2720069 2719574.8 2716701 2720213 + gene protein_coding_gene TRUE TRUE AT5G08430.1 SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein Identical to Protein At5g08430 [Arabidopsis Thaliana] (GB:Q9FT92); similar to zinc finger (C3HC4 type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G63700.1); similar to CPRF interacting protein [Petroselinum crispum] (GB:CAC00636.1); similar to Os01g0884500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045018.1); contains InterPro domain Plus-3; (InterPro:IPR004343); contains InterPro domain GYF; (InterPro:IPR003169); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) -0.57527961037059 -6.62611347929963 4.49534919954578e-05 0.196581620496137 8.05303808340256 15.7307966504008 -0.57527961037059 0.0573347003965912 AT5G10920_at 5.29810048846275 5.75943416543796 5.86575494272867 6.31481329852132 5.15936582422377 5.75223186159066 6.79715121830314 7.05240216165507 5.26460888349827 5.52828006934163 6.00816514003475 6.95107119485885 6.04988841857765 5.98884553694532 6.69684953774179 6.1298605202989 6.51816277855743 5.52417038180586 5.3918976487697 0.225809452140236 0.228446638802110 0.213969519685476 0.222236736100881 0.219804624437257 0.240787632058931 0.223378223812230 0.216885041120457 0.231634343614053 0.228535876990527 0.221047104595259 0.216070800025939 0.217053482228192 0.215832638875144 0.225940420590869 0.213969519685476 0.224351626843198 0.225031814913916 0.226166932553723 5 5 + 3443214 3443867 3443531.818 3441753 3444143 + gene protein_coding_gene TRUE TRUE AT5G10920.1 argininosuccinate lyase, putative / arginosuccinase, putative similar to strongly similar to ar (GB:CAJ75323.1); similar to Os03g0305500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049883.1); contains InterPro domain Argininosuccinate lyase; (InterPro:IPR009049); contains InterPro domain Fumarate lyase; (InterPro:IPR000362); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Delta crystallin; (InterPro:IPR003031) -0.829614360191662 -6.62006830335778 4.53111954957604e-05 0.198100546707464 8.046907098724 11.8140595230183 -0.829614360191662 0.157767147227264 AT5G07770_at 5.92697849439649 5.79106804338356 6.02709559749368 5.91225900424873 5.42949941417736 5.65005905570717 3.56887036225342 3.68297772062873 4.66960575702816 4.35585095651113 4.14375418368363 4.62295437562581 3.94999518519581 4.06046487391224 4.00838196424708 3.87941124900061 4.91815524651111 4.46017732269174 4.75642184967697 0.284688252763253 0.280507460048157 0.291394921214541 0.287622518851248 0.292285763060059 0.280839915892291 0.279435544082223 0.283754161052655 0.279435544082223 0.279435544082223 0.282106892764587 0.279435544082223 0.283318325844305 0.279435544082223 0.282955609112396 0.279710404868830 0.280546212009154 0.283752583154362 0.286473976732443 5 5 + 2478604 2478990 2478811.5 2474643 2479338 + gene protein_coding_gene TRUE TRUE AT5G07770.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07780.1); similar to putative diaphanous homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC55695.1); similar to Os07g0596300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060171.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) -0.567161687324102 -6.61478949936557 4.56260532771064e-05 0.199431478874232 8.04154849923016 9.67328662212644 -0.567161687324102 0.0528670352877007 AT5G25820_at 2.91738279390786 3.14606131274281 4.77624891810936 4.7147120990727 3.47858649564218 3.77027977200757 1.89252907120903 1.72951671073195 2.27821012017261 2.16006298126307 2.07715278342908 1.78343630776497 2.42648470340675 2.45031254520233 2.293440050109 2.28796807946632 2.81816656348842 2.43272187794272 2.07474802164069 0.246233269554297 0.255272312887555 0.269678840988136 0.274585129613358 0.254936548899044 0.263981728507780 0.244138312853387 0.249562451966386 0.248673148748156 0.244396149633609 0.248688474036122 0.245690226051204 0.249104274124007 0.245989032898354 0.253744717111398 0.246711272605414 0.247754913440621 0.244138312853387 0.248688169683002 5 5 - 8997256 8997793 8997578.818 8997186 9000318 - gene protein_coding_gene TRUE TRUE AT5G25820.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G32790.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE81272.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.598416568361828 6.6107995124098 4.58655984273034e-05 0.200432665127316 8.03749518701773 5.54927334911626 0.598416568361828 0.0708761093666105 AT5G58290_at 10.6617878018046 10.8462255215823 11.7129627950646 11.7210101005298 11.5422648863216 11.5438405799473 10.2015941201899 10.2366823603040 9.64896293095602 9.87930489912893 10.8965798896281 10.8399336002060 10.8530774141098 10.8504275408535 10.8752354266161 10.8546681851612 10.9618579459660 10.7286988400344 9.58988298316973 0.0936207272023094 0.0924066427076002 0.0927948188285037 0.0925946708471044 0.0924066427076002 0.0984709918928494 0.0938903912933168 0.0942333452758274 0.0986421775960854 0.0924066427076002 0.09319041093185 0.0927968584105985 0.0960772055005671 0.0946130769471394 0.0961753617318344 0.0924066427076002 0.0955334435398855 0.096596690177226 0.106500644256719 5 5|0 +|/ 23587119 23588277 23587603.1 23586288 23588566 + gene protein_coding_gene TRUE TRUE AT5G58290.1 RPT3 (root phototropism 3); ATPase 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, Identical to 26S protease regulatory subunit 6B homolog (26S proteasome AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) (RPT3) [Arabidopsis Thaliana] (GB:Q9SEI4); similar to RPT2A (regulatory particle triple-A 2A), ATPase [Arabidopsis thaliana] (TAIR:AT4G29040.1); similar to 26S proteasome regulatory particle triple-A ATPase subunit3 [Oryza sativa (japonica cultivar-group)] (GB:BAB78494.1); similar to AAA ATPase, central re (GB:ABE77697.1); similar to 26S protease regulatory subunit 6B homolog (GB:P54778); contains InterPro domain 26S proteasome subunit P45; (InterPro:IPR005937); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.540156526733677 6.60161004394663 4.64224579706118e-05 0.202819718873603 8.02815000148033 21.3401010839214 0.540156526733677 0.0325212486057784 AT5G14610_at 4.04752955265108 4.30870400298814 4.02232417577223 4.1020498616896 4.55451439399857 4.13195152335342 4.61444105802619 4.36795368690665 4.76356537251904 4.78015282580002 4.81331550462635 5.91717510285173 5.12539430874053 5.36492658778581 6.49798824847842 4.92782654587433 5.12276959728896 5.39854999158354 4.89751179895463 0.229523718977962 0.229423480233891 0.219139944477553 0.219139944477553 0.219957668239292 0.227373416693105 0.226380200859465 0.225120252894637 0.227350057736442 0.228845890535791 0.222006562386386 0.227769175856721 0.222436685050039 0.228187532902524 0.222424232258355 0.223086995523894 0.22462372050004 0.219139944477553 0.222899694194188 5 5 + 4713969 4714618 4714316.3 4710566 4715072 + gene protein_coding_gene TRUE TRUE AT5G14610.1 ATP binding / ATP-dependent helicase similar to DRH1 (DEAD box RNA helicase 1) [Arabidopsis thaliana] (TAIR:AT3G01540.1); similar to P72 DEAD box protein [Pisum sativum] (GB:AAF04377.1); similar to WW/Rsp5/WWP; Helicase, C-terminal [Medicago truncatula] (GB:ABE92110.1); similar to Probable DEAD-box ATP-dependent RNA helicase 46 (GB:Q9LYJ9); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain WW/Rsp5/WWP; (InterPro:IPR001202); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) -0.654415586249111 -6.59424814457792 4.68738116574353e-05 0.204744809319678 8.02065341446973 9.37355181608737 -0.654415586249111 0.0969544344511528 AT5G51590_at 3.87806423514181 3.95540573699312 4.28629349939931 4.32727031836686 3.60381617270352 4.10492258738028 3.71413763958577 3.8958082459308 3.94093142740872 4.0872142478536 3.64931647550061 4.30400856952879 4.14409756325890 3.96608742040895 3.80563934541271 3.67427902786499 4.4720291346205 4.25532699142698 4.13970636079909 0.232016871841694 0.237710667645648 0.226415559141704 0.253196625308356 0.230808628278897 0.239520056808047 0.254427365755405 0.243914879101819 0.23772511476804 0.231289466649072 0.242797538309024 0.229890732071792 0.235413503424753 0.230826211169714 0.248135079876991 0.23878821622411 0.238770853961746 0.231607359565964 0.226483245116737 5 5 - 20974089 20974842 20974363.545 20973793 20976339 - gene protein_coding_gene TRUE TRUE AT5G51590.1 DNA-binding protein-related similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT4G25320.1); similar to HMG-I and HMG-Y, DNA-binding [Medicago truncatula] (GB:ABE87426.1); similar to Os08g0118000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060866.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) -0.645187927296538 -6.58549836421628 4.74163957931168e-05 0.207067400428541 8.01173204408145 8.01561417678266 -0.645187927296538 0.0934771799786297 AT5G50450_at 7.15429799092905 7.22020874485373 4.78468571560678 4.64971244405662 7.84811482171648 7.12691217975956 2.08071883774904 1.83559187111945 1.18152627464144 1.54008161729963 2.49859562618315 3.09871906068971 2.55388942054359 2.97883582791293 2.84806296365278 2.04840809272750 2.98530197761868 2.11546801147443 1.35854920173190 0.322850792983939 0.322774681934395 0.297167984823949 0.313692407454371 0.327903480448019 0.320756764386196 0.275984757189468 0.279273842757971 0.277767919839127 0.280774283293709 0.276591182403776 0.273549649253127 0.276666411833674 0.281993061867164 0.271093399483342 0.269543911294976 0.27576246908411 0.285350154188504 0.286219551594142 5 5 - 20560778 20561243 20561088.818 20560536 20561979 - gene protein_coding_gene TRUE TRUE AT5G50450.1 zinc finger (MYND type) family protein similar to zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67340.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD88375.1); similar to Os01g0921800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045230.1); similar to Os04g0385600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052618.1); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Sel1-like; (InterPro:IPR006597) 0.752994808914321 6.57407236649473 4.81351160568732e-05 0.210157916704308 8.00006312950813 7.33801156930284 0.752994808914321 0.134358028565676 AT5G42570_at 6.60375156753991 6.65844778839356 7.51745508520482 7.92452233779392 7.25122829769997 7.2163864359827 5.7917073965611 5.87801524493188 4.37899255861702 4.43761922672660 6.0673322614924 6.858366515683 6.1408769108755 6.19689584767431 6.4450650085085 6.6665219361508 6.47847501701675 6.5373684768385 4.36789122724656 0.237284952451755 0.232959890393164 0.247811142455320 0.23560072734753 0.232959890393164 0.248321723883545 0.236999752382343 0.246123927410260 0.272898221304182 0.239621704969544 0.239407436712068 0.232959890393164 0.235902516282819 0.241884032329314 0.242649530710604 0.232959890393164 0.249225938514822 0.245438900494917 0.242644495690423 5 5|0 -|/ 17039029 17039636 17039492.7 17038538 17039811 - gene protein_coding_gene TRUE TRUE AT5G42570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48660.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69146.1); similar to Os02g0321800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046689.1); similar to Os05g0272900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055067.1); contains InterPro domain B-cell receptor-associated 31-like; (InterPro:IPR008417) 0.598686599976937 6.57026262861188 4.83773513365557e-05 0.211167138584065 7.99616764724329 12.2645378114185 0.598686599976937 0.0728801435493826 AT5G17790_at 4.03295693903503 4.28051079214623 4.61955046604836 4.59941336809839 4.53092053600881 4.69840338922885 5.41449125804302 5.25699516112817 4.11891879383351 4.92960646307997 5.18375118268189 5.82308734634084 5.10663318065281 5.28239543257407 5.88946987340743 5.59206016466044 5.49740979261816 5.45217049316576 4.95593030928993 0.211893357449436 0.211776391999118 0.213932443657124 0.214076345572652 0.222111764120633 0.209763092935893 0.212554342632289 0.21826210950716 0.214744922900637 0.210123440067465 0.211368693078085 0.208984033860651 0.216929963979993 0.214031152825336 0.210598334260587 0.22027075711367 0.213809140134220 0.207238790574670 0.214991326887613 5 5 - 5869822 5870377 5870096.545 5869712 5872720 - gene protein_coding_gene TRUE TRUE AT5G17790.1 VAR3 (VARIEGATED 3); binding Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells. Identical to Zinc finger protein VAR3, chloroplast precursor (VARIEGATED 3 protein) (VAR3) [Arabidopsis Thaliana] (GB:Q8S9K3;GB:Q64M74;GB:Q9FN73); similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT1G55040.1); similar to Zinc finger, RanBP2-type [Medicago truncatula] (GB:ABE90693.1); similar to Os01g0815700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044614.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) -0.571989004892708 -6.56469951516911 4.8733426919115e-05 0.212672675075018 7.99047505686194 9.75241725804901 -0.571989004892708 0.0585692099734982 AT5G20070_at 7.90017938727163 8.06710271408493 8.67036841786006 8.78533905249265 8.78632305673097 8.45197839889227 9.36068718703118 9.37566226412242 8.97028951361753 9.37711752668055 9.60213869099934 9.7063778929378 9.5482586758358 9.6256679834751 9.50535630034348 9.59193964959013 9.47004430951768 9.54417279681855 9.27362127247661 0.129315805613427 0.129266001105704 0.119546688611618 0.132810428588710 0.115355824242722 0.119788952322575 0.113174192072040 0.125445175011246 0.123859136279015 0.119705505000800 0.115206286447034 0.113763760271131 0.117184629355843 0.122033761748373 0.118903851101009 0.113174192072040 0.122027971095688 0.120668255733624 0.120034208363647 5 0|5 /|+ 6781016 6782275 6781901.4 6779856 6782484 + gene protein_coding_gene TRUE TRUE AT5G20070.1 ATNUDT19 (Arabidopsis thaliana Nudix hydrolase homolog 19); hydrolase Identical to Probable NADH pyrophosphatase NUDT19, chloroplast precursor (EC 3.6.1.22) (Nudix hydrolase 19) (AtNUDT19) (NUDT19) [Arabidopsis Thaliana] (GB:Q94A82); similar to Isopentenyl-diphosphate delta-isomerase, type 1 [Medicago truncatula] (GB:ABE86498.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086) -0.587702925316995 -6.55915087070636 4.90913821320647e-05 0.214185700242198 7.98479222019272 18.0653320473264 -0.587702925316995 0.0677111058550216 AT5G39740_at 9.94809773096376 9.8787629230423 9.8884940180914 10.0156054049467 9.9238432224146 9.8482551501981 10.1646541121506 10.1313910758757 9.39343934971348 9.15615181471308 9.57105752675928 10.0529665614077 9.5222338183201 9.49158903125243 10.3265215000003 9.35966851723196 9.51435530948194 9.42296841096595 9.117215942406 0.0797010353844937 0.0752364350453261 0.078600963841022 0.0797279444981193 0.077360153101884 0.0765633340621652 0.0796707542630757 0.0755299486879427 0.0806037131347014 0.0753016893624765 0.078426802014811 0.0767954216186949 0.0769190615104505 0.0788390439771198 0.0779702870724295 0.0754913526000537 0.0777605649815724 0.0783177553274852 0.0820424386029556 5 5|0 +|/ 15921515 15922050 15921780 15920524 15922690 + gene protein_coding_gene TRUE TRUE AT5G39740.1 60S ribosomal protein L5 (RPL5B) Identical to 60S ribosomal protein L5-2 (RPL5B) [Arabidopsis Thaliana] (GB:P49227;GB:Q41921); similar to ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G25520.1); similar to 60S ribosomal protein L5 (GB:Q6UNT2); contains InterPro domain Ribosomal protein L18P/L5E; (InterPro:IPR005484); contains InterPro domain Eukaryotic ribosomal protein L5; (InterPro:IPR005485) -0.532629696116528 -6.55147227968677 4.95914107530599e-05 0.216317733704847 7.97691959626549 19.4148575147295 -0.532629696116528 0.028845988978033 AT5G19920_at 2.58132882056694 2.42954095541064 3.75156282033620 3.51166392673893 2.86573958965996 3.48020265829092 2.26357507873987 2.12124961771759 1.87775300992847 2.18513162241274 3.39720717534868 3.42649596597198 2.64669731573963 2.88070685138974 3.63265062609895 2.98736061809684 3.46049741678801 2.93802015704964 2.24322288992852 0.226824809566818 0.227873771864854 0.239255734516148 0.233102907614996 0.236416605002396 0.235648063532366 0.235891392355937 0.237616038924874 0.232391650571154 0.235439384400944 0.232811874257946 0.231043021401138 0.233108335491835 0.245896557663259 0.244556271027594 0.231933796136001 0.236189693611997 0.240525118417006 0.240052363088239 5 5|0 -|/ 6733650 6734226 6733886.7 6733218 6737375 - gene protein_coding_gene TRUE TRUE AT5G19920.1 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G50970.1); similar to WD40-like [Medicago truncatula] (GB:ABE80202.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.708814029813153 6.54980633334986 4.97006174489021e-05 0.216744392694662 7.97521027524844 5.51222811171614 0.708814029813153 0.119697350544720 AT5G66880_at 9.0515019846773 8.95336356837211 9.4999187278472 9.44261123648943 10.3011744205348 10.0107173240872 7.68320478872102 7.85620595334684 7.38655835342232 7.52715568648857 8.82836581420597 8.68484809588896 9.17581806952215 8.65784299697217 8.85730849700176 8.9250097422563 9.27261595171331 8.83257211883684 7.70418513037238 0.122065364131487 0.122242012409847 0.126528139276467 0.121369491490129 0.131721641617119 0.123552318692443 0.126733881159123 0.131858769972501 0.132453739131363 0.137809914264019 0.123754319899417 0.129963037058478 0.125933744359113 0.129966458409071 0.124834760437428 0.127624899163464 0.127548803006456 0.124989665782073 0.134782251955882 5 5|0 +|/ 26729178 26729830 26729562 26727781 26730196 + gene protein_coding_gene TRUE TRUE AT5G66880.1 SNRK2-3/SNRK2.3/SRK2I (SNF1-RELATED PROTEIN KINASE 2-3, SNF1-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth. similar to SPK-2-2 (SNF1-RELATED PROTEIN KINASE 2-2, SNF1-RELATED PROTEIN KINASE 2.2), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT3G50500.1); similar to Os03g0764800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051371.1); similar to serine/threonine protein kinase SAPK8-like protein [Solanum tuberosum] (GB:ABA40436.1); similar to Os03g0610900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050653.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.575968779623508 6.54881523408628 4.97657088549641e-05 0.216978490607643 7.97419315550374 17.3216359426232 0.575968779623508 0.0617225666400406 AT5G08020_at 1.32897884283729 1.26691281623668 2.51309396899428 2.26124011407234 0.89162970937597 0.979876188783517 1.79353173272060 1.78788860025441 0.90382058943025 1.11712338023449 1.98386728543901 3.06184142533039 1.51288770287218 2.39251030024023 2.65592072096466 1.47964280145171 1.80755593916963 1.57810871563540 0.543373331335724 0.210688282237906 0.206849294552793 0.212954140445636 0.211663471397765 0.205149691915124 0.202352459684096 0.206984750537187 0.201366365893253 0.203019948319212 0.212316344532684 0.207030544769924 0.208509558058511 0.206084508657073 0.210704853818840 0.201040476882936 0.216175216886253 0.21106784061342 0.224418053629909 0.203074444283379 5 5|0 +|/ 2574009 2574806 2574374 2572108 2574880 + gene protein_coding_gene TRUE TRUE AT5G08020.1 replication protein, putative similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT5G61000.1); similar to Os03g0214100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049369.1); similar to replication protein A1 [Oryza sativa] (GB:AAB71836.1); similar to replication protein A 70b [Oryza sativa (japonica cultivar-group)] (GB:BAC77529.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.552887350523228 6.5407466343423 5.02990414114528e-05 0.219253521512523 7.9659067185816 3.05980114418675 0.552887350523228 0.0474251378996144 AT5G55850_at 9.44893586293998 9.64888132611403 10.7459677064465 10.7170558305509 10.6685132791556 10.4782159326827 8.68324367209746 8.7822659614668 9.45879381486988 8.64563392511224 10.3515327975900 9.8541135569636 9.8360844937959 9.81708535492924 9.69579969759481 10.024148359932 9.97099838567882 9.84048108451245 8.65879539899234 0.153747165986142 0.145352407316978 0.144423515513088 0.144074513823727 0.144461549049289 0.148622965422627 0.157480982277557 0.150702074881988 0.155523294124713 0.156288715274401 0.146901351464838 0.145593649132414 0.154996075229981 0.146837068838387 0.150857790452394 0.144426400687031 0.145767570421093 0.148425085458531 0.151696311946400 5 0|5 /|+ 22621775 22622050 22621886.556 22620602 22622458 + gene protein_coding_gene TRUE TRUE AT5G55850.1 NOI NOI protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04410.1); similar to Os09g0253000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062688.1); similar to nitrate-induced NOI protein [Zea mays] (GB:AAB86937.1); contains InterPro domain Nitrate-induced NOI; (InterPro:IPR008700) 0.557753712061178 6.53783640705378 5.04929103985861e-05 0.220048103517038 7.96291529553694 19.3190623694481 0.557753712061178 0.0509946549180214 AT5G03730_at 7.82307015234014 7.86319747054401 8.76372418915967 8.8204455337197 9.23828677081319 8.9873693154683 7.21481738141857 6.82279995110527 7.44272889441098 7.66309606302385 8.89556885566322 8.91232714543288 9.03797096066566 8.67374031604085 8.73672404642829 9.48464055868951 9.23990976662963 9.10719259016151 7.53622626786575 0.139594014746080 0.139647509272635 0.144211409960001 0.147273082993269 0.141909474439514 0.141783537989389 0.154525680780829 0.143049397183790 0.167289526843587 0.136751628726711 0.141188660062813 0.136586397763108 0.136586397763108 0.144680046463706 0.143831113879762 0.138483505193869 0.145691571286481 0.145688446223116 0.147377254255578 5 5|0 -|/ 974977 976078 975431.2 974498 979848 - gene protein_coding_gene TRUE TRUE AT5G03730.1|AT5G03730.2 CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase/ protein threonine/tyrosine kinase|CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. Identical to Serine/threonine-protein kinase CTR1 (EC 2.7.11.1) (CTR1) [Arabidopsis Thaliana] (GB:Q05609); similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G24480.1); similar to ethylene-responsive protein kinase TCTR1 [Lycopersicon esculentum] (GB:AAD46406.1); similar to CTR1-like protein kinase [Lycopersicon esculentum] (GB:AAR89820.1); similar to CTR1-like protein kinase [Rosa hybrid cultivar] (GB:AAK40361.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.613238028634085 6.5362760998522 5.05971828620916e-05 0.220451925730133 7.96131088216797 16.4708936897698 0.613238028634085 0.0814395960670237 AT5G62100_at 2.75029468727031 3.03395420774577 3.33302702700078 3.45841512078641 3.4619409469579 3.57804395742148 4.6407805535045 4.26190038369968 3.89732854216207 4.03439603781553 5.17325073178242 4.42127458082007 5.10380635109327 4.42789903105584 4.24117061717502 3.90147156457253 4.12886860724172 4.5409242749597 4.30537855918662 0.233931425069377 0.243038239061156 0.242045576807626 0.234391267877612 0.231283230570246 0.235686568985448 0.230532153174349 0.235410788452784 0.2316518301529 0.238856296310098 0.238810804966795 0.231739140514472 0.232418651681128 0.234926497536748 0.230387247075348 0.230387247075348 0.236779857062763 0.230387247075348 0.234371427192217 5 0|5 /|+ 24958419 24958914 24958736.889 24957622 24959200 + gene protein_coding_gene TRUE TRUE AT5G62100.1|AT5G62100.2 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)|ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2); protein binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3), protein binding [Arabidopsis thaliana] (TAIR:AT5G07220.1); similar to Ubiquitin; Apoptosis regulator Bcl-2 protein, BAG [Medicago truncatula] (GB:ABE86297.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626)|similar to ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3), protein binding [Arabidopsis thaliana] (TAIR:AT5G07220.1); similar to Ubiquitin; Apoptosis regulator Bcl-2 protein, BAG [Medicago truncatula] (GB:ABE86297.1); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.62449569035762 -6.52438174164938 5.13997029358145e-05 0.223897105988408 7.9490671355204 7.85047841032784 -0.62449569035762 0.0870819235615095 AT5G55740_at 5.80572579315554 5.88087198771939 5.74870052639833 5.82546885187168 7.08899029623664 6.66220780919968 7.01782583039267 7.15939075931906 5.5548198610739 6.57142507793488 7.25522785922491 7.84423588219252 7.45282851744673 7.2016093146141 7.71026121288249 7.6023012556675 6.63884090143247 6.11870090848455 6.52888512640268 0.207590779065850 0.207595528665142 0.210976377367962 0.206749711723519 0.206151205762553 0.213863600504914 0.204719114655773 0.203615610424426 0.207581386735737 0.207682518814017 0.207438616670675 0.205452846287259 0.207700026537857 0.208427488143970 0.206215894191210 0.206245930356488 0.211380398606846 0.213869617417851 0.207190517600154 5 5 - 22579250 22579742 22579509.727 22579167 22581659 - gene protein_coding_gene TRUE TRUE AT5G55740.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G21300.1); similar to OSJNBa0016O02.23 [Oryza sativa (japonica cultivar-group)] (GB:CAE06013.3); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83958.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.608495103646243 -6.51825148999729 5.18186437839152e-05 0.225670193678951 7.94274771643956 13.1218364417684 -0.608495103646243 0.080003724474062 AT5G64570_at 9.82301604923754 10.0231028180046 11.6142770919704 11.7572290441162 11.3126937784786 10.8475048586358 9.65846921314754 9.28907153025646 8.02968297716457 8.8927342957894 8.59065919004217 7.80658332090326 9.7199897902915 9.49825684765067 8.0618861660061 10.1389789931253 10.7589394409523 9.22198787177903 7.48162268781342 0.164830479932350 0.168237579920488 0.169909044224687 0.167443326577015 0.170732797647456 0.180419517364604 0.170918025554464 0.174629585199433 0.178157348826686 0.176378547964442 0.169760257528797 0.184883212446808 0.172103079971452 0.171403988464766 0.173088719347682 0.164512741273574 0.169716218375154 0.166970237395961 0.190077339913644 5 5 - 25827484 25827918 25827774 25827341 25830561 - gene protein_coding_gene TRUE TRUE AT5G64570.1 XYL4 (beta-xylosidase 4); hydrolase, hydrolyzing O-glycosyl compounds Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. similar to BXL1 (BETA-XYLOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G49360.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G19620.1); similar to xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] (GB:CAJ65922.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); similar to LEXYL1 [Solanum lycopersicum] (GB:BAC98298.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.682724488260116 6.51708579729947 5.18987212609774e-05 0.225967032370296 7.94154535215664 19.220340642739 0.682724488260116 0.111257508895334 AT5G55570_at 3.52404206009063 4.19554248656868 4.42895791405265 4.71389050896975 3.88858277707831 4.32394527174268 7.0059241284194 6.5718711386022 4.21910106508393 5.08372834792213 5.42908274016451 5.5761434261137 5.93948781488334 6.52078157623494 4.83545249351413 6.98477784962927 6.01393591157117 5.35960708972704 4.67267477914922 0.283229525278519 0.283750399215953 0.283229525278519 0.284114573903741 0.283229525278519 0.295640126655818 0.284294540342861 0.288938214112635 0.306691003355320 0.292059129349202 0.291794218017189 0.288146693808856 0.283229525278519 0.290692317055867 0.292180974389036 0.298905923907901 0.299750318041719 0.309516693642886 0.292141214224190 5 5 - 22531944 22532455 22532251.375 22531701 22532684 - gene protein_coding_gene TRUE TRUE AT5G55570.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57316.1); similar to Os01g0762300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044326.1); contains domain no description (G3D.3.20.70.20); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938) -0.83839646671927 -6.50759438581493 5.25557030358929e-05 0.228774975315242 7.93174701170147 10.0770495407480 -0.83839646671927 0.165087428861607 AT5G49700_at 1.60980388603846 1.16802648824179 2.62435216027048 2.46932293380595 2.87096301923151 2.32053233491806 1.68820397691746 1.13810918939023 2.25701013854556 1.42455907438154 2.37730127835034 2.40931340330169 2.83471754409859 1.93855129497222 2.72446573311670 2.942948549836 3.24721299348272 2.56949654799788 1.72379984350425 0.247444765744814 0.242792826478565 0.250581961785593 0.256044462223665 0.242903124041129 0.260899734721991 0.250553303988966 0.254418386479623 0.249516608866054 0.242384504049667 0.246397463787304 0.242671519697957 0.250603277908931 0.245263840569808 0.24162926755592 0.242717775588593 0.253405930070966 0.248923124738756 0.253645982825172 5 5 + 20210142 20210610 20210339.636 20209825 20210655 + gene protein_coding_gene TRUE TRUE AT5G49700.1 DNA-binding protein-related similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT1G14490.1); similar to DNA-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33958.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175) 0.812715774475979 6.50010791673169 5.30802051840778e-05 0.231005052961106 7.9240079635136 4.20230955041256 0.812715774475979 0.157163701422795 AT5G33390_at 3.06798121329442 3.31971621450789 3.9013700110302 3.54090629876697 3.49896002704164 3.50058152838433 3.44181018847249 3.43244563234983 3.20226936410552 3.87801316595399 3.17872582470645 3.03318383832816 3.05356748673479 3.432197178756 3.14655647102354 3.38629089175466 3.34314751499656 3.23505676422291 3.63677251800613 0.216160587346526 0.224088438428141 0.216160587346526 0.218244293009622 0.222230080116232 0.227174195293579 0.218383663391971 0.218158226072037 0.216160587346526 0.217572042070903 0.216160587346526 0.222175115084903 0.222603203193583 0.226885888516498 0.22612962938541 0.218099135674918 0.233457905909908 0.226883730648536 0.226326692785306 5 5 + 12679604 12679933 12679817.364 12679019 12680050 + gene protein_coding_gene TRUE TRUE AT5G33390.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT1G36675.1); similar to EBNA-1 [Cercopithecine herpesvirus 15] (GB:YP_067973.1) -0.598440524734234 -6.49691343790344 5.33057188095963e-05 0.231933182540554 7.9207028922554 6.86219260373293 -0.598440524734234 0.0761037123532247 AT5G03700_at 3.66474773136663 3.83281186126789 3.66008693184332 4.0126268721125 5.66581287977475 5.46143990157546 3.14849696298353 3.12295326034992 3.20535171012805 3.05024863812844 5.04829110222540 5.1770517550169 4.24935449909846 5.2483408272664 4.75764219075796 4.16764539213302 4.21376484319883 3.99742598174688 3.31430078501626 0.244394936166690 0.239429567467281 0.251946039268665 0.243094532511918 0.257753171923939 0.251829971065034 0.247559640470025 0.241164683553422 0.246412198968623 0.253341429701873 0.239035402075624 0.239035402075624 0.248346203899792 0.247722471657018 0.243236231591059 0.239035402075624 0.245269313173570 0.248859967677795 0.251662991325903 5 5 - 965924 966437 966264.091 965873 967321 - gene protein_coding_gene TRUE TRUE AT5G03700.1 PAN domain-containing protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to S-receptor kinase-like protein, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92753.1); similar to Os02g0527900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047006.1); contains InterPro domain Apple-like; (InterPro:IPR003609); contains InterPro domain N/apple PAN; (InterPro:IPR003014); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) 0.599013836673765 6.49639756904576 5.33422328535091e-05 0.232038712912765 7.92016900599974 7.96982535933661 0.599013836673765 0.0764092206542064 AT5G27860_at 6.56839190182703 6.03163896049113 7.52534229272444 7.58193162521344 7.89602352815934 7.30270511583429 5.0962001722217 4.59105250050406 5.64339240647104 5.19486783095965 7.4117675450659 7.68886467719905 6.7735023700251 7.68314498699405 7.26194722871256 7.82430474777782 7.1529565421413 6.87581486463076 5.90351328303269 0.372546656623583 0.372546656623583 0.372546656623583 0.378444382762449 0.372546656623583 0.435814532543961 0.398170474039589 0.421999147154239 0.405265815700177 0.381280239056307 0.372546656623583 0.376636083860551 0.375693638678876 0.375248535084024 0.372546656623583 0.372546656623583 0.372546656623583 0.372546656623583 0.395765895289155 5 5|0 -|/ 9876286 9876320 9876301.667 9874828 9876468 - gene protein_coding_gene TRUE TRUE AT5G27860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to vitellogenin, related [Medicago truncatula] (GB:ABE85691.1) 0.832786122649357 6.4896276639652 5.38239147027558e-05 0.234080205042285 7.91315857761188 13.0314752840250 0.832786122649357 0.164037837703053 AT5G12200_at 8.98516450484136 9.21004206062809 10.2024105044192 10.1296968671389 10.1390126137244 10.0915348708043 8.27267216095538 8.18096518060054 7.80918529325228 7.88747065806317 8.89161507857398 9.02256964977368 8.91796354450023 8.94260234754123 8.85846085632534 9.1931621866742 9.31109781244664 9.41409129644893 7.98424521303717 0.172095939356786 0.165415327029199 0.165964908508346 0.168597801650523 0.166454815895352 0.170293543346268 0.172781345650268 0.180442452975463 0.174860761751364 0.1836179784582 0.168671139911298 0.167443848011428 0.168251706688666 0.175990997442920 0.179656848211494 0.164842657847429 0.174628732173254 0.170294492600343 0.180384280103872 5 5|0 -|/ 3941724 3942724 3942088.375 3941529 3944812 - gene protein_coding_gene TRUE TRUE AT5G12200.1 dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) similar to ATALN (ARABIDOPSIS ALLANTOINASE), allantoinase/ hydrolase [Arabidopsis thaliana] (TAIR:AT4G04955.1); similar to putative dihydropyrimidine amidohydrolase [Oryza sativa (japonica cultivar-group)] (GB:BAB44078.1); similar to Metallo-dependent hydrolase, composite [Medicago truncatula] (GB:ABE77689.1); similar to Metallo-dependent hydrolase, composite [Medicago truncatula] (GB:ABE77695.1); contains InterPro domain Metallo-dependent hydrolase, composite; (InterPro:IPR011059); contains InterPro domain Dihydroorotase region; (InterPro:IPR005847); contains InterPro domain Amidohydrolase 1; (InterPro:IPR006680); contains InterPro domain D-hydantoinase; (InterPro:IPR011778) 0.544707135059061 6.48822933332474 5.39239873106274e-05 0.234461496826608 7.91170962257182 17.8827268793822 0.544707135059061 0.0446338455959383 AT5G01920_at 7.98514406486264 8.29283280466347 8.16862972683929 8.07275551919346 8.97395140707409 8.55235152028295 8.46223016316509 8.66834837498998 9.82423390169106 9.81892481600147 10.0573970533358 9.98138881589883 9.74519553251076 10.0227123000380 9.8219084036317 10.1463883973031 9.7251751644814 10.0063115711069 9.77985839331284 0.147505242177658 0.143467920600386 0.151158469686403 0.144706933329339 0.135084482108439 0.145917256966373 0.136087631721114 0.142894113854032 0.135270533565878 0.132512045827234 0.134707413454700 0.135009774589951 0.135226183393900 0.13676318896486 0.133114378623535 0.136033086606214 0.136418209089499 0.133196928223376 0.134376859728415 5 5|0 +|/ 360197 360819 360551.8 359104 362901 + gene protein_coding_gene TRUE TRUE AT5G01920.1 STN8 (state transition 8); kinase Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. similar to STN7 (STT7 HOMOLOG STN7), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G68830.1); similar to Protein kinase [Medicago truncatula] (GB:ABE86991.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.646914247016968 -6.48073314251315 5.4463875028047e-05 0.236754464746920 7.90393652941528 18.2700214601956 -0.646914247016968 0.0985189434237766 AT5G14960_at 2.10699988707237 2.37522235982846 2.76996074785826 2.62344766120653 3.9643736565917 3.41448421105328 1.97211651304229 1.49760246485416 1.18549254199235 1.122593121778 1.69905931289563 1.55094932592603 1.73138799643680 2.01950043225268 1.66486391633395 1.35023664947532 2.28388686898321 1.47133277403733 0.972614878106453 0.20550161459778 0.21369488493077 0.202721025539895 0.205241539574894 0.212719299884039 0.212232093569901 0.203552146389797 0.205715276507475 0.213391588155037 0.211501799100699 0.202674143559520 0.203753664434027 0.211928071222381 0.207530374666528 0.204124132945285 0.210505512700132 0.216378494697745 0.205594224719896 0.205793019077132 5 5|0 +|/ 4845659 4846304 4846009.889 4843951 4846397 + gene protein_coding_gene TRUE TRUE AT5G14960.1 DEL2/E2FD/E2L1 (DP-E2F-LIKE 2); DNA binding / transcription factor similar to DEL3 (DP-E2F-like 3), transcription factor [Arabidopsis thaliana] (TAIR:AT3G01330.1); similar to Transcription factor E2F/dimerisation partner (TDP) [Medicago truncatula] (GB:ABE82375.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.747911675114212 6.47909833992543 5.45823852483052e-05 0.237215046289134 7.90224010366579 3.99801044110582 0.747911675114212 0.136367883660201 AT5G57740_at 4.21236678116688 4.23318489995136 5.37901106204267 5.39395786273329 5.70790613020031 5.94130002907951 4.60348082143307 4.25921755217314 3.44732826567602 3.81713522005347 5.64972047980828 5.06799974472491 5.39848237972494 5.10532831053529 4.57044528691351 5.58423789543177 5.47905828968525 5.46104745967349 3.61270843813056 0.232282037950742 0.231724536340980 0.235890643442237 0.232343656473863 0.230407653476047 0.227567479092408 0.228840974964586 0.236568727381254 0.239658087661427 0.237951695906115 0.235894744410701 0.231931795244222 0.231013263656868 0.232654212162852 0.233826038406434 0.229594400641253 0.246955038772882 0.244346304374026 0.237749939776227 5 5 - 23412051 23412662 23412336.455 23411811 23414876 - gene protein_coding_gene TRUE TRUE AT5G57740.1 XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32); protein binding / zinc ion binding ubiquitin ligase similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07270.1); similar to Os02g0791200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048357.1); similar to pollen ankyrin-like protein [Lilium lon (GB:AAY26120.1); similar to Os08g0258200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061386.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.587335236027713 6.46206090246657 5.58340743471283e-05 0.242599053038272 7.88453409954137 9.42393512006363 0.587335236027713 0.0721135025215615 AT5G50200_at 8.8335863333366 9.11286916438958 8.54426898702226 8.48481371304638 9.11092966876196 8.91832725777832 4.87905779650134 5.50891451896692 6.05469098313856 5.17421489751211 4.06955237396155 3.99600776516844 4.40630513926521 3.81966323234666 3.61515092340182 4.22179307728791 4.74073558587037 3.6484995121054 4.01608917236146 0.226616027622638 0.224271476154258 0.230140337811336 0.223192810913451 0.227104664492749 0.233808955306032 0.234174792211360 0.226498131906915 0.259518072176257 0.229608767831412 0.227092114916508 0.224757350673615 0.223192810913451 0.232011572767116 0.223192810913451 0.225368887934577 0.263214644340935 0.243557065691649 0.236115689226762 5 5 + 20453942 20454703 20454473.727 20453406 20454952 + gene protein_coding_gene TRUE TRUE AT5G50200.1|AT5G50200.2|AT5G50200.3 WR3 (WOUND-RESPONSIVE 3); nitrate transporter|WR3 (WOUND-RESPONSIVE 3) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction. similar to ATNRT3.2 (NITRATE TRANSPORTER 3.2), nitrate transporter [Arabidopsis thaliana] (TAIR:AT4G24720.1); similar to unknown [Capsicum annuum] (GB:AAM12786.1); contains InterPro domain Fibronectin, type III-like fold; (InterPro:IPR008957) -0.711082663425197 -6.45650907667476 5.6248579168233e-05 0.244343827906804 7.87875401780945 12.4972851643987 -0.711082663425197 0.124232158365202 AT5G59750_at 9.20807045598572 9.30726524201811 9.91501189024936 9.84550371831992 10.1594108738872 9.96516322661423 10.6776952922181 10.2231700232440 10.1870612877674 10.1452037641376 10.1146010343854 10.0898028101553 10.0129527765268 10.2111321171331 9.90803403972604 10.2985008294406 10.3238369944838 10.1110457469285 10.1544031274143 0.0750267421399169 0.0733849622110557 0.080375490064399 0.0737089074636124 0.0733568395532424 0.0786882068597273 0.0730376283440602 0.0778472080512476 0.0798932028548448 0.0751177788671153 0.0740759793598004 0.0730376283440602 0.0742315273563498 0.0756889463754791 0.0775512250579065 0.0736111118539959 0.0785280364409052 0.0739289986858759 0.0730376283440602 5 5|0 +|/ 24091831 24092523 24092201.5 24090515 24092768 + gene protein_coding_gene TRUE TRUE AT5G59750.1 riboflavin biosynthesis protein, putative similar to ATGCH (Arabidopsis thaliana GTP cyclohydrolase II), 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II [Arabidopsis thaliana] (TAIR:AT5G64300.1); similar to Os05g0460600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055757.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72560.1); contains InterPro domain GTP cyclohydrolase II; (InterPro:IPR000926); contains InterPro domain 3,4-Dihydroxy-2-butanone 4-phosphate synthase; (InterPro:IPR000422) -0.618641846643198 -6.44025960062014 5.74808791113048e-05 0.249639457980397 7.86180705448991 20.0606418503357 -0.618641846643198 0.0880704343732089 AT5G02270_at 5.71241316956775 5.87372846303847 6.55178062551773 6.64109734756702 6.03249014400437 6.35487173897829 6.78606999983833 7.09641329263216 6.51598798600744 6.40788393168074 6.89773285932754 7.2166853422523 7.34872870716422 7.55698777235235 6.82448222619547 7.28940098057148 6.8745229649907 6.9035321973453 5.87904713126757 0.209745104320648 0.208177586659423 0.219621882561942 0.212502288337591 0.200273832944175 0.212550700357386 0.202321422706820 0.208209816445280 0.225920680250944 0.207370823381326 0.214660274196047 0.207168492109541 0.206564673933597 0.220300427223943 0.217468816719388 0.202565940511353 0.208957521232699 0.198528906200735 0.2009573167522 5 5|0 -|/ 467310 468422 467765.4 467106 469078 - gene protein_coding_gene TRUE TRUE AT5G02270.1 ATNAP9 (Non-intrinsic ABC protein 9) member of NAP subfamily Identical to Non-intrinsic ABC protein 9 (GCN-related protein 3) (NAP9) [Arabidopsis Thaliana] (GB:Q9LZ98); similar to POP1 [Arabidopsis thaliana] (TAIR:AT5G44110.1); similar to Lipid exporter ABCA1 and related proteins, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL50045.1); similar to Os03g0316900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049940.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.60904448142606 -6.43888173117437 5.75866964743919e-05 0.250041436091810 7.86036802356454 13.0719325047731 -0.60904448142606 0.0837561247513237 AT5G37770_at 5.84659981026357 6.42387615609852 6.2225415076112 6.78018577386657 6.72785107393736 6.90366622062145 7.8392580681106 7.87780034273378 7.9245076493163 7.0828223975244 9.15022153014789 8.76561107821168 8.07178382498561 8.93161633531167 8.25341335164836 7.79966215054835 6.8509909877112 8.25138157859563 7.30603561888862 0.21690056064661 0.200816891577497 0.196831381611756 0.208195659533537 0.194002270066969 0.190705207310251 0.200804302659911 0.188530881822752 0.200884868018836 0.199318766072849 0.193760737648516 0.197899681258073 0.194492542569161 0.200324653615154 0.193451860654284 0.188530881822752 0.204951970052985 0.189221291355161 0.190008828926694 5 5 - 15016401 15016752 15016596.364 15016084 15016849 - gene protein_coding_gene TRUE TRUE AT5G37770.1 TCH2 (TOUCH 2); calcium ion binding Encodes a protein with 40% similarity to calmodulin. Binds Ca(2+) and, as a consequence, undergoes conformational changes. CML24 expression occurs in all major organs, and transcript levels are increased from 2- to 15-fold in plants subjected to touch, darkness, heat, cold, hydrogen peroxide, abscisic acid (ABA), and indole-3-acetic acid. However, CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress; in regions undergoing growth; in vascular tissues and various floral organs; and in stomata, trichomes, and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth, are defective in long-day induction of flowering, and have enhanced tolerance to CoCl(2), molybdic acid, ZnSO(4), and MgCl(2). Identical to Calmodulin-related protein 2, touch-induced (TCH2) [Arabidopsis Thaliana] (GB:P25070;GB:O22592); similar to calmodulin-related protein, putative [Arabidopsis thaliana] (TAIR:AT1G66400.1); similar to Os05g0223000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054953.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV59327.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299) -0.76058700410767 -6.4384223000792 5.76220262472607e-05 0.250137215939359 7.85988812884746 14.6762841990995 -0.76058700410767 0.142348541299478 AT5G10695_at 8.47425216582567 8.4529226336389 9.53570258376825 9.29564199119242 9.38055240306224 9.00830650532436 5.76109013224575 5.2827517871717 6.29732983030644 5.19998172134742 6.52786905375532 6.03486996910464 6.38953793141028 6.78924239672548 5.91060488070777 6.86095334666961 7.33150862894421 6.75395311534982 4.9311615583687 0.249319455432938 0.25182268344837 0.249001670874381 0.263817272757985 0.260735850718213 0.258511505821450 0.234100489673385 0.241302075939158 0.248151513744812 0.253147996222165 0.234842817098228 0.235751141184326 0.233231719315698 0.233231719315698 0.256591801255855 0.234691646374647 0.242070105847132 0.234247574031566 0.257328553790966 5 5 + 3377818 3377997 3377902.545 3377664 3378222 + gene protein_coding_gene TRUE TRUE AT5G10695.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57123.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28467.1); contains domain Glucocorticoid receptor-like (DNA-binding domain) (SSF57716) 0.678351539586843 6.435193602211 5.78709669712663e-05 0.251159996655296 7.85651463046568 14.1743900846158 0.678351539586843 0.112878692546691 AT5G63970_at 5.32401480260711 5.44620813674378 6.91007721931373 7.13974718624544 7.29315017945068 6.92192711790655 4.94302214632449 4.97816704740035 3.72065730615235 4.30058226482260 4.8410457409264 5.18367062734875 5.14030925035782 4.97772301115341 4.76563385529544 5.36224689251702 5.72566089953578 5.71248433388603 3.90523210358341 0.258667082410893 0.258667082410893 0.283731718712025 0.270525470256608 0.262864346498220 0.274055782203256 0.258667082410893 0.258667082410893 0.279621564173847 0.264116789589202 0.258667082410893 0.26432328492322 0.274891381183635 0.271067845177348 0.267892763444349 0.260174249956372 0.277802653148254 0.262253111127347 0.260393670432194 5 0|5 /|- 25624226 25625060 25624596.714 25623997 25626473 - gene protein_coding_gene TRUE TRUE AT5G63970.1|AT5G63970.2 copine-related|protein binding / zinc ion binding similar to copine-related [Arabidopsis thaliana] (TAIR:AT3G01650.1); similar to Os01g0960500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045467.1); similar to copine-like protein [Oryza sativa (japonica cultivar-group)] (GB:ABG34341.1); similar to Os12g0288400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066593.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.596356171573906 6.41747755107509 5.9257623215324e-05 0.257118827131291 7.83797316490726 10.7140829217809 0.596356171573906 0.0786820829199072 AT5G26180_at 4.74882222516966 4.41660758957422 4.75818021613837 4.71800887368147 4.44794181320716 4.2072938005799 4.47516590549301 4.05941176105189 3.33631943606977 3.12008394763593 3.30431856315615 3.22937588786584 3.48763947174888 3.02156633039431 3.42974986943478 3.27179956817903 3.41723312148453 3.39957610759205 3.41393326785923 0.247388780225137 0.244067159702271 0.239081596265114 0.240977685702123 0.238305936849197 0.250983336276874 0.238081814362579 0.244390361646806 0.247817985692359 0.238081814362579 0.243378033168432 0.238081814362579 0.238081814362579 0.243032622243433 0.2392106680128 0.244716431806225 0.249188012023051 0.240889616559014 0.238081814362579 5 5 + 9151705 9152536 9152086.2 9149230 9153505 + gene protein_coding_gene TRUE TRUE AT5G26180.1|AT5G26180.2 NOL1/NOP2/sun family protein similar to nucleolar protein, putative [Arabidopsis thaliana] (TAIR:AT5G55920.1); similar to Os02g0217800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046301.1); similar to putative Williams Beuren syndrome critical re (GB:BAD17177.1); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; (InterPro:IPR001678) -0.647063764068706 -6.4146306207864 5.94837620652961e-05 0.258040559839254 7.83498871517987 7.78406381419709 -0.647063764068706 0.101313607435215 AT5G10820_at 2.62415121711014 2.96136243197731 2.81829625513355 2.80258983597876 3.04359259814684 2.93856168087118 1.90322941263726 1.67103636471149 2.00872503043151 2.12621102043956 3.49116316563117 3.43574189323927 3.06764222201371 2.79284715359091 3.06904473506713 3.08973690677954 2.51451003378721 3.28535637302911 1.70606816480714 0.252552805461016 0.251680772501228 0.270232514033311 0.259624896376617 0.254732926883032 0.288939140294983 0.258661904589251 0.263940980462607 0.257419784144881 0.270385819780277 0.251680772501228 0.257413173537995 0.268505034895857 0.255740301784937 0.257962523429102 0.251680772501228 0.260406801090582 0.264664127824934 0.254462139843342 5 5 - 3420961 3421406 3421170.182 3420838 3423222 - gene protein_coding_gene TRUE TRUE AT5G10820.1 integral membrane transporter family protein similar to integral membrane transporter family protein [Arabidopsis thaliana] (TAIR:AT1G79710.1); similar to Biopterin transport-related protein BT1 [Medicago truncatula] (GB:ABE86620.1); contains InterPro domain Biopterin transport-related protein BT1; (InterPro:IPR004324) 0.584856978393934 6.41174074781352 5.97142595030192e-05 0.258980743464594 7.83195786603814 5.11548083237998 0.584856978393934 0.0731968450734337 AT5G48480_at 6.8149631872017 7.61848140935568 7.92519510815579 8.19215989094838 8.93290800050714 8.67446313894648 6.91211021943459 7.37912526211574 3.98048425063352 4.90261738267448 6.91515515095549 7.24558275655763 6.97153467795896 7.33713800499733 7.06837850928825 6.97614333083761 7.64970259877976 6.84142046075113 4.90291809440641 0.223883492371864 0.214842086210239 0.22443832529305 0.215376055171491 0.225469377693978 0.221192361655504 0.220504317350289 0.216359903392435 0.252261438677838 0.227052507504895 0.222913459533727 0.217707301330684 0.216395365675515 0.225820099187332 0.217088417354091 0.218031253883667 0.218025754496880 0.224303406745664 0.248644066733638 5 5 + 19662062 19662848 19662435.545 19661901 19663115 + gene protein_coding_gene TRUE TRUE AT5G48480.1 Identical to Protein At5g48480 [Arabidopsis Thaliana] (GB:Q9LV66); similar to early tobacco anther 1 [Medicago truncatula] (GB:ABE79314.1); contains domain no description (G3D.3.10.180.10); contains domain Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (SSF54593) 0.850320943447114 6.40280443617392 6.04331089196089e-05 0.262037960275424 7.8225767987088 13.6666616998351 0.850320943447114 0.173211079977367 AT5G14740_at 12.7024328083467 12.9237843121041 12.4986439446909 12.6630231861068 12.9220906255153 12.9356027875384 13.3853249224414 13.6856683408526 13.7746854685953 13.8584166745047 13.9445669638413 14.0963765958495 13.8692213794547 13.8171368196360 13.9127661005472 13.9451639273146 13.5818192411194 13.9657544976451 13.8193175909144 0.069425037695484 0.0699642000960051 0.0732489538003556 0.0705484330630523 0.0676706448443495 0.0690941364660021 0.0693553467080369 0.0722427710969463 0.0792902411165016 0.0676706448443495 0.0711010380254978 0.0676706448443495 0.0695306785149886 0.0711669926738825 0.0729497026030986 0.0695054274267839 0.0750424258210739 0.0676706448443495 0.0695748490116977 5 0|5 /|+ 4761012 4762317 4761405.222 4757975 4762618 + gene protein_coding_gene TRUE TRUE AT5G14740.1|AT5G14740.2|AT5G14740.3|AT5G14740.4|AT5G14740.5 CA2 (BETA CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding|CA2 (BETA CARBONIC ANHYDRASE 2) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. Identical to Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) (CA2) [Arabidopsis Thaliana] (GB:P42737;GB:Q42116;GB:Q9FDZ0;GB:Q9LER2); similar to CA1 (CARBONIC ANHYDRASE 1), carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01500.4); similar to carbonic anhydrase (GB:AAA50156.1); contains InterPro domain Carbonic anhydrase, prokaryotic and plant; (InterPro:IPR001765) -0.578836699300755 -6.40039389054181 6.06286030900206e-05 0.262824994395239 7.82004399822632 26.8191083336232 -0.578836699300755 0.0705939526777039 AT5G52300_at 4.41861665572235 3.77963431729279 4.55053443971096 4.10697285677579 4.38739476521460 4.46389084339272 4.27604663314125 4.45617845165275 4.71581730113275 4.52688487131642 4.56453858964046 4.352961602629 4.6531203820311 4.53840726241503 4.59890067935187 4.50780184431978 4.78038166890239 4.80015779977825 4.44276393572175 0.181895265335398 0.180313212031427 0.187432781333773 0.187220805797003 0.189856290005156 0.182835823993847 0.186517597387355 0.181753581338224 0.188014707951654 0.199989566130098 0.184003536472454 0.179048700109375 0.184652755814045 0.188527788033414 0.180099088288851 0.185996827423129 0.184572715701838 0.192230630833026 0.191446150624776 5 5|0 +|/ 21255951 21256587 21256282.5 21254282 21256755 + gene protein_coding_gene TRUE TRUE AT5G52300.1|AT5G52300.2 RD29B (RESPONSIVE TO DESSICATION 29B) encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. Identical to Low-temperature-induced 65 kDa protein (Desiccation-responsive protein 29B) (LTI65) [Arabidopsis Thaliana] (GB:Q04980;GB:Q06737;GB:Q42275;GB:Q8RXF6;GB:Q9FHC9); similar to stress-responsive protein-related [Arabidopsis thaliana] (TAIR:AT4G25580.1); similar to stress responsive protein [Brassica oleracea var. acephala] (GB:AAR21079.1); contains InterPro domain CAP160; (InterPro:IPR012418) -0.744697695666075 -6.39074712843342 6.14177703627295e-05 0.266184616752070 7.8098982675478 8.88558650270813 -0.744697695666075 0.138804990323131 AT5G63820_at 4.01264714069230 4.09930318398639 3.87464249336437 3.53417631151453 4.08872824233104 3.86059376772471 3.52085322042904 3.53453896789409 3.86504229236794 3.72021092112359 3.79189763656579 3.71161695338678 4.22739214234956 4.36569725892908 3.44470080020564 3.75207949285496 4.24692649095171 4.52163631813394 3.82026249141503 0.202107252829501 0.200605404856382 0.204373057531570 0.202457107368785 0.212805158497753 0.209295483269272 0.214375650564286 0.208438173742653 0.205374960299031 0.20418393179709 0.207979853544495 0.200040456781241 0.209436815174803 0.201429887247220 0.200885858500024 0.21110438803251 0.215920469661237 0.203413841164251 0.204986610320253 5 5|0 +|/ 25559068 25559772 25559367.5 25558802 25560119 + gene protein_coding_gene TRUE TRUE AT5G63820.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28920.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana; (InterPro:IPR006462) -0.581160022781252 -6.38531983383351 6.18665974061937e-05 0.268067966561037 7.80418341289009 7.72047639347924 -0.581160022781252 0.072530165843889 AT5G03660_at 8.43910865567016 8.4711911588084 9.4586992131291 9.49232199020849 9.87590892792232 9.55079781319628 8.41617531167912 8.50557279919297 7.9263788177901 8.00912903012776 9.7607187216121 9.66435876631402 9.16613107772894 9.61640953241498 9.28817606350721 9.68295865626314 9.51329169553009 9.30539002177082 7.8845139865241 0.169114892954055 0.163318790605962 0.166119845998083 0.167362176426812 0.163318790605962 0.171430394570898 0.168571059523052 0.165792616190234 0.182892379513979 0.179525383942217 0.172564577124393 0.167050615807387 0.164302281991986 0.167367415143748 0.170924562715166 0.165693298397236 0.168199888675947 0.169472895195813 0.172328396987839 5 5|0 +|/ 938100 939785 938422.778 937976 940057 + gene protein_coding_gene TRUE TRUE AT5G03660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09980.1); similar to Os04g0408600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052720.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79606.1); similar to OSJNBa0042I15.15 [Oryza sativa (japonica cultivar-group)] (GB:CAE04893.2); contains InterPro domain Protein of unknown function DUF662; (InterPro:IPR007033) 0.556656464689838 6.38252093569357 6.20994354400087e-05 0.269014754326118 7.80123429180846 17.7460652812458 0.556656464689838 0.0589019013014822 AT5G42200_at 2.06864559793656 2.60883985226896 3.69790204580856 3.6236278796611 5.26233373441361 4.8425510275182 2.80407264009018 3.18194638959277 3.16668683122603 2.19327958707698 3.66381490983018 3.68632900610869 3.46167190179512 3.82529639227558 2.89820317573651 3.26767080548717 2.58168628794656 3.47899646466796 2.33094369267211 0.261870121533162 0.268553701803537 0.264197174421341 0.275522413624069 0.271987564763543 0.261185424107675 0.264243608476926 0.263684886562920 0.274059048798728 0.264578515809513 0.261185424107675 0.261185424107675 0.263403709736974 0.272697119353836 0.265081303258682 0.264363571992895 0.284484389125525 0.264909642355364 0.261185424107675 5 5 + 16877777 16878154 16877949.364 16877695 16878423 + gene protein_coding_gene TRUE TRUE AT5G42200.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5J (ATL5J) [Arabidopsis Thaliana] (GB:Q8L9W3;GB:Q9FHW6); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G20823.1); similar to Os06g0192800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057038.1); similar to putative Avr9/Cf-9 rapidly elicited protein [Oryza sativa (japonica cultivar-group)] (GB:BAD35269.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.735014769234029 6.37990412464925 6.23179764813907e-05 0.269899156140903 7.79847584488097 6.47203755673091 0.735014769234029 0.135859768207075 AT5G64670_at 5.94874752047182 6.31262790968152 6.54417006301277 6.47595329830917 6.36195621247188 6.21493656347164 6.52636454965753 6.75832213853113 5.51296267947576 5.92163167419571 6.53280692893095 7.15093236374659 6.53593975666892 6.08501696856848 7.169678294111 6.65413464410863 6.35493637723675 6.41793285774092 5.74738083015403 0.168961815066833 0.168961815066833 0.171296347671960 0.172179451368097 0.175887682874312 0.175457422476868 0.174646119199583 0.171654458905034 0.191731397866861 0.168961815066833 0.183263275714450 0.172068725398784 0.174269348540545 0.178436674584054 0.171743036245815 0.168961815066833 0.183733683084376 0.170210480979965 0.177183149454614 5 5|0 -|/ 25869768 25870752 25869998.333 25869493 25871215 - gene protein_coding_gene TRUE TRUE AT5G64670.1 ribosomal protein L15 family protein similar to RPL15 (ribosomal protein L15) [Arabidopsis thaliana] (TAIR:AT3G25920.1); similar to Os08g0310100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061512.1); similar to Mitochondrial/chloroplast ribosomal protein L15/L10 (ISS) [Ostreococcus tauri] (GB:CAL57979.1); contains InterPro domain Ribosomal protein L15, bacterial form; (InterPro:IPR005749); contains InterPro domain Ribosomal protein L15; (InterPro:IPR001196) -0.594968088738575 -6.3784997872285 6.2435598836945e-05 0.270346142963972 7.79699502448555 12.5628834495330 -0.594968088738575 0.0797707979013443 AT5G05230_at 6.01667622780342 6.02905260592444 7.32686591004219 7.26880823409128 8.03286615100266 7.87075235410433 5.21353585395992 5.53285323110928 4.16747377649927 4.21200616717526 5.35965828972484 5.66949578688942 5.81533848225742 5.78219918371271 5.04718127835854 5.91786050707351 5.81614507073987 5.46748474499742 4.7643520716777 0.216153110245086 0.211329999065092 0.217799882242191 0.220557831227624 0.211329999065092 0.234395205005636 0.211908022035144 0.211329999065092 0.214444680335937 0.21587447240014 0.214243303502577 0.217104591470911 0.211941522213733 0.218221787677306 0.214614634972725 0.212969783488782 0.24307264242548 0.218562424133317 0.220588386262522 5 5|0 +|/ 1551778 1552854 1552286.8 1551389 1553806 + gene protein_coding_gene TRUE TRUE AT5G05230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40640.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO60024.1); contains domain RING/U-box (SSF57850); contains domain no description (G3D.3.30.40.10) 0.56243671498682 6.37372797318575 6.28370523978643e-05 0.272021599830354 7.79196086038737 11.6567751992147 0.56243671498682 0.0628186853943592 AT5G47550_at 7.79230811671783 7.93481868146444 7.46270641953803 7.75084132119376 7.98854622816185 8.19638297502775 8.11235613629638 8.38684408150577 6.90763860841918 7.22229151903077 8.29640939102484 8.90712811404674 7.96194914830395 7.96390008028503 8.76612485588407 7.18424143058565 7.82562191459615 8.6182115887191 7.77403688688799 0.160472693775830 0.158943516702993 0.156630662998182 0.159430707675120 0.156721272408861 0.159889417769025 0.154750916600579 0.154750916600579 0.182441866779516 0.166897258384530 0.155987529959951 0.157250935055970 0.165102997047846 0.169965196926806 0.162109031656393 0.174088213513885 0.158276081241537 0.160875252215079 0.163062575390723 5 5 - 19303822 19304164 19303974.545 19303676 19304221 - gene protein_coding_gene TRUE TRUE AT5G47550.1 cysteine protease inhibitor, putative / cystatin, putative similar to cysteine protease inhibitor family protein / cystatin family protein [Arabidopsis thaliana] (TAIR:AT4G16500.1); similar to cystatin domain containing protein [Brassica oleracea] (GB:ABD64972.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) -0.597942297230668 -6.37158127402678 6.30185570558838e-05 0.272744314937865 7.78969489367632 15.6989858217599 -0.597942297230668 0.0815142078033281 AT5G65870_at 6.29958981112138 6.68322081587815 7.17297547069057 7.80084382475657 6.90696586608408 7.026914827196 6.32880595763577 6.99707598874939 3.32241896991526 6.49027789426546 7.32859390226551 7.77772184244043 7.74681318544757 7.94854324016215 6.69492424917866 8.82877410490857 7.49617575352911 7.56407320309966 3.80439149578438 0.218040546986876 0.204604140839774 0.211766042357102 0.203845518915964 0.203845518915964 0.226226498811323 0.205014212450230 0.203845518915964 0.230067850938488 0.210655758083354 0.221716507984496 0.209524785731107 0.207671625380356 0.221762795964960 0.217103041373039 0.220974138756534 0.228212082485739 0.208658812910746 0.235618783253359 5 5|0 +|/ 26368822 26369253 26369087.5 26368734 26369493 + gene protein_coding_gene TRUE TRUE AT5G65870.1 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR); growth factor Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor. Identical to Phytosulfokines 5 precursor (AtPSK5) [Contains: Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)] (PSK5) [Arabidopsis Thaliana] (GB:Q9FEB4;GB:Q7PCB7); similar to ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR), growth factor [Arabidopsis thaliana] (TAIR:AT3G49780.1); similar to TPA: TPA_exp: putative phytosulfokine peptide precursor [Mesembryanthemum crystallinum] (GB:DAA00288.1); contains InterPro domain Phytosulfokine; (InterPro:IPR009438) 0.845650371473843 6.36650068380933 6.34503688510368e-05 0.274549746018436 7.78432895626876 13.0081650144893 0.845650371473843 0.173259094161071 AT5G63530_at 7.21046284064573 7.25437830415635 8.3349018802479 8.08196880670815 8.70763371982835 8.23568803029199 8.28020422304676 8.20844829841682 9.04321264337085 9.0520093379193 8.89707744983564 8.96015514255477 8.77207485199564 8.65902342996034 8.80548730996625 9.27496897413509 8.58529922147064 8.67614656157084 8.87256195739805 0.172568639088617 0.167628982226782 0.166838309099827 0.160249349439749 0.156255545820625 0.156254310235908 0.163518376694501 0.153633695579946 0.159358084592638 0.153260750104313 0.151226046900629 0.158778856286192 0.15649388272762 0.172241904243232 0.160822206882463 0.160128720498399 0.168231191453279 0.159117819817634 0.154876773098133 5 0|5 /|+ 25451990 25452804 25452500.3 25450380 25453060 + gene protein_coding_gene TRUE TRUE AT5G63530.1|AT5G63530.2 ATFP3 (Arabidopsis thaliana farnesylated protein 3); metal ion binding|ATFP3 (Arabidopsis thaliana farnesylated protein 3) Farnesylated protein that binds metals. similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT5G50740.1); similar to OSIGBa0096P03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66434.1); similar to PPAK motif; Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84491.1); similar to Os04g0390100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052639.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.624321303592137 -6.36495974970257 6.35819632339122e-05 0.275055572949904 7.78270062160665 16.9482309782089 -0.624321303592137 0.0937990368073148 AT5G24655_at 4.57040194009614 4.2996623430729 4.53302339941404 4.58562585185863 4.06997561310258 4.09519695285038 4.25708419846772 4.06120009079277 4.41738540392943 4.18803915683945 4.87694945590011 4.46668039125043 4.72088619231109 5.22419733329907 4.36078941751795 4.50565278713449 5.08532196536723 4.61270561792672 4.02789044664617 0.202459554236538 0.206082175588691 0.206742575883079 0.213924151442855 0.200172722277448 0.208919564422042 0.200172722277448 0.206006880323656 0.207614648890363 0.203498804605494 0.200172722277448 0.202534107861995 0.212064891003509 0.206805302665136 0.204323183936632 0.201349757953159 0.202635081712748 0.207717110134987 0.201890158146923 5 5 - 8440888 8441091 8440989.182 8440697 8441221 - gene protein_coding_gene TRUE TRUE AT5G24655.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24660.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) -0.553541910069316 -6.3504750339748 6.48333555900714e-05 0.280404262927059 7.76737487223757 8.78039774748693 -0.553541910069316 0.0587044801647858 AT5G03230_at 7.5307180640875 7.57349073255789 9.37372867014898 9.69377115382517 10.2177712878793 10.0767317528342 8.77531148579587 9.05891860205041 8.02369691216951 8.0874385464667 9.37730580689543 8.59064859619338 9.74274455874838 9.4125870661158 8.43136395566583 9.11144353482359 9.93430247864163 9.1116239182034 8.03395863659195 0.192138873588899 0.179802871199537 0.175694264251155 0.167665989002509 0.171649207923341 0.17103455743728 0.174831626302804 0.171132199049961 0.188108195905342 0.179267550454531 0.167665989002509 0.170338284593489 0.168202352220525 0.170657438507451 0.170680785407738 0.167665989002509 0.170921214827045 0.167665989002509 0.174854740383458 5 5 + 769683 770033 769883 769513 770384 + gene protein_coding_gene TRUE TRUE AT5G03230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60680.1); similar to Protein of unknown function DUF584 [Medicago truncatula] (GB:ABD32800.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 0.589116480302026 6.34847974587456 6.50077967783258e-05 0.281093713269481 7.76526097051383 17.6687388125576 0.589116480302026 0.078273877358388 AT5G49100_at 6.63162057606307 6.8926325889983 6.65548343528746 6.52352522338214 8.15036828499547 8.06270982890004 7.82007740335263 7.43935801790234 7.87818901306246 8.07395492460978 9.05154509500101 9.09095750099982 8.72330879510483 8.65539159805364 9.1265324088836 8.97395967992767 8.28526489699099 8.48666594521628 8.9272925123292 0.199587808870323 0.178030794958996 0.190714437383161 0.192131106260239 0.174014638248121 0.171832826013952 0.175054663118141 0.168582772243907 0.18317331040834 0.172478069225021 0.171045717420459 0.177488445873202 0.172100701922711 0.175569095489356 0.173645245451367 0.169960973582895 0.1683793674973 0.175134385074411 0.173120668736428 5 5 - 19914932 19915419 19915114 19914596 19916340 - gene protein_coding_gene TRUE TRUE AT5G49100.1 similar to OJ000315_02.19 [Oryza sativa (japonica cultivar-group)] (GB:CAE05374.1); similar to Os02g0526700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047000.1); similar to OSJNBa0042I15.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE04879.1) -0.601573769422125 -6.34415115210733 6.53879643495923e-05 0.282672169883287 7.76067275592961 15.8181462815382 -0.601573769422125 0.0844555511120364 AT5G35620_at 7.55140603722877 7.27939588750836 7.73717598096892 7.91082058812003 7.8839217315445 7.76642002348373 7.49136930127233 7.62032152845779 7.73828869080188 7.27390053471879 8.08510304314944 8.11136859811573 7.76703058479388 7.852228545978 8.1985612864654 7.74177953056545 7.47122185694887 7.92556607357136 7.27688029901828 0.125154917866867 0.125553207334529 0.137796255120922 0.125679969372071 0.128967244176404 0.134035764735929 0.128155380722410 0.128511056451206 0.128580405888991 0.12657909696634 0.125439866629364 0.125099776145048 0.126087871719557 0.12432315713994 0.122558597199104 0.125533832466780 0.145813716140747 0.127921851146139 0.137374878148855 5 5|0 -|/ 13842178 13843532 13843103.1 13841935 13843621 - gene protein_coding_gene TRUE TRUE AT5G35620.1|AT5G35620.2 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES); RNA binding / translation initiation factor Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. Identical to Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) (EIF4E2) [Arabidopsis Thaliana] (GB:O04663;GB:Q9SAN8); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to eukaryotic initiation factor 4E [Capsicum annuum] (GB:AAY62607.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040)|Identical to Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (eIF4Eiso protein) (eIF(iso)4E) (EIF4E2) [Arabidopsis Thaliana] (GB:O04663;GB:Q9SAN8); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to eukaryotic initiation factor iso4E [Nicotiana tabacum] (GB:AAU06579.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) -0.56045258114672 -6.33831327262154 6.59044700149015e-05 0.284839119404404 7.7544797436559 15.3170025255538 -0.56045258114672 0.0634847205929153 AT5G07530_at 4.96724751982382 4.50665756609681 5.05902972248938 5.18679509659825 4.15919522165168 4.87043203813573 4.50657014789577 4.35741921722549 4.99628133720393 4.69858308482164 4.75237125350513 4.61772139365940 4.60269828676086 4.89683583663694 4.79741469481269 4.75087659499262 5.44435816619143 4.80364680443809 4.78167574197854 0.169365604128642 0.170420143319054 0.172227982059798 0.166183259873922 0.171126193291603 0.174337905530900 0.169765533131462 0.172889064064888 0.184656731657519 0.164725784900881 0.168424736454970 0.169044329561361 0.165251963406209 0.173064020103011 0.167178545964419 0.164760677465257 0.164725784900881 0.168947068341923 0.164725784900881 5 5 - 2382683 2383130 2382923.545 2382469 2384522 - gene protein_coding_gene TRUE TRUE AT5G07530.1 GRP17 (Glycine rich protein 17) encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat. similar to GRP16 (Glycine rich protein 16), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G07540.1); similar to hypothetical protein [Phaseolus vulgaris] (GB:ABH05945.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.771630337421688 -6.32982637068554 6.66631690847874e-05 0.288051553615366 7.74546633829205 9.53104519967762 -0.771630337421688 0.15052482330654 AT5G27210_at 3.29979361626437 3.79243588983174 4.22857492449531 4.58864594225825 5.57475133387892 5.2832165074793 2.49949271500402 3.20291309336991 3.0016203173958 2.29273163875901 3.87697043620218 4.32607858962191 3.93445351066638 4.03141856819086 4.05201274478553 3.88770664980732 3.61516121387875 3.82393096004642 2.78617272421664 0.233930067923151 0.236103972727411 0.238339327426326 0.237736352812145 0.245297887292375 0.256369532904789 0.239058368113527 0.234629898304393 0.250225538728023 0.234016946239476 0.237307974344098 0.237548682477635 0.235067158270803 0.238123004224021 0.241010369758656 0.237713854139877 0.249111165689186 0.253141886092691 0.240521441401943 5 5|0 -|/ 9572345 9573199 9572742 9572103 9574138 - gene protein_coding_gene TRUE TRUE AT5G27210.1 similar to transmembrane protein, putative [Arabidopsis thaliana] (TAIR:AT3G05010.1); similar to putative expressed protein [Sorghum bicolor] (GB:AAM47585.1); similar to Os03g0756400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051317.1) 0.826607387514409 6.3259057174912 6.70168207071343e-05 0.289512665454820 7.74129836517745 7.37721540829293 0.826607387514409 0.168862723225198 AT5G62470_at 4.33962331992331 5.54421816520054 7.61718974139715 7.51738026160319 8.76792913196122 8.71042424699978 6.70472074194457 6.74816043582212 6.93605081170345 6.5330759541604 8.72533869318146 8.35650760816834 8.58007221520388 8.58292619006422 8.01743091108041 7.75571514371514 8.12241129537112 8.45374481051782 6.64765006093438 0.223251082261630 0.206961679098536 0.199202471201879 0.195180184629813 0.199231886671027 0.196958133121109 0.197727208644575 0.193299727526639 0.204285907565707 0.192480349162452 0.201887246665368 0.196960583774903 0.201856979374199 0.190787127203282 0.195967549546752 0.193983375411332 0.203882508605559 0.195889621247547 0.193927029255734 5 5 - 25096735 25097158 25096969.273 25096217 25098327 - gene protein_coding_gene TRUE TRUE AT5G62470.1|AT5G62470.2 MYB96 (myb domain protein 96); DNA binding / transcription factor Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. similar to MYB94 (myb domain protein 94), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47600.1); similar to MYB60-like protein [Vitis vinifera] (GB:ABK59040.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.957137488239801 6.32567414897946 6.70377715484912e-05 0.289536135317933 7.74105210807029 14.5086360726126 0.957137488239801 0.209546581819905 AT5G26270_at 2.18534689382568 2.59313590795191 2.68587875471019 2.40429555327994 1.99453055827753 2.1807879549789 2.06937357048745 2.53446301983829 2.72456002956823 3.07985598845815 2.01301444547743 2.53333832867157 2.53786598815371 2.39980870792782 2.24117352497059 2.22710453474871 2.56785575121931 2.64696664824374 3.67042574632413 0.217355723089349 0.21373779785557 0.220680031856141 0.212910994892335 0.209879458409065 0.210745574135901 0.214650575255039 0.228972028846529 0.209879458409065 0.222649795577760 0.213702591594300 0.20991799086606 0.212398742701545 0.213693983987709 0.212998125492746 0.210867613158589 0.223268991436676 0.228036847245669 0.216600972074351 5 5 + 9206853 9207483 9207174.273 9206511 9207515 + gene protein_coding_gene TRUE TRUE AT5G26270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26762.1) -0.688513420412055 -6.3070712765066 6.87440117256745e-05 0.296836642631462 7.72123971663117 5.10806231631546 -0.688513420412055 0.121949031154025 AT5G45350_at 11.4708292468086 11.4581532974101 12.8086979669751 12.9017837312352 12.6672868326981 12.5080922370143 11.9185954672521 11.9594879567055 11.2638409501681 11.3639462981396 12.0606235975626 11.9327914287694 12.4796128986559 12.1964050666688 11.7345973181309 12.4433761171943 12.6389419948341 12.2487181136617 10.9565522737895 0.0749563584115388 0.0717821073736222 0.0805470894573459 0.0769144946973837 0.0749179779581314 0.0816829066078317 0.0743210377753935 0.0725273794843162 0.0829456003446589 0.0730296727813598 0.0729393382112871 0.0715560118364967 0.0728519034776853 0.0745491669557919 0.072517729729773 0.0717726624687105 0.0730115744721061 0.0736404334504882 0.0792389851577382 5 5|0 -|/ 18399413 18400018 18399596 18399064 18400926 - gene protein_coding_gene TRUE TRUE AT5G45350.1|AT5G45350.2 proline-rich family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT4G19200.1); similar to Os05g0119300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054483.1); similar to putative glycine and proline-rich protein [Sporobolus stapfianus] (GB:CAB61840.1); contains InterPro domain XYPPX repeat; (InterPro:IPR006031) 0.516225053980691 6.30632857359352 6.88130916166688e-05 0.297066116509159 7.72044751328153 23.9174474208292 0.516225053980691 0.0327621110391699 AT5G46410_at 5.22097057233251 5.62392476002734 7.42482141470283 7.34054357357087 8.3085867774041 6.86739968384633 4.80172610156187 4.44228187715013 3.90598619894427 3.86853809727308 5.40550425952153 5.47707265474243 5.73568008510388 6.07454999313454 4.80540004760215 6.68427076232918 6.04518922406862 5.45494258149176 3.94060083786715 0.247114931974384 0.245393096079853 0.250426131807417 0.245540709640902 0.259795622336661 0.254949341174944 0.24043640854645 0.245895146104616 0.270859973074294 0.257436022343754 0.245516326413746 0.239324009539890 0.239324009539890 0.252114867754310 0.260632384207040 0.239324009539890 0.266257413624054 0.239324009539890 0.260756722363803 5 5 + 18844178 18845339 18844706.9 18842330 18846448 + gene protein_coding_gene TRUE TRUE AT5G46410.1 NLI interacting factor (NIF) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18140.2); similar to CTD-phosphatase-like protein [Hordeum vulgare subsp. vulgare] (GB:AAQ92971.1); contains InterPro domain Dullard-like phosphatase domain; (InterPro:IPR011948); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 1.14757578815415 6.29894250409307 6.9504146896163e-05 0.299979898003839 7.7125641021117 11.0614658012549 1.14757578815415 0.266734179481223 AT5G39610_at 9.49923214436649 9.96756193360553 10.5321441714881 10.8094141941010 11.4022268660821 10.8511338986458 8.6890824450956 8.78360574123927 9.08508824206582 9.14796023824691 10.2217134520655 8.73998528502448 11.0473854238706 10.7969537495601 7.83190061244395 10.8291512879303 10.9210068425986 10.6177264399108 8.69094431571384 0.154173700983532 0.142051459547024 0.151471807835068 0.143674944741715 0.144951781653031 0.150322427028847 0.161181162304714 0.146655684853025 0.157753200002115 0.147347744155542 0.143216825588302 0.150571645641992 0.143234422318767 0.145798591822509 0.164513394412124 0.142051459547024 0.149814404411070 0.149067153128394 0.149746073247838 5 5 - 15875850 15876474 15876071.818 15875628 15877016 - gene protein_coding_gene TRUE TRUE AT5G39610.1 ANAC092/ATNAC2/ATNAC6 (Arabidopsis NAC domain containing protein 92); protein heterodimerization/ protein homodimerization/ transcription factor Encodes a transcription factor. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. similar to ANAC059/ATNAC3 (Arabidopsis NAC domain containing protein 59), protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT3G29035.1); similar to nam-like protein 14 [Petunia x hybrida] (GB:AAM34777.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.723140023459843 6.29696032570929 6.9690867576647e-05 0.300716093593232 7.71044688577413 19.6169962503368 0.723140023459843 0.135032500387647 AT5G62140_at 6.61642691814499 6.329688242247 7.80080059337453 7.8905273917583 8.07080470612259 7.37041015038156 9.46437024729157 9.45189532716229 8.43843130114909 8.72654347943173 9.1172937804341 8.99021912055176 9.28747901980104 9.3641652669753 8.57383745867369 9.3976693739222 8.86130431025066 8.99688705638606 8.62195784144533 0.204476952823586 0.193557315232956 0.196978611288448 0.196747694426522 0.185688486109330 0.198100806207994 0.184265999645831 0.182256307829753 0.196784859042897 0.184538426449278 0.179640380405320 0.178991290877857 0.181023047468383 0.193128274723310 0.187611680845053 0.185523747354199 0.188630291241294 0.192588101954999 0.184273071095050 5 5 - 24971814 24972431 24972156.182 24971732 24972611 - gene protein_coding_gene TRUE TRUE AT5G62140.1 similar to Os02g0677600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047728.1); similar to hypothetical protein PMN2A_1395 [Prochlorococcus marinus str. NATL2A] (GB:YP_292586.1) -0.713417764667782 -6.28798150181397 7.05434338495942e-05 0.304324373627149 7.70084805569205 16.7089910124186 -0.713417764667782 0.131905589120198 AT5G61660_at 10.9758148617202 11.0780992066281 10.4949645729835 10.5124833441407 10.5781122580082 10.3379951671167 10.7877968969462 11.0318797117767 10.7407775866349 10.4788035609300 11.2609905147236 11.3434155902315 11.1110327363399 11.3418344691163 11.4971910449811 10.8437463480641 10.7201120089702 11.1210315674316 10.5175025396887 0.0800805717960068 0.0799221254692617 0.0859414306283042 0.0831031329985724 0.081788375615019 0.0815764870961794 0.079550589247509 0.0808820724431103 0.0847995830939159 0.0843979158116496 0.079550589247509 0.079550589247509 0.079550589247509 0.0800067474097455 0.079898715513607 0.079550589247509 0.0868130127826048 0.0829235708058764 0.0801074996139032 5 5 - 24796702 24797062 24796885.636 24796441 24797156 - gene protein_coding_gene TRUE TRUE AT5G61660.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G46730.1); similar to hypothetical protein MtrDRAFT_AC152818g3v1 [Medicago truncatula] (GB:ABE77867.1) -0.55256550202999 -6.27908142871516 7.13995703098801e-05 0.307946346746513 7.69131996177771 21.5916168427818 -0.55256550202999 0.0619143135309477 AT5G11920_at 7.4969009329116 7.9446249860118 9.48208127007804 9.47805066110883 7.0603449965529 7.22839701040865 2.25413756363481 2.45583438992830 3.06702389565058 2.40123284371542 1.70739617384020 2.11169865255303 2.35503839615648 2.25224431739438 1.51572526791066 2.60473481568987 2.89288636473780 2.16930332213953 2.20892038397459 0.332655339010986 0.318157045060297 0.321210987448776 0.332586683862413 0.337854901417412 0.329465627616379 0.30837792568874 0.301184754925321 0.319170080275156 0.300450720411098 0.306765523620114 0.301760988198666 0.312175150228229 0.312098724770894 0.313176634652571 0.300450720411098 0.303168936676778 0.301144764330888 0.311746205719944 5 5|0 +|/ 3841019 3842145 3841632.3 3839392 3842372 + gene protein_coding_gene TRUE TRUE AT5G11920.1|AT5G11920.2 ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase|ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE) Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. similar to ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5), hydrolase, hydrolyzing O-glycosyl compounds / levanase [Arabidopsis thaliana] (TAIR:AT1G55120.1); similar to Glycoside hydrolase, family 32 [Medicago truncatula] (GB:ABE86259.1); contains InterPro domain Glycosyl hydrolase family 32, C-terminal; (InterPro:IPR013189); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl hydrolases family 32, N terminal; (InterPro:IPR013148); contains InterPro domain Sialidase; (InterPro:IPR011040)|similar to ATBFRUCT1/ATCWINV1 (ARABIDOPSIS THALIANA CELL WALL INVERTASE 1), beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G13790.1); similar to Glycoside hydrolase, family 32 [Medicago truncatula] (GB:ABE86259.1); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl hydrolases family 32, N terminal; (InterPro:IPR013148); contains InterPro domain Sialidase; (InterPro:IPR011040) 0.606610545778572 6.27510090565344 7.1786074029398e-05 0.309541551214764 7.68705422096957 9.0551402037875 0.606610545778572 0.0898212326167487 AT5G44260_at 6.41989367628603 6.57058586208295 5.73478853095177 6.34721934780776 8.06878029130901 8.0351633551917 3.55282796941842 4.12902887053241 5.87748652450282 3.3735441363116 6.20890187303518 6.09785927612632 6.56655293235712 6.03652343096574 7.12926520507682 5.68876432487898 5.94215264885684 5.69535573201992 4.32595807325438 0.223341051831448 0.224220232188008 0.230993767207821 0.226114762914834 0.229727691826350 0.244581634461735 0.240958738756697 0.243517538881362 0.23272940958104 0.242851530287251 0.223220196216047 0.223450627353346 0.229649155366345 0.224609204781726 0.230410571513902 0.223220196216047 0.232857423840309 0.223220196216047 0.233555143634260 5 5 - 17847233 17847776 17847500.818 17846853 17848452 - gene protein_coding_gene TRUE TRUE AT5G44260.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT1G03790.1); similar to putative CCCH-type zinc finger transcription factor [Gossypium hirsutum] (GB:AAX20386.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.756119198190759 6.26410148419062 7.28658165106808e-05 0.314124534977545 7.67525270211007 11.4554534075829 0.756119198190759 0.147950829362158 AT5G24870_at 5.6334755336549 5.75428958346192 7.9699303013636 7.79982614697259 7.84195895486023 7.29070603257514 7.0365621638369 6.99563929973642 6.00141282867031 6.67069487456337 5.12803837111814 4.26847030358046 6.30474249245201 5.86437618244094 4.25560261862652 6.77183837033746 7.56985777206847 6.06407300453040 6.29457026041642 0.190143010492548 0.187191202491776 0.196664303284472 0.186134457063788 0.189382037889983 0.189725270120931 0.188231405951924 0.183809079232166 0.187128539815893 0.182646843649872 0.195184313798214 0.197164768433048 0.183637764861741 0.182646843649872 0.197312444280081 0.185348298165888 0.182854956262940 0.18825023130623 0.190768488453303 5 5 - 8545023 8545901 8545315.636 8544788 8547792 - gene protein_coding_gene TRUE TRUE AT5G24870.1|AT5G24870.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G10650.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE80412.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.632740407278097 -6.25062001046944 7.42130141856631e-05 0.319858091140208 7.66076016134684 13.0905989406965 -0.632740407278097 0.102246741437962 AT5G57060_at 7.0159090976396 7.73426995425038 8.6357092851237 8.77321016848492 9.47147754370782 8.6275832867581 7.28200017024578 6.66611201366417 6.73096580367035 6.05032732737278 8.79886216326383 8.63757949302167 8.1016496890008 8.88213104508148 7.93202800925103 8.5796577590946 8.04251656739049 8.46825268502933 5.96729293420399 0.207615510645008 0.200567915149416 0.209129556403051 0.197126886625183 0.202809798209245 0.218181456245145 0.198117557932196 0.213243838601714 0.216478123744125 0.207370450619807 0.200251003254544 0.197373249737622 0.201346490251864 0.197902608588495 0.198879571390733 0.197126886625183 0.212402359648658 0.206853667475535 0.226387759996214 5 5|0 +|/ 23108269 23108995 23108627.444 23107378 23109214 + gene protein_coding_gene TRUE TRUE AT5G57060.1|AT5G57060.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26060.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79016.1); contains domain 60S RIBOSOMAL PROTEIN L18A (PTHR10052); contains domain 60S RIBOSOMAL PROTEIN L18A, PLANT (PTHR10052:SF2) 0.982392061730191 6.24971775796277 7.4304124387615e-05 0.320176471986233 7.65978914186034 15.3657156223880 0.982392061730191 0.220698950914852 AT5G52060_at 8.42197315259728 8.43438308971775 8.76922648886764 8.66930422083994 8.9779902706002 8.98166091827533 9.89762905871163 10.0234487319307 9.87367583131253 9.91825466143644 10.8634748552357 10.8715213235239 10.5968190904466 10.7114233958299 10.5076294937991 10.6647235526441 10.1698548002729 10.5563974767006 9.85696485065621 0.096388782022062 0.0966571880182682 0.09796097020827 0.097951217018071 0.0932903457873877 0.0968478603505424 0.0959498131099856 0.095539930489168 0.0934858282256277 0.0901916337277947 0.093784826360716 0.0951619315354224 0.0942945645420906 0.0970548070459802 0.0934703800436268 0.0935821255573531 0.0978698366369092 0.0911364701788105 0.0912456079171777 5 5|0 -|/ 21169701 21170388 21169943.8 21169440 21171470 - gene protein_coding_gene TRUE TRUE AT5G52060.1 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3), protein binding [Arabidopsis thaliana] (TAIR:AT5G07220.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71291.1); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.506843865806575 -6.24394471560213 7.48899369631116e-05 0.322625848437085 7.65357282404842 19.2722997979551 -0.506843865806575 0.0278948497673338 AT5G02630_at 4.71239207998818 5.11646527038778 6.33734016340542 6.63204468616891 6.44525591455339 6.73891883626615 4.47004591080442 4.71646600732914 4.08570673097511 4.18251720597187 5.43956857086703 5.54775253215715 5.26265294075807 5.33881661945608 5.40354524948969 5.55256264986474 5.50385885063245 5.23008929709459 3.73782527270657 0.252362656637375 0.241249833066124 0.24571997152995 0.246197240413863 0.241978065695351 0.255075142236685 0.242369366276097 0.252060115559861 0.264765141783024 0.251312761445799 0.257907385914834 0.253437545941246 0.24815190824454 0.241974944229280 0.250014109683654 0.241249833066124 0.248516768450853 0.253549084205909 0.246965857655741 5 5 + 592509 592969 592711.545 591769 593185 + gene protein_coding_gene TRUE TRUE AT5G02630.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18520.1); similar to putative lung seven transmembrane receptor 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD21602.1); similar to Os01g0836800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044733.1); similar to Os05g0462500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055767.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 0.646675244053234 6.22533471007493 7.68123184610131e-05 0.330830655611584 7.63349531906721 10.3520522296168 0.646675244053234 0.109050073990268 AT5G58420_at 8.7185761410886 8.87927116857149 8.75762401743382 8.7414374088565 8.92177231722328 8.89217269471947 8.8455919206512 8.85132284815182 8.33414497082835 8.52643199955643 8.90837681644003 9.49684527007615 8.77307190868227 8.73931570160594 9.35422781733855 8.84466438142106 8.70815040918278 8.85498959368883 8.2051328372378 0.127394442051980 0.128784854560875 0.131571630378973 0.131779907718388 0.128429473313722 0.129177539366028 0.132313009723825 0.127876193234587 0.150189214459481 0.134925922326519 0.12724809914408 0.12724809914408 0.130036871561551 0.131049033055957 0.134429924296386 0.12724809914408 0.134638759152471 0.128989035647133 0.132972968721021 5 5 + 23637459 23638094 23637861 23636732 23638320 + gene protein_coding_gene TRUE TRUE AT5G58420.1 40S ribosomal protein S4 (RPS4D) Identical to 40S ribosomal protein S4-1 (RPS4A) [Arabidopsis Thaliana] (GB:Q93VH9;GB:Q7XJS7); Identical to 40S ribosomal protein S4-3 (RPS4D) [Arabidopsis Thaliana] (GB:Q8VYK6;GB:Q944M1;GB:Q9FGI0); Identical to 40S ribosomal protein S4-2 (RPS4B) [Arabidopsis Thaliana] (GB:P49204;GB:Q42346;GB:Q9FL39;GB:Q9LYQ6); similar to 40S ribosomal protein S4 (RPS4B) [Arabidopsis thaliana] (TAIR:AT5G07090.1); similar to 40S ribosomal S4 protein [Glycine max] (GB:AAM93434.1); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain RNA-binding S4; (InterPro:IPR002942); contains InterPro domain Ribosomal protein S4E; (InterPro:IPR000876); contains InterPro domain KOW; (InterPro:IPR005824) -0.50464886012431 -6.21150930509273 7.8274683715276e-05 0.337050788077978 7.61854155559967 17.4835669845097 -0.50464886012431 0.0284325596615057 AT5G66460_at 3.16061576661669 2.96066647338914 3.13036618877264 2.60735802340630 3.67560433206138 3.20934418178345 3.38904764401373 3.68430378494532 3.71184947892882 3.45520786117177 3.56249865922057 4.23504979664696 3.55693685588982 3.69132302251741 3.53363978998772 3.98877271091839 3.65612322169799 3.73131891366098 4.33868445318877 0.233506094006489 0.232551686166601 0.243042421343912 0.231053850725270 0.229518237232999 0.243307802801982 0.250622750445902 0.235419687603690 0.236042751274095 0.230333168022362 0.229518237232999 0.229518237232999 0.236321105715334 0.240960258078720 0.238798232010486 0.233848612728737 0.249489909624263 0.24227728793513 0.233543438877957 5 5 - 26556248 26556793 26556571 26555621 26558262 - gene protein_coding_gene TRUE TRUE AT5G66460.1 (1-4)-beta-mannan endohydrolase, putative similar to (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G10890.1); similar to hypothetical protein [Thellun (GB:ABB45852.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547) -0.716090481350693 -6.21098312179746 7.83309263470729e-05 0.337214637924149 7.61797178476307 7.01701586724721 -0.716090481350693 0.136053544722007 AT5G11740_at 11.4620905057110 11.7680290960016 12.7011860444599 12.8139397820633 12.4057983942372 12.4344203453605 11.6441119060682 11.9919025091705 12.301779668532 11.7019752434741 13.8383035162052 13.2775773929443 13.2633687154533 13.3545114655841 13.2888097470005 12.8323644788783 12.4030197527968 13.1257215294323 11.7644888968641 0.0676139316104562 0.0645241067696496 0.0674618782144321 0.0636452737715424 0.0658226166171824 0.0649811223636222 0.0649092119400009 0.0679740818702327 0.0746063552314128 0.0685521795930675 0.0686473404269163 0.0636452737715424 0.0636452737715424 0.06773026927394 0.0699941534481368 0.0644551173273 0.076385825037602 0.0655634073363793 0.0642257923212669 5 5 + 3784320 3784448 3784390.545 3784252 3784793 + gene protein_coding_gene TRUE TRUE AT5G11740.1 AGP15 (ARABINOGALACTAN PROTEIN 15) Encodes arabinogalactan protein (AGP15). Identical to Arabinogalactan peptide 15 precursor (AG-peptide 15) (AGP15) [Arabidopsis Thaliana] (GB:Q9LYF6); similar to fiber protein Fb7 [Gossypium barbadense] (GB:AAN77148.1) 0.585090348665716 6.20986082918033 7.8451030635499e-05 0.337653235855188 7.61675636693639 24.7005385784225 0.585090348665716 0.0826486583587625 AT5G67180_at 3.11746185941329 3.12172886253298 3.38987493242611 3.26784045420714 3.65435342596542 3.13206472793965 4.26141346301459 3.68140127571642 3.48051649355123 4.21922210867731 4.84505624019308 4.82016724150992 4.83249989192611 3.96790564921413 4.57042300734594 4.14609086404126 3.693730774002 4.11241862919422 4.90842027515878 0.217598742837935 0.217705576093985 0.221234862295178 0.216393004603922 0.212380487681122 0.221579963627394 0.226105096228634 0.213741864167927 0.219971477910269 0.215344256129780 0.218527299908023 0.216146678841182 0.214554623006348 0.228011884616072 0.222207206184961 0.214691876592686 0.220895590088592 0.213859393492828 0.214465423240539 5 5|0 -|/ 26819441 26820386 26819877.3 26819175 26821475 - gene protein_coding_gene TRUE TRUE AT5G67180.1 AP2 domain-containing transcription factor, putative similar to AP2 (APETALA 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G36920.1); similar to LIPLESS1 [Antirrhinum majus] (GB:AAO52746.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.717478490504331 -6.20713402376623 7.87436681397877e-05 0.338834004005506 7.61380240308972 7.741395456639 -0.717478490504331 0.136714306269984 AT5G60590_at 3.9886045694614 3.95423131866496 5.18662921950085 5.40467654754175 4.88559371025235 4.82810874469256 3.31090191140752 3.56268664397312 2.60634444075966 2.56229293752337 3.20683443054282 3.11227729059253 2.85843384635346 3.01989000266198 3.15503625500266 3.37428376025812 3.43463213371815 3.69155614601087 1.67036130697219 0.271589341730714 0.270322699859271 0.297743050341053 0.293463073107078 0.272128512795828 0.288658195081331 0.272030218666117 0.272678590579454 0.282656261146351 0.278086487758723 0.274297013975765 0.27308860796574 0.271742229908460 0.282950510986936 0.275091381461455 0.271054867049234 0.281434144036977 0.269195186148881 0.270854406572719 5 5|0 +|/ 24374296 24375079 24374786.667 24374247 24375976 + gene protein_coding_gene TRUE TRUE AT5G60590.1|AT5G60590.2 yrdC protein-related similar to yrdC protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94505.1); contains InterPro domain SUA5/yciO/yrdC, N-terminal; (InterPro:IPR006070)|similar to yrdC family protein [Arabidopsis thaliana] (TAIR:AT3G01920.1); similar to yrdC protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94505.1); contains InterPro domain Sua5/YciO/YrdC/YwlC; (InterPro:IPR004388); contains InterPro domain SUA5/yciO/yrdC, N-terminal; (InterPro:IPR006070) 0.541145014923975 6.20662220347403 7.87987263875216e-05 0.338992120919118 7.61324780395879 7.1458211889673 0.541145014923975 0.0587943460785364 AT5G11790_at 7.71812034724196 7.4561593028879 7.32950142384445 6.8493891845832 7.78993306451110 7.12362573443061 9.68874274427943 9.1700369322424 8.27047108557531 8.72444786718206 10.2966553769626 10.4047483821985 9.60340127454266 10.0449265858456 10.1245233269670 9.59968559138092 9.0788428011242 9.72441179657442 8.83832304273432 0.178375984859531 0.190078826000966 0.183537637976072 0.199189653327185 0.178604829180326 0.190151694228333 0.175290475871307 0.175707950009129 0.194175453475963 0.177839722310578 0.175794108231295 0.180794282284615 0.172538519277330 0.178268525290437 0.176354334220414 0.175227325127121 0.186063333512773 0.176429499006071 0.177051562415891 5 5 + 3801467 3802470 3802180.727 3799551 3802793 + gene protein_coding_gene TRUE TRUE AT5G11790.1 Ndr family protein similar to Ndr family protein [Arabidopsis thaliana] (TAIR:AT5G56750.1); similar to Os02g0224800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046336.1); similar to Os01g0192600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042278.1); similar to putative pollen specific protein SF21 [Oryza sativa (japonica cultivar-group)] (GB:AAV59450.1); contains InterPro domain Ndr; (InterPro:IPR004142) -0.826671649055783 -6.20416457516449 7.90636771959568e-05 0.34005287561981 7.61058414058649 17.1260536203093 -0.826671649055783 0.174103014278022 AT5G08180_at 6.22670993222678 6.61357433247816 6.48721298717953 6.77800478681812 6.77546899912729 6.41236906475857 6.7807828927289 6.37928067804987 5.64381785969361 5.5671910633045 5.83279187658050 6.54554235843124 5.93880552964979 5.54637108671612 6.64491564478739 5.89886316400186 6.34904881803618 6.12846910603995 5.3343549210271 0.210682897613545 0.209301884454047 0.213039046382713 0.210124741610926 0.206323872314272 0.216696543662816 0.210171856462251 0.212856184470899 0.240672960930601 0.229235379358885 0.213150639991448 0.206323872314272 0.219304037745282 0.214326520457253 0.212059939095381 0.207380229762933 0.206323872314272 0.213351623107473 0.225159921854160 5 5|0 -|/ 2631872 2633347 2632404.8 2631655 2633456 - gene protein_coding_gene TRUE TRUE AT5G08180.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Identical to H/ACA ribonucleoprotein complex subunit 2-like protein (Nhp2-like protein) [Arabidopsis Thaliana] (GB:Q9LEY9); similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT5G20160.1); similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to hypothetical protein [Yarrowia lipolytica] (GB:XP_505678.1); similar to Os06g0274200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057374.1); similar to Os02g0728600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048001.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7AE; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038) -0.686320819649846 -6.19729423040613 7.98094306563658e-05 0.343180551822373 7.60313235558813 12.3695365738570 -0.686320819649846 0.125660748903660 AT5G43500_at 3.83781732477391 3.79547349716850 5.24352226980111 4.759959123707 6.53189145173024 5.50137659576373 3.93005365893639 3.60994215893056 3.11886473961555 2.67483374750636 4.44511993138291 4.60162344522514 4.71033780353243 4.68798268646382 5.27992290160721 5.02047217254117 4.91761758329626 4.91707108775993 3.44034759259088 0.239015644745566 0.246329397762563 0.244140342729175 0.255799806857946 0.246073391134341 0.258483294423004 0.246642088887081 0.239019534002134 0.262631213397002 0.239661914701983 0.242120424597445 0.238968768067272 0.243605088825329 0.239780408062015 0.250673288413738 0.243358741546834 0.255697692369365 0.245791513300725 0.245328493667636 5 0|5 /|+ 17489622 17490372 17490007.667 17486903 17490819 + gene protein_coding_gene TRUE TRUE AT5G43500.1|AT5G43500.2 ATARP9 (ACTIN-RELATED PROTEIN 9); protein binding encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. similar to novel protein similar to actin-related protein 8 [Xenopus tropicalis] (GB:CAJ83392.1); similar to Os04g0177600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052170.1); similar to OSJNBa0096F01.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04100.3); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 0.922202807267342 6.19698533551174 7.98431368078676e-05 0.343245645137023 7.6027971295995 8.60152141579161 0.922202807267342 0.204765321740551 AT5G24110_at 2.18301611555258 2.44146901833699 4.22939742048423 4.70209937265948 2.74394506781917 2.59786670203040 0.343790937660621 0.775031670854778 2.07286810969773 1.50599429289040 1.24735617502795 2.06548743650499 1.14978299388042 0.830121364027417 1.36995858570804 0.760255922860951 0.775200819904267 1.11838791028879 1.29063940329113 0.220014861227935 0.209710836298014 0.218985175042394 0.210404321671305 0.207325286210284 0.209726201310947 0.211571976259121 0.217944449008684 0.218720353321278 0.224310425156539 0.236210856417053 0.21031981474816 0.209805464533986 0.208573144508188 0.209674153942737 0.217137836737551 0.234649790146328 0.220854974181294 0.207325286210284 5 5 - 8153419 8154159 8153676.455 8153118 8154712 - gene protein_coding_gene TRUE TRUE AT5G24110.1 WRKY30 (WRKY DNA-binding protein 30); transcription factor member of WRKY Transcription Factor; Group III Identical to Probable WRKY transcription factor 30 (WRKY DNA-binding protein 30) (WRKY30) [Arabidopsis Thaliana] (GB:Q9FL62); similar to WRKY53 (WRKY DNA-binding protein 53), transcription factor [Arabidopsis thaliana] (TAIR:AT4G23810.1); similar to putative WRKY transcription factor 30 [Vitis aestivalis] (GB:AAR92477.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.676320136887916 6.19251863979829 8.03322451877856e-05 0.345267989817102 7.5979478593656 3.89594512300067 0.676320136887916 0.122068262588535 AT5G60790_at 8.61620964818834 8.66579205163502 9.78901628460852 9.82936654059447 9.57763839514538 9.23678883299945 9.09195778725406 8.96793535463125 7.50493880432183 7.23695092970719 9.03566254949936 9.36634395212628 9.26595097043295 8.84891378266905 9.34571767109393 9.06836566717077 9.2348393831765 8.73982300669359 6.7223086540225 0.152441852334702 0.143041501804981 0.151314967755584 0.151536447731728 0.148097869410039 0.152060703289527 0.148430424371592 0.149254635357452 0.156607458413900 0.174492845828358 0.147942392086757 0.147700301950342 0.143041501804981 0.148693037277629 0.145320719231629 0.146775559937793 0.151564763961515 0.143917978848256 0.184382392487902 5 5 - 24471096 24471553 24471310.364 24470484 24473196 - gene protein_coding_gene TRUE TRUE AT5G60790.1 ATGCN1 (Arabidopsis thaliana general control non-repressible 1) member of GCN subfamily similar to ATGCN4 (Arabidopsis thaliana general control non-repressible 4) [Arabidopsis thaliana] (TAIR:AT3G54540.1); similar to ABC transporter homolog [Populus nigra] (GB:BAA94511.1); similar to ATP-binding cassette transporter [Pteris vittata] (GB:AAS77222.1); similar to PREDICTED: similar to CG9281-PB, isoform B [Tribolium castaneum] (GB:XP_966990.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.547614631790212 6.18833652603909 8.07931032246412e-05 0.347167964556283 7.59340445786911 17.3558055713195 0.547614631790212 0.0637364216653071 AT5G20950_at 10.2547321964976 10.2535923296431 9.90583296467569 9.9664075186019 10.2952256663892 10.4030898005571 9.18419042812525 9.08273044372578 9.58379001437156 8.9849509788595 8.85941470388596 9.61774081783288 9.1795249948314 8.92561616627071 9.51115511524693 8.90304486326813 9.25842045363794 9.29110681908766 9.11397688642649 0.0932011811450337 0.0942911916709479 0.0941549505436384 0.0946504969066212 0.0946170865517067 0.0958729769507186 0.0920911086710416 0.0953516601619466 0.113246581905832 0.0937018507979184 0.103964487482099 0.0912502538306005 0.0955901990714702 0.102591973957500 0.0934166309259453 0.0905275592056003 0.09527337653755 0.0937425433727825 0.0929160751148822 5 5 - 7107654 7108321 7107980.273 7107378 7111351 - gene protein_coding_gene TRUE TRUE AT5G20950.1|AT5G20950.2 glycosyl hydrolase family 3 protein similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G62710.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G20940.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G04885.1); similar to beta-D-glucan exohydrolase [Nicotiana tabacum] (GB:BAA33065.1); similar to beta-D-glucosidase [Tropaeolum majus] (GB:CAA07070.1); similar to beta-D-glucosidase [Gossypium hirsutum] (GB:AAQ17461.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) -0.502072314356778 -6.18719967164215 8.09188708698528e-05 0.347627469256887 7.59216887562096 19.1286379776821 -0.502072314356778 0.0276884086180135 AT5G24660_at 8.33095903852226 8.69917772069248 9.37684543761428 9.53886838000682 9.02921098895838 9.07355764704192 9.80641231454021 9.71018012615992 8.62501372287794 9.17977936730916 9.67754513679352 8.16766664476929 8.87947420487968 9.5953498924653 8.01989461017005 8.6252615775257 9.09912130998435 8.8746852848137 7.83856324523256 0.144228092120528 0.141479380870711 0.143514105107989 0.139331419425273 0.139654887082829 0.154978284429052 0.139476768188846 0.145169632138245 0.153896446982624 0.144086115676905 0.141734672126835 0.147034161816937 0.146506623068727 0.139331419425273 0.157149651589959 0.146032811401984 0.149603534048929 0.149011094697377 0.149796789164534 5 5 - 8443509 8443705 8443588.727 8443282 8443837 - gene protein_coding_gene TRUE TRUE AT5G24660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24655.1); similar to unknown protein [Brassica rapa subsp. pekinensis] (GB:AAQ92331.1) -0.562040527701897 -6.18623192924112 8.10260953637445e-05 0.348007079587283 7.59111691760061 17.9032315955996 -0.562040527701897 0.0719923400354247 AT5G67080_at 1.08795381901353 1.24339006666366 3.07996140999038 3.0872313227392 1.02429813088219 1.11756131758917 0.759729477052745 0.81203308285768 1.25610046306277 0.664674221206377 0.78660069881477 0.873364319006857 1.00982320055763 0.928114067397525 0.672211245275491 1.16342490071884 1.23812781254412 1.10989290663706 0.797782370781069 0.203451079550837 0.203526309026599 0.210120962646089 0.208711273044669 0.204157403615967 0.206074639619034 0.201215761813943 0.201215761813943 0.209373179140408 0.211727121349141 0.204907921129667 0.201684980140618 0.203367170829009 0.204959821397261 0.202113665520326 0.205580258206116 0.207114254327784 0.203183427078228 0.205917766192326 5 5 + 26790463 26790961 26790719.091 26789952 26790986 + gene protein_coding_gene TRUE TRUE AT5G67080.1 MAPKKK19 (Mitogen-activated protein kinase kinase kinase 19); kinase member of MEKK subfamily similar to MAPKKK20 (Mitogen-activated protein kinase kinase kinase 20), kinase [Arabidopsis thaliana] (TAIR:AT3G50310.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93553.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.502989021526952 6.14564022135391 8.56636271958884e-05 0.367839615179145 7.54684851668437 2.46596011779146 0.502989021526952 0.0326734207542633 AT5G56220_at 1.80433876407431 1.51849570079853 1.93829229952456 1.99431365892715 2.14667116720763 2.47942794604368 1.34341584937468 1.32815896887667 2.05796801531526 1.57078070768056 3.05279644229088 2.94277033536624 2.59026279001275 2.52497174787795 3.15084303161658 2.79921448340985 2.36991193224377 2.81053536232097 2.13187327269038 0.187441403032402 0.187686395954945 0.198977175962576 0.194699924391455 0.188849064678189 0.189508363159248 0.199417820626023 0.184126574944326 0.198651443985879 0.184027522748620 0.188709934480899 0.189476167504817 0.194827717792422 0.186950826965627 0.190690076796953 0.187191020597154 0.186115372435159 0.194030537460953 0.194759249456999 5 5 + 22774421 22774950 22774672.182 22772044 22775146 + gene protein_coding_gene TRUE TRUE AT5G56220.1 nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT4G23440.1); similar to putative ATPase [Triticum aestivum] (GB:CAJ19360.1); similar to Os08g0499100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062146.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.566922159345028 6.1448664728224 8.57547424914118e-05 0.368145109515631 7.5460019426508 4.16932459312229 0.566922159345028 0.0765763457149763 AT5G23810_at 3.58272692787135 3.45391988221124 5.11202257132065 4.94223680878976 6.04349128017562 5.74809534223817 3.62547819966141 2.58880092622427 2.65097760011709 2.59529196617713 3.11912888920626 3.65618741885946 2.48842422740776 2.92490114338886 3.51967174081723 3.1092285770625 3.64976251886376 3.34340638894661 1.90456647657071 0.27332556841973 0.27332556841973 0.279926694201082 0.275495962705189 0.280572214150436 0.290558535370208 0.27332556841973 0.27332556841973 0.279066059443995 0.27535632280825 0.277177700375999 0.276371644202848 0.276087315828753 0.285565899723252 0.27332556841973 0.27332556841973 0.281574067816631 0.275561397619777 0.276499789504683 5 5 + 8029864 8030649 8030244.909 8028381 8030819 + gene protein_coding_gene TRUE TRUE AT5G23810.1|AT5G23810.2 AAP7 (amino acid permease 7); amino acid permease|AAP7 (amino acid permease 7) Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to Os02g0722400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047966.1); similar to amino acid permease AAP4 [Vicia faba var. minor] (GB:CAC51425.1); similar to Os04g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053053.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057)|similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to Os02g0722400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047966.1); similar to amino acid transporter [Pisum sativum] (GB:AAX56951.1); similar to Os04g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053053.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.867143111221257 6.1370959148534 8.66755692312123e-05 0.372011543140363 7.53749432126243 7.19207193099024 0.867143111221257 0.190153689076018 AT5G05270_at 0.736193632558214 1.17170360996934 1.01551090496944 1.23505892643029 1.22320255113599 1.55286387643374 2.34283062050384 2.12700143782447 0.960271910732776 1.53993102923233 2.92595413015105 4.31535903202973 3.54465305348047 3.39105625916917 3.40685081743871 3.23265185683344 2.76118352844637 2.06102204169834 1.41757693151593 0.320912021974661 0.295370346586191 0.299911617648573 0.294282878829797 0.299645391654288 0.299769193770549 0.294282878829797 0.294282878829797 0.299973563696856 0.294282878829797 0.302989708689774 0.329369475925024 0.296811792165161 0.305192999845654 0.311816906693104 0.296884434457803 0.305062662779804 0.294282878829797 0.29998931896307 5 0|5 /|+ 1563844 1564802 1564348.333 1563321 1565008 + gene protein_coding_gene TRUE TRUE AT5G05270.1|AT5G05270.2 chalcone-flavanone isomerase family protein similar to TT5 (TRANSPARENT TESTA 5), chalcone isomerase [Arabidopsis thaliana] (TAIR:AT3G55120.1); similar to Os12g0115700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065990.1); similar to putative chalcone isomerase 4 [Glycine max] (GB:AAT94362.1); similar to Os11g0116300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065587.1); contains InterPro domain Chalcone-flavanone isomerase; (InterPro:IPR003466) 0.635110066704529 6.12673368890338 8.79200313217594e-05 0.377264854401670 7.5261330752496 3.68092967684463 0.635110066704529 0.108505287960606 AT5G13000_at 8.30752348058993 8.28611093041325 8.69972235543347 8.67946815819346 9.17306406333294 8.93371384903578 9.086327895293 9.20891479603747 9.31954048059484 9.48526288732271 9.93014603886248 10.0083073258945 9.48540018984674 9.8128481056623 9.70395100293245 9.87900578581206 9.38966111742915 9.75281016417953 9.47873549244354 0.102457533436079 0.101990822489668 0.0992735117230006 0.101816262965969 0.0972017945473814 0.107861719269883 0.0962246787613008 0.099545362650818 0.114447863016812 0.095785745868556 0.100772590572463 0.100373702052583 0.096382502420048 0.0972655436570107 0.106816586457419 0.10024861002503 0.116317602579823 0.102305360338016 0.0965846186487474 5 5 - 4110464 4111306 4110678.3 4110298 4121430 - gene protein_coding_gene TRUE TRUE AT5G13000.1 ATGSL12 (GLUCAN SYNTHASE-LIKE 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups encodes a gene similar to callose synthase similar to ATGSL03 (GLUCAN SYNTHASE-LIKE 3), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G31960.1); similar to CALS1 (CALLOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G05570.1); similar to CALS5 (CALLOSE SYNTHASE 5), 1,3-beta-glucan synthase [Arabidopsis thaliana] (TAIR:AT2G13680.1); similar to putative callose synthase 1 catalytic subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD23015.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93351.1); similar to putative callose synthase 1 catalytic subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD62105.1); contains InterPro domain Hpt; (InterPro:IPR008207); contains InterPro domain Glycosyl transferase, family 48; (InterPro:IPR003440) -0.516894521083357 -6.12425397157052 8.8220665112162e-05 0.378466653331175 7.52341155370074 18.3834119425984 -0.516894521083357 0.0468159415731206 AT5G60960_at 5.0280731236586 5.24176754612308 6.04697685279831 5.84974953255248 5.49853739517148 5.00009108242844 5.5905634848105 5.95490422795743 5.25270539355089 5.84181278964696 6.27585712628498 6.98138378687305 5.93853350106273 6.31311143278081 6.68356658544204 6.34527765619096 6.0757290854466 5.7103341011359 6.10335348604033 0.205810214145213 0.207610412875517 0.2068262301062 0.215168021746414 0.206824291823124 0.212926380500592 0.206329702949055 0.211447503788726 0.219811251929483 0.205595497120578 0.209812418417657 0.212140653079003 0.209683819257268 0.212080484658022 0.219357657512324 0.212069830884958 0.208140685610378 0.208658709603360 0.20631152377995 5 5 - 24545694 24546139 24545923.818 24545476 24547237 - gene protein_coding_gene TRUE TRUE AT5G60960.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G61370.1); similar to Os07g0603900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060217.1); similar to Os02g0601600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047351.1); similar to putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22160.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.658078425681883 -6.11852654454625 8.89192593489311e-05 0.381374703347565 7.51712158936276 11.5378819302616 -0.658078425681883 0.118103541891935 AT5G20930_at 5.08663817118785 5.31860138451929 6.57893008166379 6.85038147859248 6.9581732091841 6.605433369865 4.9559510628866 5.03597492153898 4.29768930133195 4.31719129238435 5.68523817957115 5.82355815286342 5.61747563572553 6.16931582342971 5.81820775945139 6.05824812882916 6.00203465877567 5.82498646937614 4.51584671430404 0.213141996369293 0.203965215867718 0.212081096181835 0.204375701842977 0.211057719623299 0.212994496974509 0.214780643045599 0.210012267762757 0.213245151583794 0.216066176585479 0.203696419481653 0.210124417810761 0.207633089555972 0.221962408885021 0.21007807885717 0.203696419481653 0.213369858470039 0.209916400263928 0.206268504856668 5 5|0 +|/ 7102142 7102937 7102573.8 7097910 7103200 + gene protein_coding_gene TRUE TRUE AT5G20930.1 TSL (TOUSLED); kinase Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. Identical to Serine/threonine-protein kinase TOUSLED (EC 2.7.11.1) (TOUSLED) [Arabidopsis Thaliana] (GB:Q39238;GB:Q8LPL1); similar to ATAUR3 (ATAURORA3), ATP binding / histone serine kinase(H3-S10 specific) / protein kinase [Arabidopsis thaliana] (TAIR:AT2G45490.1); similar to tousled-like kinase 1 [Zea mays] (GB:AAT66019.1); similar to tousled-like protein kinase [Triticum aestivum] (GB:AAW31855.1); similar to tousled-like kinase 2 [Zea mays] (GB:AAR35033.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.587398910998508 6.11754203269064 8.90399394274883e-05 0.381803260265070 7.51603981250089 11.0496565617679 0.587398910998508 0.087955704145813 AT5G14800_at 6.7224523513453 6.67023613507097 6.76279376922646 7.3783608276887 7.04893281389329 7.01491669446883 6.30041398296543 6.73386861431468 6.25024477211054 6.29427541018412 6.4714746390537 6.24420542187423 6.32242646604809 6.4580604723067 7.07905957217663 6.48577143759768 6.78693862855584 6.42065360765105 6.261682451836 0.198270973574372 0.197824882087578 0.200511903487475 0.215431163963499 0.198006578873047 0.218329226188951 0.212286845055548 0.199121311486636 0.196560654849585 0.208786446957989 0.196045699299249 0.199022555578754 0.198453809318628 0.202001746910088 0.205405301451707 0.19628043703692 0.204145304748630 0.202556467495888 0.202169397830388 5 5|0 -|/ 4786207 4786928 4786513.667 4785965 4787842 - gene protein_coding_gene TRUE TRUE AT5G14800.1|AT5G14800.2 P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE); pyrroline-5-carboxylate reductase|P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis. Identical to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) (PROC1) [Arabidopsis Thaliana] (GB:P54904); similar to Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase) (GB:P17817); contains InterPro domain Delta 1-pyrroline-5-carboxylate reductase; (InterPro:IPR000304); contains InterPro domain NADP oxidoreductase, coenzyme F420-dependent; (InterPro:IPR004455) -0.690707252446258 -6.11554657014587 8.92850789564267e-05 0.382765133486201 7.51384669657913 13.2301508946391 -0.690707252446258 0.130732387387621 AT5G65890_at 6.6481627914277 6.53355504133759 7.20534827116337 6.87399608957879 7.20400380030641 7.13393932286058 7.4554082340594 7.5543253089356 6.83046186199707 7.03278064651632 8.10915144597189 8.54171248126083 8.13737722325873 7.89873774155944 8.2790782681462 8.37324811580148 7.94250102915548 7.20853668024783 7.73857946839464 0.222037512602139 0.219601836764852 0.217248470437864 0.217116197272220 0.203291064893128 0.214737383037756 0.203291064893128 0.208813719318104 0.212381352495266 0.21765065248047 0.204519566017702 0.209166223101375 0.212495523799017 0.211064752033333 0.209690457613503 0.209296212936683 0.207967623201271 0.207368217078946 0.207854243631655 5 5 + 26374391 26374917 26374639.273 26372079 26375092 + gene protein_coding_gene TRUE TRUE AT5G65890.1|AT5G65890.2 ACR1 (ACT DOMAIN REPEAT 1) Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques. similar to ACR3 (ACT Domain Repeat 3) [Arabidopsis thaliana] (TAIR:AT1G76990.4); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912)|similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G25320.1); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) -0.541789127896477 -6.11377710504138 8.9503059877909e-05 0.383610114636718 7.5119013905175 14.7070424568643 -0.541789127896477 0.0641990408364517 AT5G44420_at 3.26406246424332 3.41965397578077 2.66701044417079 2.60105545620043 2.59773826458377 2.84222395433716 1.77384422790213 2.10255092925177 4.29802853322352 2.42297245217696 2.26240751045101 2.35576424296583 2.29507735276608 2.45757116980742 2.59930664183079 2.32862452187502 2.15256528654557 2.29299663332036 1.91217585011521 0.186656110660458 0.18751535205929 0.184305758187419 0.184717827379668 0.177840039285197 0.180732225522208 0.179596238314862 0.181336020557392 0.189134910126983 0.180434460199244 0.181940411353373 0.180353805281659 0.177856851834022 0.181959135707692 0.185124318607060 0.179170172335034 0.180662224918273 0.177840039285197 0.182645855352313 5 0|5 /|- 17924483 17924598 17924504.833 17924296 17924825 - gene protein_coding_gene TRUE TRUE AT5G44420.1 PDF1.2 (Low-molecular-weight cysteine-rich 77) Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Identical to Low-molecular cysteine-rich antifungal protein LCR77 precursor (LCR77) [Arabidopsis Thaliana] (GB:Q9FI23;GB:P82786); similar to PDF1.2b (plant defensin 1.2b) [Arabidopsis thaliana] (TAIR:AT2G26020.1); similar to antifungal protein [Sinapis alba] (GB:AAY15221.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) -0.563725335010582 -6.10787832068113 9.02338603694664e-05 0.386652091683164 7.50541252187172 5.26889985545068 -0.563725335010582 0.0766888236681276 AT5G22250_at 4.53337329477803 4.91368248418478 6.32539131493967 6.64322456099989 4.86103422956387 5.25292713058841 2.22392924075018 2.69539006922945 3.01963723927684 2.63778747061811 3.05924209986442 3.40310334533747 2.71228138621396 3.23771300030026 3.39717817394858 3.1224199431053 3.40200309429119 3.09704290124644 2.07162861821279 0.234548596446988 0.235006025215144 0.249278012788019 0.241326629859585 0.235642430646643 0.254180554665202 0.230276442363007 0.234689143877269 0.247508672842160 0.233712889465130 0.231017344028673 0.227788667548979 0.239330942997151 0.241302335221585 0.227788667548979 0.23712195180125 0.248966593499047 0.234154172920879 0.229314908612856 5 5 - 7365691 7366147 7365966.545 7365535 7366781 - gene protein_coding_gene TRUE TRUE AT5G22250.1 CCR4-NOT transcription complex protein, putative similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT3G44260.1); similar to CCR4 associated factor 1-related protein [Capsicum annuum] (GB:ABG66307.1); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.705002965159443 6.10593889220066 9.04755303256182e-05 0.387597171914949 7.50327777468898 7.55873109183313 0.705002965159443 0.136429036812738 AT5G07510_at 3.14236234228011 2.91006159103876 3.16698544186693 2.94226393209462 2.7388044975773 2.71030690589677 3.03570997982291 2.69044156043412 3.45406409885135 2.98486770294083 3.22458905098069 2.70571980962636 3.06541526687816 2.92206186398273 3.72083289475222 3.10398606449605 3.26438847532285 3.33847695873364 3.57753091377781 0.197347823661618 0.197845782987321 0.198775535121855 0.193723106336571 0.202813789873363 0.192472845075360 0.207222395362524 0.197794324784417 0.193815247148547 0.195016526117553 0.192472845075360 0.192472845075360 0.195432465175567 0.194732586339320 0.194432508412642 0.197448554077434 0.202401141202944 0.197276020674484 0.193949039130792 5 5|0 -|/ 2377875 2378732 2378122.1 2377711 2378830 - gene protein_coding_gene TRUE TRUE AT5G07510.1|AT5G07510.2|AT5G07510.3 GRP14 (Glycine rich protein 14); nutrient reservoir|GRP14 (Glycine rich protein 14) encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. similar to GRP18 (Glycine rich protein 18), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G07520.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15459.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.57386664369044 -6.10478208332025 9.0620008978903e-05 0.388125498456641 7.50200415595327 6.17061938301973 -0.57386664369044 0.0819931810334104 AT5G16630_at 7.19085212810314 7.18294679529635 8.02312502678224 7.85933384642036 8.58517866569339 8.07120642610652 8.21818054567938 7.80635010837223 7.90892902841427 7.4497354623902 7.86678082364762 8.02520268812408 7.79092047888639 8.0935091490123 7.37536132156901 8.36528048916222 7.74891632858718 7.61715007282826 8.12007490540732 0.159233676855053 0.153381103885305 0.152276325150075 0.157772657603078 0.154876276142287 0.153707769367425 0.163415496656450 0.158516932451748 0.166064594662363 0.155177900518912 0.154266251915556 0.154022553845141 0.161566388808032 0.151472102400911 0.153882659751468 0.152014108307937 0.161731331910216 0.151468149175043 0.161404457057384 5 5|0 +|/ 5458776 5459433 5459023.9 5454806 5459620 + gene protein_coding_gene TRUE TRUE AT5G16630.1|AT5G16630.2 DNA repair protein Rad4 family|damaged DNA binding similar to Os08g0427500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061843.1); similar to PREDICTED: similar to DNA-repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C complementing protein homolog) (p125) [Rattus norve (GB:XP_232194.2); contains InterPro domain DNA repair protein Rad4; (InterPro:IPR004583) -0.653607318085658 -6.09216416775137 9.22120599784433e-05 0.394852040827694 7.48809716613344 15.7104650099972 -0.653607318085658 0.117455786206173 AT5G54670_at 0.455646156256796 0.864718258933685 1.05878889037389 0.896379833212764 1.27408720255740 0.935372067443766 1.22219510037529 1.1258088341649 0.890629475948228 0.553966619144438 1.94862785635355 2.61575165236152 2.09408625566325 1.71893394505351 2.41799006979095 2.02856656055025 1.42392355693812 2.03439155263231 0.931552884225296 0.231533600526591 0.228463365036058 0.228463365036058 0.237060540977621 0.228463365036058 0.231247338737564 0.231740829088481 0.234620807451945 0.249820672962116 0.228463365036058 0.235846309446442 0.241748912864864 0.228463365036058 0.230104293659174 0.228890008303274 0.228463365036058 0.238135855971478 0.228463365036058 0.229520611420624 5 5|0 +|/ 22230161 22231010 22230577.125 22226698 22231360 + gene protein_coding_gene TRUE TRUE AT5G54670.1 ATK3 (ARABIDOPSIS THALIANA KINESIN 3); microtubule motor Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. Identical to Kinesin-3 (Kinesin-like protein C) (ATK3) [Arabidopsis Thaliana] (GB:P46875;GB:Q9FH38); similar to ATK5 (Arabidopsis thaliana kinesin 5), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G05190.1); similar to ATK1 (ARABIDOPSIS THALIANA KINESIN 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G21270.1); similar to ATK2 (ARABIDOPSIS THALIANA KINESIN 2), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G27180.1); similar to H0323C08.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86215.1); similar to Kinesin, motor re (GB:ABE93171.1); similar to Os04g0629700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053970.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) 0.605285517536264 6.08573021355868 9.30353658091642e-05 0.398284401029032 7.48099534178876 2.39279133838510 0.605285517536264 0.0975474221507836 AT5G55580_at 3.33393144513019 3.64504927361821 4.2888316489188 4.210063339338 4.88905272194896 4.57246177611753 5.71824252997869 5.41654944390943 3.43324611051336 3.61961807737084 3.87724687232882 4.02914107927046 4.59112506990773 4.1274157803733 3.814302647661 4.25914730590962 4.3255582173777 3.70756640065031 3.96057494407214 0.213794420017387 0.212205812317335 0.217868466125435 0.213666289523658 0.211917255908364 0.213706748475357 0.217625002352335 0.217261091600538 0.216049365349363 0.221938225827948 0.213544522514957 0.213692324675065 0.213248248043846 0.211450141936117 0.219865138695744 0.209389808216950 0.235888210210976 0.219350574388766 0.218017147663247 5 5|0 +|/ 22533994 22534573 22534246.6 22532666 22535155 + gene protein_coding_gene TRUE TRUE AT5G55580.1 mitochondrial transcription termination factor family protein / mTERF family protein similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G78930.1); similar to Mitochondrial transcription termination factor, mTERF (ISS) [Ostreococcus tauri] (GB:CAL50299.1); similar to Os07g0583200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060114.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) -0.595032100606347 -6.06470801823533 9.57807652013963e-05 0.409941675061976 7.45774115909923 8.3905649218718 -0.595032100606347 0.0938727514719081 AT5G47540_at 5.57619654745161 5.73190853349956 5.81946605951797 6.0595194554534 6.50831881103328 5.42700565586459 6.31496794650546 6.62258392744915 6.38532295079145 5.94393291257055 6.7557542887547 7.39763482789092 6.61440519305801 6.1328778933101 6.59217278593323 6.25702871348687 6.21824357591102 5.97979916903844 5.92989136889284 0.238470310851905 0.229564862878513 0.225549917243675 0.234880345246173 0.233340779532322 0.228016616837996 0.232142383459203 0.232282422620661 0.235074149330252 0.244491560701351 0.225752141002897 0.226662545852615 0.225549917243675 0.24385270527801 0.238178493070265 0.225549917243675 0.242103732901409 0.246789031555888 0.232919185050070 5 5|0 -|/ 19300492 19301714 19301109.778 19300492 19302554 - gene protein_coding_gene TRUE TRUE AT5G47540.1 Mo25 family protein Identical to Putative MO25-like protein At5g47540 [Arabidopsis Thaliana] (GB:Q9FGK3); similar to Mo25 family protein [Arabidopsis thaliana] (TAIR:AT4G17270.1); similar to MO25 protein -related [Brassica oleracea] (GB:ABD64974.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.88927448444026 -6.06045776179137 9.63463005859015e-05 0.412265820207073 7.4530303640797 12.2974318504341 -0.88927448444026 0.200753672703259 AT5G23330_at 5.85674557864169 6.52537805023063 7.05188258417268 6.55064802592584 7.14354048835626 6.76334921959419 6.72206798562132 6.19106032163157 5.35293622080222 5.93453458924818 4.82362276842321 5.54176925352657 5.78080752558296 6.17270924670787 5.98977290589737 6.05380660308621 6.25819323500432 5.12731978097575 6.2875539642815 0.210685835510905 0.208559458086829 0.217627434941427 0.208559458086829 0.208559458086829 0.222734605989392 0.214058710787724 0.208559458086829 0.222099549148916 0.209521591367702 0.212798963078264 0.209586661620743 0.223064845170835 0.219867832419882 0.226859855734696 0.215814734550354 0.214628639999789 0.213040590673793 0.209451141121494 5 5 + 7855077 7855676 7855385 7854132 7855816 + gene protein_coding_gene TRUE TRUE AT5G23330.1 riboflavin biosynthesis protein-related similar to riboflavin biosynthesis protein-related [Arabidopsis thaliana] (TAIR:AT5G08340.1); similar to unknow protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72379.1); similar to Os03g0801700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051594.1); similar to riboflavin biosynthesis protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99395.1); contains InterPro domain Riboflavin kinase / FAD synthetase; (InterPro:IPR002606) -0.83422560413965 -6.04738348947335 9.8108482455602e-05 0.419708087945066 7.43851983872757 12.3890049099440 -0.83422560413965 0.183537505049649 AT5G42680_at 5.43780440281384 5.67362711911653 5.11844738180191 5.17297315840493 5.95785444304458 5.90108653994388 5.83307198190415 6.09184012712066 6.60675770736287 5.96223369818728 7.48971800578912 7.15281235035312 7.37538904575146 7.30709365078027 7.28559622546628 7.90636240845361 7.52270159275773 8.02656768936684 6.21998388688353 0.187779758636755 0.188402032698024 0.205512466087922 0.198118998806647 0.188434379874705 0.194648238441398 0.194276842841708 0.187779758636755 0.198576799512468 0.196262435845953 0.189143001842766 0.187779758636755 0.191370529481697 0.19306362448664 0.190943493860448 0.195420741506803 0.198477230695936 0.201067183575079 0.193575353276821 5 5 + 17132009 17132559 17132258.182 17131824 17132645 + gene protein_coding_gene TRUE TRUE AT5G42680.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21990.1); similar to Os09g0463600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063406.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09202.1); contains InterPro domain Protein of unknown function DUF617, plant; (InterPro:IPR006460) -0.531741123871538 -6.03905714891821 9.92486917883223e-05 0.424486654778655 7.42926340332887 12.533974086886 -0.531741123871538 0.0620996145917307 AT5G48360_at 2.72576855130324 2.75793179690698 2.38883433829402 2.46750729353996 2.0707043146987 2.61415652238828 2.85787431740185 3.25242675406776 3.20639099363234 3.41357405888278 4.03460585972109 4.32623633377142 3.53702352498530 3.40852136849579 4.13032913549517 3.45542513338098 2.84359815670564 3.50070873159628 3.87554643632354 0.227926758061599 0.230150259742125 0.237920272383423 0.236063576460074 0.227926758061599 0.231430905847873 0.227926758061599 0.231697418486874 0.23607733007193 0.246558014700450 0.231476147356624 0.248165316448456 0.236465415894741 0.241309167166067 0.238034861116055 0.233581585941369 0.229119972130081 0.231230255756005 0.235880749983121 5 5 + 19614971 19615510 19615273 19612883 19615718 + gene protein_coding_gene TRUE TRUE AT5G48360.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07540.1); similar to FH protein NFH2 [Nicotiana tabacum] (GB:AAF24497.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) -0.646972854326235 -6.0375330572494 9.94589328843962e-05 0.425286397013678 7.42756776291492 6.21843041614102 -0.646972854326235 0.117146099455031 AT5G36220_at 8.74749087479932 8.48684746726873 9.03254111158317 8.78765167575647 9.04660988567173 8.555134614946 6.77555465028416 6.04089900314472 5.49614011103431 6.56658914278366 7.6544540919212 7.53098748316521 7.66875882617602 7.89254989856034 6.64556034639612 8.77392583545427 8.53492483779403 8.49379850060378 5.10400738229967 0.214451910994192 0.201105858009888 0.207737556961753 0.2062141754181 0.201105858009888 0.211660165196881 0.206256835056636 0.219226191988508 0.240886391252052 0.213153588381818 0.207620350774707 0.209410082928058 0.2074255883847 0.221234240053181 0.217673486857617 0.201105858009888 0.213160725552619 0.201105858009888 0.228536643155578 5 5 - 14271075 14271620 14271356.545 14270920 14273263 - gene protein_coding_gene TRUE TRUE AT5G36220.1 CYP81D1 (CYTOCHROME P450 91A1); oxygen binding member of CYP81D Identical to Cytochrome P450 81D1 (EC 1.14.-.-) (CYP81D1) [Arabidopsis Thaliana] (GB:Q9FG65;GB:O65789); similar to CYP81D8 (cytochrome P450, family 81, subfamily D, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G37370.1); similar to CYP81E8 [Medicago truncatula] (GB:AAQ20042.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.77758053097765 6.03733394352916 9.94864348588443e-05 0.425304509021560 7.42734620763048 14.9948989218725 0.77758053097765 0.165008568730243 AT5G67280_at 6.7565362877242 6.9714759281817 6.92576732468478 6.96068802335892 7.57838255853312 7.78713294166829 8.00664522456517 8.25301995834358 7.32166268087013 7.93569598159612 8.57337542084666 9.52029431487857 8.41570383522176 8.81300127535511 8.71476486123738 8.85166480858462 7.86608413758895 8.5181127137421 7.7228391744548 0.160294390866446 0.158924279451409 0.160406164947318 0.156308045665816 0.148483490962553 0.15654145211949 0.148483490962553 0.154682849196017 0.171673090635666 0.156747276274764 0.148483490962553 0.156380609706912 0.157519351387567 0.155844400707786 0.156990363767978 0.151202435966264 0.162607304426703 0.158521654803143 0.148483490962553 5 5 - 26859661 26860208 26859935.273 26859496 26862416 - gene protein_coding_gene TRUE TRUE AT5G67280.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G37250.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G23300.1); similar to Os06g0638500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058153.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91521.1); similar to Os09g0110100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062569.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.540121533594715 -6.0340558736405 9.99403805936735e-05 0.427145186657360 7.42369768804957 15.5645515891686 -0.540121533594715 0.0674015672265124 AT5G61360_at 2.77025559588159 2.69906313654241 2.95012973567597 3.47532191565509 3.55372109677084 3.46351800859698 1.49234868199300 1.76256486914097 1.08417272561354 1.67184762173860 2.0939953581492 1.63216946170257 1.74318416865406 2.20407294708735 1.80333728785313 2.04057162923907 2.63178005130503 2.16479038760332 1.86328252319168 0.266742424466464 0.267725655539573 0.276192228802963 0.273589157554137 0.260875206699811 0.269750312890186 0.258043407592638 0.259561437126561 0.264061474395097 0.272893376585103 0.252858248675538 0.251721236851497 0.252833849160892 0.255583885491157 0.260709857890446 0.251734063765179 0.251721236851497 0.255536399491642 0.255863383277221 5 5 + 24688321 24688953 24688544.4 24688240 24689094 + gene protein_coding_gene TRUE TRUE AT5G61360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07730.1) 0.614526090765922 6.02767731883368 0.000100830048277895 0.430846796291447 7.41659296530644 4.56036802251402 0.614526090765922 0.104127809042554 AT5G19830_at 4.72900574896533 4.28801256430922 4.90616588261403 4.46889696892395 5.13809411812 5.2223461861418 4.7651487596376 4.47535432538946 4.75013983464041 4.69302944386377 5.10461821098779 4.22703677604698 5.38658341871112 4.61641279132698 4.8606592077625 4.90151144989094 5.33410470175229 4.717806562384 4.87399123477985 0.249127529645934 0.248066364516574 0.244364666426441 0.249435863220769 0.251294737791518 0.250830884466249 0.252161615993703 0.242437280426384 0.268687586187987 0.246183407115732 0.250869344367266 0.244465766685718 0.249413098063667 0.244382651258544 0.248761748208309 0.247741794734331 0.243948149258186 0.271825056530816 0.242431088940438 5 0|5 /|+ 6704207 6705021 6704626.4 6703152 6705251 + gene protein_coding_gene TRUE TRUE AT5G19830.1 aminoacyl-tRNA hydrolase similar to peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G16140.2); similar to Chain A, Structure Of The Chloroplast Group Ii Intron Splicing Factor Crs2 (GB:1RYN); contains InterPro domain Peptidyl-tRNA hydrolase; (InterPro:IPR001328) -0.65148660241302 -6.02489041318267 0.000101221418306457 0.432417899005184 7.4134865696901 9.58211730807225 -0.65148660241302 0.119490243719152 AT5G54170_at 8.81492356480897 8.82820451122037 9.2250703210083 9.32422353695477 9.64733320586076 9.44974717838586 8.8222403867105 8.85391945447534 8.91667192263962 8.66614079861207 8.72042855060186 8.50843765010375 8.57999916603683 8.83066405322899 8.35213164000226 9.19868908417353 9.20398173929896 8.62982566503382 8.72116236571058 0.122405313557533 0.120755582850088 0.129190925024321 0.120755582850088 0.124447291693502 0.126798337336652 0.121671746407174 0.124174649357729 0.134942168917659 0.125817324764113 0.123302723204453 0.127636699234729 0.124076753503862 0.123970358205147 0.130812919023920 0.120755582850088 0.121958047776497 0.123801388839548 0.122527362482169 5 5 - 22002282 22002918 22002601.909 22002104 22004431 - gene protein_coding_gene TRUE TRUE AT5G54170.1 similar to CP5 [Arabidopsis thaliana] (TAIR:AT1G64720.1); similar to putative nodule membrane protein [Medicago sativa] (GB:AAL57201.1); contains InterPro domain Lipid-binding START; (InterPro:IPR002913) -0.498876564868034 -6.02252262064402 0.000101555209422666 0.433742299444207 7.41084627587054 17.8812134645352 -0.498876564868034 0.0387161401668023 AT5G16290_at 7.37171195380097 7.20540144507995 7.11393259036141 7.05285745053458 7.815918972393 7.70612611215467 7.52152053261553 7.87993157820164 6.33218139202911 6.97077188602087 7.93735435977175 7.85071793156713 7.774160191848 7.65582389510721 7.9305609372024 7.60860463070359 7.35710904846827 7.52019580941208 6.85515810791039 0.193718420136722 0.187494339959542 0.193240802605001 0.200397570744836 0.191487084547507 0.202773889346387 0.190738092284200 0.195374878882494 0.221717139009446 0.191700495109762 0.193888326141037 0.187494339959542 0.192414985227795 0.201222606274914 0.190342322718176 0.187494339959542 0.206367643808186 0.192307485270874 0.194816637235431 5 5|0 +|/ 5336313 5337360 5336771.222 5333767 5337748 + gene protein_coding_gene TRUE TRUE AT5G16290.1|AT5G16290.2 acetolactate synthase small subunit, putative similar to acetolactate synthase small subunit, putative [Arabidopsis thaliana] (TAIR:AT2G31810.1); similar to acetolactate synthase, small subunit, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX96859.1); contains InterPro domain Acetolactate synthase, small subunit; (InterPro:IPR004789); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) -0.546299272705525 -6.01776695903619 0.000102229187283157 0.436518629699082 7.40554036289513 14.6702682356411 -0.546299272705525 0.0717503727377366 AT5G65670_at 10.0020337211104 10.0734277530055 11.1118159067824 11.0597298624035 11.0353011352620 10.9614622090172 9.78161983217288 9.83606246414396 9.8666903954128 9.74372349690468 10.9991403556807 10.905625773575 10.9628050637338 10.9141169253750 11.0624862463026 10.7607679013707 10.8985741422790 10.9371431910111 9.86911268167564 0.0877056213458182 0.089559189804848 0.0859444914475545 0.0861417611183958 0.0826302663517132 0.0888548830688616 0.0850981780475609 0.0886751410459311 0.0913765398473627 0.08490217076058 0.0831191266226372 0.08320549610552 0.0831379215817264 0.0826302663517132 0.085508501595926 0.0826302663517132 0.0882771098541294 0.0860482290930914 0.0844138402958148 5 5|0 +|/ 26272115 26272496 26272327.875 26270884 26273694 + gene protein_coding_gene TRUE TRUE AT5G65670.1|AT5G65670.2 IAA9 (indoleacetic acid-induced protein 9); transcription factor auxin (indole-3-acetic acid) induced gene Identical to Auxin-responsive protein IAA9 (Indoleacetic acid-induced protein 9) (IAA9) [Arabidopsis Thaliana] (GB:Q38827;GB:Q8LBP2;GB:Q9FLH4); similar to IAA8 (indoleacetic acid-induced protein 8) [Arabidopsis thaliana] (TAIR:AT2G22670.3); similar to GH1 protein [Glycine max] (GB:AAB70005.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.483434532126347 6.0061128037266 0.000103901155597595 0.443554033246135 7.39252117337559 20.8609772644441 0.483434532126347 0.0220441015508751 AT5G54530_at 3.65622800722687 4.08596190113014 3.20823429435598 3.39619896694374 4.02924308818144 4.05946066787094 4.53096006252584 4.67808823484089 3.73319384538073 3.42504546101001 4.1504095316784 4.98021442872284 5.26350824920809 4.54482102342488 4.19006039893161 5.47033788707362 4.66282330867541 4.45133520001469 4.13008204678837 0.241113776743439 0.244128644062478 0.253950011323812 0.241113776743439 0.241113776743439 0.258019688835082 0.248181503558707 0.245284693985858 0.263467843045989 0.249300545863767 0.241113776743439 0.254716863908583 0.241113776743439 0.260169718347925 0.246231792536391 0.254970783384376 0.244207129606277 0.248833734338333 0.249317242900492 5 5 + 22170009 22170407 22170231 22169951 22171651 + gene protein_coding_gene TRUE TRUE AT5G54530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61667.1); similar to Os07g0548800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059929.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC57724.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) -0.571032810594376 -6.00549239282038 0.000103990979862306 0.443833502052323 7.39182743346249 8.1940281718141 -0.571032810594376 0.0852303862700298 AT5G40460_at 3.53671478355194 3.24457330675181 3.54459292314281 3.69768124806068 2.78946662463287 3.31030571835923 3.19928909542705 3.15105113123154 4.02956380683547 3.9216740393252 3.75099694693984 3.83323828689566 3.60213065859903 3.85304536579217 3.78523994312447 3.87669722886585 4.03536136178397 4.02759829070238 3.70300677969242 0.206598759338354 0.208055617194143 0.216060795437669 0.216759921859902 0.213352945874045 0.224468125399918 0.220836872604016 0.211905527612500 0.212076777753141 0.213585268901826 0.206598759338354 0.222081064076371 0.206598759338354 0.222701385842780 0.21318477310677 0.21377952246413 0.206974051863284 0.210391547719996 0.207881613050427 5 5 + 16219762 16220004 16219885.727 16219475 16220160 + gene protein_coding_gene TRUE TRUE AT5G40460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27630.1); similar to hypothetical protein MtrDRAFT_AC146560g4v1 [Medicago truncatula] (GB:ABE87926.1) -0.618953555711879 -6.004966793279 0.000104067142197342 0.44405449575606 7.39123965875677 7.17435271337255 -0.618953555711879 0.107012020048911 AT5G07590_at 3.83552110495278 3.69257157015014 3.00098350491401 3.1597064982539 3.37813811257415 3.61883415979561 3.24171737470507 3.41978834659999 4.15182130283946 4.13941617187025 4.86395082957104 5.6052198370081 4.02929080176878 4.63712775071528 5.08786666951841 4.00814758101512 4.12843425510366 4.41107365196044 3.67131257311946 0.199303953686662 0.191907184969109 0.208362295071935 0.202861112347143 0.192069908021304 0.202713441655611 0.199627775933447 0.192743406897139 0.20929382841197 0.201807016101434 0.197382282417790 0.204347867641888 0.200516003478621 0.203596999284015 0.191382286895843 0.195272375969825 0.197749417726512 0.191382286895843 0.195453534398379 5 5 - 2401725 2402579 2402050.182 2401582 2403878 - gene protein_coding_gene TRUE TRUE AT5G07590.1 WD-40 repeat protein family similar to WD-repeat protein [Capsella rubella] (GB:AAR15466.1); similar to WD-repeat protein [Brassica oleracea] (GB:AAR13700.1); similar to WD-repeat protein [Sisymbrium irio] (GB:AAR15437.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.531201393792687 -6.00448671530171 0.000104136760377620 0.444247419770925 7.3907027485979 7.71036038633937 -0.531201393792687 0.0636482293750258 AT5G64420_at 5.38541177290976 5.19246684794472 5.28379739566416 5.42112630804871 5.29283654977969 5.46466934577829 5.14300267522107 5.53953880431123 4.52262821335226 4.70424444186524 5.32139089931783 5.74247553045944 5.45093188641975 4.79200920314152 5.17232088425333 5.4448386666018 5.43198711887138 4.66174293579653 4.44568830850674 0.172944043031448 0.169556700283238 0.178529195150600 0.171711787275010 0.172929381011909 0.17718001683781 0.17021721549963 0.176658889237913 0.182546486845930 0.178746347689752 0.169556700283238 0.173342773116005 0.17032713692771 0.169556700283238 0.176563402255041 0.176821332613518 0.175967027273391 0.178594449497502 0.175210249782776 5 5 + 25777749 25778300 25778040.182 25773558 25778567 + gene protein_coding_gene TRUE TRUE AT5G64420.1 DNA polymerase V family similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT5G63740.1); similar to Os02g0135700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045819.1); similar to hypothetical protein CC1G_03896 [Coprinopsis cinerea okayama7#130] (GB:EAU88224.1); contains InterPro domain DNA polymerase V; (InterPro:IPR007015) -0.570562476542828 -5.99944676577934 0.000104870641391684 0.447273285535531 7.38506374718346 10.2452224433818 -0.570562476542828 0.085281785306757 AT5G38400_at 3.4568273674792 3.59484375032926 3.75250566663373 3.46558371989894 3.51219623023602 3.75429387462064 3.40948781208092 3.34465938332780 3.9999545316181 3.88872123503046 4.01007226065121 3.66679782664055 3.8813165899856 3.79470974182273 4.05511328827892 3.90009571894473 4.02153971299623 3.74035068559410 3.56216697348680 0.206736011377191 0.208410992973058 0.205526788863243 0.205175239709947 0.210726872510505 0.211852954586688 0.210474401665888 0.202223595111152 0.195217714319276 0.202628013058081 0.200237616590892 0.202989288669420 0.2026697434575 0.198023964545613 0.201712155920091 0.199438202025057 0.203864481343394 0.204257584488023 0.212618635286073 5 5 + 15393096 15393476 15393312.455 15393076 15393531 + gene protein_coding_gene TRUE TRUE AT5G38400.1 unknown protein -0.541669007360825 -5.99863810055615 0.000104988907845877 0.44767270305482 7.3841585525019 7.3866482546555 -0.541669007360825 0.070121681452024 AT5G25760_at 8.42267329858 8.68452985213429 9.26181237057604 9.4342677869865 9.73013550498343 9.66739490167121 8.22141523299054 8.60033180288385 8.25861163484947 7.25502247223254 9.60630395308421 9.59959213460352 9.44243413023986 9.48095472170962 9.27248275698315 9.57021083506307 9.32453307630317 9.27944186344926 7.71529884143627 0.177790980752049 0.159787763513244 0.171058518974755 0.162324067478062 0.164179938028616 0.170179406891417 0.170222827588090 0.158426554750067 0.173137770396789 0.19950891157791 0.159406379014257 0.158426554750067 0.165276148438907 0.166738372306824 0.165552624265915 0.163254090214259 0.170379662270247 0.168689556283417 0.191185513683289 5 0|5 /|+ 8968178 8969131 8968400.111 8967658 8969372 + gene protein_coding_gene TRUE TRUE AT5G25760.1|AT5G25760.2 PEX4 (PEROXIN4); ubiquitin-protein ligase mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to UBC10 (ubiquitin-conjugating enzyme 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to UBC29 (ubiquitin-conjugating enzyme 27), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G16740.1); similar to ubiquitin-conjugating enzyme E2 [Pavlova lutheri] (GB:AAN16047.1); similar to Os02g0634800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047515.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.571103693916605 5.99400783637089 0.000105668833805112 0.450466238511192 7.37897339004405 17.5978060105685 0.571103693916605 0.085801590539565 AT5G20250_at 10.6642354481217 10.8250598481604 11.5939834885401 11.5780257950563 12.3702246335951 12.2518862639179 9.46196290621966 9.4496528871906 11.8237061419645 11.1759674084808 11.8794324148585 10.9847092936348 11.4858156061847 11.8736880944505 11.1539514637671 12.1163591876608 11.3796462932122 11.835827391785 10.9959967906816 0.0868607135491519 0.0847438712148995 0.0913692660376826 0.0926192399831087 0.0888328523374396 0.0975361773797136 0.0876406621039508 0.0858458893360105 0.0931979164264545 0.0848279779204614 0.0907428689799759 0.0858904996656003 0.0869645216681557 0.0874032834859074 0.0860708508705204 0.0846872823150916 0.0919862607485389 0.0846872823150916 0.0881608730392483 5 5 + 6836098 6836556 6836320.636 6833672 6836790 + gene protein_coding_gene TRUE TRUE AT5G20250.1|AT5G20250.2|AT5G20250.3 DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. similar to ATSIP2 (ARABIDOPSIS THALIANA SEED IMBIBITION 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G57520.1); similar to ATSIP1 (ARABIDOPSIS THALIANA SEED IMBIBITION 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G55740.1); similar to putative alkaline alpha-galactosidase seed imbibition protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10122.1); similar to putative imbibition protein [Brassica oleracea] (GB:CAA55893.1); similar to alkaline alpha galactosidase 2 [Zea mays] (GB:AAQ07252.2); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111); contains InterPro domain Raffinose synthase; (InterPro:IPR008811) 0.492381799645438 5.99264877287231 0.000105869297505792 0.451214945969684 7.37745074658579 22.4846633248018 0.492381799645438 0.0347295496726209 AT5G62280_at 8.39594151183442 8.73457282032994 8.09013981481613 8.22301738748637 9.4258269128299 8.90768382324172 6.21728490358599 6.14363704736903 9.69921062378545 7.61210675454486 10.4503012291204 11.0682986046523 10.8886643261124 9.9798068325399 11.0440963446767 10.7239664690046 9.81240477571563 9.6548183274946 9.40534595871352 0.166963153103532 0.165698787713221 0.179419835991508 0.182765316918506 0.163232029254762 0.168587065529361 0.182944843162630 0.209522657653697 0.175812552189934 0.205004321565432 0.16401137381431 0.165655059495621 0.163187928777781 0.165282184040225 0.165146440734739 0.166348695805432 0.168936417316651 0.163290403741253 0.164842053745208 5 5 + 25034654 25035175 25034886.818 25034299 25035472 + gene protein_coding_gene TRUE TRUE AT5G62280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45360.1); similar to Os02g0455400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046773.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19988.1); contains InterPro domain Protein of unknown function DUF1442; (InterPro:IPR009902) 0.623262316250816 5.97139109087015 0.000109058377671135 0.464697747256706 7.3535926148944 17.6964375573596 0.623262316250816 0.110297592534885 AT5G44990_at 1.81159961604508 1.68710305895820 3.19259686112885 3.46759988828196 2.41377887372004 1.73582211404799 0.475258587913427 0.511784324928806 0.607218942015631 1.2323173520809 0.805220805802232 1.05982688845413 0.849636883859552 0.428845826036167 0.916940126512266 0.698850017234075 0.738808958598788 1.03579055573719 0.785899380111996 0.248517033466273 0.252909993576090 0.255818115121352 0.27023418279805 0.260997228071910 0.251526562839603 0.255471175344993 0.250484243372214 0.254202037975169 0.247991147543356 0.250026497009339 0.245044573418539 0.251349333697569 0.256823467851043 0.244539561284511 0.244539561284511 0.250754033845524 0.254551880887092 0.245634581826647 5 5|0 +|/ 18181233 18181869 18181634.4 18180597 18181995 + gene protein_coding_gene TRUE TRUE AT5G44990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABC75353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.668291459333314 5.96654000897379 0.000109800449275474 0.467749913913519 7.348137073494 2.75788553188578 0.668291459333314 0.128583872229709 AT5G62350_at 12.5441422234623 12.8044537725218 12.4073251877349 12.6011811081334 12.9823767641067 13.0973705156369 11.7371798580931 12.0212595020580 11.3348196957767 11.6991173246297 13.1529670135935 13.3128200531410 13.0398591700900 12.9382984713573 13.1818553602657 13.1598597822135 12.8441967893363 13.0352848472936 11.5636044157909 0.0692354462114208 0.06689156468879 0.0683570230232916 0.0656383922433906 0.0672973523832109 0.0686452211073975 0.0674327277623422 0.0673896751787912 0.0764363502054527 0.0720823678088102 0.0670774080748841 0.066753894386248 0.0672683670587074 0.0722728468556322 0.0721671345597325 0.0667002600545956 0.0677178984153477 0.068431149438666 0.0713086418651389 5 5 + 25054832 25055303 25055099.545 25054652 25055588 + gene protein_coding_gene TRUE TRUE AT5G62350.1 invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G47380.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.551461085425973 5.9635671165371 0.000110257882525497 0.46958832167609 7.34479172291672 24.8322393654570 0.551461085425973 0.0772504519895557 AT5G67020_at 2.78826940485716 3.16116171520272 2.83164091028982 3.29214293696764 3.07412195152806 3.22217202291826 2.44318455746603 2.44700112381198 2.87656099189182 2.09241351764250 4.39882323348492 4.26137232147026 4.46538918985525 4.42691175325877 3.21347225299835 4.4530161895865 4.15106080042185 4.9892595620983 2.54735040621825 0.244185635860956 0.241371060254352 0.249726161289477 0.242068450099003 0.248828089524152 0.242063495697276 0.244800627187141 0.243839841198653 0.252350217857341 0.249897663220266 0.240700211902184 0.245306494062405 0.241207754407578 0.244042448288356 0.247230740932447 0.249790489360273 0.247482111548 0.254400480453992 0.24477385408718 5 5 + 26767779 26768305 26768060.182 26767076 26768475 + gene protein_coding_gene TRUE TRUE AT5G67020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50340.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09363.1); contains domain DHS-like NAD/FAD-binding domain (SSF52467); contains domain Nucleotidyltransferase (SSF81301) 0.610478678425584 5.95243786797626 0.000111988508822492 0.476847070566172 7.33225446650874 6.30763922862069 0.610478678425584 0.10569719041083 AT5G19970_at 2.52614474748636 1.90920961192111 3.46382052657753 3.37594001131813 2.69354724446623 3.27367946911185 4.99256036880652 5.04549895562829 3.5618034033675 3.77047869041070 3.98470641226702 4.03302450467412 3.60152226741307 3.97796393311482 3.33464114770650 4.06141295292824 4.34529116087919 4.72465835644115 3.87931116446359 0.215795843850588 0.218244781268514 0.21141280608917 0.217669027852249 0.212841869983519 0.223236815037073 0.231062712818728 0.231569211873364 0.212671218436015 0.211517526521978 0.212492822771049 0.210760579545258 0.217419670592133 0.212562932406501 0.213815434109501 0.21923520615058 0.229952941159202 0.219911897997076 0.212144011454259 5 5 + 6748099 6748598 6748299.091 6747552 6748643 + gene protein_coding_gene TRUE TRUE AT5G19970.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68019.1); similar to Os01g0647000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043709.1) -0.716336211130813 -5.941977587347 0.000113641626049361 0.483772402092131 7.32045111084571 7.28260028925214 -0.716336211130813 0.147623625300520 AT5G52920_at 8.61504878460308 8.8248256403589 8.17410332756358 8.27030755865816 9.406236266346 9.10419682050517 9.59481653245485 9.30929307493417 8.22380007787682 8.71196296246152 9.86250607820695 9.98719458023072 9.15804931400798 9.42599273304994 9.8035365019735 8.94058765194974 8.93562392169678 8.78708987326803 8.76015604426163 0.165173200682437 0.160993390938197 0.170025552702135 0.165774955349034 0.165029842722874 0.167287398333657 0.165047202114025 0.163077565922359 0.192423517656226 0.161535816557123 0.173032124221633 0.163441182740393 0.164297706068379 0.171415503042575 0.163498922989393 0.163825343423336 0.170072186846035 0.177303615086415 0.164870954430614 5 5|0 +|/ 21482952 21483808 21483461.1 21480764 21484106 + gene protein_coding_gene TRUE TRUE AT5G52920.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT1G32440.1); similar to Pyruvate kinase isozyme G, chloroplast precursor (GB:Q40546); similar to Pyruvate kinase [Medicago truncatula] (GB:ABE87102.1); similar to Os10g0571200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065454.1); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) -0.557615261762014 -5.92610504054884 0.000116200146955477 0.49454782544251 7.30250406761115 17.8762929723436 -0.557615261762014 0.082271624115567 AT5G43670_at 5.47404578533619 5.72792042624011 6.45205345391496 6.85472721550005 6.94316713956096 7.37426060127233 4.45842790897361 5.17772645504865 3.39831589029416 3.35895943955911 4.77296112857754 4.78563108488701 5.42882240163963 5.21214460843809 5.5003626454779 5.33914078904166 5.38456416377412 5.32019871871674 3.67940116193554 0.238622565502350 0.225887293252511 0.230220455437462 0.236823575753668 0.226607350110482 0.225887293252511 0.225887293252511 0.227529141347549 0.232071643262348 0.237398868717060 0.228085599037500 0.228178298795391 0.227779652580641 0.231278695119186 0.239998283160382 0.225887293252511 0.238122352192574 0.233339460432180 0.230313561691218 5 5 - 17556353 17556821 17556583.909 17555988 17559161 - gene protein_coding_gene TRUE TRUE AT5G43670.1 transport protein, putative similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.2); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT1G05520.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT3G23660.1); similar to conserved hypothetical protein [Coprinopsis cinerea okayama7#130] (GB:EAU89573.1); similar to Vesicle coat complex COPII, subunit SEC23 (ISS) [Ostreococcus tauri] (GB:CAL55059.1); similar to hypothetical protein UM01624.1 [Ustilago maydis 521] (GB:XP_757771.1); contains InterPro domain Sec23/Sec24 beta-sandwich; (InterPro:IPR012990); contains InterPro domain Zinc finger, Sec23/Sec24-type; (InterPro:IPR006895); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Gelsolin region; (InterPro:IPR007123); contains InterPro domain Sec23/Sec24 helical region; (InterPro:IPR006900) 0.76515603032883 5.89942444786885 0.000120640707902647 0.513326212125763 7.27223711457412 10.4062263014802 0.76515603032883 0.166872661662847 AT5G23210_at 7.1797831704373 7.37400865993324 7.12368082810816 6.9970220998463 8.66732517439387 8.38343686340603 6.59323584233635 6.2925135877862 5.60950426254031 5.9949209816736 8.15789926360659 8.21904119258716 8.09903953008472 8.62270707357806 8.40124194820402 8.03246360201686 7.88988432091623 8.05756566288845 6.31977756994927 0.16258603429343 0.156092565836087 0.161584017316516 0.154665915268273 0.159129306798426 0.162246673575182 0.170626831305796 0.162880441777450 0.188002957482654 0.165049052587026 0.154665915268273 0.156371416509457 0.158068011157686 0.167530655409557 0.160163689887417 0.154665915268273 0.159140969639699 0.167052534481552 0.157914495141071 5 5|0 +|/ 7813848 7814782 7814296.3 7810686 7815042 + gene protein_coding_gene TRUE TRUE AT5G23210.1|AT5G23210.2|AT5G23210.3|AT5G23210.4 SCPL34; serine carboxypeptidase|SCPL34 similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to serine carboxypeptidase (carboxypeptidase D), putative [Musa acuminata] (GB:ABF70080.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)|similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563)|similar to SCPL35 (serine carboxypeptidase-like 35), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G08260.1); similar to Peptidase S10, serine carboxypeptidase [Medicago truncatula] (GB:ABE89060.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.554580375182728 5.89845660924387 0.000120805162951692 0.513905163196498 7.27113683802437 14.4062330760924 0.554580375182728 0.0820491603414207 AT5G46350_at 3.05581510082542 3.45410906519551 4.54683647412851 4.86063893675832 3.78543262490761 3.86185261318402 1.65239594221882 1.45956621476098 1.91280968487631 2.99907827642272 2.1605599027803 2.53614445598331 2.56579261099131 2.88216030402178 2.01597573792858 2.35205324888044 2.37051446561378 2.41261063967477 2.10572753447354 0.257987339722172 0.26877732467448 0.273327979124746 0.282720677017493 0.264412073373412 0.262321044778888 0.258334001736143 0.253684091902264 0.259527400892356 0.253684091902264 0.253684091902264 0.253684091902264 0.26037482050748 0.257922045073906 0.259964682229973 0.255912249836629 0.276010952675679 0.260874661665156 0.257714784002488 5 5 - 18818713 18819775 18818920.636 18818445 18821270 - gene protein_coding_gene TRUE TRUE AT5G46350.1 WRKY8 (WRKY DNA-binding protein 8); transcription factor member of WRKY Transcription Factor; Group II-c Identical to Probable WRKY transcription factor 8 (WRKY DNA-binding protein 8) (WRKY8) [Arabidopsis Thaliana] (GB:Q9FL26); similar to WRKY28 (WRKY DNA-binding protein 28), transcription factor [Arabidopsis thaliana] (TAIR:AT4G18170.1); similar to Os01g0626400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043628.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE87685.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.58033021148511 5.8944953391103 0.000121480764891628 0.516657693084093 7.26663180145267 5.7101716644933 0.58033021148511 0.094807012572839 AT5G09420_at 2.35550172990851 2.55863582800775 3.60045201500464 3.84146879744762 2.30299153946057 2.50763010343257 1.81546097227360 1.65487437667526 0.683656651783694 1.79580640608963 1.44326056537662 1.97217471450377 1.73954388875506 1.89637071148214 1.5878236134337 2.10041814835933 1.16516366330051 1.64866485345248 1.26720784015690 0.184194712704211 0.184194712704211 0.187402506924803 0.200613098643761 0.192833966486882 0.193409749845870 0.188659086470852 0.187339727155762 0.184713018473630 0.184194712704211 0.184194712704211 0.184194712704211 0.185429105680860 0.196941864856478 0.186588616906167 0.188494895716788 0.188252418460944 0.188502782507146 0.188878745308993 5 5|0 +|/ 2930678 2931675 2930995.375 2928317 2931950 + gene protein_coding_gene TRUE TRUE AT5G09420.1 chloroplast outer membrane translocon subunit, putative similar to chloroplast outer membrane translocon subunit, putative [Arabidopsis thaliana] (TAIR:AT3G17970.1); similar to chloroplast Toc64-1 [Physcomitrella patens] (GB:AAS47584.1); similar to Os02g0754500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048155.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Amidase; (InterPro:IPR000120); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.5332040315218 5.89332317505329 0.000121681453589523 0.517389540662653 7.26529820628234 4.05116082986449 0.5332040315218 0.070723600041222 AT5G59870_at 8.61693561276986 8.97676470453815 9.5082322312578 9.5646621539065 8.31968711188388 8.16436614167344 9.26833286667276 9.35082911409725 9.27650094609639 9.60891225794186 10.015572166842 10.5362149365132 9.55697159939356 9.9402947330745 10.6701787549705 9.93146117118227 9.34886457154842 9.48064879183453 9.19660795307295 0.119913381518979 0.113446437804951 0.114486364092914 0.112574377803699 0.127358639651271 0.128067668636814 0.115911487837624 0.113374277711495 0.120169071730838 0.110433658362213 0.115493032821123 0.112007996229449 0.112662709891712 0.118851285133406 0.118958755359307 0.111887981708339 0.125438567329588 0.115759043041854 0.110658780387347 5 5|0 -|/ 24132846 24133238 24132985.1 24132607 24133446 - gene protein_coding_gene TRUE TRUE AT5G59870.1 histone H2A, putative Identical to Probable histone H2A.7 (HTA6) [Arabidopsis Thaliana] (GB:Q9FJE8); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT5G02560.1); similar to HTA6-sGFP [Gateway adapted binary vector pCGTAG] (GB:ABD16410.1); similar to HTA6-EYFP [Gateway adapted binary vector pFYTAG] (GB:ABD16408.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.531624618988346 -5.88983708351294 0.000122280413047952 0.519814035866845 7.26133058482516 18.6190760219534 -0.531624618988346 0.0699944711341554 AT5G57030_at 8.84707632357846 9.02045164224475 9.02670365922803 8.97660108135226 9.45231656075822 8.75224854858635 10.0793336213492 9.81142786287973 9.35070500207785 9.6175036446979 10.0191137182814 10.4649382514991 9.66452836925839 9.90742593350823 10.3259595839221 10.0596218389073 9.17538757000112 9.91580768923955 9.41283271455365 0.144832164243094 0.13810406496796 0.147287893545746 0.155215417913964 0.137535484607368 0.15371804931158 0.142968687169876 0.142256561774857 0.166257488928772 0.134876288387897 0.141884828297115 0.140297351944216 0.139804558597259 0.140008541974984 0.143648068306117 0.142292294796941 0.159722633080466 0.139199132952555 0.134942128378083 5 5|0 +|/ 23096117 23096992 23096543.667 23094491 23097279 + gene protein_coding_gene TRUE TRUE AT5G57030.1 LUT2 (LUTEIN DEFICIENT 2); lycopene epsilon cyclase Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase Identical to Lycopene epsilon cyclase, chloroplast precursor (EC 1.14.-.-) [Arabidopsis Thaliana] (GB:Q38932;GB:Q9LDV8); similar to LYC (LYCOPENE CYCLASE), lycopene beta cyclase [Arabidopsis thaliana] (TAIR:AT3G10230.1); similar to putative lycopene epsilon cyclase [Daucus carota subsp. sativus] (GB:ABB52073.1); similar to lycopene epsilon cyclase (GB:AAB53336.1); similar to lycopene epsilon-cyclase [Citrus unshiu] (GB:BAE93359.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027); contains InterPro domain Lycopene cyclase, beta and epsilon; (InterPro:IPR010108); contains InterPro domain Lycopene beta and epsilon cyclase; (InterPro:IPR008671) -0.672169295760273 -5.8896637059169 0.000122310283946078 0.519818706770831 7.26113320315756 18.9467424073823 -0.672169295760273 0.133424807602621 AT5G13490_at 3.82400542914924 4.16414486453259 6.16357028114392 6.73457905981614 3.81969948473058 3.84142206752046 3.08525097070895 3.56430696381518 2.87093252269694 3.08201102944964 3.89492774504050 4.80643253488007 3.26625318923390 4.10443318820598 4.13663133324815 4.72147014296949 4.41952734331407 3.97694236813240 2.45359510149916 0.308610303608544 0.298193169191069 0.308813134161455 0.310906136831260 0.298193169191069 0.304549273177493 0.298193169191069 0.304312016139715 0.304967244967894 0.304877308789855 0.298193169191069 0.306152256101587 0.298193169191069 0.298193169191069 0.301454828808122 0.300989064693622 0.312744287332243 0.298193169191069 0.298486026164535 5 5|0 +|/ 4336733 4337331 4337035.9 4335470 4337683 + gene protein_coding_gene TRUE TRUE AT5G13490.1|AT5G13490.2 AAC2 (ADP/ATP CARRIER 2); ATP:ADP antiporter/ binding|AAC2 (ADP/ATP CARRIER 2); binding Encodes mitochondrial ADP/ATP carrier Identical to ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP translocase 2) (Adenine nucleotide translocator 2) (ANT 2) (ANT2) [Arabidopsis Thaliana] (GB:P40941;GB:Q9FY52); similar to AAC1 (ADP/ATP CARRIER 1), binding [Arabidopsis thaliana] (TAIR:AT3G08580.2); similar to ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) (GB:O22342); similar to nucleotide translocator (GB:1908224A); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.693773323896863 5.88454578694851 0.000123195565144029 0.52345795629698 7.25530433554401 7.88362578109879 0.693773323896863 0.141832246894527 AT5G60190_at 2.06566041977148 2.50637784315182 3.06879300853229 3.06965764443885 3.61863592236069 3.39776889234631 2.12211160553551 2.28832336135469 1.96199366741547 1.99795193583318 2.97716819671006 2.88532442451725 3.20055792200208 2.70112343066904 2.39331700376801 2.80240872380911 2.57050979258501 2.74546528883913 2.27761712360088 0.211897197639524 0.211897197639524 0.21540885677397 0.213474462769493 0.211897197639524 0.216751376246435 0.213875417556953 0.213770679839021 0.225238959191244 0.213333040455037 0.218533944214121 0.221864936204451 0.211897197639524 0.219707612811635 0.211897197639524 0.212823375923523 0.222074580612692 0.212412179348436 0.213623450602736 5 5 + 24252626 24253052 24252823.727 24251767 24253389 + gene protein_coding_gene TRUE TRUE AT5G60190.1 Ulp1 protease family protein similar to Peptidase C48, SUMO/Sentrin/Ubl1 [Medicago truncatula] (GB:ABE81567.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) 0.569271666203822 5.88441151441097 0.000123218883229867 0.52345795629698 7.25515134887917 5.19900204892594 0.569271666203822 0.090028549540672 AT5G24030_at 3.54555671969409 3.80620830920545 5.73075272316209 6.18607833789312 6.70699871937884 6.58268879892742 5.80152009254685 6.15125823612333 5.57888122812468 5.71702942495591 7.88170845978775 6.58299499705535 7.15210312381229 7.49026595898277 6.53080466800549 6.87229347153318 7.24972987952233 7.67116868223186 4.83085258045025 0.186183091787294 0.182742778664875 0.18440415850103 0.179431702963314 0.175600586723135 0.183992638352728 0.182294936783213 0.182256175070268 0.185642441285199 0.174619042723017 0.180263121769413 0.174146241868802 0.178223326248345 0.189642800817325 0.175871932806505 0.173951330530948 0.186709745893528 0.175735238821803 0.186305066607459 5 5|0 -|/ 8118679 8119368 8119041.889 8118320 8122787 - gene protein_coding_gene TRUE TRUE AT5G24030.1 C4-dicarboxylate transporter/malic acid transport family protein similar to C4-dicarboxylate transporter/malic acid transport family protein [Arabidopsis thaliana] (TAIR:AT4G27970.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81510.1); similar to Os01g0385400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043099.1); similar to Os05g0219900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054944.1); contains InterPro domain C4-dicarboxylate transporter/malic acid transport protein; (InterPro:IPR004695) 0.616281061634726 5.88373177347779 0.000123337001098120 0.523812243663715 7.25437682106895 11.8411184419297 0.616281061634726 0.111217803244888 AT5G60100_at 5.6102304414531 4.62041347574177 5.47545762127712 5.17370316098443 6.8380025315188 6.16657427855418 1.47957735247896 1.66614699270631 1.75311198892940 2.0113114876704 1.98051689504644 1.86679509618937 2.19588751822835 2.44351426116007 2.41784099654614 2.29680890173704 3.12652359006198 1.97441267382104 2.03963853678872 0.287566217561971 0.275142128409498 0.271984896545563 0.277342134852267 0.285072369580715 0.284298812404240 0.266575018443632 0.271097977228505 0.271907372002138 0.26618424533876 0.26618424533876 0.268968314085284 0.274289783673100 0.278236862345533 0.272313378325055 0.274355676998236 0.272272874596609 0.26618424533876 0.26618424533876 5 5|0 -|/ 24215580 24216238 24215948.8 24215441 24217728 - gene protein_coding_gene TRUE TRUE AT5G60100.1 APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator Encodes pseudo-response regulator 3 (APRR3). Identical to Two-component response regulator-like APRR3 (Pseudo-response regulator 3) (APRR3) [Arabidopsis Thaliana] (GB:Q9LVG4); similar to PRR7 (PSEUDO-RESPONSE REGULATOR 7), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G02810.1); similar to Response regulator receiver; CCT [Medicago truncatula] (GB:ABE85490.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.909246913249999 5.87945500575944 0.000124082953784335 0.526856221768286 7.24950181753004 6.74000064653682 0.909246913249999 0.215896877864309 AT5G27670_at 8.4469881886306 8.4161709323954 9.51616402717292 9.36198630866169 9.94032510356609 9.70832937471952 8.61685939460332 8.45714697891265 8.15811708290462 7.81661341463989 9.36377439558025 9.52317924335812 9.30521253556052 9.1550168690892 9.60732772058684 9.30668692396568 9.48740516137723 9.31903256136718 7.80787044613741 0.145437833615464 0.139247992303781 0.132421782175204 0.135406561066963 0.131558369072260 0.137130766064479 0.128481468801359 0.134855109387096 0.141831724365129 0.136837554893745 0.131783073586299 0.133996355123528 0.134525409407453 0.131464234988558 0.128481468801359 0.128481468801359 0.130665999930818 0.133712869469212 0.141922564709761 5 5|0 -|/ 9792822 9793332 9793017.667 9792564 9793458 - gene protein_coding_gene TRUE TRUE AT5G27670.1 histone H2A, putative Identical to Probable histone H2A.5 (HTA7) [Arabidopsis Thaliana] (GB:Q94F49); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT5G02560.1); similar to histone H2A [Brassica napus] (GB:CAB53509.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.508063465728801 5.87719446060711 0.000124479185263051 0.52841414144165 7.24692376999366 17.7134903257101 0.508063465728801 0.0558220125363086 AT5G59540_at 10.3159320646449 10.5082359506369 11.3532796771277 11.5079646725493 11.6395672916603 11.4930632619599 10.7181567771904 10.8390855745737 10.0495940968113 10.071918501031 11.1868111689291 11.0323136818151 11.4647453652557 11.3543915139937 10.9268912940070 11.4991688077714 11.6468923619332 11.3529381720251 9.93123041499681 0.0953385236762337 0.0895057633570507 0.0917594285679891 0.0955064669343664 0.0977346410829928 0.094632051416852 0.0915043479053715 0.0924587293709145 0.0992393278616457 0.096575583844739 0.0913685595522516 0.0933038184968168 0.092499635387123 0.0965936665933684 0.0944499654901556 0.0918206386334942 0.0954076959499374 0.0922266422875027 0.103358997769783 5 5 - 24013526 24014125 24013907.364 24013299 24014816 - gene protein_coding_gene TRUE TRUE AT5G59540.1|AT5G59540.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein|oxidoreductase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G59530.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding; (InterPro:IPR000194); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123)|similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G59530.1); similar to H+-transporting two-sector ATPase, alpha/beta subunit, central re (GB:ABE93406.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding; (InterPro:IPR000194); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.504942505518263 5.87256022631354 0.000125295716828715 0.531755022221065 7.24163583539217 21.7097106837909 0.504942505518263 0.0538963010628082 AT5G44610_at 3.33584108018913 3.22983038257284 3.23048715578471 3.40993634943646 2.98618313387554 3.24964117432317 3.15664386656292 3.37633728469064 3.82920395041866 3.34608578898645 3.64849826126641 3.50115224663031 3.59086116300914 3.52677182724525 3.31789780375815 3.18891334938889 3.58057794641385 3.45549155674252 3.0067187313169 0.170267402148848 0.171928269602635 0.167727527591079 0.171338215675753 0.171126025383574 0.173554674459701 0.168058430853586 0.182653866005329 0.169646625341322 0.172091328910192 0.173580311179084 0.167727527591079 0.170188853804081 0.174667935446866 0.175049024721010 0.174442622051299 0.173432069398086 0.168020781337576 0.177834362606958 5 5 - 18010984 18011416 18011148.273 18010792 18011903 - gene protein_coding_gene TRUE TRUE AT5G44610.1 DREPP plasma membrane polypeptide-related Encodes a protein of unknown function with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization. similar to DREPP plasma membrane polypeptide family protein [Arabidopsis thaliana] (TAIR:AT4G20260.3); similar to gene 11-1 protein precursor [Plasmodium falciparum 3D7] (GB:NP_700847.1); contains InterPro domain DREPP plasma membrane polypeptide; (InterPro:IPR008469) -0.528834822354262 -5.86903443303863 0.000125920781985064 0.534281877962627 7.23761017187362 6.68199922486983 -0.528834822354262 0.069462774967959 AT5G02830_at 7.63528446219818 7.88813203596483 8.49371810817025 8.42958687693612 8.41280163239219 8.16158445150293 8.83032398459446 8.70662435777 8.11006923396218 8.74204995980664 9.02627320714781 9.29044480974335 8.92655234593669 9.01073184467536 8.96518036400575 9.42383774458995 8.80673259586232 8.75322948684717 8.67231288580285 0.162522500283477 0.160830483907354 0.158615337900838 0.160491265274677 0.165375177724351 0.179497379751325 0.159349695108480 0.154322860476621 0.196614002063820 0.155913980051092 0.153557954482246 0.160788488379871 0.157552136719898 0.159959019052072 0.153276584168222 0.167083004525694 0.177711759801209 0.166812667125501 0.153276584168222 5 5 - 644470 645172 644787.111 644277 648451 - gene protein_coding_gene TRUE TRUE AT5G02830.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G09900.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17004.1); similar to Os03g0284900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049766.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.522699729330613 -5.86116131476963 0.000127328624874144 0.540128026716121 7.22861295931171 17.0865154018786 -0.522699729330613 0.0662273619015014 AT5G48175_at 3.12968632495537 3.10579666378002 3.5251137174027 3.83117580821163 2.92354219044986 3.11355121905917 3.21528968685708 3.37183152921451 3.63818221075892 3.45096881976293 3.02155089207106 3.55256173506295 3.33133572847020 3.50047076419842 3.01906240810978 3.20765526039399 3.55100694854462 3.84364508066096 3.35068589853515 0.203040743680513 0.203419304753605 0.207932353147096 0.233198139205343 0.203138982584979 0.213551771630329 0.210508513353664 0.210757950429312 0.208552608136942 0.208654116613387 0.208902393222298 0.213696773558214 0.204901605664208 0.220111948696363 0.213474758316244 0.209440654369444 0.228960681248901 0.207143343038966 0.211548339095207 5 5|0 +|/ 19556489 19556847 19556694.4 19556384 19557007 + gene protein_coding_gene TRUE TRUE AT5G48175.1 similar to PYK10 (phosphate starvation-response 3.1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G09260.1) -0.525667232984664 -5.85951951759754 0.000127624320560719 0.541254743498008 7.22673538025492 6.70617676509529 -0.525667232984664 0.068099483659591 AT5G64450_at 1.52689901879313 1.71911979968580 2.49579431471732 2.62073970235381 2.73829810425441 2.62841584289736 1.42162674821892 1.33681372514605 1.74592657305326 1.47641178150683 1.91446551811760 1.5369395722959 1.65061296606669 2.09778336440127 1.76252451863301 1.99974491722733 1.75133721650147 1.68556080746188 1.66208748232066 0.20890612056864 0.20728347556574 0.216257453215776 0.21238597742075 0.224494528688777 0.214998028853089 0.206936116200525 0.209054402079294 0.205757778092253 0.204498846896452 0.207923146330489 0.207500559935465 0.205383222753771 0.204080267037423 0.212940378612648 0.203818018090566 0.209713452054904 0.203726358517863 0.210899997497537 5 5|0 +|/ 25789198 25789953 25789625 25789175 25789987 + gene protein_coding_gene TRUE TRUE AT5G64450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) 0.493788045938925 5.85680483704023 0.000128114859728679 0.5432070052496 7.22362979963322 3.77496993486588 0.493788045938925 0.0463797924168142 AT5G37600_at 12.4843120343863 12.5045087091646 12.8756052418539 12.7967797750408 12.6817238278699 12.5189928084436 10.3849608218148 10.3109863722057 10.8788381296167 9.87037164591598 10.7646573027999 10.9543219216296 10.9328670856524 10.9406407252849 10.6258453681427 11.3267058225933 11.0250823865761 10.9723809408973 9.76577295201704 0.085473991704968 0.083701569286916 0.0881027926699416 0.0871979627597304 0.0847126189474887 0.0854029973664545 0.0848567104794323 0.0844595547734688 0.0847657683961391 0.086543528396085 0.083480159070397 0.083480159070397 0.0845671605858674 0.0846087879580487 0.0860026827509818 0.083480159070397 0.0845774143088516 0.083480159070397 0.0907726749771751 5 5 - 14950806 14951580 14951239.364 14950566 14953071 - gene protein_coding_gene TRUE TRUE AT5G37600.1 ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1); glutamate-ammonia ligase encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium Identical to Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2) (GLN1;1) (Glutamate--ammonia ligase GLN1;1) (GLN1-1) [Arabidopsis Thaliana] (GB:Q56WN1;GB:Q9FHR0); similar to ATGSKB6 (Arabidopsis thaliana glutamine synthase clone KB6), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT3G17820.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to GLN1,4 (Glutamine synthetase 1,4), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G16570.1); similar to glutamate--ammonia ligase [Brassica napus] (GB:CAA58118.1); similar to glutamine synthetase [Raphanus sativus] (GB:BAA04996.1); similar to Gln synthetase (GB:1804333B); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) 0.479647591139612 5.84600175929806 0.000130087027816493 0.551438910914113 7.21125829760605 22.6269705005376 0.479647591139612 0.0339888187551545 AT5G42880_at 3.02790465221371 2.88433959298193 3.23450942145233 3.14058470014894 2.47394980254769 2.65688273345343 2.97528545579065 2.65416126755424 3.82731335716549 3.51510570998272 3.67022171570365 3.73866598595038 3.59419789642382 3.44152131458166 3.5334996314852 2.97627822041599 3.37494968710708 3.82182680511617 3.35834085964561 0.199032187669682 0.186060351859235 0.189533096019761 0.187726573411754 0.189406580865366 0.197525964604306 0.187504856746351 0.192706680387144 0.188631299456494 0.186957952655652 0.200928286483958 0.187930186453426 0.186060351859235 0.189960036033532 0.191323956419055 0.1909838152564 0.201356809606797 0.191827611296359 0.202356462042646 5 5 + 17210725 17211289 17211016.727 17208986 17211319 + gene protein_coding_gene TRUE TRUE AT5G42880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G26570.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45545.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE88908.1); contains InterPro domain Protein of unknown function DUF827, plant; (InterPro:IPR008545) -0.528303207120513 -5.84319640352855 0.000130604454438505 0.553501677910383 7.20804229450617 6.42385976961583 -0.528303207120513 0.0705116491062942 AT5G59150_at 6.6933311515122 6.83728733129548 7.33854496824204 7.5210774552429 7.59312370274056 7.41401430152316 7.08360386108605 7.3750716348794 7.67840700526498 7.10135524324035 8.06456638696501 7.77958716721655 7.8565722670847 7.92039243022445 8.03493036477234 7.77463303184975 7.49983892291461 7.9521508061367 7.4464304169903 0.138797057693569 0.132353286124134 0.133509717211708 0.130368744460285 0.128020693100564 0.132800525804478 0.133607871137075 0.129935630914747 0.146794209613834 0.131166238170216 0.128020693100564 0.128020693100564 0.128020693100564 0.139970539306014 0.137316061405718 0.132289364340131 0.134434861763515 0.131581526582562 0.132809279503067 5 5 + 23895032 23895444 23895264.7 23893820 23895655 + gene protein_coding_gene TRUE TRUE AT5G59150.1 AtRABA2d (Arabidopsis Rab GTPase homolog A2d); GTP binding similar to AtRABA2c/AtRab11A (Arabidopsis Rab GTPase homolog A2c), GTP binding [Arabidopsis thaliana] (TAIR:AT3G46830.1); similar to Ras-related protein Rab11C (GB:Q40193); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) -0.530037585310069 -5.84195633064745 0.000130833877384167 0.554343138476714 7.20662025874324 14.8665392061372 -0.530037585310069 0.0715775368052265 AT5G18270_at 1.74472973724654 2.14795985848561 3.75583580275665 3.55484446775870 2.02501169340806 2.08186760009053 1.37739859333502 1.01176395030089 1.33007947617910 1.54159353629112 1.66118371490803 1.62948050791912 1.76170044486305 1.69039179394205 1.54059610611630 1.68264238239898 1.67359469318082 1.44871126062341 1.47164788336881 0.222717014251748 0.228033331053987 0.247975048433202 0.257903725279846 0.228618821668161 0.229671743503449 0.226886817786657 0.218314934407373 0.223327931407811 0.225348370397636 0.222351234153807 0.220436834903835 0.220925612191685 0.225500628252491 0.233403453708371 0.218168366440409 0.224242076420724 0.230236315366161 0.223188399058984 5 5 - 6041245 6042027 6041520.091 6040921 6042940 - gene protein_coding_gene TRUE TRUE AT5G18270.1|AT5G18270.2 ANAC087; transcription factor|ANAC087 similar to ANAC046 (Arabidopsis NAC domain containing protein 46), transcription factor [Arabidopsis thaliana] (TAIR:AT3G04060.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.585604831937201 5.81452225050361 0.000136021169714459 0.576185674910449 7.17509137037139 3.75433208539290 0.585604831937201 0.100894480485497 AT5G14100_at 3.29462680342170 3.28481002335692 3.72402361489877 3.46309384554042 3.29053783444066 3.42809953317300 3.65321868451234 3.77746282631684 3.63792282320846 3.43424312283303 3.82368652803365 4.45336853836792 4.19650981534352 3.69879393627751 3.89670146331202 4.10844801773613 3.41930838488193 3.8805836416865 3.81543367104601 0.231866821489471 0.235039240431526 0.233296866870003 0.228556009349431 0.225900448785453 0.237222335564607 0.223018739311099 0.230328181781807 0.22541228361896 0.219661492763121 0.223442592206121 0.223467334177967 0.220642244667952 0.222676688382244 0.230173305934516 0.221935959319528 0.225054391316121 0.230823646600022 0.234102013728954 5 5|0 -|/ 4549763 4550917 4550559.1 4549440 4551845 - gene protein_coding_gene TRUE TRUE AT5G14100.1 ATNAP14 (Non-intrinsic ABC protein 14) member of NAP subfamily Identical to Non-intrinsic ABC protein 14, chloroplast precursor (NAP14) [Arabidopsis Thaliana] (GB:Q8LEF6;GB:Q9FMU0); similar to ATNAP13 (EMBRYO DEFECTIVE 2751) [Arabidopsis thaliana] (TAIR:AT4G33460.1); similar to ABC transporter family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93815.2); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.50188467939136 -5.81237139985728 0.000136437049203852 0.577810903378312 7.17261387813331 7.27142160224128 -0.50188467939136 0.0554154815008687 AT5G57340_at 9.03921294239083 9.09014483899842 10.2446699450238 10.2491747700958 10.8919180786391 10.5885165720520 9.36169963298624 9.46560701374789 9.09404362514534 9.47757333377005 10.4792271468224 9.92812950012734 10.5791947262553 10.6733227768357 9.99983499757056 10.6464131515266 10.7654834985165 10.8081218114517 9.57780029193562 0.0920485344947137 0.0919992177948235 0.0914666085710648 0.0886023775177805 0.0903173621287223 0.0906385489195619 0.0938286011846647 0.0911006047286908 0.102064606735440 0.0895844894135587 0.0900057851114708 0.0905723431240605 0.0900299089501647 0.0884950576359011 0.0884950576359011 0.0886345412885761 0.0918309952819164 0.0908905429418635 0.090595295258174 5 5 + 23245934 23246296 23246124.818 23243312 23246508 + gene protein_coding_gene TRUE TRUE AT5G57340.1|AT5G57340.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67390.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83997.1) 0.502781507826991 5.80987831320866 0.000136920803382226 0.579722681520346 7.16974115508309 19.8004204916194 0.502781507826991 0.0561997703844512 AT5G53110_at 4.05069828864727 4.3726869888703 4.98571283185024 5.35637170042663 4.79871499693997 4.43677939582408 1.3703037404364 1.51446625056453 1.92917297006767 1.38704401218463 1.09648712333383 1.80682104030257 1.47047978989900 1.66246659813897 1.10798121890917 1.34789551094249 1.32656711389523 1.83187161193256 1.62592977865965 0.286513219434808 0.298604254380045 0.310841408913219 0.311147756205812 0.299046001694501 0.299223669158126 0.283535003953748 0.29731851877915 0.283248478466755 0.288023207033971 0.288847494025216 0.287234034219169 0.284975308669035 0.287510955399759 0.284381349278794 0.286275043463668 0.297051145117210 0.285664746779147 0.284739449373652 5 5 + 21546378 21546810 21546640.091 21546248 21546970 + gene protein_coding_gene TRUE TRUE AT5G53110.1 similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G46495.1); similar to unnamed protein product; gb|AAF25996.1 gene_id:MFH8.3 similar to unknown protein, putative [Medicago truncatula] (GB:ABE89187.1) 0.601555147148444 5.80390742421714 0.000138086853192270 0.58452164956288 7.16285658849719 5.4125685264732 0.601555147148444 0.108466064669329 AT5G61900_at 7.5341756293423 6.898859338003 9.48512691819184 9.64354734092367 8.65991858808915 8.22145152572305 5.20307477108135 4.23574548461142 5.88937375403474 5.6430518956187 6.29352172823433 6.3300220800215 5.95455923457386 6.7653316114926 6.38988257985654 6.82896655096631 6.72397642153576 6.7239467335813 5.44276201814007 0.217233312705879 0.218096298568186 0.233177156269281 0.22945023108682 0.227070735256031 0.228481768642556 0.220169260720733 0.223245076618655 0.228452846818902 0.224741053711653 0.21607847576065 0.219671860050934 0.217783791270924 0.224135909898631 0.21607847576065 0.221226171383356 0.223459451622319 0.217052664924538 0.219458124469896 5 5|0 -|/ 24873170 24874064 24873609 24872887 24876559 - gene protein_coding_gene TRUE TRUE AT5G61900.1|AT5G61900.3 BON1 (BONZAI1); calcium-dependent phospholipid binding Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response. similar to BON2 (BONZAI 2) [Arabidopsis thaliana] (TAIR:AT5G07300.1); similar to BON3 (BONZAI 3) [Arabidopsis thaliana] (TAIR:AT1G08860.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT58837.1); similar to Os02g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046976.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.89716928083632 5.80096535851359 0.000138665305884172 0.586831574501815 7.15946200891864 13.5650733278944 0.89716928083632 0.215916686989338 AT5G27380_at 10.3236106451789 10.2352421460322 10.8448551120858 10.7817660342817 10.9527806522806 10.8286627301241 9.30535622998083 9.0836216277123 9.4099606675023 9.61806736633821 10.7424136094363 10.7379071430535 10.5386725413146 10.6750327584848 10.5708783662175 10.7406744600656 10.6823524059292 10.6257871711781 9.47411670822646 0.0930364366332775 0.0884351135770228 0.092746106898785 0.0896824465975557 0.0897555954345984 0.0912905754837864 0.0888629062573158 0.0994117149877655 0.0999799700407705 0.0995918094243689 0.0901319482769809 0.0905996508681139 0.0930887850409906 0.0911207082072415 0.0917505892212856 0.0885701395257093 0.089678411817418 0.0927052846704597 0.0957436075068558 5 5 - 9668236 9669007 9668684.455 9667974 9670965 - gene protein_coding_gene TRUE TRUE AT5G27380.1 GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. Identical to Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) (GSH2) [Arabidopsis Thaliana] (GB:P46416;GB:Q8H171;GB:Q9SMW4;GB:Q9SMW5); similar to Glutathione synthetase, chloroplast precursor (Glutathione synthase) (GSH synthetase) (GSH-S) (GB:P46416); similar to Glutathione synthetase, chloroplast precursor (Glutathione synthase) (GSH synthetase) (GSH-S) (GB:O23732); similar to glutathione synthetase GSHS1 [Medicago truncatula] (GB:AAK93946.1); contains InterPro domain Eukaryotic glutathione synthase, ATP-binding; (InterPro:IPR005615); contains InterPro domain Eukaryotic glutathione synthase; (InterPro:IPR004887) 0.490511051151123 5.79704624688967 0.000139439885946681 0.589970157440408 7.15493773319938 20.3769517577007 0.490511051151123 0.047820961450831 AT5G10910_at 4.70884386522544 5.33761991287833 5.6688068615487 5.51162925773526 5.0447970190941 5.40621852678463 5.93679768357839 5.48611319232658 5.20848793294203 4.46929712582895 5.00153317336891 5.76770860829176 4.96502971582275 4.68381692568090 5.56927384733518 6.00076015530198 5.59731652097735 4.79537637891953 4.83901666457758 0.223652593605998 0.225926950402082 0.223093633614094 0.224918307473751 0.217052023770068 0.220966385878427 0.221616222086813 0.224752298132158 0.229898583910297 0.221221286870523 0.21695437658688 0.217046824758852 0.221665717094212 0.223598602384512 0.226059113479127 0.223042991155405 0.220143840556128 0.225984359264281 0.222263231245069 5 5 + 3440733 3441433 3441089.455 3439554 3441583 + gene protein_coding_gene TRUE TRUE AT5G10910.1 mraW methylase family protein similar to Os02g0137600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045831.1); similar to Putative SAM dependent methyltransferases (ISS) [Ostreococcus tauri] (GB:CAL55102.1); contains InterPro domain Bacterial methyltransferase; (InterPro:IPR002903) -0.705869697449627 -5.79648760473175 0.00013955067297663 0.590299346691145 7.15429260835469 10.455871201644 -0.705869697449627 0.150249536729435 AT5G23320_at 1.91356894584841 1.97117651710779 2.82678875749122 3.24299066164942 3.85337376401068 2.98723356114075 1.88993073376540 1.85364256446658 1.64489927515919 1.96664314000052 2.43481287937332 2.16792631529535 2.41713410033824 2.85892862698755 2.23253743617744 2.15068614560095 2.56143220039392 2.24277983229457 1.60250913706453 0.205901171491079 0.207339451005988 0.212390064482038 0.221527970799914 0.204979238172751 0.218071326257516 0.202659030484221 0.203229319128291 0.211854133288993 0.210166247096971 0.203657431366598 0.201824435090113 0.209742455293624 0.203751739834249 0.206722803908680 0.200514606379050 0.211212591119454 0.205761462237497 0.201497276530867 5 5 + 7853414 7853936 7853651.909 7853371 7853964 + gene protein_coding_gene TRUE TRUE AT5G23320.1 ATSTE14 (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE 14A); protein-S-isoprenylcysteine O-methyltransferase Encodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. similar to ATSTE14B (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE), protein-S-isoprenylcysteine O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G08335.1); similar to OSJNBa0041A02.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE01825.2); similar to PREDICTED: similar to Protein-S-isoprenylcysteine O-methyltransferase (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT) isoform 1 [Canis familiaris] (GB:XP_546748.1); similar to Os04g0602900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053777.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) 0.749992603098027 5.78596439943012 0.000141655252272557 0.599060061860646 7.14213002445545 4.62798662625124 0.749992603098027 0.166713568178017 AT5G23730_at 5.1924504988859 5.65057165970966 6.32747709028996 6.57027540561134 5.47119157686324 6.35819204983108 6.8997067410825 7.3018374804223 6.2885297538496 6.60616827575882 7.14369026518196 6.97539551332264 7.18548079489998 7.08151184212376 6.43274820772416 7.66689445277274 7.60301205649254 6.95801454642723 6.89988876306646 0.188766146367555 0.17945452306944 0.183461435879993 0.180748004062110 0.182737437376295 0.178088331643068 0.180989419095547 0.189170755634965 0.191959928699121 0.182540050253883 0.178088331643068 0.178088331643068 0.184933390759931 0.18683719424263 0.184015474115454 0.184768059860933 0.178088331643068 0.179123217822940 0.185462807115290 5 5 + 8005803 8006316 8005996.818 8005237 8006633 + gene protein_coding_gene TRUE TRUE AT5G23730.1 nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G52250.1); similar to putative COP1 [Oryza sativa (japonica cultivar-group)] (GB:BAD07933.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.819492127190718 -5.78359399585756 0.000142133984022061 0.600942484445273 7.13938764401715 13.0859823415502 -0.819492127190718 0.190933884926036 AT5G17630_at 6.28774634395963 6.4394332621633 6.5902452596876 6.5434154715948 6.58844426319701 6.85669583124901 6.97023673757885 7.91865192815631 7.48802777123391 7.07515787244667 8.0428587935021 8.45389241546183 7.93108391599017 7.9982796265904 7.97814553097372 8.09135411366406 7.63733318178827 7.7452040099897 7.09805975690233 0.185531869794312 0.196521907198183 0.190695242557393 0.184723374283398 0.188804311429544 0.197181665407531 0.181153268333633 0.180376267086942 0.198208669212767 0.193512609937015 0.177611112410868 0.182192725767594 0.178092586326232 0.183999062111712 0.186313316716428 0.176037992507928 0.194638687005782 0.175434243621282 0.175434243621282 5 5 + 5810143 5810654 5810460.818 5809336 5810964 + gene protein_coding_gene TRUE TRUE AT5G17630.1 glucose-6-phosphate/phosphate translocator, putative similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter (ISS) [Ostreococcus tauri] (GB:CAL52819.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) -0.765946472198282 -5.7770445304004 0.000143465738432582 0.606429676354522 7.13180523924714 14.3769506782096 -0.765946472198282 0.172764747157601 AT5G37660_at 0.628362132226653 0.840492372043792 1.86474772384002 0.96697749301161 0.9494295762432 1.07900638465335 1.08822913472634 0.836797808406936 0.903434152959998 0.71234359725239 1.90048552368879 2.44652905389266 1.78000212180108 1.98994943878885 2.827363072492 2.16349007603335 1.9227419438712 1.99663749226902 0.880491052832126 0.231820789974079 0.235479465211951 0.230295759709646 0.239948447485504 0.233074300740835 0.233847259574305 0.231939660917517 0.234487574934770 0.240484037806975 0.237040393375152 0.243279581859073 0.237078988224982 0.244944367274051 0.238726454006907 0.261100514018434 0.239852625229806 0.23321941423701 0.233327489529085 0.233041502912185 5 5 + 14977245 14977787 14977475.727 14977027 14978824 + gene protein_coding_gene TRUE TRUE AT5G37660.1|AT5G37660.2 receptor-like protein kinase-related similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G01660.1); similar to Os04g0537800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053427.1); similar to receptor-like protein kinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25786.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 0.74870105605349 5.77028749795343 0.000144853684010762 0.61215166862948 7.12397458571358 2.51200004882872 0.74870105605349 0.166977438924047 AT5G61250_at 6.04773290248609 6.02264714665685 7.0772560232364 7.26329509298085 7.77003877302173 6.2605618569993 2.00632654769115 2.34780057732945 3.60139264335389 2.46466740033452 3.38150746966429 3.94280123698279 3.88618017487243 4.21542929241576 2.91603956494766 4.18024527264048 3.52488433608908 3.95618736442318 2.73445181518724 0.246953558400425 0.225259086453599 0.230130227972321 0.237382773215085 0.246240445293121 0.239010233994812 0.243023292666455 0.246475166955207 0.229121130844443 0.226906420324066 0.225941551163542 0.224063710255262 0.243254768579723 0.226949624631393 0.233026488036853 0.228111643999429 0.256329518754697 0.229756570940275 0.228742170878462 5 5|0 -|/ 24649535 24650224 24649800 24649380 24652529 - gene protein_coding_gene TRUE TRUE AT5G61250.1|AT5G61250.2 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 2 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q8L608;GB:Q9FLK8); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07830.1); similar to Os03g0211700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049350.1); similar to putative heparanase [Hordeum vulgare subsp. vulgare] (GB:CAD42650.1); similar to Os12g0578400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067122.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 1.06068372611774 5.7684638126534 0.000145230736588702 0.613599862087266 7.1218597527505 8.94141401103173 1.06068372611774 0.269785777239598 AT5G55680_at 3.24358732925468 3.51144002649998 4.25378684676514 3.6552134928095 3.5543657228329 3.66029139982648 3.55255302572893 3.70617411690189 3.97786381782850 4.25438018010805 4.12586442856946 3.79884849302232 3.7777776163932 3.84257249266016 3.56721801976635 3.94658553145203 4.56175079636757 4.07342118326161 4.00345001434407 0.17663707817784 0.172168837452332 0.178310798469029 0.174274774105344 0.183427187339855 0.175924346857343 0.175626641588089 0.180262940187249 0.175755637781736 0.172449776514382 0.174658358818187 0.178095815764381 0.175444666112509 0.175008403843646 0.174868692354690 0.171093063760703 0.172930853941136 0.184495161209848 0.1763152629362 5 5 - 22565008 22565526 22565267.364 22564961 22565587 - gene protein_coding_gene TRUE TRUE AT5G55680.1 glycine-rich protein similar to PREDICTED: hypothetical protein, partial [Gallus gallus] (GB:XP_001236310.1) -0.619927766466251 -5.76636412759585 0.000145666152167104 0.615293826753848 7.11942412883393 7.66233624055083 -0.619927766466251 0.117989123639711 AT5G41350_at 8.47815682255465 8.476944231405 9.58412340835272 9.69613393030888 10.1158376715351 9.75726023425377 8.34877365184344 8.11067195794191 7.52007755906448 6.98781907339516 8.65483322432138 8.34790907505154 8.6108078291301 8.62988453595173 8.0867541082172 8.7728308295518 8.60527877176946 8.55838859255807 7.13042431581935 0.193034588956490 0.188949817607645 0.193365954928664 0.192589154570773 0.191904721424682 0.193745145639329 0.203464598697683 0.194477588655703 0.205866901095401 0.203713377651464 0.188949817607645 0.188949817607645 0.191579916419781 0.197158654241915 0.204663091483367 0.188949817607645 0.199026946907102 0.198257777635854 0.206503531686875 5 0|5 /|- 16559254 16560042 16559778.7 16558692 16561200 - gene protein_coding_gene TRUE TRUE AT5G41350.1 zinc finger (C3HC4-type RING finger) family protein similar to RHB1A (RING-H2 finger B1A), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G00335.2); similar to Os10g0142100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064147.1); similar to Os11g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067717.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65911.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.532448170702208 5.76349038373322 0.000146264348067506 0.617674341889076 7.1160893367446 16.9440424986471 0.532448170702208 0.0769690694705156 AT5G20380_at 9.43788818483746 9.43635130585887 10.0861678590800 10.0970294938675 10.0888819419262 9.89129431010525 10.2742533118855 10.3246840284369 9.74915799869504 9.92175185707124 10.1210820726182 9.71727916061071 10.2532910890622 10.227358954451 9.67475659214967 10.1947185179122 10.3435909790811 9.9186224126865 9.82920498198707 0.0769634803213 0.0743491983810993 0.0742785022517007 0.0764598485213224 0.0737918208055583 0.0855576230312855 0.0742020968369565 0.0744648153296321 0.0872987581796487 0.0790895910515814 0.0761860246340161 0.0746221127224904 0.0778572862241433 0.0793649028695854 0.074327461962498 0.073912235839404 0.077284114782856 0.0776027435606952 0.0737918208055583 5 5|0 -|/ 6888008 6890578 6888784.143 6887727 6892434 - gene protein_coding_gene TRUE TRUE AT5G20380.1 transporter-related similar to ANTR2 (anion transporter 2), organic anion transporter [Arabidopsis thaliana] (TAIR:AT4G00370.1); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE87274.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.472826719732079 -5.74776205040874 0.000149585175133612 0.63154860941411 7.09781174779046 19.8994233469527 -0.472826719732079 0.0353406548920729 AT5G64780_at 5.17768959483416 5.45478793898576 6.07887449803464 6.05586040874806 6.14953507874233 5.88866033005602 5.41945883761362 5.47106005324765 5.13247289195682 4.8180881784532 5.0580934531563 5.98578738320403 5.8579582094192 5.28701015723961 5.95168677470116 5.57564819659862 5.14948292826454 5.26703863788816 5.73676459578907 0.240400889950028 0.233858193396983 0.254776742576502 0.236141342022641 0.230404622815992 0.242887448675092 0.235419680538538 0.230570060599406 0.257132437043604 0.262823614130630 0.234862113226477 0.230404622815992 0.235009057250467 0.24564093935669 0.237453293862573 0.230404622815992 0.239092213475441 0.238741261496945 0.237494965694731 5 5 - 25917942 25919143 25918520.273 25917785 25919351 - gene protein_coding_gene TRUE TRUE AT5G64780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09830.1); similar to hypothetical protein MtrDRAFT_AC141113g10v1 [Medicago truncatula] (GB:ABE94618.1) -0.512756438326405 -5.74322964930127 0.000150557013837102 0.635501155406409 7.0925366046175 11.0848392290121 -0.512756438326405 0.0665825340905791 AT5G49820_at 7.3708326045743 7.38516396384915 7.11522819757796 7.40254631070474 7.8506123928862 7.86196572203969 7.64644437445285 7.48570971186293 7.07699606660242 7.00449949224777 8.38814087964807 8.57740569775425 7.86603381156826 8.03859417666425 8.27058506607204 7.91713013028375 7.51561684991069 8.09620890435165 7.58635470176932 0.173053802521811 0.170616421204330 0.176835771338758 0.178019563257601 0.165904794044903 0.173277313600954 0.174162983440521 0.173166912924723 0.183953734373628 0.164481650242935 0.175528685860781 0.174158606607873 0.170803197546593 0.180729481186466 0.17261274114657 0.171996010370418 0.181112572488095 0.166401403705699 0.164481650242935 5 5|0 -|/ 20263999 20265103 20264366 20263726 20266771 - gene protein_coding_gene TRUE TRUE AT5G49820.1 EMB1879 (EMBRYO DEFECTIVE 1879) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31190.1); similar to Protein of unknown function DUF647 [Medicago truncatula] (GB:ABE91893.1); contains InterPro domain Protein of unknown function DUF647; (InterPro:IPR006968) -0.498043274984381 -5.741004881877 0.000151036515134991 0.637374093869664 7.08994592467479 15.1679785062792 -0.498043274984381 0.0570612468383494 AT5G60710_at 5.94849454929867 6.34984897333066 6.09778581797636 6.2842866681153 7.77859559543259 7.01125937854004 4.24344656413972 4.38890554950297 5.20841470330643 4.89892215075996 7.4981021469921 7.0588974054301 7.04300983407545 7.13128903921887 7.03163936900282 6.74549643071177 6.41728999362703 6.66208706163568 4.9655353559946 0.223568018996330 0.219247367626214 0.226873934050436 0.225835937277209 0.225977143823756 0.233532321181006 0.229928505576778 0.231209065251424 0.247188508724686 0.222307842663514 0.234456720722735 0.232952792868311 0.226575400249259 0.227639818727200 0.227798360772570 0.224243869255411 0.233038177792194 0.237860632601643 0.228954923409139 5 5 - 24428181 24428543 24428345.545 24427944 24432294 - gene protein_coding_gene TRUE TRUE AT5G60710.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G54780.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G38970.1); similar to Os02g0806700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048450.1); similar to Hypothetical protein protein containing a von Willebrand factor type A domain [Oryza sativa] (GB:AAK98695.1); similar to Os02g0619600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047451.1); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.712857892065884 5.74097083857091 0.000151043865106055 0.637374093869664 7.08990627537855 11.9992114604289 0.712857892065884 0.155347878768645 AT5G24420_at 5.30765012603062 5.85942568342022 3.54372398700752 3.39373843285511 4.95902875701464 4.56426729146585 6.77720240850559 6.47188394154829 2.93211717121276 4.53665911886 4.56891777612208 7.02482210117001 6.51367180669955 6.4124359815153 5.37314141762892 7.49780039271356 5.67414760378859 4.43427060379687 2.79241560653883 0.247891916818402 0.231615724698477 0.235363179136662 0.239819014150213 0.231042847031648 0.231042847031648 0.2354107736032 0.241289431727873 0.263050887694954 0.24572627717896 0.23221363470776 0.239346161742691 0.232891657616415 0.239536636272291 0.233626713982335 0.235804722956064 0.241363238010715 0.235676298027353 0.240089077242435 5 5|0 -|/ 8336992 8337510 8337206.4 8336617 8338011 - gene protein_coding_gene TRUE TRUE AT5G24420.1 glucosamine/galactosamine-6-phosphate isomerase-related similar to glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G49360.1); similar to putative 6-phosphogluconolactonase [Brassica carinata] (GB:AAK50346.1); contains InterPro domain 6-phosphogluconolactonase; (InterPro:IPR005900); contains InterPro domain Glucosamine/galactosamine-6-phosphate isomerase; (InterPro:IPR006148) -0.64860858639315 -5.72929700109746 0.000153586926318010 0.647829655209364 7.07629797120613 9.78851420813092 -0.64860858639315 0.131340157537174 AT5G64090_at 5.8167640149844 6.2672064285666 7.33882946185597 7.35915310610277 7.7597929906034 7.58202832229596 5.77562150943794 5.92460909326285 5.28783929369782 5.25584322282242 7.38724003816816 7.15858311280859 7.38765900648688 7.10448588158889 6.79452356156168 6.79706923471441 6.93606775257572 6.89589813940137 5.74731863389071 0.182198321259756 0.17869145473594 0.190200649636145 0.178529632521051 0.179588440477054 0.180966516961894 0.185984917748054 0.189149137450211 0.2004979092913 0.185058698672844 0.176225521416659 0.176225521416659 0.181279208999440 0.178624642027869 0.176225521416659 0.177077240371681 0.190542012661671 0.186760220055204 0.185418264911799 5 5 + 25666042 25666612 25666293.545 25665239 25666846 + gene protein_coding_gene TRUE TRUE AT5G64090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G21050.1); similar to Os11g0169600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065852.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91611.2) 0.54929237391853 5.72494197452888 0.000154547317941932 0.651726039761126 7.07121508850756 12.9720128947472 0.54929237391853 0.087748953176168 AT5G42870_at 4.95767772254803 5.46552510085858 6.30752225736677 5.87865249578069 7.4248226713782 6.7169332146949 4.58006207957989 4.02136942488973 4.22640761700241 4.52615957354303 7.11990599977079 6.72295469079852 6.8215527447914 6.41368714280042 5.54698736806936 6.74236250088198 5.86810304302204 4.81290632827531 4.68096454264512 0.285107097558409 0.282265040928911 0.289368987159191 0.298486168532321 0.286846248939315 0.299406855871561 0.289316880685953 0.296848881174801 0.294229434405135 0.282265040928911 0.284777284472351 0.282265040928911 0.287828324961379 0.291197692450373 0.292152233990295 0.288018774120698 0.299530992591963 0.300765002137215 0.286211497780999 5 5|0 -|/ 17203087 17204202 17203782.375 17202691 17206909 - gene protein_coding_gene TRUE TRUE AT5G42870.1 lipin family protein similar to lipin family protein [Arabidopsis thaliana] (TAIR:AT3G09560.1); similar to lipin, N-terminal conserved re (GB:ABA94690.1); contains InterPro domain LNS2, Lipin/Ned1/Smp2; (InterPro:IPR013209); contains InterPro domain Hedgehog signalling region, N-terminal; (InterPro:IPR009045); contains InterPro domain Lipin, N-terminal conserved region; (InterPro:IPR007651) 0.816615850990271 5.70286886788071 0.000159514628081033 0.672513671989637 7.0454011622309 11.0360213150695 0.816615850990271 0.193873997750881 AT5G13240_at 7.68705208443855 7.98539799780756 9.13734173930956 8.96242333667286 9.24643477297102 8.89165529793214 8.50264371695269 8.64836117804127 8.13860166004056 7.57703105449581 9.72108876044923 10.0289586739651 9.67571841346317 9.70845930069328 9.68816388673015 9.98463632046297 9.4649338394821 10.0094076180861 8.04600234649265 0.1786390543354 0.169658520461164 0.17646404523383 0.17635751975513 0.172239339071727 0.167597195874216 0.179135665556354 0.172086808329636 0.191320039887003 0.183863043715682 0.174534420595599 0.172126184980106 0.170283280489202 0.177781174707352 0.178036340170249 0.166464872030828 0.184359496178833 0.167296101391827 0.176331577949695 5 5|0 -|/ 4225309 4226624 4225990.875 4225008 4227616 - gene protein_coding_gene TRUE TRUE AT5G13240.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92223.1); contains domain FAMILY NOT NAMED (PTHR22504); contains domain gb def: Hypothetical protein T31B5_60 (PTHR22504:SF5) 0.549957617870855 5.69833684548087 0.000160555452422187 0.676741231959519 7.04009037888694 17.4855217015205 0.549957617870855 0.0893721013336633 AT5G13090_at 6.97654310078252 7.09203529668089 7.6403418028177 7.79432039397267 8.42248088941325 8.2786396453797 8.26010733075053 8.45604664033246 8.00495718920793 8.02169060758333 8.42767971367888 8.76625833721383 8.73254495560366 8.60002223381601 8.55528650917738 8.74169037676385 8.3581879049488 8.23694461288811 8.16166307048344 0.147751220279646 0.14628894563997 0.146940421687944 0.137242513348533 0.143770238528624 0.134517404698291 0.138230735140555 0.141407513931851 0.141559963677922 0.140823875660930 0.133915111962331 0.138568881803589 0.135783781932888 0.149124166052183 0.136011216814736 0.135586664826825 0.146631905676477 0.135802594209052 0.130664723460433 5 5 - 4153762 4154266 4154046.909 4153588 4154675 - gene protein_coding_gene TRUE TRUE AT5G13090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24270.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23186.1) -0.489603847727603 -5.69794460184454 0.000160645875499128 0.676961719353327 7.03963056248514 16.1726129473177 -0.489603847727603 0.0536554221028804 AT5G26110_at 4.11660758364345 3.91018754023051 3.79739353907742 4.56835896404161 4.3819823904789 3.9762755772649 4.33476712164863 4.32431368508667 3.37344751659892 3.95093525041053 4.0447072765105 4.05328162331601 3.88717446235956 4.0212489004175 4.19629362958314 3.86405765779791 3.68813667175721 4.05110012055910 4.34065185304274 0.211241789886422 0.211873719792399 0.209144030526150 0.217701755857539 0.216443274370353 0.222859556124300 0.214806770096871 0.217741828849507 0.215549702308835 0.209319142577533 0.208584248956259 0.211079824065793 0.207904097526946 0.216522177018064 0.207904097526946 0.207904097526946 0.215566201228963 0.211321095664157 0.217398662390364 5 5 - 9118368 9119116 9118712.9 9117910 9119829 - gene protein_coding_gene TRUE TRUE AT5G26110.1 ATP binding / protein kinase/ protein serine/threonine kinase similar to ATP binding / protein kinase [Arabidopsis thaliana] (TAIR:AT1G08120.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47633.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function RIO1; (InterPro:IPR000687) -0.70627968178568 -5.69663150472214 0.000160948976906032 0.678078039705113 7.03809105607127 8.10828325825318 -0.70627968178568 0.154949575589377 AT5G14780_at 12.1999016170636 12.3086037214746 13.2331812480552 13.4124360056579 13.2987295942509 13.1215947052183 12.2994826222266 12.3722188785733 12.0636421685277 12.2723010235262 13.0365925010010 12.3748574384428 13.2620269396817 13.0203410234227 12.6464978902196 13.1233660774079 13.4659394450895 13.2427214957718 12.0204397243544 0.0653872054084948 0.0646602589330055 0.066778493042792 0.0649832997430957 0.0667560993908916 0.0663681175254076 0.0663430404603978 0.0653177187898596 0.0698703052353774 0.067318140160279 0.0650381796479805 0.0645484238551631 0.0653603870471597 0.0667989783499331 0.0655582077674497 0.0645484238551631 0.0671492458478396 0.065850415540641 0.0660546772921434 5 5|0 +|/ 4778357 4779160 4778726.8 4776946 4779497 + gene protein_coding_gene TRUE TRUE AT5G14780.1 FDH (FORMATE DEHYDROGENASE); NAD binding / cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor Encodes a NAD-dependent formate dehydrogenase. Identical to Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD- dependent formate dehydrogenase) (FDH) (FDH1) [Arabidopsis Thaliana] (GB:Q9S7E4); similar to PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE), phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G17745.1); similar to Formate dehydrogenase, mitochondrial precursor (NAD-dependent formate dehydrogenase) (FDH) (GB:Q07511); similar to formate dehydrogenase [Solanum lycopersicum] (GB:CAH60893.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; (InterPro:IPR006139); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140) 0.483556758046635 5.69572776336871 0.000161157941737531 0.67879725059848 7.03703131021132 25.3509371274896 0.483556758046635 0.0491352591215774 AT5G07240_at 7.56838889054701 8.0740903391898 8.06507944609663 8.33713376240832 8.48733566647762 8.35185480723906 8.40762924614139 8.57536820128529 9.18425717807564 8.70272291204516 9.78417217780925 9.4388181769689 9.02117226820865 9.46464286604147 8.76879097031896 8.98475911215306 8.51922318411392 9.12808342149491 8.52527707465278 0.180695958319628 0.161846183608257 0.180362095769974 0.168445967339352 0.160207531271448 0.166088498035719 0.165200246747017 0.161101152141418 0.170598848840733 0.157757197807900 0.161387768938912 0.164165039821240 0.161042447385290 0.167496636921334 0.173314524865308 0.165358043772534 0.168123528334125 0.159722334852699 0.158282078419556 5 5 + 2273483 2274021 2273778 2271920 2274289 + gene protein_coding_gene TRUE TRUE AT5G07240.1 IQD24 (IQ-domain 24); calmodulin binding similar to IQD23 (IQ-domain 23), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G62070.1); similar to IQ calmodulin-binding re (GB:ABE86306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.583853154811844 -5.68306449368473 0.000164116636275420 0.691095155355792 7.02216683570079 17.2047567917881 -0.583853154811844 0.106148820138803 AT5G53550_at 8.67599086401419 9.00373675081183 8.83611984872837 8.88558640463356 9.07994109096127 8.42427954153802 7.6958713942715 7.33129685786102 8.31870072758171 8.06236524066252 7.91259250869196 7.8501376803591 7.61020988819249 7.71707613260556 6.35410455804275 8.60308998604472 8.10459721620688 7.78537555870047 7.40437863181172 0.185529279647916 0.176799789549395 0.178117370014555 0.180625110803094 0.184248578136909 0.183549242142162 0.176916619694158 0.172857057759473 0.19493193275827 0.188984295452352 0.172305923660475 0.168170636052587 0.171954002632055 0.179760073124087 0.202254535977088 0.176298233030527 0.179308621696638 0.184170383133003 0.177854176544001 5 5 + 21775405 21775955 21775660.727 21773264 21776143 + gene protein_coding_gene TRUE TRUE AT5G53550.1 YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter similar to YSL2 (YELLOW STRIPE LIKE 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G24380.1); similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABD04075.1); similar to OPT oligopeptide transporter protein [Medicago truncatula] (GB:ABE88405.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABB76763.1); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -0.669122435160693 -5.6732440037244 0.000166451051145495 0.700758925322533 7.010619666669 16.3269175813312 -0.669122435160693 0.141933414133309 AT5G27220_at 1.08738452530051 1.13969016476634 1.42010271595083 1.91168567745784 2.15021733649106 1.63786645257404 1.1078213210969 1.2284431651838 0.718895736066207 1.61480136174087 1.80584206256754 2.33294222005659 2.23954032345129 2.50853153515646 1.73894214475631 2.20102119784115 2.21927090992958 2.50315879126354 1.71001694806198 0.212733781472038 0.216278466130078 0.219219163707061 0.212321081503785 0.212321081503785 0.21688509919811 0.212321081503785 0.216314188617366 0.225611798002714 0.21292946939801 0.215121767241206 0.21681544080998 0.220169485363410 0.230143900535345 0.213787233786348 0.217240717516702 0.213143719983875 0.225881193530517 0.217080986431254 5 5 + 9581970 9582715 9582447.727 9578760 9582755 + gene protein_coding_gene TRUE TRUE AT5G27220.1 protein transport protein-related similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to hypothetical protein MCAP_0860 [Mycoplasma capricolum subsp. capricolum ATCC 27343] (GB:YP_424802.1); contains InterPro domain Frigida-like; (InterPro:IPR012474); contains InterPro domain t-snare; (InterPro:IPR010989) 0.625692327901889 5.66509129514783 0.000168415953796014 0.708862749527422 7.00102048536221 3.23118183489474 0.625692327901889 0.124964490509244 AT5G23710_at 4.54155590575015 4.40918164311946 5.60688093291971 5.97575208239392 5.70118633470618 5.6974674940539 3.79678918993055 3.92724093925067 3.6492827342019 3.47351047013232 5.06867809344773 4.69814843469917 4.91342281407116 4.6697603752897 4.70572577343742 4.32052001088587 4.60231925004946 3.96811249161200 3.29833068800895 0.246037457216369 0.249709362712023 0.264635580480930 0.261548416827755 0.246981578433773 0.260721192505642 0.252512510798609 0.250480181815991 0.270201035261444 0.257742152128198 0.242704500985488 0.242704500985488 0.249279565622845 0.250885517450935 0.253728855157851 0.242704500985488 0.259392338518869 0.244313220132453 0.251984054616070 5 5 - 7996556 7997065 7996769.182 7996459 7997482 - gene protein_coding_gene TRUE TRUE AT5G23710.1 DNA binding / DNA-directed RNA polymerase similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD35466.1); contains InterPro domain RNA polymerase Rpc34 subunit; (InterPro:IPR007832) 0.513807796456047 5.6648470679371 0.000168475196230987 0.708943625739995 7.00073274436554 9.00302875004105 0.513807796456047 0.071482335530581 AT5G26960_at 6.10157408186563 6.0107074124633 6.07188758788209 6.30211669437678 6.56143307039784 6.25691028891193 5.62331893029519 5.5407574514572 6.46327661662146 5.76699502546405 6.4569867273751 6.67674715689008 6.69978374730264 6.45139402534805 6.70871033895727 7.07148253102636 6.47289177720688 6.49084954160046 5.90308693357408 0.212502117064850 0.210193880320850 0.218143624714306 0.212742189718651 0.217407665004007 0.213192671373798 0.218940764149827 0.228106252074263 0.219684700345475 0.212277976377205 0.225821890238173 0.210193880320850 0.217030099232197 0.214888914218755 0.214961874390617 0.216182746185160 0.224518392039126 0.214427845455636 0.216340280160155 5 5 - 9484933 9485440 9485188.909 9484737 9486152 - gene protein_coding_gene TRUE TRUE AT5G26960.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G67480.2); similar to Kelch motif family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95749.1); similar to Os11g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065701.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.50963090466 -5.65710327276046 0.000170365199864379 0.716726395829441 6.99160373881073 12.3951174843395 -0.50963090466 0.069397448060194 AT5G16200_at 2.84217199415435 2.78532385156067 3.52645457909763 3.55384818372106 2.94285287494128 2.94362305623249 3.70289876552188 3.51925287885371 3.55876730048424 3.14369948687827 3.7296238636055 3.54401717389386 3.07234041961862 3.53960211059534 3.90903336620426 3.59831478843008 3.27944581689938 3.56727216706243 3.49321303946662 0.219793434443367 0.215502609772616 0.222473070853878 0.224819022096139 0.215502609772616 0.227646715665612 0.215502609772616 0.220860609911319 0.217509973563194 0.216654238400902 0.225479455737105 0.216395079125483 0.216097923242179 0.228557368074662 0.215502609772616 0.215502609772616 0.224265299129278 0.231126832782607 0.216560926178985 5 5 - 5289672 5290112 5289916.636 5289575 5290205 - gene protein_coding_gene TRUE TRUE AT5G16200.1 50S ribosomal protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66890.1) -0.463398113540026 -5.65207077373002 0.000171605591752827 0.721773118912391 6.98566530382796 6.69131135079291 -0.463398113540026 0.0336049369450768 AT5G24540_at 1.51669360417108 1.57717313778181 3.51005862168457 3.97843138717223 1.75905547382424 1.48749234964345 0.869322003788294 1.28298533753692 1.39847409169689 0.942703832210067 1.11251207441247 1.09121339408333 1.21967968357623 1.05562090461416 1.49202650488366 0.732139280644392 1.3680957403306 1.12481159450453 0.90935297156321 0.214993021980598 0.213341566236920 0.231883898757268 0.252450429472365 0.212564912171988 0.216590663693947 0.216374949757073 0.214852886997859 0.224558050352414 0.215651984996421 0.223175241536689 0.211533608469126 0.229388683849687 0.211533608469126 0.215721829837302 0.213674049321542 0.211584962302477 0.213699609318775 0.211533608469126 5 5|0 -|/ 8384885 8385851 8385322.9 8384879 8388030 - gene protein_coding_gene TRUE TRUE AT5G24540.1 glycosyl hydrolase family 1 protein similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G24550.1); similar to DIN2 (DARK INDUCIBLE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G60140.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44460.1); similar to Glycoside hydrolase, family 1 [Medicago truncatula] (GB:ABE85996.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.608536684012456 5.65199921454791 0.000171623298759839 0.721773118912391 6.98558083025484 3.11416283726094 0.608536684012456 0.118374286271395 AT5G19220_at 10.6116675545259 10.5574790080727 10.5431753495424 10.4352368138124 10.6911263723596 10.6127825179480 11.1662692959097 10.9883115455662 11.2954403796790 11.2794061628543 11.8165857602247 11.9983118971145 11.534629972994 11.7841681795614 11.6564282580708 11.9021282890552 11.3439117991255 11.8729527383012 11.2459486461710 0.0800499128515512 0.0775912813521114 0.080990100698802 0.0825306567041704 0.0802439912853595 0.0809354855435265 0.0778077300871355 0.0775912813521114 0.082188300838182 0.0795724421118523 0.0821438916718081 0.0787147097095626 0.0798235035865456 0.0806761963058374 0.0831606297156968 0.0790810423304538 0.0786698005428414 0.0805687921228192 0.078735854238396 5 5|0 -|/ 6464332 6465059 6464666.429 6463826 6466833 - gene protein_coding_gene TRUE TRUE AT5G19220.1 ADG2 (ADPG PYROPHOSPHORYLASE 2); glucose-1-phosphate adenylyltransferase Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Identical to Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (ADG2) [Arabidopsis Thaliana] (GB:P55229;GB:O04929;GB:Q9SXS1); similar to APL2 (large subunit of AGP 2) [Arabidopsis thaliana] (TAIR:AT1G27680.1); similar to glucose-1-phosphate adenylyltransferase, putative [Medicago truncatula] (GB:ABE77800.1); similar to ADP-glucose pyrophosphorylase [Cicer arietinum] (GB:AAK27718.1); similar to ADP-glucose pyrophosphorylase large subunit [Brassica rapa subsp. pekinensis] (GB:AAK27685.1); contains InterPro domain Glucose-1-phosphate adenylyltransferase; (InterPro:IPR011831); contains InterPro domain ADP-glucose pyrophosphorylase; (InterPro:IPR005836); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835) -0.469043735659409 -5.6514654767348 0.000171755431391568 0.72205983357015 6.98495073923011 22.2068750612374 -0.469043735659409 0.0396116971188642 AT5G49160_at 4.30809688607923 4.67849658085977 4.30621559478093 4.5168697597128 3.82605935130269 3.68453286219152 4.72202321526165 5.2708205191119 4.90706321329261 4.63768331115203 6.42296294052634 7.2416326507378 5.26488576494849 6.20477004243552 6.91596304113704 6.47806560942168 5.24420338103579 5.7510677409931 5.19892279053584 0.225516122701328 0.217624415916095 0.220837972976140 0.234987530845898 0.227744934421794 0.219571088191 0.217819136660032 0.223324229597655 0.228275360469355 0.222803299527641 0.22445379411259 0.221099618754373 0.23382509537439 0.226111778842916 0.226274638691296 0.225171465870913 0.233986516601895 0.220340333812458 0.226558741488311 5 5 + 19954621 19955371 19954924 19949456 19955595 + gene protein_coding_gene TRUE TRUE AT5G49160.1 MET1 (DECREASED METHYLATION 2DNA) encodes a cytosine methyltransferase. Identical to DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) (DNA methyltransferase AthI) (DNA Metase AthI) (M.AthI) (ATHIM) [Arabidopsis Thaliana] (GB:P34881); similar to DNA (cytosine-5-)-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT4G08990.1); similar to MET2 (DNA methyltransferase 2), DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G14140.1); similar to MEE57 (maternal effect embryo arrest 57), DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G13610.1); similar to DNA methyltransferase 1a [Brassica rapa] (GB:BAF34635.1); similar to DNA methyltransferase 1b [Brassica rapa] (GB:BAF34636.1); similar to DNA cytosine-5-methyltransferase [Prunus persica] (GB:AAM96952.1); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025) -0.618040535391371 -5.64491420502672 0.000173386146512923 0.728741973793813 6.97721266400395 9.9666395135282 -0.618040535391371 0.122707757472787 AT5G48230_at 7.33520128672385 7.25563969077476 7.37230591529311 7.3980955680879 7.92881164605378 7.80651893835573 7.68994226252367 7.85246405504971 7.38529475806968 7.14511187473012 8.62862841123625 8.6357827360737 8.15723414457271 8.22526034300003 8.48484816750705 7.84509730227899 7.7274538167562 8.41677553582138 7.59811089144473 0.136314961384591 0.130285749911189 0.140259248816348 0.136780199331111 0.135084411128224 0.139649637975460 0.132832679724414 0.128186539540202 0.139581263794918 0.139334377091989 0.134810645414542 0.136664446724096 0.128186539540202 0.130135231215466 0.129969432642306 0.131521352852237 0.135595979497028 0.139421989560408 0.132037621486560 5 0|5 /|- 19569797 19570448 19570142.714 19569368 19572755 - gene protein_coding_gene TRUE TRUE AT5G48230.1|AT5G48230.2 ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276); acetyl-CoA C-acetyltransferase Identical to Acetyl-CoA acetyltransferase, cytosolic 1 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 1) (Thiolase 1) (AAT1) [Arabidopsis Thaliana] (GB:Q8S4Y1;GB:Q93YW6;GB:Q9LUB1); similar to acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G47720.5); similar to Acetoacetyl-coenzyme A thiolase [Raphanus sativus] (GB:CAA55006.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Acetyl-CoA acetyltransferase, cytosolic 1 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 1) (Thiolase 1) (AAT1) [Arabidopsis Thaliana] (GB:Q8S4Y1;GB:Q93YW6;GB:Q9LUB1); similar to acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative [Arabidopsis thaliana] (TAIR:AT5G47720.1); similar to Acetoacetyl-coenzyme A thiolase [Raphanus sativus] (GB:CAA55006.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); contains InterPro domain Thiolase; (InterPro:IPR002155) -0.466130886052414 -5.63506186265317 0.000175869741931553 0.739004655596386 6.96556111447569 15.4005262029765 -0.466130886052414 0.0380578616887626 AT5G48220_at 9.27290350014345 9.30765574726949 9.4595905061712 9.27809966070272 9.73727427697395 9.39784423954938 9.82750642478744 9.65363150317917 9.88356103982656 9.5690861796301 10.0793889259506 10.2322534343713 9.86041008705745 10.1423388382376 10.2966209467904 9.9626460943544 9.74940644668879 9.81282254167042 9.33326355188126 0.0623873758064611 0.059541942618287 0.0639440919133693 0.0612909841101412 0.062545215962124 0.0602447982050503 0.0628039827046818 0.0627823701997132 0.0645490612409166 0.0604879245769494 0.0604866046440652 0.0622854628979822 0.0613501189782734 0.0594519234761996 0.0612144446215078 0.0612848754527478 0.0698635524024142 0.0608497151247591 0.0602717313244667 5 5|0 +|/ 19568130 19569233 19568827.333 19567024 19569493 + gene protein_coding_gene TRUE TRUE AT5G48220.1|AT5G48220.2 indole-3-glycerol phosphate synthase, putative|indole-3-glycerol-phosphate synthase similar to indole-3-glycerol phosphate synthase (IGPS) [Arabidopsis thaliana] (TAIR:AT2G04400.1); similar to OSIGBa0115M15.12 [Oryza sativa (indica cultivar-group)] (GB:CAH66774.1); similar to indole-3-glycerol phosphate synthase (GB:AAA60380.1); similar to OSJNBa0016O02.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE05999.3); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain Indole-3-glycerol phosphate synthase; (InterPro:IPR001468) -0.513261883813563 -5.62421483123557 0.000178648060747713 0.750500503201142 6.9527132217116 19.2979579847652 -0.513261883813563 0.0733375946306471 AT5G13190_at 10.3289299319149 10.3596525947952 11.7911023843658 11.7930354520704 11.2089330499049 11.1046381927759 9.3793907154550 9.59982253581086 9.82182646391124 9.55461933574983 10.3132961345601 10.0836112119087 10.3191653768135 10.2896650217304 10.0484657485243 10.4754305365998 10.3980240824368 10.3622007250845 9.51825983466127 0.0890529451248336 0.0836646756527676 0.087758881598064 0.0861527552941013 0.0866132256033604 0.0874365552155287 0.086446190808171 0.086039068328852 0.0832011026414736 0.0851912931106533 0.086027882457773 0.0855577156681967 0.0857283492849114 0.0923979716754685 0.0825490673726809 0.0855733324345909 0.0883390384289877 0.0850636475618656 0.0865022193652816 5 5|0 -|/ 4204999 4206159 4205627.9 4204820 4206408 - gene protein_coding_gene TRUE TRUE AT5G13190.1 similar to LITAF-domain-containing protein [Pisum sativum] (GB:AAY40471.1); similar to Os02g0515600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046956.1); contains InterPro domain LPS-induced tumor necrosis factor alpha factor; (InterPro:IPR006629) 0.469406431331169 5.61891669993133 0.000180022098461888 0.756092813539928 6.94643016289318 20.6545885568773 0.469406431331169 0.0425359856616175 AT5G16600_at 1.90556309479152 2.00180236808008 2.59839824573583 2.41346627417614 2.68450453168408 2.42527052238095 2.28982038862707 2.6960954787649 2.42541138746161 2.47134554596074 3.72295769341377 5.09246346201904 3.91382045128825 4.42895040633691 3.70098131530407 4.1431934875597 3.74456251697259 3.59970824196836 2.63428489640866 0.210541593956849 0.207363662171402 0.205369103702587 0.206622002723271 0.209319552114716 0.208445770637281 0.203407048438346 0.206320623581612 0.210050061033348 0.205848382153912 0.203126757682952 0.218207429657226 0.207878386837502 0.222348359811360 0.210194225485853 0.217269609613084 0.2241687432494 0.202509062000543 0.203429486150213 5 5 + 5439661 5440191 5439915.909 5438294 5440248 + gene protein_coding_gene TRUE TRUE AT5G16600.1 MYB43 (myb domain protein 43); DNA binding / transcription factor Encodes a putative transcription factor (MYB43). similar to MYB20 (myb domain protein 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G66230.1); similar to myb-related transcription factor [Solanum lycopersicum] (GB:CAA67600.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.544312037368798 5.60919396913898 0.000182573053967585 0.766624253609891 6.93488694271318 5.65370359976416 0.544312037368798 0.0908699398400675 AT5G22440_at 7.68080923280906 7.90052067789632 7.5561246351325 7.53710127062635 8.3759635171118 7.74942490154348 8.09838836149363 8.24621886930316 6.7855236225772 6.91747776806032 7.97549216375974 8.23731344831294 7.66577298246693 7.68925676569203 8.64942477556328 7.31195136926392 7.70902463964441 7.24194467964705 7.01309808670784 0.19202775811138 0.177379781853072 0.192535583653417 0.185851856991006 0.181044215411753 0.189567381432917 0.177238014858018 0.181362581337231 0.217210878466473 0.190505327812753 0.186769341044027 0.184542959349592 0.182775612515094 0.192837877382549 0.182779642401768 0.180550693272266 0.189162359210365 0.183793572586787 0.189331590209348 5 5|0 -|/ 7435337 7436156 7435811 7435079 7436689 - gene protein_coding_gene TRUE TRUE AT5G22440.1|AT5G22440.2 60S ribosomal protein L10A (RPL10aC) Identical to 60S ribosomal protein L10a-3 (RPL10AC) [Arabidopsis Thaliana] (GB:P59231;GB:P53029;GB:Q9FMQ7); similar to 60S ribosomal protein L10A (RPL10aA) [Arabidopsis thaliana] (TAIR:AT1G08360.1); similar to putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa (japonica cultivar-group)] (GB:BAD09090.1); contains InterPro domain Ribosomal protein L1; (InterPro:IPR002143) -0.602283410809607 -5.60722972605823 0.000183093081121634 0.768624754548618 6.93255286582145 15.2507634809857 -0.602283410809607 0.117758517565864 AT5G40580_at 8.14773491897241 8.48855215308784 9.69576674464832 9.54703961589219 9.8599273414694 9.45805303496493 8.57276489972407 8.29580261317456 8.32553458612622 7.53149210181795 9.42183937166798 9.27706312308941 9.36858114541708 9.47826795372614 9.19488312886718 9.19064927263951 8.99389409907116 9.38614660740419 7.52013665093538 0.141949290671006 0.122893968518887 0.132168389926077 0.123539280157207 0.124220783382787 0.130787088283340 0.122628778965413 0.124946484766643 0.129586446813028 0.128910824705124 0.120574871712804 0.120574871712804 0.121064196156297 0.121708087487287 0.123394151711212 0.12288956465301 0.127684062159989 0.128446341398439 0.130936101264082 5 5|0 -|/ 16265792 16266981 16266472.9 16265514 16268100 - gene protein_coding_gene TRUE TRUE AT5G40580.1|AT5G40580.2 PBB2 (20S proteasome beta subunit B 2); peptidase Encodes 20S proteasome beta subunit PBB2 (PBB2). Identical to Proteasome subunit beta type 7-B precursor (EC 3.4.25.1) (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) (PBB2) [Arabidopsis Thaliana] (GB:Q7DLS1;GB:O23709;GB:Q8LAK8;GB:Q8RWL9); similar to PBB1 (20S proteasome beta subunit B 1), peptidase [Arabidopsis thaliana] (TAIR:AT3G27430.2); similar to Os05g0187000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054834.1); similar to proteasome subunit beta type 7 [Dictyostelium discoideum AX4] (GB:XP_638961.1); contains InterPro domain Peptidase T1A, proteasome beta-subunit; (InterPro:IPR000243); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) 0.57542504775401 5.60028193562374 0.000184945206430633 0.776215031389365 6.92429139841334 17.5488568489226 0.57542504775401 0.106183838977243 AT5G57700_at 4.75259124571941 4.86234978194656 4.56370678128647 4.10185298663925 5.25102083929857 4.72222750364105 5.2452971180454 4.91591759984907 6.34307021341152 6.01368442385862 7.91656077739154 8.31431399364105 7.06729459774464 7.07641453148557 7.94406559496015 6.83951324203279 5.43907389454907 7.02221164845148 6.21795035606669 0.21065697211128 0.211086279822265 0.217833994395338 0.224770066478645 0.216014268488909 0.222115439273953 0.222504554733156 0.219392325251087 0.233102422264302 0.220028353807107 0.214713309809491 0.213503186568483 0.210894301013203 0.221480465907546 0.214038161811413 0.213432671602365 0.217967841669448 0.218002836042765 0.217602966220984 5 0|5 /|+ 23393491 23394062 23393726.5 23392100 23394368 + gene protein_coding_gene TRUE TRUE AT5G57700.1|AT5G57700.2|AT5G57700.3 BNR/Asp-box repeat family protein similar to Sialidase [Medicago truncatula] (GB:ABE86417.1); contains InterPro domain Glycosyl hydrolase, BNR repeat; (InterPro:IPR002860); contains InterPro domain Sialidase; (InterPro:IPR011040) -0.644397693606013 -5.60019425365792 0.000184968707825089 0.776215031389365 6.92418708262787 11.4988701651254 -0.644397693606013 0.135543801649594 AT5G58370_at 3.95196291543109 4.47626507178216 4.5074950345428 4.64838586234389 4.10943256283133 4.10229784694548 4.39449253685328 5.07226443397462 3.18423440441451 3.43584286756139 3.73491873325783 4.13655695969010 3.85500608109837 3.73489822483038 4.07707457149171 4.27186171319253 4.13701717346951 3.65062160892229 4.32180337832833 0.253440694030957 0.247059457404884 0.258202741665868 0.254728338819791 0.247898636059904 0.255743795049228 0.260019328334335 0.250902819237229 0.249326147967342 0.249303160186639 0.243579900254799 0.249188816548989 0.243579900254799 0.248161296830692 0.243579900254799 0.243579900254799 0.256540152780202 0.260225502297989 0.246607527144436 5 5|0 +|/ 23611495 23612486 23612042.667 23610343 23613252 + gene protein_coding_gene TRUE TRUE AT5G58370.1|AT5G58370.2 GTP binding similar to GTP binding [Arabidopsis thaliana] (TAIR:AT5G11480.1); similar to Os03g0816400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051692.1); similar to Predicted GTPase (ISS) [Ostreococcus tauri] (GB:CAL55148.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP-binding; (InterPro:IPR005289)|similar to EMB2001 (EMBRYO DEFECTIVE 2001), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22870.1); similar to Os03g0816400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051692.1); similar to GTP-binding protein [Parvularcula bermudensis HTCC2503] (GB:ZP_01018492.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP-binding; (InterPro:IPR005289) -0.680554188051405 -5.58782758726308 0.000188315478068429 0.789983430497058 6.90946063197325 8.20634349976083 -0.680554188051405 0.150285658465592 AT5G10770_at 2.40816172564155 3.66949513425879 5.5066534304555 4.67995578341755 5.44691098430357 5.28171344682124 1.44636609723787 2.07889900594519 3.70496151766376 3.48182477973806 3.96032926309084 4.433411640508 5.2697921099572 3.56526998985671 3.17382919592503 4.56095892735061 4.7929396552548 4.93356091123898 3.58927915855743 0.236635526214687 0.239084731918479 0.260439365763727 0.240500030049576 0.241943246198518 0.252126634502284 0.251023728886631 0.239064970139296 0.245075242170926 0.239066979433472 0.235456322318541 0.235456322318541 0.235456322318541 0.241758674642476 0.242421606319967 0.235456322318541 0.251482326587501 0.235581655707265 0.240910091659763 5 5 - 3403412 3403895 3403691.091 3403111 3405449 - gene protein_coding_gene TRUE TRUE AT5G10770.1 chloroplast nucleoid DNA-binding protein, putative similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G10760.1); similar to CND41, chloroplast nucleoid DNA binding protein [Nicotiana tabacum] (GB:BAA22813.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 1.07078673786787 5.57555354387859 0.000191701138474802 0.80399457476332 6.89481746792903 7.77891109116058 1.07078673786787 0.284451497744135 AT5G53160_at 9.25174850520695 9.4638338341747 10.1674407475965 10.3495547628774 10.3528894653555 10.237486725691 8.62782881879998 8.77278535798128 8.90886832827256 9.0357454283001 10.0675998807439 9.5008373703379 10.1317717108597 10.1070333259719 9.61645024026527 10.3433092969032 10.2499132282746 10.2907163034024 8.74631524863588 0.154766323668011 0.138472988209386 0.144803548363137 0.141198271149585 0.147717311882475 0.150436317167414 0.151301669393311 0.144036270464229 0.154540299908156 0.146630167692599 0.145116627552997 0.144713427071019 0.139221612808443 0.147890915901179 0.142210415318224 0.147435188355697 0.159848070369034 0.142076496407533 0.151056757731378 5 5|0 +|/ 21578270 21579144 21578688.9 21577944 21579486 + gene protein_coding_gene TRUE TRUE AT5G53160.1|AT5G53160.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27920.1); similar to CAPIP1-like [Solanum tuberosum] (GB:ABB29920.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01360.1); similar to CAPIP1 [Capsicum annuum] (GB:AAT35532.1); similar to CAPIP1-like [Solanum tuberosum] (GB:ABB29920.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) 0.484889185207645 5.57365901346295 0.000192229482981356 0.806018222140825 6.89255485935131 19.1206611545426 0.484889185207645 0.0580380792031139 AT5G19720_at 3.05462039805251 2.91464113211484 2.93482397510101 2.91805308486274 2.61484966542292 2.63178761319126 3.22368621798961 2.91722751528035 3.04952022941845 3.29789868831088 2.77403369997615 3.13806494628579 3.3378884264583 3.06925251416527 3.55911668663802 3.03652426460727 3.68521947159416 3.13138325528024 2.81774035194277 0.204624054187694 0.194642529154532 0.194258869847000 0.194998679975325 0.203459304163852 0.202347598077643 0.194258869847000 0.198053846048125 0.209509507629138 0.194843510044707 0.194258869847000 0.19739908773072 0.203493049555749 0.201345892025469 0.197179819355374 0.194258869847000 0.205333242301092 0.197182841537932 0.200392975202731 5 5|0 +|/ 6667682 6668546 6668085.333 6667666 6668589 + gene protein_coding_gene TRUE TRUE AT5G19720.1 tRNA synthetase class I (E and Q) family protein similar to OVA9 (OVULE ABORTION 9), glutamine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G25350.1); similar to Glutaminyl-tRNA synthetase (Glutamine--tRNA ligase) (GlnRS) (GB:P52780); contains InterPro domain Ribosomal protein L25-like; (InterPro:IPR011035); contains InterPro domain Glutamyl-tRNA synthetase, class Ic; (InterPro:IPR000924) -0.485317006457462 -5.57189855444941 0.000192721830340709 0.807889912788253 6.89045179517326 6.03695544926008 -0.485317006457462 0.0584502952617606 AT5G50460_at 9.88996429269178 10.2129711155454 10.9102088704186 11.0273180851782 10.3179939641385 10.1239859264448 8.83666138496809 9.1227885003454 8.54943911009647 8.43433653556407 10.1084035171160 10.3705024227271 9.6385362648285 9.79910430841186 10.4375762732025 9.67805665205721 9.29944040704236 9.570411907417 8.45268843411645 0.111241943459145 0.113399402123620 0.110306398199851 0.118779481184512 0.112186693681753 0.110899458137326 0.113932371695211 0.115499354194638 0.137252823776336 0.129033664460660 0.113794713679818 0.110306398199851 0.113757631318182 0.113037069086882 0.117178492879791 0.112923933316450 0.122400504598240 0.113984698666458 0.119770702027399 5 5 - 20569412 20569694 20569529.727 20568663 20569792 - gene protein_coding_gene TRUE TRUE AT5G50460.1 protein transport protein SEC61 gamma subunit, putative Identical to Protein transport protein SEC61 gamma-1 subunit (SEC61G2) [Arabidopsis Thaliana] (GB:Q9SW34); similar to protein transport protein SEC61 gamma subunit, putative [Arabidopsis thaliana] (TAIR:AT4G24920.1); similar to Os02g0178400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046076.1); similar to Protein transport protein SEC61 subunit gamma (GB:Q7Z1B8); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_797211.1); contains InterPro domain Protein secE/sec61-gamma protein; (InterPro:IPR001901); contains InterPro domain Protein translocase SEC61 complex gamma subunit; (InterPro:IPR008158); contains InterPro domain SEC61 complex gamma subunit; (InterPro:IPR008159) 0.527381470029907 5.56388185702924 0.000194980930675887 0.817165080462641 6.8808679524072 19.2260241819793 0.527381470029907 0.0843463213191498 AT5G47040_at 9.57661530548362 9.592696387112 10.2137187902266 10.2068978491936 10.2900734052631 10.0892459840979 10.3231733249096 10.2017270739700 10.3660275470374 10.4535352109877 10.6242620909468 10.4486685715832 10.4487831657522 10.4832242121003 10.3273430775119 10.6053580466174 10.3216964648485 10.4176955634421 10.2991415977823 0.07519867655993 0.0765231109251594 0.0747290975986944 0.0751828739010513 0.0762969844594794 0.07513178806817 0.0781236603512449 0.0751764538895 0.0819844836442584 0.077860978758046 0.0749048015443225 0.0744189189572933 0.0744189189572933 0.0834492903183627 0.0761370931230503 0.0744449350563555 0.0785134268625221 0.0793165759571104 0.0779937460501448 5 5 - 19110590 19111554 19111197.818 19110379 19115942 - gene protein_coding_gene TRUE TRUE AT5G47040.1 Lon protease homolog 1, mitochondrial (LON) Identical to Lon protease homolog 1, mitochondrial precursor (EC 3.4.21.-) (LON) [Arabidopsis Thaliana] (GB:O64948); similar to LON_ARA_ARA (Lon protease homolog gene), ATP binding / ATP-dependent peptidase/ serine-type peptidase [Arabidopsis thaliana] (TAIR:AT5G26860.1); similar to Lon protease homolog 1, mitochondrial precursor (GB:P93647); similar to Lon protease [Dichanthelium lanu (GB:AAK62365.1); similar to Lon protease [Oryza sativa (indica cultivar-group)] (GB:AAM95459.1); contains InterPro domain Peptidase S16, active site; (InterPro:IPR008268); contains InterPro domain Peptidase S16, lon C-terminal; (InterPro:IPR008269); contains InterPro domain Peptidase S16, lon N-terminal; (InterPro:IPR003111); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Peptidase S16, ATP-dependent protease La; (InterPro:IPR004815); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.462768029234677 -5.56218964757708 0.000195461395136894 0.818983245623584 6.87884347240796 20.4780336905501 -0.462768029234677 0.0407270727582038 AT5G13570_at 6.44709810468854 7.06149012327845 8.0370566899736 8.02496526442612 8.54369445246242 8.1856866642581 6.22759163399976 6.14613022515083 5.7820850783449 5.15774863859182 7.0339498201496 6.79412403799655 6.85729764697547 7.43119405098378 6.65803114338125 7.36763706122751 7.20949906480165 6.78198734999032 5.37326024285784 0.226201913627555 0.223923203057432 0.229903129018348 0.22315459858041 0.227473748994294 0.233988629814625 0.220836628332082 0.224499315469442 0.23997773724861 0.226584986855120 0.228340834378448 0.230190545410576 0.233208423724311 0.228401372669072 0.230440249291901 0.220836628332082 0.230547804837859 0.232586245319668 0.229986366111951 5 5|0 +|/ 4369161 4369949 4369465.444 4367302 4370268 + gene protein_coding_gene TRUE TRUE AT5G13570.1 DCP2 (DECAPPING 2); hydrolase Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5?-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. similar to Os02g0805900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048445.1); similar to Putative ABC transporter [Oryza sativa] (GB:AAK98701.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Dcp2, box A; (InterPro:IPR007722) 0.611543818904355 5.56029506301767 0.000196000818263366 0.821047427705239 6.87657627274048 13.5614206490480 0.611543818904355 0.123879739074247 AT5G51830_at 4.82407062932312 5.69020811173222 7.35529630904745 7.27413801865065 6.6618879210252 5.62229480691408 3.9078550418076 3.93638153865836 3.97879453362315 3.33128061824578 5.3036652073494 5.20131261779219 5.17464647918074 5.59449765783168 4.77324863482397 5.24356081449625 5.2021009058181 4.62742923820146 3.46341957468953 0.261365727991213 0.250024086513541 0.266430473764661 0.268089710665328 0.257003306932132 0.261966770471536 0.263688188502449 0.253497751505088 0.251842144856029 0.258125401440062 0.252868430812502 0.254256371304672 0.255278798884321 0.257412695403022 0.249807287982069 0.254314659588742 0.256636249608221 0.256090598986736 0.256865703050474 5 0|5 /|+ 21087865 21088612 21088219.7 21086798 21088961 + gene protein_coding_gene TRUE TRUE AT5G51830.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66430.1); similar to fructokinase (GB:AAB57733.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) 0.914675356791767 5.55544250174708 0.000197389686769420 0.82666800819033 6.8707664121823 10.0246278487896 0.914675356791767 0.234637390457859 AT5G57850_at 6.095517106506 5.83337458518227 6.4877979670745 6.40287646940928 6.58791559129794 6.72269367685744 6.11935415704924 6.12093597526032 5.43649883903522 5.97628302402323 6.761487674154 6.97907054469886 6.52077673600938 6.46728280406136 6.74483439322123 6.63469309105679 5.79946812877986 6.47318638667695 6.35026392047796 0.174512995102372 0.171421380062021 0.167885448614041 0.172533237284823 0.171981410863563 0.173748362916991 0.177098783716592 0.179269637686613 0.19538578897536 0.169062214657566 0.176506943956345 0.169266557543028 0.172123807169506 0.173041265243977 0.175104001410749 0.167885448614041 0.184529831919661 0.182467866984430 0.172064606989049 5 5 - 23452798 23453444 23453173.455 23452517 23454553 - gene protein_coding_gene TRUE TRUE AT5G57850.1 aminotransferase class IV family protein Identical to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8L493;GB:Q9FJM9); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT3G05190.1); similar to 4-amino-4-deoxychorismate lyase [Lycopersicon esculentum] (GB:AAT74744.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544) -0.476285992311562 -5.55161049555014 0.000198493875646327 0.831093857331171 6.86617546255833 12.5306158065852 -0.476285992311562 0.0530852047664642 AT5G08240_at 4.8501659762889 5.41888657334926 5.44406690431898 6.15608016859478 6.26557772496775 6.18827130410083 1.91627986135501 2.02231547624129 3.35053972173016 2.19338265487748 2.51293284294977 2.77991194515363 2.78133522618246 2.49591745804254 2.50517401051147 2.66684940126182 2.81874983381093 2.72754584234526 1.72500017417532 0.315182905813841 0.311834789105426 0.339641087461259 0.338389685763429 0.334985199880861 0.337627650449483 0.304745298801461 0.303659853263714 0.31455331502266 0.303659853263714 0.303659853263714 0.303659853263714 0.310665930730028 0.303659853263714 0.306746844923821 0.308772055804112 0.307434447204351 0.311373098145701 0.308140387789002 5 5 - 2651387 2652115 2651638.182 2650838 2652387 - gene protein_coding_gene TRUE TRUE AT5G08240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23160.1) 0.699687230417368 5.55037556312708 0.000198851122388866 0.832390798319793 6.86469538736938 7.32471862546538 0.699687230417368 0.159325541052033 AT5G64440_at 8.15264086345249 8.19835828216052 8.85820918261692 8.77978989207874 9.59478170491748 9.05734072178667 7.57821475936368 7.30868123173629 7.98211305541546 7.08680813009958 9.0419886710446 9.28256073462061 8.9617339219716 9.15998945236952 8.72617169253992 9.07161933626727 8.48532052375402 9.06968045656032 7.03712126765345 0.188284850063886 0.178828561895304 0.188470979869136 0.183069798963745 0.177060209011469 0.178831416730276 0.199878283742495 0.182696351037549 0.185488021444174 0.183215389358305 0.178179280729455 0.180909094912876 0.178939104528012 0.18227853017822 0.176523963231881 0.176523963231881 0.191624981923188 0.178508118379127 0.187201096846189 5 5|0 +|/ 25786151 25787273 25786572.625 25782976 25787726 + gene protein_coding_gene TRUE TRUE AT5G64440.1 amidase family protein AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. similar to glutamyl-tRNA(Gln) amidotransferase, putative [Arabidopsis thaliana] (TAIR:AT3G25660.1); similar to OSIGBa0123D13.5 [Oryza sativa (indica cultivar-group)] (GB:CAH65756.1); similar to Os04g0102700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051996.1); similar to N-acylethanolamine amidohydrolase [Medicago truncatula] (GB:AAZ04133.1); contains InterPro domain Amidase; (InterPro:IPR000120) 0.566300470198282 5.53155332575207 0.000204381814238948 0.855337892589998 6.8421030247699 16.612784037946 0.566300470198282 0.105226741840904 AT5G22340_at 7.64408061603672 7.64428294618572 7.70534425027062 7.45980656292163 8.23434052680119 8.07410107594189 8.14320276117128 8.00197270005456 8.096530463329 8.11083453050785 8.96850617217994 9.35781481242537 8.55268546429948 8.73251948485769 9.47188197717033 8.81496190930995 8.53579952931217 8.61924160911122 7.9997008667635 0.110936342871093 0.101713056964879 0.104112683173049 0.105819063660001 0.103028311709799 0.103616440124507 0.105392298402978 0.104709855668788 0.111453227950503 0.110944444879798 0.110117510115203 0.111481345152402 0.107962513505677 0.102049173956333 0.109531584565027 0.101882424100531 0.105107733655340 0.103170554447654 0.109931795510375 5 5|0 +|/ 7395295 7396522 7396025.444 7394447 7396878 + gene protein_coding_gene TRUE TRUE AT5G22340.1|AT5G22340.2 similar to Os03g0322600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049968.1) -0.478549271844576 -5.52799238457471 0.000205446486322718 0.859588098774252 6.83782168729753 16.3387405916063 -0.478549271844576 0.0563189669598805 AT5G12110_at 3.09603222216025 3.34689766270084 3.25164684092200 3.42925074354511 2.63220631369414 3.09006741878178 4.7344848815006 5.27711234484948 3.79127717119905 4.60250509506123 5.30593581141563 6.2925388798261 5.31543258811956 5.84008329214436 6.98266485271744 5.38467409780815 4.66740537211602 5.98642050022148 4.64937004064357 0.216907655992867 0.220924835190067 0.226290099909385 0.217364433148430 0.216665463827791 0.216934626764382 0.222043110171163 0.216665463827791 0.222319835123279 0.216665463827791 0.217027591270914 0.216986519040937 0.222652259288673 0.228679962291073 0.220486309087088 0.217609565073079 0.222555617738587 0.223225465471870 0.223245910401703 5 5|0 +|/ 3914699 3915632 3915038.125 3914469 3915936 + gene protein_coding_gene TRUE TRUE AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) Identical to Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor 1-beta' 1) (EF-1-beta' 1) [Arabidopsis Thaliana] (GB:Q84WM9;GB:Q9SCX2;GB:Q9SCX4); similar to elongation factor 1B alpha-subunit 2 (eEF1Balpha2) [Arabidopsis thaliana] (TAIR:AT5G19510.1); similar to unknown [Solanum tuberosum] (GB:ABA40427.1); similar to Elongation factor 1-beta' , putative [Solanum demissum] (GB:AAT40505.1); contains InterPro domain Elongation factor 1, beta/beta' (InterPro:IPR001326); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) -0.631402464452801 -5.52257786546912 0.00020707670086307 0.86620183971022 6.83130743251274 8.64201823348463 -0.631402464452801 0.13388638555204 AT5G28530_at 2.87423438078477 2.89868234341027 3.86885763455830 3.62476857019054 3.80346832013333 3.81357532346501 3.10429008495433 3.05816212347884 2.53854744730188 2.79115155165624 4.24502303112465 4.74442270435481 4.14591064090237 3.87172731207812 4.68199464035956 4.28663421344894 3.88024991830334 3.64894399631475 3.34774355914865 0.23925418219462 0.232952876998172 0.235808996562993 0.233741366136847 0.237843246903298 0.240228770502115 0.247747374788336 0.240011379773201 0.240233471457118 0.248596961659758 0.233546374427036 0.233169064431754 0.233676937575452 0.242434936428688 0.237436379670513 0.232952876998172 0.235013808494196 0.239703421367078 0.234670733827715 5 5 - 10525123 10525637 10525401.182 10525082 10527304 - gene protein_coding_gene TRUE TRUE AT5G28530.1 FRS10 (FAR1-RELATED SEQUENCE 10); zinc ion binding similar to FRS11 (FAR1-RELATED SEQUENCE 11), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G10240.1); similar to FAR1 [Medicago truncatula] (GB:ABE91851.1); similar to FAR1; Zinc finger, SWIM-type [Medicago truncatula] (GB:ABE78949.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1; (InterPro:IPR004330) 0.461880059965497 5.51991300407688 0.000207884102669344 0.869371317363196 6.82809938667886 6.92105192752846 0.461880059965497 0.0432315054844336 AT5G04790_at 3.15221083588111 3.6198394387353 3.22775914821279 3.15421129865777 4.175770349003 3.46685026930711 3.30270986083486 4.06290431455947 4.16758442864655 4.06851583433446 4.01970377614886 4.18263034641006 4.21724620725877 3.93174417999568 4.11927537457517 3.79275839626084 4.19194476939029 3.95433175817512 4.43764431903689 0.236425717654571 0.237652356335345 0.246881999954063 0.270896550750534 0.243565371133798 0.259900426099205 0.248659436245719 0.231887915902928 0.247149417432437 0.254486274591982 0.241414823181433 0.237093253180621 0.252253593628309 0.244799622603053 0.231887915902928 0.231887915902928 0.239016310552833 0.236257274872022 0.247639087300825 5 5 - 1388168 1388223 1388185.857 1388156 1388320 - gene protein_coding_gene TRUE TRUE AT5G04790.1 unknown protein -0.800520076541967 -5.51564752938416 0.000209183453893155 0.87459602072728 6.82296182349117 7.658174878582 -0.800520076541967 0.197657600999263 AT5G52450_at 7.37965948493546 7.30674567302822 9.3237184244849 8.95936420558273 9.5074639514938 9.01459711759263 7.44369213499674 7.2234263693609 4.70671592752865 5.73987624346112 5.9004270668117 4.88145125118143 7.34152045529954 6.48111094895548 5.23528423666375 7.70215940100559 7.7462435298179 6.23719453119383 4.77926297432794 0.241376338884630 0.239810468897867 0.240221330883929 0.247428767677898 0.240416337038662 0.250917689001257 0.244797459592939 0.236667033988817 0.256127572602416 0.236667033988817 0.246069221057327 0.240122960171919 0.241044768495706 0.24213974718280 0.242848845390682 0.24196145973995 0.239609773130673 0.241404779888262 0.253555270092949 5 0|5 /|- 21306450 21307165 21306777.333 21306124 21309088 - gene protein_coding_gene TRUE TRUE AT5G52450.1 MATE efflux protein-related similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT2G34360.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G73700.1); similar to Os04g0373400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052573.1); similar to MATE efflux family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65963.1); similar to Os06g0494400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057687.1); contains InterPro domain Virulence factor MVIN-like; (InterPro:IPR004268); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 0.582350555781469 5.51312529618617 0.000209955849726796 0.877615451858006 6.8199223789863 14.0278129082121 0.582350555781469 0.113414215460362 AT5G03560_at 3.93366385201628 4.30976843083016 5.19922649988134 5.33620616913865 5.30732315733001 5.09213909147253 4.63182980405666 5.07953607480601 3.97917347092051 3.91792452277373 3.84350415091399 3.57709338907595 4.29737152036259 3.66355632742136 3.59599080457778 4.53016460062615 3.94199392155018 3.32285058410051 4.34817571414390 0.248527172641066 0.245458344984056 0.242080253413762 0.248698257804150 0.24415161857206 0.249539597294778 0.244022305190411 0.249461773394693 0.247604096405070 0.241529106410162 0.242424487658285 0.242728791557232 0.256251419288942 0.247461215824183 0.259918759583236 0.239015610049175 0.249638835927787 0.255807143055363 0.244057332124897 5 5 - 900711 902562 901635.636 900459 902761 - gene protein_coding_gene TRUE TRUE AT5G03560.1 nucleobase:cation symporter similar to hypothetical protein LOC548731 [Xenopus tropicalis] (GB:NP_001015977.1); similar to Os08g0560600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062509.1) -0.575179205756335 -5.50859766054784 0.000211350008570243 0.883231685815045 6.81446344296985 8.8253734174121 -0.575179205756335 0.110397912721948 AT5G12150_at 9.27135866926457 9.52548341986098 9.4442008142399 9.48433077009883 9.99219931037756 9.74675679059108 10.0663502943032 10.0369033433194 10.2450028136715 10.4283359159198 10.9733572766608 11.0599174707524 10.6503282966265 10.6893724481912 10.6315908721060 10.8626217422458 10.1631222143204 10.8062691217610 10.3147139214319 0.0951722404361714 0.0960028399692672 0.0971286159417123 0.0920644611659075 0.094376292407995 0.0934866540115373 0.093845718251815 0.0922014109742299 0.103833070871694 0.0926821874097725 0.0924270217676686 0.0918700699777627 0.0918700699777627 0.0939078872697857 0.0961364456297765 0.0918700699777627 0.095626291091769 0.0979973171689412 0.0928182310007177 5 5 - 3924434 3925131 3924785.636 3924127 3930306 - gene protein_coding_gene TRUE TRUE AT5G12150.1 pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein similar to pleckstrin homology (PH) domain-containing protein-related / RhoGAP domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24580.1); similar to pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19390.2); similar to pleckstrin homology (PH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD73663.1); similar to pleckstrin homology (PH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD30338.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96033.1); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198) -0.484451864326183 -5.50790148124160 0.000211565251559072 0.883919621013804 6.81362373902022 20.2254095835107 -0.484451864326183 0.0617441375029922 AT5G53200_at 5.39882172731325 5.39790506358975 8.16550294634876 8.56111788110103 7.0015051972698 7.35312837357785 9.20091626897894 9.37207662186589 8.57744539498107 9.02172395455476 8.84577947220871 8.71582683469069 9.0471977844725 8.91951704981525 8.62234543086976 9.89940334335206 9.40382640092567 9.3961122980757 9.0334328288654 0.201548239097313 0.189405004266731 0.171764628004568 0.170856833719785 0.195202568766897 0.177356665863720 0.170053055363951 0.169963588526013 0.175316206382407 0.169969786241070 0.166669498675230 0.170175599844400 0.166669498675230 0.166669498675230 0.172396433966788 0.169025165382530 0.178951321239517 0.172753037323692 0.166669498675230 5 5|0 +|/ 21600158 21601128 21600757.222 21600000 21601371 + gene protein_coding_gene TRUE TRUE AT5G53200.1 TRY (TRIPTYCHON); DNA binding / transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G30420.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61200.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.544977596095339 -5.50554978091625 0.000212294074250908 0.886752348146042 6.81078656883659 16.5482643281398 -0.544977596095339 0.0962667399670444 AT5G20120_at 5.95184547801597 6.1845123356066 7.4449092461532 7.33245426968827 7.99394337519387 7.87767078725545 5.71246006275375 5.6894894231982 5.75142658175733 5.76268425087888 7.12391275715227 6.86820856006825 7.28281795408311 7.27259053695372 6.80998607068821 7.18213532333497 6.70398113414615 7.17195136491266 5.89731248928843 0.174217667595514 0.166949964608821 0.171048607765479 0.172182762838828 0.168676394520582 0.166559372285528 0.164172750791095 0.166007148997335 0.176410874515920 0.175854008098594 0.161290601724371 0.168291841596763 0.161538205630694 0.168180500608572 0.164083057288181 0.161290601724371 0.177506350771275 0.167435550077249 0.167024651559763 5 5|0 +|/ 6795975 6796899 6796559.889 6795368 6797174 + gene protein_coding_gene TRUE TRUE AT5G20120.1 similar to hypothetical protein MtrDRAFT_AC157983g12v2 [Medicago truncatula] (GB:ABE86509.1) 0.467327025121529 5.50364781822276 0.000212885475166022 0.889009744293307 6.80849125226537 13.2012884905543 0.467327025121529 0.0491995819398524 AT5G13740_at 8.63185810833265 8.57483722605064 7.51206944397988 7.39487515927999 10.2696295161174 9.80881469153965 8.15022731410745 8.06001641210735 9.71938664037536 9.55521541347638 9.29915981787009 10.0626497795293 10.3014107443586 10.1165785219432 9.79969273798408 10.6106818686026 9.83786701867386 7.73900869157799 9.6352349661499 0.194655711284575 0.185703094807235 0.198092697419502 0.197982329720544 0.191073799196512 0.189010611845068 0.19162172552385 0.182536429170607 0.183394035762136 0.1813664734872 0.181093933193196 0.184468985215015 0.185580382428227 0.188890352563123 0.186458274037131 0.192477382544228 0.195290277081035 0.199562532496997 0.188294681427714 5 5|0 +|/ 4435290 4436442 4435836 4432309 4436671 + gene protein_coding_gene TRUE TRUE AT5G13740.1 ZIF1 (ZINC INDUCED FACILITATOR 1); carbohydrate transporter/ sugar porter similar to ZIFL1 (ZINC INDUCED FACILITATOR-LIKE 1), tetracycline:hydrogen antiporter/ transporter [Arabidopsis thaliana] (TAIR:AT5G13750.1); similar to transporter, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21874.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Tetracycline resistance protein; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.52148135087742 -5.50191849806477 0.000213424718821077 0.891048201077995 6.80640372049898 18.2290377277234 -0.52148135087742 0.0843318283671583 AT5G10360_at 9.86789134417885 10.1794959255899 10.0324174300834 10.1995732842748 10.1439463557828 10.1046483904052 9.97224475902188 10.1025327234462 9.66463949018412 9.63477062773765 10.0185151198012 10.2005159811452 9.70359420414196 9.89165215558634 10.1921366856726 9.46096849294082 9.6204161467307 9.66135431224725 9.37494017553927 0.109964665874146 0.109860985375050 0.107611091879858 0.112126903821256 0.112152133160329 0.107530701671102 0.107853148058425 0.112979828417826 0.114300096493921 0.110437808048316 0.115070465658479 0.108097694249086 0.112573653703967 0.112745723794245 0.113460032849156 0.109880003660413 0.117152575960686 0.109990103057252 0.114881126389382 5 5|0 -|/ 3258795 3259453 3259085.3 3258475 3260230 - gene protein_coding_gene TRUE TRUE AT5G10360.1 EMB3010 (EMBRYO DEFECTIVE 3010); structural constituent of ribosome Identical to 40S ribosomal protein S6-2 (RPS6B) [Arabidopsis Thaliana] (GB:P51430;GB:O04670;GB:Q9LX91); similar to RPS6 (RIBOSOMAL PROTEIN S6), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT4G31700.1); similar to 117M18_18 [Brassica rapa] (GB:AAZ66937.1); contains InterPro domain Ribosomal protein S6e; (InterPro:IPR001377) -0.488939341895005 -5.49394419257923 0.000215930206388960 0.901292681467518 6.79677068102159 19.776224227483 -0.488939341895005 0.0655687150055043 AT5G05000_at 7.03763449670425 7.35553359508792 7.17322050804884 7.18173188708646 7.77556654758942 7.40690922434163 7.37594039690175 7.00962191444637 7.29441784832585 7.08275904779249 7.93357502966615 8.17228740490999 7.59253557884373 7.99889660952134 8.09312182872814 7.95367420727588 7.67422093575301 7.67890023625167 7.27672850568579 0.135994095331148 0.134424055505522 0.133993384154301 0.139659780058627 0.134239684703011 0.13381516521178 0.138667931472074 0.136330628906424 0.144423242073954 0.134819887740052 0.136329495977456 0.136581593088278 0.134092546161891 0.133638951847352 0.132814153502908 0.135952924469497 0.142431644228927 0.142605683805025 0.140387791997134 5 5|0 -|/ 1474276 1475089 1474722 1474114 1476410 - gene protein_coding_gene TRUE TRUE AT5G05000.1|AT5G05000.2|AT5G05000.3 ATTOC34/OEP34 (Translocase of chloroplast 34) Outer membrane protein that may function in import of nuclear encoded proteins into the chloroplast. Identical to Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa chloroplast outer envelope protein) (GTP-binding protein OEP34) (AtToc34) (TOC34) [Arabidopsis Thaliana] (GB:Q38906;GB:Q8L9G5;GB:Q9FF74;GB:Q9GDD2); similar to TOC33 (PLASTID PROTEIN IMPORT 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G02280.1); similar to AAA ATPase; Chloroplast protein import component Toc34 [Medicago truncatula] (GB:ABD28666.1); contains InterPro domain AIG1; (InterPro:IPR006703); contains InterPro domain Chloroplast protein import component Toc34; (InterPro:IPR005688) -0.562629378395589 -5.4912507599873 0.000216783538295996 0.904637705309192 6.79351441235168 14.8420797943442 -0.562629378395589 0.105439826939564 AT5G10170_at 4.9082968034346 5.47284341020463 4.13361605100577 4.67575270337183 4.12062111693751 4.06224585533272 4.62409114607838 5.23405124098429 2.90954701620480 3.36809335678104 3.91158389731206 3.90940603743546 4.09244073250903 4.82261576534385 3.95467534383599 5.28320384848882 4.82172287004082 4.20638297255249 3.95225355773093 0.240485019514882 0.233891476890933 0.254918757443099 0.239474619863052 0.236125729842433 0.251447212394707 0.238046472139195 0.234388998923464 0.254384203962123 0.243774436439338 0.233891476890933 0.23806722464779 0.244602920000947 0.243205451390191 0.239881410340015 0.240636854345311 0.243874237316962 0.244359609338371 0.241153043488867 5 5|0 -|/ 3187567 3188455 3187954.9 3187278 3190252 - gene protein_coding_gene TRUE TRUE AT5G10170.1 inositol-3-phosphate synthase, putative / myo-inositol-1-phosphate synthase, putative / MI-1-P synthase, putative Identical to Probable inositol-3-phosphate synthase isozyme 3 (EC 5.5.1.4) (Myo- inositol-1-phosphate synthase 3) (MI-1-P synthase 3) (IPS 3) [Arabidopsis Thaliana] (GB:Q9LX12); similar to MI-1-P SYNTHASE (Myo-inositol-1-phosphate synthase), inositol-3-phosphate synthase [Arabidopsis thaliana] (TAIR:AT4G39800.1); similar to inositol-3-phosphate synthase isozyme 2 / myo-inositol-1-phosphate synthase 2 / MI-1-P synthase 2 / IPS 2 [Arabidopsis thaliana] (TAIR:AT2G22240.1); similar to Inositol-3-phosphate synthase (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) (GB:Q9LW96); similar to 4D11_18 [Brassica rapa subsp. pekinensis] (GB:AAZ67532.1); similar to Inositol-3-phosphate synthase (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) (GB:Q9SSV4); contains InterPro domain Myo-inositol-1-phosphate synthase, GAPDH-like; (InterPro:IPR013021); contains InterPro domain Myo-inositol-1-phosphate synthase; (InterPro:IPR002587) -0.725600882481374 -5.4879066409425 0.000217848025769996 0.908861963512424 6.78946967568422 8.54654907942475 -0.725600882481374 0.172020514995002 AT5G04240_at 6.58986886885928 6.77010417493017 7.21968746406792 7.27250821743047 7.49059545264648 7.22555919766182 7.18293510070728 6.63259571546462 6.4918487998723 7.08055805664238 7.24823204265515 7.46095630264931 7.54225558265632 7.10455241116033 6.87697237257434 7.67825278083442 6.99903031008422 7.14627481647155 6.98358153685634 0.137229343789004 0.141837803456138 0.137296791630017 0.137070002367712 0.141544541183201 0.141715285399024 0.134511673452178 0.136722311712349 0.146137298441304 0.141939869418527 0.137390787764888 0.136949128454267 0.137570776348012 0.143135056771260 0.138782572864134 0.145340145570333 0.152792149043645 0.147798297613468 0.136497574208971 5 5 + 1174246 1174602 1174424.091 1169545 1174879 + gene protein_coding_gene TRUE TRUE AT5G04240.1 ELF6 (EARLY FLOWERING 6); transcription factor Encodes a jumonji-class transcription factor that acts as a repressor in the photoperiod pathway. similar to REF6 (RELATIVE OF EARLY FLOWERING 6), transcription factor [Arabidopsis thaliana] (TAIR:AT3G48430.1); similar to Transcription factor jumonji, jmjC; Transcription factor jumonji, JmjN; Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE87817.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Transcription factor jumonji, JmjN; (InterPro:IPR003349) -0.572962106816317 -5.48329638313257 0.000219324690558766 0.914803284320613 6.78389024667375 14.1025127532257 -0.572962106816317 0.110591605233476 AT5G18310_at 10.1899795344486 10.0679994399404 10.9021239074213 10.8950914370877 11.1760788466433 10.6215530789223 8.31627187360787 8.23538203165435 8.84793234425471 8.56554604773813 9.72431794624704 9.56999773184686 9.32400454021087 9.55444104233715 8.83659686485815 9.52222967428585 9.45730851608297 9.4081122525717 8.37996457985557 0.116607089386973 0.121832991813698 0.123917095008329 0.120507839679914 0.120187753126381 0.129022614552848 0.124640213055277 0.124579239323899 0.124418687000749 0.13024017467953 0.116607089386973 0.119363701518465 0.126911039079306 0.119759163166619 0.12872745261364 0.118198659569109 0.119835049096612 0.123540313062654 0.126540485296379 5 5|0 +|/ 6062178 6062889 6062632.7 6061702 6063150 + gene protein_coding_gene TRUE TRUE AT5G18310.1|AT5G18310.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48500.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90369.1) 0.548698840037052 5.48165815942625 0.000219851979459726 0.916782754347055 6.78190671664055 19.061780216218 0.548698840037052 0.0992571604256136 AT5G07860_at 6.57584401594881 6.8609223425495 6.5861141089899 6.39504201015192 6.29221656050431 6.60940687941569 6.03847677001106 5.51230954288981 5.40537518988418 5.49837810435756 6.17256172260204 6.45465222106137 5.71831094782551 6.10699958954029 6.3017272329801 6.56894252645836 6.40820462945618 6.32506574432207 5.87929620509633 0.204900789498048 0.203167978916140 0.203211783782683 0.209144416996679 0.201936333101094 0.205709470606208 0.205183781862547 0.204374702970726 0.213997653932884 0.209815732168997 0.212904196150659 0.202575858779347 0.20024140805166 0.204011354633023 0.219165731007866 0.198536711408750 0.206590661552582 0.203481753057767 0.208503657904419 5 5 + 2512411 2512894 2512598.727 2511443 2513096 + gene protein_coding_gene TRUE TRUE AT5G07860.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07870.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.595314547100281 -5.45680800121221 0.000228018273679781 0.950608182971006 6.75175957180713 12.2844954837543 -0.595314547100281 0.121784242472778 AT5G63640_at 6.1601469847083 6.47162014354953 7.59546322329792 7.69393488639952 8.39375951031296 8.03045088288537 6.16933791526526 6.49791224721384 5.92136973821559 5.03632173314445 6.76952622938827 6.67295740131781 7.19084486660842 7.31583429195552 6.44232057649199 7.0290427784641 7.16427257759465 7.48712405199287 5.30884787391236 0.173429796993841 0.172717096683015 0.178089592863650 0.177695392364738 0.173270858512625 0.178417753517272 0.171848152668703 0.169057587123072 0.181440014531365 0.175484620258063 0.171539555638265 0.169806968688574 0.169057587123072 0.174895165451840 0.175863331470525 0.178410064949756 0.173938588335091 0.173103624764955 0.179388400436488 5 5 + 25497784 25498393 25498088.727 25494972 25498715 + gene protein_coding_gene TRUE TRUE AT5G63640.1 VHS domain-containing protein / GAT domain-containing protein similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76970.1); similar to GAT; ENTH/VHS [Medicago truncatula] (GB:ABE83690.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain VHS; (InterPro:IPR002014); contains InterPro domain ENTH/VHS; (InterPro:IPR008942) 0.550813755935494 5.44858271878838 0.000230791998187433 0.96194104844522 6.741756599136 13.3421632884462 0.550813755935494 0.101891794962103 AT5G06950_at 4.35119775886736 4.48380797775746 5.46346037719131 5.6977205245344 6.40130138393885 5.96962326711611 4.39728323971039 4.0154700419613 3.20723304733242 3.53507373582855 4.89454773038553 4.21002720156398 4.49737818434468 4.38254745178997 4.77642757487214 5.04701815047031 5.35038934892047 4.34430614741940 3.47213429767293 0.222583274441696 0.231360298258715 0.235156730539295 0.22867682655087 0.222583274441696 0.227608868688388 0.228771594028701 0.233354980151897 0.242824285279934 0.231270241373366 0.226640261854238 0.229272431258781 0.222583274441696 0.234678687004351 0.222583274441696 0.22736499314916 0.225132250228364 0.222583274441696 0.222583274441696 5 5|0 +|/ 2153390 2154137 2153788.1 2151026 2154554 + gene protein_coding_gene TRUE TRUE AT5G06950.1|AT5G06950.2|AT5G06950.3|AT5G06950.4 AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor|AHBP-1B (bZIP transcription factor HBP-1b homolog) Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment. Identical to Transcription factor TGA2 (HBP-1b homolog) (AHBP-1b) (AtbZIP20) (TGA2) [Arabidopsis Thaliana] (GB:P43273); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to leucine zipper (GB:AAC37470.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.567462284942938 5.44139859857081 0.0002332440437468 0.971927930292916 6.73300987194002 9.1438050300507 0.567462284942938 0.110075635869330 AT5G15230_at 9.15439058522332 9.10455984988417 7.89880342474604 7.94312712103848 8.45562409926801 8.4109652198957 8.76221201945164 8.85945115006128 7.29681592388132 8.37203897670429 10.0895246061394 10.2374951349843 8.96355533533591 9.38669755765866 10.3795109417242 8.98230247782856 8.18341710907566 9.71651111255726 8.11769709633323 0.144513280170802 0.137972670687891 0.157551732703306 0.156192588848387 0.141660147989269 0.148900505998373 0.143119397724613 0.139720402543406 0.157367740097704 0.146346584425281 0.137198020268154 0.137198020268154 0.151862212764402 0.142721150556355 0.144074851428295 0.140550045579281 0.167190915623956 0.149872505074838 0.140753728902144 5 5|0 +|/ 4945030 4945972 4945736.25 4944903 4946219 + gene protein_coding_gene TRUE TRUE AT5G15230.1|AT5G15230.2 GASA4 (GAST1 PROTEIN HOMOLOG 4) gibberellin-regulated (GASA4) Identical to Gibberellin-regulated protein 4 precursor (GASA4) [Arabidopsis Thaliana] (GB:P46690;GB:O49593); similar to gibberellin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G74670.1); similar to (GB:AAA74480.1); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854) -0.437570471699146 -5.43786706452254 0.000234459570934039 0.976758572511207 6.72870680150631 17.2842554087224 -0.437570471699146 0.0218196858423088 AT5G49360_at 11.0802038065427 11.2191110170338 12.8523273571571 12.8583894166319 13.0661723886293 13.0753370707211 11.5603938647368 11.5010054074791 11.7442777114987 11.5869591175055 12.1064596132448 10.6906606554929 12.4011415176955 12.3312931995382 10.9410359226564 12.0967915929477 12.5590241665481 12.0131126030144 11.5438963514969 0.0728555194576824 0.0728555194576824 0.0766947238379173 0.0754662418729857 0.0753106333827472 0.0763933402996922 0.0756981186045137 0.0750828865039138 0.0809220009152925 0.074459585987885 0.073766469239789 0.0741497661128395 0.0746857407280265 0.0755629925770113 0.0742593033722557 0.0737997997245043 0.0769178438405962 0.0731141584447911 0.0753589239330164 5 5 - 20029408 20029918 20029682.909 20029105 20033968 - gene protein_coding_gene TRUE TRUE AT5G49360.1 BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds encodes a beta-xylosidase located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL2 (BETA-XYLOSIDASE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G02640.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to alpha-L-arabinofuranosidase / beta-D-xylosidase [Pyrus pyrifolia] (GB:BAD98523.1); similar to beta xylosidase [Fragaria x ananassa] (GB:AAS17751.2); similar to auxin-induced beta-glucosidase [Chenopodium rubrum] (GB:AAP83934.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.440196630835487 5.43711629890362 0.000234718847634548 0.977604000397892 6.72779172696755 23.9103596923128 0.440196630835487 0.0262124648488042 AT5G57880_at 2.83602834645096 2.89280027898631 3.67114470251959 3.4668424769526 3.85638989280261 3.66459911700126 2.9461768497255 2.87211907507857 2.79117785506558 2.76153436864476 3.59003552421646 4.64998432589743 4.09216035614006 4.43416157862612 4.40392861477346 4.4073031552101 4.09143437475209 4.2169499888566 3.26845603424168 0.219140225408799 0.219089831491510 0.219089831491510 0.219089831491510 0.233472627878011 0.228998933557812 0.230894115597955 0.219089831491510 0.226290820723487 0.239112504855492 0.225004973849572 0.219089831491510 0.219089831491510 0.227350590799452 0.235176822875251 0.219089831491510 0.219089831491510 0.219089831491510 0.219089831491510 5 5 + 23462707 23463582 23463154.111 23461203 23463665 + gene protein_coding_gene TRUE TRUE AT5G57880.1 similar to unnamed protein product; gene_id:MTI20.12 unknown protein [Medicago truncatula] (GB:ABE78807.1) 0.463586313599950 5.43235001664228 0.000236372024125047 0.984253108456696 6.72197995780762 6.86382967200286 0.463586313599950 0.0511114268524994 AT5G04220_at 7.95936553697839 8.08078413878804 8.19052038550494 7.55881712835997 8.86434232097004 8.30049788507224 6.91622467425898 6.8695492724179 6.6349266864214 7.26121002651782 6.60884023397396 7.2402861309712 6.75209866863345 7.50694471431835 6.15264113035143 7.13816178946179 6.98273390845839 5.95813088830023 6.72170636565729 0.23084073985693 0.228331327444312 0.236849236263104 0.229718215566684 0.229706529595748 0.243467122891243 0.231923215504706 0.233141473008932 0.245301696420429 0.235322694203454 0.232998408713492 0.227140377218981 0.230322165519971 0.231531729130629 0.228085069208987 0.230768444911798 0.23230680127108 0.228756547122843 0.232463249787143 5 5|0 -|/ 1155995 1156721 1156371.2 1155866 1158878 - gene protein_coding_gene TRUE TRUE AT5G04220.1|AT5G04220.2 C2 domain-containing protein (sytC) similar to C2 domain-containing protein (sytA) [Arabidopsis thaliana] (TAIR:AT2G20990.1); similar to C2 [Medicago truncatula] (GB:ABE85279.1); similar to Os06g0685300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058398.1); similar to Os02g0448400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046755.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973)|similar to C2 domain-containing protein (sytA) [Arabidopsis thaliana] (TAIR:AT2G20990.1); similar to C2 [Medicago truncatula] (GB:ABE85279.1); similar to Os02g0448400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046755.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.656307293193474 -5.43093519657247 0.000236865136320225 0.986069562501097 6.72025401069316 14.6750596890892 -0.656307293193474 0.14825145941791 AT5G01800_at 8.73263001892581 9.15441725317596 9.88063151336789 10.0655036586678 10.231957100075 10.0524347409352 8.83154729886287 8.90107351725342 7.83170937837352 8.14384465886552 9.56304437079496 9.31535578867119 9.84420115217667 9.64888883978903 9.10278462405705 9.67170203124496 9.85294891280769 9.33685514008561 8.48030377194994 0.142914000105239 0.134171319235619 0.137175585297289 0.139309921747426 0.145363820327523 0.140220296776541 0.134661942541974 0.13939948171034 0.161507012962211 0.154984360933528 0.143755376277648 0.141537316736441 0.138811532084426 0.146961856317393 0.134953871746872 0.135337246034838 0.140905455956289 0.133670546442004 0.15129848083777 5 0|5 /|+ 307776 308606 308134.333 306965 308905 + gene protein_coding_gene TRUE TRUE AT5G01800.1 saposin B domain-containing protein similar to saposin B domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G51730.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAW57783.1); contains InterPro domain Saposin-like; (InterPro:IPR011001); contains InterPro domain Saposin B; (InterPro:IPR008139); contains InterPro domain Saposin-like type B, 2; (InterPro:IPR008138); contains InterPro domain Saposin; (InterPro:IPR008373); contains InterPro domain Saposin-like type B, 1; (InterPro:IPR007856) 0.517808519857084 5.42343159813485 0.000239498776121818 0.996793906219006 6.71109431708202 18.3282369929162 0.517808519857084 0.0863791313822688 AT5G11630_at 6.68481080716807 6.89126651715473 6.80275938374433 7.320566335516 6.79877421013212 6.82159594712355 6.52533646312144 7.02729425980458 5.13065000055405 4.31672600017724 5.13780399836934 5.74140897885098 5.25162678834144 5.36012731989241 5.74545144437823 5.64755443814438 5.91090316596462 5.06197578931338 4.94565382438333 0.196519396551174 0.199581205421722 0.195031523154712 0.191307224300550 0.193980095176933 0.198870134014621 0.195759335804127 0.192878457566052 0.195918462576752 0.194515492124982 0.191307224300550 0.191307224300550 0.200049171665561 0.197545220003602 0.201893710613385 0.192766304823643 0.192365377623701 0.200224383575092 0.191307224300550 5 5|0 +|/ 3740548 3740877 3740718.222 3740461 3742140 + gene protein_coding_gene TRUE TRUE AT5G11630.1|AT5G11630.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17310.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78369.1)|similar to transcription factor [Arabidopsis thaliana] (TAIR:AT4G17310.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78369.1) -0.61029043559429 -5.42150839066256 0.000240178800866786 0.999383990406696 6.70874501606584 11.9989420398598 -0.61029043559429 0.129875243617672 AT5G16240_at 5.7922815084348 6.5805453396905 5.12297752774247 5.80410517858114 6.40894843525932 6.73706476929217 6.83361872128822 7.50065994360665 4.98414832450482 5.93076234242954 7.33631092131086 7.10468313323776 6.76580685243788 6.92930118927285 6.23123809654159 6.02037879239468 6.73526754827187 6.63359727530129 6.12937270370919 0.248760861843087 0.230905716801764 0.258285449296032 0.232930919257992 0.237789346942897 0.23405910970661 0.233640373591785 0.236938600047486 0.264245588110923 0.226773702928234 0.234404501924422 0.238514138742385 0.225120272907719 0.230415559811236 0.226011465375761 0.231091923689557 0.236632774818669 0.238023804427839 0.225266811611013 5 5 + 5308861 5309518 5309061.182 5306810 5309935 + gene protein_coding_gene TRUE TRUE AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative similar to acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative [Arabidopsis thaliana] (TAIR:AT3G02630.1); similar to stearoyl-acyl carrier protein desaturase [Linum usitatissimum] (GB:CAA07349.1); contains InterPro domain Fatty acid desaturase, type 2; (InterPro:IPR005067); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) -0.854003603913497 -5.41871826827711 0.000241169016147347 1 6.70533555056512 12.5480255611422 -0.854003603913497 0.221476104167105 AT5G23300_at 4.45332321598682 4.13609796230705 4.43068518270866 4.66396407400393 4.31403860368838 3.9727960942755 4.06146224747965 4.29628447480971 3.89727150524273 4.080304055924 4.04251610240833 4.40567806956882 4.22329202154208 4.13267079033284 4.24758291829682 4.23772225742111 4.10954212647919 4.47057452205954 3.61285848223467 0.184928345595986 0.190980847214468 0.195970698725097 0.196653072771987 0.184928345595986 0.202779041666838 0.188592975479337 0.197802121882502 0.197779535177191 0.192694122263024 0.189744220597735 0.189290716952055 0.187396118781256 0.184928345595986 0.192783466019614 0.186316569090673 0.197043238182762 0.197671270993518 0.191719919447774 5 5 - 7847978 7848886 7848450.636 7847590 7850407 - gene protein_coding_gene TRUE TRUE AT5G23300.1 PYRD (PYRIMIDINE D); dihydroorotate dehydrogenase dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis Identical to Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (PYRD) [Arabidopsis Thaliana] (GB:P32746;GB:Q9FMX1); similar to dihydroorotate dehydrogenase [Oryza sativa (japonica cultivar-group)] (GB:BAB11988.1); similar to Os04g0676300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054255.1); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain Dihydroorotate dehydrogenase; (InterPro:IPR001295); contains InterPro domain Dihydroorotate dehydrogenase 2; (InterPro:IPR005719) -0.541133347181999 -5.41321276182797 0.000243135701753215 1 6.69860384464705 8.33966916464782 -0.541133347181999 0.0989047648099407 AT5G61260_at 1.77805871831851 1.82501632409254 2.50319662535353 2.39431698822987 2.53779793065387 1.87170864560519 0.621760831770685 0.703394560522361 1.27741262630864 0.966972446449001 1.7120990185492 1.86570069062834 1.06828251727718 1.40286990125481 1.68859659030723 1.52399954143771 1.02953524977607 1.77267771061908 1.40139021900116 0.223142682171472 0.226512812011319 0.234574852141640 0.222794838162358 0.223267241456661 0.227870210333532 0.224044478904225 0.226243709477536 0.228497638739747 0.222948681433070 0.230386063081718 0.222019822853427 0.222019822853427 0.226831788260436 0.230459028873278 0.222862527629941 0.225284046939527 0.235328996319077 0.231453668544613 5 5 + 24655227 24655801 24655513.909 24654335 24655825 + gene protein_coding_gene TRUE TRUE AT5G61260.1 chromosome scaffold protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07820.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to HMG box family protein [Tetrahymena thermophila SB210] (GB:XP_001033066.1); similar to Micronuclear linker histone polyprotein (MIC LH) [Contains: Micronuclear linker histone-alpha; Micronuclear linker histone-beta; Micronuclear linker histone-delta; Micronuclear linker histone-gamma] (GB:P40631); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.581747348685551 5.41243143945463 0.000243416188333735 1 6.69764806293822 3.14102061960205 0.581747348685551 0.117931235753064 AT5G48330_at 3.32242282197703 3.07399958537846 3.78677040086394 3.26776593837885 3.68373695990048 3.68184206178727 3.82077355999407 3.44030681757304 2.93959795539077 3.61565027955588 3.00751738498625 3.32270998790414 3.06234524613850 3.5131391850582 2.90128121879239 3.0376152221214 3.34959621957667 3.10073889199679 3.64457902395643 0.220119215696765 0.216940797196876 0.225105183799656 0.22088775311333 0.221260216772703 0.228917403614782 0.226939895597495 0.217269972446867 0.218033109251696 0.227593548897554 0.216178304659313 0.216178304659313 0.221785012558114 0.224932357323437 0.222958457984118 0.226354852850629 0.227257933701135 0.219862197278022 0.216592632416859 5 5|0 +|/ 19604365 19604914 19604677.9 19603162 19605067 + gene protein_coding_gene TRUE TRUE AT5G48330.1|AT5G48330.2 regulator of chromosome condensation (RCC1) family protein similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to Os02g0197500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046199.1); similar to regulator of chromosome condensation, RCC1 [Chloroflexus aggregans DSM 9485] (GB:ZP_01516064.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091)|similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to Os02g0197500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046199.1); similar to BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1] (GB:ZP_01462040.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) -0.584288709119569 -5.40585868040985 0.000245789430668593 1 6.68960334687729 6.79060743783472 -0.584288709119569 0.119374891980995 AT5G10700_at 4.13111389804879 4.45424713753577 5.18165999424536 5.04763056034917 5.21818326217323 5.67695571269737 3.17905221361014 3.81573935212963 4.20514734624177 3.80171594363350 5.51037652262662 5.48498270670756 5.65632028544567 5.63194955330721 5.97343337191982 5.74676012164738 5.41289149106756 5.22604434687723 3.71115038167527 0.2100223314969 0.2100223314969 0.2100223314969 0.216303919130437 0.2100223314969 0.213882356267659 0.216542297256037 0.215512289776111 0.231855248617199 0.228032567369180 0.213772791345383 0.214730594365479 0.218099139285481 0.220432321244932 0.213774707858073 0.2100223314969 0.210514598988954 0.21665275129944 0.224026833012238 5 5 - 3378260 3378822 3378627 3378054 3378868 - gene protein_coding_gene TRUE TRUE AT5G10700.1 protein tyrosine phosphatase similar to hypothetical protein LOC563207 [Danio rerio] (GB:NP_001025446.1); similar to Os04g0605200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053793.1); contains InterPro domain Low molecular weight phosphotyrosine protein phosphatase; (InterPro:IPR000106) 0.654239678730831 5.40475974549007 0.000246188624833003 1 6.68825754990144 9.33124744491538 0.654239678730831 0.148688266367573 AT5G02470_at 4.31707125601581 4.52971390369959 6.27567304952794 6.029242741059 6.17549692855164 5.43370253788523 4.98090246863141 3.83220012448867 3.58393650728686 3.92143537842998 5.69592433765423 6.09457073131084 5.63828310246899 5.54260512660567 5.80688540168376 5.9534642424233 6.2929724878302 5.7556396740015 3.68242507095162 0.262661822631414 0.2658458420947 0.270508153677679 0.272218152042885 0.266987694824821 0.27372168934306 0.268072948657137 0.277417528700529 0.284254417004911 0.275739940639484 0.261492787252223 0.261950000589792 0.267365073514233 0.270848950801517 0.27121951682253 0.263642594046234 0.279208414738171 0.275091152550646 0.272840354228162 5 5|0 -|/ 542561 543576 542850.4 542356 544898 - gene protein_coding_gene TRUE TRUE AT5G02470.1|AT5G02470.2|AT5G02470.3 DPA; transcription factor core cell cycle genes similar to DPB [Arabidopsis thaliana] (TAIR:AT5G03415.1); similar to transcription factor DP1 [Populus tremula x Populus tremuloides] (GB:AAQ13675.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.914399132813231 5.40098971084361 0.000247563367237226 1 6.68363897410386 9.98515477134248 0.914399132813231 0.243246215707472 AT5G42240_at 7.2470700440602 7.36268992990863 7.68488143537066 7.53516447850494 8.34678551018984 8.03380341206798 7.80248571150608 7.45426616732446 7.20843606158767 7.31009988029825 7.66191768638754 8.22761168564374 7.9621314556487 7.69735479585831 7.56237455500318 8.10231244575463 8.05319686277102 7.2870361768086 7.5556518907481 0.188707478748425 0.170777218670108 0.191050757366125 0.201644500113119 0.182755391363406 0.191437071950542 0.187048504122473 0.183314772496363 0.194572309759390 0.186424456077385 0.180207256071561 0.184696762552644 0.176443336689206 0.177541831036956 0.183404194742233 0.173461388779024 0.200473013702339 0.184566053751315 0.177290675913955 5 5|0 +|/ 16907228 16908124 16907734.556 16905454 16908420 + gene protein_coding_gene TRUE TRUE AT5G42240.1 SCPL42 (serine carboxypeptidase-like 42); serine carboxypeptidase similar to SCPL43, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G12480.1); similar to SCPL41 (serine carboxypeptidase-like 41), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G42230.1); similar to SCPL44 (serine carboxypeptidase-like 44), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G43780.1); similar to Os11g0213600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067496.1); similar to Serine carboxypeptidase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93967.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) -0.517529173196477 -5.40090943795569 0.000247592727480912 1 6.68354060600343 15.2720456205478 -0.517529173196477 0.0873879394556202 AT5G39570_at 11.8159094075679 11.8452674422143 11.8470384237308 11.9476645276258 11.8693213929772 11.7083254790258 11.6716102792773 11.7856722588173 11.8515879375581 12.0386332108127 12.1187552966253 12.0215149000006 12.0853386684955 11.9452298907835 11.8071595023181 11.9978457502803 11.9605720919785 12.0321046981767 11.9126198627773 0.0776427916688041 0.0722750668489415 0.0764555499050181 0.0726926509988876 0.0730251495179667 0.0743315550220193 0.072180323552047 0.0713697283881546 0.0767992556287674 0.0731340362509687 0.0725831999888431 0.075658072675839 0.0732302107519111 0.073594161161363 0.0763267121929557 0.072266516333826 0.0739659900410533 0.0728713809138149 0.0727250277265115 5 5|0 +|/ 15862194 15863158 15862828.9 15861187 15863406 + gene protein_coding_gene TRUE TRUE AT5G39570.1 unknown protein -0.447318582308934 -5.40070394439853 0.000247667904762999 1 6.68328878455929 23.7765238698454 -0.447318582308934 0.0386641944609966 AT5G18770_at 3.48972521099283 3.10893305524612 4.65934143288119 4.41212233702398 4.92953962181576 4.83844248961708 3.48570670298397 3.18037242211456 2.67337823953492 2.95161526900195 4.11050939570078 3.57455751389141 4.0207521494022 3.55035982295867 3.84043420426592 3.75532657177491 4.29789624669546 3.77949106445318 2.99547593317518 0.227852669205299 0.227409255770655 0.233758260706687 0.235790622603099 0.233291947084093 0.236166337056552 0.229386764308526 0.233882064680627 0.242747266105073 0.236004492996466 0.230963734035319 0.227260982754399 0.227604596376234 0.233819575572394 0.229861576940138 0.232848663392033 0.236908604066574 0.236495797893435 0.251930285051254 5 0|5 /|+ 6262621 6263120 6262804.375 6261354 6263438 + gene protein_coding_gene TRUE TRUE AT5G18770.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G18780.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.533854321219122 5.3987929352183 0.000248368189332599 1 6.68094658072207 7.38285075160785 0.533854321219122 0.0959864908130084 AT5G58620_at 2.61480358753155 2.66535970025748 3.46466438103925 3.71234708296613 2.85084433323579 2.88186676490739 1.94597556734290 2.08495326826552 1.93142812855849 1.98254510634158 2.36367948161773 2.77068076706295 2.16464088060926 2.59638041408490 2.47724955677512 2.49697380724658 2.71959717056271 2.5799136773199 1.91108211466987 0.208183908223014 0.208301411327618 0.2123477573496 0.221078410018573 0.206894255236577 0.213898423417132 0.21114695032815 0.209146573430569 0.220441886969444 0.213513034190907 0.206894255236577 0.209008559300224 0.214928071383641 0.21944785785424 0.206964017371064 0.207177072011086 0.215236458800511 0.211939042953648 0.212396558394362 5 5 + 23712419 23712839 23712625.727 23710566 23713448 + gene protein_coding_gene TRUE TRUE AT5G58620.1 zinc finger (CCCH-type) family protein similar to CZF1/ZFAR1 [Arabidopsis thaliana] (TAIR:AT2G40140.2); similar to Cys-3-His zinc finger protein [Capsicum annuum] (GB:ABI30334.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.459584663044728 5.39827524427939 0.000248558258708372 1 6.68031196646341 5.00901412865985 0.459584663044728 0.0502096669307411 AT5G54580_at 7.79363887538363 8.07008655206446 8.40276842450994 8.65161656721796 8.86900952798755 8.2887051847825 8.84095787076874 9.17995864989652 7.83871390992101 8.3832910775185 8.71981047550526 8.52647468529524 8.80240551353815 8.73297607772218 8.4255396248304 8.84759492165043 8.395644501454 8.3169119704698 8.41904785380645 0.131162581587784 0.137854991551220 0.140705097090281 0.138842326256730 0.132646544680883 0.150524423657468 0.140656597030971 0.134286935033701 0.144386506036907 0.135687119204923 0.131162581587784 0.131368174817855 0.131162581587784 0.137068256234798 0.133980743876009 0.135364841874381 0.138794101053974 0.142040372544154 0.134374917373675 5 5|0 +|/ 22188661 22189851 22189446.222 22188442 22190203 + gene protein_coding_gene TRUE TRUE AT5G54580.1 RNA recognition motif (RRM)-containing protein similar to RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G37510.1); similar to Os07g0549800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059935.1); similar to Os08g0139000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060964.1); similar to RNA-binding re (GB:ABE82094.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.614857330370165 -5.39785279823374 0.000248713473864729 1 6.67979407297696 16.9168947074382 -0.614857330370165 0.132928442659133 AT5G05840_at 4.52867428782549 5.0407014070782 6.83842142140941 6.73350916959807 7.44499136167694 7.192823592114 6.17164223912423 6.40555534681406 4.15094707605534 5.42226571081425 6.75695384358648 6.33185238527827 7.00828114904222 6.3684292099121 6.4061721894037 6.00989719035401 6.3734411146191 6.03616305494544 4.70634408811784 0.180739086419101 0.176623919617358 0.179457651346347 0.171494332353079 0.181951241451159 0.177197911699316 0.184748982915498 0.173627005585477 0.211456537208803 0.179813364632274 0.171494332353079 0.171494332353079 0.180704983835597 0.186260444122316 0.176037754883902 0.178881784826014 0.180255161074305 0.175494367066857 0.186111459682814 5 5 - 1757329 1757787 1757571.545 1757099 1760667 - gene protein_coding_gene TRUE TRUE AT5G05840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55720.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06886.1); similar to Os03g0267500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049665.1); contains InterPro domain Protein of unknown function DUF620; (InterPro:IPR006873) 0.55894181615573 5.39664309923552 0.000249158512878857 1 6.67831087716495 11.8801653826076 0.55894181615573 0.108277784515696 AT5G04290_at 6.45980705033984 6.05918127787689 6.77424923189985 6.42178785198599 6.76438813884283 6.58663963121279 5.61724812063506 5.27462053338031 6.2995422122716 6.37920878855277 6.4331846189433 6.52448468524749 6.34682092346879 6.77116229552476 6.3619828018843 6.83332023402153 6.40576163859316 6.65149482129765 6.45059545135158 0.165431911278595 0.159482393604959 0.157053844691680 0.162044523779724 0.167378503034105 0.157921456737284 0.174246639863993 0.178327631146161 0.170153278103288 0.163469981837140 0.165153070407704 0.159937543247432 0.157955008396359 0.163725499792626 0.160362343187204 0.155867357515974 0.160943799702928 0.159464881180865 0.167479479614905 5 5 + 1202104 1202613 1202367.636 1196070 1202654 + gene protein_coding_gene TRUE TRUE AT5G04290.1 KOW domain-containing transcription factor family protein similar to KOW domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT4G08350.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU43935.1); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain Bacterial NusG ribosomal protein; (InterPro:IPR003257) -0.571047190426652 -5.3945975273502 0.000249912993909196 1 6.67580223017906 12.703477889404 -0.571047190426652 0.113969107178375 AT5G05250_at 7.18975144366992 7.01241094069912 7.10352637946204 6.48554981296802 9.06822270470525 8.16036969701323 7.56643755894644 7.32463748240264 8.86129115578027 9.63542920613608 8.66907656645129 9.25413726234284 9.91500966905778 9.36290974246414 8.69797749307314 9.5062146911369 9.7392681662249 7.42488890314088 9.51931874513072 0.186470175191465 0.192388890800048 0.19103147178703 0.198001890350425 0.184854397590097 0.174149542673325 0.181679526150698 0.192774966422142 0.186641734752335 0.179497244949695 0.179295379754736 0.175392620153878 0.176787718128324 0.184480464028889 0.177494641513209 0.175581994001006 0.179379608264359 0.206896244531296 0.179970496995203 5 5 - 1557183 1557675 1557391.182 1557038 1557999 - gene protein_coding_gene TRUE TRUE AT5G05250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56360.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP03420.1) -0.780473596473948 -5.38990977573098 0.000251651199060481 1 6.67005043121753 16.6937957595261 -0.780473596473948 0.197009571006659 AT5G62430_at 8.05884041719813 8.27817549205288 8.99790714383879 9.12329959999189 9.22370774290023 8.93126193478437 10.5614098387258 10.4968581639425 8.71055583058201 9.5850593704958 10.1166356967075 10.2443017451518 10.4607575605452 10.103569807823 9.56686329207615 10.3220303514580 10.3098539616918 10.2192188965104 9.96164469823175 0.136906261904785 0.126146241058259 0.128070002170591 0.124664621987058 0.118968890253465 0.122292217720923 0.124374901245998 0.124115270073674 0.173121274688787 0.122019828342598 0.121907944628379 0.121530332024612 0.121941899569547 0.130060264499070 0.125802984229309 0.121803149786652 0.120995659436785 0.122521633738989 0.121352145162851 5 5 - 25086551 25087056 25086832.091 25086319 25088160 - gene protein_coding_gene TRUE TRUE AT5G62430.1 CDF1 (CYCLING DOF FACTOR 1); DNA binding / protein binding / transcription factor Dof-type zinc finger domain-containing protein, similar to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Represses expression of Constans (CO), a circadian regulator of flowering time. Interacts with LKP2 and FKF1. Expression oscillates under constant light conditions. Mainly expressed in the vasculature of cotyledons, leaves and hypocotyls, but also in stomata. Localized to the nucleus and acts as a repressor of CONSTANS through binding to the Dof binding sites in the CO promoter. Protein gets degraded by FKF1 in the afternoon. Identical to Dof zinc finger protein DOF5.5 (AtDOF5.5) (DOF5.5) [Arabidopsis Thaliana] (GB:Q8W1E3;GB:Q9FJJ9); similar to CDF3 (CYCLING DOF FACTOR 3), DNA binding / protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G47500.1); similar to AOBP (ascorbate oxidase promoter-binding protein) [Cucurbita maxima] (GB:BAA08094.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -0.481494545595413 -5.37216559803556 0.000258348197137930 1 6.64824281104183 19.0024278152287 -0.481494545595413 0.0678062121512715 AT5G11680_at 9.0182856908612 9.16242036131137 10.2233414614906 10.2729308592318 10.2048109164466 10.1946781692286 8.81501315845717 8.86368870022119 8.46073314304632 8.71731418854853 9.53883764116588 9.56857767016731 9.65289565743046 9.63127930411638 9.608948168307 9.75814488694585 9.74777506096777 9.43001342673577 8.43175185663787 0.127138814300341 0.129883423129835 0.130168881561962 0.128249029846535 0.135688180800269 0.132241816457759 0.134866838486057 0.132829914405993 0.1514805514601 0.143710687116682 0.126976390752595 0.129665685589163 0.126976390752595 0.13678353313871 0.12851326420813 0.129687548145360 0.126976390752595 0.130279522167238 0.138612290798479 5 5|0 +|/ 3759490 3760598 3760124.125 3758859 3760852 + gene protein_coding_gene TRUE TRUE AT5G11680.1 similar to hypothetical protein TTHERM_00502170 [Tetrahymena thermophila SB210] (GB:XP_001022271.1); similar to Os09g0512900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063646.1) 0.435830487404197 5.3703884531387 0.000259029306193438 1 6.64605557768709 18.6712255178513 0.435830487404197 0.0277459533485581 AT5G48730_at 5.36406056577261 5.82266960249072 5.76162200826294 5.91789561970744 5.63442298280563 5.61686484459488 5.64139723053116 5.64191354828289 4.87208125942598 5.51595952627927 5.935126135609 6.33040178191099 5.79847854094161 6.29855807259276 6.28172807871356 6.13304702284879 6.15300991042288 5.49362400576563 5.17859904192503 0.204888534399694 0.194213909929941 0.214115158586487 0.196138950606537 0.203143208189049 0.210579629989521 0.19778865327488 0.19470960184436 0.207458977533125 0.200808076043089 0.194213909929941 0.196392503916914 0.202482743007551 0.199191529032053 0.204866139617683 0.198728914456086 0.208912464135587 0.202462564964082 0.199285513404825 5 5 + 19781799 19782308 19782030.909 19780378 19782498 + gene protein_coding_gene TRUE TRUE AT5G48730.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G53170.1); similar to Os03g0115300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048751.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17033.1); similar to Os06g0172000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056939.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.508237193969615 -5.37038743250583 0.000259029697910381 1 6.64605432137292 11.2960441183781 -0.508237193969615 0.0839006856075633 AT5G62740_at 9.29986112127013 9.4464927845524 10.3365681713826 10.3664588120901 10.3353223048006 10.2398507083017 8.56118284246815 8.60751569681859 8.08114272922614 8.2136075775568 9.0155711965696 9.03231493597078 9.41691951671585 9.1528335166275 8.76839565842221 9.11802104804593 9.51461684492342 9.2222832463825 8.02271612652843 0.128749845706974 0.120163783667520 0.129332701751587 0.125988127232157 0.125928757775810 0.128982485751611 0.120431561386495 0.120459366741723 0.129177326595202 0.127745131254741 0.118674330224407 0.120786562338397 0.121984193259407 0.119126799999152 0.118562468140818 0.121395791174790 0.120536976523716 0.121496218414914 0.119994717948980 5 5|0 +|/ 25219053 25219724 25219537.3 25218173 25219982 + gene protein_coding_gene TRUE TRUE AT5G62740.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT1G69840.6); similar to hypersensitive-induced reaction protein [Capsicum annuum] (GB:AAS98165.1); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 0.438510367898966 5.36686266616087 0.000260386266287838 1 6.64171450944948 18.2796273751577 0.438510367898966 0.0317477986197628 AT5G45050_at 5.3772904029337 5.38461542423926 6.0362040743212 5.94036670789512 6.24697652009475 6.18571101658984 5.03785241882165 5.25952946942153 5.60686417513280 5.39506755885404 6.12122111860182 6.02551417123927 5.79294100755592 6.00077097934194 5.64554374883269 6.01617163935655 5.69574245559161 6.07878260680025 5.93305748885805 0.189127457355334 0.178091103371671 0.185001187568906 0.180062653225106 0.180977481773755 0.182668934611311 0.178982457516259 0.183690636652009 0.212506531529219 0.179750447944769 0.188666239992757 0.190064687578670 0.179500590551285 0.178091103371671 0.182350829361014 0.19295652141188 0.185383200707541 0.184030096578113 0.18312911076204 5 5 - 18194319 18194883 18194543.091 18194141 18199032 - gene protein_coding_gene TRUE TRUE AT5G45050.1|AT5G45050.2 TTR1 (WRKY domain family protein 16); transcription factor Encodes a member of WRKY Transcription Factor (Group II-e) that confers resistance to tobacco ringspot nepovirus. Identical to Probable WRKY transcription factor 16 (WRKY DNA-binding protein 16) (WRKY16) [Arabidopsis Thaliana] (GB:Q9FL92); similar to SLH1 (sensitive to low humidity 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81441.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable WRKY transcription factor 16 (WRKY DNA-binding protein 16) (WRKY16) [Arabidopsis Thaliana] (GB:Q9FL92); similar to SLH1 (sensitive to low humidity 1), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) -0.448854177830494 -5.36543194936963 0.000260939059408154 1 6.63995232471633 11.4671094410546 -0.448854177830494 0.0431363295614286 AT5G06210_at 7.70741253100178 7.55053464577159 8.44349374204401 8.63054243482816 9.35544558526966 9.11555658860897 6.84846976878842 7.27165723947268 7.11668394404941 6.53700860563803 8.49231189511801 8.0027956850781 8.32282812808555 8.2135008253484 8.1717970757279 8.71029053537703 8.08917721908099 7.86257433215695 6.85606832510413 0.199128660925900 0.196066900978935 0.217916476190924 0.204334709353727 0.213262638335563 0.211316658682355 0.196454228906026 0.208208751805152 0.212561028553276 0.209068028642325 0.196066900978935 0.196066900978935 0.197349712927359 0.199590584375536 0.202985451538974 0.196187343664628 0.213643497975320 0.205971660318892 0.208556540314498 5 5 + 1878535 1879476 1879104.455 1878472 1879741 + gene protein_coding_gene TRUE TRUE AT5G06210.1 RNA-binding protein, putative similar to GR-RBP5 (glycine-rich RNA-binding protein 5), RNA binding [Arabidopsis thaliana] (TAIR:AT1G74230.1); similar to RNA-binding protein precursor [Nicotiana tabacum] (GB:AAL07518.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.526887700327316 5.36390676635185 0.000261529728163564 1 6.63807338235959 15.6502622771034 0.526887700327316 0.0941888462040223 AT5G54940_at 12.3948870527363 12.2899429467474 13.4227424093912 13.2810068698996 13.1793700073336 13.0679491273363 12.5835794963025 12.3655552552590 12.0530519039269 12.3559015798469 13.4449694744771 13.0676435103794 13.3458541680587 13.1675616652374 12.9753947521305 13.5109461894252 13.2862544719373 12.9095096238627 12.2898081745347 0.0590517085236939 0.0574603702661017 0.0584054630824606 0.0602746426153379 0.0600728923212534 0.0607865688324224 0.0587878151817518 0.0587231598597488 0.0631807042564151 0.0599010621225136 0.0591515710227705 0.0573279689061144 0.0592964594074537 0.0581242528870618 0.0599534999218908 0.0573279689061144 0.0620073327998312 0.0603672438894164 0.0585324730482186 5 5 - 22325689 22325954 22325832.818 22325497 22326636 - gene protein_coding_gene TRUE TRUE AT5G54940.1|AT5G54940.2 eukaryotic translation initiation factor SUI1, putative similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT4G27130.1); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT5G54760.1); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT1G54290.1); similar to putative translation factor [Pinus pinaster] (GB:CAC84489.1); similar to Os05g0498400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055949.1); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874) 0.458009133746789 5.35112759944726 0.000266535102521465 1 6.62231370207856 25.5463477879798 0.458009133746789 0.052218771151639 AT5G18680_at 8.04991261762655 8.43745845324967 8.46007640781883 8.84427368062725 9.46014006457552 9.32182632000604 7.49162181562718 7.62447418663594 7.40749219935158 7.08845051004713 8.96900295956664 9.03472766335046 9.38360929019117 8.96771850164934 8.83190265331558 9.21053732203923 9.1433847721089 9.19635600693984 7.7557400607403 0.176128294837805 0.179445851874475 0.177471523486874 0.175826896632929 0.176295770772266 0.180806460204361 0.176797172659585 0.180483843118732 0.210954802902286 0.182816855043821 0.173419702215011 0.176321996076145 0.171484269829638 0.184154976780834 0.178987965229965 0.175939538092666 0.191281453370945 0.177575152325172 0.18695841362877 5 5|0 -|/ 6228395 6229091 6228630.4 6228167 6230539 - gene protein_coding_gene TRUE TRUE AT5G18680.1 AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor Member of TLP family similar to ATTLP9/AtTLP9 (TUBBY LIKE PROTEIN 9, TUBBY-LIKE PROTEIN 9), phosphoric diester hydrolase/ protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06380.1); similar to Tubby protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95936.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Tubby; (InterPro:IPR000007) 0.537153903612647 5.34939517798458 0.000267221472704406 1 6.62017496250748 16.7159141863666 0.537153903612647 0.100099784602664 AT5G11730_at 5.77406657155407 6.19614567804754 6.95449557262842 7.13609938010482 7.58441133631825 7.08301604029786 5.08811381881363 5.40711264302875 4.59865689905207 4.41200536969543 5.9445492992211 6.11501707460368 6.19672794435032 6.15255714693016 5.56890138176362 5.82778586580326 6.37197606437306 5.99700684523045 4.08704157542299 0.240671911924994 0.241316956876997 0.244328831479351 0.241167930494500 0.248442731979490 0.242221659752378 0.243182603786648 0.24474416289194 0.251486425540405 0.250116951365849 0.241535501964217 0.238884671421073 0.247577723748699 0.244951944127953 0.243809665362764 0.238884671421073 0.250584271970927 0.254991148266349 0.251095334645783 5 5 + 3781919 3782432 3782168.545 3780312 3782714 + gene protein_coding_gene TRUE TRUE AT5G11730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25970.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77886.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) 0.602260623352617 5.34764934112591 0.000267915061796922 1 6.61801911479796 11.5967908721865 0.602260623352617 0.129997139282706 AT5G59360_at 3.05139877881070 2.80743175868202 2.90315845893763 3.18377866530759 2.65806452799297 3.03737013170127 2.83016184126623 3.22718907347639 3.52566828054116 4.01802799933259 3.66601877456907 3.73625694417487 3.71799276260729 3.58115853381563 4.12604786331511 3.60095742100794 3.95133587921493 4.20481177341614 3.88116423405295 0.201993812584440 0.199233725004128 0.199683947024991 0.200321577605035 0.205299182268514 0.201502489768687 0.198607396164187 0.21627842197533 0.202396402306582 0.201765922233818 0.205299139596537 0.196816649941261 0.196816649941261 0.198861480091824 0.201264778966996 0.201713707248363 0.206359904518244 0.197584483909285 0.215048788330172 5 5 - 23962850 23963208 23963033.909 23962571 23963656 - gene protein_coding_gene TRUE TRUE AT5G59360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G28870.1) -0.567764561102585 -5.34726135070035 0.000268069463428978 1 6.61753993009824 6.77799882051719 -0.567764561102585 0.114761598104727 AT5G17230_at 10.8306445308412 10.8528471911001 11.0455705844706 11.0446979381650 11.1540114758159 10.7986084462577 11.7408015775574 11.6194799027408 11.8534246277338 11.6282157376716 12.0981207686411 12.2080476419236 11.7886009964749 11.9852585768216 12.3135673415197 12.2250307861460 11.6852934518735 11.8905083096447 11.4461480010687 0.0631985582420433 0.0617818663620966 0.0642933165193693 0.0657310346509226 0.0614794306390844 0.0693116377514779 0.0630850500464684 0.0613162588632854 0.0657493600472638 0.0632953842548954 0.0608060410046447 0.0608060410046447 0.0657996969523578 0.0608060410046447 0.0615973417840793 0.0608060410046447 0.0638126488961536 0.062815055301317 0.0637401201206204 5 5|0 -|/ 5659887 5660596 5660342.6 5659576 5662867 - gene protein_coding_gene TRUE TRUE AT5G17230.1|AT5G17230.2 PSY (PHYTOENE SYNTHASE); geranylgeranyl-diphosphate geranylgeranyltransferase|PSY (PHYTOENE SYNTHASE) Encodes phytoene synthase. Identical to Phytoene synthase, chloroplast precursor (EC 2.5.1.-) (PSY1) [Arabidopsis Thaliana] (GB:P37271;GB:O22375;GB:Q8LE86); similar to phytoene synthase (GB:AAA32836.1); contains InterPro domain Squalene/phytoene synthase; (InterPro:IPR002060); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) -0.47519198642633 -5.34725103759279 0.000268073568844691 1 6.6175271926016 22.9692825090129 -0.47519198642633 0.0651025991361825 AT5G13650_at 10.6929627179172 10.7344911798182 11.1856647540752 11.1692220185291 11.3770116772303 11.2005139442806 11.9673045393750 11.7870586371641 10.8333723866236 11.1756326777475 11.1782266584356 11.1299456325282 11.4807572156288 11.3024854089580 10.9576356924514 11.4917585285578 11.6011233932774 11.1502480804875 10.972817083945 0.0866376959814715 0.0831480636583467 0.0843393040037235 0.0843193568246327 0.0827625609823074 0.0839792629995253 0.083560291795368 0.0847666340785919 0.093572821688721 0.0827625609823074 0.0829660159109377 0.082787344874249 0.0827625609823074 0.0850716801164962 0.0855284624072685 0.08369457195105 0.0882380733278265 0.0881128695170236 0.0840724269449196 5 5|0 +|/ 4401091 4402233 4401671.5 4397749 4402695 + gene protein_coding_gene TRUE TRUE AT5G13650.1|AT5G13650.2 elongation factor family protein similar to GTP binding / translation elongation factor [Arabidopsis thaliana] (TAIR:AT2G31060.2); similar to Mitochondrial translation elongation factor Tu (ISS) [Ostreococcus tauri] (GB:CAL57456.1); similar to GTP-binding protein TypA [Trifolium pratense] (GB:AAR17698.1); similar to GTP-binding protein TypA [Herpetosiphon aurantiacus ATCC 23779] (GB:ZP_01425863.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Elongation factor G, III and V; (InterPro:IPR009022); contains InterPro domain Translation factor; (InterPro:IPR009000); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain Elongation factor G, C-terminal; (InterPro:IPR000640); contains InterPro domain GTP-binding protein TypA; (InterPro:IPR006298); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) -0.448272183264048 -5.34335896448732 0.000269627704645028 1 6.61271881054954 22.4045103297467 -0.448272183264048 0.0443354470014375 AT5G10440_at 1.87417852488258 1.83815945800694 3.75623878929047 3.37867937321222 2.47082956566409 2.42506985796714 2.09117455352286 2.01718088542670 2.48202320658934 1.96768302304208 2.56082313178807 2.58696952535057 2.46873428083874 2.34691661255881 2.74059673716828 2.53000057259515 2.93739869236298 2.93565816395750 2.15724863768281 0.278148440402798 0.266699831281613 0.289856375602564 0.278939321398453 0.273974875107822 0.266140856167485 0.260629181379715 0.260796896949928 0.288098613230519 0.2609823235266 0.266038889296935 0.260629181379715 0.276910235034246 0.260629181379715 0.276056001727423 0.266233975891317 0.279579341543522 0.264811218944185 0.277489936712599 5 0|5 /|- 3280656 3281596 3281206.5 3280517 3282412 - gene protein_coding_gene TRUE TRUE AT5G10440.1 CYCD4;2 (CYCLIN D4;2); cyclin-dependent protein kinase core cell cycle genes similar to CYCD4,1 (CYCLIN D4,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G65420.1); similar to cyclin D2.1 protein [Nicotiana tabacum] (GB:CAA09852.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.477943065942253 5.34046887250319 0.00027078794540672 1 6.60914654195389 4.90179162783775 0.477943065942253 0.0673397257221786 AT5G39960_at 4.10140381401317 4.24349903586961 4.52333307683024 4.34218844800471 3.95663809387321 4.36937252620146 4.33874115501581 4.25937342832251 3.50288784175183 3.44789298329601 4.21547128234455 4.11406976258515 3.89381195942599 3.65702312656648 4.40612591546284 4.46161842559351 4.50570356840632 3.57760342237809 4.01002512281815 0.256793774887801 0.254418106772186 0.258530665588576 0.269529420139568 0.26166739575929 0.260443271584747 0.262622893487955 0.260318270744690 0.267912105916323 0.257077707849966 0.252139405167839 0.252139405167839 0.252139405167839 0.255995249980112 0.254267897340089 0.252139405167839 0.252139405167839 0.25943665225624 0.253133943271232 5 5 + 16013296 16014013 16013746.818 16011423 16014048 + gene protein_coding_gene TRUE TRUE AT5G39960.1 GTP-binding family protein similar to EMB2738 (EMBRYO DEFECTIVE 2738), GTP binding [Arabidopsis thaliana] (TAIR:AT3G12080.1); similar to Os01g0225200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042458.1); similar to GTP-binding protein EngA [Zymomonas mobilis subsp. mobilis ZM4] (GB:YP_162188.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain GTP-binding; (InterPro:IPR005289) -0.502779266613534 -5.33093748510984 0.000274652179758994 1 6.59735471488699 8.14558390500002 -0.502779266613534 0.0829315390882633 AT5G51850_at 1.73628189043646 2.53583761897595 1.87035821175063 1.72613199447729 1.85558683132143 2.00287113825636 2.04964218635599 2.12122630426396 3.60118708821039 2.85939276758636 3.37466624052687 3.9082018593319 2.67197383508972 3.17387546170942 3.47041637792157 3.29372525067415 1.96320661627952 2.47926196116825 3.86201960322248 0.210114841203974 0.209927143902954 0.213260843297694 0.209219166045134 0.216364344599494 0.209219166045134 0.217037197078108 0.210413832455354 0.217864157808807 0.213126147221358 0.214096451537544 0.217210575976885 0.215989718997465 0.2146202490061 0.209219166045134 0.2149641009977 0.221460864661488 0.214205737831921 0.220646539045048 5 5 + 21098117 21098608 21098350.727 21096478 21098804 + gene protein_coding_gene TRUE TRUE AT5G51850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62170.1); similar to OSJNBb0085F13.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE02760.2); similar to B0616E02-H0507E05.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67833.1) -0.632065845381973 -5.32827491597557 0.000275742101274703 1 6.59405777595327 5.22863324031847 -0.632065845381973 0.143427504686651 AT5G58270_at 8.91849386855853 8.80634157617804 9.35312159920929 9.32132198986538 9.49912475717263 9.2065675099608 9.40289594102234 9.2924395596967 9.20590451084038 9.35404836643327 9.67649176509092 9.59709805426863 9.50226847560666 9.64423132290526 9.57342783899843 9.66106880496633 9.25314607070123 9.54182968849276 9.18937642341276 0.0858590772034726 0.0835437515233224 0.0922803442440238 0.0834206637216521 0.083587512012341 0.0877694632340839 0.0835997155865612 0.0822974039605185 0.0970298520805323 0.0818322346773107 0.0873779041297505 0.0816186840381298 0.0824225159320859 0.0834569335716863 0.0861779567437028 0.0816186840381298 0.0903111263442963 0.087466256698679 0.0816186840381298 5 5|0 +|/ 23582883 23584196 23583575.222 23579368 23584416 + gene protein_coding_gene TRUE TRUE AT5G58270.1 STA1 (STARIK 1); ATPase, coupled to transmembrane movement of substances Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. similar to ATM1 (Arabidopsis thaliana ABC transported of the mitochondria 1), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G28630.1); similar to ATM2 (Arabidopsis thaliana ABC transported of the mitochondria 2), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G28620.1); similar to PREDICTED: similar to ABC transporter-7, partial [Strongylocentrotus purpuratus] (GB:XP_782463.2); similar to PREDICTED: similar to ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Gallus gallus] (GB:XP_420301.1); similar to PREDICTED: similar to ABC transporter-7 [Strongylocentrotus purpuratus] (GB:XP_001187214.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.463113402727232 -5.3277227153818 0.000275968720182477 1 6.59337385117914 18.6280241933034 -0.463113402727232 0.0577545684856927 AT5G05440_at 5.11899309126295 4.84829500761088 3.50889282002201 3.42408968621885 4.96327358966436 5.33902030705836 2.81725122826572 2.4941469681919 4.30370595069734 4.05368402241372 5.01665041068658 4.00014974150697 3.42319293814400 4.18196337587547 4.091111662465 4.18400140010166 3.55791877788965 3.45773836038035 3.76067664461886 0.252343555636926 0.244816040035995 0.243811668731502 0.249920675656582 0.245253320135879 0.247955107109623 0.246557204534318 0.250418625905467 0.249166180880486 0.240339849052963 0.242589364886373 0.244431043918282 0.241604942690618 0.252046354457055 0.240339849052963 0.240953542109969 0.249214817906446 0.244160737754077 0.243640521539067 5 5 + 1609490 1609947 1609689.727 1609251 1610447 + gene protein_coding_gene TRUE TRUE AT5G05440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38310.1); similar to hypothetical protein [Nicotiana tabacum] (GB:CAI84653.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916); contains InterPro domain Streptomyces cyclase/dehydrase; (InterPro:IPR005031) -0.531875719365694 -5.32237697490229 0.00027817284738166 1 6.58675007852416 8.07846852359914 -0.531875719365694 0.0988157257382304 AT5G19850_at 7.30633357758774 7.0265374762501 8.36755980130323 8.19130361836978 7.86334458246411 7.66187050895375 9.01395357097567 8.67373742401459 7.8969749008043 7.89133370029408 8.47755963030432 8.18865409267383 8.42828133282012 8.64550575294914 8.38200514606496 8.6917861280411 8.61917660491499 8.41717339460313 7.32948223847 0.130682149945656 0.135541067365572 0.133436670503615 0.129226169542170 0.131730954333924 0.134335492987998 0.134506884899201 0.135887102379436 0.12984562718585 0.133533136226001 0.124817002927713 0.122656726443733 0.130626799279099 0.131872688520079 0.127433602518975 0.131694325468935 0.129914443217316 0.124094933316381 0.133217630307426 5 5|0 -|/ 6710005 6710823 6710405.125 6709736 6711675 - gene protein_coding_gene TRUE TRUE AT5G19850.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G38520.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57930.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.512928130252903 -5.31794973761861 0.000280012445552226 1 6.58126050608343 16.1066790900662 -0.512928130252903 0.0892014002672779 AT5G03200_at 6.37767940310272 6.91279516438038 7.4330015905704 7.91259255714267 8.15201882837499 8.0008983050348 4.91059309572183 5.89276420850536 4.22953388526093 4.24368095151461 5.75000442298686 5.95783992855495 6.37887532006656 6.44827000573186 5.60509763987446 6.34328668223927 6.24749642408925 6.33491143140777 4.39999472287599 0.272737911047652 0.259887542012323 0.272288045548926 0.280711587069557 0.274690186078563 0.265001547958771 0.257670984848121 0.269128714348453 0.2646690808042 0.254476193254614 0.26129077546116 0.257357751841656 0.261444749635492 0.257392923800457 0.266619426116971 0.254826731196968 0.255143820031656 0.255962633873253 0.254310146818707 5 0|5 /|- 760483 761080 760828.222 760318 761802 - gene protein_coding_gene TRUE TRUE AT5G03200.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G09770.1); similar to Os10g0204100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064306.1); similar to Os03g0254900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049589.1); similar to zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95025.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.811671566811352 5.31504798210647 0.000281225198904133 1 6.5776605474209 12.1611891866472 0.811671566811352 0.212219911161632 AT5G14410_at 6.29179101827841 6.48816909799268 7.16125911060834 7.47200690636178 9.0130718610198 8.50110464434978 7.34174725925313 7.42060253080025 6.09422811599399 7.21930833343588 9.03241193514906 9.18043612562777 9.06525424534136 8.98495202298788 8.56194188608514 8.69102613498977 8.55853096516906 8.51954247199556 7.52731898576963 0.206000058552049 0.201989455648569 0.205048277874909 0.196127861794007 0.196127861794007 0.207134859185251 0.20484056909109 0.202792996913033 0.243997273083708 0.210050846511073 0.198030010899077 0.198054376556823 0.199078278846067 0.196218829090007 0.211326568316299 0.196447549428576 0.200894529700897 0.201407859554452 0.201356092193189 5 5|0 -|/ 4646913 4647376 4647116.9 4646788 4647447 - gene protein_coding_gene TRUE TRUE AT5G14410.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87311.1); similar to Os01g0938400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045341.1) 0.553949144991791 5.31495765678633 0.000281263038860361 1 6.57754846423464 15.3468259461587 0.553949144991791 0.109921337485243 AT5G55970_at 5.76496136384517 5.8613623464653 6.92474652220058 6.81070882807938 8.05687046586314 7.31966465405217 4.72853911892275 5.38447411107859 3.7495024756974 4.78884924779241 5.12640326514778 5.39069422415997 7.02587759950177 6.38084366636202 4.57556360649788 7.3668861693343 7.32151071601017 5.46520585043484 4.92874909318913 0.276386563754011 0.260985759154149 0.267129828447177 0.274554296057984 0.277963139267423 0.282114064498027 0.273549387190310 0.264506826443050 0.281247352637659 0.271382282654681 0.261489438949031 0.262481508848850 0.264173622789082 0.260985759154149 0.269924595443526 0.269026760951283 0.2698884032123 0.260985759154149 0.27590617324833 5 5|0 +|/ 22685705 22686436 22686028.2 22684612 22686771 + gene protein_coding_gene TRUE TRUE AT5G55970.1|AT5G55970.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G26580.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89318.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.703531910976033 5.30737057214383 0.000284460917068065 1 6.56812853428432 11.6417442976838 0.703531910976033 0.172710016947808 AT5G27760_at 9.09451477644026 9.05503912182361 10.5125311194453 10.4015630428427 9.64059318274027 9.60634090059901 9.17597589543469 8.97956003929933 7.58751086120803 8.42813584715663 9.48316809470298 9.63177937636952 9.3878005999739 9.3538395170433 9.58063761213556 9.41070365409006 9.58738156916507 9.21429347096149 8.0710907309956 0.109973833649395 0.100862939088858 0.105559131220892 0.108379525355464 0.101591082792407 0.113640500446725 0.100862939088858 0.112348776225618 0.113241955445783 0.110078928893213 0.108864998303902 0.100862939088858 0.106242421343617 0.106908212150813 0.102898236898996 0.100879625511747 0.112180265171914 0.103611776121989 0.101484255873568 5 0|5 /|+ 9830812 9831520 9831236.375 9830347 9831794 + gene protein_coding_gene TRUE TRUE AT5G27760.1 hypoxia-responsive family protein similar to hypoxia-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G05550.1); similar to hypoxia-responsive family protein [Citrus sinensis] (GB:AAZ05072.1); contains InterPro domain Hypoxia induced protein conserved region; (InterPro:IPR007667) 0.44040627235407 5.30105604555273 0.000287151925634345 1 6.5602806783629 18.3008212431241 0.44040627235407 0.0400742624475307 AT5G08550_at 5.73023163719652 5.76473055615665 6.92412420437781 6.99449709505676 6.75003003512864 7.20859602344693 5.60906583938373 5.2890817838822 4.57783603767145 4.3955688437933 5.92875877382788 6.29347989168717 6.24386484726335 6.08050979001394 6.18288946541477 6.25241058616289 6.39844874861467 5.8956779448275 4.38338250600451 0.217725659190949 0.215392934570139 0.214024208436519 0.214024208436519 0.220730928754234 0.225399591963941 0.214024208436519 0.226829706539783 0.234352600214846 0.21923137607233 0.216683483740019 0.214024208436519 0.220393614392072 0.214024208436519 0.215956805241751 0.214024208436519 0.217287005183773 0.223146181428913 0.221663421872190 5 5 - 2766023 2767064 2766694.455 2765643 2770283 - gene protein_coding_gene TRUE TRUE AT5G08550.1 ILP1 (INCREASED LEVEL OF POLYPLOIDY1-1D); translation repressor Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G09210.1); similar to PREDICTED: similar to GC-rich sequence DNA-binding factor homolog [Danio rerio] (GB:XP_691721.1); similar to Os03g0853700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051931.1); contains InterPro domain GC-rich sequence DNA-binding factor-like; (InterPro:IPR012890) 0.527200112782769 5.2973617944587 0.000288738821858626 1 6.55568603981063 11.5896783810618 0.527200112782769 0.0977130874804956 AT5G50310_at 5.80815841928939 6.10323733596304 5.95049537760859 6.43183673721618 6.81719331188441 6.55042953017605 6.0619173765484 6.03466384662077 5.44351076581063 5.87160124502457 6.2295388210133 6.66904117946523 6.15155998903193 6.06799315466009 6.62935911683323 6.18180347186443 6.4456790578589 5.92498917189759 5.92016982982322 0.1676078604801 0.168300454934296 0.170933327418610 0.164515455409844 0.163360891761887 0.166366332860742 0.169953697142822 0.174153185925992 0.175697658196041 0.166648602219318 0.171201843288559 0.163066481280767 0.170950859172361 0.170367644095956 0.170010830269423 0.163066481280767 0.163703306620646 0.171598645365026 0.165238492366899 5 5|0 +|/ 20495427 20496279 20495929.714 20491713 20496681 + gene protein_coding_gene TRUE TRUE AT5G50310.1 kelch repeat-containing protein similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07720.1); similar to Os04g0483600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053126.1); similar to H0805A05.4 [Oryza sativa (indica cultivar-group)] (GB:CAH67474.1); similar to OSJNBa0081L15.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE03144.2); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.548293030963338 -5.2961076666857 0.000289279662240163 1 6.55412568902214 12.2360362130205 -0.548293030963338 0.108164943598392 AT5G09590_at 7.5237478824938 7.70763228954562 8.7236109795912 8.56054480683534 7.69432467825923 7.70372729783561 7.94360901815293 8.18691654838572 6.56599880589811 7.82290183342195 7.83430687791459 8.1574765417682 7.71506945120341 7.32322023796904 7.59915234563 8.2139174097709 7.95575520380886 7.61878209800929 7.07008976867169 0.123687132536529 0.130231867548976 0.125964076491865 0.131895429125241 0.125186794477046 0.131479007658117 0.134065808979093 0.135938922649128 0.144813310278710 0.129747997823552 0.126704103189815 0.126747603351797 0.136945934006745 0.130192852965838 0.126567927794010 0.125892326330730 0.131319955851879 0.135713078333618 0.13627871263342 5 5 + 2977910 2978120 2978001 2975549 2978751 + gene protein_coding_gene TRUE TRUE AT5G09590.1 mtHSC70-2 (HEAT SHOCK PROTEIN 70); ATP binding / unfolded protein binding heat shock protein 70 (Hsc70-5); nuclear similar to MTHSC70-1 (mitochondrial heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G37910.1); similar to CPHSC70-1 (chloroplast heat shock protein 70-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT4G24280.1); similar to cpHSC70-2 (HEAT SHOCK PROTEIN 70-7), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G49910.1); similar to Heat shock 70 kDa protein, mitochondrial precursor (GB:P37900); similar to Heat shock protein Hsp70 [Medicago truncatula] (GB:ABE92899.1); similar to Heat shock 70 kDa protein, mitochondrial precursor (GB:Q01899); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Chaperone DnaK; (InterPro:IPR012725); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) -0.462810524884359 -5.29139271620598 0.000291322639698546 1 6.54825694562152 15.4831175993490 -0.462810524884359 0.0598706652231027 AT5G51660_at 3.70791040810253 4.45382074042907 4.28979933269538 4.28848830502081 4.68356504086095 4.68551096363904 4.35370171936244 4.62456338847705 3.83525893530517 4.35659449453791 4.11409942322748 4.9452244620924 4.19617579502497 3.82229342876115 4.42484803749415 5.15556676787434 4.72917827060959 4.81953992208899 4.70393573357461 0.244936978744767 0.240592007489089 0.247625284803625 0.245821016463300 0.242557187274995 0.256496590257212 0.250770886817007 0.244176033562055 0.241384420092065 0.239850556044992 0.246112329042437 0.238638131715443 0.246027678182307 0.248172620488472 0.24207857110631 0.238638131715443 0.271131438573801 0.248306686749313 0.243198869947571 5 5 + 21005491 21006459 21006062.545 20997441 21006653 + gene protein_coding_gene TRUE TRUE AT5G51660.1 cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein Identical to Probable cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit) [Arabidopsis Thaliana] (GB:Q9FGR0); similar to DDB1B (DAMAGED DNA BINDING PROTEIN 1 B) [Arabidopsis thaliana] (TAIR:AT4G21100.1); similar to DDB1A (UV-damaged DNA-binding protein 1A), DNA binding [Arabidopsis thaliana] (TAIR:AT4G05420.1); similar to cleavage and polyadenylation specificity factor (GB:AAC50293.1); similar to cleavage and polyadenylation specific factor 1 [Mus musculus] (GB:NP_444423.1); similar to Probable cleavage and polyadenylation specificity factor 160 kDa subunit (CPSF 160 kDa subunit) (GB:Q7XWP1); contains InterPro domain CPSF A subunit, C-terminal; (InterPro:IPR004871) -0.612913662904726 -5.28987718331337 0.000291982572414127 1 6.54636969747471 8.79815106292467 -0.612913662904726 0.137331036246731 AT5G14440_at 6.77965786734206 6.86453767980044 7.36937283820941 7.31203426600989 7.8901538243588 7.3145855650533 6.86002961961545 7.06079491680702 7.21283689360509 7.04507369937905 7.60937830024085 7.79505677885301 7.39982320888465 7.78867196695531 7.33696724368734 7.52212345020302 7.11807028464139 7.19514394736153 7.0842464406786 0.155548676178011 0.164083761016155 0.159115024712534 0.150241178352099 0.155459329051721 0.168522099590638 0.157400505196136 0.161614232611694 0.153766449802685 0.154040939403388 0.165187424326017 0.159176017908627 0.151164504258198 0.163959479590824 0.159092305019120 0.155850820157788 0.154473911175159 0.149337453061996 0.158385113395783 5 5|0 -|/ 4656073 4657160 4656638.111 4655906 4657910 - gene protein_coding_gene TRUE TRUE AT5G14440.1|AT5G14440.2 similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to hypothetical protein DDBDRAFT_0206414 [Dictyostelium discoideum AX4] (GB:XP_641279.1); similar to OSIGBa0158F13.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66876.1); similar to Os04g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053101.1); contains InterPro domain Surfeit locus 2; (InterPro:IPR008833)|similar to surfeit locus protein 2 family protein / SURF2 family protein [Arabidopsis thaliana] (TAIR:AT5G40570.1); similar to hypothetical protein DDBDRAFT_0206414 [Dictyostelium discoideum AX4] (GB:XP_641279.1); similar to Os04g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053101.1); similar to OSJNBa0044K18.33 [Oryza sativa (japonica cultivar-group)] (GB:CAE05892.1); contains InterPro domain Surfeit locus 2; (InterPro:IPR008833) -0.545141549299797 -5.28971713166698 0.000292052359058021 1 6.54617036576543 14.4737491932284 -0.545141549299797 0.106969316706117 AT5G64460_at 9.29341224747018 9.32530585038192 9.38462669539127 9.33188340287475 9.88007951325495 9.54681601740532 10.2941690554221 10.1354356526825 9.81059264995111 10.2364890652157 10.8536145899363 10.9985180298208 10.5496848956170 10.7071414815777 10.7766147018075 10.8709515497491 10.2363225174441 10.5407920917854 10.1771030897550 0.103997776086901 0.103944969050878 0.108126375113747 0.108930885616615 0.0984875595813352 0.0992956829759966 0.104718292036718 0.0977360747146634 0.112108846972085 0.0990234722283658 0.099378954078342 0.0973911380730972 0.0994934754440233 0.102209113739183 0.0992880355751401 0.0973911380730972 0.109468113888658 0.105273117911171 0.098185275251451 5 5|0 -|/ 25790268 25791537 25791050 25790075 25792794 - gene protein_coding_gene TRUE TRUE AT5G64460.1|AT5G64460.2|AT5G64460.3|AT5G64460.4|AT5G64460.5|AT5G64460.6|AT5G64460.7 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58280.1); similar to phosphoglycerate mutase-like protein [Glycine max] (GB:AAG38144.1); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078)|similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT2G17280.2); similar to phosphoglycerate mutase-like protein [Glycine max] (GB:AAG38144.1); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078) -0.468959053713284 -5.28265975226998 0.000295147269726941 1 6.53737637048606 20.0321826796226 -0.468959053713284 0.0647649785134384 AT5G15090_at 8.97001442223625 8.98882185754818 9.4580632593779 9.49296655330985 9.2966614597968 9.03783782692155 10.0082205878378 10.0623021135642 9.39080572996222 9.67833933064989 10.2256189561569 10.2153836349536 10.1618850460158 10.3646292706949 10.223704550417 10.0597354766903 9.91888469485097 10.0714189709425 9.28128448323957 0.125586859976686 0.121809324943851 0.134729772104518 0.129550005695046 0.121508233746013 0.130024866779624 0.123677696297378 0.127971809822853 0.135147329386999 0.125369299834901 0.122778279865023 0.122564910886749 0.125541896966434 0.130927870537300 0.125323332748404 0.123952019730804 0.127170430919204 0.123874137507744 0.126408247675079 5 5 - 4889705 4890397 4889962 4889298 4891497 - gene protein_coding_gene TRUE TRUE AT5G15090.1 porin, putative / voltage-dependent anion-selective channel protein, putative Identical to Outer mitochondrial membrane protein porin 2 (Voltage-dependent anion- selective channel protein 2) (VDAC 2) (HSR2) [Arabidopsis Thaliana] (GB:Q9SMX3;GB:Q8L815;GB:Q8LET4); similar to porin, putative [Arabidopsis thaliana] (TAIR:AT3G01280.1); similar to unknown [Brassica rapa] (GB:ABB97031.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) -0.445166416286856 -5.28154004634642 0.000295641498921982 1 6.53598031321021 19.2170113882611 -0.445166416286856 0.0462695371168926 AT5G55810_at 4.22432546773513 4.01249556224024 5.52564573703035 5.69187562663757 6.17152957674376 4.82769743779231 3.7130921531703 3.42972836061349 2.80559587300108 3.32737836758147 4.56371586064979 4.35975397635912 4.54179248531434 4.52304253099782 4.62812102809835 4.85512623513401 4.56061763255772 4.2207684924232 2.51626741556968 0.340074892718517 0.333233852812129 0.333233852812129 0.333233852812129 0.335155660424701 0.359666565526592 0.333233852812129 0.333233852812129 0.35239506004124 0.369547683219298 0.333233852812129 0.3357795342936 0.333233852812129 0.355070104073786 0.334761108660543 0.333233852812129 0.356031929913614 0.357998629558238 0.352778994594233 5 5|0 -|/ 22601846 22602303 22602045 22601234 22603527 - gene protein_coding_gene TRUE TRUE AT5G55810.1 nicotinamide-nucleotide adenylyltransferase, putative / NAD(+) pyrophosphorylase, putative encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity. similar to PREDICTED: similar to Nicotinamide nucleotide adenylyltransferase 3 [Gallus gallus] (GB:XP_422634.2); similar to Os02g0814900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048497.1); contains InterPro domain Probable nicotinate-nucleotide adenylyltransferase; (InterPro:IPR005248); contains InterPro domain Cytidylyltransferase; (InterPro:IPR004820) 0.891156877580368 5.28150722619422 0.000295655998748095 1 6.5359393894066 8.40689765636666 0.891156877580368 0.242195188744759 AT5G16820_at 6.73667104470902 7.015563098668 7.7137822254825 7.79866721416637 8.53121387201126 7.39944682017807 5.67096698847974 5.75108150913293 4.28801655723308 4.85164232153466 6.71594317208061 6.42467300336308 6.96297674279086 7.18055219129006 6.4569658630081 6.4532882470708 6.72847062105783 6.67682454384662 4.70996718668312 0.22536040359877 0.221341909171589 0.225444789708388 0.223767846514435 0.221919339741662 0.238711306694921 0.226480648379192 0.221341909171589 0.238594751341725 0.230041717975522 0.221341909171589 0.223845411702087 0.225176134155958 0.234987460062611 0.221341909171589 0.221341909171589 0.224669669176864 0.230206402028088 0.227968933376620 5 5 + 5531913 5532462 5532134.091 5530276 5532892 + gene protein_coding_gene TRUE TRUE AT5G16820.1|AT5G16820.2 HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. Identical to Heat stress transcription factor A-1b (AtHsfA1b) (Heat shock factor protein 3) (HSF 3) (Heat shock transcription factor 3) (HSTF 3) (HSFA1B) [Arabidopsis Thaliana] (GB:O81821;GB:Q9LFD6); similar to ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02990.1); similar to HSF3 DNA-binding domain/VP16 activation domain fusion protein [synthetic construct] (GB:AAN86075.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Transcription regulator VP16-like; (InterPro:IPR011077); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.779726515845089 5.27715422677039 0.000297585858975221 1 6.53050986844644 12.7354260065437 0.779726515845089 0.202725338895606 AT5G26350_at 3.15082544130516 3.03530562432485 3.35540939294944 3.17631533383325 2.8694552354681 3.14752441177072 3.21964098911741 3.22515505527242 2.97729447937195 3.67058850543997 3.22186257368967 3.23584677802247 3.39693550953619 3.50599923153861 3.33233235399184 2.99615190774903 3.52569060140213 3.37152625772732 3.03732053288869 0.177253758580372 0.177180516783524 0.179621245512955 0.176581311665183 0.176843468142415 0.175544276197649 0.179910893244131 0.183754350320879 0.182986894771692 0.186509636279393 0.18026178424614 0.176676259989772 0.185455905424295 0.184728120025130 0.179048409694593 0.180778715346564 0.176445383614754 0.182314384283461 0.17608635744238 5 0|5 /|- 9253125 9253490 9253277.143 9253111 9253640 - gene protein_coding_gene TRUE TRUE AT5G26350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G33393.1); similar to hypothetical protein PFL0315c [Plasmodium falciparum 3D7] (GB:NP_701428.1) -0.462563655331457 -5.27655286513792 0.000297853518569517 1 6.52975951842863 6.42330109764218 -0.462563655331457 0.0606364334451082 AT5G16540_at 6.9271387341725 6.77293229687592 7.37376227558831 6.7812110453029 7.6668527776422 7.41430517611991 7.83395799589196 7.32698659018971 7.82961406917915 7.5934468365544 8.50218474448905 8.4706965685044 8.10591037415268 8.26800028465082 8.1673852946854 8.72961823667537 8.005966951664 8.12602000072312 7.7271819780157 0.164308321563129 0.152382740234756 0.154759305206131 0.161963526528417 0.149936110683149 0.156206407385377 0.148897409044883 0.149189227956456 0.158808330556522 0.150650060378116 0.147313055044051 0.145846818507089 0.153524398088181 0.158283393671693 0.151104931100667 0.148902459803262 0.153882117622751 0.15256710006602 0.160163083538308 5 5 + 5404356 5404987 5404707.545 5403191 5405157 + gene protein_coding_gene TRUE TRUE AT5G16540.1|AT5G16540.2|AT5G16540.3 ZFN3 (ZINC FINGER PROTEIN 3); nucleic acid binding Encodes a zinc finger protein. Identical to Zinc finger type domain-containing protein ZFN3 (ZFN3) [Arabidopsis Thaliana] (GB:Q8L7N8;GB:Q8LFU7;GB:Q9XFB9); similar to ZFN1 (ZINC FINGER PROTEIN 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G02830.1); similar to Zinc finger CCCH domain-containing protein ZFN-like (GB:Q9SWF9); contains InterPro domain U2 auxiliary factor small subunit; (InterPro:IPR009145); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|Identical to Zinc finger type domain-containing protein ZFN3 (ZFN3) [Arabidopsis Thaliana] (GB:Q8L7N8;GB:Q8LFU7;GB:Q9XFB9); similar to ZFN1 (ZINC FINGER PROTEIN 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G02830.1); similar to Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] (GB:ABD28369.1); similar to Zinc finger CCCH domain-containing protein ZFN-like (GB:Q9SWF9); contains InterPro domain U2 auxiliary factor small subunit; (InterPro:IPR009145); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) -0.628069184090208 -5.27596168277742 0.000298116897122374 1 6.52902180614279 15.2690035789027 -0.628069184090208 0.144342205466266 AT5G28770_at 7.65252525434144 7.74512805380119 8.21361004073283 8.47340666484381 9.20737002146551 8.89320939464285 8.59405383900091 8.69000715595142 8.68055474321953 8.62319252514809 9.16100256668413 8.84606093686595 9.0232493439588 8.77050774376607 8.27678805873614 9.5589739728874 9.12068112308436 8.62193898467512 9.00020891480818 0.148504541225770 0.142686030076450 0.154270497382294 0.144784772886865 0.143099146122613 0.145144522709382 0.137000463029613 0.146907950356573 0.159978251437941 0.142165907307548 0.145096992924948 0.145704328181843 0.149787894704269 0.158532158851708 0.154993254097137 0.139949583341658 0.144439188682122 0.147541350917483 0.137000463029613 5 0|5 /|- 10796778 10797402 10796962.556 10796463 10798226 - gene protein_coding_gene TRUE TRUE AT5G28770.1|AT5G28770.2|AT5G28770.3 BZO2H3 (basic leucine zipper O2 homolog 3); DNA binding / transcription factor bZIP protein BZO2H3 mRNA, partial cds similar to BZO2H4 (basic leucine zipper O2 homolog 4), transcription factor [Arabidopsis thaliana] (TAIR:AT3G54620.1); similar to Light-inducible protein CPRF-2 (GB:Q99090); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)|similar to BZO2H4 (basic leucine zipper O2 homolog 4), transcription factor [Arabidopsis thaliana] (TAIR:AT3G54620.1); similar to Light-inducible protein CPRF-2 (GB:Q99090); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.482742805939921 -5.27410913880064 0.000298943832578264 1 6.52670968471278 17.2788566709596 -0.482742805939921 0.0742268356601997 AT5G20870_at 3.53291610232603 3.24247893243499 3.55383053657864 3.50650377008991 2.97128069351310 3.45731868181476 3.01889644761292 3.17553088121771 3.76080479257129 3.62234983172579 3.78355688203311 3.82340201529871 3.42787480337873 3.51519717782248 3.72087861973650 3.53337036458821 3.87826364809696 3.57665626581867 3.6234263245307 0.181599776672257 0.177369587793614 0.178214004285149 0.180789858043831 0.184094916179393 0.187253148771953 0.191470314592341 0.178671758045345 0.182866286112569 0.178989904012654 0.179467186115697 0.175837880918024 0.180916617318057 0.177602091312181 0.177158335821451 0.175837880918024 0.18259645366681 0.179448433712105 0.177382772344030 5 5 - 7080122 7080607 7080351 7079977 7081771 - gene protein_coding_gene TRUE TRUE AT5G20870.1 glycosyl hydrolase family 17 protein similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G31140.1); similar to putative 1,3-beta-glucanase [Oryza sativa (japonica cultivar-group)] (GB:AAP12947.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.532123000087854 -5.26167263569289 0.000304558777341229 1 6.51117194582639 6.9704746498848 -0.532123000087854 0.101993792064347 AT5G46290_at 8.61515270547584 8.73216647962425 8.6099505677913 8.60072536967296 8.73807308880161 8.5130853910238 9.34410613948664 9.42461101062042 8.36509131527739 8.71995679170225 9.8080771382515 10.0932728841974 9.4571650300286 9.49175382951204 10.2747498762592 9.56051466316212 8.86460624887427 9.5535784901694 8.56279727582496 0.122195687028545 0.118332218126205 0.131454501945366 0.124609940480772 0.125626426933541 0.136206014843150 0.124815660498933 0.120967516857679 0.136734539859602 0.121396785024661 0.123259519632917 0.122790888087282 0.120459889341541 0.124044044008155 0.122363426721093 0.122197495530511 0.134621554812972 0.128184951467332 0.119371796657294 5 5|0 -|/ 18791687 18792497 18792087.7 18791313 18793962 - gene protein_coding_gene TRUE TRUE AT5G46290.1|AT5G46290.2 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA, Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to 3-ketoacyl-acyl carrier protein synthase I (GB:AAC49118.1); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to beta-ketoacyl-ACP synthase (GB:AAA33873.1); contains InterPro domain Beta-ketoacyl synthase; (InterPro:IPR000794)|Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to 3-ketoacyl-acyl carrier protein synthase I (GB:AAC49118.1); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to beta-ketoacyl-ACP synthetase I [Glycine max] (GB:AAF61730.1); contains InterPro domain Beta-ketoacyl synthase; (InterPro:IPR000794) -0.442396000259250 -5.25121849267312 0.00030936549210701 1 6.49808935413668 17.9158571262246 -0.442396000259250 0.0460721524134929 AT5G64120_at 3.89987220493675 4.25875546061826 3.87833919610962 4.50081205721798 5.52923182984379 5.47740813336198 2.36772976231380 2.19338863949226 5.14299070693465 3.591939136734 4.35553720577363 5.14422224187971 3.81814270176749 4.87026523195261 5.74329631282137 5.02795064734715 4.25607426963843 6.48533525413936 2.88719581450477 0.244565777502978 0.249832995165231 0.255306895032258 0.250305742321634 0.244739779378171 0.256204098373683 0.257999262958598 0.252704620052917 0.250492135434028 0.254375364237670 0.246635854623256 0.244565777502978 0.246575718768685 0.245522718255624 0.244565777502978 0.244565777502978 0.248601597905029 0.250657332163883 0.257562992349344 5 5|0 -|/ 25676874 25677761 25677214.8 25676532 25678228 - gene protein_coding_gene TRUE TRUE AT5G64120.1 peroxidase, putative encodes a cell wall bound peroxidase that is induced by hypo-osmolarity Identical to Peroxidase 71 precursor (EC 1.11.1.7) (Atperox P71) (ATP15a) (ATPO2) (PER71) [Arabidopsis Thaliana] (GB:Q43387;GB:Q9SBA0); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G39580.1); similar to peroxidase [Populus alba] (GB:BAE16616.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.587173483543956 5.24879699152206 0.000310490343056360 1 6.49505621627198 8.4315145950982 0.587173483543956 0.128264934066539 AT5G47830_at 6.10189941576126 6.09925107909845 6.56639100790254 6.77467349091812 7.24441950030155 6.99823194288129 6.05363877412071 6.24792704375454 6.82770167193598 6.33992032069543 6.94927392514827 6.80461790990654 6.94165324302734 7.06977176142819 7.16843484726018 6.82225833550826 6.58913788881233 7.03834614192987 6.43910567788236 0.186469270463073 0.182806940681571 0.194266142296509 0.174083324270732 0.185474298930471 0.196833243278566 0.181864006130958 0.184990219470358 0.178027004007016 0.170271295901694 0.173799974148649 0.174235117494346 0.175373457063347 0.17490192709088 0.169124262907655 0.174245289896072 0.182628180449518 0.174728561012150 0.170624441806628 5 5 - 19390280 19391505 19390878.111 19390124 19391557 - gene protein_coding_gene TRUE TRUE AT5G47830.1|AT5G47830.2 similar to hypothetical protein MtrDRAFT_AC150207g26v1 [Medicago truncatula] (GB:ABD32636.1) -0.466503526912495 -5.24865044674407 0.000310558556391118 1 6.49487262248644 13.2400603552417 -0.466503526912495 0.0651533805920297 AT5G54130_at 6.19649127940698 6.66024764086679 8.10699307185916 8.22341473490915 7.91145273910102 7.3753182730619 9.76693218240258 9.3838322591805 7.03600435880291 7.83228261699726 7.64558033230336 7.98196609605854 8.42811487942494 8.28331144339103 6.63134624714647 9.56900679518896 9.05229866564385 8.29151621579613 7.66306706071312 0.141295592576401 0.138780340316352 0.141992540464352 0.14015284045043 0.136250507755838 0.140681880966023 0.136415350819985 0.137635498515116 0.149628690704233 0.142069424912055 0.139509582740804 0.134050155055166 0.135042670601424 0.140875939902642 0.14304657674461 0.134079664074530 0.140724596158843 0.138715345577221 0.142180833269726 5 5|0 +|/ 21980151 21982477 21981259.263 21979826 21982830 + gene protein_coding_gene TRUE TRUE AT5G54130.2 calcium ion binding similar to endonuclease/exonuclease/phosphatase family protein / calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G02270.1); similar to Calcium-binding EF-hand; Endonuclease/exonuclease/phosphatase [Medicago truncatula] (GB:ABE85174.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) -0.616400704646301 -5.24729229116639 0.000311191506435051 1 6.49317091812683 15.8260072375353 -0.616400704646301 0.140891334434559 AT5G44480_at 3.11372648579107 3.08561116878202 4.96261399804175 5.22136074651528 2.67552652689123 2.73232358191975 1.57528601897025 1.71978701136968 1.91738313395393 2.1820782817645 1.96390006486369 1.83336764073884 1.99993495104084 2.21779832085450 1.87571148957169 1.88501024794136 2.10211083418349 1.88406681273702 1.92270474567007 0.248666269400284 0.2636438218615 0.277386138695192 0.286143255655322 0.250024804341826 0.261213572324708 0.248883241336678 0.243981047885575 0.26643635400496 0.249384199741504 0.245992304604078 0.249602641969295 0.244816722180641 0.252186331192006 0.251133406467444 0.241941172783817 0.258062761643373 0.256089588470794 0.245252158125116 5 5|0 +|/ 17939953 17940782 17940360.5 17938742 17940870 + gene protein_coding_gene TRUE TRUE AT5G44480.1 DUR (DEFECTIVE UGE IN ROOT); catalytic mutant has Altered lateral root; UDP Glucose Epimerase Identical to Putative UDP-arabinose 4-epimerase 4 (EC 5.1.3.5) (UDP-D-xylose 4- epimerase 4) [Arabidopsis Thaliana] (GB:Q9FI17); similar to MUR4 (MURUS 4), catalytic [Arabidopsis thaliana] (TAIR:AT1G30620.2); similar to NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] (TAIR:AT4G20460.1); similar to Putative UDP-arabinose 4-epimerase 3 (UDP-D-xylose 4-epimerase 3) (GB:Q9SUN3); similar to Putative UDP-arabinose 4-epimerase 2 (UDP-D-xylose 4-epimerase 2) (GB:O64749); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886) 0.448733160227268 5.23953297135555 0.000314834038225294 1 6.48344248982553 5.12459257513726 0.448733160227268 0.0524463545698894 AT5G37500_at 2.96277177174579 2.92241090707352 2.94460294416131 2.66310786396019 3.8664751160132 3.63297937780021 2.00285621815008 2.17302175036803 2.62163178831546 2.05538398619905 3.22515171649488 3.94123054948784 3.1817860356342 2.98805501237255 3.87863989658935 2.87363039839974 3.14405600876772 2.90126166106711 2.28024300333155 0.241390887122183 0.245163178199893 0.250387085174934 0.245130120142401 0.248238610650690 0.253249708664561 0.243680177398699 0.255179117083213 0.254940724355111 0.249765637180032 0.247515948850136 0.254816309699192 0.245231015684075 0.245275259536341 0.248570544361794 0.241390887122183 0.24676641168787 0.245423712413855 0.248817611194367 5 5 - 14907074 14907699 14907350 14906922 14912134 - gene protein_coding_gene TRUE TRUE AT5G37500.1 GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel encodes a guard cell outward potassium channel. Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold. Identical to Potassium channel GORK (Guard cell outward rectifying K(+) channel) (AtGORK) (GORK) [Arabidopsis Thaliana] (GB:Q94A76;GB:Q9FNY5); similar to SKOR (stelar K+ outward rectifier), cyclic nucleotide binding / outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT3G02850.1); similar to outwardly rectifying potassium channel [Samanea saman] (GB:CAC10514.1); similar to shaker-like potassium channel [Vitis vinifera] (GB:CAD35400.1); similar to potassium channel TORK1 [Nicotiana tabacum] (GB:BAD81036.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain Cation channel, non-ligand gated; (InterPro:IPR005820) 0.472975574566129 5.23732658497936 0.000315878062598905 1 6.4806742017262 5.68893457822589 0.472975574566129 0.0701554829852568 AT5G04160_at 3.12271886209293 3.63266679232311 2.02613955327113 2.13647064948696 3.30940006474562 3.10998001831848 4.60212935515283 4.8499798848794 4.04058373863503 4.45880888575236 6.83757931112627 7.54140586430447 6.05860806977019 5.94587936789557 7.58908123245036 5.5744148765396 4.31885566562661 5.43511759254728 4.17962291757504 0.258260184734067 0.263733547793454 0.273786003939012 0.270267013757778 0.263426268760739 0.285087133728925 0.259276482902278 0.271649848508006 0.269278248257672 0.259770814349098 0.261535080201672 0.262187992139099 0.259836574766115 0.276239651509256 0.269093202199686 0.2713675903327 0.279378753192820 0.261856291787614 0.260740884027227 5 5|0 -|/ 1143081 1144406 1143589.6 1142783 1144913 - gene protein_coding_gene TRUE TRUE AT5G04160.1 phosphate translocator-related similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT3G10290.1); similar to plastidic phosphate translocator-like protein2 [Mesembryanthemum crystallinum] (GB:BAD91177.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) -0.537064750317737 -5.23556609075515 0.00031671373891824 1 6.47846473263293 8.54316377829382 -0.537064750317737 0.105750147100486 AT5G56850_at 8.74740714822577 8.45264956509848 9.30531843481354 8.88723175272948 9.64614713529098 8.93458393623962 10.0723052416629 9.61941370577724 10.0351197335348 10.4447090673917 10.5503841736321 10.5389472233171 10.1769589421735 10.1631236065657 10.3473710428522 10.6461457773507 10.2381528608227 10.4424393445137 10.6094272915074 0.107008860141918 0.105783613706085 0.101272106848127 0.112554060683226 0.100620616197918 0.100972187544282 0.0995224558438187 0.0999370559121592 0.104455332530760 0.0971610296303266 0.0999807265635625 0.0983165151215808 0.0971610296303266 0.107119361506437 0.0991285231878391 0.099040219025407 0.0987263601320479 0.100887287092360 0.0982604016857893 5 5|0 -|/ 23002672 23003268 23002914.25 23002419 23005239 - gene protein_coding_gene TRUE TRUE AT5G56850.1|AT5G56850.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to Os05g0232200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054981.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS98490.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to GA14882-PA [Drosophila pseudoobscura] (GB:EAL32833.1) -0.688365074905184 -5.23170934016094 0.000318552699256432 1 6.4736224531379 19.5836449827538 -0.688365074905184 0.170712214544686 AT5G51220_at 6.42666193096373 6.49878846194484 7.19766465336284 7.19730313041847 7.07682594189116 6.81128934851529 6.72167546220378 6.59659425692116 5.60011480079157 5.72781150195672 6.11092679310521 6.29105844572351 6.00446907305588 6.46585189855524 6.4484467478687 6.73464336189277 6.40604392636467 6.32443178468432 5.65644049312602 0.222027982992688 0.200371273586483 0.211768924522409 0.200371273586483 0.206993435242705 0.216931415844851 0.205673574078898 0.221599377730939 0.242718050327513 0.211002259586015 0.209048675433174 0.200751010779131 0.205398676407111 0.212869011259907 0.200371273586483 0.210181720819353 0.224474183747562 0.210399813900877 0.202548607788572 5 0|5 /|- 20838566 20839194 20838779.429 20838441 20840492 - gene protein_coding_gene TRUE TRUE AT5G51220.1 ubiquinol-cytochrome C chaperone family protein similar to Ubiquinol cytochrome c reductase assembly protein CBP3 (ISS) [Ostreococcus tauri] (GB:CAL50389.1); similar to Os07g0490300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059673.1); contains InterPro domain Ubiquinol-cytochrome C chaperone; (InterPro:IPR007129) -0.447731785764008 -5.229816471006 0.000319459399963033 1 6.47124491269467 12.8206951995432 -0.447731785764008 0.0523064291411801 AT5G62770_at 3.98274957229032 3.97972945834809 5.5924250613773 6.0054232000532 3.52556412658572 3.12419845602595 2.12437184110857 2.36175169434726 2.3940344025096 2.15505709230711 2.78843126478485 2.77583274663818 2.98522748331471 2.90213818169630 3.36794931133144 2.99915821521 2.69756670389070 2.50106182495324 2.20980670131200 0.247671039156669 0.242767904832671 0.256816487012017 0.260928196790107 0.246797404646208 0.248535290189626 0.250033602586116 0.243012390708194 0.259027191760171 0.249125245956458 0.242767904832671 0.242767904832671 0.242767904832671 0.247844347399106 0.242767904832671 0.242767904832671 0.242767904832671 0.248686437887077 0.250963462624126 5 5 + 25228004 25228567 25228213 25227721 25228833 + gene protein_coding_gene TRUE TRUE AT5G62770.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23710.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70420.1); similar to Protein of unknown function DUF1645 [Medicago truncatula] (GB:ABE93113.1); contains InterPro domain Protein of unknown function DUF1645; (InterPro:IPR012442) 0.540591428552116 5.22903011754111 0.000319836876477505 1 6.47025702285551 6.40209506719388 0.540591428552116 0.107797940664917 AT5G15740_at 2.61041970505679 2.51802610944859 2.18713989796949 2.2237951502351 2.17670729899151 1.94979129867983 4.49217971008345 4.28480440857311 3.4862029981681 3.81745194804289 6.71667233280188 7.1980866349976 4.41069274965336 5.72149786451678 6.33081978141378 5.21769066805428 3.35230554654725 5.76003338642345 4.0863740420221 0.231588581213789 0.227915796170368 0.233696227968320 0.231407312516721 0.237555499170702 0.240791132338319 0.242783606617978 0.242146256235994 0.235624773566114 0.228503127005701 0.23558115980365 0.238479826807746 0.234514060033173 0.234432250545585 0.234711968771846 0.232185650460051 0.241991337197398 0.235783711111461 0.234267418644650 5 5|0 -|/ 5134820 5135478 5135161.3 5134530 5137629 - gene protein_coding_gene TRUE TRUE AT5G15740.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02250.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96934.1); similar to Os06g0284200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057398.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96844.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) -0.451982153546013 -5.22716828616085 0.000320732511099555 1 6.46791757444682 7.49793354736077 -0.451982153546013 0.055909130733804 AT5G11110_at 3.33793387469155 3.62859905749694 4.63828799362041 4.55670311233647 4.16363086703949 3.58449048321508 3.20254121131264 3.15462849467268 2.46352983062156 2.98626574125129 3.58063904199563 3.52024459084176 4.33504279033745 4.48835481561322 4.0271228320432 4.39304603213666 4.75067081776154 4.00262651593794 2.59306938948828 0.230784382477043 0.221541448362424 0.230263454869392 0.228634365121636 0.219695401513511 0.241392301301571 0.232825440327387 0.232119910008079 0.236053459035819 0.23010223726368 0.219695401513511 0.227560686726097 0.219695401513511 0.229733264727262 0.219695401513511 0.222194242715177 0.230773607404832 0.22529837516174 0.220166216168985 5 5|0 +|/ 3540098 3540871 3540595.889 3536227 3541134 + gene protein_coding_gene TRUE TRUE AT5G11110.1 ATSPS2F (sucrose phosphate synthase 2F); sucrose-phosphate synthase Encodes a protein with putative sucrose-phosphate synthase activity. similar to ATSPS3F (sucrose phosphate synthase 3F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G04920.1); similar to ATSPS1F (sucrose phosphate synthase 1F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G20280.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to Sucrose-phosphate synthase 1 (UDP-glucose-fructose-phosphate glucosyltransferase 1) (GB:O22060); similar to sucrose phosphate synthase [Cucumis melo] (GB:ABC96184.1); similar to sucrose phosphate synthase [Actinidia chinensis] (GB:AAL86360.1); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria; (InterPro:IPR006380); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296); contains InterPro domain Sucrose phosphate synthase, plant; (InterPro:IPR012819) 0.551912024595086 5.22672303320207 0.00032094709505577 1 6.46735800792295 7.19243859515006 0.551912024595086 0.113326568467611 AT5G06060_at 9.57447540951673 9.56151348554078 9.9247738841233 9.57641541469063 10.2159684991285 9.73892880642372 10.4003024719738 10.1715696532245 9.81510660864581 10.0605482386551 10.1813530038929 10.3633159694669 10.2796162260005 10.2684073256071 10.0591269564158 10.4731760642331 10.0683665839771 10.1838666723710 9.9006425113711 0.106103417725665 0.100980093409261 0.107881531290652 0.106915870408416 0.104399183040295 0.108032941786942 0.102258337187500 0.103138231038632 0.107271739734945 0.0994886165526883 0.102366381052756 0.101532347356384 0.104801163988715 0.107630250999452 0.100684608401662 0.0997012759111566 0.108831746775455 0.101203150036253 0.100167660127113 5 5 - 1824087 1825222 1824486.182 1823843 1825895 - gene protein_coding_gene TRUE TRUE AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29290.1); similar to Tropinone reductase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95188.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -0.543844588555789 -5.22359088619567 0.000322460913476576 1 6.46342070949171 19.9755364796459 -0.543844588555789 0.109641732653854 AT5G66420_at 5.97798125204101 5.99759030251008 5.10078916809139 4.9174796177278 5.96940614972606 5.38438363047516 6.13171118568888 5.9551057553393 5.90811560159239 6.51794575333928 8.2099359057905 8.4583777998241 7.57557589463924 8.09223208322646 8.5637298940435 7.74651797765254 7.2350083919402 7.84084645050658 6.4487716598281 0.213002995349883 0.215389201270772 0.217884193804394 0.217919914651788 0.214848650023995 0.229051754374928 0.213002995349883 0.215545232700207 0.216343529793174 0.213002995349883 0.215321714513286 0.236770630066927 0.222578559412549 0.233562462539236 0.22523197074894 0.213002995349883 0.226827855048432 0.221510444271514 0.215629232923623 5 5|0 -|/ 26539194 26539838 26539596.2 26538900 26542307 - gene protein_coding_gene TRUE TRUE AT5G66420.1|AT5G66420.2 similar to hypothetical protein [Thellun (GB:ABB45848.1); similar to Os06g0472400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057623.1); contains InterPro domain Protein of unknown function UPF0261; (InterPro:IPR010647) -0.545443597513061 -5.22255466160868 0.000322963407691598 1 6.46211772357388 12.8077504100114 -0.545443597513061 0.110460906074723 AT5G44650_at 9.8603634834351 9.74486794729469 10.1618498576355 9.90251473517336 10.1867724999497 9.770290867859 10.4552607334846 10.4069596039485 10.4403320226473 10.5517425328500 10.849735561466 11.0582217271748 10.6297311645831 10.9415238423686 10.9668007833238 10.8738871189468 10.5894868201865 10.4852224673906 10.2575670351309 0.100876208245298 0.0905780507244241 0.0888822780259025 0.0920752680882312 0.0877186275671173 0.0899000793845053 0.0926237999767158 0.0906375698738674 0.0929098846451816 0.0921714427935433 0.0905215661819426 0.0885553345720316 0.0895126894213702 0.0907213745864869 0.0880908939149734 0.0877186275671173 0.088776998851892 0.0898649332834267 0.089552920531522 5 5|0 +|/ 18031771 18032495 18032176.3 18030376 18032630 + gene protein_coding_gene TRUE TRUE AT5G44650.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68269.1); similar to Os01g0798500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044524.1) -0.500401213850008 -5.21770601413896 0.000325325738355850 1 6.45601829170656 20.6690466573756 -0.500401213850008 0.0876251269960548 AT5G03970_at 5.47600046024329 5.52504932627117 7.22943514735888 6.88101535946197 6.68217228050356 6.89148628260804 4.57525840353986 5.08608580260061 4.75009283220237 3.78001982352701 5.52227749404336 5.50860471111675 5.11387694052598 5.38384667846524 5.445901740672 5.74116244913336 5.99926947015235 5.61760213115793 4.17420598865084 0.200949715169237 0.199098651472164 0.203780621323459 0.203764109192159 0.209764690245746 0.204764099346255 0.209521113552738 0.216346584778874 0.226665219957611 0.215453333768035 0.204198927878504 0.197833314312124 0.208000773672983 0.217073012670186 0.202820413451155 0.198362192731329 0.200100682556653 0.20770393384695 0.202994402271472 5 5 - 1071723 1072284 1071947 1071567 1073422 - gene protein_coding_gene TRUE TRUE AT5G03970.1|AT5G03970.2 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G07610.1); similar to F-box protein [Capsella rubella] (GB:AAR15468.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043)|similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G07610.1); similar to F-box protein [Capsella rubella] (GB:AAR15468.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 0.550781660452085 5.21676631277337 0.000325785695801957 1 6.45483568999919 10.9314831745076 0.550781660452085 0.113289244420169 AT5G55400_at 3.6767005912235 4.38769660912476 3.77680522343683 4.60961806350110 3.77093315540674 3.59920494830276 5.18894701447425 5.19503386312487 5.04478607066715 4.78304137165758 6.57637843973032 7.39353148556927 5.32151782632937 5.68247832781594 6.51248647081506 5.35163856131207 3.88727239194314 5.95798374364286 4.71009859753439 0.257100539960896 0.254259856821134 0.257861162468436 0.263704616920220 0.260189416850581 0.261556047215971 0.254259856821134 0.258942356800146 0.285894362709788 0.255031500999654 0.258394540217219 0.254259856821134 0.263468667643287 0.254298912053276 0.262116210114018 0.254259856821134 0.285552687093575 0.265471997410698 0.257662127288627 5 5 - 22472782 22473447 22473001.545 22472761 22476176 - gene protein_coding_gene TRUE TRUE AT5G55400.1 fimbrin-like protein, putative Identical to Putative fimbrin-like protein 3 (FIM3) [Arabidopsis Thaliana] (GB:Q9FJ70); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G35700.1); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT2G04750.1); similar to Os02g0588300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047274.1); similar to Os02g0719100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047943.1); similar to fimbrin/plastin-like [Triticum aestivum] (GB:AAC49813.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) -0.741322348121734 -5.21529570072189 0.00032650690724886 1 6.45298462512403 9.61631055983158 -0.741322348121734 0.191819225031611 AT5G66470_at 6.84002559796821 6.57118080384217 6.7897363419533 6.75966417446684 7.1700014869492 6.8313206854053 6.74572501772272 6.6372243844763 6.08403420797238 7.20505029371932 7.52360805435158 8.03024166520453 7.6664871318905 7.42085248951564 8.24365410195267 7.66385418070723 7.63223430365848 7.26182275834072 7.02096591730245 0.132958285052781 0.129660242386637 0.135447784443269 0.139794725362411 0.133076559459738 0.134615506108132 0.136345359575271 0.132953520048013 0.145386026288904 0.129660242386637 0.134623494164094 0.138190995237124 0.130908556766856 0.129660242386637 0.138600450779621 0.131837166954273 0.136659918135098 0.136880045164874 0.133614574401310 5 5|0 -|/ 26559224 26560515 26559809 26558937 26561585 - gene protein_coding_gene TRUE TRUE AT5G66470.1 GTP binding / RNA binding / nucleic acid binding similar to GTP-binding protein (ERG) [Arabidopsis thaliana] (TAIR:AT1G30960.1); similar to hypothetical protein [Thellun (GB:ABB45853.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain KH, type 2; (InterPro:IPR004044); contains InterPro domain GTP-binding protein Era; (InterPro:IPR005662) -0.482312218484779 -5.21443021682598 0.000326932147499229 1 6.45189505529711 14.0182903826150 -0.482312218484779 0.0773263799578483 AT5G02550_at 3.36991497185763 3.5979282945926 2.71748164667445 2.98877024070263 1.91815874278041 2.50015689188859 2.46538108567841 3.04643401558999 3.41010758272396 3.22968671414174 3.69293684074383 4.66494671962552 3.99534619152752 3.57326636583089 4.30895621464753 4.01521838938892 3.27433530038722 3.6167868764849 4.02654187669486 0.211913638678943 0.212257638307235 0.212233525071811 0.22542090825273 0.219213767530048 0.216265798300824 0.215263245445081 0.21187529395773 0.215221677644371 0.210275283635271 0.209734907834541 0.216481425184608 0.213983307013511 0.210716600878880 0.207617549420230 0.206379659160681 0.220061769654739 0.206379659160681 0.213116986572180 5 5 - 573253 573451 573361.182 573052 573556 - gene protein_coding_gene TRUE TRUE AT5G02550.1 unknown protein -0.645870485577986 -5.20895297810253 0.000329636981915829 1 6.44499655508006 6.54961298797878 -0.645870485577986 0.154971579967304 AT5G61030_at 5.23026456980973 4.93916445726784 5.99676167679623 6.01486951914259 5.10837893160119 5.19521541484938 4.91633924614173 5.10964077093932 4.51591936909582 4.90944049845598 4.90906221046671 5.13384576965102 5.36092188301685 5.04397751985745 5.59902063889359 5.05735087374088 5.73275917364664 5.00792315139501 4.92037088148521 0.164834457490633 0.164834457490633 0.164834457490633 0.172027233263584 0.164834457490633 0.166394334318673 0.168371721097875 0.167281373550834 0.179044638325099 0.167422773994537 0.175449941475295 0.176899256160638 0.171185183157766 0.164834457490633 0.168037984051909 0.166902148539352 0.178128403893842 0.169572731644021 0.164834457490633 5 5 + 24578883 24579251 24579079.818 24577677 24579532 + gene protein_coding_gene TRUE TRUE AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); RNA binding encodes a glycine-rich RNA binding protein. Gene expression is induced by cold. similar to GR-RBP5 (glycine-rich RNA-binding protein 5), RNA binding [Arabidopsis thaliana] (TAIR:AT1G74230.1); similar to RNA-binding protein precursor [Solanum tuberosum] (GB:AAL07519.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.458316609112446 -5.20059397915163 0.000333810874448726 1 6.4344581093846 10.3200882744498 -0.458316609112446 0.0623893201991399 AT5G27850_at 10.7201476018169 10.7806383903476 10.8156600379611 10.8994874169003 10.8499903711141 10.7084627660991 10.7613681263558 10.6980868744878 10.2543182285307 10.1609010058198 10.4457291872258 10.8815114218684 10.3568139833062 10.1911730333463 11.0015483678674 10.2539613503837 10.4141999466573 10.5496283907032 10.2081032645881 0.0658536438583594 0.0667595304504034 0.0665559522323395 0.0680207512665042 0.068733749579032 0.0686922609790328 0.0661095914022427 0.0679879299616019 0.0720417868859706 0.0658709895975536 0.0665430234041508 0.0658536438583594 0.0686391441314725 0.0703654763466124 0.0673421746620215 0.0669638324048614 0.0683073221198201 0.0670525406011071 0.0659920086493957 5 5|0 +|/ 9873388 9874206 9873812.4 9873156 9874602 + gene protein_coding_gene TRUE TRUE AT5G27850.1 60S ribosomal protein L18 (RPL18C) Identical to 60S ribosomal protein L18-3 (RPL18C) [Arabidopsis Thaliana] (GB:Q940B0); similar to RPL18 (RIBOSOMAL PROTEIN L18), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G05590.1); similar to cytoplasmic ribosomal protein L18 (GB:AAA69928.1); contains InterPro domain Ribosomal protein L18e; (InterPro:IPR000039) -0.424653520241575 -5.1925842742876 0.000337863089956038 1 6.42434822754478 21.1390276363767 -0.424653520241575 0.0322461466094844 AT5G42480_at 7.73699359301711 7.8807794887865 7.97943350443216 8.1164377824153 8.45518480350687 8.13452038119454 8.20374031432809 8.08799403399904 8.00880244186837 8.00442598637072 8.72632673909863 8.72322338869582 8.44662233952107 8.65558412541912 8.57558308335856 8.7965747272471 8.70901486156047 8.28794934121743 7.88095196533603 0.144903516576847 0.137641879238419 0.150181771154751 0.144733819898427 0.139231184828481 0.143899898350400 0.136018608780665 0.139354942857256 0.157025508502678 0.140885108777759 0.135208173748576 0.135375063150196 0.135208173748576 0.144645873345196 0.144320329194892 0.136369305650249 0.145325928994249 0.154763798910952 0.138510626171266 5 5|0 +|/ 17004620 17005531 17005121 17002410 17005668 + gene protein_coding_gene TRUE TRUE AT5G42480.1 ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast. similar to cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G19180.1); similar to Os02g0122400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045726.1); similar to TPA: TPA_exp: plastid division protein precursor [Oryza sativa (indica cultivar-group)] (GB:DAA01472.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.465628919114206 -5.18731425161113 0.00034055775797797 1 6.41769008429654 16.3643037995215 -0.465628919114206 0.0682782190456239 AT5G10390_at 4.6650026230491 4.82614264570251 6.53000177076366 6.62437824823559 4.4983253097331 4.63857299565928 5.73015723078577 5.78529569965537 5.22333428740288 5.43825280451188 5.69633911921336 6.80529881121256 5.4865121774619 6.03151752310006 6.92086795445643 5.78658041858003 5.35014984747119 5.16766953316508 4.72911502324169 0.234599393634953 0.221809576863217 0.219881548641972 0.219293285561538 0.219569814693201 0.226673034099360 0.217569048805696 0.215610866662038 0.232901206612279 0.21671246302376 0.227421434523327 0.216618702896749 0.222470417483595 0.225749975211277 0.229962120274477 0.215610866662038 0.229261642612941 0.228013622631047 0.225450613675732 5 5 - 3269110 3269440 3269266.545 3268848 3269551 - gene protein_coding_gene TRUE TRUE AT5G10390.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.431988768520435 -5.18293915037878 0.000342812186915072 1 6.41215878614754 10.9301600461821 -0.431988768520435 0.0415268782629272 AT5G39250_at 4.74528736480015 5.40587150543187 5.88026999643195 6.15142929765746 6.41024106492649 6.29737163757956 4.09958785519029 4.12139951874444 3.86040478466672 3.55319818656264 4.93244200191765 5.24962745561602 5.02789574177678 5.37018022869373 4.54877285813286 5.18368900258176 5.2553070104095 5.14652557668073 3.71743417526963 0.258239764430456 0.253164255037204 0.262046616379918 0.259637675154179 0.269355139008253 0.263354823909958 0.253551424010395 0.25913748427776 0.258330488154566 0.261664318385386 0.256224307137238 0.253164255037204 0.254981462163156 0.253164255037204 0.253491099166736 0.256607177479619 0.279416755014096 0.262697995982397 0.261440411139792 5 5 + 15742321 15742742 15742576.818 15741715 15742984 + gene protein_coding_gene TRUE TRUE AT5G39250.1 F-box family protein similar to F-box family protein-like [Solanum tuberosum] (GB:ABB29946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.572672540645458 5.18102729206598 0.000343802315749501 1 6.40974060408501 9.78875763008317 0.572672540645458 0.125164593121901 AT5G46680_at 2.66393730604540 2.77220482704865 3.85711407214908 3.44382201749003 3.84505456006487 3.60136531386793 2.66265064961583 2.47246012070594 2.29251065297245 2.18031578332672 3.49179903298354 2.9806394137932 3.17770349130763 3.38515721823116 2.87117575794647 3.40093968946978 3.07376712701622 3.26637517402373 2.69315837934889 0.204456690662178 0.208487291852048 0.200376660113571 0.205715337047353 0.207865118654311 0.207770596713835 0.202241077094674 0.204362148662316 0.20336011762994 0.206656324797727 0.206966020707316 0.207068208824262 0.203087537167262 0.206128292982955 0.199708947185594 0.204962635174497 0.214015556870254 0.206994966158667 0.213178566994769 5 5 + 18959170 18959667 18959498.182 18958196 18959829 + gene protein_coding_gene TRUE TRUE AT5G46680.1 pentatricopeptide (PPR) repeat-containing protein similar to zinc finger (C3HC4-type RING finger) family protein / pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G17910.1); similar to Hypothetical PPR-repeat protein At4g17915 (GB:P0C043); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.503279340479751 5.17898822250926 0.000344861675759414 1 6.40716079595599 5.96212921752971 0.503279340479751 0.0912589071322954 AT5G61970_at 7.8660188945876 8.0413119083523 8.53866551011428 8.23968004687373 8.62930433281947 8.25561326433255 8.03587361396255 8.07552354989774 7.77786952457268 7.0280001115165 8.0582154832224 8.02959506953057 7.8429784350977 7.48891353783051 7.74007855044716 7.69832853215282 7.32987490442722 7.51208338949544 6.91490645508764 0.224075169012394 0.217421551599045 0.229818564161163 0.229075182064955 0.217421551599045 0.235747305232999 0.220704800270747 0.225158618219072 0.233765436680945 0.234168961130584 0.22467665533849 0.220604013250120 0.218097173284432 0.230815523588900 0.222960131992943 0.220864517456353 0.236018860985607 0.221591801733905 0.219247927057878 5 5|0 +|/ 24908970 24910277 24909789.6 24905843 24910554 + gene protein_coding_gene TRUE TRUE AT5G61970.1 signal recognition particle-related / SRP-related similar to PREDICTED: similar to signal recognition particle 68kDa isoform 1 [Bos taurus] (GB:XP_582620.2); similar to Os08g0323000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061540.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.498165544991154 -5.17863158117533 0.000345047318163243 1 6.40670950041166 15.6866324825347 -0.498165544991154 0.0884675143398055 AT5G55120_at 5.27893078091359 5.81297192454741 4.96043323399192 4.90342274456122 4.81047019257822 4.58909934450105 5.03782136712643 5.02554788126703 3.66175392350436 5.00560418405791 5.78762325877871 6.10162793914596 5.4271296559657 5.69747447568325 5.61854238298395 6.12538180734973 5.64522636889458 5.45055158242603 4.61711627011822 0.210689480987572 0.214425690087976 0.211936293608418 0.210825584216851 0.206322927048639 0.210415285541611 0.225919191555848 0.218154698789581 0.229660872898634 0.215753833621958 0.210208974244194 0.219469517789834 0.217268201828749 0.212345303957896 0.218455021340675 0.209314734025104 0.219212374788233 0.216265028039902 0.216989274093241 5 0|5 /|+ 22388275 22388890 22388500.4 22386321 22389093 + gene protein_coding_gene TRUE TRUE AT5G55120.1 similar to VTC2 (VITAMIN C DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT4G26850.1); similar to unknown [Xerophyta humilis] (GB:AAT45011.1); similar to Os12g0190000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066338.1); contains domain SUBFAMILY NOT NAMED (PTHR20884:SF3); contains domain FAMILY NOT NAMED (PTHR20884) -0.520857597126566 -5.178313976728 0.000345212730106899 1 6.40630758304672 10.1322635885844 -0.520857597126566 0.100551435882347 AT5G57180_at 7.32832519795948 7.43919697836238 7.51503946143295 7.71383022131225 7.8524398859301 7.38619429806835 7.21367852476156 7.49820036779171 6.30039514792894 6.61235257067399 6.90020279081284 7.83908508257421 7.24652130205632 7.09347122282466 7.69736485992939 7.9177038356646 7.22188574038592 6.84049588154515 6.92506963621911 0.191218308345062 0.179052880209910 0.188072534604154 0.180361694937275 0.180959613113075 0.1902262464081 0.181862798883886 0.186913521145295 0.190501405650251 0.189392641939269 0.183067463162689 0.190294851767648 0.181791653070952 0.188141115185495 0.186819720564174 0.180591154203221 0.192013841352422 0.186371124040858 0.187997376529764 5 5|0 +|/ 23186322 23187474 23186593.9 23185068 23188225 + gene protein_coding_gene TRUE TRUE AT5G57180.1|AT5G57180.2|AT5G57180.3 CIA2 (CHLOROPLAST IMPORT APPARATUS 2) Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast. similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.2); similar to Os02g0148000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045888.1); similar to putative stress resistance-related protein [Oryza sativa (japonica cultivar-group)] (GB:ABF00989.1); contains InterPro domain CCT; (InterPro:IPR010402)|similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to putative stress resistance-related protein [Oryza sativa (japonica cultivar-group)] (GB:ABF00989.1); contains InterPro domain CCT; (InterPro:IPR010402)|similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.2); similar to AT5g57180/MUL3_13 [Medicago truncatula] (GB:ABE84577.1) -0.524171610086853 -5.17507179334174 0.000346906124279016 1 6.40220367423347 14.4719616791598 -0.524171610086853 0.102402155669687 AT5G67510_at 8.35112420988752 8.37673758676229 8.82817833595343 8.75051359285089 8.4657965863193 8.2464502577839 7.93236342741066 8.2048301370662 8.05335061663937 7.47405663925769 8.35892643947317 8.79297970232077 8.15944717768814 8.23787799044293 8.88764774028031 8.09600938073515 8.09059118659562 8.22122342997184 8.0844151141245 0.107871500088835 0.111861528786884 0.113961840712022 0.113144101502378 0.109091141692510 0.105867573294548 0.113943887084718 0.112172161639563 0.110818649600830 0.119221401166738 0.111173552319716 0.110921691403924 0.110961411615976 0.111208771777657 0.107951225646074 0.108982448363407 0.119692282207809 0.111506719441322 0.111329125790151 5 5 - 26955256 26955611 26955434.909 26955039 26955677 - gene protein_coding_gene TRUE TRUE AT5G67510.1 60S ribosomal protein L26 (RPL26B) Identical to 60S ribosomal protein L26-2 (RPL26B) [Arabidopsis Thaliana] (GB:Q9FJX2); similar to 60S ribosomal protein L26 (RPL26A) [Arabidopsis thaliana] (TAIR:AT3G49910.1); similar to Ribosomal protein L24/L26 [Medicago truncatula] (GB:ABE77438.1); contains InterPro domain Ribosomal protein L24/L26; (InterPro:IPR005825); contains InterPro domain Ribosomal protein L26, eukaryotic and archaeal form; (InterPro:IPR005756); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain KOW; (InterPro:IPR005824) -0.4557210742315 -5.17466763708581 0.000347117833269765 1 6.40169196647085 16.5075969355604 -0.4557210742315 0.0621646406216297 AT5G18130_at 9.87815092985636 10.1303236519423 10.5957358197099 10.6490437796835 11.4841208148655 10.9664824786501 8.9458052575476 8.87761226924132 7.77895364575174 8.12772204492757 8.92448866320355 8.06536805508153 9.55777511583976 9.36814904378381 7.22310544384813 9.44467116306327 9.62094609859166 9.35225909050645 7.77551282559004 0.174891240955253 0.167749382130560 0.172538587307165 0.173214700442501 0.172320721280279 0.165197142176361 0.172330731361612 0.162772682858757 0.177256227641536 0.180045689306035 0.168130494827402 0.172844778218806 0.167085673030647 0.166031969484287 0.187245453479337 0.168254018283344 0.170992787001030 0.167367928503581 0.187881761748495 5 5 + 5995902 5997108 5996179.182 5995481 5997500 + gene protein_coding_gene TRUE TRUE AT5G18130.1|AT5G18130.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03870.2); similar to hypothetical protein MtrDRAFT_AC156827g15v1 [Medicago truncatula] (GB:ABE86405.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03870.1); similar to hypothetical protein MtrDRAFT_AC156827g15v1 [Medicago truncatula] (GB:ABE86405.1) 0.520904096955458 5.17464711869477 0.000347128585070753 1 6.4016659870712 18.6102384616852 0.520904096955458 0.100763676931081 AT5G52030_at 7.71487802191229 7.91014880275324 8.3352683316336 8.43239773497743 8.35848183408665 8.18821896834235 8.38429410112092 8.35131026331579 7.91530101633312 8.1739353349958 8.44837411681063 8.62411498697625 8.55263936136765 8.79804185949765 8.28073455723807 8.93752516378098 8.6103125971339 8.6478159166654 7.83145945662606 0.110064401217429 0.104730739534462 0.105823559668347 0.108435373795731 0.104730739534462 0.107170085261280 0.109895616182087 0.112027997549056 0.108007110094474 0.108316067297811 0.107014103285983 0.104730739534462 0.105363100617456 0.112754495500899 0.105246860141232 0.104730739534462 0.111406196701159 0.105924989373137 0.107666311356158 5 0|5 /|+ 21146430 21147054 21146686.25 21145355 21147316 + gene protein_coding_gene TRUE TRUE AT5G52030.1|AT5G52030.2 TraB protein-related similar to TraB family protein [Arabidopsis thaliana] (TAIR:AT1G05270.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09227.1); similar to Os08g0545700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062417.1); contains InterPro domain TraB determinant; (InterPro:IPR002816) -0.438198903573391 -5.17356216219556 0.000347697615353903 1 6.4002921594114 16.5023798018939 -0.438198903573391 0.048220549688217 AT5G42540_at 7.29494824331578 7.74267820624832 7.91341786775101 8.05358800718484 8.38024034764023 7.48484272373285 7.39341805233891 7.11253060559533 7.64804650272704 6.90509438521639 7.28628836933952 7.56060198059057 7.45463986890979 7.52390316755313 6.89476658197615 7.476330378886 7.23258161565952 7.46542768443464 7.62428348297368 0.204088326323500 0.197619740453695 0.194788157595364 0.194381308078375 0.193570045927927 0.204060769677730 0.196649349111183 0.200334878030367 0.205246041236112 0.198413758853943 0.190653441179960 0.192643530118929 0.193945859197792 0.207942339241477 0.192388922319092 0.196671563493732 0.197401813701771 0.189667539685097 0.189667539685097 5 5 + 17031244 17031729 17031406.182 17024641 17032029 + gene protein_coding_gene TRUE TRUE AT5G42540.1 XRN2 (EXORIBONUCLEASE 2); 5'-3' exonuclease/ nucleic acid binding Encodes a putative exoribonuclease. similar to AIN1 (ACC INSENSITIVE 1), 5'-3' exonuclease/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G54490.1); similar to XRN3 (5'-3' exoribonuclease 3), 5'-3' exoribonuclease [Arabidopsis thaliana] (TAIR:AT1G75660.1); similar to putative 5-3 exoribonuclease [Oryza sativa (japonica cultivar-group)] (GB:BAB86550.1); similar to PREDICTED: similar to 5-3 exoribonuclease 2 [Bos taurus] (GB:XP_595586.2); similar to Zinc finger, CCHC-type; Putative 5-3 exonuclease [Medicago truncatula] (GB:ABE84268.1); contains InterPro domain Putative 5-3 exonuclease; (InterPro:IPR004859); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) -0.708179792748431 -5.17083083939295 0.000349134513199283 1 6.39683268014628 15.0491041298381 -0.708179792748431 0.181562669813721 AT5G16910_at 7.49533040692432 7.57954769547912 8.70107794049103 8.66790337057954 8.9338454122198 8.77533398808453 6.26840826023713 6.30231905799168 4.9824665398067 5.1103370737879 5.8238714482509 6.03398992385418 6.58051029984828 6.17434347538066 4.87742362702326 6.60534660633307 7.06111667118212 5.66071767699576 4.99009373092678 0.240605125075634 0.243332545132774 0.244397714707419 0.247418939169379 0.249353794744071 0.256435345912801 0.24852096063587 0.254989635182867 0.279050991219524 0.239793330972494 0.239793330972494 0.242861900105414 0.244553159041349 0.244826220254862 0.24881345164694 0.24150148583675 0.24563544354882 0.254689537043615 0.243436472741180 5 5 + 5564695 5565238 5565013.909 5561682 5565583 + gene protein_coding_gene TRUE TRUE AT5G16910.1 ATCSLD2 (Cellulose synthase-like D2); cellulose synthase/ transferase, transferring glycosyl groups encodes a gene similar to cellulose synthase similar to ATCSLD4 (Cellulose synthase-like D4), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G38190.1); similar to ATCSLD5 (Cellulose synthase-like D5), cellulose synthase [Arabidopsis thaliana] (TAIR:AT1G02730.1); similar to CSLD3 (CELLULOSE SYNTHASE-LIKE 3), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G03050.1); similar to cellulose synthase-like protein D4 [Populus tremuloides] (GB:AAO03579.1); similar to putative cellulose synthase [Oryza sativa (japonica cultivar-group)] (GB:AAL58185.1); similar to cellulose synthase D-like protein [Nicotiana alata] (GB:AAK49455.1); contains InterPro domain Cellulose synthase; (InterPro:IPR005150) 0.422607723621078 5.16867044966259 0.000350275522797507 1 6.39409539075437 13.4053694736421 0.422607723621078 0.0321289942397678 AT5G47100_at 3.95578472936924 4.18479530388242 5.60212129395883 5.64504838102529 5.95926507862088 5.97234903045776 4.54025356503316 4.7177421128078 4.18670346600053 4.22005041788006 5.47197429146039 5.57464402186663 5.21281632777755 5.69366941053651 5.30414966176549 5.3044701733729 6.0282863683662 5.401825722172 4.24633848902871 0.230073250723568 0.227193431144703 0.237119287952095 0.233381181585246 0.232736315166781 0.238967861928808 0.228589810552063 0.242917567969961 0.241985247880065 0.231033785560073 0.232007735790812 0.22924498985347 0.234466763196668 0.232730317012890 0.233216849034676 0.231880880906745 0.234140195794080 0.244101918272546 0.228456728010942 5 5 - 19147158 19148886 19147723.182 19146867 19149510 - gene protein_coding_gene TRUE TRUE AT5G47100.1 CBL9 (Calcineurin B-like protein 9); calcium ion binding member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) Identical to Calcineurin B-like protein 9 (CBL9) [Arabidopsis Thaliana] (GB:Q9LTB8); similar to CBL1 (CALCINEURIN B-LIKE PROTEIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G17615.1); similar to calcineurin B-like protein, putative [Brassica oleracea] (GB:ABD64921.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 0.440377612625311 5.1654849243043 0.000351965191881429 1 6.39005768625608 9.930508414295 0.440377612625311 0.050738362092881 AT5G01890_at 3.00040965166314 3.43876853101215 3.00071907311508 2.64095853612876 2.54530194986665 2.73155941130465 3.36551480651796 3.5500253099183 3.9660198124346 3.36753199487445 4.05185145338286 5.19275847449481 4.01484880625057 4.80920018174163 5.31632315975464 4.14944124822838 4.06206746864026 4.1047255062012 3.74406642120882 0.228539608754272 0.221039217826575 0.225428970332041 0.222587292311177 0.221927955474946 0.228817581005096 0.219160682374897 0.229531199724745 0.224717083265052 0.219160682374897 0.219160682374897 0.221829420105802 0.223557552670903 0.228116999769518 0.223157696917123 0.219160682374897 0.225761983751786 0.219160682374897 0.225899159545487 5 5 - 341670 342207 341972.909 341540 345124 - gene protein_coding_gene TRUE TRUE AT5G01890.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G28040.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G56370.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT01367.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB85306.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26311.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.534668949444486 -5.16544932971146 0.000351984120849164 1 6.39001255922177 7.11175288211221 -0.534668949444486 0.108117224758455 AT5G43780_at 9.62703995143778 9.8258574111569 10.6064022866230 10.7969027152743 10.2191201728341 9.99699795998758 8.84834583162817 9.24298366756482 8.50676949097144 9.05944958286634 10.1539847479689 9.53211876608108 10.4186939909423 10.5470066057471 9.11625926029662 10.3696799105843 10.4827149533420 10.3954145950435 8.66696216846653 0.113770357651911 0.113085733026739 0.117186339109363 0.117466397952034 0.116901604964721 0.114740745811663 0.120550694473165 0.120184993815998 0.131791461710202 0.121465718723060 0.111942922050160 0.112275917300556 0.115405341418931 0.122567691433052 0.118400163100042 0.114000128194207 0.121638804266341 0.118586396743668 0.120991206311486 5 5|0 -|/ 17606915 17607735 17607327.5 17606621 17608762 - gene protein_coding_gene TRUE TRUE AT5G43780.1 APS4 sulfate adenylyltransferase, ATP sulfurylase similar to APS3 (ATP sulfurylase 2), sulfate adenylyltransferase (ATP) [Arabidopsis thaliana] (TAIR:AT4G14680.1); similar to APS1 (ATP sulfurylase 3) [Arabidopsis thaliana] (TAIR:AT3G22890.1); similar to APS2 (ATP SULFURYLASE PRECURSOR) [Arabidopsis thaliana] (TAIR:AT1G19920.1); similar to ATP sulfurylase [Brassica juncea] (GB:CAA11417.1); similar to ATP sulfurylase [Brassica juncea] (GB:CAA11416.1); similar to ATP sulfurylase (GB:AAA92350.1); contains InterPro domain ATP-sulfurylase; (InterPro:IPR002650) 0.501914650851509 5.15627597132735 0.000356898699130213 1 6.3783749205115 19.3311451751561 0.501914650851509 0.09171833422504 AT5G08220_at 1.51601871085992 1.24307800943732 1.84688658007709 1.81510068394423 1.71809793574534 1.76860858832676 1.18159829280483 1.26138111148932 1.60660925404421 1.17234674970011 1.76807682388602 1.80566942809256 1.78695553692124 2.45902955541127 1.89807037374516 2.39256203467796 2.30977748084132 2.11670350431746 1.52750686349074 0.174798216574535 0.174896126650181 0.177312774618057 0.174798216574535 0.176554890278746 0.179704228450222 0.175780972652777 0.182894475835503 0.181426886913383 0.179666125978479 0.187128193494462 0.182461022294527 0.184300956021692 0.18481186397632 0.181316621737801 0.180965126255288 0.192256572492832 0.175870753277507 0.179160698973264 5 5|0 -|/ 2642293 2642963 2642771.111 2642281 2642992 - gene protein_coding_gene TRUE TRUE AT5G08220.1 unknown protein 0.438814107107427 5.15332358824847 0.000358495889333783 1 6.37462620460157 3.29514284640975 0.438814107107427 0.0502823105459912 AT5G13480_at 5.04880825526356 5.28392942714922 5.843048979047 5.868393838091 5.66397866281484 6.03913720191289 5.10296332696869 5.17786560910717 4.9140022608382 5.09289092892234 5.32426443680565 4.9554075756157 5.33903790261165 5.03195473302183 5.20180920138763 5.40568175238136 5.24332014035613 5.30765311068617 4.8564086914231 0.209929334092084 0.205865533543910 0.211084094507848 0.203338137487688 0.206810616109177 0.214063718976908 0.206289041873057 0.213039575003696 0.214292052187179 0.211352041825672 0.20332612681617 0.202042244761194 0.215472101209118 0.202042244761194 0.209055457368497 0.205227695420337 0.210795899654950 0.204781163111493 0.203982469292837 5 5 - 4326957 4327568 4327250.273 4326531 4331702 - gene protein_coding_gene TRUE TRUE AT5G13480.1 FY (FY) Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G67320.1); similar to FY protein [Lolium perenne] (GB:AAT72461.1); similar to Os01g0951000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045410.1); similar to putative OsFY [Oryza sativa (japonica cultivar-group)] (GB:ABA12455.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.477062802678957 -5.14876035001038 0.000360979481981969 1 6.3688290595776 10.5938031960457 -0.477062802678957 0.0778320172942698 AT5G47790_at 4.95853717158331 4.13478801677972 5.98070182291493 6.0635084752667 6.40294945510531 6.24099137197587 4.91027088841335 4.70401758312787 3.25147654535802 3.63330293813198 4.65985324649327 4.69611359925581 4.95637539062369 5.35432478791125 5.11924428996265 5.37044155449115 5.39142275870686 5.29456349557883 3.69909363954546 0.174976514758145 0.176157018293040 0.184273287211122 0.181022314681774 0.183766935068030 0.178186272871991 0.175388939777799 0.177922173773582 0.194522397534433 0.187539974882886 0.184055401852862 0.182163302389629 0.174976514758145 0.176038608584809 0.17565193235654 0.185092453423037 0.180595417422803 0.182270197777679 0.177495986243518 5 5 + 19369245 19369779 19369557.364 19368518 19370670 + gene protein_coding_gene TRUE TRUE AT5G47790.1 forkhead-associated domain-containing protein / FHA domain-containing protein similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G38840.1); similar to PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) subunit 8 [Danio rerio] (GB:XP_695210.1); similar to Os08g0326100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061548.1); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984) 0.627064497051683 5.14859677974142 0.000361068845546743 1 6.36862119009766 9.7410956471741 0.627064497051683 0.150287833830040 AT5G47160_at 2.14823272484332 2.34503575999178 2.66667379568541 2.56006287675162 2.07585852907880 2.31673610985185 2.4648764216958 2.28544706345185 2.69070584604536 2.91261593114431 2.26551851909744 2.25189596777868 2.46193790685599 2.59824915892383 2.08701994167544 2.47349393628779 2.58836219926206 2.6569255480802 3.00501572182436 0.172254371117688 0.167824368257591 0.171448989168148 0.174883528680230 0.168234878707059 0.165657185311117 0.167672569250605 0.169693076237758 0.170723388529443 0.166924242528769 0.172407205247115 0.169500789305115 0.169965262151888 0.168475389743725 0.176271139666193 0.164498950550344 0.16843579508065 0.165904949364678 0.164761413946777 5 5 + 19174648 19175177 19174842.273 19173958 19175205 + gene protein_coding_gene TRUE TRUE AT5G47160.1 YDG/SRA domain-containing protein similar to YDG/SRA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G47150.1); similar to histone-lysine N-methyltransferase, putative [Brassica oleracea] (GB:ABD65049.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105) -0.455629300437919 -5.13156739746373 0.000370502355834878 1 6.34695345951991 5.00405102529373 -0.455629300437919 0.0648237514599351 AT5G01510_at 4.50315673125818 5.02026063526875 5.1226523826743 4.5379603456889 6.18502470156967 5.79761621925334 6.22036653075043 5.90734953964147 4.54280523595005 4.86315820609747 5.69086555428575 5.90914419003862 5.47865537530693 5.78096669005879 5.35521718250207 5.6981067247609 5.0713202609567 5.43194065404591 5.34201877804741 0.220078305805656 0.219821779562139 0.226784483312388 0.220719627664990 0.219638288781069 0.237336986196589 0.218741822199458 0.220776956232314 0.229476481324483 0.221159082950371 0.224044403551341 0.220533816348441 0.226040082497551 0.222183029749744 0.228844130647592 0.224126448913900 0.222448351051510 0.229655157730976 0.218887579937114 5 5 + 203686 205105 204240.364 201605 205385 + gene protein_coding_gene TRUE TRUE AT5G01510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45890.1); similar to Protein of unknown function DUF647 [Medicago truncatula] (GB:ABE84675.1); similar to Os01g0141600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041984.1); contains InterPro domain Protein of unknown function DUF647; (InterPro:IPR006968) -0.648779462658665 -5.12885014766339 0.000372031650585136 1 6.34349127786937 10.6458089619428 -0.648779462658665 0.160234619950102 AT5G46710_at 5.00502767471255 5.53408231285512 5.22106894306367 5.23974751045165 5.46257988679217 5.7726031336909 3.2141536326914 3.06968725874263 3.4944390935978 3.21773574745042 4.54270824086815 4.59353154444761 4.46088943206126 4.76179893034093 5.34091015320483 5.01960137803697 4.40906868068751 4.79094002716423 2.99859466481576 0.255249508040619 0.243556106409587 0.253841891110187 0.247329421434104 0.244051621099783 0.240804238326313 0.247462788599752 0.263931042742899 0.255611036191455 0.247444596585387 0.240335923131895 0.251837828024872 0.252276105658291 0.244760985518953 0.260337128952798 0.240335923131895 0.24653510499451 0.243406993573623 0.246060369250271 5 5 - 18970102 18970908 18970592.182 18969843 18971919 - gene protein_coding_gene TRUE TRUE AT5G46710.1 zinc-binding family protein similar to zinc-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17900.1); similar to putative zinc-binding protein [Platanus x acerifolia] (GB:CAL25342.1); contains InterPro domain Protein of unknown function DUF597; (InterPro:IPR006734) 0.532668149173684 5.12743242709923 0.000372832217848878 1 6.34168436319702 8.80329590261139 0.532668149173684 0.109070115865332 AT5G18450_at 2.3703220969131 2.34347589133252 2.72074909825457 3.12593070292535 2.13683530078156 2.24275289111705 2.66940593288336 2.46690168956127 2.93402358111992 3.10933854888451 2.43643413055374 2.47000137895766 3.0760941314477 2.71696823557429 1.90349039474414 2.35090578468132 2.58032306147235 2.92772716616353 2.89014042051664 0.176376233609839 0.171118693212251 0.168647585020078 0.179362436798273 0.169430823307159 0.171239412237174 0.172087321597581 0.168647585020078 0.180093178791214 0.173334691028848 0.175064847215816 0.168647585020078 0.169593613488992 0.173386025524523 0.174049626565116 0.173611423434942 0.176122533544981 0.170404825724118 0.172275939867101 5 5 - 6116230 6116633 6116424.545 6116099 6117022 - gene protein_coding_gene TRUE TRUE AT5G18450.1 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Identical to Dehydration-responsive element-binding protein 2G (DREB2G protein) (DREB2G) [Arabidopsis Thaliana] (GB:P61827;GB:Q6J9S2); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G75490.1); similar to AP2-domain DNA-binding protein [Catharanthus roseus] (GB:CAB93939.1); similar to Os08g0565200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062535.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.479127368307739 -5.12117171557378 0.000376389499025344 1 6.33370063215859 5.27733530994928 -0.479127368307739 0.0806366689596912 AT5G19910_at 4.6143458063051 4.72291468409363 6.26121048031677 6.28409057467344 6.65185495956474 7.49671700435674 4.76163975588296 4.99114204846925 4.22120158531854 3.8686399502809 5.57919533019517 4.911439938998 5.4074381166358 5.80876343869714 4.89177635412302 5.91295435955224 5.40677285574312 5.54467088550154 4.38385976937894 0.206021556374186 0.199637502001326 0.202300821120678 0.198315861354445 0.195409683786066 0.210898248192479 0.195409683786066 0.201524749890783 0.202838808954626 0.214830422234243 0.197045052934095 0.201327552733155 0.199881013903543 0.204635210941728 0.195409683786066 0.195409683786066 0.197827952635306 0.200634382486699 0.199067458715062 5 5|0 -|/ 6731347 6732610 6731987.111 6731187 6732894 - gene protein_coding_gene TRUE TRUE AT5G19910.1 SOH1 family protein Identical to Probable mediator complex subunit SOH1 [Arabidopsis Thaliana] (GB:Q8VYB1); similar to Os10g0564100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065408.1); similar to Os07g0164600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058961.1); similar to hypothetical protein DDBDRAFT_0186404 [Dictyostelium discoideum AX4] (GB:XP_638330.1); contains InterPro domain SOH1; (InterPro:IPR008831) 0.629026785467925 5.11692714798357 0.000378821716713781 1 6.32828390185934 10.5183778366696 0.629026785467925 0.152717566670668 AT5G61640_at 7.36216909211793 7.5407190818313 8.94625004551575 9.16459339583966 9.26997069097082 9.17170837355672 7.46930134795614 7.54690297511049 6.0556464593372 6.09372257038635 7.29297487283608 6.84030906336648 7.56544280407851 7.58741903475313 6.37016553525404 7.36127447431492 7.62095638389504 6.88002895601408 5.82870168074821 0.240537342955606 0.236222137746524 0.240262305077014 0.255592510629929 0.257753702664756 0.243682965751536 0.239013926023736 0.241621041851101 0.240935957777096 0.255859136569647 0.237342994142192 0.236222137746524 0.242894741569108 0.245916192687424 0.245148202130665 0.236303644702759 0.243060051183893 0.245613815365237 0.248902559343099 5 5 + 24792385 24793277 24792698 24792261 24793616 + gene protein_coding_gene TRUE TRUE AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins similar to PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G07470.1); similar to peptide methionine sulfoxide reductase [Capsella rubella] (GB:AAR15455.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 0.439346966071962 5.11658938547979 0.000379015976668677 1 6.32785272507616 14.9002076890563 0.439346966071962 0.0534039551073614 AT5G66090_at 6.99414654282544 7.09171680271261 7.27172328808326 6.93576119267995 8.03273056115174 7.37593742361678 7.57454319540954 7.59455298429547 7.04941169276856 7.40404706806986 8.11648016612123 8.00976194794597 7.93107516482954 8.36865183476939 7.99708673318835 8.20611290721698 7.42701577602537 7.93888697774291 7.35876905797691 0.187148333603986 0.173225892748463 0.187157590779624 0.179111408714685 0.180373179936139 0.188605915763958 0.173078430700259 0.178258265760739 0.189893385384159 0.169098086856875 0.168745904076767 0.169546223440736 0.173688111464612 0.178207800163288 0.175310814277330 0.170224911012707 0.169934421608652 0.168745904076767 0.172838437903703 5 5|0 +|/ 26443105 26444126 26443641.778 26442962 26444398 + gene protein_coding_gene TRUE TRUE AT5G66090.1 similar to Os09g0541700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063816.1); contains domain no description (G3D.3.40.50.1420); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) -0.572965464498335 -5.1106645189718 0.000382440849606293 1 6.32028589487636 14.9939522712227 -0.572965464498335 0.128826162512895 AT5G43910_at 7.06387047038907 6.83338483694872 8.36721714617014 8.4440568531874 6.7812046929904 6.67517233639369 3.07281268168397 3.21844729349955 4.24848829520661 3.9419966532393 4.21673481153207 4.42495962593444 3.74892145505594 4.28061744056291 4.08970461091427 4.10172928322869 4.62162704262374 4.1169335672923 3.6420348478448 0.270600034605393 0.272252981547696 0.26011975616081 0.266877527553431 0.261341604813327 0.263930071363643 0.262576370560139 0.268205259682268 0.263446569133592 0.254438024735013 0.261386001075203 0.254438024735013 0.262814975380526 0.254438024735013 0.266047157998173 0.257658899955578 0.265681339225642 0.254438024735013 0.263000656790365 5 5|0 -|/ 17684991 17686324 17685475.625 17684537 17687466 - gene protein_coding_gene TRUE TRUE AT5G43910.1|AT5G43910.2|AT5G43910.3 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.3); similar to Carbohydrate kinase, PfkB [Medicago truncatula] (GB:ABE82653.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Ribokinase; (InterPro:IPR002139)|similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G28706.3); similar to Os08g0566400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062541.1); similar to Carbohydrate kinase, PfkB [Medicago truncatula] (GB:ABE82653.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) 0.436788694268678 5.10150934106103 0.000387797784868296 1 6.30858112469191 10.3791841614445 0.436788694268678 0.0523416035358849 AT5G47120_at 10.8082057652470 11.1281823494831 11.9699021802441 12.1265142364210 11.7238829542334 11.3892330813940 10.4525232733846 10.4702669078188 9.38515797792095 9.19949664150082 10.1837739163932 10.3001727295258 10.5484392080979 10.3761854692081 9.90691164688764 10.4849550660982 10.5028156343616 10.3503923922060 9.04823720420612 0.113334872614780 0.114389788751915 0.118768175720320 0.115810629892387 0.115653660329107 0.118845486784827 0.114967403016313 0.114809155219616 0.125298524341654 0.120771818670142 0.116750362250832 0.113217275012173 0.113217275012173 0.117311528090894 0.119033902169136 0.113217275012173 0.122791956387642 0.118008894014287 0.124479696579667 5 5 + 19153915 19154647 19154306.727 19153250 19155169 + gene protein_coding_gene TRUE TRUE AT5G47120.1 ATBI-1 (ARABIDOPSIS BAX INHIBITOR 1) Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. Identical to Bax inhibitor 1 (BI-1) (AtBI-1) (BI-1) [Arabidopsis Thaliana] (GB:Q9LD45); similar to Bax inhibitor-1 family protein / BI-1 family protein [Arabidopsis thaliana] (TAIR:AT4G17580.1); similar to Bax inhibitor 1 [Brassica napus] (GB:AAK73101.1); contains InterPro domain Bax inhibitor 1; (InterPro:IPR006213); contains InterPro domain Protein of unknown function UPF0005; (InterPro:IPR006214) 0.483663982469374 5.09732713961912 0.000390271359456595 1 6.30322922425712 21.0299236930565 0.483663982469374 0.0846408440419016 AT5G14730_at 1.60851976656891 1.64259934194416 2.03428163135849 2.00732326239042 2.25378024056865 2.54486643636004 0.978647063699344 1.04227149209676 1.54520716911838 1.28518301404833 1.50520877971157 1.74371325540643 1.65809915209913 1.89014619834509 1.15652208642472 1.83462401755264 0.981587203008506 1.66377708341587 1.20216496784089 0.161656174471125 0.163516774540227 0.162784267974048 0.167253283813216 0.161223199533628 0.163868174796843 0.163312969940219 0.163805783237495 0.163531816545686 0.168910625588448 0.166396440168830 0.162312386797871 0.163568745201034 0.164914844684869 0.171874173460352 0.162849671314845 0.160430438337597 0.164527822409411 0.165611785903469 5 5 + 4756463 4756977 4756721.727 4756221 4757660 + gene protein_coding_gene TRUE TRUE AT5G14730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01513.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84838.1) 0.435263510968204 5.08688982203812 0.00039651789894918 1 6.28985903533319 3.21323354053903 0.435263510968204 0.0521085416267777 AT5G54620_at 0.997305983229505 1.16839281599931 1.98940565293981 2.07753296518223 1.66633441507287 1.92678595532402 1.15150392330392 0.764523708278797 1.34150594610573 1.5150350576123 1.93290384253190 1.23360757483694 1.63257743916012 1.48545020011208 1.69487536817711 1.96436988289398 1.88047809224488 1.80993075749679 1.38300431669361 0.190708902945976 0.197798997852703 0.189760148715124 0.193154630528178 0.193910475188692 0.191477472540817 0.192782449962589 0.192758262834641 0.210025846507678 0.19244487170688 0.192801083723423 0.196517262971960 0.193174204283205 0.199046129096489 0.195587667088299 0.196582786889139 0.189760148715124 0.208364202798455 0.190289288814997 5 5 - 22204987 22205492 22205310 22204987 22206972 - gene protein_coding_gene TRUE TRUE AT5G54620.1 ankyrin repeat family protein similar to ANK (ANKYRIN), protein binding [Arabidopsis thaliana] (TAIR:AT5G54610.1); similar to Ankyrin [Medicago truncatula] (GB:ABE88815.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.486694820737227 5.08028872672558 0.000400523257300599 1 6.28139293791059 3.02645113649244 0.486694820737227 0.0873241822927465 AT5G45040_at 5.25645912485661 5.29295337993768 4.37423670475659 4.70279290290418 5.0921618585078 5.2860261976801 5.58591012160749 5.14945034220854 3.56461433028797 4.24133248510306 4.71241808646487 6.2579009779836 5.12529657173286 5.25789563028276 6.42126319544938 5.73451864243213 5.26721077451217 4.51668493135477 4.61033166729356 0.248458552244493 0.247329442718387 0.257655184646216 0.257466901715735 0.243070081932407 0.255236048723876 0.245594129877109 0.245686126947342 0.246902578859293 0.251635796382754 0.243344360136310 0.246486697822333 0.248717623694049 0.246410776307242 0.246050034646062 0.241266763232795 0.25349686401652 0.245032330173815 0.247030181138448 5 0|5 /|- 18192798 18193835 18193171 18192598 18194115 - gene protein_coding_gene TRUE TRUE AT5G45040.1 cytochrome c6 (ATC6) Identical to Cytochrome c6, chloroplast precursor (Soluble cytochrome f) (Cytochrome c553) (Cytochrome c-553) (Cytochrome c-552) (Atc6) (petJ) [Arabidopsis Thaliana] (GB:Q93VA3;GB:Q8SKV3;GB:Q9FL93); similar to electron transporter protein [Brassica rapa] (GB:ABK56012.1); contains InterPro domain Cytochrome c, monohaem; (InterPro:IPR009056); contains InterPro domain Cytochrome c, class I; (InterPro:IPR003088); contains InterPro domain Cytochrome c region; (InterPro:IPR012282) -0.51064585692851 -5.07748397880093 0.000402238080410102 1 6.27779339738445 9.86770287680975 -0.51064585692851 0.100515048117475 AT5G17210_at 2.53768341320134 2.08853602477219 2.85921782582532 2.72486879054983 2.92899849827241 3.25297005320524 2.42203007754154 2.20319749092657 1.71409919973252 1.86178263864947 2.92914937623065 2.82961694184614 2.95898628133914 2.54126587676635 2.90193249429951 2.68853980400258 2.97082122202724 2.65890128348446 1.97685195184191 0.211890133659906 0.210159111902273 0.207434974130697 0.211474208319526 0.21260835202721 0.214084430435414 0.213724991140867 0.213793992806457 0.215964744703539 0.212726220267626 0.209579829625605 0.212325579975205 0.207250073278816 0.210983842248432 0.214502285426639 0.207250073278816 0.217383879663853 0.210486100706576 0.217463319759175 5 5|0 +|/ 5656571 5657886 5657556 5656385 5658149 + gene protein_coding_gene TRUE TRUE AT5G17210.1|AT5G17210.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13380.1); similar to unknown protein [Saussurea involucrata] (GB:ABC68264.1); similar to Os06g0114700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056606.1); similar to Os05g0434800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055640.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61065.1); similar to unknown protein [Saussurea involucrata] (GB:ABC68264.1); similar to Os06g0114700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056606.1); similar to Os05g0434800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055640.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606) 0.520406267857116 5.07532796637459 0.000403561564017817 1 6.27502546660601 4.95759423349054 0.520406267857116 0.105638257989398 AT5G54440_at 6.9390401631722 7.45902184909158 7.39266260997322 7.5852881904017 7.8495739427016 7.6191911283678 7.26634804139267 7.2216685135099 7.39633305600622 7.47946168597479 8.21377036593796 8.33554335354123 7.85291571753191 8.02257638180686 7.75752985733705 7.79858848998709 7.69937195584247 8.17597237372896 7.50573239267235 0.165607578093586 0.163618312388540 0.167155673008864 0.166662818102872 0.162716260191760 0.164654665143203 0.158446842038889 0.168408366079653 0.175784002688227 0.16202359610663 0.171138018735917 0.169024916281651 0.158862411466429 0.168818387453488 0.159748391541221 0.159259811435403 0.175433467206772 0.168356639530505 0.165279143132465 5 5 + 22124208 22124897 22124606.273 22117162 22125059 + gene protein_coding_gene TRUE TRUE AT5G54440.1 binding similar to Os12g0554400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066991.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.517427310523897 -5.07386072072686 0.000404464885934636 1 6.2731413106479 15.1378706082507 -0.517427310523897 0.104201050117547 AT5G64140_at 8.79955587062548 8.97612651746903 9.05849573301414 8.92494143478735 9.06387334933683 8.98956628763469 8.84176780172048 9.01787053126872 8.08725029386711 8.62374668951375 9.29818349107306 9.4983975859387 8.7496332807972 9.08866444842353 9.6706597881081 8.90809217106602 8.71240572341759 8.82864951017989 8.71849290680384 0.113988313152513 0.116679001009678 0.115924267636821 0.116185444122671 0.116867991581953 0.115284555592804 0.111324230017295 0.127180982494408 0.126793471106316 0.112178569414164 0.119127088877076 0.116133391290623 0.115345184996583 0.116221550688412 0.117362276797047 0.109050907944908 0.119104727291502 0.115372489203332 0.120908837457695 5 5 - 25684775 25684922 25684844 25684550 25685518 - gene protein_coding_gene TRUE TRUE AT5G64140.1 RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome Encodes a putative ribosomal protein S28. Identical to 40S ribosomal protein S28-2 (RPS28C) [Arabidopsis Thaliana] (GB:P34789); similar to 40S ribosomal protein S28 (RPS28A) [Arabidopsis thaliana] (TAIR:AT3G10090.1); similar to 40S ribosomal protein S28 (RPS28B) [Arabidopsis thaliana] (TAIR:AT5G03850.1); similar to ribosomal protein small subunit 28 [Helianthus annuus] (GB:AAM78552.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10101.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10104.1); contains InterPro domain Ribosomal protein S28e; (InterPro:IPR000289) -0.432385690053881 -5.0733795915503 0.000404761564170962 1 6.27252338691165 17.7444408807006 -0.432385690053881 0.0506159464322074 AT5G33290_at 8.65112870813175 8.7554882438815 9.41743639746587 9.23234776802165 9.39020834648528 8.88584943706787 5.28543971935602 5.33371497211521 5.64727625868208 5.06106453936337 5.47048923708132 5.62123771696744 6.1307083912061 6.38884469022257 5.56135475527195 6.60737649572627 6.40013568276694 6.03335536057834 4.81432195833489 0.257292078477726 0.255627521075107 0.256675435698695 0.256810523564035 0.256591076853429 0.261104311319587 0.250982211050269 0.250982211050269 0.258227463316367 0.250982211050269 0.252402452812792 0.250982211050269 0.250982211050269 0.250982211050269 0.251673400462383 0.250982211050269 0.250982211050269 0.252328720633899 0.263793400107872 5 5 + 12578507 12578988 12578744.636 12575486 12579250 + gene protein_coding_gene TRUE TRUE AT5G33290.1 XGD1 (XYLOGALACTURONAN DEFICIENT 1); catalytic similar to catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G42180.1); similar to exostosin family protein [Capsella rubella] (GB:ABA18105.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.499898077190829 5.07243114557104 0.000405347080221856 1 6.27130515719584 13.7194060540762 0.499898077190829 0.095078872335119 AT5G02010_at 3.95598189812646 4.03958450982795 3.29367436255749 3.39284538212495 4.17385868867812 4.76408268310057 3.61403660135559 3.44769912433275 4.2390881712814 3.67523940644152 4.07030799845472 4.82699410158983 3.71942808545844 3.93881936235191 4.04170808913945 4.28099670740332 3.54383124483265 3.96390047395752 3.52692575111165 0.216984673805639 0.215003707120933 0.221774278476116 0.228614113620573 0.211208857046700 0.217120363575019 0.211208857046700 0.226574043263437 0.221757851984264 0.216809431139899 0.219360948893857 0.217928294547390 0.211208857046700 0.22047111222199 0.219662754965025 0.211653445655386 0.224162963905006 0.211208857046700 0.212592328614892 5 5 + 385291 385669 385455.364 383150 385847 + gene protein_coding_gene TRUE TRUE AT5G02010.1 ATROPGEF7/ROPGEF7 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. similar to ATROPGEF5/ROPGEF5 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT5G05940.1); similar to Os01g0849100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044808.1); similar to Os05g0454200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055718.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAG13489.1); contains InterPro domain Protein of unknown function DUF315; (InterPro:IPR005512) -0.525645151173944 -5.07148299409691 0.000405933313148090 1 6.27008714428834 7.76622009001799 -0.525645151173944 0.108467704584013 AT5G53120_at 9.92685358106263 10.1866015318973 11.6107773054434 11.4686215517418 10.5208042909888 10.3030125939942 10.5877925937986 10.6336093696787 8.1527102811173 9.19869713693729 9.984392524325 9.56895103832773 10.4433476712389 10.4512503774965 9.46878108515044 10.4581042107683 10.8707448026948 10.5618339941077 8.58819234317123 0.118391493143415 0.115997031664369 0.113433167936142 0.116219146049312 0.114195393114107 0.113075911710935 0.116860487796988 0.117139765074761 0.136819563210289 0.121047389811612 0.120113011215751 0.117668425179641 0.113393206957197 0.114985638532649 0.123701658609702 0.113075911710935 0.118804059185259 0.114692242980455 0.127720072552111 5 5|0 +|/ 21554003 21554833 21554498.625 21551776 21555042 + gene protein_coding_gene TRUE TRUE AT5G53120.1|AT5G53120.2|AT5G53120.3|AT5G53120.4|AT5G53120.5 SPDS3 (SPERMIDINE SYNTHASE 3) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. similar to SPDS1 (SPERMIDINE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT1G23820.1); similar to spermine synthase [Malus sylvestris] (GB:BAE19758.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) 0.44913289620434 5.06971520231555 0.000407028726195167 1 6.26781577520203 20.0909885857035 0.44913289620434 0.0641026002505135 AT5G35570_at 3.80427157163406 4.36178813057389 4.99167125644301 5.61167119290202 6.4611869516607 5.79108736087845 4.7386880337878 4.66608966711699 3.70937568934152 2.79835917313728 4.84303138872165 5.48077260210164 4.82637121254872 5.24207319438536 4.59715837399194 5.03489467925816 4.56402969670216 4.54938036228186 2.80048697307056 0.276789539650122 0.267911551642418 0.288281179316418 0.271393574836761 0.269830291369423 0.281389787444938 0.283604944768223 0.267911551642418 0.282672126186205 0.272289066420755 0.267911551642418 0.267911551642418 0.270578397807622 0.269475635351645 0.279598359812543 0.270185023773776 0.276957223272063 0.274965167490796 0.273681135807063 5 5|0 -|/ 13768295 13769380 13768682.3 13766941 13770688 - gene protein_coding_gene TRUE TRUE AT5G35570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37980.1); similar to Os09g0442900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063294.1); similar to Plant protein family, putative [Medicago truncatula] (GB:ABE88136.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) 0.704134882597217 5.06723434296861 0.000408571285980023 1 6.26462726611469 9.05078404592398 0.704134882597217 0.185542413725508 AT5G40450_at 9.79997715220198 9.8445400778727 10.7779118496819 10.7722345922243 11.3841073061443 11.0662983845294 9.2130545425726 8.75842222122469 10.5474328073708 10.3139591454315 11.7876796996003 10.9746920607147 11.0308616261415 11.3132505900017 10.9225846554009 11.0359795315238 10.5641234289737 11.3099072798735 10.5392596726693 0.098505414860762 0.0972390980678887 0.097469537813709 0.100341824058097 0.101272084228275 0.104442280007189 0.0984688456487799 0.108818149109625 0.111043491279389 0.0984813123083935 0.101258782180248 0.0982964165134907 0.101105746638918 0.0961461002572533 0.094530897688602 0.0984161111853367 0.0951085528013514 0.100503644854305 0.094530897688602 5 5|0 -|/ 16202034 16202633 16202276.8 16201878 16212849 - gene protein_coding_gene TRUE TRUE AT5G40450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to erythrocyte membrane-associated (GB:AAF15293.3) 0.501290825131575 5.06343771354807 0.000410943996609915 1 6.25974553206292 20.9942026328995 0.501290825131575 0.096307858076691 AT5G25910_at 1.94528287448478 2.12884230446986 3.23347342772764 3.07442915706056 2.86118651053995 2.30118206721785 0.816636062148021 0.981503092873673 1.68469959772666 1.61440540706231 1.21820218674193 1.39675653810847 1.38532272575986 1.73515838444278 1.51972960139126 1.56981321835025 1.73585705412698 0.978610819820264 1.21096589445433 0.230572825583578 0.226011441360618 0.238248375441011 0.241877243022508 0.231637682381268 0.221471275393910 0.231231210413350 0.221643250668899 0.219587892225757 0.222108555103089 0.221770808640109 0.223095702171075 0.228461521442632 0.224689261981402 0.230509471986946 0.219587892225757 0.224157046788583 0.232169503363330 0.219587892225757 5 5 + 9040865 9041339 9041076.091 9038863 9041380 + gene protein_coding_gene TRUE TRUE AT5G25910.1 disease resistance family protein putative disease resistance protein induced by chitin oligomers. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G25930.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G11080.1); similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT3G11010.1); similar to Hcr2-p3 [Lycopersicon pimpinellifolium] (GB:AAX19025.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.526555066062304 5.06184200811 0.000411945596691011 1 6.25769298985495 3.64071107831887 0.526555066062304 0.109418627910511 AT5G45750_at 8.41659380502959 8.5136173926981 8.27631986707353 8.313657425487 8.86994016065446 8.62021704927448 6.76683585905989 6.68186794835738 7.36875810680984 6.2612690694975 8.69543951309228 8.80756573552669 7.80997694971578 8.55575707645189 8.79037343308972 6.9440194619031 7.23577577205952 8.00448664551127 5.0806886190615 0.190416224202740 0.189979327662719 0.192884605462760 0.187932897204800 0.183408734578769 0.196736783766228 0.193038720455253 0.188164815987383 0.193340352214495 0.192585584862271 0.186531132189329 0.181270859759365 0.193063525301562 0.181270859759365 0.183343338405649 0.187281698784010 0.190089099591857 0.188454789499707 0.204315605158200 5 5 + 18577437 18577842 18577663.818 18576343 18578069 + gene protein_coding_gene TRUE TRUE AT5G45750.1 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding similar to AtRABA1d/AtRab11B/AthSGBP (Arabidopsis Rab GTPase homolog A1d), GTP binding [Arabidopsis thaliana] (TAIR:AT4G18800.1); similar to putative GTP-binding protein [Gossypium hirsutum] (GB:AAT64010.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.429337919763458 5.05799528026228 0.000414370795720511 1 6.25274309770268 15.2285459827252 0.429337919763458 0.0490660628336445 AT5G54280_at 5.01350920011258 4.67456990968059 4.83405112868751 5.00316038303502 5.53713807298991 5.48391683760237 5.20617884418641 5.04219575185959 4.64823801418363 5.35613720659405 6.30193089945766 6.79201838161008 6.3418709577306 5.884548418641 5.9144566204809 6.19629764874555 5.97638586542294 6.02589584366653 6.11500598106185 0.242481572826557 0.237582914847410 0.24285605683624 0.233805672699200 0.229999849526804 0.230126226970399 0.233544607134236 0.231673777295827 0.236075397610153 0.229999849526804 0.234695487973464 0.230609079873159 0.233970115628684 0.235117730443256 0.239023114786832 0.229999849526804 0.232191778427606 0.236624285374754 0.235732832534959 5 0|5 /|- 22056983 22057283 22057159.8 22056609 22063524 - gene protein_coding_gene TRUE TRUE AT5G54280.1|AT5G54280.2 ATM2 (ARABIDOPSIS THALIANA MYOSIN 4) Type VII myosin gene similar to ATATM (myosin 1), motor [Arabidopsis thaliana] (TAIR:AT3G19960.1); similar to VIIIB (Myosin-like protein VIIB), motor [Arabidopsis thaliana] (TAIR:AT4G27370.1); similar to VIIIA (Myosin-like protein VIIA), motor [Arabidopsis thaliana] (TAIR:AT1G50360.1); similar to myosin VIII ZMM3 [Zea mays] (GB:AAD31926.1); similar to IQ calmodulin-binding re (GB:ABE84244.1); similar to putative myosin [Oryza sativa] (GB:AAL31066.1); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048)|similar to ATATM (myosin 1), motor [Arabidopsis thaliana] (TAIR:AT3G19960.1); similar to VIIIB (Myosin-like protein VIIB), motor [Arabidopsis thaliana] (TAIR:AT4G27370.1); similar to VIIIA (Myosin-like protein VIIA), motor [Arabidopsis thaliana] (TAIR:AT1G50360.1); similar to myosin subfamily VIII heavy chain [Petroselinum crispum] (GB:AAG49341.1); similar to IQ calmodulin-binding re (GB:ABE84244.1); similar to putative myosin [Oryza sativa] (GB:AAL31066.1); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.459315678172591 -5.05509151179842 0.000416211533043634 1 6.24900482748454 10.8754913393939 -0.459315678172591 0.0720208389105228 AT5G54100_at 3.10182866072293 3.53536754676211 4.59036218983529 4.20058410149538 3.92707524291883 2.77314400446913 5.04172426751356 5.45730787808488 3.01583017633767 3.29099990523269 3.57665431594942 2.75083099926124 3.22631624187087 3.12436150639028 3.02207218709102 2.87040869331413 2.56357439337968 3.30589071637884 2.89822798827801 0.413101817576615 0.388702612950691 0.409119647568649 0.427573345550517 0.388702612950691 0.405610714050967 0.39143523829097 0.427359731919383 0.388702612950691 0.388702612950691 0.423326574363546 0.388702612950691 0.388702612950691 0.388702612950691 0.388702612950691 0.388702612950691 0.391204747589299 0.388702612950691 0.388702612950691 5 0 / Inf -Inf NA 21971013 21973768 - gene protein_coding_gene TRUE FALSE AT5G54100.1 band 7 family protein similar to band 7 family protein [Arabidopsis thaliana] (TAIR:AT4G27585.1); similar to stomatin-like protein [Zea mays] (GB:AAF68388.1); contains InterPro domain Stomatin; (InterPro:IPR001972); contains InterPro domain Band 7 protein; (InterPro:IPR001107) -0.832252439059507 -5.04871951448028 0.000420281308885163 1 6.24079630488967 7.14010739730221 -0.832252439059507 0.235007339144545 AT5G02870_at 10.2404168557622 10.3604655639623 10.5767149858153 10.6329617214469 10.2137635179786 10.2903220646353 10.4043501174048 10.7106735883565 10.2552554295737 10.2775903673000 10.6084040935592 10.9352428355013 10.4623136815052 10.4400807453113 11.0830210187570 10.4260333360452 10.2881234816328 10.4281991590533 10.0852906863716 0.0732944101249089 0.0732451186194725 0.0755742501850642 0.075806003068048 0.0777911296407514 0.0757818984799847 0.0764739985847233 0.075436736429805 0.0767148146407167 0.0797868495365683 0.0757220182922399 0.0752588932558863 0.0755705832685544 0.0805697358187797 0.0757368842367716 0.0737045937310146 0.0795319468453702 0.0733982370866426 0.0761738340061939 5 5 + 658456 659499 658934.909 657784 659731 + gene protein_coding_gene TRUE TRUE AT5G02870.1 60S ribosomal protein L4/L1 (RPL4D) Identical to 60S ribosomal protein L4-2 (L1) (RPL4D) [Arabidopsis Thaliana] (GB:P49691;GB:Q9LYZ8); similar to 60S ribosomal protein L4/L1 (RPL4A) [Arabidopsis thaliana] (TAIR:AT3G09630.1); similar to putative 60S ribosomal protein L1 [Trifolium pratense] (GB:BAE71290.1); similar to putative 60S ribosomal protein L1 [Trifolium pratense] (GB:BAE71215.1); similar to 60S ribosomal protein L4 (L1) (GB:Q9XF97); contains InterPro domain Ribosomal protein L4/L1e; (InterPro:IPR002136); contains InterPro domain Ribosomal protein L4/L1e, archeabacterial like; (InterPro:IPR013000) -0.440680566859630 -5.04742495193648 0.000421113291474204 1 6.23912773541634 20.8236949460881 -0.440680566859630 0.0592622323127276 AT5G64930_at 7.8306773988454 8.06949520729127 8.73428705542902 8.79561208993628 8.97759089340033 8.92004864370038 8.22895201294352 8.60169374042593 8.70420070944803 8.55137211508797 8.81774553569963 8.62246912843415 8.74991125964032 8.78771116590744 8.36899308054938 9.12541241290858 8.30737024441638 8.5031575202457 8.56436413663189 0.168641305400875 0.151968267566354 0.153440562864249 0.153161241896274 0.159403965469314 0.160219892894289 0.165025969418984 0.153771012202711 0.177359591732537 0.163665165642525 0.151968267566354 0.153347131365755 0.157318392399074 0.168832871634926 0.164282561320842 0.151968267566354 0.172569269118414 0.162146853525600 0.160530388946573 5 5 - 25963136 25963655 25963356.636 25962938 25965567 - gene protein_coding_gene TRUE TRUE AT5G64930.1 CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5) Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR). Identical to Protein CPR-5 (Protein constitutive expression of pathogenesis-related genes 5) (Protein constitutive expression of PR genes 5) (Protein hypersenescence-1) (CPR5) [Arabidopsis Thaliana] (GB:Q9LV85;GB:Q8W3U8); similar to HYS1-related [Medicago truncatula] (GB:ABE89402.1) -0.467638270434509 -5.04450564167277 0.000422995879215307 1 6.23536391517987 17.1532906038454 -0.467638270434509 0.0779787870300781 AT5G06540_at 2.21637375176569 2.24806855131674 2.36245210772950 2.55376675713281 1.84705371951699 2.0589524927094 2.23949819989826 2.27660528672016 2.78945025283037 2.93723226275722 2.37021493986233 2.30661282710626 2.40126146356527 2.66978707711713 2.19297773192437 2.46286419351827 2.44595032505593 2.89103798592607 2.57688875169300 0.173086945169794 0.170028882414304 0.173379279397734 0.174014589325389 0.171508076716610 0.171917328191403 0.179021141969121 0.177655677828717 0.175783761612310 0.176913871269516 0.174088370626445 0.173163455934030 0.180387361328089 0.170757087060036 0.174477006992920 0.173083225028756 0.173876146903208 0.177413054871632 0.171338268082272 5 5 - 1999187 1999730 1999457 1999182 2001050 - gene protein_coding_gene TRUE TRUE AT5G06540.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to Asp/Glu racemase; Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83029.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.428928327391912 -5.03935127499761 0.000426341634047351 1 6.22871473931544 4.84306906190019 -0.428928327391912 0.0501213276847066 AT5G13150_at 3.18405665837707 3.55670208644418 3.86361981625805 3.76109145742632 2.59788996007913 3.0669969702622 2.66887756662991 2.83646250021591 3.19707434770175 3.32487870550935 2.44492455468613 2.70534898555755 2.93602454214043 2.9103912220367 3.03283702004516 2.90155380296940 3.0088143104301 3.55334964338022 3.32640268150673 0.216710888221622 0.219611120860953 0.222986844555357 0.218888986168819 0.218711687466295 0.216865449859153 0.221835443677014 0.219600965605333 0.220878657880739 0.211366730823167 0.236763785674631 0.210487828294885 0.211547792666487 0.225914009441422 0.230113675705088 0.226737017254875 0.227841420796001 0.227026813753800 0.220207232690292 5 5 - 4172983 4173541 4173249.091 4172832 4174933 - gene protein_coding_gene TRUE TRUE AT5G13150.1 ATEXO70C1 (exocyst subunit EXO70 family protein C1); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70C2 (exocyst subunit EXO70 family protein C2), protein binding [Arabidopsis thaliana] (TAIR:AT5G13990.1); similar to Os12g0165600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066242.1); similar to Os11g0167600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065840.1); similar to unnamed protein product [Solanum lycopersicum] (GB:CAA78112.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.523542482981383 -5.03882255217855 0.000426686418166398 1 6.22803241297227 6.30168250449242 -0.523542482981383 0.109109939879410 AT5G42560_at 7.28733667840973 7.04892306085782 8.48055042991296 8.51775444309729 8.64317015446822 8.57186162653755 6.41399059900063 6.23809427684902 5.84273028000816 5.86824798329398 7.04097187975398 6.96022338467816 7.22941956575675 7.06023446569358 6.96631881913867 7.08037375085942 7.42120245312076 6.98881538887075 6.23549356407059 0.191527979359207 0.183894629740402 0.188696844080661 0.183229303025758 0.188178648283913 0.191856411577988 0.181445754650412 0.189859096908325 0.205379297000814 0.186903043885857 0.185272604822132 0.181445754650412 0.189749813528515 0.183619175298168 0.188565192409822 0.181445754650412 0.197143794676481 0.183429240488503 0.194632115558683 5 5 + 17033480 17034014 17033845.909 17032151 17034480 + gene protein_coding_gene TRUE TRUE AT5G42560.1|AT5G42560.2 abscisic acid-responsive HVA22 family protein Identical to HVA22-like protein i (AtHVA22i) (HVA22I) [Arabidopsis Thaliana] (GB:Q8LE10;GB:Q9FH69); similar to abscisic acid-responsive HVA22 family protein [Arabidopsis thaliana] (TAIR:AT1G19950.1); similar to TB2/DP1, HVA22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65940.1); similar to Os03g0132300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048869.1); similar to TB2/DP1, HVA22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP52418.2); contains InterPro domain TB2/DP1 and HVA22 related protein; (InterPro:IPR004345) 0.43214846353836 5.03655425111146 0.000428168954973394 1 6.22510456048865 14.1880112782791 0.43214846353836 0.053127954825497 AT5G41560_at 5.76359686270322 6.06589674407942 7.17612127676742 7.21891616796696 7.75936295891252 7.68066235308722 5.50323417010934 5.70445656474125 5.3939740962826 5.59556477434719 6.6949697188724 6.68795510932969 6.72323720486619 6.67349721456208 6.90998692847338 6.95197369852442 6.44618037478452 6.25756315691601 5.17932697852252 0.200824035786419 0.197275170494756 0.204065099644660 0.203453381810704 0.214865617211141 0.203369829204947 0.223926475937076 0.202740944486093 0.214213414421084 0.199822167305503 0.202400234277822 0.200819240826646 0.201659545216903 0.206668540383023 0.206217776954791 0.199928748510654 0.218286118415936 0.211435127302894 0.213053953729602 5 5|0 -|/ 16638658 16639818 16639127 16638479 16639884 - gene protein_coding_gene TRUE TRUE AT5G41560.1 similar to Os03g0125700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048819.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93748.1) 0.444202373806871 5.0043561725897 0.000449812961009766 1 6.18344479989288 12.6379270750502 0.444202373806871 0.0647281951741359 AT5G20510_at 2.39972675543840 2.57049088509378 3.24956211278914 3.50508141361365 4.83330214128578 4.25653266814009 2.55332017687658 2.29316682478306 2.29605489820000 3.17927401212035 3.20264122327408 3.26556580215748 3.94025249834296 3.06707380967321 3.33576559416200 3.67856048384936 3.32036252334326 2.88959054058477 2.9230538767022 0.308212225224979 0.306536240986623 0.298819548795986 0.298819548795986 0.309961180830886 0.307065053283273 0.305142994605043 0.298819548795986 0.301650258266846 0.308170113334413 0.298819548795986 0.29966845244241 0.306882317912829 0.298819548795986 0.299814189253117 0.298819548795986 0.305817686847261 0.30359787903837 0.298819548795986 5 5 - 6940093 6941914 6941327.143 6939815 6942910 - gene protein_coding_gene TRUE TRUE AT5G20510.1 PHD finger family protein similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G42790.1); similar to PHD2 [Glycine max] (GB:ABI97241.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.545397815567297 5.00032038990237 0.000452606642970371 1 6.17820996603342 6.27611661646801 0.545397815567297 0.121729323915275 AT5G23890_at 7.85673892082115 7.68621914585863 8.24108137874253 7.74065905734344 7.88362043653215 7.69209372891384 7.81131779133208 7.4372544190755 7.30337776825675 7.69255953284093 8.13490937728714 8.26206308376211 7.7353884907574 7.99040081959671 8.11307409653942 7.97098575998436 8.11045049432816 8.20913269505473 7.29238334631431 0.148914564114933 0.144813909858841 0.148700109702622 0.149757939921377 0.145594660150049 0.146907943212971 0.154688288235074 0.142686171078432 0.148740447759122 0.142686171078432 0.152740157503525 0.147238856074415 0.15169662106584 0.148450380551851 0.145055347548395 0.153810595192970 0.147163863599517 0.144434027382532 0.142697757283805 5 5|0 +|/ 8062313 8062973 8062674 8058692 8063204 + gene protein_coding_gene TRUE TRUE AT5G23890.1 similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT5G52410.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44759.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1) -0.535171444733621 -4.99945882035508 0.000453205425672019 1 6.17709204203853 15.5412435188113 -0.535171444733621 0.116873461057517 AT5G48400_at 3.11446538136245 3.48666431314169 5.06489880959287 5.68145843700479 2.23576750552561 2.37698562417082 1.02390179844989 1.36299672104728 1.01977115288637 1.18198356928812 1.26885163333665 1.19430396142797 1.29078367666816 1.07527146767871 1.07331326943553 1.25669516047067 1.36053132898284 1.03127540817117 1.50274871690808 0.234674887596166 0.221514043054474 0.255623342290894 0.250098127497768 0.225508690183456 0.219695454663162 0.219695454663162 0.219695454663162 0.226700023707771 0.223961379303865 0.222729261859876 0.219695454663162 0.225437468205855 0.223429012608289 0.227794815481075 0.220969904447670 0.223496609956098 0.219695454663162 0.226106634541873 5 5|0 +|/ 19635801 19636414 19636132.6 19633470 19636472 + gene protein_coding_gene TRUE TRUE AT5G48400.1|AT5G48400.2 ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) (GLR1.2) [Arabidopsis Thaliana] (GB:Q9LV72;GB:Q8LGN3); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa (japonica cultivar-group)] (GB:BAD34106.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320)|Identical to Glutamate receptor 1.2 precursor (Ligand-gated ion channel 1.2) (GLR1.2) [Arabidopsis Thaliana] (GB:Q9LV72;GB:Q8LGN3); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4) [Arabidopsis thaliana] (TAIR:AT3G07520.1); similar to GLR1 (GLUTAMATE RECEPTOR 1) [Arabidopsis thaliana] (TAIR:AT3G04110.1); similar to Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum] (GB:AAP03877.1); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.583656250534937 4.98745322314726 0.000461637184772711 1 6.16150042753669 4.25774868276975 0.583656250534937 0.139907577744564 AT5G59550_at 6.1098614129349 7.17194933298795 8.00462394778225 8.39521320730868 7.91760924164216 7.91309569177439 5.42124991075464 5.83636630617486 6.32926855896687 5.30153141585465 7.69095112140271 7.95349170227897 7.3294796485868 7.43744352855137 6.87667561496911 7.48061768157838 6.9978172258192 7.57960850510486 5.64367149598732 0.245003022517476 0.235883133013505 0.236240481256361 0.237883371883927 0.234785413104041 0.246613109168278 0.249191048559424 0.239168312119275 0.236715637469248 0.248670596066794 0.234785413104041 0.237983002414255 0.237983832735265 0.234785413104041 0.246559841789672 0.234785413104041 0.23944895264249 0.240842948157706 0.239527225735913 5 5 - 24015658 24016200 24015976.091 24015485 24017019 - gene protein_coding_gene TRUE TRUE AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G46620.1); similar to Zinc finger, RING-type; Thioredoxin-related; RINGv [Medicago truncatula] (GB:ABE81988.1); contains InterPro domain Protein of unknown function DUF1117; (InterPro:IPR010543); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.751935815900481 4.98589453245448 0.000462744023907553 1 6.15947427068918 13.6844550241563 0.751935815900481 0.208596039811276 AT5G11650_at 7.00080517425911 7.58368619300483 8.0777147370214 8.42595275262079 8.21752109431016 7.93281697731787 8.04004995879885 8.27063119818732 7.21812449433603 7.19540931962736 7.37508812939093 7.3762639433212 7.82290127579512 7.99800729094647 6.27289095100388 8.27663270677633 7.76748247759708 7.46392910334005 7.17779505253462 0.179285981250981 0.179620673450504 0.182397773287748 0.194668014553483 0.178049463514526 0.182781165783444 0.178645360905351 0.185212550906451 0.197672411025726 0.178515514518404 0.176215579013240 0.176409636423834 0.17367473442781 0.180869928086655 0.22315922202293 0.172809485883484 0.194758440578186 0.181222561745832 0.187240425952505 5 5|0 +|/ 3746040 3746789 3746493.6 3744981 3747126 + gene protein_coding_gene TRUE TRUE AT5G11650.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G73480.1); similar to Os09g0394700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063095.1); similar to Os01g0199400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042310.1); similar to putative monoglyceride lipase [Oryza sativa (japonica cultivar-group)] (GB:BAD26447.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.568933052081301 -4.98334420242498 0.000464561107512326 1 6.15615813474385 15.3142768141587 -0.568933052081301 0.133515249662518 AT5G54760_at 11.456328431215 11.6434861059263 12.4130468495008 12.4945468687866 12.4008894876607 12.2889634214044 11.5774049223556 11.6604966200722 11.3052791450734 11.2067329295211 12.3865770642175 12.0692716483093 12.3364322096557 12.2229186879720 12.1259222186652 12.3298360971709 12.3704773959406 12.1369847808652 11.1047756359985 0.0743848005220791 0.0713222958798112 0.0744070934586992 0.0726508377033717 0.072035954130936 0.0788489577914586 0.0713222958798112 0.0713561431365645 0.0759721655631025 0.074075591375248 0.0747868763163159 0.0716880087101149 0.073583991954745 0.0741838588158976 0.0751028203825945 0.0716265975818564 0.0777191329733799 0.0727490939077556 0.0750524260090549 5 5|0 +|/ 22262203 22262573 22262347 22261090 22262963 + gene protein_coding_gene TRUE TRUE AT5G54760.1 eukaryotic translation initiation factor SUI1, putative Identical to Protein translation factor SUI1 homolog 1 [Arabidopsis Thaliana] (GB:P41568;GB:Q9SLK5); similar to eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] (TAIR:AT4G27130.1); similar to Protein translation factor SUI1 homolog (Translation initiation factor nps45) (GB:Q9SQF4); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950); contains InterPro domain Eukaryotic translation initiation factor SUI1; (InterPro:IPR005874) 0.416183935300599 4.97905709484134 0.000467632696489509 1 6.15058108400834 23.7183445465555 0.416183935300599 0.0427770416777822 AT5G41460_at 2.28541070623245 2.06028746809856 2.09245404865601 2.31105397644297 2.21422667190457 2.01829156524953 3.07652108712769 3.03154935881389 2.45860975088787 3.14258823984628 2.70041905374689 3.62631452875124 2.75797143189993 3.14489298796956 3.52882830942526 3.05103201728316 2.62560906928419 3.64551386034056 3.08116435551650 0.186232712766598 0.187407561792902 0.187964078187390 0.187200528154311 0.197532180198648 0.190948463179777 0.190047023952256 0.197876375590026 0.192769404054300 0.194213033646223 0.189072835694686 0.193609909009653 0.188820418075014 0.198082141163843 0.188313741281348 0.189828742702153 0.191552166136733 0.187955650366991 0.186232712766598 5 5|0 -|/ 16607195 16607681 16607456.7 16606826 16609469 - gene protein_coding_gene TRUE TRUE AT5G41460.1 fringe-related protein similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G23490.1); similar to transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G11350.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); contains InterPro domain Protein of unknown function DUF604; (InterPro:IPR006740) -0.441502470164852 -4.97759349302192 0.00046868624948297 1 6.14867634769702 5.40082108002629 -0.441502470164852 0.0644914675831266 AT5G59850_at 9.4847565832881 9.64446880978134 9.69129336321719 9.94539847859531 9.57431092909412 9.39521081213048 9.94235856482837 10.1047326836999 8.95295283285787 8.80773584922095 9.50538844210961 10.1139025435198 9.38860779646643 9.38803869289552 9.99046319225524 9.24041279495357 9.23642569170133 9.20304284148953 8.66705469876507 0.122568552630715 0.122905499142962 0.124825834618198 0.120251563940678 0.12190591256235 0.119237100194027 0.128007645364798 0.122265862911814 0.128203733070476 0.125009254329907 0.125635032019149 0.118610390849793 0.120844661547260 0.123334714179208 0.127202072358367 0.1190237328382 0.129482364091553 0.122817808161608 0.126333444203109 5 5 - 24129733 24130276 24129990 24129426 24130843 - gene protein_coding_gene TRUE TRUE AT5G59850.1 40S ribosomal protein S15A (RPS15aF) Identical to 40S ribosomal protein S15a-1 (RPS15AF) [Arabidopsis Thaliana] (GB:P42798;GB:Q7GD83); similar to RPS15A (RIBOSOMAL PROTEIN S15A), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G07770.2); similar to unknown [Solanum tuberosum] (GB:ABA46758.1); contains InterPro domain Ribosomal protein S8; (InterPro:IPR000630) -0.444240107169149 -4.97407488669056 0.000471229379400319 1 6.14409565367291 18.8815827995986 -0.444240107169149 0.066692225509649 AT5G63120_at 5.88319752559117 5.51355545111416 6.82590708995361 6.89934279605102 6.93592079232093 6.7378016163527 5.71929455799066 5.60881736267274 3.98166889634146 3.99137724426503 5.48246868568453 5.15104611800433 5.4800256580641 5.92166267251714 5.9424605109539 5.43551435847222 6.19535988359308 5.57687158156918 3.81381102789475 0.227257262672593 0.225123254908747 0.225632348862275 0.225305031336577 0.228737044574203 0.23286285054899 0.224411956016368 0.227807177666063 0.256631198686425 0.235935374697985 0.233229306688289 0.224411956016368 0.224411956016368 0.227441974680810 0.232414921535472 0.224411956016368 0.235396317106383 0.232782347008566 0.233817887172989 5 5|0 -|/ 25337180 25338060 25337581.875 25335978 25339491 - gene protein_coding_gene TRUE TRUE AT5G63120.1|AT5G63120.2 ethylene-responsive DEAD box RNA helicase, putative (RH30) Identical to DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.1.-) (RH30) [Arabidopsis Thaliana] (GB:Q8W4R3;GB:Q9FML1;GB:Q9ZRZ7); similar to DEAD box RNA helicase, putative (RH20) [Arabidopsis thaliana] (TAIR:AT1G55150.1); similar to Os01g0911100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045158.1); similar to putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD82427.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629)|Identical to DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.1.-) (RH30) [Arabidopsis Thaliana] (GB:Q8W4R3;GB:Q9FML1;GB:Q9ZRZ7); similar to DEAD box RNA helicase, putative (RH20) [Arabidopsis thaliana] (TAIR:AT1G55150.1); similar to DEAD box RNA helicase [Zea mays] (GB:AAR29370.1); similar to putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD82427.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 0.457607997973179 4.96768148500634 0.000475887831220499 1 6.13576674331555 11.0540439355597 0.457607997973179 0.0761213322587514 AT5G13280_at 6.11403734547455 6.07726570143882 6.15912191797318 6.21886871326804 6.52230297890006 6.58773208607177 5.94750634747357 6.32719833335294 5.7023550575601 6.2748473333849 7.08411002272567 7.82032189785597 6.81906398141799 6.8818970693485 7.44686918362043 6.68599878000207 6.47692129638174 6.9024466903686 6.22922003969284 0.203413582341175 0.205673824087685 0.206728171287351 0.205061088144061 0.208948927829646 0.225856040405695 0.211289702024059 0.205894258135598 0.23742596772207 0.203701117496632 0.207579686754370 0.205727919668698 0.205323916752561 0.220595451849667 0.205218992315428 0.205339080126182 0.225634695110600 0.219065584605972 0.202374604179868 5 5|0 +|/ 4251590 4252617 4252212.2 4249441 4252839 + gene protein_coding_gene TRUE TRUE AT5G13280.1 AK-LYS1 (ASPARTATE KINASE 1) Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH). Identical to Aspartokinase 1, chloroplast precursor (EC 2.7.2.4) (Aspartate kinase 1) (AK1) [Arabidopsis Thaliana] (GB:Q9LYU8;GB:O23152); similar to CARAB-AK-LYS (Lysine-sensitive aspartate kinase), amino acid binding / aspartate kinase [Arabidopsis thaliana] (TAIR:AT5G14060.2); similar to aspartate kinase, lysine-sensitive, putative [Arabidopsis thaliana] (TAIR:AT3G02020.1); similar to putative aspartate kinase [Oryza sativa (japonica cultivar-group)] (GB:AAO20063.1); similar to putative precursor monofunctional aspartokinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84902.1); similar to precursor monofunctional aspartokinase [Glycine max] (GB:AAD41796.1); contains InterPro domain Aspartate kinase region; (InterPro:IPR001341); contains InterPro domain Aspartate/glutamate/uridylate kinase; (InterPro:IPR001048); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain Aspartate kinase; (InterPro:IPR012150) -0.445181528217781 -4.96754982239083 0.000475984276644988 1 6.13559514496053 12.7860097240413 -0.445181528217781 0.0677722377390561 AT5G63420_at 5.48141123794144 5.31444535621992 6.24084710513165 6.28690314949006 7.3853273339473 6.77026794613996 4.48009333046956 4.06192777053817 3.90082803854687 4.10218341677681 4.75672012364507 5.10840169362267 5.4944697241956 4.68906357155477 5.88374137759452 5.07881266619212 5.34263631567141 4.97019830287156 3.93181044980699 0.184190754470277 0.181904325302484 0.187655172543719 0.188077339751108 0.184597712690701 0.190266310963956 0.183644848017563 0.181810550807754 0.184484340888114 0.188758485956271 0.182338698840903 0.184386921768253 0.179697572784057 0.1847855357261 0.179697572784057 0.182606956036604 0.185862087418527 0.181945442434951 0.186161844734083 5 5|0 +|/ 25419808 25423003 25421793.632 25417612 25423194 + gene protein_coding_gene TRUE TRUE AT5G63420.1 EMB2746 (EMBRYO DEFECTIVE 2746); catalytic similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase [Medicago truncatula] (GB:ABE82019.1); similar to Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; Homeodomain-related [Medicago truncatula] (GB:ABE78925.1); similar to putative metallo beta subunit lactamase [Oryza sativa (japonica cultivar-group)] (GB:BAD28842.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain RNA-metabolising metallo-beta-lactamase; (InterPro:IPR011108); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.563894108242429 4.96533704765323 0.000477608281416816 1 6.13271073040512 10.3245426238824 0.563894108242429 0.132152959293605 AT5G48820_at 3.58743854826157 3.31899499524785 3.49266146481360 3.87936631290965 2.43937641618172 3.22565994544717 3.01389440074560 3.51862308695522 3.69281632236293 3.84577227502916 3.40157858270566 3.26251269681254 3.08042488238904 3.76161011810768 3.60972316170536 3.37012954807469 4.40109297835652 3.44368588700722 3.38055163784666 0.228233963194677 0.225158354993364 0.224391347741951 0.236330326806791 0.225858737831759 0.225415832300853 0.232686719200924 0.230616947393191 0.227804227048825 0.224394982840184 0.229846066720453 0.221074789320732 0.232837119006853 0.226527566650162 0.221074789320732 0.221074789320732 0.224416684958445 0.247630005617936 0.228410393585377 5 5 - 19809869 19811479 19810885.818 19809834 19811572 - gene protein_coding_gene TRUE TRUE AT5G48820.1 ICK6 (KIP-RELATED PROTEIN 3) Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. similar to KRP4 (KIP-RELATED PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT2G32710.2); similar to p27KIP1-related-protein 2 [Solanum lycopersicum] (GB:CAD29649.1); contains InterPro domain Cyclin-dependent kinase inhibitor; (InterPro:IPR003175) -0.67867818132478 -4.96464412251609 0.000478118041550619 1 6.13180730287712 6.90003096814084 -0.67867818132478 0.181054832289211 AT5G63680_at 8.20420064925508 8.42193651589694 9.50337232122265 9.36399427284464 9.11927320379677 8.82615753564104 7.22184813622163 7.34193963190896 6.38455489688553 6.63007296564253 7.71769585970065 7.78478293100973 7.79669181568624 7.65198287929022 7.77798690324065 7.7341424070237 7.76288187765255 7.76209052355799 6.0642732384661 0.188291630249153 0.180501193270349 0.179711351972344 0.180307767719608 0.186097098714086 0.187030073518839 0.177565028771391 0.182225844254497 0.195615479347487 0.196618491773125 0.180117032086376 0.180300402690731 0.177639412164209 0.176392981332848 0.181081977366429 0.176392981332848 0.182555799710406 0.188115908714123 0.192994696956581 5 5 + 25509177 25509572 25509392.455 25507299 25509978 + gene protein_coding_gene TRUE TRUE AT5G63680.1 pyruvate kinase, putative similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26390.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56350.1); similar to pyruvate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G08570.1); similar to pyruvate kinase [Glycine max] (GB:AAM94349.1); similar to pyruvate kinase [Glycine max] (GB:AAM94348.1); similar to Pyruvate kinase, cytosolic isozyme (PK) (GB:Q42806); contains InterPro domain Pyruvate kinase, beta-barrel-like; (InterPro:IPR011037); contains InterPro domain Pyruvate kinase; (InterPro:IPR001697) 0.449006255777042 4.96217721304373 0.000479937545151492 1 6.12859027899827 15.5544230833368 0.449006255777042 0.0707566981487291 AT5G65830_at 1.86879180878712 2.14855263141634 2.89940709680142 2.98231853611736 3.69385740861970 3.01624025552905 2.9439872810954 2.96026605850435 2.42692327977005 2.13775176428438 3.00944175317061 3.10685894763988 3.43337835119114 2.94846578297737 3.22586425782849 3.62305331204344 3.25566562769942 3.23425806596071 1.7286268083825 0.187888438717862 0.190889935111675 0.196340359130800 0.210808558503158 0.191957786743092 0.191715211838060 0.190813365709808 0.195902949459943 0.194823956042761 0.20171628696809 0.192875436297652 0.19237301164041 0.190844302075087 0.200929723283855 0.190014924621877 0.187888438717862 0.206726720090737 0.192936913685989 0.197540164179872 5 5 - 26359627 26360188 26359969.364 26359342 26360547 - gene protein_coding_gene TRUE TRUE AT5G65830.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49750.1); similar to Os05g0414700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055553.1); similar to Os09g0131200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062623.1); similar to receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAX95167.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.552780153715629 4.95207016160444 0.000487469136925009 1 6.11539861485946 5.4778729078386 0.552780153715629 0.127705715764520 AT5G13630_at 13.1053241155660 13.1111191301144 13.2762736041176 13.1786634315296 13.0384401787948 13.0884881650969 13.8220006353173 13.8123986414845 14.1428014836294 14.1666778325440 14.5674176592871 14.5690208342378 14.2131653372032 14.3374063897948 14.5525394827834 14.2912433633130 14.1439223756906 14.6095631984151 14.0472936207965 0.0528931466321751 0.0519203897379172 0.051594727583182 0.051594727583182 0.051594727583182 0.0534965827688396 0.0531026883404124 0.051594727583182 0.0678305685175097 0.0525206479112262 0.0534321277297376 0.0527842463039627 0.0563425925977402 0.0547350515655574 0.0548804174874255 0.0528422743322454 0.0535749036659931 0.0570978099205198 0.0533518242190887 5 5 - 4387644 4388182 4387904 4387337 4392230 - gene protein_coding_gene TRUE TRUE AT5G13630.1|AT5G13630.2 GUN5 (GENOMES UNCOUPLED 5) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. similar to Mg protoporphyrin IX chelatase [Nicotiana tabacum] (GB:AAB97152.1); similar to protoporphyrin IX:Mg Chelatase [Antirrhinum majus] (GB:CAA51664.1); similar to magnesium chelatase subunit [Glycine max] (GB:CAA04526.1); contains InterPro domain CobN/magnesium chelatase; (InterPro:IPR003672); contains InterPro domain Magnesium-chelatase, subunit H; (InterPro:IPR011771) -0.39691402981466 -4.94881721150555 0.000489919745342032 1 6.11114900106682 27.5688180589596 -0.39691402981466 0.0190818387461336 AT5G57660_at 11.2864762689507 11.3111555514608 11.9747425320941 11.9790451960991 12.4283339225041 12.3156152760187 11.4545929169777 11.4139874302046 11.1824441988536 10.9837451681086 12.3168724974572 12.2257728866743 12.184000713538 12.2135414684398 11.8683782063791 12.2391328125498 12.1217860872688 11.7332269904806 11.0548352204779 0.072464706353831 0.0695770807840992 0.0755446106245924 0.0717097230256875 0.0724038037781904 0.0761176903850775 0.0759297591396788 0.0748817465092763 0.078781193206551 0.0717178158026978 0.0710215099601989 0.0698296759200502 0.0739755458613983 0.0715235299806388 0.0744456058567306 0.0695770807840992 0.0722860766030496 0.0720522253482993 0.0706883985401726 5 5|0 +|/ 23373306 23373931 23373694.7 23372690 23374215 + gene protein_coding_gene TRUE TRUE AT5G57660.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 5 (COL5) [Arabidopsis Thaliana] (GB:Q9FHH8;GB:Q8L9H4;GB:Q93ZC8); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT5G24930.1); similar to Zinc finger, B-box; CCT [Medicago truncatula] (GB:ABE83395.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.397896485249238 4.94878547740366 0.000489943716426266 1 6.1111075347188 23.3637505469530 0.397896485249238 0.0211819747791935 AT5G60030_at 4.31057188049084 3.55519347927251 4.42447962496594 3.89003006096531 4.21364404848777 3.66978888168633 4.25163413678984 3.6396438437928 4.81808845239341 5.23033045601052 5.78641675328539 5.33205950142376 5.05833886376269 5.25421134839933 5.09529817020664 5.59247124582261 4.70062471509078 4.9978359395763 5.34367983380694 0.200276660216837 0.191208533362799 0.187875096252559 0.192085777068203 0.189613142222883 0.189147180129431 0.196452507907645 0.196036099785777 0.189261534319035 0.191845064062696 0.188647042028572 0.203798102695751 0.199376854841104 0.195246358760342 0.192749862865185 0.197650478152737 0.20197052622324 0.198384139967524 0.191481000210602 5 5 - 24189399 24189873 24189716.273 24189308 24190201 - gene protein_coding_gene TRUE TRUE AT5G60030.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to PREDICTED: hypothetical protein [Mus musculus] (GB:XP_983740.1) -0.758871362481536 -4.94215335271704 0.000494980825365577 1 6.10243751692152 9.17330156852286 -0.758871362481536 0.213814862275443 AT5G46340_at 5.62125204813431 6.15794427619143 7.29236516108395 7.35879318184895 8.38042325957645 7.4269397388439 6.14939522920134 5.70030865422216 5.21597616356697 5.14560834987949 7.22360647484603 6.99556828025563 7.38204370215416 7.55133789807751 6.37197990532678 7.59457816184076 7.4122485742091 6.67031071286393 5.51710057563442 0.271075537388564 0.264173403093041 0.294639769774166 0.270405843322899 0.274385643391251 0.292161375312401 0.278934968235058 0.268415324855333 0.293983475017245 0.268332196885537 0.273663355823933 0.264173403093041 0.264173403093041 0.272975438156757 0.279909416625927 0.264173403093041 0.286836398286074 0.274497978055364 0.266625058786322 5 5|0 -|/ 18813634 18814640 18814015.6 18813153 18817321 - gene protein_coding_gene TRUE TRUE AT5G46340.1 O-acetyltransferase-related similar to O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT2G34410.2); similar to acetyltransferase-related [Arabidopsis thaliana] (TAIR:AT1G29890.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06550.2); similar to Os05g0582100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056436.1); similar to Os01g0631100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043644.1); similar to O-acetyltransferase (ISS) [Ostreococcus tauri] (GB:CAL56376.1); contains InterPro domain Cas1p-like; (InterPro:IPR012419) 0.736026556734817 4.94188138319191 0.000495188554573417 1 6.10208181002491 12.982479815333 0.736026556734817 0.204999360173986 AT5G64260_at 7.48475385650556 7.71951997981678 8.03964636193033 7.94222871169077 8.4266149695395 8.48373118274052 4.91436688906787 5.81097421979969 6.6893246225432 5.4255964641408 8.27745536218254 7.68612253914347 8.26325429023044 7.75822682296748 7.62572505112694 7.46785591943535 6.84825619624142 7.60782454795393 6.27270206115773 0.162772906701568 0.160964214533868 0.165043100170428 0.164812006678771 0.164392354263110 0.172043947045502 0.169253057532555 0.168375466665614 0.170470632714849 0.175967088425764 0.162211400109052 0.159646002301942 0.159646002301942 0.171731767345252 0.161790419814115 0.161449438244229 0.171059270673437 0.165322885762922 0.171077915575148 5 5 + 25721575 25722073 25721857.182 25721155 25722542 + gene protein_coding_gene TRUE TRUE AT5G64260.1 phosphate-responsive protein, putative similar to phosphate-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G09440.1); similar to erg-1 [Solanum tuberosum] (GB:AAP42136.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) 0.628029618367094 4.93963434029178 0.000496908375909825 1 6.09914241422742 14.2632534249401 0.628029618367094 0.161578971867446 AT5G35400_at 4.030210998147 4.38381495873209 4.60303147586539 4.40289862085024 4.53998494634593 4.37551574643822 4.03666525926799 4.26579422819917 3.60049456819801 3.72362082692617 3.81321730016273 4.28364719591174 4.10097021210147 4.04454432425654 4.69828142577196 4.07766428920771 3.63095509682270 3.88585547968809 3.97827156612567 0.200634402010781 0.211919741816092 0.204409543544341 0.203709616105918 0.203417421146591 0.204991687954386 0.200634402010781 0.208831220201895 0.200634402010781 0.200634402010781 0.207169007514625 0.204007790261891 0.203208522129772 0.205598877999543 0.200747163809056 0.210375214276324 0.206895578277316 0.201027747887611 0.201148727954232 5 5 - 13616695 13618054 13617140.125 13616450 13619496 - gene protein_coding_gene TRUE TRUE AT5G35400.1 tRNA pseudouridine synthase family protein similar to tRNA pseudouridine synthase family protein [Arabidopsis thaliana] (TAIR:AT3G06950.1); similar to tRNA pseudouridine synthase [Medicago truncatula] (GB:ABE79212.1); contains InterPro domain tRNA pseudouridine synthase; (InterPro:IPR001406) -0.470042326774689 -4.93696882475702 0.000498956695840059 1 6.09565443831436 8.24691664718424 -0.470042326774689 0.0855945796217078 AT5G07320_at 5.37854259305477 5.68601061410236 5.83999987578947 5.66156233431291 5.87790646562572 5.87280517200153 5.39684975586177 5.8657188627891 5.30984239903159 5.31424567233992 6.20423777053886 6.58464832250188 5.76938640134002 6.41498266358749 6.69065172594129 5.88817323504605 5.40312426049549 5.94292466967448 5.37181728515254 0.207021392443759 0.203921651394852 0.204341322706482 0.198931855947204 0.202829244321995 0.210292991163968 0.204358473691101 0.216504274307588 0.217296102352247 0.211389267835749 0.205534089574364 0.203361285546925 0.207958659573875 0.202864253986380 0.206369056967352 0.206773159458219 0.227966037784158 0.216288083902037 0.208062148341593 5 5|0 +|/ 2311377 2312019 2311692 2309912 2312288 + gene protein_coding_gene TRUE TRUE AT5G07320.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G61810.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); similar to Os06g0604500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058018.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Graves disease carrier protein; (InterPro:IPR002167); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.498069342146896 -4.92800337988128 0.000505912122561027 1 6.08391334800225 11.4195417508499 -0.498069342146896 0.101829223256058 AT5G25280_at 10.8697857448163 11.0777096286954 11.9032602836973 11.8694635547251 12.2858297694713 12.0279866727648 10.7315100986491 10.8929174147921 10.3161674564747 10.2655066990518 11.0909122092838 10.8932524166597 11.5838630349722 11.2025925226811 10.7449163309822 11.7084264069857 11.6760364553575 11.1380770381978 10.5375732910048 0.094781594782404 0.0931560275490741 0.098161327074333 0.0934243192394304 0.0966228655144719 0.0970300994052117 0.0978066119941262 0.0965648106817896 0.108557347774781 0.101235197299230 0.0954590046942961 0.0926600410585225 0.0935934636960944 0.0954431403452144 0.0986914890801643 0.0926600410585225 0.0985357147253105 0.096318334006971 0.099968104405868 5 5 + 8773972 8774496 8774209.455 8773792 8776003 + gene protein_coding_gene TRUE TRUE AT5G25280.1|AT5G25280.2 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G11090.1); similar to hypothetical protein MtrDRAFT_AC152347g10v1 [Medicago truncatula] (GB:ABE87377.1) 0.436390490692557 4.92694685637415 0.000506738519482899 1 6.08252878683775 22.2712289129850 0.436390490692557 0.0640325511886438 AT5G22360_at 8.48831895400485 8.65801326723845 9.68284647532727 9.5578661605606 9.84166673640902 9.72751680497866 8.51182258780748 8.45068978476585 7.8668486323056 7.80394397907321 9.26862289326695 8.90219013523027 8.83090251732278 9.03688716717902 8.9417622092954 8.95893994855111 9.06332778056855 9.06144826507676 7.55665848895917 0.157979875936818 0.153909998109213 0.159937721081606 0.161186001991394 0.165054846391673 0.167078197091522 0.159286487307455 0.160392102399323 0.190336280236288 0.167166199022885 0.159691607878897 0.160664615729942 0.157789313046520 0.154829122599372 0.158989127552269 0.154468926468564 0.165830137145173 0.159043988040683 0.174738602963342 5 5|0 -|/ 7404395 7405543 7405092.1 7404007 7405742 - gene protein_coding_gene TRUE TRUE AT5G22360.1 ATVAMP714 (Vesicle-associated membrane protein 714) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Identical to Vesicle-associated membrane protein 714 (AtVAMP714) (VAMP714) [Arabidopsis Thaliana] (GB:Q9FMR5;GB:Q93Z99); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to Os10g0154000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064184.1); similar to Putative synaptobrevin-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM14694.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 0.411551100262190 4.92330566660435 0.000509597580520835 1 6.07775552650842 17.4900895037235 0.411551100262190 0.0428056458314183 AT5G61830_at 6.48466885682197 6.32247870336978 6.36410139893326 6.45273927093447 7.58908911466993 6.95930177485597 6.58113569900185 6.7897515869264 6.03504476842474 5.76365870330356 6.7229743570397 7.23501015908387 6.54798574118278 7.18383681983988 6.48618497105333 6.86167750050217 5.86623947823735 6.5134719176218 6.03481533443877 0.206286026295651 0.207724795989129 0.206808646217832 0.202936040860522 0.199896132921513 0.209194795739348 0.210888547093943 0.196858887724831 0.213329735311343 0.203414726758675 0.198995397558874 0.20306003787656 0.196491753197317 0.204009499947788 0.198460393511769 0.196491753197317 0.214822004129932 0.205507898498983 0.196491753197317 5 5 + 24855360 24855945 24855703.545 24854528 24856196 + gene protein_coding_gene TRUE TRUE AT5G61830.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G51030.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE80213.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -0.531584215869731 -4.9218692158721 0.000510730178176426 1 6.07587182308806 13.0037477440854 -0.531584215869731 0.119183665420897 AT5G56590_at 4.01634857574515 4.2395624240033 4.43722662320637 4.49787289484716 5.34143310184791 5.29593028797576 5.0053020099658 5.28812343015723 4.19492943913246 4.63839371604699 5.45725158270377 5.78623138654512 5.10308702329363 5.62455150980606 6.02682749142397 5.34621603879532 5.22764892087502 4.45993565014475 5.20084099655221 0.234788216774367 0.227125472123301 0.220797752704924 0.220116643637174 0.219136426657058 0.237000066833931 0.227246629392200 0.229877681291968 0.228140278541885 0.221809338744493 0.220960633316627 0.223006096004782 0.221174842584991 0.218476552670163 0.22479627075176 0.218513119908702 0.244441067594059 0.231583692344658 0.218476552670163 5 5 + 22925952 22926614 22926246.818 22924545 22926785 + gene protein_coding_gene TRUE TRUE AT5G56590.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 13 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 13) ((1->3)-beta-glucanase 13) (Beta-1,3-endoglucanase 13) (Beta-1,3-glucanase 13) [Arabidopsis Thaliana] (GB:Q9FJU9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G29360.1); similar to Os01g0739700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044198.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91576.1); similar to beta-1,3-glucanase [Medicago sativa] (GB:ABD91577.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.434719851440888 -4.91286981876518 0.000517886898081512 1 6.06406200496087 9.79373662731476 -0.434719851440888 0.0637162864742939 AT5G18150_at 6.12247799933892 6.48985068409561 6.50584985976652 6.65697387591391 6.94152355851962 6.73298782466496 5.86493683261722 5.92225647957526 6.06377584181236 6.24888184810676 6.8894312114315 7.01678561253674 6.76098106260456 7.0941359433934 6.52673438604166 6.92498550687647 6.33290018082307 6.72977211723251 6.32462775872741 0.179516656950217 0.168702545572167 0.173387461207386 0.179286726338767 0.176013011161393 0.184862996520181 0.178323487546069 0.174902000371025 0.205246732993917 0.170289503867925 0.169038606119391 0.167911223347797 0.172213305181581 0.175357569668431 0.176962376066013 0.167911223347797 0.183692897116025 0.179924909274149 0.169087296626882 5 5 - 6000048 6000300 6000196.6 6000016 6000333 - gene protein_coding_gene TRUE TRUE AT5G18150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58375.1); similar to hypothetical protein MtrDRAFT_AC156827g5v1 [Medicago truncatula] (GB:ABE86386.1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133:SF1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133) -0.455536954161998 -4.90901614309093 0.000520983931559964 1 6.05900045085359 12.9030542570613 -0.455536954161998 0.078272349341145 AT5G51970_at 10.0230636535320 9.8468375411014 10.5554136287866 10.5418489383302 10.8214630164808 10.5456920201507 10.1167639079382 10.0184396210460 10.2319774301840 10.4791541114421 10.0875999472542 9.78665195354823 10.112995939803 10.2570331128548 9.92678331782311 10.4107491694821 10.3487417102327 10.3475088018015 10.3398146840019 0.08573305015401 0.0820406612666123 0.0822713845399335 0.0836162973896627 0.083284573940762 0.086961015788474 0.0812730518578703 0.085311856256946 0.0892143266612353 0.0795255232275961 0.0836389713688763 0.0803136497776955 0.083846705725772 0.081389093272916 0.0830466884975673 0.082905915172891 0.087473352938888 0.0873994758085793 0.0807673786874104 5 5|0 +|/ 21129798 21130412 21130117.7 21128671 21130629 + gene protein_coding_gene TRUE TRUE AT5G51970.1|AT5G51970.2 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT5G63620.1); similar to sorbitol related enzyme [Solanum lycopersicum] (GB:BAE47038.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain GroES-related; (InterPro:IPR011597); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) -0.428476729558754 -4.90878955297033 0.000521166641982392 1 6.05870275699021 20.5637269922421 -0.428476729558754 0.0591829116578214 AT5G53000_at 8.34599393134278 8.40933039521527 9.01777719209738 9.17139563731508 9.41563159034144 9.0604342611843 7.58481766820804 7.75463266293919 6.86328112300914 6.5075710849705 8.30337185305466 8.6672229051395 8.2737184859072 8.35423234018825 8.33588984956333 8.12379338949987 8.176492396328 7.8856754657127 6.69807083418243 0.214675780532879 0.205838924155386 0.202814590648556 0.205013178861287 0.203144041185839 0.211538883924380 0.207170139655647 0.209245964451208 0.215629012621459 0.228908441749677 0.211071655799228 0.202927833776042 0.202814590648556 0.210904983404115 0.202814590648556 0.205660248065479 0.208036936312389 0.217941985093294 0.215352658467461 5 5|0 -|/ 21502903 21503466 21503267.1 21502681 21505217 - gene protein_coding_gene TRUE TRUE AT5G53000.1 TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD) PP2A-associated protein with a possible function in the chilling response Identical to PP2A regulatory subunit TAP46 (2A phosphatase-associated protein of 46 kDa) (TAP46) [Arabidopsis Thaliana] (GB:Q8LDQ4;GB:Q9LVV2;GB:Q9XHD0); similar to Os12g0137500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066109.1); similar to PP2A regulatory subunit-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72555.1); contains InterPro domain TAP42-like protein; (InterPro:IPR007304) 0.447750805576771 4.89631614767175 0.00053133000364932 1 6.04230110127928 16.0723469671945 0.447750805576771 0.0739517492713632 AT5G38650_at 9.17101973672161 9.2618912861799 10.1390367549612 10.3033763095011 10.1210168839712 10.1044938223139 8.67976129805378 8.9782424835029 8.13651451225067 8.7523707947389 10.0596753718398 9.7244151563679 9.79383770836424 9.86467124652941 9.51053165002944 9.79702695987282 9.42369031076616 9.34204436445494 8.64001507687989 0.118419360607792 0.114531269044137 0.117795160814325 0.114531269044137 0.114531269044137 0.121655860532058 0.117492958596533 0.117912265931783 0.159125747723688 0.119279857806496 0.116109565323390 0.115596573637738 0.115011064462859 0.121040706666790 0.121406281033620 0.115777562017329 0.127887311786164 0.146810932644656 0.123239502220928 5 5|0 -|/ 15488471 15489864 15489291.333 15488191 15490045 - gene protein_coding_gene TRUE TRUE AT5G38650.1 proteasome maturation factor UMP1 family protein similar to proteasome maturation factor UMP1 family protein [Arabidopsis thaliana] (TAIR:AT1G67250.1); similar to hypothetical protein [Picea mariana] (GB:AAC32110.1); contains InterPro domain Proteasome maturation factor UMP1; (InterPro:IPR008012) 0.429380995263553 4.89134650463153 0.000535437578443944 1 6.0357586506662 18.6944148505596 0.429380995263553 0.0610932370863228 AT5G44310_at 4.06230140155739 3.76021175728304 4.21392499537693 4.22399372557556 3.71854638544324 4.18187063662739 3.94296807866728 3.82969322053294 3.69598484190040 3.99272590899364 4.21924383121211 3.88602698118892 4.28247577993397 3.90430700250305 4.14149325511542 3.7965352755684 4.39642104075218 3.91037688521555 3.60260534036939 0.174668466027975 0.175314855418668 0.179587407880523 0.179055674515848 0.177988653275356 0.179305509382380 0.183589610730032 0.180371991557360 0.188039190664346 0.185080125372921 0.193627352706466 0.174668466027975 0.184548280192084 0.174668466027975 0.175747864401475 0.178154466598269 0.181405239025922 0.177261042716976 0.178662068866243 5 5 - 17865302 17865728 17865448.727 17865008 17866763 - gene protein_coding_gene TRUE TRUE AT5G44310.1|AT5G44310.2 late embryogenesis abundant domain-containing protein / LEA domain-containing protein similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21020.1); similar to Neuraxin/MAP1B repeat; Late embryogenesis abundant protein [Medicago truncatula] (GB:ABE88565.1); contains InterPro domain Synuclein; (InterPro:IPR001058); contains InterPro domain Late embryogenesis abundant protein; (InterPro:IPR004238)|similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21020.1); similar to Neuraxin/MAP1B repeat; Late embryogenesis abundant protein [Medicago truncatula] (GB:ABE88565.1); contains InterPro domain Late embryogenesis abundant protein; (InterPro:IPR004238) -0.48652504429984 -4.88852871104065 0.00053778150771427 1 6.03204712059611 7.90712979356164 -0.48652504429984 0.0977199843202698 AT5G58120_at 7.08004438195661 6.9085327480036 8.43844057317592 8.27291945208404 7.51190026166331 7.66288412493438 7.1917164704637 6.30321872585279 5.86832835130835 7.0650925505342 5.22076026248559 5.81845225338235 6.13727007385696 6.78112614201005 5.42625880967575 7.45591675470753 7.47410867115048 6.06041571144569 6.76643334416057 0.223987523306685 0.210977401841818 0.220505646357201 0.213821008603304 0.210977401841818 0.222244883807015 0.217342205565494 0.215071713431919 0.247943099259801 0.212989779090587 0.216455763348874 0.214689081648679 0.214948798556902 0.219061579985897 0.220130393750259 0.214009754389105 0.224553736150796 0.218069148681890 0.217631617803754 5 5 + 23537578 23537964 23537756.273 23534718 23538293 + gene protein_coding_gene TRUE TRUE AT5G58120.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63730.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63870.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G63750.3); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.620643062442156 -4.88621812728848 0.000539711632674469 1 6.02900262093411 13.8529104256870 -0.620643062442156 0.161325364247486 AT5G27395_at 4.56047819562067 4.33014691206887 4.69469781873453 5.04699733843729 4.79519397995221 4.38217226797234 4.82923179628405 4.41443794533502 3.11657472092368 3.61042124014296 3.83683040383274 3.65797274462163 2.98025268709684 3.55236934387121 3.6944427625177 3.64496475985363 3.9401750707108 4.03933449145176 3.52584082523292 0.240733561724439 0.243169932170714 0.241148964793352 0.241724212765283 0.237447466896945 0.231898478486975 0.228324109227072 0.236044936813014 0.234384469259442 0.23796547485503 0.251496452220232 0.230611935257379 0.228324109227072 0.242838386245053 0.229291802393849 0.233904869836579 0.240192355048659 0.234450319772884 0.239738838745111 5 0|5 /|- 9671865 9673316 9672503.75 9671525 9674259 - gene protein_coding_gene TRUE TRUE AT5G27395.1 protein translocase similar to Putative mitochondrial/chloroplast ribosomal protein L45 (ISS) [Ostreococcus tauri] (GB:CAL55110.1); similar to Os07g0647300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060468.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim44; (InterPro:IPR007379) -0.538857977851517 -4.88258760889371 0.000542759187404603 1 6.0242170142723 8.17462205434782 -0.538857977851517 0.124768491227766 AT5G14050_at 5.33537269453641 5.57688117140436 6.12510527945133 5.8106527371477 5.59864431275971 5.74642126735491 5.10142166748408 5.54658164144742 3.96754729135904 4.65792431580019 5.10099398059117 5.49213047788005 4.84076436269949 4.35926366419603 5.08352084324929 5.04562276263735 4.86963698392972 4.12544896733084 4.6082688670631 0.235544132090875 0.229505524553562 0.234359641135470 0.236180927771885 0.227501210356613 0.226201725174975 0.234332714763809 0.225875036133622 0.240433276802574 0.227191332396976 0.229838747036587 0.237615761135696 0.22555577546061 0.239248969132761 0.234440700492885 0.229590033590617 0.247147734988898 0.233388356978687 0.228990706134860 5 5 + 4534603 4535148 4534898.364 4533263 4535303 + gene protein_coding_gene TRUE TRUE AT5G14050.1 transducin family protein / WD-40 repeat family protein Identical to U3 small nucleolar RNA-associated protein 18 homolog [Arabidopsis Thaliana] (GB:Q9FMU5); similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G25150.1); similar to WD40-like [Medicago truncatula] (GB:ABD32295.1); similar to Inorganic pyrophosphatase; WD40-like [Medicago truncatula] (GB:ABE84702.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.501246532205838 -4.87644979618134 0.000547952954755013 1 6.01612105932246 10.2430948864757 -0.501246532205838 0.106286023667920 AT5G07200_at 1.45357425981384 1.38401775255408 2.29567877447718 2.28925496705134 2.48134448565406 2.77739194225926 1.47769593679046 1.39694961124685 2.38133332109682 1.9311014474611 3.09161275071559 1.40420317135893 2.26337206471382 2.52706747112749 1.67502176776575 1.8157626288674 1.78242531811787 2.1321683052881 1.53577598699343 0.212719818984596 0.212921013869904 0.215377454737355 0.211809002858574 0.211101036355494 0.2119334326297 0.210631543670964 0.213393331683745 0.212678019348409 0.208297295133888 0.211621487642637 0.209314215069314 0.208012733479287 0.216354975402359 0.208272445704339 0.208731923290166 0.211677310865964 0.208012733479287 0.211920243411982 5 5|0 -|/ 2243926 2244477 2244291.9 2243554 2245340 - gene protein_coding_gene TRUE TRUE AT5G07200.1 YAP169 (Gibberellin 20 oxidase 3); gibberellin 20-oxidase encodes a gibberellin 20-oxidase. Identical to Gibberellin 20 oxidase 3 (EC 1.14.11.-) (Gibberellin C-20 oxidase 3) (GA 20-oxidase 3) (20ox3) [Arabidopsis Thaliana] (GB:Q39112); similar to ATGA20OX4 (GIBBERELLIN 20-OXIDASE 4), gibberellin 20-oxidase [Arabidopsis thaliana] (TAIR:AT1G60980.1); similar to (GB:CAB96202.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.419241708783748 4.86821863440585 0.00055500085803501 1 6.00525340300088 3.96241735119496 0.419241708783748 0.0544623231897686 AT5G40970_at 1.92243936180755 2.82093488678968 3.62962198381176 3.17421423836476 4.73919416744493 4.12477409017555 2.97365000531559 3.25978485460635 3.38021229196812 2.99276893873542 5.036957547321 4.76287794200903 4.61969411856124 4.86456725635969 4.24028126939298 4.72733997688525 4.43426106433626 4.65095314862152 2.92951499393211 0.219661089124382 0.219943058109255 0.217711038989341 0.224303918855249 0.218204649170918 0.226777602517296 0.239408533538479 0.221408694115455 0.220405730266311 0.217711038989341 0.223841543727308 0.221224188072611 0.219959910735011 0.218151358501362 0.222687697970333 0.217711038989341 0.220617813456253 0.221514175980153 0.221539901648340 5 5 + 16431323 16431410 16431365.636 16431266 16431732 + gene protein_coding_gene TRUE TRUE AT5G40970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27030.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92576.1); similar to Os04g0387900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052629.1); similar to Os02g0509500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046927.1) 0.737225216813384 4.86283024361038 0.000559666586912254 1 5.99813255589944 7.21455100619673 0.737225216813384 0.2101082897449 AT5G08070_at 2.74234725131123 2.69955969297274 3.60665927988675 4.09054778274032 4.49315700745564 3.97973690414615 3.73458991934791 3.5657143756355 2.31123727310523 2.08816826356369 2.87324657985548 3.31456494752224 3.34890968759568 3.26038484783493 2.35982870629684 3.75488477435202 4.15340045108054 3.32949255290104 1.93548397686662 0.247586936380487 0.248480045564777 0.25911116982421 0.25643328933516 0.253832471974683 0.256440179541194 0.251667063071015 0.247586936380487 0.257590758836423 0.248347677156511 0.255725370213054 0.247762430146183 0.247586936380487 0.251859761702019 0.266111402908492 0.252012099386786 0.263029995425394 0.247892278002951 0.250575802971736 5 5 + 2585053 2585550 2585374.818 2584886 2585614 + gene protein_coding_gene TRUE TRUE AT5G08070.1 TCP17 (TCP domain protein 17); transcription factor similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G60970.1); similar to putative transcription factor [Solanum tuberosum] (GB:CAD91129.1); similar to Os05g0513100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056024.1); similar to Os01g0763200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044333.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) 0.538724000088194 4.86267515780003 0.00055980148672034 1 5.99792753109841 6.31952347982454 0.538724000088194 0.125759433832917 AT5G25240_at 4.22249294633899 3.93123355587441 4.93064929935918 5.07723025770858 4.95205014391716 4.79591679930676 4.77191445458597 4.80570359246173 5.25283853482838 4.38499739308213 5.98155684699468 4.92474610649647 5.74893003584934 6.0435358056554 4.54565213814685 4.91701669861721 5.57094679351093 4.78781641368457 4.93101709807878 0.218146340768022 0.210581202007121 0.213812794458077 0.214250795450280 0.208186686251193 0.21515725862607 0.220471588079472 0.212135602001099 0.210558251371257 0.209841245696191 0.219042812282193 0.209485703464236 0.209578896202206 0.218695238569005 0.215118044830489 0.212663912306341 0.220241270712718 0.217415665682003 0.211589283567913 5 5 - 8746784 8747136 8746957.636 8746608 8747200 - gene protein_coding_gene TRUE TRUE AT5G25240.1 similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G14890.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80961.1) -0.429002955205871 -4.86136647977793 0.00056094119879277 1 5.996197277186 9.77155360462702 -0.429002955205871 0.062835130163718 AT5G14270_at 7.84349206392262 7.83462860331 8.67042694866062 8.61800552789005 9.06448220670531 8.88583755370847 6.7576019589132 6.98323138682089 7.43869822379304 6.53457326544856 8.47074091144148 8.19077165692655 7.90667028841931 8.25788131915862 8.01690113469091 8.0438561473075 8.25983644832225 8.0883487166624 6.6992549384153 0.183958424543817 0.174897513111542 0.176656463271055 0.176306676122258 0.181661845453837 0.179334683936450 0.174483669885802 0.18625753559449 0.177091006882905 0.193149996027987 0.178113623890156 0.177505669359623 0.177296333576117 0.180682424068940 0.179000872187323 0.177436654098096 0.179419491192131 0.186945724099001 0.191264516209139 5 5|0 +|/ 4607645 4608473 4608266.3 4604735 4608908 + gene protein_coding_gene TRUE TRUE AT5G14270.1 ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9); DNA binding similar to ATBET10 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10), DNA binding [Arabidopsis thaliana] (TAIR:AT3G01770.1); similar to putative bromodomain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08859.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.414051465740898 4.8578716141983 0.000563996892454355 1 5.99157508955011 15.6048222664506 0.414051465740898 0.0506459536453246 AT5G51210_at 2.66173499048615 2.42824433340944 2.36238726828528 1.9592698040267 2.18502595278444 2.29605419548596 2.16022859886069 2.54680280868480 2.74472510172915 2.43340916269104 2.64076038435032 1.96860694969917 2.521672577574 2.19542708893439 2.41142116112206 2.39976989918092 2.39305775974113 2.44025986528678 2.65449664759464 0.190266449448643 0.185960493492879 0.185773066911489 0.182879493510686 0.188086047466454 0.185782622453132 0.186092674300040 0.182879493510686 0.195177316729137 0.185569116640723 0.188241045719488 0.187366286253675 0.194987827394133 0.196033006379146 0.185015809913021 0.183182537247712 0.192739275747701 0.190236226007503 0.199578747252598 5 5|0 +|/ 20837426 20837891 20837609.8 20837327 20838170 + gene protein_coding_gene TRUE TRUE AT5G51210.1 OLEO3 (OLEOSIN3) Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. Identical to Oleosin 14.9 kDa (OL3) [Arabidopsis Thaliana] (GB:Q43284); similar to OLEO1 (OLEOSIN1) [Arabidopsis thaliana] (TAIR:AT4G25140.1); similar to oleosin (GB:1803528A); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.499691162185925 -4.85721780053925 0.000564570500765827 1 5.99071013756404 4.81609295970679 -0.499691162185925 0.106507865687569 AT5G64860_at 7.97510143486257 7.7730139743285 8.22072232919386 8.05122723386609 8.88633097123792 8.49505963027175 6.86394284697161 6.62685324268197 6.63218405232996 7.22582492566293 8.59815929623049 8.56269225604954 8.43257941051448 8.40631084617289 8.67932128503698 8.31482469124322 8.31253179807907 8.81282705727249 6.45684031911544 0.121042320403069 0.122120579846177 0.125066858597625 0.122549178064369 0.122027524112320 0.126245877255321 0.127264680202205 0.129681537239576 0.143646478926910 0.123634782386595 0.12290805997169 0.118440395160329 0.117029985437669 0.123542639288331 0.125451042043808 0.117029985437669 0.117235421793032 0.121673131228996 0.129269057643985 5 0|5 /|- 25942662 25943379 25943052.333 25942399 25946074 - gene protein_coding_gene TRUE TRUE AT5G64860.1 DPE1 (DISPROPORTIONATING ENZYME); 4-alpha-glucanotransferase Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation. similar to DPE2 (DISPROPORTIONATING ENZYME 2), 4-alpha-glucanotransferase/ heteroglycan binding [Arabidopsis thaliana] (TAIR:AT2G40840.1); similar to 4-alpha-glucanotransferase, chloroplast precursor (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (GB:Q06801); similar to Glycoside hydrolase, family 77 [Medicago truncatula] (GB:ABE89412.1); similar to Chain A, Structure Determination And Refinement At 1.8 A Resolution Of Disproportionating Enzyme From Potato (GB:1X1N); contains InterPro domain Glycoside hydrolase, family 77; (InterPro:IPR003385) 0.472223430141057 4.85712687076761 0.000564650324808309 1 5.99058983751306 15.5047925891489 0.472223430141057 0.0913873926466201 AT5G47210_at 9.69078299752261 9.79744203962881 9.94373915677622 9.8990068865514 9.90494443296208 9.84241798126416 9.66045221160288 10.0262723614818 9.5430965050939 9.88577590985917 10.1150145563309 10.3141800875783 10.1112582699849 9.9885063911339 10.3847222440331 10.0830569460301 10.0463796088889 9.78689317690369 9.73563227212317 0.0716266433265389 0.0705892709933531 0.0739064777406407 0.076322912760316 0.0721710905125864 0.07358451599491 0.0749398042990453 0.0761117883285268 0.0824246765096423 0.0762054430822936 0.0771372289714171 0.0705892709933531 0.073721570153755 0.0783474551821143 0.0751098966644738 0.0711382786548763 0.0763239256950934 0.073069276926406 0.0771015906815741 5 5|0 -|/ 19186460 19187351 19186804.222 19186249 19188490 - gene protein_coding_gene TRUE TRUE AT5G47210.1|AT5G47210.2|AT5G47210.3 nuclear RNA-binding protein, putative similar to nuclear RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G17520.1); similar to nuclear RNA binding protein, putative [Brassica oleracea] (GB:ABD64914.1); contains InterPro domain Hyaluronan/mRNA binding protein; (InterPro:IPR006861)|similar to nuclear RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G17520.1); similar to nuclear RNA binding protein, putative [Brassica oleracea] (GB:ABD65067.1); contains InterPro domain Hyaluronan/mRNA binding protein; (InterPro:IPR006861) -0.434358659973922 -4.85451432871305 0.000566948894210209 1 5.98713281858184 19.7582587447084 -0.434358659973922 0.0672715513899379 AT5G05790_at 4.22586741256945 4.6656565017791 3.54245502242223 3.80219328721059 3.85493292020318 3.52939388863622 3.64649371176778 3.63873779911521 2.74849637107144 2.69653309625031 3.09200710504392 3.98208580928168 2.91001245802284 2.99906307772974 3.43767799936070 3.88560580731168 2.47019601493229 3.02217592840170 2.71009659897024 0.217922805870795 0.225689111099469 0.224330988654314 0.225274084388426 0.219980485330328 0.217115701915805 0.225522446525348 0.221789976923086 0.230179256766545 0.218742130881242 0.217393447243955 0.229585592327950 0.216804208925040 0.220381285951416 0.229732619868864 0.219039554942033 0.218005950704524 0.219156335845766 0.216804208925040 5 5 - 1740787 1741402 1741067.636 1740573 1742029 - gene protein_coding_gene TRUE TRUE AT5G05790.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G11280.2); similar to putative MYB transcription factor [Cucumis sativus] (GB:CAI30890.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.495853892504373 -4.85082470856075 0.000570211987278243 1 5.98224850394972 6.83483050818359 -0.495853892504373 0.10482517167778 AT5G59410_at 5.66978987958541 6.3131403731338 7.27695249461996 7.24558372418578 7.63227522782144 7.5359866184571 5.45162670454376 5.88966647484506 5.46588507872271 5.69710931147974 6.98241189188089 7.73293378965471 7.52613485136806 7.00497944917195 6.82355508054367 7.12302157620171 7.05970883404585 7.09714356869972 5.48824387665084 0.218651984661569 0.216855061330449 0.21954358689417 0.221200152363791 0.222055275809642 0.220391420411961 0.223653020590219 0.217319682464585 0.240421498576886 0.221724844003225 0.216248313806553 0.220976884205583 0.216248313806553 0.227660933690592 0.216462364428747 0.216248313806553 0.231387370455519 0.216248313806553 0.225624673189881 5 5|0 -|/ 23976995 23977886 23977452.222 23976799 23978104 - gene protein_coding_gene TRUE TRUE AT5G59410.1 similar to Rab5-interacting family protein [Arabidopsis thaliana] (TAIR:AT2G29020.1); similar to Os05g0110600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054441.1); similar to hypothetical protein [Oryza sativa] (GB:AAK73154.1); contains InterPro domain Rab5-interacting; (InterPro:IPR010742) 0.558652412989147 4.84970184983921 0.000571208982774752 1 5.98076158553037 12.9864521300558 0.558652412989147 0.135826877696294 AT5G62580_at 3.94735145397241 3.64501045245276 3.52769215946619 3.48321386199693 3.09669603357550 3.23050609981477 4.02762772962782 4.3112579434115 3.8234691401888 4.40146658965387 5.97508890333063 6.84558593316302 5.28592272338709 5.66745590417332 6.53463617216031 5.29402890318088 4.27670810272188 5.08603787531116 4.52570738718389 0.248668438548745 0.235506956239814 0.250409061132408 0.249930130408465 0.251212225138966 0.272446353209029 0.244234940232556 0.243782877177442 0.24265215323982 0.236705066515251 0.251129166458900 0.247402562154239 0.235506956239814 0.249488988213841 0.247934719397159 0.237035871347557 0.253183384630114 0.236246286838589 0.235939019067204 5 5 + 25138678 25139244 25139007 25137089 25139752 + gene protein_coding_gene TRUE TRUE AT5G62580.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT1G27210.1); similar to Os02g0739900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048070.1); similar to Os06g0244700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057275.1); similar to putative potyviral helper component protease-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD45803.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.446137619762682 -4.84880916573516 0.000572002920976149 1 5.97957931065848 8.5941181853001 -0.446137619762682 0.0757773219712476 AT5G36940_at 7.12759390791796 7.12026136569752 8.00175626653514 7.83861222970445 8.61829128140976 8.05526711552085 8.11885771784596 7.73796758394563 8.04730757771248 7.67336439901235 8.20199828935418 7.77287958731818 8.44649770027568 8.57320192528481 7.50978694074921 8.27819211180653 7.97443979740694 8.07936417637405 7.97794872227715 0.186050015160165 0.1799152382834 0.191025217871693 0.181881381459897 0.193671637747107 0.193477434054147 0.182612239881756 0.184347582006132 0.184559104377814 0.182020942939282 0.177152781593384 0.179245594502838 0.186664646812786 0.181974997595526 0.180587780534101 0.184138142743136 0.194459016902728 0.185571127091168 0.180917836748442 5 5|0 +|/ 14610372 14611339 14610965.556 14607396 14611614 + gene protein_coding_gene TRUE TRUE AT5G36940.1 CAT3 (CATIONIC AMINO ACID TRANSPORTER 3); cationic amino acid transporter Arabidopsis thaliana amino acid permease family protein (At5g36940) similar to CAT4 (CATIONIC AMINO ACID TRANSPORTER 4), cationic amino acid transporter [Arabidopsis thaliana] (TAIR:AT3G03720.1); similar to CAT2 (CATIONIC AMINO ACID TRANSPORTER 2), amino acid transporter [Arabidopsis thaliana] (TAIR:AT1G58030.1); similar to Amino acid/polyamine transporter I [Medicago truncatula] (GB:ABD28534.1); similar to Amino acid permease-associated re (GB:ABE92408.1); similar to amino acid permease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99422.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) -0.526177438829674 -4.83805160765272 0.000581662901135453 1 5.9653208383373 15.8293685831081 -0.526177438829674 0.120982817270343 AT5G58700_at 2.67271665548976 2.50208264964471 2.85310366060635 3.49259487575215 3.42914670232636 3.46470771316262 2.47244962223230 2.65150127314421 2.10504127117480 2.61350319966849 3.34214095202349 3.87060220066895 2.90477142264609 3.37118215195426 3.57366597663042 3.2250245075289 3.57263700276585 3.55334744988419 2.22492127581951 0.214420979679524 0.204457987263868 0.20590720992311 0.205243121291471 0.200887427197101 0.212428211087806 0.203072885042313 0.202112849796073 0.206628097664955 0.215396570518726 0.201838523293252 0.207870507605749 0.203727396143296 0.211186012142525 0.206987513058653 0.201119492757632 0.204706315519773 0.205250674066166 0.206489639246758 5 5|0 -|/ 23730373 23731171 23730671.9 23730226 23733324 - gene protein_coding_gene TRUE TRUE AT5G58700.1|AT5G58700.2 phosphoinositide-specific phospholipase C family protein|phosphoinositide phospholipase C similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT5G58690.1); similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to ATPLC2 (PHOSPHOLIPASE C 2), phospholipase C [Arabidopsis thaliana] (TAIR:AT3G08510.2); similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] (GB:CAA65127.1); similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] (GB:CAA72681.1); similar to phospholipase C [Petunia inflata] (GB:ABC50164.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973)|similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to ATPLC2 (PHOSPHOLIPASE C 2), phospholipase C [Arabidopsis thaliana] (TAIR:AT3G08510.2); similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] (GB:CAA65127.1); similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] (GB:CAA72681.1); similar to phospholipase C [Petunia inflata] (GB:ABC50164.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.5212711498534 4.83324948439791 0.000586030676568968 1 5.95894930056337 5.81286791416166 0.5212711498534 0.118815488081963 AT5G65700_at 6.3033426552917 7.16247805886256 5.5655712402469 5.71072423787115 6.02415396535846 6.0637668749015 6.48125313650007 7.12876115770547 6.02992756190502 6.5430180941168 8.07096881239324 8.96116507478131 8.36750541753453 8.10983099610112 8.40269142287102 8.59477318338354 7.12698175869021 7.62417652915962 6.93605752696851 0.252625207863188 0.239347546683854 0.248642494298351 0.248858075962496 0.241456667045029 0.253702764438680 0.248528024187012 0.240889615511908 0.258057272748722 0.245250266986643 0.242880530733341 0.243704272264936 0.243176798480694 0.239347546683854 0.246155326127204 0.239347546683854 0.248938544398977 0.239347546683854 0.239387483288733 5 5 + 26301467 26302129 26301809.273 26298983 26302473 + gene protein_coding_gene TRUE TRUE AT5G65700.1 BAM1 (big apical meristem 1); ATP binding / kinase/ protein serine/threonine kinase Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. similar to BAM2 (big apical meristem 2), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT3G49670.1); similar to CLV1 (CLAVATA 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G75820.1); similar to BAM3 (big apical meristem 3), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G20270.1); similar to receptor-like protein kinase 2 [Glycine max] (GB:AAF91323.1); similar to receptor-like protein kinase 1 [Glycine max] (GB:AAF91322.1); similar to receptor-like protein kinase 3 [Glycine max] (GB:AAF91324.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.677211101908009 -4.83049380554319 0.000588552769976838 1 5.95529117449189 13.6351377710228 -0.677211101908009 0.187986984443445 AT5G60970_at 3.48928183923863 3.47179476397786 3.32172291114953 3.11306796378403 4.29871876485498 4.35446546599135 4.34248775096354 4.48505848122549 3.32216131487178 3.56825352847414 4.39449924134884 4.28927996159429 4.30817782817668 4.80233348963494 3.58049022385390 4.57524476067098 4.28880378700013 4.46539854831580 3.72504196106253 0.222234115795314 0.222896859186664 0.224282856131871 0.227072453382186 0.228927070010089 0.22218605063162 0.219316994059129 0.221308182093835 0.227623761086788 0.242502380971207 0.217077716680674 0.220364218958267 0.218541673141308 0.22960476875537 0.220562625794105 0.225309457418920 0.224617860689927 0.227588559757481 0.222689986665669 5 5 - 24552896 24553322 24553088.727 24552796 24554273 - gene protein_coding_gene TRUE TRUE AT5G60970.1 TCP family transcription factor, putative similar to TCP17 (TCP domain protein 17), transcription factor [Arabidopsis thaliana] (TAIR:AT5G08070.1); similar to TCP family transcription factor [Dendrobium hybrid cultivar] (GB:ABF61889.1); similar to Os05g0513100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056024.1); similar to Os01g0763200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044333.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) -0.405532877671456 -4.82754024647533 0.00059126872905751 1 5.95136887169165 7.79783178342014 -0.405532877671456 0.0448865211468883 AT5G57120_at 5.45445579393974 5.77806200401734 5.78185877382038 5.70953144087759 5.80633076244661 5.87067076337141 4.94184010598626 4.6139147183697 5.721375493133 5.24274163032473 6.20859980254098 6.27798956892968 5.82586283572577 6.12279457997542 6.31106953867149 6.24919080325648 5.93275051602983 5.89721332015716 5.84572851496357 0.173361405742044 0.163934884218217 0.166589461106087 0.164671642625686 0.169444417207493 0.178028161098440 0.180010149032710 0.177701364624821 0.167677907007540 0.169752116613871 0.167820868641749 0.172364962417688 0.173811405436150 0.164389100593148 0.162229877613618 0.175652280422889 0.162322729627333 0.170652113617660 0.166035987169667 5 5|0 -|/ 23140023 23140852 23140399.375 23139766 23141739 - gene protein_coding_gene TRUE TRUE AT5G57120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60030.1); similar to BRI1-KD interacting protein 132 [Oryza sativa (japonica cultivar-group)] (GB:BAD11359.1); similar to Os12g0613500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067264.1); contains InterPro domain SRP40, C-terminal; (InterPro:IPR007718); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) -0.452932655887047 -4.82713734144637 0.000591640249095055 1 5.95083369728831 11.3478159204209 -0.452932655887047 0.0814694081663681 AT5G63480_at 4.86145173570377 5.10375570154735 5.24843550953589 4.66635266131355 6.57120028839351 6.19555629094125 5.30268779816866 5.17137381890424 5.94307959513013 5.13031055618304 6.03732888834118 5.97227600772445 5.98091079626973 5.93796292079862 5.08481674784805 5.42458394784281 5.72344835188574 5.37817232361749 5.05507749689644 0.267623134858878 0.263341910913802 0.271014819060535 0.273538352235998 0.263179327192854 0.263832126647595 0.265012857894510 0.271815697704214 0.269903655993753 0.270304819838202 0.268953414021179 0.26110210711207 0.267883648651683 0.266868727346894 0.270254128244708 0.26110210711207 0.296290560598809 0.272992388741901 0.270107107435729 5 5 + 25434551 25435673 25434873 25434491 25435861 + gene protein_coding_gene TRUE TRUE AT5G63480.1 similar to OSJNBa0053B21.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05534.2); similar to OSIGBa0096P03.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66428.1); contains InterPro domain Apolipophorin III-like; (InterPro:IPR011000) -0.541557093486961 -4.82678468524966 0.000591965637271696 1 5.95036524427466 10.9243984159523 -0.541557093486961 0.129025387343085 AT5G50240_at 5.6604382948995 5.29357321567329 6.87018965417924 6.23793720843368 6.18931635843616 6.48996099660736 6.86461787093687 6.73899902071512 5.63189233451787 5.9169527070278 5.34362582781286 5.87403203053892 6.15843292048283 6.59946084478999 6.18170841806449 6.91751688889599 6.61790152678111 6.73017333178815 5.41848149685992 0.23852119055394 0.238572552797560 0.231495357138545 0.254307915595223 0.259521074379071 0.23742384818459 0.257351776614916 0.235712881871111 0.246400224618132 0.237520980467396 0.238215332206666 0.231495357138545 0.233040640173854 0.241239268539507 0.238145041391282 0.231495357138545 0.252396447680090 0.231495357138545 0.232117879743772 5 5|0 +|/ 20468870 20469521 20469278.167 20468454 20469795 + gene protein_coding_gene TRUE TRUE AT5G50240.1|AT5G50240.2 PIMT2 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2); protein-L-isoaspartate (D-aspartate) O-methyltransferase|PIMT2 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2) L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced. similar to PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1), protein-L-isoaspartate (D-aspartate) O-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G48330.2); similar to Protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) (GB:Q43209); similar to Os08g0557000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062480.1); similar to OSJNBb0011N17.10 [Oryza sativa (japonica cultivar-group)] (GB:CAD41093.2); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Protein-L-isoaspartate(D-aspartate) O-methyltransferase; (InterPro:IPR000682) -0.560988265112218 -4.81993212328953 0.000598326081806001 1 5.94125823103286 12.2724450707082 -0.560988265112218 0.138497847157595 AT5G23690_at 2.40534947253608 3.06569402676925 3.42406731757634 3.40354915335819 3.24218781566202 3.12438551186102 3.83737048638044 3.63636080382208 2.91645486510644 2.61533610723285 2.54940183434928 2.72083342247053 2.96568429415049 2.82789549224942 2.58437840505123 3.07600808698287 2.98967087336157 2.87339385228878 3.48749503606582 0.212476660927743 0.207474436685805 0.212785313908796 0.209608996327015 0.206225050409233 0.220689986834788 0.20675251170072 0.209714210572655 0.208779611403225 0.204073069518689 0.20835929933652 0.213257224553171 0.212881594568386 0.208006011208951 0.206412537020752 0.206161591520227 0.223714699645543 0.210737838701996 0.204073069518689 5 0|5 /|+ 7989728 7990421 7990015.1 7987543 7990550 + gene protein_coding_gene TRUE TRUE AT5G23690.1 polynucleotide adenylyltransferase family protein similar to polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G48830.1); similar to Os03g0131400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048863.1); similar to Putative poly(A) polymerase [Oryza sativa (japonica cultivar-group)] (GB:AAM22707.1); similar to Os04g0395900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052662.1); contains InterPro domain Nucleotidyltransferase/Poly(A) polymerase; (InterPro:IPR012277); contains InterPro domain Polynucleotide adenylyltransferase region; (InterPro:IPR002646) -0.523169572991316 -4.80576312114743 0.000611708002918148 1 5.92240136299808 6.18228904953637 -0.523169572991316 0.121231949980151 AT5G10980_at 11.5130172760433 11.5301837102154 12.4028298572115 12.3139794570822 12.6406057541964 12.4750839508930 11.4772393881669 11.3542873034534 11.5794981354049 11.0761183554918 12.1053446162671 12.2612953308661 11.9560660429978 12.1534532280364 12.0909806954921 12.1307720122265 11.8876400776305 12.0314467933426 11.0609350353877 0.0759649623236044 0.076580325368 0.0751298349986421 0.0772599163058621 0.0773457934201687 0.0827963715226192 0.0737904038352522 0.0748790909579487 0.076464213844785 0.0760630618512175 0.0746334767073859 0.0737371664197157 0.0748983434016338 0.0770210222778249 0.0761739232372285 0.0742922861523896 0.0779771035475281 0.0764527147726918 0.0767842145106532 5 5|0 -|/ 3472625 3473284 3472783.1 3472406 3473467 - gene protein_coding_gene TRUE TRUE AT5G10980.1 histone H3 Identical to Histone H3.3 (HTR8) [Arabidopsis Thaliana] (GB:P59169;GB:Q6NR95); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40030.3); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to disease-resistent-related protein [Oryza sativa] (GB:AAL78367.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.398060225690805 4.80286706815342 0.00061448195222175 1 5.91854277129776 23.6213910163422 0.398060225690805 0.0389675769854666 AT5G07290_at 6.6825794469639 6.64865731198243 7.7063350989078 8.11880114553381 7.78072884224458 7.61798917812653 6.22382058151544 6.5890570529246 5.92003443943895 6.09132048852062 7.86210006919214 7.95650292982786 7.64511859314515 7.71538203152752 7.71578241872247 8.11769251615148 8.22311677330505 6.87776096511256 6.01889173631265 0.200740717015071 0.197223227736988 0.204003920781548 0.197622682329868 0.195714597662937 0.194901259420062 0.197132093701709 0.200088458358803 0.206307326957461 0.195843211890817 0.198272358630767 0.195825442361919 0.196516726422781 0.201841090025974 0.20554141807479 0.193853187060428 0.197948054757378 0.200177601014933 0.202553045666689 5 5 + 2297609 2298462 2298083.727 2293372 2298977 + gene protein_coding_gene TRUE TRUE AT5G07290.1 (ARABIDOPSIS MEI2-LIKE); RNA binding AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices. similar to AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1), RNA binding [Arabidopsis thaliana] (TAIR:AT5G61960.2); similar to AML1 [Lycopersicon esculentum] (GB:AAT39005.1); similar to putative AML1 [Oryza sativa (japonica cultivar-group)] (GB:BAD46727.1); similar to Mei2-like protein [Hordeum vulgare subsp. vulgare] (GB:AAL85701.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA recognition motif 2; (InterPro:IPR007201); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.481062608866219 4.80001684742701 0.000617224998319004 1 5.91474379775875 14.0581282115484 0.481062608866219 0.0995870318651795 AT5G44500_at 4.21534111521517 3.79616063108864 4.74308385506097 4.64218868741586 4.3280769746066 4.41858587295031 4.32847914533283 4.28754833218873 3.75506049846747 3.76374869013801 4.14994053217461 4.00482452402729 3.7731219177717 3.5353108390015 4.39891216134814 4.16155051562579 3.90714217085048 4.09372435059462 3.67105995946709 0.193994493551149 0.189033295174524 0.198506730781678 0.186770643396936 0.187244185509961 0.195415826102205 0.188145365199111 0.191209589198743 0.197194307703852 0.187452557123690 0.189560516744440 0.191130659757071 0.186902435869374 0.186770643396936 0.192979670891171 0.187273052964083 0.19306603256339 0.193618136122145 0.194262264307424 5 5 + 17944975 17945464 17945163.727 17944670 17946690 + gene protein_coding_gene TRUE TRUE AT5G44500.1|AT5G44500.2 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative similar to SMB [Arabidopsis thaliana] (TAIR:AT4G20440.3); similar to small nuclear ribonucleoprotein polypeptide B/B' isoform B' [Homo sapiens] (GB:NP_937859.1); similar to Small nuclear ribonucleoprotein-associated protein B' (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') (GB:Q9TU67); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649) -0.441822805803772 -4.78905913254672 0.000627891907662607 1 5.90012522806557 8.21144420628995 -0.441822805803772 0.0765675085200774 AT5G38220_at 7.59328162737954 7.77488624557254 8.65058247030718 8.65060152114369 9.4211770788325 8.83066352709935 7.84303569511249 8.1077336917 6.17270063395634 6.51981287743973 8.21492622763407 8.6327630938553 8.21693202843374 8.07493172620017 8.12623830589922 8.49641768144213 8.05964953083394 7.8711102265063 6.39719901433223 0.190844549206762 0.168318072613558 0.174132873588643 0.175157857644267 0.177633523439197 0.182429753894049 0.173243478441181 0.168318072613558 0.189639242753345 0.178556406849279 0.172776202860050 0.168318072613558 0.170551541379406 0.175907880864007 0.173292512867372 0.170933456434955 0.177335676822723 0.170789549833271 0.184037252327486 5 5 + 15287411 15288237 15287884.091 15286057 15288616 + gene protein_coding_gene TRUE TRUE AT5G38220.1|AT5G38220.2|AT5G38220.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66900.1); similar to Os01g0689800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043924.1); similar to C (GB:BAD82560.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Phospholipase/Carboxylesterase; (InterPro:IPR003140)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66900.1); similar to Os01g0689800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043924.1); similar to C (GB:BAD82560.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.510932895294507 4.78332670709549 0.00063354972829997 1 5.89246921744168 15.6464245377318 0.510932895294507 0.116314302351854 AT5G19310_at 3.71414761486829 4.20594088895942 5.86989471646894 5.06020272103453 6.94966864520956 6.41981717029568 3.68958863471981 3.72395005052584 5.30693039946121 5.32266550099106 6.84857408262005 7.1044800894925 5.87048640251538 6.17243593570279 6.34276034149049 6.59656308640958 6.02328119985883 5.81923707979446 5.27842452591196 0.270513025215588 0.283177218069865 0.283765102769417 0.271718570105845 0.270513025215588 0.270513025215588 0.277150477301182 0.272363155532177 0.270513025215588 0.278031015704177 0.272870587131916 0.270513025215588 0.270513025215588 0.270513025215588 0.271463811447962 0.270513025215588 0.271261965831774 0.289343622631505 0.287382736528069 5 5 + 6502878 6503375 6503078.091 6498781 6503434 + gene protein_coding_gene TRUE TRUE AT5G19310.1 homeotic gene regulator, putative similar to homeotic gene regulator, putative [Arabidopsis thaliana] (TAIR:AT3G06010.1); similar to PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 10 [Canis familiaris] (GB:XP_859981.1); similar to PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 17 [Canis familiaris] (GB:XP_867807.1); similar to PREDICTED: similar to CG5942-PA, isoform A [Tribolium castaneum] (GB:XP_967398.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.670300162257517 4.78207163664559 0.000634795644839138 1 5.8907922193156 10.7791016816054 0.670300162257517 0.187936491996376 AT5G45400_at 1.47333157254707 1.03193114042971 2.04457992600564 1.58955574503856 1.88900073682811 1.77957444805578 1.49555400077105 1.32285279181963 1.31876217350384 1.27714503533289 2.04541354621487 2.28526610957543 1.96159877797693 2.10710826812810 2.03777631764029 1.83507449055711 1.76146036957019 1.66311478382863 1.04526796248390 0.190381517443489 0.192113924386645 0.193869086373376 0.187933923024082 0.189706207918193 0.187453665838407 0.187049529060263 0.191571978578746 0.189002518005887 0.198910604529732 0.188462398482424 0.187377311165052 0.19254351405302 0.193849087280556 0.186611052262425 0.194269215799386 0.188992150771382 0.191785667380805 0.200633409108284 5 5 + 18418367 18418781 18418591 18416217 18418871 + gene protein_coding_gene TRUE TRUE AT5G45400.1 replication protein, putative similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT4G19130.1); similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT2G06510.1); similar to Os05g0111000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054445.1); similar to RPA 70kDa subunit [Pisum sativum] (GB:AAQ23194.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.508296229453813 4.77781148678907 0.00063904408541757 1 5.88509782717693 3.16621086520860 0.508296229453813 0.115270666760732 AT5G56710_at 10.5966379869135 10.6589653302122 10.5693536953330 10.8070723785154 10.7822612094200 10.6833538617638 10.5389553105065 10.8128839163634 10.6225890125457 10.7472396597503 11.0880409223838 11.3922959085941 11.0458902942323 10.8843196044488 11.3208978442547 10.7999851314703 10.6339909876059 10.7458463463156 10.7284109676595 0.0658785250010476 0.0672588294212958 0.0658312623233935 0.0645116107940012 0.0674222633110412 0.0658179105985654 0.0660502294855174 0.0639668496552776 0.0697450547420078 0.0666555528659169 0.0681912086472062 0.0639668496552776 0.0639668496552776 0.066408226755215 0.0657606646729154 0.0639668496552776 0.0676400271472978 0.0696215449428467 0.0656457789312748 5 5|0 -|/ 22961242 22961930 22961405.6 22961062 22962196 - gene protein_coding_gene TRUE TRUE AT5G56710.1|AT5G56710.2 60S ribosomal protein L31 (RPL31C) Identical to 60S ribosomal protein L31-3 (RPL31C) [Arabidopsis Thaliana] (GB:P51420;GB:Q8LEJ0;GB:Q9FJU1); similar to 60S ribosomal protein L31 (RPL31B) [Arabidopsis thaliana] (TAIR:AT4G26230.1); similar to 60S ribosomal protein L31 (GB:P46290); contains InterPro domain Ribosomal protein L31e; (InterPro:IPR000054) -0.425457362300898 -4.77498151798066 0.000641882890810656 1 5.8813133390264 21.5253462577443 -0.425457362300898 0.0659459565610489 AT5G18570_at 6.0378105613036 6.37412923674029 6.09988568379616 6.70541839798206 6.93490713539396 6.45740026061889 6.47928386506797 6.4583345020321 5.64488706204694 6.2318705065471 6.37739571915475 6.83634823534303 6.6394260615676 6.7019960281463 7.59260033997689 7.06329932711785 6.85006002469608 6.3074203891431 6.2944773765707 0.243662188415002 0.236098964216246 0.252312934345212 0.236098964216246 0.251087221300194 0.244806762759207 0.241391414991423 0.238407119822548 0.248030172494735 0.238854889647015 0.240790120006912 0.241572184165308 0.241754355444336 0.247609387626444 0.245853537537914 0.243708259335607 0.245651218969329 0.241660822809672 0.236098964216246 5 5 - 6171737 6172639 6172279.778 6171663 6174835 - gene protein_coding_gene TRUE TRUE AT5G18570.1 GTP1/OBG family protein similar to GTP binding [Arabidopsis thaliana] (TAIR:AT1G07615.1); similar to putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83597.1); similar to Os07g0669200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060586.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP1/OBG; (InterPro:IPR006073); contains InterPro domain GTP1/OBG subdomain; (InterPro:IPR006169) -0.570707014846734 -4.77027723894041 0.000646631408837884 1 5.87501923218984 12.8699694957159 -0.570707014846734 0.145636764748825 AT5G62190_at 9.5704276226169 9.6271267893513 9.83265556003834 9.73575876175375 10.1383800663826 10.0869498053665 9.04864775001205 9.19587110914796 9.02201558161232 8.95183976201667 9.02090500269452 9.1476592783866 9.34623412970895 9.03646975778925 9.1402339569893 9.02359556085543 9.40524409695057 9.05419140026411 9.19862771784143 0.110184998520587 0.106264157792804 0.105892085486828 0.115276416588649 0.109535789719287 0.110794149166663 0.108491390066838 0.108874963956176 0.130123638649870 0.116170565712327 0.112782598675748 0.107603615847105 0.110372240471943 0.112816442163826 0.108054930905625 0.109790165771397 0.112932459758616 0.114198211607569 0.113146581881237 5 5|0 -|/ 24997815 24998601 24998270.875 24997494 25001199 - gene protein_coding_gene TRUE TRUE AT5G62190.1 PRH75 (plant RNA helicase 75); ATP-dependent helicase DEAD/DEAH box RNA helicase PRH75 Identical to DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) (RH7) [Arabidopsis Thaliana] (GB:Q39189;GB:Q94BX7;GB:Q9LVB7); similar to EMB1138 (EMBRYO DEFECTIVE 1138), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT5G26742.2); similar to RNA helicase [Vigna radiata] (GB:AAF40306.1); similar to DEAD-box ATP-dependent RNA helicase 7 (GB:Q41382); similar to Helicase, C-terminal [Medicago truncatula] (GB:ABE79355.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain GUCT; (InterPro:IPR012562); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) -0.390651419474623 -4.76793153870968 0.000649013034352186 1 5.87187933762861 18.7566326839728 -0.390651419474623 0.0332533325347015 AT5G10430_at 2.45537214225369 3.00820774693931 2.00399035614798 2.06146980255875 2.47740277346526 2.42029564811574 1.84570765997006 2.29523916293406 2.60382704132966 2.60453638144033 5.00086761744531 5.63526235500278 5.27706904945922 4.82822391895085 4.89337033440277 4.65647283985591 4.31624225103442 3.94826771580337 2.93393330665471 0.246419181403487 0.245892982724204 0.254417049559406 0.244274727735456 0.247784149760389 0.244274727735456 0.253029643424915 0.244274727735456 0.260958898041146 0.248811369247711 0.248101587024203 0.254735799489160 0.249742199819418 0.247901887173804 0.247461840946160 0.244274727735456 0.244474286610600 0.263587604320755 0.244274727735456 5 5 - 3277832 3278209 3278012.091 3277533 3278314 - gene protein_coding_gene TRUE TRUE AT5G10430.1 AGP4 (ARABINOGALACTAN-PROTEIN 4) Encodes arabinogalactan-protein (AGP4). Identical to Classical arabinogalactan protein 4 precursor (AGP4) [Arabidopsis Thaliana] (GB:Q9ZT16); similar to AGP7 (Arabinogalactan protein 7) [Arabidopsis thaliana] (TAIR:AT5G65390.1); similar to 4D11_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67543.1); contains InterPro domain Glutelin; (InterPro:IPR000480) 0.524619378771619 4.76585286151304 0.00065113129958528 1 5.86909606347416 6.08774612157439 0.524619378771619 0.124102142256320 AT5G03460_at 9.06739669154326 8.96888960221696 9.66427806253656 9.56162449648085 9.90218537410895 9.53827927922734 7.68586767302116 7.76690866139975 7.65239447532591 8.02594635326209 9.19521038612104 8.9618989705747 9.04634132796275 9.00748859111556 9.17853543321 8.8421541992137 9.21664138804152 8.88801283140464 7.89689758932694 0.139052465940207 0.134237735716102 0.139167018716259 0.136495134453822 0.139893732010639 0.136677779857434 0.127990331379422 0.13873696065809 0.155039983262749 0.135288589424512 0.126961514651947 0.123050861063803 0.130021546157770 0.130857437926516 0.130114424277677 0.123050861063803 0.128364902233217 0.123050861063803 0.140582908205671 5 5|0 +|/ 864505 865481 865094.444 864280 865677 + gene protein_coding_gene TRUE TRUE AT5G03460.1 similar to Os02g0823600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048570.1); similar to F12E4.230-like protein [Hyacinthus orientalis] (GB:AAS20978.1) 0.42873625250137 4.76438121339352 0.000652635394184327 1 5.8671251194879 17.4696528285304 0.42873625250137 0.0690565499520187 AT5G17670_at 7.90547804521826 7.99981431992961 8.49077573609613 8.18655077161464 8.78058584526906 8.48784815844514 9.06796269956803 8.80929402026357 9.14794842749088 9.29514507398908 10.0320276537306 9.88329895742862 9.80618750103917 9.86676410713456 9.73526383363489 10.0900473465225 9.63643636072812 9.79046403479458 9.34405893250115 0.110909914871064 0.109544207933540 0.110269496546757 0.114077148809848 0.106258713602087 0.112871004661104 0.109129437643684 0.110155992888035 0.115418690828970 0.108067733431895 0.113875626290513 0.107540098809797 0.11611794113569 0.115646583863566 0.119407379905321 0.106683231915061 0.110281783394919 0.114496043615458 0.106258713602087 5 5|0 +|/ 5821886 5822570 5822306 5821062 5822738 + gene protein_coding_gene TRUE TRUE AT5G17670.1 similar to Os02g0129900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045780.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56717.1); contains InterPro domain PGAP1-like; (InterPro:IPR012908) -0.456024561925763 -4.76181290825835 0.000655269131644329 1 5.86368453508494 18.0247613840691 -0.456024561925763 0.0872265893231956 AT5G40540_at 2.90781844347591 3.10943013777889 3.14249082594073 2.89488291165923 3.47861472561087 3.76369439191909 3.41662256946624 3.401808231691 3.39339938671324 4.02427669199576 4.3623513035981 5.4370821691799 3.32327584696928 3.69997318022875 4.81248174499047 3.63681608769578 3.16027175611824 3.9041334542313 3.90157779068004 0.177094302321708 0.174367692171762 0.175030318974175 0.181023608899463 0.172881352026837 0.179291108392338 0.182929660872736 0.175704739877359 0.184612570617673 0.171772315444865 0.176164567256702 0.187675629887514 0.176410693551103 0.176471361904996 0.184579705231242 0.182983776269509 0.173372088551769 0.180580073777628 0.176478215530724 5 5|0 +|/ 16256013 16256628 16256434.8 16254526 16256818 + gene protein_coding_gene TRUE TRUE AT5G40540.1 protein kinase, putative similar to ATN1, kinase/ protein threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT3G27560.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06439.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) -0.43527611710098 -4.75721460861557 0.00066001269329602 1 5.85752160483659 7.17198668769582 -0.43527611710098 0.0741205135880174 AT5G27930_at 8.30053968143968 8.0989257417582 9.1423394960868 9.07262174741867 9.35907864227934 8.86535832190694 7.69510147137397 7.44679883010797 5.65756761143987 7.0052521323535 7.91103396531032 7.82170519023703 8.23825120127146 8.01385532915826 7.53627992764157 7.73555706828498 8.36435298546055 8.09188578752053 6.36100674289874 0.204081101206407 0.203989866856877 0.206472323926136 0.19506398246396 0.198947064909276 0.202799264171913 0.199787169425435 0.19506398246396 0.219518756030253 0.212740933864648 0.203258387990157 0.200497932710900 0.204049053944828 0.201266276322073 0.209132357199069 0.196707374612002 0.204245900719446 0.19506398246396 0.207728818242689 5 5 - 9958230 9959515 9958930.091 9958094 9961268 - gene protein_coding_gene TRUE TRUE AT5G27930.1|AT5G27930.2 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G05640.2); similar to Protein phosphatase 2C-like [Medicago truncatula] (GB:ABE85677.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.481406699577408 4.75082940977471 0.000666659900401899 1 5.8489575917645 15.6502908302588 0.481406699577408 0.102515383347117 AT5G11980_at 7.04556081975315 7.34969396167303 7.28174228925354 7.2385157784539 7.88095431908374 7.55831997281622 7.23035127359477 7.14244402648392 6.68730841014134 6.70682522292572 7.70500161199918 7.94916966505442 7.25194890381581 7.5009254950196 8.04149526116552 7.35333513712532 6.29360014740866 7.75805915458086 6.48260415580388 0.225106610561094 0.213435690283419 0.225745406113564 0.220087332017080 0.224897468529556 0.223536254574265 0.223366988879146 0.214804253588325 0.21904599968817 0.213996770883276 0.212236021111392 0.214428305293784 0.214417062497074 0.219310462013445 0.211674339758861 0.212805525184246 0.231103890321448 0.211674339758861 0.217422527867815 5 5 - 3868839 3869678 3869272.273 3868653 3872270 - gene protein_coding_gene TRUE TRUE AT5G11980.1 conserved oligomeric Golgi complex component-related / COG complex component-related similar to Os12g0538300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066940.1); similar to Gol (GB:CAL50480.1); contains InterPro domain Dor1-like protein; (InterPro:IPR007255) -0.440616007632107 -4.74319862330071 0.000674696757479646 1 5.83871356006605 14.3945833976281 -0.440616007632107 0.0785801774142795 AT5G12390_at 7.46998474522698 7.60319744494839 8.67424135462252 8.64920000705003 8.80501813637374 8.52326748630958 6.50392967989426 6.34337415236785 6.25795614445788 6.39555933786552 7.44308813450112 7.231431194384 7.75388168445174 7.51669794082261 7.01366155187401 7.71897883514949 7.9223950639736 7.7499787781997 6.56041803171709 0.168329882298152 0.169463668679524 0.177827789612141 0.178406021592293 0.174201080213361 0.179858120157805 0.167601837092552 0.172766127672666 0.191064340884772 0.173194425152984 0.182376568869246 0.169707321998370 0.171198496045654 0.174945772405999 0.169298961119042 0.173195908815987 0.177679802601399 0.166838698421235 0.174393970035236 5 0|5 /|- 4010954 4011563 4011221.7 4010444 4012040 - gene protein_coding_gene TRUE TRUE AT5G12390.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G57090.1); similar to Os01g0951800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045414.1); similar to Os05g0383000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055409.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87890.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.416019818509159 4.74295754373158 0.00067495232899869 1 5.83838975347923 14.7957309521490 0.416019818509159 0.0608242705483351 AT5G24510_at 1.15361524871032 1.39138143588278 1.80277867820063 2.19105286477681 1.93805081086511 2.01078848134142 1.52514971786932 1.16801869554815 1.30112622038985 1.05340442853766 1.63988868626682 1.65038523312287 1.43895758327543 1.64295744718794 1.85036824229735 1.84552742419353 1.61068004475065 1.83951466287710 1.223726555443 0.198448337397457 0.206769481912112 0.214743881387967 0.194913308247406 0.192086884603874 0.209175748552194 0.191455565565754 0.201090514411988 0.198797044559673 0.194045327456084 0.193240593203262 0.195965066468581 0.194101808783128 0.196679378838492 0.193456846993099 0.191455565565754 0.199646896650159 0.193145355034520 0.195455391265435 5 5|0 -|/ 8369441 8369813 8369559.333 8369298 8369869 - gene protein_coding_gene TRUE TRUE AT5G24510.1 60s acidic ribosomal protein P1, putative similar to 60S acidic ribosomal protein P1 (RPP1B) [Arabidopsis thaliana] (TAIR:AT4G00810.2); similar to ribosomal protein P1 [Triticum aestivum] (GB:AAW50990.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) 0.477297185284665 4.73857176464446 0.000679619657548973 1 5.83249720215505 3.08887315012596 0.477297185284665 0.100925583721859 AT5G40680_at 2.40090184647654 2.73745673162664 2.77492976854498 3.07725402213664 2.0899617768296 2.17854527434274 2.22073091429487 2.66059183638936 3.01694006038420 3.41953557998519 2.67105253846903 2.98587582278286 3.4262172330886 2.97465454070950 2.71036434574161 3.04134669162929 2.88642760392736 3.02327433748086 3.2803250125686 0.194789871878957 0.195508629845955 0.198876668785548 0.205475337891843 0.193019656293827 0.198907113352766 0.194192744203137 0.198436757431964 0.198210061806844 0.195123612136422 0.195318425354527 0.192983807088478 0.198242355136769 0.198661318942197 0.196338619255813 0.204249618885129 0.197801651261682 0.201955843067156 0.203409579405867 5 5 + 16306643 16307204 16306943.636 16305982 16307229 + gene protein_coding_gene TRUE TRUE AT5G40680.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G27150.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE79891.1); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.494422530525625 -4.73756110807866 0.000680700023144293 1 5.83113884699055 5.61946411643415 -0.494422530525625 0.110266354090153 AT5G03530_at 3.07133658853403 3.3353018781819 4.87868666989128 4.24409337956992 6.56866710630516 5.49045925607148 4.27208046078268 4.32047844105092 4.17681901414154 4.11583833926996 6.54979646526762 5.68254190066452 5.50397911157782 6.68424589017409 5.36799756489925 6.22316478963155 5.42835181119913 6.28637752323936 4.3683793990803 0.243880665863409 0.235000036084453 0.246566914592258 0.243315330669739 0.251243896130392 0.235000036084453 0.235000036084453 0.239707865236249 0.246100741045037 0.241869586955514 0.239340410599053 0.240515386328510 0.251425905283268 0.249616087419923 0.235317389747943 0.237507610600323 0.252599167777178 0.25096250378819 0.245657851410699 5 5|0 -|/ 885741 886957 886419.333 885521 887389 - gene protein_coding_gene TRUE TRUE AT5G03530.1 ATRAB ALPHA (Arabidopsis Rab GTPase homolog C2a); GTP binding similar to AtRABC2b/AtRab18C (Arabidopsis Rab GTPase homolog C2b), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09910.1); similar to RAB1X [Lotus japonicus] (GB:CAA98163.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.746053432775243 4.73445484550434 0.000684031915660167 1 5.8269628070952 9.61571420567122 0.746053432775243 0.221432950414163 AT5G09400_at 3.76244474212928 3.48479496674624 4.88822714181788 5.09726016702349 5.95902514551644 4.98186572017221 3.43821096158343 3.77179310643217 2.52370500739605 2.01580253849086 2.99531857354682 3.07157898673991 3.47508382439062 3.37581243163233 2.85418995431117 3.35827879925856 3.23685187334282 3.01579847849805 2.14053007951665 0.241728635120084 0.236309570435524 0.232668855016967 0.240532872795799 0.236024047895999 0.235496104286565 0.233419901226765 0.224292640316390 0.228208633085654 0.223776143286988 0.226106158970757 0.224712239447032 0.22920112953962 0.227134570237344 0.235557190622434 0.220540413915680 0.238075849187730 0.244126634244901 0.231244609376595 5 5 + 2916568 2917774 2917345.273 2916217 2920760 + gene protein_coding_gene TRUE TRUE AT5G09400.1 KUP7 (K+ uptake permease 7); potassium ion transporter potassium transporter Identical to Potassium transporter 7 (AtPOT7) (AtHAK7) (POT7) [Arabidopsis Thaliana] (GB:Q9FY75;GB:Q9M7K1); similar to KUP5 (K+ uptake permease 5), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT4G33530.1); similar to KUP10 (K+ transporter 10), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT1G31120.1); similar to potassium transporter family protein [Arabidopsis thaliana] (TAIR:AT1G60160.1); similar to putative potasium transporter [Oryza sativa (japonica cultivar-group)] (GB:CAD21005.1); similar to Probable potassium transporter 14 (OsHAK14) (GB:Q69RI8); similar to K+ potassium transporter [Medicago truncatula] (GB:ABE93376.1); contains InterPro domain K+ potassium transporter; (InterPro:IPR003855) 0.664691813486351 4.73182375734524 0.00068686760255725 1 5.82342426416176 7.12272440576909 0.664691813486351 0.188534442469276 AT5G09800_at 1.29156222976334 1.31131966646373 1.65030382158550 2.05905067712947 1.43946057805839 1.51896502306928 1.12447965388287 1.00349445162265 0.555307157309952 1.43301579906832 1.61337789543577 1.86253537917904 1.59146186806710 1.52101730505529 1.61748696537993 2.08772738942182 1.47431312870923 1.92125374076802 1.40917682471147 0.210014237837902 0.201399335309122 0.214190492925701 0.215114934825698 0.207710161499818 0.210342431660304 0.210764031515735 0.202534095378717 0.210086857222166 0.216420257244696 0.204710207663383 0.206667912770088 0.202419986470034 0.204968607809783 0.201749118760772 0.201906910853467 0.205210683300274 0.208974016856319 0.208057164476266 5 5 - 3043198 3043687 3043409.182 3043013 3044414 - gene protein_coding_gene TRUE TRUE AT5G09800.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G64660.1); similar to U box [Medicago truncatula] (GB:ABE81171.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.434217551927827 4.72975869550884 0.000689101949643359 1 5.82064611772706 2.84665283071287 0.434217551927827 0.0751190258282434 AT5G09500_at 3.70884713401428 3.22020488233818 3.73183590279565 3.63724772236645 3.20690909870761 3.58870624293103 3.66940757275649 3.26225769190675 3.25305767669131 3.27275093113591 3.09893508776824 2.98725599141808 3.70328364446632 3.23083846813502 3.21348553948582 3.16369043901327 3.4621390429083 3.09480555504126 3.28950884614846 0.208194981935829 0.207859097064314 0.217224466992685 0.210495085515204 0.204680818269741 0.211489557883343 0.207549362972131 0.207869477037936 0.205996161002888 0.205796864843085 0.207470977597688 0.205249938226299 0.210282975388123 0.213908191018835 0.208222836597831 0.216491527829236 0.213484340707830 0.210543923221237 0.204680818269741 5 5|0 -|/ 2954084 2954728 2954277.7 2953914 2954919 - gene protein_coding_gene TRUE TRUE AT5G09500.1 40S ribosomal protein S15 (RPS15C) Identical to 40S ribosomal protein S15-3 (RPS15C) [Arabidopsis Thaliana] (GB:Q9FY65); similar to 40S ribosomal protein S15 (RPS15E) [Arabidopsis thaliana] (TAIR:AT5G43640.1); similar to 40S ribosomal protein S15 (GB:P31674); similar to Os03g0798600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051572.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713) -0.531313050852701 -4.72831147138076 0.000690672388521817 1 5.81869870819157 6.7612153838211 -0.531313050852701 0.129416458497673 AT5G35360_at 9.47914761704713 9.5139316554667 9.05111532648443 9.21857235831182 9.85221052777139 9.53598474430721 9.9796565694041 9.97624409344045 9.99827471263477 9.8544393500412 10.9954354122464 10.9654119734008 10.4585937800087 10.8218145911595 11.1349561291590 10.3407039764653 10.1311730480932 10.8068514923762 9.7609909547715 0.0721037217185427 0.0694158347577161 0.0714173810654612 0.0707840402881653 0.069898509996051 0.0725013187938596 0.0709755823519539 0.0765530844660793 0.0703617807438847 0.0698429673998597 0.0682550093305339 0.0692728795198066 0.0682002845663024 0.0707559083608327 0.0694703510587256 0.068734431200196 0.0721351578785915 0.0707417623383506 0.0693484187833784 5 5|0 +|/ 13603996 13605020 13604549.429 13601388 13605726 + gene protein_coding_gene TRUE TRUE AT5G35360.1|AT5G35360.2 CAC2 (acetyl co-enzyme A carboxylase biotin carboxylase subunit) Encodes biotin carboxylase subunit (CAC2). similar to MCCA (3-methylcrotonyl-CoA carboxylase 1) [Arabidopsis thaliana] (TAIR:AT1G03090.2); similar to biotin carboxylase precursor [Glycine max] (GB:AAC23573.1); similar to acetyl-CoA carboxylase [Glycine max] (GB:AAF80469.1); similar to biotin carboxylase [Brassica napus] (GB:AAK60339.1); contains InterPro domain Acetyl-CoA carboxylase, biotin carboxylase; (InterPro:IPR004549); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Rudiment single hybrid motif; (InterPro:IPR011054); contains InterPro domain Biotin carboxylase, C-terminal; (InterPro:IPR005482); contains InterPro domain Carbamoyl-phosphate synthase L chain, ATP-binding; (InterPro:IPR005479); contains InterPro domain Biotin carboxylation region; (InterPro:IPR011764); contains InterPro domain Carbamoyl-phosphate synthetase large chain, N-terminal; (InterPro:IPR005481)|similar to MCCA (3-methylcrotonyl-CoA carboxylase 1) [Arabidopsis thaliana] (TAIR:AT1G03090.2); similar to biotin carboxylase precursor [Glycine max] (GB:AAC23573.1); similar to biotin carboxylase subunit (GB:AAC41659.1); similar to biotin carboxylase [Brassica napus] (GB:AAK60339.1); contains InterPro domain Acetyl-CoA carboxylase, biotin carboxylase; (InterPro:IPR004549); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Rudiment single hybrid motif; (InterPro:IPR011054); contains InterPro domain Biotin carboxylase, C-terminal; (InterPro:IPR005482); contains InterPro domain Carbamoyl-phosphate synthase L chain, ATP-binding; (InterPro:IPR005479); contains InterPro domain Biotin carboxylation region; (InterPro:IPR011764); contains InterPro domain Carbamoyl-phosphate synthetase large chain, N-terminal; (InterPro:IPR005481) -0.415802545343287 -4.72062705042878 0.000699074651680832 1 5.80835226858442 19.8649091396189 -0.415802545343287 0.0622184292119826 AT5G51740_at 7.50424931780609 7.58434265653938 8.87924859018701 8.77296988408255 8.70055661937388 8.61206502636713 7.31873735876583 7.43886301940126 6.91641723955943 6.96315700551795 8.19246166522338 8.03536775344538 8.37699939269804 8.36952444176394 8.07542844188057 8.2641001513805 8.03287288502518 8.42453440500809 6.64347956626333 0.132890773391454 0.135081681548581 0.127764570568613 0.130538393323308 0.130467215943850 0.132940868975674 0.131760289429984 0.131878844773779 0.144690559115786 0.136527564699098 0.127329139913981 0.128215342712486 0.126455521824038 0.129600719284253 0.130773214671176 0.126834228761229 0.130587617011006 0.129648905278415 0.140510845617025 5 5 + 21035097 21036175 21035675.909 21034253 21036447 + gene protein_coding_gene TRUE TRUE AT5G51740.1 peptidase M48 family protein similar to Os02g0735100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048044.1); similar to putative protein [Ipheion uniflorum] (GB:AAX21203.1); contains InterPro domain Peptidase M48, Ste24p; (InterPro:IPR001915) 0.386610174639390 4.70652857641836 0.000714772267509506 1 5.78934293736339 15.6325935986487 0.386610174639390 0.0345984024856833 AT5G59480_at 6.30858652252857 6.57727281921237 7.0745183617648 7.23364283153054 7.03141997958202 6.74554182074464 8.58261972450556 8.34268213496042 6.61431728397474 6.6866693640807 8.38764220784029 9.11813364229752 7.94955450576929 7.76636921184914 8.31126401790943 7.71749343804605 7.68613520224004 8.0271259689294 6.39193532576685 0.214289216244608 0.209203390431154 0.208542868100823 0.214103897137487 0.203349389102769 0.208047572506161 0.20446522319111 0.212867005316024 0.224851253097252 0.203298278693456 0.209036249699341 0.203221353541667 0.203221353541667 0.213003204615929 0.203221353541667 0.203221353541667 0.210312918032891 0.216841950176772 0.221108643185669 5 5|0 -|/ 23996847 23997672 23997318.8 23996616 23998816 - gene protein_coding_gene TRUE TRUE AT5G59480.1|AT5G59480.2 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834)|similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to HAD-superfamily hydrolase subfamily IA, variant 3 [Medicago truncatula] (GB:ABE82011.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) -0.445491216483172 -4.70215075601113 0.000719722091929614 1 5.78343313354199 14.5794215738374 -0.445491216483172 0.0842136861036342 AT5G44820_at 5.8345484589496 6.2647422040986 7.55485672984208 7.54671704704583 6.66355083115058 5.87386573941721 4.06513774732205 4.00473593851915 3.77161291400933 2.77201437489377 4.18130383687707 4.34296660409544 3.96732197213469 4.60281682935272 3.80932118660657 4.13847470617074 4.2268400399947 4.74810632730143 2.88101921303895 0.218008774456925 0.21556306010035 0.218923883663070 0.219816720702585 0.218727659023999 0.214620212024258 0.215766701743529 0.218225587008553 0.216360381573034 0.220026748017220 0.215830720596108 0.214512567758947 0.217073196156213 0.216632955462041 0.222093582426684 0.213538679248713 0.214992284748635 0.223642277120705 0.217089320770194 5 5 - 18113051 18114660 18113811.143 18112940 18114812 - gene protein_coding_gene TRUE TRUE AT5G44820.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19970.1); similar to H0307D04.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66858.1); contains domain (Trans)glycosidases (SSF51445); contains domain PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN (PTHR10483) 0.585043148221895 4.70032569158753 0.000721796302144797 1 5.78096841262772 9.67286572294182 0.585043148221895 0.155978214518323 AT5G20290_at 11.8807599608249 12.0075515995800 11.9897032456223 11.9529664174288 12.1831069791407 11.7007725141373 11.9436256351982 12.1196718782289 11.7194617931428 11.7823048724845 12.0199404791477 12.1446633649279 11.9233013391020 11.8360365827499 12.3314430130161 11.6259956705850 11.3954593069519 11.8110047836909 11.7494386279447 0.0670488751874849 0.0653180663646881 0.0659113123091783 0.0644433552395974 0.0652839283961433 0.0761284115557029 0.0640563582652259 0.0659881808218869 0.0743699262637313 0.0651000082327469 0.0641318064508163 0.0638801377837856 0.0646013937586543 0.0671327568787774 0.0638801377837856 0.065023498874897 0.0704824894172844 0.0683516646313429 0.0656651272146869 5 5|0 -|/ 6851868 6852454 6852118.7 6851454 6853066 - gene protein_coding_gene TRUE TRUE AT5G20290.1 40S ribosomal protein S8 (RPS8A) Identical to 40S ribosomal protein S8-1 (RPS8A) [Arabidopsis Thaliana] (GB:Q93VG5); similar to 40S ribosomal protein S8 (RPS8B) [Arabidopsis thaliana] (TAIR:AT5G59240.1); similar to Os04g0349500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052526.1); similar to 40S ribosomal protein S8 (GB:Q08069); contains InterPro domain Ribosomal protein S8E; (InterPro:IPR001047) -0.457267169766297 -4.69713025889593 0.000725443177091247 1 5.77665162881775 23.7904609447929 -0.457267169766297 0.0917458289132114 AT5G65410_at 2.74319771329050 2.94387230093181 2.46975660867122 2.31500646058012 2.49254094059275 3.35224575060371 2.58025031870662 3.03081521495815 3.33600703455746 3.23558984221086 2.77778759738846 3.27737803718164 3.08342593024539 2.79808731305404 3.5057343363823 3.07292770141498 2.80721042525246 3.01677544832529 3.29165174806569 0.209489141571071 0.218215216529443 0.207688834098248 0.207839101340383 0.212376560979398 0.203779619156088 0.208207951660189 0.210568419514292 0.215580290853598 0.205669121515325 0.203779619156088 0.205559184919726 0.207717357680916 0.203779619156088 0.205224199087683 0.203779619156088 0.205148793524385 0.229404460586306 0.209238024013968 5 5 + 26153665 26154144 26153846.091 26153320 26154409 + gene protein_coding_gene TRUE TRUE AT5G65410.1 ATHB25/ZFHD2 (ZINC FINGER HOMEODOMAIN 2); DNA binding / transcription factor Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family. Identical to ZF-HD homeobox protein At5g65410 [Arabidopsis Thaliana] (GB:Q9FKP8); similar to ATHB22/MEE68 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22, maternal effect embryo arrest 68), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G24660.1); similar to ZF-HD homeobox protein [Flaveria bidentis] (GB:CAC34447.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) -0.624284459877966 -4.69398909668349 0.000729047091127743 1 5.7724064213285 5.90604335867531 -0.624284459877966 0.173600567652784 AT5G28800_at 1.57058776833657 1.32727380074794 1.7192238699068 1.63476107120944 1.41931704146844 1.50824167540976 1.61989794935332 1.59904273556165 2.36450328709221 2.11684985959364 1.73961289501086 1.78094406089165 1.49952096317759 1.68609354339932 1.51698979590813 1.47634552957390 1.65585239496222 1.74742178983676 2.14154111880102 0.192740879615041 0.192740879615041 0.199065487960338 0.194456970576883 0.197677463556616 0.194605026533707 0.193326239332235 0.193791123170082 0.193495437859107 0.194113361264419 0.192740879615041 0.193479057929434 0.198281377829243 0.194560682555047 0.195017533986018 0.192740879615041 0.201184378535385 0.19967614286615 0.205662813116536 5 0|5 /|+ 10823380 10823609 10823489 10822884 10823642 + gene protein_coding_gene TRUE TRUE AT5G28800.1 unknown protein -0.395575270495149 -4.6812908220646 0.000743809953369727 1 5.75522744101361 3.47253276071125 -0.395575270495149 0.0472911826973546 AT5G44170_at 4.8138427103932 4.98230820488088 6.11524653668122 6.26466081795575 6.2684493568479 5.85950882060395 4.91360269662693 4.76682800484046 3.92009601358557 3.17492528259194 4.85069622705155 4.77641550323276 5.0139739400176 4.83746444964597 5.37085932270068 4.833921023442 5.02828337816327 4.87860998734889 3.41260051504923 0.221997631766739 0.221997631766739 0.231525779278682 0.228253142829145 0.230393556074531 0.229957317220002 0.221997631766739 0.231137043137942 0.23496747024671 0.225056823653609 0.225234837467454 0.221997631766739 0.224667625183073 0.224380430555801 0.234144628632393 0.221997631766739 0.232817157586234 0.227541770251598 0.228909443513905 5 5 + 17797727 17798224 17797912.182 17797605 17798510 + gene protein_coding_gene TRUE TRUE AT5G44170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08125.1); similar to Os05g0564100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056330.1); similar to DNA ligase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22961.1); contains domain no description (G3D.3.40.50.150); contains domain Diol dehydratase, gamma subunit (SSF47148); contains domain UNCHARACTERIZED (PTHR14614) 0.444165834185076 4.68028379637341 0.00074499414503022 1 5.75386387283874 9.72371518495008 0.444165834185076 0.0846873056588174 AT5G09920_at 8.77603522122568 8.89539159399777 9.81506925345464 9.9552870956258 10.3624550440498 9.97547107469877 9.0819356023232 8.74239142785755 7.91575591533099 8.14255677917665 9.38736221005478 9.31682551594786 9.36644392003485 9.3013177810895 9.10422048591741 9.5994564577361 9.49434784952655 9.22340448331134 8.10152905692229 0.179721033141624 0.172218897448674 0.168186669928683 0.167627244278744 0.167069947088615 0.172482104654614 0.168873725997053 0.172075601097975 0.192365551104931 0.177557654220080 0.17104884827113 0.167446871393363 0.165318382544798 0.174006735214138 0.174099170392930 0.165318382544798 0.17312612502901 0.170893673701889 0.178456888452964 5 5|0 +|/ 3096298 3097116 3096688.556 3096184 3097576 + gene protein_coding_gene TRUE TRUE AT5G09920.1 RPB15.9 (RNA polymerase II 15.9) 15.9 kDa subunit of RNA polymerase II similar to 4D11_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67517.1); contains InterPro domain HRDC-like; (InterPro:IPR010997); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590); contains InterPro domain RNA polymerase Rpb4; (InterPro:IPR005574) 0.459957688528738 4.67507638391896 0.00075114954794883 1 5.74680992914011 18.1517310000353 0.459957688528738 0.094620527721068 AT5G40020_at 2.24237730236433 2.61988951125075 3.64000316899904 3.85607130091097 2.86557899730167 3.1414578715417 2.51167829318077 3.29526831447640 3.12255140693491 3.05402910253078 4.96155402011102 4.13839311614352 4.63703492114936 5.41530712190757 4.04253395955186 5.2077554274481 5.55521327879252 6.28261495935055 3.70257458259845 0.317669329986121 0.313288787685181 0.29067657745328 0.298033970799954 0.291792527842071 0.302673623148172 0.295833082312354 0.306096459929256 0.307444362370146 0.294012845862298 0.302664953092164 0.294051743428158 0.303755969357964 0.305873402742607 0.301544454680084 0.296354534872476 0.314405746936421 0.300506325875514 0.296305867501135 5 5 - 16040125 16041197 16040590 16039981 16041544 - gene protein_coding_gene TRUE TRUE AT5G40020.1 pathogenesis-related thaumatin family protein similar to ATLP-1 (Arabidopsis thaumatin-like protein 1) [Arabidopsis thaliana] (TAIR:AT1G18250.1); similar to Thaumatin, pathogenesis-related [Medicago truncatula] (GB:ABE78554.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 0.595637230627545 4.67251950383857 0.00075419153782708 1 5.74334465801273 7.18309186895896 0.595637230627545 0.162277242131015 AT5G06970_at 7.72483887435851 7.62446240093731 7.97408323841077 7.9234019835609 8.3492596438901 8.33728482566529 8.10402311394009 7.79756493323221 8.5231531536432 8.31087373992989 9.49525472823555 9.2226834215259 8.76507430442018 8.95279598084619 9.17348251078037 8.68739896186228 8.45486127856644 8.91264987874784 8.27070007580625 0.119327031282174 0.124959047687935 0.113527575373346 0.119878087366134 0.118485732891735 0.125154180084652 0.125897405000107 0.117891065395808 0.134518755995542 0.117484967493065 0.114945345922639 0.118694304434664 0.114335327015521 0.118130061619816 0.118063953204998 0.118001410886270 0.120998349507441 0.120225699558695 0.117912410036107 5 5|0 -|/ 2158487 2159599 2158870.667 2158229 2166399 - gene protein_coding_gene TRUE TRUE AT5G06970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20010.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP68377.1); similar to Protein of unknown function DUF810 [Medicago truncatula] (GB:ABE85501.1); similar to unknown protein [Oryza sativa] (GB:AAK14418.1); contains InterPro domain Protein of unknown function DUF810; (InterPro:IPR008528) -0.404553115182812 -4.67042560200458 0.000756692398866696 1 5.74050600072785 16.6424986048742 -0.404553115182812 0.0565293168373447 AT5G50820_at 3.51755496316019 3.42831468284904 3.79505347472953 3.87024076243668 3.33277639421887 3.58280056270403 3.92097572706216 3.50965756820676 3.16226678722983 3.72792835767163 3.80619770449821 4.28755633065759 3.84033335209475 3.98808031869686 4.0729199322323 3.70400913404933 3.62068254693257 3.63451056215986 3.65102915942999 0.198334981347113 0.193586583798786 0.194373076420514 0.204410158561808 0.189726751139795 0.190223238390637 0.194206899421422 0.212936809212183 0.202671150396861 0.190496114772333 0.19394382526819 0.197057503696822 0.191351191216582 0.192243672303906 0.191674001800180 0.193188098469231 0.191396816174140 0.200367795888539 0.197401277085955 5 5 + 20696483 20697184 20696741.182 20696451 20697351 + gene protein_coding_gene TRUE TRUE AT5G50820.1 ANAC097 (Arabidopsis NAC domain containing protein 97); transcription factor similar to ANAC083 (Arabidopsis NAC domain containing protein 83), transcription factor [Arabidopsis thaliana] (TAIR:AT5G13180.1); similar to No apical meristem (NAM) protein [Medicago truncatula] (GB:ABE89388.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.444664398958624 -4.66845796071349 0.000759050441917927 1 5.73783781626475 7.31118560189207 -0.444664398958624 0.0857121543621968 AT5G13980_at 8.48622853054187 8.44931214063056 8.66885764941017 8.49368070551897 9.0818636321923 8.45129864670534 8.53071802247534 8.50218260645045 8.49335917165952 8.87195987973099 9.37491123910957 9.6204160265797 9.18762496726555 8.9883601098567 9.4447835477596 9.23479025327531 8.77911332566998 9.3261826468484 9.06779419258337 0.123220374760094 0.115663883559959 0.121721754922921 0.134223935762247 0.119562106850952 0.124326748424041 0.120002721897839 0.132809218882430 0.144566730146516 0.124904246014794 0.120351018247808 0.122978686629107 0.11920948140862 0.121126002670157 0.121872969096693 0.115663883559959 0.122226715740431 0.127514849241141 0.125380330140481 5 0|5 /|+ 4513522 4514299 4513906.333 4508498 4514668 + gene protein_coding_gene TRUE TRUE AT5G13980.1|AT5G13980.2|AT5G13980.3 glycosyl hydrolase family 38 protein|alpha-mannosidase similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT3G26720.1); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G66150.1); similar to Glycosyl hydrolases family 38 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22500.1); similar to Glycosyl hydrolases family 38 C-terminal domain, putative [Medicago truncatula] (GB:ABE88173.1); similar to glycosyl hydrolase family 38 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65906.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Glycosyl hydrolases 38, C-terminal; (InterPro:IPR011682); contains InterPro domain Glycoside hydrolase, family 38; (InterPro:IPR000602) -0.492950162620039 -4.66447228857112 0.000763850725436273 1 5.7324310521426 17.6107979980091 -0.492950162620039 0.113542357444280 AT5G49510_at 7.85389114505664 7.94916173185653 8.4205513982675 8.57505192540372 8.78573345429424 8.13729810580975 8.28031053899413 8.2879503215651 7.43342492459885 7.45667662581758 7.849088439751 7.85961186630169 8.04312346241834 8.07799109142235 8.01532793298626 8.03237284970958 7.64958789816386 7.80207060067579 7.49460979621911 0.209963719904233 0.201296400414413 0.201560925721372 0.208466023251576 0.205423970149066 0.211371819031347 0.199146087669393 0.199585670651379 0.209566182470354 0.197672998417632 0.206650061011428 0.196131771701712 0.199675636359130 0.206197505557592 0.196341462992214 0.203325689228075 0.214847026703972 0.211186769008107 0.203581445277957 5 5|0 +|/ 20097959 20099641 20098819 20097840 20100147 + gene protein_coding_gene TRUE TRUE AT5G49510.1|AT5G49510.2 VHL binding protein, putative / prefoldin, putative|protein binding Identical to Probable prefoldin subunit 3 [Arabidopsis Thaliana] (GB:P57741); similar to Vbp1-prov protein [Xenopus laevis] (GB:AAH54252.1); similar to Os12g0562900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067032.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Prefoldin alpha-like; (InterPro:IPR004127) -0.49816647821932 -4.6598283808847 0.000769484240144923 1 5.72612787187968 15.9751021859345 -0.49816647821932 0.116535795063323 AT5G22760_at 7.73373554301197 7.38768949608623 8.02104266710709 7.94343447163678 8.20759943521226 7.9841402287711 7.10300132730337 7.2584942396297 7.53792136667234 7.25518215986968 7.78152231858607 7.87433910220394 7.78328982694195 7.94837523249082 7.56668165814065 8.05458628501411 8.01795757526135 7.68331139121035 7.55269508431478 0.139277873494873 0.137758383214838 0.145237583474762 0.148133794543368 0.137126485084090 0.138632781176983 0.134812614473060 0.144432407262148 0.141695461982191 0.138024963405923 0.145423163709124 0.139509741544086 0.144817045988805 0.145133259485667 0.138775078367776 0.135311295884525 0.136540087383347 0.142709120055923 0.141511372445305 5 5 + 7577113 7577630 7577374.273 7571638 7577869 + gene protein_coding_gene TRUE TRUE AT5G22760.1 PHD finger family protein similar to peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein [Arabidopsis thaliana] (TAIR:AT5G35210.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92741.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DDT; (InterPro:IPR004022) -0.431001953938377 -4.65900813056975 0.000770483834300029 1 5.725014155576 15.3485709064365 -0.431001953938377 0.0773697503474167 AT5G65270_at 8.15294947675953 8.23861443574329 9.09406962851178 9.29960107657701 9.17097247264395 9.13439868371528 8.49252194837545 8.2332003699274 7.75775137493376 7.63394206694431 9.65189416055329 9.36873812868426 8.91526945934725 9.12558809913426 9.26784079432725 9.00786356833943 8.62515497057636 9.0279424673489 7.19496085646453 0.147151154913227 0.142721178222504 0.143937159392927 0.145009116006983 0.142721178222504 0.143107348406705 0.146315999315232 0.143274046950685 0.168095360789743 0.152908275185374 0.142721178222504 0.145815888417835 0.142721178222504 0.150132560234230 0.145952627929928 0.142721178222504 0.152076419689726 0.148934095639933 0.166702272504779 5 5 + 26100754 26101710 26101336.818 26100554 26101940 + gene protein_coding_gene TRUE TRUE AT5G65270.1 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding similar to ATGB3 (GTP-BINDING PROTEIN 3), GTP binding [Arabidopsis thaliana] (TAIR:AT4G39990.1); similar to 80A08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67615.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.40702535380214 4.65884807783461 0.0007706790416169 1 5.72479682614998 17.0533766226082 0.40702535380214 0.0594882761757909 AT5G53500_at 5.49736775704754 5.33034525220613 5.53545934769462 5.49193351451913 7.34295123186909 7.02572136008771 7.29688692725126 7.02785500828632 6.77964446624353 6.2930171203555 8.02246797169477 7.75428056348895 8.07250634211286 7.97806693167108 7.16868533506808 7.20318083597822 6.86161025420851 7.533647846804 6.15496108325301 0.205786736456001 0.213870416552255 0.211818826092064 0.207315715701762 0.205343313035318 0.220404272167529 0.204414977451066 0.202926648880898 0.208551169697579 0.202061698280633 0.205751639485386 0.20735236681317 0.200285683404897 0.215889780026651 0.203706538052711 0.200285683404897 0.205932659745025 0.206243351284030 0.203571870512823 5 5 - 21743395 21744010 21743627.818 21742667 21746526 - gene protein_coding_gene TRUE TRUE AT5G53500.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G24320.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.431722632882824 -4.65780760552297 0.000771949320939827 1 5.72338390039858 13.3103217082431 -0.431722632882824 0.077933027017951 AT5G61810_at 6.86908890938829 7.24806689382063 7.75239230347708 7.90739597687236 8.5140399578066 7.87423711227014 6.9406559848665 7.12066168411562 6.2149301549655 6.21342927780886 8.8192227375206 8.72242778518089 8.5330224420187 8.8522965197662 7.790666897017 8.1060176812643 7.43060038990594 8.11458385352532 6.18216597031561 0.208764476524899 0.202277600091974 0.214883891868852 0.201323162346847 0.208173515760387 0.208139725905691 0.211217718597983 0.204113294024509 0.217010440605175 0.215051199603593 0.208953182530855 0.208816127310860 0.201051431925154 0.219132364620911 0.202440321824631 0.205998266846427 0.226292963421742 0.204536784908841 0.207355870807203 5 5|0 -|/ 24849101 24849743 24849409 24848845 24851128 - gene protein_coding_gene TRUE TRUE AT5G61810.1|AT5G61810.2 mitochondrial substrate carrier family protein|calcium ion binding similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993)|similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.533964452358637 4.64855834129295 0.000783339095862502 1 5.71081544631138 14.7781239808129 0.533964452358637 0.135093545138688 AT5G60270_at 2.59915583154728 2.89945511023773 2.88091391113978 3.11832770014991 2.9782079511879 3.00724509229205 3.47412160366349 2.99443081984755 3.57131233938234 3.1172022313516 4.06471437811217 3.36532852319563 3.43275590696854 3.75739782511767 3.26733323202306 2.64208837687315 2.69469156162509 3.75551187119795 3.37248761284598 0.175879733716255 0.171115637701344 0.178329609957986 0.181968400730022 0.174663547755900 0.176437341262336 0.173878352524385 0.185595973644275 0.187809623356273 0.172506766684451 0.176163113094465 0.174373906608242 0.171115637701344 0.175415979864728 0.178825726079239 0.175609338326808 0.187074409298568 0.171592591192052 0.174839750086565 5 5 + 24276478 24276966 24276768.182 24274976 24277269 + gene protein_coding_gene TRUE TRUE AT5G60270.1 lectin protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60280.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45440.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.477772341629044 -4.6473826014704 0.0007847995908678 1 5.70921671608646 6.3570548044661 -0.477772341629044 0.106325349848176 AT5G55540_at 5.83523248866547 5.56026300313217 5.21590131993146 5.57564825799218 6.55686088068181 6.58331885268409 5.9844906881024 5.85313740507689 6.1210893596181 5.8535746045783 6.76332124248884 7.47138319613064 6.92563172392307 7.02524841882073 7.21544031402879 6.61847951907965 6.74891714198066 6.97718673682417 5.83145075279215 0.192217613857655 0.178183779253706 0.186116945488674 0.191818112273760 0.178102330814763 0.180098969593088 0.186371074464974 0.176564396496213 0.181761917432842 0.177812840480632 0.179699600193073 0.179772447203372 0.178010695894392 0.182255779273702 0.188809390759513 0.180785837482102 0.185667531142878 0.183496015105285 0.198007285227487 5 5 - 22513548 22514064 22513813.545 22513422 22517769 - gene protein_coding_gene TRUE TRUE AT5G55540.1 TRN1 (LOPPED 1, TORNADO 1) Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. similar to EMB2004 (EMBRYO DEFECTIVE 2004), protein binding [Arabidopsis thaliana] (TAIR:AT1G10510.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAR87265.1); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor type; (InterPro:IPR007091) -0.436400760311228 -4.64690804014155 0.000785389901347016 1 5.70857135606767 12.3473929165279 -0.436400760311228 0.0817176851686442 AT5G27280_at 9.97773200776335 10.1631904417248 10.7081015533780 10.7514793044404 10.7290633817799 10.7085830889720 9.38057562199805 9.80211256540808 9.1160786866908 9.24043372059637 10.6744736976129 10.1677454372484 10.4928828873632 10.4813657050702 10.2443663733461 10.1864200510628 10.2445533909112 10.4666467331754 8.83340543781162 0.119160190890097 0.112684939125999 0.115521119787259 0.116844073843523 0.115825240230302 0.119049397953601 0.118026423695441 0.112684939125999 0.12519122153396 0.125771277187470 0.115653207492028 0.117033888780798 0.112684939125999 0.123030170309561 0.118245364770403 0.112684939125999 0.117382865170354 0.119815558808727 0.129396967046388 5 5 + 9617626 9618263 9617984.364 9617489 9618484 + gene protein_coding_gene TRUE TRUE AT5G27280.1 zinc finger (DNL type) family protein similar to zinc finger (DNL type) family protein [Arabidopsis thaliana] (TAIR:AT1G68730.1); similar to Os06g0724400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058612.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61688.1); contains InterPro domain Zinc finger, Zim17-type; (InterPro:IPR007853) 0.433843421553709 4.64536142566308 0.000787317002179045 1 5.70646783045804 19.9941611121031 0.433843421553709 0.0801281024535517 AT5G61530_at 10.0935589617935 9.84647328118493 10.9182361798052 10.7488570866481 11.0071118082150 10.8099450761534 9.24789377467846 9.01752281952436 9.09633198574617 8.96943200984209 9.931797082457 9.72519515634126 9.88434802961895 10.0125055942664 9.589384025111 9.87590003150292 10.1050804290824 10.0696353777254 8.95311436173419 0.0787074215426687 0.0765851824588728 0.0801323068101242 0.0769802698584414 0.0791858726135196 0.0816450080097137 0.0828586769210486 0.0832104486415556 0.0857170419336856 0.0854360996577633 0.0782696179724964 0.0770612237758283 0.0793397518602577 0.0818371974763537 0.0831926443191643 0.0774590411383672 0.0796542901470143 0.0792902342232285 0.0829999127352562 5 5 + 24761059 24761738 24761343.545 24759274 24762010 + gene protein_coding_gene TRUE TRUE AT5G61530.1|AT5G61530.2 small G protein family protein / RhoGAP family protein similar to hypothetical protein LOC550478 [Danio rerio] (GB:NP_001017781.1); similar to Os07g0486500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059663.1); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198)|similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97162.1); similar to Os07g0486500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059663.1); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198) 0.424309066248040 4.64288447538284 0.000790413718368027 1 5.70309810515847 19.663961624269 0.424309066248040 0.073763950687348 AT5G40550_at 2.64199411681653 2.52919866404753 3.54081699727236 3.45674543604995 4.06301908411365 3.18027969553189 2.68888154524726 2.56671122570379 2.50762555525316 2.79659140625111 3.96425595087032 4.16439394843728 3.70510335114293 3.95123651525238 4.03299455403701 3.76544150841311 3.22630529727064 3.53019822213631 2.58697675192268 0.227154319206364 0.225699839428942 0.227449267659986 0.22272033410707 0.225117176513162 0.232776943175589 0.233887898381603 0.230097716437424 0.237719495460745 0.235694715618934 0.230032966679664 0.229127548254424 0.226091430269114 0.225049301364556 0.228445731117495 0.225907210665815 0.229588514515280 0.225939117370812 0.229840478657785 5 5|0 +|/ 16259106 16260276 16259768.8 16258296 16260609 + gene protein_coding_gene TRUE TRUE AT5G40550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27460.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA97166.2); similar to Os12g0290600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066601.1); contains InterPro domain Protein of unknown function DUF1325; (InterPro:IPR010750) 0.577912414843002 4.64038958311415 0.000793545866013363 1 5.69970289488562 6.2949003820582 0.577912414843002 0.156128039502724 AT5G58150_at 4.27080460986164 4.40189099028012 4.34743325687156 4.04439548632123 4.21077123599924 4.09410930366114 3.32091569992655 3.94878710283089 4.2346456662028 3.84770943999126 4.14315126133728 4.34273275454044 4.4145273679665 4.46859937360363 4.34469096900147 4.08694654485642 4.33064240195689 3.87167265343311 3.72931352876152 0.258616421082314 0.261939196667195 0.260971751723254 0.261991172714309 0.271278912674348 0.268643059863887 0.259397509370483 0.258518604592267 0.268189976474953 0.259013080460241 0.264932953715392 0.259434277240413 0.263090740093981 0.263633641683205 0.265941272702538 0.258247415858273 0.260807642351206 0.26914690543851 0.259565793117333 5 5 - 23547442 23547945 23547684.364 23547307 23550066 - gene protein_coding_gene TRUE TRUE AT5G58150.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G24230.1); similar to Protein kinase [Medicago truncatula] (GB:ABE85425.1); similar to Protein kinase [Medicago truncatula] (GB:ABE88713.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -0.511325735139105 -4.63950570984817 0.000794658642291595 1 5.69849980414404 8.17368510779679 -0.511325735139105 0.124412707824126 AT5G57150_at 4.58761924932314 5.07234341471445 6.56910804572332 6.54210868593695 6.52941937618832 5.10708714517217 3.46876323515101 3.51632118640196 3.04548112021717 2.82052716379458 4.44950493756757 4.44829948948871 4.66067711199946 4.49381498940518 4.22389823244402 4.02151913244518 3.81050678026777 3.95806738481036 3.05641459863887 0.291093938295721 0.273749671452206 0.302149674823476 0.296242158463443 0.286209890849913 0.311036007674454 0.272844622450621 0.286966811097991 0.283899201411989 0.2904455558103 0.272844622450621 0.277772315591259 0.277910780649916 0.293359688065456 0.282266138325751 0.272844622450621 0.293650770004805 0.277358412559077 0.274360929010198 5 5 + 23169813 23172073 23170490.818 23169412 23172292 + gene protein_coding_gene TRUE TRUE AT5G57150.1|AT5G57150.2|AT5G57150.3 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G29930.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE84573.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092)|similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G29930.3); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE84573.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.828197333975897 4.63754117801492 0.000797137846033827 1 5.69582528167082 8.79030977641995 0.828197333975897 0.260214444740736 AT5G24630_at 3.57516295003256 3.31427061779051 3.80962536631285 3.96616514831159 3.56381549259575 3.73040421255096 3.43933312940269 3.78427532550192 3.77955241375064 2.97518387841286 3.34089113999604 3.50207564817478 3.95982959085857 3.72951478194303 3.52273672771608 2.98489045383863 3.64333988050445 3.83184477163817 3.56482515403544 0.242957988111273 0.242817258995854 0.242817258995854 0.244680002233245 0.245234379855214 0.248546725953727 0.249171972903521 0.247896748257312 0.25220404263676 0.251066179359173 0.251582673681807 0.242817258995854 0.246434803127507 0.253940255484629 0.248422314084802 0.244136518748446 0.242817258995854 0.247844309204717 0.251459585395497 5 5|0 -|/ 8432547 8433726 8433150.571 8432526 8436173 - gene protein_coding_gene TRUE TRUE AT5G24630.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD13052.1); similar to Os02g0147700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045886.1) -0.439712048944253 -4.63385995577297 0.000801805489914471 1 5.69081184763091 7.15000362517904 -0.439712048944253 0.0846565360879457 AT5G62620_at 5.08625951880831 5.26535114753142 7.18135950478628 6.87517316805154 6.09808672369518 5.97953364232956 3.17305062253736 2.90687076871942 3.59436882160402 3.73858949298247 3.58749254603523 3.58771304867763 3.752273435446 3.74458170525511 3.70841847042311 4.14638987196046 3.68520284541371 3.72209229650567 3.50290537602853 0.24518411104694 0.237721344121871 0.25225563238731 0.247352215833941 0.237206059822350 0.239946221284261 0.243997702175452 0.233420215155222 0.237413074830431 0.241103819824094 0.232702835527950 0.232702835527950 0.232702835527950 0.249172830654520 0.237857878241137 0.235335668861027 0.239226998949061 0.240347586687984 0.237412609566441 5 5|0 +|/ 25156140 25156961 25156642.9 25153977 25157148 + gene protein_coding_gene TRUE TRUE AT5G62620.1 galactosyltransferase family protein similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G21060.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G74800.1); similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G27120.1); similar to galactosyltransferase family-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83183.1); similar to galactosyltransferase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99414.1); similar to Glycosyl transferase, family 31; Ar (GB:ABE93312.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Galectin, galactose-binding lectin; (InterPro:IPR001079); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) 0.431417806474099 4.63039779438105 0.00080622170135568 1 5.68609460836968 8.99757318255886 0.431417806474099 0.0794414086954364 AT5G49280_at 1.71660133218044 2.14785437971706 3.43312889596751 3.03140243328077 2.20396251835923 1.96170144424113 2.15526584453953 1.74835424745575 2.02132521451211 2.01824710093490 3.02579576031551 3.19395650146521 2.57029768767129 2.67987985219784 3.15272969962592 2.88955793361313 3.21492299924059 3.35274062674167 2.41590143406308 0.270106232181821 0.271235125203045 0.276107784985383 0.285270370704103 0.2625379374185 0.272566935873646 0.2625379374185 0.276427030485668 0.272289295847769 0.280526268858369 0.2625379374185 0.267293865215785 0.263783392895663 0.264709326792343 0.268786275847131 0.2625379374185 0.279638168119524 0.272778389159870 0.2625379374185 5 5 - 19994068 19994515 19994248 19993820 19994675 - gene protein_coding_gene TRUE TRUE AT5G49280.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G06750.1); similar to OJ1116_C07.3 [Oryza sativa (japonica cultivar-group)] (GB:BAC00686.1); similar to Os01g0309100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042851.1) 0.523140052846786 4.62996665331187 0.00080677344457368 1 5.68550702775181 4.88068874485714 0.523140052846786 0.13084017767022 AT5G45340_at 2.97789774391058 3.44537328341469 3.24863996158981 3.49682791408768 3.70941237896837 3.53540173806419 4.43358837384235 3.71791416750449 4.0143848050603 4.42545454662018 5.1908349603024 5.49502205475466 3.95234301455016 5.31465318634575 4.28078752493857 3.65162686623957 3.49115483547836 5.01821482523528 3.861484056534 0.232527335980133 0.232240457768522 0.242116151718589 0.247865947490468 0.229340801000952 0.234985883582794 0.228862892846223 0.231518480041844 0.243993861658576 0.231062741554395 0.236687340704605 0.23810610400767 0.229266078611834 0.248123566932646 0.228862892846223 0.228862892846223 0.238937165438981 0.228862892846223 0.230064309186660 5 5 - 18386213 18386999 18386451 18385869 18388218 - gene protein_coding_gene TRUE TRUE AT5G45340.1|AT5G45340.2 CYP707A3 (cytochrome P450, family 707, subfamily A, polypeptide 3); oxygen binding Encodes a protein with ABA 8'-hydroxylase activity; involved in ABA catabolism. Mutant analyses show that disruption in the gene results in more drought tolerance whereas overexpression results in increased transpiration rate and reduced drought tolerance. Gene involved in postgermination growth. similar to CYP707A1 (cytochrome P450, family 707, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G19230.1); similar to ABA 8'-hydroxylase CYP707A1 [Solanum tuberosum] (GB:ABA55732.1); similar to (+)-abscisic acid 8'-hydroxylase [Oryza sativa (indica cultivar-group)] (GB:ABI64254.1); similar to abscisic acid 8'-hydroxylase [Phaseolus vulgaris] (GB:ABC86558.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|similar to CYP707A1 (cytochrome P450, family 707, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G19230.2); similar to ABA 8'-hydroxylase CYP707A1 [Solanum tuberosum] (GB:ABA55732.1); similar to abscisic acid 8'-hydroxylase [Phaseolus vulgaris] (GB:ABC86558.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.578303688287887 -4.62893288333126 0.000808098012688678 1 5.68409802317012 7.89551734244881 -0.578303688287887 0.156955897090560 AT5G52100_at 8.44399092073322 8.1714443860505 8.25689153150402 7.86762568809412 9.03038096107 8.55502572302797 9.14434162189332 8.45961697668289 8.7644764284024 8.67084003426957 9.41980934372414 9.54349701115583 9.07922345417321 9.41035498113704 9.6273957710670 9.35109887434495 9.00123172434157 9.17473494852914 8.92023703868612 0.146973601872665 0.149952505399169 0.144713820976029 0.163965123109714 0.156344539392755 0.151276560596112 0.150215200343084 0.160797122977975 0.163692345533975 0.15167001968866 0.14436225789324 0.147713335792402 0.149215194726849 0.147796613766327 0.160336032781099 0.145110841959005 0.162140091768702 0.157917266488064 0.148210862378335 5 5|0 +|/ 21188011 21189152 21188577.667 21187371 21189572 + gene protein_coding_gene TRUE TRUE AT5G52100.1 dihydrodipicolinate reductase family protein similar to dihydrodipicolinate reductase [Medicago truncatula] (GB:ABE86300.1); contains InterPro domain Dihydrodipicolinate reductase; (InterPro:IPR000846); contains InterPro domain Dihydrodipicolinate reductase, bacterial; (InterPro:IPR011770) -0.598293472510032 -4.62726261296158 0.00081024297993021 1 5.68182109223537 17.5467161081379 -0.598293472510032 0.166044119496329 AT5G25580_at 1.70092484747637 1.37740351003504 2.17678693214065 2.11078463687432 1.58714311468599 1.66711999220231 1.48690854860993 1.26084930064662 1.58822798468923 1.14193152779777 1.96622853496264 2.73279634132939 2.04434764942875 2.01407626063535 1.94100930899874 2.22888048426604 2.06649929701501 1.71825217226745 1.54443784921053 0.184123893775687 0.184101375069269 0.189663241147951 0.18132757462445 0.188736434957530 0.189389648620372 0.190440868838354 0.181365292290436 0.184030904116259 0.186229568759302 0.194679958821087 0.186723969168657 0.185937916500466 0.184181364683804 0.180546444566828 0.180931606466097 0.193550497063404 0.19119967415192 0.184350818533222 5 5|0 +|/ 8904971 8906086 8905564.222 8903508 8906314 + gene protein_coding_gene TRUE TRUE AT5G25580.1 similar to aminoacyl-tRNA synthetase family [Arabidopsis thaliana] (TAIR:AT1G18950.1); similar to hypothetical protein MtrDRAFT_AC130799g7v1 [Medicago truncatula] (GB:ABE83622.1); contains InterPro domain B repeat unit of collagen binding surface protein (cna); (InterPro:IPR008970) 0.418189098615195 4.62368868160717 0.00081485284413146 1 5.67694744746876 3.42792863200662 0.418189098615195 0.0706184841722013 AT5G44510_at 5.09599372064138 4.64124254944892 5.67712976257457 5.56552674708938 5.43861203257627 4.93224914966575 5.0529810895194 4.97213140766325 4.79191785810402 5.03425920573883 5.44047151879081 5.69537754511347 5.57395844020272 5.41415127351040 5.18482411031358 5.5786518879387 5.28718278780931 5.05176886684744 5.07943054560818 0.225210601727406 0.218604872640467 0.229518962426569 0.219381764307632 0.214637682533965 0.219321604406543 0.221875123215356 0.219886619179687 0.235461302858696 0.226658019917020 0.214203409387621 0.220382727298071 0.218167563672512 0.224659061761199 0.226796314973728 0.224767674508913 0.234246429728026 0.223323085168512 0.226816902178662 5 5|0 -|/ 17946914 17948123 17947811.75 17946900 17951415 - gene protein_coding_gene TRUE TRUE AT5G44510.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) [Arabidopsis thaliana] (TAIR:AT3G44480.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.501081762063985 -4.62181326067409 0.000817282936108208 1 5.6743891174842 10.3579003942138 -0.501081762063985 0.120169475178524 AT5G44680_at 9.26821436327106 9.17833484170604 8.93826477401228 8.87956628683221 10.0352888824179 9.58850677267044 9.69071866165406 9.34476286264358 9.93146786526034 9.4188456981294 10.7881087714847 10.6461504428828 10.4940374423778 10.6111516046457 10.436997078999 10.3772391137613 9.431191672085 10.0518360231351 10.3165484832476 0.0983067886973697 0.0973252408288445 0.102608027159272 0.101441106558264 0.0963173924020002 0.099625120646095 0.0973483014447778 0.098292507820044 0.103512924363896 0.0966755601343843 0.0966845932802527 0.0945639155470609 0.0941092114795541 0.0941092114795541 0.0980242467326252 0.0941092114795541 0.101147617787054 0.106370057066918 0.0984323755343784 5 5 - 18041689 18042481 18041985.455 18041442 18043218 - gene protein_coding_gene TRUE TRUE AT5G44680.1 methyladenine glycosylase family protein similar to methyladenine glycosylase family protein [Arabidopsis thaliana] (TAIR:AT3G12710.1); similar to Methyladenine glycosylase [Medicago truncatula] (GB:ABE81339.1); contains InterPro domain Methyladenine glycosylase; (InterPro:IPR005019); contains InterPro domain DNA glycosylase; (InterPro:IPR011257) -0.463052780370922 -4.62119435588138 0.00081808656440257 1 5.67354471338589 19.4872286977595 -0.463052780370922 0.0995362993409655 AT5G62440_at 5.84150590718666 5.58169764071786 6.54106827780696 6.13402371979242 6.08352078477617 5.85671701053643 6.51743119320896 5.87492660362266 4.21030428235149 4.55399236731853 5.25364835352497 5.46343273754540 5.3436711046633 5.05426136350045 5.22557260964463 5.24649205172628 5.35091878522813 4.93798940923755 4.949701468832 0.171918189290487 0.168967141723881 0.175394775892749 0.172617279138929 0.170276630224506 0.171854322370203 0.174407385501498 0.178125516398237 0.183700163449987 0.171440456572449 0.170735500618136 0.170014212899483 0.170775081356100 0.167461475287605 0.167990907781283 0.171202234803194 0.175111139661998 0.170063036767829 0.172503525588833 5 5 - 25089917 25091098 25090433.8 25089694 25091215 - gene protein_coding_gene TRUE TRUE AT5G62440.1 similar to defective chloroplasts and leaves protein-related / DCL protein-related [Arabidopsis thaliana] (TAIR:AT1G45230.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94367.1); similar to Os03g0187000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049206.1) -0.550013562313223 -4.61706254958856 0.000823472994608469 1 5.66790577712892 10.9567768962316 -0.550013562313223 0.144522684499444 AT5G63000_at 5.78306951848429 5.75253139927601 6.41869280870987 6.17338179796031 6.51378563146492 6.19384619515736 5.82045906996154 5.73325132885356 5.46734873793802 5.58917066710776 5.8730727935031 6.55270670320395 6.11489565769374 6.27264977801996 6.42831694835164 5.96434216784894 5.60749727286893 6.07255514307682 5.31018250553197 0.170227956079086 0.167723454551374 0.171451903011854 0.172565887968489 0.162357815598198 0.171131741329256 0.162314080798079 0.164786166086711 0.173959764127658 0.168327284997589 0.163672971723714 0.164216850118566 0.16499919985041 0.167111429990158 0.161530925596128 0.161530925596128 0.179451914013438 0.162046652560272 0.172460967752221 5 5|0 -|/ 25297395 25297958 25297682.333 25297238 25298759 - gene protein_coding_gene TRUE TRUE AT5G63000.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57827.1); similar to Os01g0271000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042705.1) -0.418829411554479 -4.61624023315375 0.000824549465653617 1 5.66678315792275 11.8317881495319 -0.418829411554479 0.0715778235038319 AT5G64920_at 6.89640170417764 7.04562749226635 7.48557892634496 7.01922511624326 7.79514285647413 7.47108623590097 6.87551878889543 6.4497748782597 7.31793594291425 7.6369725703237 8.32076693387777 8.20309889943056 7.69763248877907 7.84136822012 8.05569462890883 8.19222761744346 7.36392330078744 7.61690765683916 7.78101021091224 0.177886871219689 0.169683922599073 0.170105026357252 0.175003484412816 0.167451977863283 0.174947941161518 0.175307495907301 0.180721832435166 0.182051441083627 0.177235137350898 0.168027306643698 0.169662550904678 0.171113705912047 0.179763350748366 0.180670772776088 0.167451977863283 0.178315313999810 0.180364060044713 0.168350443948726 5 5 - 25961601 25962088 25961840.818 25961114 25962668 - gene protein_coding_gene TRUE TRUE AT5G64920.1 CIP8 (COP1-INTERACTING PROTEIN 8); protein binding / zinc ion binding Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5. Identical to E3 ubiquitin-protein ligase CIP8 (EC 6.3.2.-) (COP1-interacting protein 8) (CIP8) [Arabidopsis Thaliana] (GB:Q9SPL2); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G13430.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.510629338615964 -4.61349825388903 0.000828149655656158 1 5.66303898723976 14.8748405213153 -0.510629338615964 0.125512335489898 AT5G06240_at 5.36002038942028 5.71806286628087 6.4178354080059 6.5740955834032 6.9081874888543 6.79529553161337 4.257770372263 4.42339309932599 4.59823560919012 3.82949216114741 5.27640760053314 5.23541495030121 5.50303149510625 5.43015073654425 4.8682372518239 5.37199961469821 5.70591862797412 4.59093978240394 4.21432201348071 0.239732426831148 0.226799897298879 0.241450354982055 0.234683594357106 0.231647605516095 0.237931337692949 0.23509197581878 0.231786776834707 0.234292166816916 0.232716742021192 0.227513880837469 0.223304404251258 0.228272330702285 0.228669190295309 0.230022570601259 0.223304404251258 0.227360852777927 0.234418092859783 0.235949760700606 5 5 + 1888406 1889461 1888948.182 1888312 1889699 + gene protein_coding_gene TRUE TRUE AT5G06240.1 EMB2735 (EMBRYO DEFECTIVE 2735) similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS75234.1) 0.423892587508967 4.6038173779394 0.000840993767956712 1 5.64980937217533 10.5377221434105 0.423892587508967 0.0759840324317633 AT5G24500_at 6.7209260538962 6.92826470075529 8.06971573347807 7.9784820966658 8.50029420576803 8.24057165834453 6.61871558587442 6.38410797697987 7.20357233355853 6.18969707799985 8.29838596883788 8.17683814247423 8.14545056427437 8.06396700436822 7.70507656827503 8.14120323100962 7.63485480887623 7.51462233416384 6.58960366210068 0.225134017703701 0.230799692745279 0.229848667947569 0.230154329667644 0.232052751049881 0.226233194887983 0.237040806795987 0.23192445804526 0.234175942865519 0.254322049258398 0.225134017703701 0.225134017703701 0.228361749650376 0.231940390515263 0.237656169281569 0.225134017703701 0.243524743433197 0.243549479313833 0.23462974228724 5 5|0 -|/ 8368088 8368341 8368255.556 8367305 8368739 - gene protein_coding_gene TRUE TRUE AT5G24500.1 similar to Os06g0316100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057496.1) 0.418348513359927 4.60229871464831 0.000843027651029935 1 5.64773254145312 14.7406385109726 0.418348513359927 0.0721472806740472 AT5G63980_at 9.75148938975282 9.9131522739554 10.1163832888042 10.1515557075438 9.8880664824074 9.81177254372419 9.74822802633973 9.672984050063 7.76962659242739 8.81260113566115 10.2882455944029 10.5850008378366 10.0678689455261 10.2128377798078 10.3508374579994 10.0952378150285 10.0747015147000 10.2025282837905 8.2666605649089 0.106800338911518 0.106800338911518 0.108966482468749 0.10774479383754 0.109780737298520 0.108054497398338 0.109712701449310 0.109724032072119 0.157243860639042 0.116575951141867 0.111196654869027 0.108134834222097 0.109113735074472 0.110375109413485 0.111072836778948 0.107993889632146 0.110384649140569 0.106800338911518 0.131397424291784 5 5 + 25628259 25628981 25628549.909 25627038 25629159 + gene protein_coding_gene TRUE TRUE AT5G63980.1 SAL1 (FIERY1); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought, and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Identical to SAL1 phosphatase (3'(2'),5'-bisphosphate nucleotidase 1) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 1) (DPNPase 1) (Inositol-1,4-bisphosphate 1-phosphatase 1) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 1) (IPPase 1) (FIERY1 protein) (SAL1) [Arabidopsis Thaliana] (GB:Q42546); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.37738641126907 4.59854988961141 0.00084807054410959 1 5.6426041754963 19.1405139918083 0.37738641126907 0.0341117073647459 AT5G57290_at 8.62369425522923 8.60863794116962 8.9342861492502 8.62686097777877 8.68073201758436 8.44010864442842 8.47062522430685 8.77586295191556 8.27739203746461 8.36531917185442 9.08300625462596 9.46470244485593 8.75819499061072 8.85620970602878 9.66715036382655 8.76702276290132 8.64152002875141 8.62103668647165 8.14019067121757 0.143650429006642 0.142447756717405 0.135241726138831 0.128899549379930 0.131509447707997 0.146497912685782 0.135210665336694 0.135330434899282 0.148067951377559 0.136602092661240 0.130660399714186 0.130644676268855 0.132694507349468 0.128600942802618 0.142806672301549 0.132643148739582 0.135808628159153 0.136696953784996 0.138210067393715 5 5 - 23224283 23225037 23224678.727 23224028 23225152 - gene protein_coding_gene TRUE TRUE AT5G57290.1 60S acidic ribosomal protein P3 (RPP3B) Identical to 60S acidic ribosomal protein P3-2 (RPP3B) [Arabidopsis Thaliana] (GB:Q9LVC9); similar to 60S acidic ribosomal protein P3 (RPP3A) [Arabidopsis thaliana] (TAIR:AT4G25890.1); similar to Os06g0701400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058484.1); similar to 60S acidic ribosomal protein P3 [Lactuca saligna] (GB:AAR22559.1); similar to 60S acidic ribosomal protein P3 [Lactuca saligna] (GB:AAR22560.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) -0.437909527779553 -4.5961205194013 0.000851355500916065 1 5.63927952052871 17.2667623693435 -0.437909527779553 0.0857985767593288 AT5G26731_at 2.06088198797882 2.65593589079306 2.97068386625087 3.03088252681476 3.20422670290561 2.56546419603271 1.04595523031924 1.42821890997181 1.58417250455409 1.16606551809967 1.60010651281692 1.73019068456440 1.50168103431241 1.22510458465658 1.67076866057688 1.15746727855589 1.8910071022644 1.44147649389961 0.819677535287739 0.247215356055480 0.251479981234695 0.249924167434719 0.267509030445008 0.259690146376335 0.252576280369723 0.244622301989957 0.248509192400898 0.244622301989957 0.248268472245177 0.247351801804613 0.252459639187201 0.246880756960466 0.244622301989957 0.250892546974403 0.244622301989957 0.257177634879881 0.247360312222925 0.250126532194856 5 5 + 9295701 9295953 9295850.364 9295577 9296383 + gene protein_coding_gene TRUE TRUE AT5G26731.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05937.1); similar to At5g26741/At5g26741 [Medicago truncatula] (GB:ABE81791.1) 0.592424408811213 4.59552821713268 0.000852158436258268 1 5.63846878557156 3.72887973718488 0.592424408811213 0.165251898942666 AT5G19800_at 1.54680428610558 1.36228969790730 1.53361066985888 1.46961111780623 1.12618338127882 1.1568069802633 1.51521998210783 1.60399074897866 2.0308236440109 2.06087173016187 1.66668247957522 1.81818229040767 1.66338594762783 1.59954118200161 1.52388265855008 1.63847479606956 2.32276985271559 2.18069551904359 2.28342414855693 0.186243713024842 0.185415716443205 0.188910630554354 0.190272691548206 0.185109766930879 0.187326048544461 0.194418704093511 0.193718390282727 0.194202150276050 0.184639969848147 0.184839054149472 0.192572421605944 0.184743589175684 0.182527776585757 0.18818970617191 0.186912431813235 0.18344612626945 0.183476979015339 0.187985722590068 5 5 + 6690654 6690913 6690769.182 6690650 6690940 + gene protein_coding_gene TRUE TRUE AT5G19800.1 hydroxyproline-rich glycoprotein family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G20850.1); similar to C2 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94080.2); contains InterPro domain Glutelin; (InterPro:IPR000480) -0.379633974699502 -4.59474100780906 0.000853226827563522 1 5.63739117103576 3.37768544886772 -0.379633974699502 0.0375012410400528 AT5G19860_at 10.4682971576614 10.6884995116371 11.3304393659931 11.4511412368829 11.4780286902533 11.3262887864219 10.0270473530219 10.3586243565571 9.979038524285 10.2758205328866 11.3079439255770 11.0590669779231 11.3354444414405 11.2617893665138 11.0724923261197 11.4917766206417 11.1001892009403 11.0990176946383 10.3032300311871 0.0921141707429839 0.0915726293097819 0.0932836797852582 0.0931070646342836 0.093526851747978 0.101637416350427 0.0915726293097819 0.0973861062340757 0.0991646523765542 0.095313845809538 0.0918593924710922 0.0926000497568428 0.0932396167315579 0.0937863347761873 0.0956089176833072 0.0915726293097819 0.0988921316606064 0.0975048160564364 0.0973813858285337 5 5 - 6715361 6715635 6715499.364 6714266 6715877 - gene protein_coding_gene TRUE TRUE AT5G19860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55265.1); similar to Protein of unknown function DUF538 [Medicago truncatula] (GB:ABE78677.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.423657434122546 4.591343524973 0.000857854085607711 1 5.63273911623241 21.5920431899755 0.423657434122546 0.0766197107547688 AT5G07060_at 1.46158062602126 1.50346168112407 2.21801111135375 2.48482220572411 1.91573214715096 2.89761898026153 1.19034608373236 1.23191980879102 1.47339610067263 1.40048414632142 2.08164519824403 1.74113076757562 2.42716853576373 1.84123896989947 1.71245570949146 1.77979503131224 1.48511144876184 1.74943275594416 1.29238523810084 0.174787667908443 0.176103732422833 0.178195088675154 0.17764741281329 0.175376547063273 0.184393048808945 0.175594152905142 0.173336222161879 0.181069491287640 0.174234281311210 0.179123792005969 0.173336222161879 0.176352856542529 0.178078605726944 0.177561607204137 0.177196512501934 0.193287778390597 0.177082839384631 0.174490896379945 5 5 - 2194465 2195051 2194681.909 2194395 2195873 - gene protein_coding_gene TRUE TRUE AT5G07060.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT1G07360.1); similar to U2 auxiliary factor small subunit [Medicago truncatula] (GB:ABE89510.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.615844981119334 4.58317590170249 0.000869086754415198 1 5.62154734339153 3.48343781243106 0.615844981119334 0.176377624971815 AT5G17710_at 8.54350151295766 8.61650091611712 9.01350199938972 8.97661329353305 9.11552758221744 8.89577691774874 9.04977759196823 9.2780252548694 9.01309665516064 9.21141339896547 9.68405518397586 10.0049496543909 9.52071733621293 9.62910646510371 9.95781836354912 9.7995086251686 9.33144633694725 9.45707634388386 9.03619889905001 0.121517104076950 0.118341959798461 0.126407832041735 0.119581207194244 0.122349405063644 0.128669230122558 0.123937052745498 0.120270667693622 0.127927154043823 0.12719333749547 0.119594860747918 0.118112395182193 0.126089615331376 0.119892747264247 0.119874635557584 0.119284808473813 0.126069120654223 0.122342327418545 0.128683017970968 5 5 - 5839585 5840604 5840155.364 5839345 5841726 - gene protein_coding_gene TRUE TRUE AT5G17710.1|AT5G17710.2 EMB1241 (EMBRYO DEFECTIVE 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization similar to co-chaperone grpE family protein [Arabidopsis thaliana] (TAIR:AT1G36390.2); similar to Molecular chaperone of the GrpE family (ISS) [Ostreococcus tauri] (GB:CAL54976.1); similar to Os04g0431100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052822.1); similar to Os02g0612000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047409.1); contains InterPro domain GrpE protein, head; (InterPro:IPR009012); contains InterPro domain GrpE protein; (InterPro:IPR000740) -0.397001309406148 -4.58195337039543 0.000870781364230851 1 5.61987116932083 18.3161470201232 -0.397001309406148 0.0566280342226663 AT5G13560_at 5.71689197871885 6.22578378463488 7.02538390915549 6.85669179009884 6.75551838674892 7.28135166118976 5.04902586000312 5.15798135886417 5.2494214086975 5.27472889613409 7.09473917941444 7.19900626823072 7.01735754699899 6.72825564589995 6.82875178429751 7.25181083194904 7.22460126849657 6.10219036949094 5.24273066355679 0.193151484918074 0.189952207129385 0.19023568731534 0.190687118234783 0.187655667078621 0.189594309220718 0.191833219981163 0.194544408983161 0.218250149617460 0.194258334688737 0.192257882268153 0.189194161353300 0.200397250064873 0.194066236702519 0.188398067640865 0.193672972460020 0.19197509079064 0.195628818118577 0.197304128201151 5 0|5 /|- 4361628 4362063 4361805.222 4360634 4366451 - gene protein_coding_gene TRUE TRUE AT5G13560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37370.1); similar to Os03g0281300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049742.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07652.1) 0.518519447926723 4.58061309385470 0.00087264319150301 1 5.61803326316847 12.3518116418318 0.518519447926723 0.131316432548778 AT5G07130_at 4.35031587858276 4.59457298265191 4.72960888606968 4.33120147947607 3.77115983063320 3.76887165550525 3.05196140726819 3.05669083702687 4.45880023142156 3.47609594639317 4.29225049886362 4.44392196408089 3.92992919247937 4.29133771825334 4.63279803401766 4.18159984166854 4.23575960741526 4.63866187501658 4.23336999530947 0.213154617411920 0.215819911263077 0.211431815934728 0.208556794312543 0.227278696630835 0.21232349625841 0.223356050630662 0.209061972214915 0.211487629882777 0.211482864551207 0.207520184160834 0.210789212281789 0.212477629948686 0.209632950472965 0.204566288327436 0.204566288327436 0.209799547605498 0.206332044161563 0.21249877792963 5 5 + 2211955 2212480 2212171.545 2210570 2212621 + gene protein_coding_gene TRUE TRUE AT5G07130.1 LAC13 (laccase 13); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to LAC3 (laccase 3), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G30210.1); similar to LAC12 (laccase 12), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G05390.1); similar to LAC5 (laccase 5), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G40370.1); similar to laccase [Populus trichocarpa] (GB:CAA74104.1); similar to diphenol oxidase laccase [Glycine max] (GB:AAM54731.1); similar to laccase-like multicopper oxidase 151 [Arabis procurrens] (GB:AAT75356.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.42877537492679 -4.57913946042155 0.000874695116192718 1 5.61601212977848 8.15023340257632 -0.42877537492679 0.0808773887838512 AT5G04200_at 0.665295347015492 0.729336371844209 0.725405887128789 1.01614147826866 1.26882771169592 0.927609560109869 0.757387422033016 0.704072317284387 1.13566953717825 0.98976298436998 1.59479489284949 1.91808971113165 1.43604970620273 1.66685228936454 1.83023280440761 1.75849922700148 1.43908235326811 1.76405345027469 0.738767176545868 0.194818259945953 0.195746481120891 0.194818259945953 0.200232367946000 0.194818259945953 0.210081767081030 0.194818259945953 0.210167462647747 0.207150121967869 0.210199847902284 0.195661750330789 0.198394504463138 0.210968292451323 0.198475459337118 0.202141690999063 0.207551840161210 0.204605384938359 0.204588892092612 0.197907980776854 5 5 + 1154302 1154837 1154508.818 1153791 1155041 + gene protein_coding_gene TRUE TRUE AT5G04200.1 latex-abundant protein, putative (AMC9) / caspase family protein similar to latex abundant protein, putative (AMC5) / caspase family protein [Arabidopsis thaliana] (TAIR:AT1G79320.1); similar to Peptidase C14, caspase catalytic subunit p20 [Medicago truncatula] (GB:ABD28668.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600) 0.425053950080296 4.5705361728107 0.000886776557057592 1 5.60420500992211 2.16460453042783 0.425053950080296 0.0789062403152022 AT5G62680_at 9.67503316776413 9.8682968953358 10.865463513 11.0244462208808 10.2539588805276 9.93567400942664 9.195673937292 9.42715670657077 8.3139594499625 8.71877716585684 9.85705588361073 9.40464499790532 9.54713515566533 9.50385716882279 9.43215739474425 9.74963607407262 10.1504653061879 9.9624868815043 8.16817367839523 0.124023696971052 0.113150646150493 0.116012378763927 0.118621274321287 0.117000653241466 0.122388214299105 0.123695068792266 0.116746240032222 0.145255493297785 0.117622223558337 0.113150646150493 0.117435203396841 0.113150646150493 0.114795808088308 0.129242125530328 0.113150646150493 0.130702320127114 0.118072427074157 0.137695754922981 5 5 - 25182773 25183200 25182987.364 25182363 25185169 - gene protein_coding_gene TRUE TRUE AT5G62680.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G18880.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G47960.1); similar to nitrate transporter NRT1-1 [Glycine max] (GB:BAB19756.1); similar to nitrate transporter NRT1-5 [Glycine max] (GB:BAB19760.1); similar to nitrate transporter NRT1-2 [Glycine max] (GB:BAB19757.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.427662532494209 4.56991598234583 0.000887654251965121 1 5.60335337172472 19.0813295609592 0.427662532494209 0.0807102725193128 AT5G28740_at 7.2188579008232 7.10459604381599 7.67377084965268 8.00386138173697 7.53058813382768 7.50512235793517 7.18591972684345 7.29735210259992 6.98048616877913 6.55653913739059 7.47673653858171 7.84367879006212 7.0960376049253 7.33984213887593 7.92240031697073 7.61926283183624 7.36585768028541 7.59607961653972 6.87778193024744 0.161912185196324 0.172940352927324 0.165407897485768 0.162317606659482 0.164827027879835 0.169595785922004 0.164949803091407 0.159387460377426 0.172806445694334 0.167581659527079 0.159691979451485 0.161754473550497 0.162285477463378 0.168772346544404 0.160773439751256 0.161583503098805 0.162343539141373 0.156785384886541 0.156956324081052 5 5|0 +|/ 10783094 10783711 10783338.333 10780778 10783915 + gene protein_coding_gene TRUE TRUE AT5G28740.1 transcription-coupled DNA repair protein-related similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT5G45990.1); similar to XPA binding protein 2 [Danio rerio] (GB:NP_955466.1); similar to hypothetical protein LOC555321 [Danio rerio] (GB:NP_001038248.1); similar to Xab2 protein [Danio rerio] (GB:AAH56771.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.404043542578832 -4.56777399574645 0.000890692647760225 1 5.60041151345672 14.6087199047704 -0.404043542578832 0.0636034658147348 AT5G37130_at 5.47413892034146 5.1977155740551 6.00807638756448 5.86124563793868 5.77602723940051 5.55711383153262 4.93713387643488 4.96829694140932 5.27071314525505 5.59199733277966 5.93801262570845 5.97074711737987 5.82270517139471 5.98466190332652 5.98211149836777 6.06958482948003 6.08406043009352 5.71882917692112 5.43957710961564 0.176847136634686 0.174929288552723 0.179592034982660 0.176981887031753 0.172835763136011 0.176222526126731 0.18474699403449 0.171184189931998 0.182123976699128 0.172316634176404 0.179562152880865 0.174855362004966 0.171116434436566 0.171116434436566 0.180124023618662 0.174881379043633 0.172858967895229 0.177415437966521 0.171116434436566 5 5|0 +|/ 14703032 14703656 14703307.625 14698608 14703914 + gene protein_coding_gene TRUE TRUE AT5G37130.1 similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G17270.1); similar to Os07g0455100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059558.1); similar to tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC65407.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105) -0.407183663942251 -4.56452909468492 0.000895316428260795 1 5.59595338540522 11.1626860294017 -0.407183663942251 0.0663193141716438 AT5G12900_at 2.87791936089423 2.85036394824299 2.16524306030381 2.56548063121862 3.77619229674069 3.34929199873787 2.76782129296156 2.71459199982577 4.03276906241643 3.43808444490673 4.37924717528305 4.42841296936496 4.28027178588646 3.78470485232857 3.80740175605705 3.64689438923675 3.01208840261828 3.48127868939027 4.03830198227345 0.201013919500991 0.198045559674910 0.203826636630933 0.204365754134448 0.200349463564340 0.20304310041319 0.196655071946261 0.195780431434602 0.199642646698931 0.196472667022060 0.195780431434602 0.195780431434602 0.196577488027732 0.205760469603641 0.205158122663137 0.196351288650697 0.205191476614140 0.198320642689929 0.199881641156442 5 5 - 4072211 4072710 4072452.182 4071922 4074622 - gene protein_coding_gene TRUE TRUE AT5G12900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12330.1); similar to Os08g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062195.1); similar to Peptidase M14, carboxypeptidase A [Medicago truncatula] (GB:ABE94280.1); similar to Os09g0488800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063532.1) -0.461145083252691 -4.56320856491814 0.000897205339406394 1 5.59413860953008 6.72782440647546 -0.461145083252691 0.101797725220155 AT5G39880_at 1.07137679484465 0.650115896673626 0.874447314967758 1.05799844798038 1.14039053979065 0.97217200110149 1.26703732941176 1.16600377213908 3.21439758945205 1.37617831669857 1.28314694706266 1.01063284618451 1.26080057764068 1.46360554345797 0.822865247435536 1.07212795111175 1.58626826117601 1.54736777458387 1.18672408047247 0.199541027854362 0.195908337908796 0.197758376794261 0.197750113415535 0.192559111852591 0.192800195848902 0.197939430553430 0.196523719172484 0.219536275977639 0.19325465486157 0.192559111852591 0.192559111852591 0.201669146117899 0.205177155105813 0.196211316184765 0.200432166520284 0.195140181850149 0.198238766379253 0.202265593473683 5 5 + 15988790 15989232 15989031.091 15988115 15989465 + gene protein_coding_gene TRUE TRUE AT5G39880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28750.1) -0.435495625805761 -4.559849974189 0.00090202848978134 1 5.58952162308947 2.61575204000833 -0.435495625805761 0.0864679571090256 AT5G20240_at 1.78792048789207 1.79192429937098 1.99994865992256 1.93360487983274 1.62421572635610 1.99755430008178 3.10107245164037 2.94494056410823 1.92655740731658 1.61114966731110 1.79134769726755 1.27575746464570 1.65390755465023 1.68237583784993 1.84030023320782 1.75878903834068 2.07225200370456 1.89837977977393 1.66553834729343 0.216689945948475 0.215210873716861 0.222813821532743 0.218526468250250 0.215210873716861 0.215210873716861 0.238001079687122 0.250493160659877 0.228323691703295 0.217942567914700 0.217424445830043 0.217036921173084 0.217376286082409 0.226230293843019 0.218931416922313 0.215210873716861 0.222498963046904 0.219586846691863 0.216693544329168 5 5|0 +|/ 6829327 6831186 6830351 6829044 6831517 + gene protein_coding_gene TRUE TRUE AT5G20240.1 PI (PISTILLATA); DNA binding / transcription factor Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities. Identical to Floral homeotic protein PISTILLATA (Transcription factor PI) (PI) [Arabidopsis Thaliana] (GB:P48007;GB:Q9SQ07;GB:Q9SQ08;GB:Q9SQ09;GB:Q9SQ10;GB:Q9SQ11;GB:Q9SQ12;GB:Q9SQ13); similar to AGL18 (AGAMOUS-LIKE 18), transcription factor [Arabidopsis thaliana] (TAIR:AT3G57390.1); similar to PISTILLATA [Brassica juncea] (GB:AAY63867.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Moesin; (InterPro:IPR008954); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.412757610285029 -4.5584182586771 0.000904092827534873 1 5.5875528852622 3.88817459206081 -0.412757610285029 0.070968530710923 AT5G65810_at 6.94620939870096 6.94663045236596 6.53942876507708 6.4897214964105 7.57666405833153 7.2792426784578 7.83908865401649 7.11331402469748 7.27515407205757 7.28647104761829 8.82484647924265 8.8726671818339 8.23073501435667 8.48488605548356 8.79820264837223 8.12035683003769 7.89365836435208 8.42051262668203 7.33234871896775 0.178658435769204 0.172786317143034 0.18473272403789 0.186075426347251 0.172786317143034 0.185110963543190 0.180713946692104 0.175507425003432 0.183620128511089 0.189339353933203 0.176617038026571 0.185906943160054 0.186183883698221 0.192847677197097 0.181017052844082 0.177714174415091 0.179590611868743 0.187374399656603 0.183686003388205 5 5 - 26355074 26355770 26355492.455 26354895 26356965 - gene protein_coding_gene TRUE TRUE AT5G65810.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49720.2); similar to Os01g0144000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042001.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78370.1); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) -0.525232941246102 -4.55638847298283 0.000907028040702256 1 5.58476114530203 14.9681496558037 -0.525232941246102 0.136008115907085 AT5G54250_at 6.62458879974193 6.83383817903195 7.48051445943309 7.57893944265116 7.86290168168215 7.51313942750704 7.25722380599005 7.49008926945219 6.98396249383183 6.9269660377055 7.5827344365337 7.26758423968944 7.44249813963713 7.5566138799328 7.34121314905296 7.53929521259176 7.67531385829361 7.42968060209125 6.70700650478759 0.165673003488884 0.167697187704595 0.186247639657702 0.173460413465368 0.164507473462705 0.173290380965956 0.161786819892892 0.161152423047081 0.177606237844471 0.164640514602967 0.165521318670056 0.165032297924535 0.16240112760646 0.170124008192217 0.172067729550179 0.159457638131163 0.165404227683155 0.166036053623185 0.174282855188529 5 5 - 22042942 22043909 22043383.273 22042512 22047286 - gene protein_coding_gene TRUE TRUE AT5G54250.1|AT5G54250.2 ATCNGC4 (DEFENSE, NO DEATH 2); calmodulin binding / cation channel/ cyclic nucleotide binding member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. Identical to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic nucleotide- and calmodulin-regulated ion channel 4) (AtHLM1) (CNGC4) [Arabidopsis Thaliana] (GB:Q94AS9;GB:Q9XFS2); similar to DND1 (DEFENSE NO DEATH 1), calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G15410.1); similar to IQ calmodulin-binding re (GB:ABE84248.1); similar to cyclic nucleotide-gated ion channel 4 [Hordeum vulgare subsp. vulgare] (GB:AAY58304.1); similar to putative cyclic nucleotide and calmodulin-regulated ion channel [Oryza sativa (japonica cultivar-group)] (GB:BAD53284.1); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595) -0.429778861550501 -4.55581894652827 0.000907853419710192 1 5.58397769951437 14.5061602341043 -0.429778861550501 0.0830000077434596 AT5G38170_at 2.85881392776056 2.88982178013116 3.29042608687192 3.91973251799477 2.43857002008616 2.39650680834360 2.76089330199132 2.95316834053048 2.84582526568585 2.77684005152903 2.42152240043274 2.29319031931742 2.40997048392009 2.54152877711174 2.30017270738344 2.79792013592248 2.85727194332664 2.76963063655779 3.08834533732174 0.188596155009566 0.190790105911279 0.184764938570397 0.197735759479812 0.186696981955839 0.185903425704802 0.188592347038658 0.184969824645623 0.191281451423919 0.187180661749728 0.189865703645297 0.186895785707655 0.184726499568412 0.181615734973368 0.184145765976662 0.182906731610391 0.186971758759160 0.189936166351333 0.186902155715486 5 5 + 15244957 15245224 15245064.091 15244868 15245311 + gene protein_coding_gene TRUE TRUE AT5G38170.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38160.1); similar to lipid transfer-like protein [Brassica napus var. napus] (GB:AAS68185.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.482137961545623 -4.55007007894443 0.000916229364927375 1 5.57606639604528 5.66477716980145 -0.482137961545623 0.11423273674016 AT5G24300_at 9.48723340483958 9.48403963315882 9.53874332879863 9.5296456043606 9.8012578560813 9.65636721558784 10.0274919562129 9.97309172567322 9.5851221599656 10.0022808058643 10.6069614473321 10.6805002460011 10.4477134537191 10.6251611214740 10.6758628302341 10.7740819033818 10.2947717308422 10.6264936491630 10.0473221904502 0.0807856964974397 0.0802504520303255 0.0815260217431578 0.0814018849386212 0.083188341370355 0.0826521338374462 0.079255097206258 0.0795934523285207 0.0962468778592988 0.0820093260881392 0.0817152999479766 0.0789400565927885 0.0791263254896218 0.081568691182081 0.0801941316854208 0.0774657348417311 0.0818988162692014 0.0829928220492385 0.083319874355161 5 5|0 +|/ 8269566 8270827 8270434.75 8266801 8271199 + gene protein_coding_gene TRUE TRUE AT5G24300.1 SSI (STARCH SYNTHASE I); transferase, transferring glycosyl groups SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch. Identical to Soluble starch synthase, chloroplast precursor (EC 2.4.1.21) (SSS) [Arabidopsis Thaliana] (GB:Q9FNF2;GB:Q9SEI7); similar to glycogen synthase, putative [Arabidopsis thaliana] (TAIR:AT3G01180.1); similar to Soluble starch synthase 1, chloroplast precursor (SS I) (Soluble starch synthase I) (GB:P93568); similar to starch synthase I precursor [Phaseolus vulgaris] (GB:BAD18845.1); similar to soluble starch synthase I [Colocasia esculenta] (GB:AAN37578.1); contains InterPro domain Starch synthase catalytic region; (InterPro:IPR013534); contains InterPro domain Glycogen/starch synthases, ADP-glucose type; (InterPro:IPR011835); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) -0.368637430309557 -4.54891840125585 0.000917917100816344 1 5.57448083504743 19.9220763488533 -0.368637430309557 0.0268349989547468 AT5G64990_at 1.53540639864478 1.67731190111351 2.3239585239646 2.74248981801805 2.02814753007978 2.43355219022993 1.04551734627545 1.2020064740564 1.24587016376975 1.46596938861961 1.21927609050687 1.59101520979101 1.09678606260915 1.67942350595102 1.36495580350690 1.51325399502941 1.91172632932879 1.27370232429406 1.18721415540522 0.214225553292810 0.207071363578542 0.209018515813298 0.209640536108880 0.216676837718742 0.216112270831644 0.209429055026890 0.233459658811769 0.213129665294504 0.209657030065392 0.222054636583066 0.208554615238214 0.224776970637882 0.211572253330088 0.207071363578542 0.209892704925281 0.210166486940829 0.209265418023228 0.217804807856247 5 5|0 -|/ 25980812 25981940 25981185.25 25980788 25982018 - gene protein_coding_gene TRUE TRUE AT5G64990.1 AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding similar to AtRABH1e (Arabidopsis Rab GTPase homolog H1e), GTP binding [Arabidopsis thaliana] (TAIR:AT5G10260.1); similar to 80A08_22 [Brassica rapa subsp. pekinensis] (GB:AAZ67607.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.468911091847084 4.54501309952821 0.000923664597525846 1 5.56910256058901 3.25152476499382 0.468911091847084 0.107258633043638 AT5G54970_at 3.14250926702827 3.96273548061839 4.58902423466161 4.7016842066101 2.07486053364709 2.18433681585947 3.30548590795023 3.98638064711640 3.25806232896017 2.81574297293041 5.9976257915148 7.63972899676359 4.35212632186323 5.31038603997209 8.18337412115096 5.06927396822237 4.24707046087221 5.517812863098 2.5333765324954 0.239813904165253 0.236154987877452 0.237351870809773 0.236202096514316 0.258095973633356 0.260807502878653 0.239923686935316 0.242340790941517 0.258463565756598 0.240643532359462 0.245613937281686 0.24983718642918 0.236154987877452 0.263645269428044 0.255764685082718 0.241208020314707 0.252981876369992 0.239562634349232 0.236808583396115 5 5 + 22330499 22330817 22330655.727 22330436 22330990 + gene protein_coding_gene TRUE TRUE AT5G54970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26960.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45481.1) 0.633604092073958 4.54432234279643 0.000924685137486715 1 5.56815099801373 7.82274485263352 0.633604092073958 0.186471199384135 AT5G39020_at 6.25671315572601 6.62912269488329 7.69567784739975 7.69219196124018 7.69271368450776 7.00059726109039 3.69430947944298 4.09504224543213 6.11591437538476 5.41906954177246 6.74691218149734 7.0269485492587 6.46440608901262 7.0848233642943 5.85739848443635 6.84752694226235 6.02009303974107 6.48102965018077 5.61095020121017 0.226373631103158 0.209831698774848 0.218427313608296 0.219184394888012 0.204849312280750 0.226876031962056 0.229804841681543 0.219865640117724 0.22316171967524 0.209906743881115 0.210523339058464 0.212352738639998 0.212755585566962 0.221460675115811 0.214607347803408 0.204849312280750 0.216504185414919 0.222243154898617 0.210413061830677 5 5 + 15636007 15636556 15636285.182 15634147 15636588 + gene protein_coding_gene TRUE TRUE AT5G39020.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39000.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38990.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G39030.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.558262229806816 4.54206499729331 0.000928028488133309 1 5.56504078838087 12.4852728714026 0.558262229806816 0.152672362122503 AT5G02410_at 4.9070583631222 5.45561436850834 5.54312606752792 4.94291759970816 6.20663022053455 5.43262419782001 4.47891279262726 4.57699848376223 4.93855996039896 4.19354476662993 4.01033113487159 4.93091636677093 4.1883452257066 4.40813946588132 4.05995255150196 3.62264511147621 3.60833164654447 4.43870166890059 3.97233362217562 0.293858286060682 0.294626170028013 0.298408827287606 0.316039577536406 0.292455203975406 0.305533454986755 0.293551498373324 0.292455203975406 0.298995336728402 0.300555298817134 0.299619835842432 0.296570326577227 0.292455203975406 0.29366694125881 0.294844201825755 0.295220768185505 0.314745780927376 0.299585129349693 0.294317485830156 5 5 - 517448 518258 517839.5 517210 519754 - gene protein_coding_gene TRUE TRUE AT5G02410.1 DIE2/ALG10 family similar to OSJNBb0116K07.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE05548.2); similar to OSJNBa0014K14.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE02937.3); similar to aspara (GB:NP_001026565.1); contains InterPro domain DIE2/ALG10; (InterPro:IPR007006) -0.653037703966246 -4.54201042856777 0.000928109467331519 1 5.56496559187149 9.45626851813044 -0.653037703966246 0.195012721618633 AT5G47130_at 3.51073576158633 3.31462928096458 3.31586151518123 3.29512041969673 2.39697667705104 2.75036379218087 2.23446559284579 2.53516559783645 2.63209797295986 2.67816793971796 2.41287013488068 2.1743803430713 2.49661240230285 2.11772175032716 1.90574715412309 2.17146207016844 2.50613644979864 2.60426070501191 2.35814395577487 0.20579901068466 0.194887480457475 0.190041304487758 0.192392739069275 0.188837678742944 0.190971436191116 0.183370273861980 0.190079006738342 0.185247823079318 0.187168435507213 0.192747171313598 0.184330464402696 0.192818857169776 0.185677152197080 0.192597817230685 0.184720338441006 0.192977840284464 0.188220690126961 0.184981536101081 5 5|0 +|/ 19158306 19159075 19158792.222 19158243 19159238 + gene protein_coding_gene TRUE TRUE AT5G47130.1 Bax inhibitor-1 family / BI-1 family similar to ATBI-1 (ARABIDOPSIS BAX INHIBITOR 1) [Arabidopsis thaliana] (TAIR:AT5G47120.1); similar to bax inhibitor, putative [Brassica oleracea] (GB:ABD65015.1); contains InterPro domain Protein of unknown function UPF0005; (InterPro:IPR006214) -0.434748640188589 -4.53927441431851 0.000932179235973883 1 5.56119467183604 5.34655757918191 -0.434748640188589 0.0872495708805776 AT5G17400_at 4.26670460159349 4.06994138690022 4.9776504492397 4.99416085149356 6.05033924236317 5.43537894507689 5.1741872558763 5.12214638511726 5.39690099020224 5.62097822749214 6.16821292091295 5.79522698554156 5.77797537439459 5.90818871460526 5.68199633948982 6.56153096524559 5.63423558348137 5.63284061936489 5.81517362523685 0.208755447187012 0.201418854914409 0.198240834590015 0.194922159402305 0.19526897438354 0.193308008290322 0.192702420441789 0.196476537813963 0.206604455817555 0.197765252141463 0.197695144776257 0.194180455728172 0.193650873352114 0.193970996682543 0.196180626862162 0.192702420441789 0.196442634976699 0.199700389758705 0.204889476407203 5 5 - 5729043 5729628 5729317.727 5728793 5730378 - gene protein_coding_gene TRUE TRUE AT5G17400.1 ADP, ATP carrier protein, mitochondrial, putative / ADP/ATP translocase, putative / adenine nucleotide translocator, putative similar to AAC3 (ADP/ATP CARRIER 3), ATP:ADP antiporter/ binding [Arabidopsis thaliana] (TAIR:AT4G28390.1); similar to Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE81429.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.476895434022753 -4.53700582539895 0.000935567981026819 1 5.55806701293905 10.7643354158025 -0.476895434022753 0.112135252670514 AT5G17310_at 7.93979797149696 7.87053456445286 9.25583686553047 9.01019965300454 8.63661889619443 8.55656782085386 9.61284737223112 9.50192560702786 8.17123703724983 8.90082055053498 9.06960557528886 9.23198372910214 9.30035668511028 9.0705833501934 8.66177032204102 9.65963494628352 9.83286882098157 9.06215363858684 8.58338977849355 0.105471155051827 0.102553982208913 0.106607875243447 0.105608947868272 0.103773784475488 0.102977395252596 0.107487912705312 0.103745757761875 0.123514001287093 0.105322876351959 0.106558538173173 0.102260159366159 0.104918879338189 0.107867403765079 0.108101271881613 0.102747276455726 0.107533172711298 0.107530093717714 0.103973224444149 5 0|5 /|- 5697083 5697572 5697311.25 5696647 5700924 - gene protein_coding_gene TRUE TRUE AT5G17310.1|AT5G17310.2 UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative Identical to UTP--glucose-1-phosphate uridylyltransferase 1 (EC 2.7.7.9) (UDP- glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) [Arabidopsis Thaliana] (GB:P57751;GB:Q3E9G5); similar to UGP (UDP-glucose pyrophosphorylase), UTP:glucose-1-phosphate uridylyltransferase [Arabidopsis thaliana] (TAIR:AT3G03250.1); similar to UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] (GB:ABB88893.1); similar to UDP-glucose pyrophosphorylase [Cucumis melo] (GB:ABD98820.1); similar to UDP-glucose pyrophosphorylase [Bambusa oldhamii] (GB:AAO48422.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618)|Identical to UTP--glucose-1-phosphate uridylyltransferase 1 (EC 2.7.7.9) (UDP- glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) [Arabidopsis Thaliana] (GB:P57751;GB:Q3E9G5); similar to UGP (UDP-glucose pyrophosphorylase), UTP:glucose-1-phosphate uridylyltransferase [Arabidopsis thaliana] (TAIR:AT3G03250.1); similar to UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] (GB:ABB88893.1); similar to UDP-glucose pyrophosphorylase [Amorpha fruticosa] (GB:AAL33919.1); similar to UDP-glucose pyrophosphorylase [Cucumis melo] (GB:ABD98820.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618) -0.386146497214846 -4.53685148043606 0.000935799007775465 1 5.55785418865956 17.6920088049530 -0.386146497214846 0.0501102698770596 AT5G51960_at 6.8849080234983 7.06087634635291 8.29595713815462 7.99603436197522 8.29069268130037 7.86194417854867 6.09487221249724 6.59400565103486 5.92440396753826 5.35062572102829 7.2840038517378 7.93799957924844 7.41235454529169 6.77510405930505 8.16966707563423 7.31419500121412 6.7825407835182 7.21607378937753 5.91003442506150 0.187186836460606 0.177105350663722 0.176672997643256 0.186630050329815 0.176411896755885 0.180420515533389 0.181451852784494 0.184280558270879 0.186255561959874 0.189419969364382 0.177310121324637 0.173529552461013 0.180915841617659 0.175358556696690 0.176941535688506 0.176741110410246 0.176893759820250 0.182030504906387 0.186445435656702 5 5|0 +|/ 21127946 21128311 21128122 21127929 21128574 + gene protein_coding_gene TRUE TRUE AT5G51960.1 similar to At5g51960 [Medicago truncatula] (GB:ABE81134.1) 0.508547229498365 4.53666772981776 0.00093607412792031 1 5.55760081199959 13.9298348442746 0.508547229498365 0.128792437277696 AT5G01520_at 7.94404288526272 8.19920638017968 9.94030426470734 9.9369184810143 10.4856340606275 10.4299320454081 9.07493230722708 9.32625613429264 8.253787771995 8.51275346650189 9.4693716371012 8.30574086737233 9.60627685040702 8.96663515250366 8.08006540810598 9.11803790297048 9.68582884977596 9.30858205291046 8.11338819071526 0.157052198008606 0.143998595310252 0.15297980039509 0.148431131556279 0.151589414623521 0.150270359647861 0.145676466764460 0.145008522335805 0.165014286392686 0.153952492804381 0.146356846124996 0.141079419599256 0.143147349617519 0.159093084077890 0.143331877439123 0.146701089663126 0.158346425636954 0.146833044917962 0.151917282454494 5 5|0 +|/ 207545 208359 208043.111 206431 208610 + gene protein_coding_gene TRUE TRUE AT5G01520.1|AT5G01520.2 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to Os04g0679800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054282.1); similar to H0801D08.18 [Oryza sativa (indica cultivar-group)] (GB:CAJ86260.1); contains InterPro domain Hydroxymethylglutaryl-CoA reductase, NAD-binding; (InterPro:IPR009023); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)|similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93676.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABE80772.1); contains InterPro domain Hydroxymethylglutaryl-CoA reductase, NAD-binding; (InterPro:IPR009023) 0.400144504159375 4.53583640625294 0.000937319890654343 1 5.55645441466529 18.0975918947803 0.400144504159375 0.0627275422966105 AT5G16060_at 6.74540961563188 7.08832660032488 7.7326911691375 7.89420744860245 7.20206029311821 7.22076308225014 6.85024543196962 7.21139310654974 6.2597978550338 6.58956267527449 7.22538548770526 7.32724658270934 6.69873523168487 7.50840443464674 7.732382610978 7.18265644220746 6.9965508646768 7.07877779857651 6.8899429636957 0.167248754444713 0.167512365091091 0.178930802141063 0.166435734947884 0.173273010912671 0.167746802827830 0.168403539655598 0.169479153110597 0.180778730217458 0.180576432117184 0.168196979240982 0.168433666765613 0.174928160770956 0.170937057231394 0.168049263174893 0.172068136537628 0.178675889504454 0.177123743409064 0.167914980761864 5 5|0 +|/ 5246167 5247188 5246636.111 5246125 5247434 + gene protein_coding_gene TRUE TRUE AT5G16060.1 similar to hypothetical protein [Cleome spinosa] (GB:ABD96913.1) -0.439477730487208 -4.53231732300998 0.000942612724720628 1 5.55160028384989 14.1424047249394 -0.439477730487208 0.0906609920933064 AT5G49900_at 6.10169249350123 6.35695407692646 6.65696906058756 6.54326294751505 6.39618108923215 6.70136910515418 3.70766316456774 3.54202961950186 4.13107889566944 3.88295916199883 5.11455787214175 4.97802591110291 4.82644689110962 4.8798199092449 4.96310019822023 4.98325735856501 5.49002728318935 5.33533537669187 3.95775616882900 0.217034326136597 0.21353340441372 0.217622653043426 0.215249446871022 0.222717043469517 0.223369407338549 0.215537025638681 0.217495876724490 0.220916613262397 0.217853753485415 0.21630543311683 0.216010205094730 0.220831845738005 0.228461288703998 0.217027419408506 0.213999785532677 0.226712848814413 0.220200125993194 0.21754727196449 5 5 - 20314485 20315089 20314711.455 20313744 20319572 - gene protein_coding_gene TRUE TRUE AT5G49900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33700.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10060.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24180.2); similar to unknown protein [Oryza sativa] (GB:AAL31035.1); similar to Os11g0242100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067588.1); similar to At5g49900 [Oryza sativa (japonica cultivar-group)] (GB:AAX95400.1); contains InterPro domain Protein of unknown function DUF608; (InterPro:IPR006775) 0.41868082923508 4.52948060034287 0.000946902188004908 1 5.54768584588203 10.2817249073894 0.41868082923508 0.0771330383611164 AT5G13850_at 7.66373701088779 7.51862318568199 8.1117555187606 8.17661041242099 7.99292001684104 8.02230381743569 7.58253885774956 7.73516763092194 7.61778718221799 7.42137551604624 8.08910775205264 8.24132323554213 8.24822952683469 8.25721134008393 8.44001444262106 7.90394373836668 7.86847772961698 8.1695222448021 7.37016621203045 0.120334563325468 0.117049642230468 0.119811416484281 0.114747043568114 0.127840364213173 0.128990457753138 0.121707776309342 0.120859316207047 0.133510135847385 0.121229666446533 0.119390945074740 0.122255197039426 0.121129721901959 0.129495387178455 0.122454623660190 0.117478082335863 0.127685780803807 0.125838887067448 0.122221361251153 5 5|0 +|/ 4471372 4472487 4472189.7 4471280 4472857 + gene protein_coding_gene TRUE TRUE AT5G13850.1 nascent polypeptide-associated complex (NAC) domain-containing protein Identical to Nascent polypeptide-associated complex subunit alpha-like protein 3 (NAC-alpha-like protein 3) (Alpha-NAC-like protein 3) [Arabidopsis Thaliana] (GB:Q6ICZ8;GB:Q9FFY7); similar to nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative [Arabidopsis thaliana] (TAIR:AT3G12390.1); similar to Nascent polypeptide-associated complex NAC; UBA-like [Medicago truncatula] (GB:ABD32881.1); contains InterPro domain Nascent polypeptide-associated complex NAC; (InterPro:IPR002715) -0.374866731061551 -4.52780282069873 0.000949448867527772 1 5.54537000596164 15.6614595836732 -0.374866731061551 0.0384723246986242 AT5G64000_at 6.78796364869744 7.20883284864275 8.95744706557289 9.05594758276815 7.65065129794371 7.13186884107867 2.59881891779157 2.46291722653957 4.59153014638224 2.48547826132917 2.45775527504491 2.35765730033158 2.69294609090500 2.60406497157803 2.30038411565828 3.37339546269801 2.22971671721448 2.88040792065781 2.81875537746173 0.337980030532727 0.329649194054176 0.338295852903769 0.329740429183591 0.3319251866803 0.318899812783274 0.314790936038101 0.314309328017641 0.325968595325766 0.319029408126682 0.319268516144649 0.314309328017641 0.314968902442334 0.314309328017641 0.320689221533699 0.314309328017641 0.321236429125505 0.315611919004909 0.320587605857310 5 5 + 25634755 25635615 25635105.545 25633864 25635857 + gene protein_coding_gene TRUE TRUE AT5G64000.1 SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase 3'(2'),5'-bisphosphate nucleotidase Identical to SAL2 phosphatase (3'(2'),5'-bisphosphate nucleotidase 2) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 2) (DPNPase 2) (Inositol-1,4-bisphosphate 1-phosphatase 2) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 2) (IPPase 2) (SAL2) [Arabidopsis Thaliana] (GB:O49623); similar to 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G09290.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.48898229199724 4.52715388697938 0.000950435810192624 1 5.54447415384021 9.43712038370537 0.48898229199724 0.119199085476775 AT5G64770_at 10.5076722553861 10.3949525422964 11.1169146568229 11.2048964172513 11.5128334301071 11.5323587126000 10.8785029777074 11.1978642116526 10.3305720847429 10.9616843566370 12.2941410091625 12.3446921863440 12.3020155238391 12.1392659317901 12.147400692122 12.3247620329523 12.1771025796300 12.0833122053107 11.4691781063432 0.138865811866260 0.137836154436725 0.143135673722135 0.137688050066228 0.133621762074013 0.142565120991305 0.131445218521395 0.133484396011987 0.141312635473833 0.128910213677229 0.127921880302230 0.127853688560775 0.129295854275359 0.130534517225055 0.132077698413786 0.128819727314436 0.128763506447600 0.132820162320290 0.130342914256160 5 5|0 -|/ 25914907 25915287 25915034 25914593 25915350 - gene protein_coding_gene TRUE TRUE AT5G64770.1 similar to 80C09_10 [Brassica rapa subsp. pekinensis] (GB:AAZ41821.1) 0.396679203161129 4.52483963707128 0.000953964290473794 1 5.54127875085056 22.6167817518371 0.396679203161129 0.0606480330030447 AT5G01590_at 6.6806135778424 6.23073515876667 6.74061822525094 6.00203604742344 7.11841227307562 6.0894569810656 7.0429892521852 6.49311605836906 6.81633252854192 6.88178326662261 7.1842556979182 7.60113483352219 7.11628793478109 7.42800361235743 7.98032812225576 7.31796519484403 7.20314591252098 7.49720792644368 6.64957754158918 0.142146342902523 0.146993270339163 0.148706641000730 0.145357232443130 0.146321322739137 0.153521728342353 0.146401063701457 0.149233854478076 0.150770736823168 0.143910456612026 0.146439419393163 0.144000446292099 0.141589133561595 0.148390687549612 0.148355186496573 0.144850135096564 0.144762649164628 0.149121335458318 0.152226967479734 5 5|0 +|/ 225430 225967 225690.2 224173 226923 + gene protein_coding_gene TRUE TRUE AT5G01590.1 similar to RNA binding protein [Bigelowiella natans] (GB:ABA27214.1); contains domain GYF domain (SSF55277) -0.785523580435413 -4.52226331826582 0.000957908582568874 1 5.53772042307459 13.6490499967049 -0.785523580435413 0.251317067630587 AT5G14700_at 3.28192910319428 3.86643359820777 4.20811646956079 4.17620539551494 5.0161684596007 4.58922877312075 3.32061197768467 2.76048076807392 2.89581335459263 2.7163645591514 4.41592185224628 5.31467378528396 3.61940423486364 4.12442564545856 4.30013646684003 3.40832763904013 2.99265778076083 4.42267343736114 2.84841838070251 0.230999499197696 0.226696291454046 0.233614587404221 0.222672788410992 0.225890256360192 0.242230963319626 0.222672788410992 0.239715617324653 0.237604691304604 0.228666115020286 0.224011247914228 0.222672788410992 0.224948580224973 0.232597777196121 0.227654809945289 0.222672788410992 0.245794070565722 0.224049347861099 0.229676559596865 5 5 - 4740673 4741375 4741118.182 4740255 4743449 - gene protein_coding_gene TRUE TRUE AT5G14700.1 cinnamoyl-CoA reductase-related similar to cinnamoyl-CoA reductase-related [Arabidopsis thaliana] (TAIR:AT4G30470.1); similar to Os01g0639200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043674.1); similar to Os05g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056413.1); similar to cinnamoyl CoA reductase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD68587.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.568181359000025 4.52160358594995 0.000958921380449889 1 5.53680904051601 7.3498850031434 0.568181359000025 0.158483333491413 AT5G53480_at 7.42288004618243 7.58688011180942 8.74298529850497 8.68637403378732 8.56261807279615 8.57834606387612 7.37963653962855 7.82321221600809 7.56294864754281 7.37963552716493 9.00182471981344 8.93203862127077 9.13296860748635 9.07074405219909 8.71020359414492 9.047963613625 8.75832189329588 8.64067519428976 7.11606126834712 0.124842021867398 0.121533195959728 0.125497343245635 0.126651426082270 0.127090109785101 0.123635668795532 0.134631905913578 0.126295409459809 0.132044686461202 0.131415399750614 0.122411123610837 0.124372121650323 0.122145209106436 0.124957422433539 0.122606380693727 0.122026146192913 0.126288503388026 0.126903154723535 0.134350759342027 5 5 + 21733303 21734375 21733907.636 21730592 21735008 + gene protein_coding_gene TRUE TRUE AT5G53480.1 importin beta-2, putative similar to protein transporter [Arabidopsis thaliana] (TAIR:AT2G16950.2); similar to Importin beta-like protein [Oryza sativa (indica cultivar-group)] (GB:CAC79691.1); similar to Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) (ISS) [Ostreococcus tauri] (GB:CAL52524.1); similar to Importin-beta N-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95425.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 0.425566749546663 4.51958615316242 0.000962025478854796 1 5.53402161260162 16.2302287235078 0.425566749546663 0.0824705989715048 AT5G16980_at 3.75438085390316 4.24199096445023 5.07095496185865 5.25978778535247 4.70033076879940 4.45257945819841 2.47352870957483 3.04080323425801 2.22122473927914 1.87759696995238 1.82783476478553 2.60421100791617 2.75376600264049 2.9476470761484 2.30708114571839 3.36103407492056 3.12667511420789 2.90548027250018 2.27209706657161 0.345884467926695 0.337545683294572 0.344819322437469 0.348157326529214 0.366700769328780 0.34945041813257 0.326670165233669 0.328555710664761 0.340015263189499 0.330750142074415 0.342020400563692 0.330302673265902 0.328945912510332 0.329662079641405 0.335830868620783 0.326670165233669 0.340154114025384 0.327037462782127 0.340452005598744 5 5|0 -|/ 5579326 5580015 5579755 5579146 5580783 - gene protein_coding_gene TRUE TRUE AT5G16980.1 NADP-dependent oxidoreductase, putative similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 0.529101201185525 4.51567972096307 0.000968066199196602 1 5.52862224095658 6.55072247919393 0.529101201185525 0.140227952107297 AT5G58130_at 6.2670106731281 6.0441415105565 6.66149199242396 6.3473193240961 6.80368936096589 6.7197904142655 5.58081086988947 5.86738086531357 6.1674662078678 5.76572150120319 6.3808572019249 6.99020150605781 6.62491726189093 6.5205502360591 6.76414863566127 6.66708115668374 6.12247337282088 6.71518938744011 6.24169909802442 0.20065613138979 0.191092579683538 0.195429877607954 0.205875563847583 0.192129149060668 0.211523107127839 0.191803053493449 0.191854806189075 0.208326668900798 0.191092579683538 0.193707645513129 0.194448290906191 0.193755276413307 0.203663240079830 0.198481261339035 0.195053852248955 0.221787678306121 0.200177643327806 0.196676689829970 5 5 - 23538500 23538854 23538682.909 23538275 23541023 - gene protein_coding_gene TRUE TRUE AT5G58130.1 RNA recognition motif (RRM)-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to Os02g0138200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045836.1); similar to marker Xucw84 [Triticum tur (GB:ABI15899.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.428019912173675 -4.51567093727703 0.00096807982681048 1 5.52861009744394 12.6146908499211 -0.428019912173675 0.084342895649477 AT5G11210_at 1.24484400686364 1.36133594857061 2.42915773803180 2.42750132272753 1.12492450842892 1.07029178618698 0.44772317334082 0.0211544517254493 0.262632609868197 0.635100887789706 0.454656681247604 0.55024835236984 0.0752362605994426 -0.0632737021097563 -0.182976569617691 0.388181787631709 0.364629332158921 0.662651725157571 0.0919275640408225 0.207532190719910 0.204905983075100 0.218297653010006 0.227260412155006 0.203644855185189 0.204450655478084 0.205537627478889 0.206182466155936 0.213249768517434 0.20603799184651 0.206002407396599 0.20416717042428 0.203644855185189 0.210124260899473 0.210258716636072 0.208876493462615 0.203644855185189 0.210626506168906 0.206157363124378 5 5|0 -|/ 3571387 3571951 3571636.889 3571215 3574538 - gene protein_coding_gene TRUE TRUE AT5G11210.1 ATGLR2.5 (Arabidopsis thaliana glutamate receptor 2.5) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GLR2.5) [Arabidopsis Thaliana] (GB:Q9LFN5); similar to ATGLR2.2 (Arabidopsis thaliana glutamate receptor 2.2) [Arabidopsis thaliana] (TAIR:AT2G24720.1); similar to ATGLR2.6 (Arabidopsis thaliana glutamate receptor 2.6) [Arabidopsis thaliana] (TAIR:AT5G11180.1); similar to ATGLR2.7 (Arabidopsis thaliana glutamate receptor 2.7) [Arabidopsis thaliana] (TAIR:AT2G29120.1); similar to Glutamate receptor 2.7 precursor (Ligand-gated ion channel 2.7) (GB:Q8LGN0); similar to Glutamate receptor 2.6 precursor (Ligand-gated ion channel 2.6) (GB:Q9LFN8); similar to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GB:Q9LFN5); contains InterPro domain GPCR, family 3, metabotropic glutamate receptor-like; (InterPro:IPR000337); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) 0.416951846199994 4.51120317469139 0.000975037685567027 1 5.52243168194657 1.57139474398244 0.416951846199994 0.0771052671801176 AT5G63600_at 2.22866789076878 1.86070618464178 1.59290723224203 1.69027658306453 1.49518290332966 1.84485164661923 2.13854535875241 1.79379767075652 2.23517811501323 2.12592800427937 2.22729407089139 1.87098170012288 1.93255082026702 1.79295747974259 2.07173519483844 1.81599295133818 1.67263743088576 1.96425451160826 2.18357337138257 0.191706968335357 0.193103695582527 0.189925457003962 0.189662523134332 0.201584928674441 0.191643206476507 0.205434969189301 0.201387905878204 0.202620388186965 0.195087264510003 0.189662523134332 0.194349195465549 0.197943515603306 0.197894901744594 0.189819621578430 0.194843171216890 0.196837326459644 0.200234727681888 0.214795299717318 5 5 - 25478321 25478795 25478596.727 25477910 25479684 - gene protein_coding_gene TRUE TRUE AT5G63600.1|AT5G63600.2 flavonol synthase, putative encodes a protein whose sequence is similar to flavonol synthase similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (GB:O04395); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (CitFLS) (GB:Q9ZWQ9); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123)|similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (CitFLS) (GB:Q9ZWQ9); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.465814240724424 -4.51056446491761 0.00097603667468441 1 5.52154814072107 3.88067210886530 -0.465814240724424 0.107516371933759 AT5G47870_at 6.3761461463934 6.31533196961723 7.23770539868843 6.93305955281837 7.25493359784018 6.91951404575349 6.71103402560537 6.69102384438483 7.3321689606693 6.90039647676776 7.80280623521344 7.54611447065022 7.72176495074351 7.74973114249751 7.7070430989465 7.98151839316033 7.41776911605716 7.8216968124847 6.97180655110083 0.193105372372429 0.19145250793036 0.197998278292254 0.203786358597418 0.193371487874040 0.197831250274436 0.197639040143366 0.201813065342417 0.197275668531884 0.196916897794040 0.188029123178090 0.196891935725828 0.190163159508401 0.19015343370059 0.192405491517288 0.188491069204603 0.196269241346790 0.189947036827525 0.193155869845198 5 5|0 -|/ 19401785 19402992 19402480.8 19401594 19403095 - gene protein_coding_gene TRUE TRUE AT5G47870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71310.1); similar to Os03g0851500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051915.1); similar to Os09g0512800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063645.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD34413.1) -0.419557604091944 -4.50697276543341 0.000981674473241692 1 5.51657837385464 14.1981833344619 -0.419557604091944 0.0791929111532477 AT5G12400_at 5.41636745288352 5.16158459497133 5.89717057552138 5.91882106199602 6.3070447326365 5.9030461046304 5.13830629497862 5.07815457228998 5.43048737725411 5.13503394500067 5.3917643997341 5.77515846565062 5.31942654875095 5.79248369950609 5.52697891367503 5.80389148660918 5.37791405631673 5.82238283342128 5.29952701336027 0.239073703203888 0.233699107865910 0.245755399923508 0.235464750464893 0.246820769893000 0.243607194307741 0.241922356520656 0.233857326167924 0.256801654891530 0.251929866936032 0.241847599838195 0.246338240065514 0.238726413502330 0.23880698071777 0.237488226664854 0.241862585369163 0.242202597766448 0.247830165548916 0.244185171531935 5 5 + 4020319 4020840 4020632.364 4013814 4020910 + gene protein_coding_gene TRUE TRUE AT5G12400.1 PHD finger transcription factor, putative similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G22760.1); similar to PHD finger transcription factor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31424.1); similar to Os07g0661500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060538.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DDT; (InterPro:IPR004022); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) -0.425538172596159 -4.50461410198697 0.00098539545977673 1 5.51331354438163 11.0473616715700 -0.425538172596159 0.0833929882577304 AT5G15950_at 7.54459707788586 7.78635214047649 9.32822476221724 9.06852449319403 8.57075150395356 8.1746455199858 10.5506176617996 10.2410711711665 9.38342751674374 9.47382266400885 9.55682766010622 9.87540813210718 10.4125237769904 10.1532558320083 9.67629369095916 10.8805495920816 10.8581418169069 10.4144437693546 9.49334629130936 0.180761751706193 0.155716361317505 0.137778738876174 0.143701859369740 0.136055148165901 0.1647812798361 0.134442030381873 0.134442030381873 0.147789680866142 0.142265218508887 0.147134165769572 0.134442030381873 0.135941758021016 0.143735622869052 0.136738367162621 0.137346505411490 0.145757473489525 0.134442030381873 0.135277724462396 5 5 + 5207201 5207723 5207450.909 5205872 5208039 + gene protein_coding_gene TRUE TRUE AT5G15950.1|AT5G15950.2 adenosylmethionine decarboxylase family protein|adenosylmethionine decarboxylase Identical to S-adenosylmethionine decarboxylase proenzyme 2 (EC 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] (SAMDC2) [Arabidopsis Thaliana] (GB:Q9S7T9); similar to SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE) [Arabidopsis thaliana] (TAIR:AT3G02470.3); similar to S-adenosyl-L-methionine decarboxylase [Brassica juncea] (GB:AAR15894.1); similar to S-adenosylmethionine decarboxylase proenzyme 2 (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] (GB:O49972); contains InterPro domain S-adenosylmethionine decarboxylase; (InterPro:IPR001985) -0.463219846952835 -4.50313353767948 0.000987738759918383 1 5.51126368537544 18.7474127202523 -0.463219846952835 0.106482592043624 AT5G20110_at 5.12675364132789 5.01053268581526 6.74220849017005 6.64124967273268 8.12065946525596 7.31156600248049 4.89550895652178 5.02383966252318 4.90550682326499 5.03016324169371 6.65910898489063 5.45262480488216 6.76650785122856 7.23047847643211 4.81185883666643 6.06034829134622 5.95373897882297 5.81335767195013 5.58636713434109 0.228444980470638 0.222521402469042 0.235989767965458 0.227068401302433 0.241955936780771 0.243876418774324 0.230151550829043 0.224250826952173 0.238080422389434 0.224593056594294 0.225237602493687 0.224324856141530 0.227695637539540 0.243045381141325 0.237914422065711 0.221782495644702 0.236713553769049 0.229428446491759 0.227617396767851 5 5 - 6791567 6793180 6792595.273 6791489 6793348 - gene protein_coding_gene TRUE TRUE AT5G20110.1 dynein light chain, putative similar to dynein light chain type 1 family protein [Arabidopsis thaliana] (TAIR:AT1G23220.1); similar to dynein light chain [Vicia faba] (GB:BAD99112.1); similar to Os01g0555600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043322.1); contains InterPro domain Dynein light chain, type 1; (InterPro:IPR001372) 0.53573734018533 4.50195903025152 0.000989601836409839 1 5.50963730128658 11.7427975155004 0.53573734018533 0.144249236725898 AT5G08480_at 0.728880191782336 0.773375188597573 0.881048332817772 0.9404446039192 0.861800511112287 0.786536089013624 1.11265298562421 1.13356892987425 1.26227384368298 1.45405813826433 2.47927590811524 2.59370641184506 2.27949661779026 2.40695820793376 2.18182016939564 2.07837395759348 1.57551520936993 2.37470665056674 1.11794667219904 0.174268824782512 0.16895131944589 0.177319171813561 0.171719758386379 0.176525026155205 0.169170211755018 0.170316426673739 0.169297053733172 0.169692510588002 0.173323891854929 0.182377796004628 0.174790681517456 0.174342205919720 0.180210144690740 0.170648665429053 0.170983413248392 0.1870354037339 0.168374383782331 0.173545559946510 5 5|0 +|/ 2744511 2744977 2744727 2743621 2745112 + gene protein_coding_gene TRUE TRUE AT5G08480.1|AT5G08480.2 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT1G28280.1); similar to VQ [Medicago truncatula] (GB:ABE85646.1); contains InterPro domain VQ; (InterPro:IPR008889)|similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT2G33780.1); similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT1G28280.1); similar to VQ [Medicago truncatula] (GB:ABE85646.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.360352907051839 4.49513439501646 0.00100050098935377 1 5.50018234765651 2.66445061723851 0.360352907051839 0.0186465350040701 AT5G44730_at 6.55614258841114 6.69161630271838 7.11490067522982 7.29609071774694 8.59881668389574 7.47638776294789 5.42681139861159 5.59885655969462 4.31158787303704 4.76341513563786 6.7135417848356 6.70368705457305 6.21023230063005 6.67885062314396 6.66545950558267 5.74626702508 6.30319844197152 5.72509159066771 4.43498030017289 0.237786383494077 0.244009896786352 0.248600522116285 0.238904836127853 0.245360464659510 0.245662260073816 0.244392127264341 0.237283239079606 0.273360909838423 0.253453408351777 0.242486009487320 0.239208250903384 0.249148529935416 0.243302344330647 0.23873424442581 0.239308157732174 0.251156442419528 0.243881273949791 0.247873053896773 5 5|0 -|/ 18062850 18063539 18063170.8 18062723 18064158 - gene protein_coding_gene TRUE TRUE AT5G44730.1|AT5G44730.2 haloacid dehalogenase-like hydrolase family protein similar to Os02g0173600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046041.1); similar to Os06g0665100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058303.1); similar to haloacid dehalogenase-like hydrolase domain containing 3 [Bos taurus] (GB:NP_001014896.1); contains InterPro domain HAD-superfamily subfamily IA hydrolase, REG-2-like; (InterPro:IPR011949); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 1; (InterPro:IPR006439); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.658440079222529 4.49334671657215 0.0010033768132659 1 5.49770436642049 12.2682622413703 0.658440079222529 0.200372280837040 AT5G61500_at 8.76647574721693 8.8905011284771 9.99198159057566 9.9654366145582 10.2578070101615 10.0198347176615 8.66700415560213 8.60651479375456 8.46747651777485 8.37070628129321 9.50847820292685 9.29021783344624 9.48316372952663 9.55001300116508 9.15360085025102 9.71959543495834 9.25364956045311 9.17636476354859 8.50982953648673 0.114992112941460 0.111024745506800 0.111134499351173 0.112243916738551 0.114933415517125 0.117887761457004 0.118408819705988 0.114544203141193 0.118026118309649 0.126164958467419 0.112237611012560 0.111024745506800 0.115868832056261 0.118848845844849 0.115944547740229 0.111024745506800 0.126802509487715 0.118495386099836 0.119399403427162 5 0|5 /|- 24751442 24752488 24752028.889 24751013 24754079 - gene protein_coding_gene TRUE TRUE AT5G61500.1 autophagy 3 (APG3) similar to autophagocytosis protein [Sisymbrium irio] (GB:AAR15430.1); contains InterPro domain Autophagocytosis associated protein, C-terminal; (InterPro:IPR007135); contains InterPro domain Autophagocytosis associated protein, N-terminal; (InterPro:IPR007134) 0.380060155725556 4.49163875088016 0.00100613253698119 1 5.49533637314523 18.3163059033606 0.380060155725556 0.0478259680702683 AT5G20600_at 5.37329578149552 5.95436816298891 6.31260694672546 6.51231380447631 6.18675940092115 6.41923186722715 5.44351760837439 5.80128494913821 5.48802314442915 5.27213743179656 5.57881663434138 5.80880995088576 5.94332820673647 5.74215326121465 5.82045999036696 5.87301324627009 5.41847536025983 5.67906460861906 5.53942943132516 0.197915761581687 0.193439427649405 0.195648839549005 0.199682108432407 0.203552012238620 0.211825179223362 0.194656456674046 0.200769982690938 0.212806026381900 0.199605130141631 0.19324964932827 0.192138745440976 0.196242213933876 0.192138745440976 0.198726939177879 0.194099987764322 0.213070492239365 0.198699395648674 0.192876637147889 5 5 - 6966387 6966827 6966628.636 6966180 6968035 - gene protein_coding_gene TRUE TRUE AT5G20600.1 similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87179.1); contains InterPro domain Nucleolar, Nop52; (InterPro:IPR010301) -0.50443672196264 -4.48850612531466 0.00101120762050338 1 5.49099189010666 11.5835282284286 -0.50443672196264 0.129452391120524 AT5G56770_at 1.81586340222688 1.76835394770874 1.79270023974572 1.88668743377173 1.31926783161819 1.43296585945435 1.69244099523160 2.05158027695694 1.91401788622622 2.22246524787373 1.75463660035295 1.57906682472541 2.10910656037844 1.80006224832976 1.62242158368304 1.60256280816243 2.03091153080424 2.08636671222214 2.19422063943829 0.201372830543588 0.199281146114855 0.199281146114855 0.205463238951554 0.202139411804773 0.203040453110043 0.200982348806245 0.201795401295527 0.203576552003287 0.201102167221274 0.203620683175761 0.20185200806913 0.211198714787011 0.211805087710904 0.208770319934574 0.201944835495577 0.204032800658356 0.200200334457551 0.200604773456444 5 5|0 -|/ 22980250 22980899 22980586.6 22980220 22981215 - gene protein_coding_gene TRUE TRUE AT5G56770.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56780.1); similar to transcripteion factor [Vicia faba var. minor] (GB:CAA66483.1) -0.401474617855694 -4.48101518805331 0.00102345310927623 1 5.48059635158286 3.68667072322013 -0.401474617855694 0.067690482975158 AT5G19320_at 5.93944588075608 6.0036233286417 6.72996159382906 6.84396722646602 6.617543819864 6.8314098525216 5.44399275065576 5.39147087590824 4.29107783522356 4.67098920800348 5.79179205835956 6.43998137557832 6.35919216214314 6.18381305477596 6.1516868963092 5.98253500938849 6.23201158027868 5.92840872983471 4.32038567104771 0.190881662433110 0.184731922470947 0.191936874454815 0.190177048986309 0.183689939211114 0.200836779950768 0.182698543770983 0.190302469850402 0.194650670218840 0.194513881168417 0.183968756737754 0.182698543770983 0.189559728949592 0.189825249818535 0.187242090211374 0.184055900581070 0.194247353460136 0.182698543770983 0.190898151858048 5 5 - 6505447 6505865 6505673.545 6505112 6507437 - gene protein_coding_gene TRUE TRUE AT5G19320.1 RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase. similar to RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1), RAN GTPase activator [Arabidopsis thaliana] (TAIR:AT3G63130.1); similar to Os05g0543200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056202.1); similar to Ran GTPase activating protein [Medicago sativa subsp. x varia] (GB:AAF19528.1); similar to hypothetical protein [Oryza sativa subsp. indica] (GB:AAD27557.1); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor type; (InterPro:IPR007091); contains InterPro domain Leucine-rich repeat, ribonuclease inhibitor subtype; (InterPro:IPR003590); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.375652326637314 4.47781599127252 0.00102873035250749 1 5.47615378109717 11.5057578392928 0.375652326637314 0.0443280986864051 AT5G16780_at 7.32547711836452 7.4059435556656 7.78463382014778 7.82924294459594 8.44952652505076 8.12163278087449 7.01243193124706 6.94025696895352 7.32871984935841 7.42710662291527 7.37284601918828 7.85485803450111 7.35340359283619 7.73550458725626 7.11472769846404 7.83355645920757 7.67713655206633 7.65653336986883 7.06447093701693 0.160703893293594 0.161452653623962 0.162262122674409 0.163452650267785 0.165121409631856 0.163618805768674 0.170357409349693 0.165488439652382 0.168912081340772 0.16248537372038 0.16427026831647 0.159635829227749 0.164171334338128 0.159635829227749 0.17714046310284 0.159635829227749 0.169853862591878 0.164737757393824 0.163570458718456 5 5|0 -|/ 5517807 5518682 5518247.9 5517493 5522261 - gene protein_coding_gene TRUE TRUE AT5G16780.1 SART-1 family protein Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14700.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE84261.1); similar to SART-1 protein [Medicago truncatula] (GB:ABE88274.1); contains InterPro domain SART-1 protein; (InterPro:IPR005011) -0.391647757670266 -4.47282347254425 0.00103702309392804 1 5.46921745923251 15.032769835081 -0.391647757670266 0.0602439933237569 AT5G39790_at 4.47292819191318 4.62553087710865 4.31050098526085 4.31787704236503 4.20625158830202 3.75303157515812 5.11661095940245 4.85965331384301 2.48688703031683 4.47807960724865 4.85012203878053 4.72333959113943 4.61596238900249 4.80937089242266 5.0847619782256 4.95158980636385 4.8108360264865 5.47262130000352 3.64943786152715 0.235325719983491 0.228295349713755 0.231467041190449 0.229553917039704 0.233497530697868 0.235552627157735 0.234349974999464 0.227872810963574 0.254290163721275 0.230879091584651 0.233236164443058 0.235150419365913 0.226961407396824 0.244781108473782 0.235378854066563 0.227985091970704 0.244895435575895 0.226961407396824 0.229322139475987 5 0|5 /|- 15950164 15950762 15950444.25 15949942 15952489 - gene protein_coding_gene TRUE TRUE AT5G39790.1 5'-AMP-activated protein kinase beta-1 subunit-related similar to 5'-AMP-activated protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G27070.1); similar to Os02g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045821.1); similar to ampk protein [Platanus x acerifolia] (GB:CAJ91133.1); contains domain 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT (PTHR10343); contains domain gb def: AT5g39790/MKM21_80 (PTHR10343:SF2) -0.438834143445725 -4.47130732864183 0.00103955536952223 1 5.46711018274349 8.68427823458614 -0.438834143445725 0.093957303762442 AT5G20620_at 9.19201348909396 8.94963716216957 10.1332788025531 9.79465720737286 10.3057491151500 9.84672770888506 9.06814302517417 8.86322147559014 8.58315659588258 8.82570869382375 10.1094389407221 9.8635661978962 10.0227549386950 9.76420238732248 10.0216075780518 10.0892493376622 10.0649119377056 9.86351076632137 8.33304678158694 0.136273729168585 0.137586729558459 0.136577431212190 0.145292144786617 0.134407741193969 0.138848951334938 0.134031616251748 0.143903064786542 0.147764385230667 0.134141444405935 0.142908691570211 0.13840666796329 0.136842258795961 0.141114851181555 0.142810720271046 0.138908391351884 0.135855694037525 0.139648334019096 0.132001484523225 5 5 - 6973506 6973842 6973685.545 6973073 6974948 - gene protein_coding_gene TRUE TRUE AT5G20620.1 UBQ4 (ubiquitin 4); protein binding encodes a ubiquitin polyprotein. Identical to Ubiquitin (UBQ16) [Arabidopsis Thaliana] (GB:P59263;GB:O80715;GB:Q38875;GB:Q9LDJ2;GB:Q9LYW1;GB:Q9M1P9;GB:Q9S7X3); similar to UBQ10 (POLYUBIQUITIN 10), protein binding [Arabidopsis thaliana] (TAIR:AT4G05320.4); similar to hexaubiquitin protein [Helianthus annuus] (GB:CAA40324.1); similar to polyubiquitin OUB2 [Olea europaea] (GB:AAL27564.1); similar to polyubiquitin 6 - parsley (GB:S30151); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.470981360122644 4.46650373017517 0.00104762145381765 1 5.46043114050956 18.7969498070710 0.470981360122644 0.112964321396541 AT5G47000_at 0.768776542353564 0.491818308643369 0.53962207990793 0.639922364475329 0.61052036373027 0.707330786101023 0.641534881606469 0.681221422965205 2.40935378077759 1.34975492242323 0.700448816868071 0.669427769408678 1.12985587688176 0.922207751147671 1.11689287618578 0.680636269024503 0.926947995619723 0.808512133519746 0.720850198184546 0.195075769173728 0.197313523948044 0.203008207341134 0.198970931046615 0.19875463778276 0.201539633972939 0.202316104039695 0.196759428909109 0.222004750583517 0.200169843667547 0.20022371608305 0.195091921692070 0.200876419344447 0.198769918950356 0.203286339204785 0.194642689139492 0.198027134899571 0.201825432006729 0.198811814791392 5 5 - 19086400 19086863 19086626.909 19086171 19087560 - gene protein_coding_gene TRUE TRUE AT5G47000.1 peroxidase, putative Identical to Peroxidase 65 precursor (EC 1.11.1.7) (Atperox P65) (ATP43) (PER65) [Arabidopsis Thaliana] (GB:Q9FJR1;GB:Q8RWF3); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT4G17690.1); similar to peroxidase, putative [Brassica oleracea] (GB:ABD65151.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.383851973530109 -4.46180668600046 0.00105557234702093 1 5.45389649583097 1.81643625366145 -0.383851973530109 0.0540953737266205 AT5G50915_at 2.62910054904156 3.42540743356952 4.49882727139385 5.31810215174578 6.52296087950336 6.50282808657758 5.24639249380877 6.07196764260463 4.65512978835725 5.38080865455481 7.69942010420984 6.54402389863633 7.19024878621282 6.94332941405379 7.58309727263198 6.29409432223851 5.19923777323713 6.3262362664879 3.88167285269951 0.272121919815657 0.265843438482007 0.262541176523686 0.264503289226390 0.259784743718326 0.258586405780813 0.258717723648165 0.261660012977076 0.265290425907525 0.252050018786054 0.260452948314057 0.254317735721404 0.267623083711493 0.253976499060082 0.258856298498127 0.255770919822932 0.26890896644374 0.258121840017878 0.257858826903592 5 5 - 20728192 20728977 20728508 20727435 20729541 - gene protein_coding_gene TRUE TRUE AT5G50915.1|AT5G50915.2 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G68920.3); similar to bHLH transcription factor GBOF-1 [Tulipa gesneriana] (GB:AAD56411.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.756303512251684 4.45700529050343 0.00106376556312576 1 5.44721283792127 10.7077806859893 0.756303512251684 0.243957709872530 AT5G06280_at 8.60322756326181 8.88920273543803 9.91146606914945 10.0382305739729 10.2562672920103 10.0223949822538 9.60624853817308 9.54737310905016 8.16972582446047 8.46194780908218 9.8389574216395 9.5827923381423 10.0483327638689 9.82242586477861 9.61644775328844 9.92202186904717 9.76947962626507 9.76901775755701 8.65736247001856 0.130053548058891 0.130649309940254 0.133993372002483 0.130087250795902 0.126661005972053 0.128706815981702 0.128517281604957 0.130961905929433 0.146277254022751 0.155226350219821 0.126461867961707 0.129378139900993 0.126937559852113 0.128609159112294 0.126909779520269 0.125072023835921 0.136858929963985 0.130664228719837 0.143362444778900 5 5 - 1918385 1918793 1918604.909 1917642 1918897 - gene protein_coding_gene TRUE TRUE AT5G06280.1|AT5G06280.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G52520.1) 0.399891928675538 4.45389168715964 0.00106911444768314 1 5.44287655556588 18.7222329206689 0.399891928675538 0.0683540975898274 AT5G54830_at 3.35249899879249 3.27880554755534 4.30233814097146 3.79657925887975 4.42203009477989 4.4537948268462 3.24819900955895 3.62462868882284 2.91382918398027 2.91825126559697 4.47003032707912 4.6168971301117 4.34053321147830 4.20267729722091 4.03456298929704 4.42362192565048 4.12625098124836 3.95039528409294 2.8395680998761 0.260398794384706 0.239935899177794 0.245091952225772 0.258454874819915 0.236878029147470 0.247524353101761 0.241441787107493 0.243102537929057 0.270015115290052 0.245149637992053 0.249935756697205 0.240260423565556 0.241889202587015 0.243846889797077 0.239802383610402 0.239418688054726 0.242916466282754 0.236878029147470 0.245211135453193 5 5 + 22292791 22293135 22292918.727 22290296 22293527 + gene protein_coding_gene TRUE TRUE AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein similar to auxin-responsive protein -related [Arabidopsis thaliana] (TAIR:AT3G61750.1); similar to PREDICTED: similar to conserved hypothetical protein, partial [Strongylocentrotus purpuratus] (GB:XP_001198381.1); similar to Os06g0649700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058218.1); similar to Os09g0557700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063905.1); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Region of unknown function DM13, Skeletor; (InterPro:IPR006609); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593); contains InterPro domain DOMON; (InterPro:IPR013050) 0.463355160524556 4.44464092345978 0.00108517405364040 1 5.42998351119766 7.39044465065427 0.463355160524556 0.109985881454787 AT5G49130_at 2.51217575316361 2.38672407439933 2.35992851928474 2.56129621223065 1.96542650812167 1.89592027828903 2.29415734544566 2.10193505161501 2.83254740857792 2.77179216456683 2.59343487006642 2.44775926101025 2.71223255424723 2.39244714488294 2.81877112370494 2.45844428885922 2.74376568481511 2.61958855727043 2.49360717531269 0.190983370584827 0.187208553004587 0.192492426495111 0.196044070458625 0.196276144870915 0.189161964333711 0.207501581402651 0.188736601198075 0.191348360640183 0.195389145941452 0.201393153674162 0.196832421417738 0.189229907825421 0.189559593647310 0.191426240815093 0.196846106951739 0.201514112525889 0.199708405508768 0.204840256598910 5 5 + 19934265 19934616 19934473.273 19933098 19934751 + gene protein_coding_gene TRUE TRUE AT5G49130.1 MATE efflux family protein similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G71870.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE77554.1); similar to Os03g0839200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051841.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) -0.381760377756486 -4.43629243915204 0.00109988526409733 1 5.4183356795505 4.90850597703182 -0.381760377756486 0.0541933597737386 AT5G28840_at 11.1141309451982 11.0852400259514 11.6346860006247 11.6354076709166 11.5392721546230 11.4977846983107 11.4673549431057 11.4212638054736 10.9376233409837 11.0687457713255 11.0397074461782 11.0247859543491 11.2374241598705 11.1329770291918 10.8385157001631 11.3681199906972 11.2822946794326 10.9751523530560 11.0025145310266 0.0723041972149739 0.0669272758650841 0.0694551435435868 0.0694713349762539 0.069242189909296 0.0679200754844554 0.0690288211657376 0.0706766607957225 0.0745789032620384 0.0669272758650841 0.0669272758650841 0.0684098857101386 0.0673276707232685 0.0695172874442285 0.0684419610059284 0.0678777726716354 0.0709577752700671 0.0687031934445573 0.0689515940843594 5 5 - 10862481 10863104 10862817.455 10862177 10864907 - gene protein_coding_gene TRUE TRUE AT5G28840.1 GME (GDP-D-MANNOSE 3',5'-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD binding / catalytic Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose. Identical to GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man 3,5-epimerase) [Arabidopsis Thaliana] (GB:Q93VR3); similar to UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2), catalytic/ dTDP-glucose 4,6-dehydratase [Arabidopsis thaliana] (TAIR:AT3G62830.1); similar to NAD-dependent epimerase/dehydratase family protein-like protein [Solanum tuberosum] (GB:ABB72807.1); similar to Os10g0417600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064609.1); similar to GDP-D-mannose-3',5'-epimerase [Malpighia glabra] (GB:ABB53472.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.35316761314424 -4.43264117396939 0.00110638513227926 1 5.41323775477702 22.4820592198068 -0.35316761314424 0.0118397824552766 AT5G61880_at 2.23441418380608 2.1975525254581 2.90363528136865 2.40716370091335 3.36431954143586 3.08007268586503 1.92000696934886 2.04999439273257 2.01426133097583 1.52316160157543 2.48830745319672 2.29360957598903 2.2898457023611 2.20981379059041 2.63355669896664 2.46594425791908 3.01472263534176 2.63998590112127 2.32127325609039 0.185861382128764 0.182318075809498 0.195069618006121 0.187860111262819 0.203818184622112 0.197421880345792 0.187016240136037 0.191085238820802 0.195394808545672 0.187662583409636 0.183374026689728 0.185051370383212 0.185410891259624 0.184771956717659 0.185725088801445 0.185662313500697 0.186470083710891 0.193258313476932 0.194833071633715 5 5|0 +|/ 24868153 24868690 24868406 24867483 24869002 + gene protein_coding_gene TRUE TRUE AT5G61880.1|AT5G61880.2 signaling molecule-related similar to TXR1 (THAXTOMIN A RESISTANT 1) [Arabidopsis thaliana] (TAIR:AT3G59280.1); similar to magmas-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87219.1); similar to Os10g0479600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064869.1); contains InterPro domain Protein Transporter, Pam16; (InterPro:IPR005341) 0.447611140474499 4.43049049506942 0.00111023260620317 1 5.4102339166134 4.74833090085755 0.447611140474499 0.101725502499265 AT5G46920_at 5.85726446194626 5.92938991421889 6.79812385813032 6.97209554131736 6.53127280002536 6.58648636796518 6.02199546728205 5.90439809587819 5.12195022383262 5.17007505822695 5.35118525673235 5.46329140349089 6.05738891063234 5.48022998421871 5.76305084378129 6.48825586229737 6.18965046319516 6.08612391892534 5.71584817925722 0.231514528269666 0.229712515527587 0.232081137654433 0.232738589365548 0.230586534798428 0.2388070574881 0.228140798478800 0.234780639717447 0.232038744348770 0.239819746402904 0.231405127973652 0.230342016508286 0.237846217848158 0.233943253968256 0.226071705768327 0.226071705768327 0.235171989022801 0.226071705768327 0.240176408114609 5 5 + 19072556 19073014 19072753.636 19070855 19073234 + gene protein_coding_gene TRUE TRUE AT5G46920.1 intron maturase, type II family protein similar to intron maturase, type II family protein [Arabidopsis thaliana] (TAIR:AT1G30010.1); similar to intron maturase, type II family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97559.1); similar to Os10g0567500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065434.1); contains InterPro domain RNA-directed DNA polymerase (Reverse transcriptase); (InterPro:IPR000477); contains InterPro domain Intron maturase, type II; (InterPro:IPR000442) -0.367618486112949 -4.42957634894502 0.00111187223607132 1 5.40895690091569 11.9230557637695 -0.367618486112949 0.0395935710504835 AT5G62710_at 2.75214164054634 2.9573771137316 2.34087549938611 2.3455294269728 2.39144884982824 1.88549207662427 2.99923865873366 3.51903265215455 3.15610143697458 2.37940107249833 3.1672593284492 3.6061624580663 3.39359502656306 3.54062687305805 3.70112163830409 3.06719398685082 2.76266535114020 3.47900339457851 2.73200511692524 0.217581304664894 0.222758222134255 0.218019671503588 0.224212986041021 0.229773071724437 0.223219910421913 0.226512911144162 0.228736261781003 0.235063457633784 0.223946351767477 0.224034924136478 0.217581304664894 0.217581304664894 0.227712318156070 0.217581304664894 0.219240934361151 0.232560083094643 0.226724898180931 0.221182930365813 5 5 + 25206801 25207497 25207167 25204529 25207826 + gene protein_coding_gene TRUE TRUE AT5G62710.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G31420.1); similar to Os03g0266800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049659.1); similar to Os12g0638100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067376.1); similar to somatic embryogenesis protein kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:AAU88198.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.499022762825036 -4.42301572546398 0.00112371450055410 1 5.39978794665357 5.69666168104336 -0.499022762825036 0.130460872467714 AT5G64310_at 3.80684756563641 4.16614816382826 5.74650797789936 6.00573736027284 4.08604683383962 3.95442695035638 3.95230917338224 4.27499444375112 4.28588583472558 4.34275834385665 5.60476208271214 6.26687519873735 5.34942046697783 6.23432907343525 6.85140931303008 6.27257604941137 6.04962402410447 5.26332679134142 3.99937078909356 0.294177663552272 0.273625224290775 0.278288557356906 0.273032310608549 0.268966430313466 0.280020007577954 0.275520291763851 0.271327623039054 0.280237786775488 0.268966430313466 0.274157523739348 0.268966430313466 0.268966430313466 0.273466588596272 0.273495636647070 0.281896459347106 0.268966430313466 0.279869847318250 0.268966430313466 5 5 + 25739244 25739611 25739439.273 25739159 25739872 + gene protein_coding_gene TRUE TRUE AT5G64310.1 AGP1 (ARABINOGALACTAN-PROTEIN 1) Encodes arabinogalactan-protein (AGP1). Identical to Classical arabinogalactan protein 1 precursor (AGP1) [Arabidopsis Thaliana] (GB:Q8LCN5;GB:Q94A23;GB:Q9ZT19); similar to AGP7 (Arabinogalactan protein 7) [Arabidopsis thaliana] (TAIR:AT5G65390.1); similar to arabinogalactan-protein precursor [Medicago truncatula] (GB:ABE93073.1) 0.439619729245732 4.42004557437894 0.00112911934085660 1 5.3956345789394 9.59706665738445 0.439619729245732 0.097549176365229 AT5G01390_at 5.8750651073381 5.80997525093284 6.2852285177425 6.55009133134656 6.64437630281715 6.57776534415783 5.71643879099746 5.7231828722433 5.69755174991261 5.4256055258333 6.2264550512847 6.23076790641006 6.18159994835205 6.10376518684128 6.37441533153672 6.46191085336938 6.31128852393953 6.69476471783274 6.07888407969227 0.163536984281961 0.172194863264649 0.166764538201840 0.164362757150059 0.169015416961790 0.179887879113201 0.163624007022033 0.165804109533769 0.169655880827754 0.163346126404984 0.161366817674380 0.165215379127588 0.162735936971480 0.16409138284651 0.164551093777067 0.167625860675262 0.172988096316146 0.171523037133558 0.160357215175723 5 5|0 -|/ 160539 161665 160890 160263 162298 - gene protein_coding_gene TRUE TRUE AT5G01390.1 DNAJ heat shock protein, putative similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT3G08910.1); similar to DnaJ-like protein [Nicotiana tabacum] (GB:AAF05720.1); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.374310182670343 -4.41498428108170 0.00113839256925158 1 5.38855363292027 12.1763328022429 -0.374310182670343 0.0486007938798479 AT5G57990_at 7.5211638815933 7.5608854464901 8.18536876668376 8.37965798875437 8.40484106380607 7.9608992098496 8.07022051665704 7.9143193923396 6.88347868817949 8.0674719206858 8.25394548355488 8.70859761306575 8.11682282585086 7.9562513241508 8.14339808058356 8.34561699478047 7.95976789013397 8.07358223429855 8.04331811241083 0.150956792292131 0.145131954612969 0.147135305036799 0.148465620879274 0.148575135044445 0.152917440954221 0.143525581651278 0.146229550610187 0.168828035407526 0.145547005758342 0.149522368685031 0.148724948831055 0.144418462520807 0.153979164569960 0.147039073211137 0.142640371159451 0.155722179945585 0.151735185910742 0.151579847684057 5 5 - 23487527 23488286 23488035.273 23487240 23491330 - gene protein_coding_gene TRUE TRUE AT5G57990.1 UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana] (TAIR:AT4G31670.1); similar to Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Medicago truncatula] (GB:ABE85427.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) -0.424354048235238 -4.41300927792814 0.00114203283970022 1 5.38578936885192 15.9294215563856 -0.424354048235238 0.0883622662924648 AT5G65050_at 4.99069109131787 4.83635472570022 4.96486800129081 5.40262269194196 5.64456921241816 5.42408463786365 4.76954635446366 5.10438163228567 4.89830778564741 4.80110001487711 5.44517745698355 5.44233616334404 5.37086736264879 5.16169649867076 5.4147617428043 5.62948938507844 5.32184736876545 5.10334561555034 4.74910722080308 0.138748504514169 0.148881513137194 0.151015705786192 0.138890315983993 0.148419535087664 0.146937685937967 0.139675653542495 0.14713329958716 0.148629595115403 0.142935717378344 0.138748504514169 0.144078246527690 0.143654053380007 0.142948795022990 0.140409941994121 0.142631052808203 0.138748504514169 0.138748504514169 0.147419995008898 5 0 / Inf -Inf NA 25999480 26003552 + gene protein_coding_gene TRUE FALSE AT5G65050.1|AT5G65050.2 AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31); transcription factor|AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31) Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. Identical to Agamous-like MADS-box protein AGL31 (Protein MADS AFFECTING FLOWERING 2) (AGL31) [Arabidopsis Thaliana] (GB:Q9FPN7;GB:Q84NB5;GB:Q9FGD9); similar to MAF3 (MADS AFFECTING FLOWERING 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65060.1); similar to 80C09_24 [Brassica rapa subsp. pekinensis] (GB:AAZ41835.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.452876822332906 -4.40832367212587 0.00115071828413001 1 5.37922867903439 10.2308207299135 -0.452876822332906 0.106140083206729 AT5G65060_at 4.99069109131787 4.83635472570022 4.96486800129081 5.40262269194196 5.64456921241816 5.42408463786365 4.76954635446366 5.10438163228567 4.89830778564741 4.80110001487711 5.44517745698355 5.44233616334404 5.37086736264879 5.16169649867076 5.4147617428043 5.62948938507844 5.32184736876545 5.10334561555034 4.74910722080308 0.138748504514169 0.148881513137194 0.151015705786192 0.138890315983993 0.148419535087664 0.146937685937967 0.139675653542495 0.14713329958716 0.148629595115403 0.142935717378344 0.138748504514169 0.144078246527690 0.143654053380007 0.142948795022990 0.140409941994121 0.142631052808203 0.138748504514169 0.138748504514169 0.147419995008898 5 0 / Inf -Inf NA 26004655 26008541 + gene protein_coding_gene TRUE FALSE AT5G65060.1|AT5G65060.2 MAF3 (MADS AFFECTING FLOWERING 3); transcription factor MADS domain protein - flowering regulator that is closely related to FLC similar to MAF1 (MADS AFFECTING FLOWERING 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77080.4); similar to 80C09_24 [Brassica rapa subsp. pekinensis] (GB:AAZ41835.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.452876822332906 -4.40832367212587 0.00115071828413001 1 5.37922867903439 10.2308207299135 -0.452876822332906 0.106140083206729 AT5G14660_at 8.69113505739376 8.61977769409139 8.6899546971456 8.84529893949678 9.15345441512189 8.80248629876458 9.26936327479029 9.4121555749523 9.0507623295269 8.86151400417275 9.57947825457947 9.97750006878762 9.7208247764332 9.86488186504313 9.79237162543685 9.9543687215071 9.48811766541781 9.7363082854255 8.86729543522252 0.120310308936880 0.116971165960485 0.120021338768453 0.117990296705005 0.130400717570671 0.117762020216181 0.115293874147984 0.118462247996986 0.131014587759737 0.113220109567137 0.116822547494857 0.114905070385154 0.117855766433360 0.114926073885031 0.120411386298083 0.113733622825776 0.123694290010713 0.122760826753211 0.11838875587383 5 5|0 -|/ 4727182 4728311 4727894.714 4726644 4728749 - gene protein_coding_gene TRUE TRUE AT5G14660.1|AT5G14660.2 PDF1B (PEPTIDE DEFORMYLASE 1B); peptide deformylase encodes a peptide deformylase-like protein Identical to Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) (PDF1B) [Arabidopsis Thaliana] (GB:Q9FUZ2;GB:Q8LEH0;GB:Q949U8;GB:Q9LYJ4); similar to PDF1A (PEPTIDE DEFORMYLASE 1A), peptide deformylase [Arabidopsis thaliana] (TAIR:AT1G15390.1); similar to Peptide deformylase, chloroplast precursor (PDF) (Polypeptide deformylase) (GB:Q9FV54); contains InterPro domain Formylmethionine deformylase; (InterPro:IPR000181) -0.400258520791552 -4.40636121623407 0.00115437659484425 1 5.37647980284502 18.2808309093710 -0.400258520791552 0.0719358006616183 AT5G03380_at 9.00187391994491 9.05133723173767 10.6283003693275 10.5382055323953 10.4811529647888 10.5335844383470 9.48744258875172 9.62201522152972 9.6327940904221 9.63275597309701 10.4442059643447 10.2819156239600 10.921543430225 10.5608951830624 9.45872565248202 10.7201039604556 10.5865838439596 10.5397770660660 9.653018901215 0.103896538192888 0.105972078683673 0.105180212558409 0.105183492699726 0.106255209843934 0.112572054330434 0.104485418691032 0.105280380979489 0.113814170454297 0.106319837729632 0.106102697170848 0.104563319726421 0.105216143039823 0.106113665660015 0.107637863075885 0.103293879458582 0.104882722149978 0.107125616094510 0.106599486972161 5 5 - 832430 832952 832664.727 832103 834411 - gene protein_coding_gene TRUE TRUE AT5G03380.1|AT5G03380.2 heavy-metal-associated domain-containing protein|metal ion binding similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36950.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53965.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.359330502605889 4.4061438647996 0.00115478252207861 1 5.37617531218133 19.9573599477599 0.359330502605889 0.0306763746520190 AT5G62950_at 5.79261935035355 5.44364311435382 6.66557259970251 6.4658565674592 7.9912407306552 6.6700012511747 4.37851233462321 4.67576146957331 4.30495770939268 4.0919040794771 6.44875993728794 6.4418174234663 6.06132684741681 5.94555749717451 5.48372658181636 6.6244389617623 5.51228654975388 5.9805593369206 4.95104250584938 0.273441811901644 0.267363684641231 0.278230858107386 0.273402135834082 0.267363684641231 0.275577429503041 0.280987200687358 0.268669872262700 0.280221598286909 0.281327362162847 0.276269611897183 0.267900240271186 0.267363684641231 0.273891849086854 0.26956678826021 0.267363684641231 0.280029107116583 0.268780373906109 0.280244301068642 5 5|0 -|/ 25279624 25280136 25279919.875 25279451 25281093 - gene protein_coding_gene TRUE TRUE AT5G62950.1|AT5G62950.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28956.1); similar to Hypothetical protein M106.7 [Caenorhabditis elegans] (GB:CAL36509.1); similar to Hypothetical protein CBG03003 [Caenorhabditis briggsae] (GB:CAE59596.1); similar to Os12g0488800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066791.1); contains InterPro domain HRDC-like; (InterPro:IPR010997); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28956.1); similar to Os12g0488800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066791.1); contains InterPro domain RNA polymerase II, RPB4; (InterPro:IPR006590) 0.747824630008376 4.3997730279593 0.00116674767748340 1 5.36724682990747 11.2662062139984 0.747824630008376 0.244473124735726 AT5G52110_at 4.91655632335774 5.27814871142399 6.2198921446376 6.14018588140055 6.90315778958235 6.2561080159068 5.66028345742546 4.82983116188526 4.06952394322805 4.40848879972239 6.03681474141775 6.25688742413515 6.11151702125098 6.23901107655532 6.42699677955148 6.21076897377903 6.30297732530259 6.00090763601588 4.08532869973327 0.266441951757516 0.256620746555522 0.254323055041796 0.259011461137558 0.263665557731470 0.256055726005502 0.254499216762474 0.264270852813779 0.259237318751209 0.260937977569789 0.251725899457361 0.259864258414588 0.251150170562830 0.259385221421772 0.25768073083907 0.256179459214806 0.261191886354970 0.258773755924279 0.255427200526923 5 5|0 -|/ 21189934 21190827 21190290 21188860 21191231 - gene protein_coding_gene TRUE TRUE AT5G52110.1|AT5G52110.2 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47906.2) 0.627402827024743 4.39322005491199 0.00117919100596180 1 5.35805606017601 10.9685282372753 0.627402827024743 0.193126722857166 AT5G22400_at 4.69956074909313 4.78180545359467 4.90579925643045 5.16402217977828 5.20239071126419 5.10160750408753 5.19821806353606 5.11898370259755 4.66490036342786 4.6402862737747 6.04648602480318 5.42304073441174 5.72999001124478 5.66438974834762 5.87538810550554 5.41292974623472 5.3897640349666 5.60527826715862 4.67602277423171 0.222178091823336 0.217771759401655 0.215572105036113 0.210427246379945 0.217661014017027 0.207851336450745 0.214695198998918 0.213051066292046 0.228487872087378 0.208936325315428 0.2171437268938 0.213025885091880 0.211894146157253 0.214918233483677 0.207851336450745 0.207851336450745 0.232866385692606 0.207851336450745 0.213127557566018 5 5 - 7423083 7423709 7423374.545 7422719 7425470 - gene protein_coding_gene TRUE TRUE AT5G22400.1 rac GTPase activating protein, putative similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT3G11490.1); similar to RhoGAP1 [Nicotiana tabacum] (GB:ABG85154.1); contains InterPro domain PAK-box/P21-Rho-binding; (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936); contains InterPro domain RhoGAP; (InterPro:IPR000198) -0.375330144176741 -4.38913102415131 0.00118702623312559 1 5.35231744634436 10.1734541881622 -0.375330144176741 0.0518813750142667 AT5G66890_at 2.16629728571616 2.48192127243063 4.15020289486561 4.42622778932586 2.37459565629009 2.29496976080113 1.67704378520988 1.790220803917 2.02158093532713 2.04116991060197 2.03472905619366 2.31634704317798 2.07362982804082 2.16737523064310 1.91873568544377 1.62826933500445 2.49845451676296 1.95816204381247 2.10760899404693 0.235429066767573 0.237821981620654 0.266336234571572 0.254720254970779 0.247207677238493 0.238177972703281 0.237647576460631 0.235429066767573 0.240675094440259 0.246532586752933 0.239031746634419 0.237740140803998 0.240387542159554 0.237006529204121 0.237764440289947 0.237194855560191 0.242599160747842 0.240859546376944 0.241582842488164 5 5 - 26730174 26730737 26730461.818 26730170 26731609 - gene protein_coding_gene TRUE TRUE AT5G66890.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g66890 [Arabidopsis Thaliana] (GB:Q9FKZ2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G66900.1); similar to Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABE88570.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.404346877871877 4.38518445996656 0.00119464039466215 1 5.34677614619772 4.73580963392466 0.404346877871877 0.0764105547985104 AT5G58380_at 6.4413999005242 6.97128759056534 7.32647631162005 7.35295315426357 7.42967143710452 7.05599090820794 6.93245865062276 6.99765197041661 6.83340099305005 6.94840571628232 7.82345748534844 7.88403692450737 7.88433256512706 7.44628580792379 7.68163865735873 7.77169995953765 7.39792599624603 7.5125792358876 7.28284598708398 0.207604766036642 0.210966190891208 0.210025298242334 0.220799086457187 0.210041654758895 0.224195380595701 0.224575098763669 0.231253601955538 0.235037102673679 0.207001296769482 0.222958247210009 0.216541379696955 0.209086526542028 0.217835544977955 0.209634316671098 0.211329978892620 0.223852712210808 0.212221884596475 0.212930802558279 5 5 - 23614380 23614883 23614660.818 23614188 23616468 - gene protein_coding_gene TRUE TRUE AT5G58380.1 CIPK10 (CBL-INTERACTING PROTEIN KINASE 10); kinase Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); similar to CBL-interacting protein kinase 14 [Populus trichocarpa] (GB:ABJ91221.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.462118611988597 -4.38409569995889 0.00119674997895192 1 5.3452469840706 14.4118839793144 -0.462118611988597 0.112866842631249 AT5G25130_at 3.8152074312733 3.40922917365044 5.85102268027686 5.63944438781234 5.69056614482954 5.35973780966135 5.73006824138486 5.7498555243506 5.9253934922169 5.95207694257873 6.3258265145526 5.16684384507939 5.97018931601931 6.6740522536959 5.19881015387085 6.21893194173196 6.21435313040181 6.24980057028705 5.69713737983775 0.220056485918191 0.21846640660615 0.167963032198841 0.163979874811923 0.163799887351437 0.165648626092714 0.172540237198943 0.166894881810818 0.165309248748586 0.166702325670322 0.163799887351437 0.164767005178040 0.163799887351437 0.165845447430576 0.169808032226865 0.165919593259573 0.170500868771304 0.167275553195856 0.169295050601935 5 5 + 8669567 8670059 8669780.909 8668302 8670197 + gene protein_coding_gene TRUE TRUE AT5G25130.1 CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B12 (EC 1.14.-.-) (CYP71B12) [Arabidopsis Thaliana] (GB:Q9ZU07); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25120.1); similar to CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25140.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.436163885001024 -4.38109922169286 0.00120257620939131 1 5.34103742154278 11.0859182094462 -0.436163885001024 0.0978061486137203 AT5G27230_at 0.648706548588284 0.772333810263549 1.19916624861182 1.15461606278375 1.19023550307186 1.50756545898382 0.786685941898393 0.898504911298505 0.707655378510983 1.28562756360943 1.47147493760330 1.25760211121106 1.43913688207923 1.34267313064617 1.03589405490670 1.74494327927577 1.66268394899443 1.40606487583656 0.973046301095 0.203588539387894 0.203588539387894 0.204599765013275 0.209751929142756 0.210254814006491 0.209616069875774 0.220120877224094 0.206818046503598 0.217884860417217 0.212338627649485 0.206501747517515 0.204636643052822 0.219838291199776 0.20740933271311 0.211430486968010 0.205774292350585 0.210976861340636 0.213399074982460 0.213656041743399 5 0|5 /|+ 9587440 9587785 9587591.9 9584095 9588052 + gene protein_coding_gene TRUE TRUE AT5G27230.1 similar to FRL2 (FRIGIDA LIKE 2) [Arabidopsis thaliana] (TAIR:AT1G31814.1); similar to ABI3-interacting protein 2; CnAIP2 [Chamaecyparis nootkatensis] (GB:AAP31312.1); contains InterPro domain Frigida-like; (InterPro:IPR012474) 0.386126475255612 4.37985441253118 0.00120500532521068 1 5.33928823154107 2.22414459417464 0.386126475255612 0.0625084852535754 AT5G42090_at 9.76072213290713 10.0413686854048 10.8409245755469 10.9730795166722 11.0378653907376 10.8668512690017 9.86078529070117 9.98419500111267 9.35281062369038 9.45967054164308 10.4829656115032 10.3487522856217 10.5251719777810 10.3480118243385 10.3121187758644 10.4855868126466 10.4515025770713 10.3605396323182 9.23827169977593 0.0963293989513342 0.0892547227396725 0.0959147395634342 0.0909291173564563 0.0921706579933838 0.092800311651533 0.0892547227396725 0.0892547227396725 0.108360422062824 0.0950195082686912 0.0909428822048768 0.0905494251878794 0.0910375006217324 0.098064739137117 0.0904386048169353 0.0892547227396725 0.0994656553927978 0.0931998644686122 0.0995061123257577 5 5 + 16844805 16845284 16845038.182 16843926 16845682 + gene protein_coding_gene TRUE TRUE AT5G42090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09570.1); similar to unknown [Sorghum bicolor] (GB:AAQ06259.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 0.388974372274844 4.37963699133412 0.00120543012895888 1 5.33898268776777 20.3030150538503 0.388974372274844 0.0649135407961862 AT5G22280_at 7.1465350752377 7.616235115096 8.60906056684528 8.3311355099147 9.12431701687742 8.38080104074438 7.17234340055016 7.24571812947891 6.00119118134646 5.9526592862945 8.33553238711207 8.3022544595243 8.07486574385511 8.2885576080196 7.19305742774101 8.64639463033024 7.3972540576652 6.29172709033623 6.18783749090243 0.289935234496348 0.281358144326914 0.288203336142968 0.294919273613267 0.290215630366719 0.300229816726515 0.286859348228264 0.290952451715482 0.31288276732943 0.296168025574964 0.281358144326914 0.282355635269850 0.291999779108071 0.289856898378962 0.295713129810388 0.281358144326914 0.327686735741703 0.309623735153730 0.293920329000508 5 5 - 7374235 7375091 7374633.091 7373998 7375722 - gene protein_coding_gene TRUE TRUE AT5G22280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44280.1); similar to Os07g0250300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059297.1); similar to Os03g0836500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051825.1); similar to unknown protein, 3'-partial [Oryza sativa (japonica cultivar-group)] (GB:AAO41143.1) 0.553188775087863 4.37512889439763 0.00121427374035249 1 5.33264566291943 14.8849856043868 0.553188775087863 0.160116280229636 AT5G02500_at 12.9560690723385 13.1203280414520 13.1599301238781 13.2408445245620 13.2301385674023 13.3725981254992 13.0467280883075 13.3227227919516 13.4623533125247 13.2876454318668 13.7175396416449 13.2778266860356 13.5003793515549 13.4084466496976 13.1739255677916 13.1948553332404 13.1210246492194 13.3124098312204 13.5103127278466 0.0496823445355929 0.0480075365614819 0.0480075365614819 0.048553563541611 0.0496067775249197 0.0539695399861312 0.0501747513015873 0.0494871971716474 0.0528025751231953 0.0487948298822707 0.0500346994955259 0.0484290284803744 0.0483682904981921 0.0493459311204524 0.0491568035512274 0.048051091984204 0.0541416707489308 0.0496916455641048 0.0480340637898234 5 5 - 554066 554598 554288.182 553743 556439 - gene protein_coding_gene TRUE TRUE AT5G02500.1 HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding encodes a member of heat shock protein 70 family. Identical to Heat shock cognate 70 kDa protein 1 (Hsc70.1) (HSC70-1) [Arabidopsis Thaliana] (GB:P22953;GB:Q9LZ52); similar to HSP70 (heat shock protein 70), ATP binding [Arabidopsis thaliana] (TAIR:AT3G12580.1); similar to heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) [Arabidopsis thaliana] (TAIR:AT3G09440.1); similar to heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) [Arabidopsis thaliana] (TAIR:AT5G02490.1); similar to heat shock protein 70-3 [Nicotiana tabacum] (GB:AAR17080.1); similar to heat shock cognate protein 70 [Thellun (GB:AAS09825.1); similar to heat shock cognate protein HSC70 [Brassica napus] (GB:AAB88009.1); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) -0.385320112171312 -4.37221828982671 0.00122001973290412 1 5.32855244812639 26.5603723108639 -0.385320112171312 0.0623947747546762 AT5G45810_at 1.94667799822865 2.52213142297373 2.86716405220428 3.27659383161834 2.21197942573431 2.33346038610258 2.6793435535663 2.61844512416104 2.90226485945371 2.73365270512378 1.65943587054369 1.85669371980307 2.65294246981936 2.49879154119444 2.00826962743573 2.64728387661982 2.57926417399472 2.56363157421888 3.07271006956165 0.198670456423673 0.197424585725626 0.199500084070921 0.21154985543342 0.198448877121290 0.19979502510696 0.195900681676365 0.200751632211609 0.199163686688980 0.197900716798767 0.197973093583110 0.195900681676365 0.196571561381631 0.195900681676365 0.198735649287961 0.197927847192845 0.200052669627389 0.201111833205221 0.195900681676365 5 5 + 18603101 18603544 18603265.727 18602169 18603620 + gene protein_coding_gene TRUE TRUE AT5G45810.1 CIPK19 (CIPK19); kinase Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.5), which has also been reported as a member of the CBL-interacting protein kinases (CIPK19). similar to CIPK12 (CIPK12), kinase [Arabidopsis thaliana] (TAIR:AT4G18700.1); similar to CIPK18 (CIPK18), kinase [Arabidopsis thaliana] (TAIR:AT1G29230.1); similar to putative serine-threonine kinase [Gossypium hirsutum] (GB:AAT64036.1); similar to CBL-interacting protein kinase 19 [Populus trichocarpa] (GB:ABJ91226.1); similar to CBL-interacting protein kinase 18 [Populus trichocarpa] (GB:ABJ91225.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.481894599659659 -4.37165280770859 0.00122113939561680 1 5.327757042327 5.1625569666987 -0.481894599659659 0.124460552168691 AT5G02570_at 2.59769875100335 2.85856676360826 3.12916800215182 3.05966161794490 2.12363530322605 2.49914652955654 2.67330104384085 2.98962983478876 3.73172234245861 3.53112171751907 3.43265349599264 3.83757258271411 3.34571005588749 3.42169458214533 4.02643553096308 3.36406246953107 3.31050894266091 3.8494628074659 3.00064905381371 0.209090426777214 0.222703428876884 0.211999503956844 0.209090426777214 0.211947107274604 0.211958782844653 0.214363484911671 0.219020069993364 0.213968988772832 0.209942278890981 0.212701667682924 0.213215442053336 0.212756412451682 0.211158123188389 0.216049096985080 0.214526237302876 0.218771899925982 0.212903257000320 0.217502467352941 5 5 - 576754 577082 576873.273 576740 577138 - gene protein_coding_gene TRUE TRUE AT5G02570.1 histone H2B, putative Identical to Putative histone H2B.9 (HTB10) [Arabidopsis Thaliana] (GB:Q9LZ45); similar to histone H2B, putative [Arabidopsis thaliana] (TAIR:AT3G53650.1); similar to Probable histone H2B.3 (GB:Q1SU99); similar to Probable histone H2B.1 (GB:Q1S9I9); similar to Histone H2B.2 (LeH2B-2) (GB:O65818); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124); contains InterPro domain Histone H2B; (InterPro:IPR000558) -0.4337506272975 -4.37052647363864 0.00122337277250503 1 5.32617258636635 6.238689445607 -0.4337506272975 0.0969655784753756 AT5G41520_at 10.8534250429103 10.8485384657300 10.9864294483353 10.8526892951465 11.1076085497807 11.0529861302484 10.6082223338963 10.7420451107331 10.9984425444152 10.7823772870713 11.118787023358 11.3268738731301 11.0481152183314 11.0801504203826 11.4646320419420 10.8984711216389 10.8039923941301 11.0346097210237 10.8611796957204 0.0761797201865525 0.0737702997662735 0.0774271062297864 0.0793488360022516 0.0739636219727085 0.0779943686129317 0.0755416187483764 0.0752828509872343 0.0809384559345014 0.075313707505166 0.0737702997662735 0.0749663315442014 0.0737702997662735 0.0778123201076835 0.0792122402097395 0.0742073730359609 0.0805351751175876 0.0745324763795105 0.0771472261699501 5 5 - 16626605 16627659 16627168.909 16626381 16627920 - gene protein_coding_gene TRUE TRUE AT5G41520.1|AT5G41520.2 40S ribosomal protein S10 (RPS10B) Identical to 40S ribosomal protein S10-2 (RPS10B) [Arabidopsis Thaliana] (GB:Q9FFS8); similar to 40S ribosomal protein S10 (RPS10A) [Arabidopsis thaliana] (TAIR:AT4G25740.1); similar to 40S ribosomal protein S10-like [Solanum tuberosum] (GB:ABB55398.1); contains InterPro domain Plectin/S10, N-terminal; (InterPro:IPR005326); contains InterPro domain Fe-only hydrogenase, small subunit; (InterPro:IPR008953)|Identical to 40S ribosomal protein S10-2 (RPS10B) [Arabidopsis Thaliana] (GB:Q9FFS8); similar to 40S ribosomal protein S10 (RPS10A) [Arabidopsis thaliana] (TAIR:AT4G25740.1); similar to 40S ribosomal protein S10-like [Solanum tuberosum] (GB:ABB55361.1); contains InterPro domain Plectin/S10, N-terminal; (InterPro:IPR005326) -0.358601964336009 -4.36984743886788 0.00122472128586372 1 5.32521726186336 21.8703032900031 -0.358601964336009 0.0340888923962685 AT5G48370_at 6.87868768945593 7.16708701133145 7.79830376409077 7.73195984652396 7.8344859609529 7.79460897794029 6.34560468022387 6.66850279200062 5.55044532499092 5.62890305842167 7.75970567278665 7.24560342790842 7.08616762019512 7.66999670930473 7.11202775055889 7.4126193502244 7.35709331822018 7.37319295379308 5.37899543294307 0.180443076724426 0.181464226752789 0.182884430023633 0.185663155850442 0.180175588282784 0.184940206657587 0.180025513624076 0.178406224939763 0.207997904434197 0.192680496557072 0.181790855075889 0.173653694778405 0.178221317948411 0.173653694778405 0.180477180602509 0.179777646736044 0.175055503222683 0.182407212194465 0.186407043989406 5 5 - 19615951 19616656 19616363.545 19615749 19617870 - gene protein_coding_gene TRUE TRUE AT5G48370.1|AT5G48370.2 thioesterase family protein similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT2G30720.1); similar to Thioredoxin/protein disulfide isomerase (ISS) [Ostreococcus tauri] (GB:CAL54247.1); similar to Os09g0517700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063681.1); contains domain Thioesterase/thiol ester dehydrase-isomerase (SSF54637); contains domain ACYL-COA THIOESTERASE (PTHR12655); contains domain no description (G3D.3.10.129.10) 0.402513079769677 4.36974601434119 0.0012249228416189 1 5.32507456259256 13.7256544848945 0.402513079769677 0.0761104265457166 AT5G13960_at 2.44781648000303 2.55701697133615 3.29360969161955 3.4973074422379 3.09290135369072 2.72799635867642 2.54284524352471 2.34656690541404 2.21993210648138 2.32550182706346 2.85119271089336 3.08150304858645 3.28020804665888 3.61165409993207 3.45853042457643 3.1563900085898 3.24579398613080 2.98809118767032 2.46843043523883 0.189268827019433 0.193354722309435 0.198211034461228 0.196503673777469 0.187466965562454 0.207721421992770 0.191053053614064 0.194830083735309 0.192563904183056 0.201047111268123 0.192726133509688 0.190318116797676 0.192084543963544 0.187466965562454 0.194225938593944 0.188638266292616 0.197895754006297 0.191779856061043 0.193976256053151 5 5|0 +|/ 4505020 4505932 4505626.875 4501449 4506190 + gene protein_coding_gene TRUE TRUE AT5G13960.1 SUVH4 (SU(VAR)3-9 HOMOLOG 4) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and this subfamily of the SET proteins have an additional conserved RING finger motif called YDG domain. In kyp mutants, there is a loss of CpNpG methylation. Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4) (Suppressor of variegation 3-9 homolog protein 4) (Su(var)3-9 homolog protein 4) (Protein KRYPTONITE) (Protein SET DOMAIN GROUP 33) (SUVH4) [Arabidopsis Thaliana] (GB:Q8GZB6;GB:Q9C5P3;GB:Q9FFX9); similar to SUVH6 (SU(VAR)3-9 homolog 6) [Arabidopsis thaliana] (TAIR:AT2G22740.1); similar to putative SUVH4 [Oryza sativa (japonica cultivar-group)] (GB:BAB89674.1); similar to Os01g0927000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045266.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain Pre-SET; (InterPro:IPR007728) 0.410666308610840 4.36694678228942 0.00123049939291803 1 5.32113551298245 5.58682017017497 0.410666308610840 0.082104975466351 AT5G16790_at 2.58387723809112 2.29980936665206 2.85247415683104 3.12004679761900 3.45433563971499 3.39405997393777 2.72443418174817 2.56461861000557 2.4862891048988 2.22402039679763 3.11749294931167 3.32334291715885 3.52066433835264 3.138926052547 2.96229602265945 3.23011634094959 2.76473555500417 3.54620369070512 2.25001114520388 0.196156350897174 0.202479667538428 0.206198464415388 0.204956663364892 0.204763034264346 0.205486632138254 0.205470193003518 0.203711127924752 0.213746496155845 0.203921339702053 0.197767200079155 0.196156350897174 0.204250058881878 0.203354636118592 0.204349348526604 0.198945336399471 0.200143093780643 0.204202876353066 0.201707635969753 5 5 - 5522645 5523334 5523083.909 5522499 5523966 - gene protein_coding_gene TRUE TRUE AT5G16790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02950.1); similar to RIKEN cDNA 1500006O09, related [Solanum demissum] (GB:AAT40503.2); contains InterPro domain Protein of unknown function DUF783; (InterPro:IPR008501) 0.39867710933668 4.36307120255189 0.00123826429606753 1 5.31567970758122 5.63449655339305 0.39867710933668 0.0737188181819714 AT5G19810_at 4.10288717124391 4.32071635556200 4.14085912546685 4.34295185344014 3.50314504204162 4.62162248988109 3.51030804725264 4.76201170644159 4.18339903025528 4.9231973995165 4.59368978145885 4.56018127786588 4.55637715904005 4.33388326328034 4.85043867407667 4.82653563492576 4.38853429056627 4.63190706771286 4.83247671601207 0.212668226959742 0.21758209147819 0.217517210794937 0.217551317310032 0.221040741371490 0.216891055108897 0.230450136399691 0.253668215068833 0.222437119758793 0.214159925810597 0.216302976686192 0.211659850616324 0.213308397198468 0.212167376692392 0.213955537386681 0.213407237802444 0.229595681754033 0.214744671791262 0.211741829678965 5 5 + 6693604 6693773 6693682 6693054 6693803 + gene protein_coding_gene TRUE TRUE AT5G19810.1 proline-rich extensin-like family protein similar to proline-rich extensin, putative [Arabidopsis thaliana] (TAIR:AT1G26250.1); similar to putative membrane protein [Emiliania huxleyi virus 86] (GB:YP_294122.1); contains InterPro domain Extensin-like region; (InterPro:IPR006706) -0.86371060927169 -4.36262422418354 0.00123916314418242 1 5.315050319574 8.78258827835479 -0.86371060927169 0.295008457125942 AT5G62200_at 8.60452529366098 8.73240401495393 9.29432948277988 9.72908162112166 9.7610676032431 9.25070044160331 7.64568549702988 7.93900083790019 6.6901645553429 7.20943237469501 8.1315548534858 8.05913906372069 8.54345656693575 8.48828054230917 8.56931319826882 8.40140887189227 8.58673695363206 8.10413369398617 6.82523962324539 0.19875781511631 0.198843118101658 0.208494724906499 0.201600757448931 0.200231542179747 0.211505008351268 0.195163334566633 0.193132270527047 0.215991870966165 0.217426653628483 0.200334039866672 0.208070092622967 0.193132270527047 0.207850651327886 0.201730675198467 0.193986161257049 0.197537674633179 0.201102470003692 0.232444633887684 5 5|0 -|/ 25001709 25002829 25002132.4 25001462 25002937 - gene protein_coding_gene TRUE TRUE AT5G62200.1 embryo-specific protein-related similar to embryo-specific protein-related [Arabidopsis thaliana] (TAIR:AT2G41470.1); similar to Embryo-specific 3 [Medicago truncatula] (GB:ABE79354.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976); contains InterPro domain Embryo-specific 3; (InterPro:IPR010417) 0.488578142618541 4.36247293221294 0.00123946753904432 1 5.31483727865774 16.5039902585983 0.488578142618541 0.128558874698292 AT5G05740_at 7.4988039590341 7.34015216729165 7.51570983535612 7.39401001137627 8.35877608504321 7.63232997439087 8.28588506114732 8.11790902428625 7.73819254102617 8.10716489235256 8.80143156366592 9.2242710141994 8.72267503251327 8.57668793256748 9.11703690087154 8.9122964906534 8.23944515817389 8.7285023929596 7.80386998407201 0.191845474686972 0.193565433435995 0.200016410749569 0.196064887393687 0.190550512962577 0.19415277662652 0.194330137849747 0.181145095354521 0.186170453931071 0.181145095354521 0.186500678569519 0.195189992201769 0.191851375513780 0.197674172423087 0.198817293267935 0.183251387570984 0.198277380569227 0.181145095354521 0.182913729073623 5 5 - 1724049 1724781 1724430.545 1723837 1727015 - gene protein_coding_gene TRUE TRUE AT5G05740.1|AT5G05740.2 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442?454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171?179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria. similar to EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1), sterol regulatory element-binding protein site 2 protease [Arabidopsis thaliana] (TAIR:AT5G35220.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61067.1); similar to Os01g0142100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041989.1); contains InterPro domain Peptidase M50; (InterPro:IPR008915) -0.497831188310043 -4.35927398499157 0.00124592215362746 1 5.31033181792075 16.1046315729995 -0.497831188310043 0.133591154667235 AT5G54110_at 8.07823553612994 8.12807118168409 8.92665941478879 8.83249115668038 8.96677373793514 8.26711248120266 8.80013162349315 8.6199656546745 8.38585481606075 8.44236010391101 9.20895661669872 8.90461161063245 8.85426007844765 9.0844618303178 8.42520023317267 9.15183394343156 7.53686766737668 8.65978823113267 8.28491348460144 0.176336964616118 0.173330796008948 0.170190832951444 0.173024374023761 0.17069863861069 0.202170087104113 0.171411335715802 0.178004119973295 0.195024345892082 0.188872497970427 0.169925098494832 0.168680218379908 0.169971134962429 0.178279360711845 0.172195404484084 0.170306266390712 0.238452083910954 0.170777718572646 0.184583408754203 5 5|0 +|/ 21975806 21977541 21977005.125 21975440 21977827 + gene protein_coding_gene TRUE TRUE AT5G54110.1 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking. similar to vesicle-associated membrane family protein / VAMP family protein [Arabidopsis thaliana] (TAIR:AT4G21450.1); similar to Os08g0141300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060972.1); similar to Major sperm protein [Medicago truncatula] (GB:ABD32337.1); contains InterPro domain PapD-like; (InterPro:IPR008962); contains InterPro domain Major sperm protein; (InterPro:IPR000535) -0.483880893398561 -4.35713075142568 0.00125026637513428 1 5.30731230377818 17.1270752622864 -0.483880893398561 0.126381680330584 AT5G13260_at 7.29801603625624 7.61907844256946 7.53681347461981 7.7065481926043 7.73366324781144 7.24897166148466 7.11812583345152 7.31204168731881 7.87399507079335 7.59178905516543 8.75198621959702 9.11478777361008 8.14956772367317 8.66327531205519 8.66657945752663 8.47679034021496 7.1572844947855 8.64448620278238 7.57401020682677 0.225779905315893 0.220974722400228 0.219564022201874 0.216067342570306 0.216067342570306 0.236224624919032 0.235647781465228 0.230169271211026 0.23558919410520 0.220937699653991 0.217231515215423 0.222861237778123 0.224375761727528 0.221759312863508 0.219376579242406 0.224860933379713 0.249017759024723 0.232581718543329 0.216375566741459 5 5 + 4245519 4246647 4246160.75 4243031 4246881 + gene protein_coding_gene TRUE TRUE AT5G13260.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48860.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93965.1); similar to Os01g0928100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045273.1) -0.454318261064998 -4.35684636980071 0.00125084399670405 1 5.30691159339322 15.5131703894108 -0.454318261064998 0.110052457992941 AT5G58980_at 6.34768645041122 5.78962093756304 8.04559312338871 7.77883282195006 8.06603652592186 7.76019966121337 6.36416578344532 6.33964101083564 6.20253192424528 6.88202451589881 8.12649073270574 7.86731313528226 7.5349771904422 7.9572824703358 7.4164412133531 8.23143857485286 8.19612766320872 7.56906156997082 6.64690916992004 0.209537420472043 0.202437557727938 0.209391083300334 0.199843549623928 0.209744361902121 0.205156648852520 0.203574891331913 0.216736566512679 0.211396361244699 0.209074196046948 0.205161880509996 0.203486196133220 0.211747190360436 0.207056177691417 0.206248532039230 0.208152470776822 0.215340604179968 0.205676413917612 0.212152120016332 5 5 - 23828680 23829199 23828873.545 23828675 23831621 - gene protein_coding_gene TRUE TRUE AT5G58980.1 ceramidase family protein similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT1G07380.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.1); similar to Os01g0624000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043618.1); similar to Neutral/alkaline nonlysosomal ceramidase [Medicago truncatula] (GB:ABE89511.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase; (InterPro:IPR006823) 0.470967514494767 4.35551329479059 0.00125355541180067 1 5.30503303537592 14.2812454254030 0.470967514494767 0.119487425402029 AT5G04720_at 9.29251232550605 9.47959373048305 10.5451680057651 10.5638740578689 10.2113188095410 10.1748916435342 8.55973239539909 8.75229050745815 8.08788464965327 7.75680974890444 8.87410950552862 8.35333054575351 8.7445263666953 8.37630212064515 8.22745250862591 8.82966008012178 8.78944897274585 8.69464331190828 7.13165536954066 0.196834891701477 0.192941566609043 0.195983298537659 0.196500634139298 0.195496989933952 0.197399925602025 0.185798513150876 0.188521253211922 0.211531632919982 0.198515479001052 0.186740293181508 0.185798513150876 0.194515024023243 0.198710341365368 0.193375810804461 0.185798513150876 0.206536438777147 0.197758707115119 0.212147718854582 5 5 + 1363071 1363638 1363347.455 1360713 1363885 + gene protein_coding_gene TRUE TRUE AT5G04720.1 ADR1-L2 (ADR1-LIKE 2); ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding Identical to Probable disease resistance protein At5g04720 [Arabidopsis Thaliana] (GB:Q9LZ25); similar to ADR1 (ACTIVATED DISEASE RESISTANCE 1) [Arabidopsis thaliana] (TAIR:AT1G33560.1); similar to ADR1-L1 (ADR1-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT4G33300.2); similar to ADR1-L3 (ADR1-LIKE 3), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT5G47280.1); similar to Probable disease resistance protein At4g33300 (GB:Q9SZA7); similar to Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABE81238.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.367037673625021 4.34675574106624 0.0012715221325889 1 5.29268471037076 17.8324064007124 0.367037673625021 0.0469979425051054 AT5G50300_at 2.32223724762723 2.11140472662004 2.17351128674599 2.43050857125836 2.04717965804800 2.03397700665307 2.19261802395502 1.90432885692152 2.62183070358077 2.46221704659352 1.56828019550986 1.93790881952526 1.88154479395810 2.11396848018058 1.75334343048436 2.27636280878264 2.13604246128645 2.39252527788915 2.22906792331871 0.225194131153838 0.222560847014920 0.220748065567932 0.226860181075358 0.225412883583402 0.230925967866724 0.223358679518288 0.235819665304724 0.233722404367842 0.224401775041613 0.221177234472437 0.224056180423728 0.238205868102651 0.221013903607765 0.220748065567932 0.230357228067181 0.233249725662641 0.230102620137939 0.223388163385393 5 5 - 20483866 20484260 20484063.182 20483294 20485350 - gene protein_coding_gene TRUE TRUE AT5G50300.1 xanthine/uracil/vitamin C permease family protein similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT3G10960.1); similar to hypothetical protein CIMG_03715 [Coccidioides immitis RS] (GB:XP_001244274.1); similar to Os11g0427700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067781.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) -0.400145507588045 -4.3430180904744 0.00127927236644901 1 5.2874107191722 4.37457180120351 -0.400145507588045 0.0761800133887867 AT5G23760_at 7.32371545595712 6.98778063521538 8.1228469052528 7.9056606715258 7.89110992836414 7.47584125718096 7.60141732523548 7.46575643250499 7.20408253212057 7.55260224943699 8.14085792121463 8.09039319985568 7.92186561774335 8.1042873086442 7.16854738390634 8.20311868964795 8.0637322271597 7.66693442237832 7.35249760990579 0.141203588194328 0.142340610858266 0.145015008401006 0.144716163603686 0.142679301683664 0.14380345286822 0.148183583154385 0.145527453984484 0.157744371716131 0.14327222084491 0.141203588194328 0.145104503595690 0.145453699281361 0.146313362556686 0.150947770511082 0.141698817329588 0.151655325487886 0.165257011425975 0.145909559183579 5 5|0 -|/ 8013332 8014020 8013586.667 8013088 8014231 - gene protein_coding_gene TRUE TRUE AT5G23760.1 heavy-metal-associated domain-containing protein similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT1G01490.2); similar to heavy-metal-associated domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93600.1); similar to heavy-metal-associated domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66176.1); similar to Os10g0506100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065011.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.439544184650102 -4.3378197634129 0.00129013400281295 1 5.2800718452727 15.2416133564745 -0.439544184650102 0.102508271088859 AT5G53220_at 2.04660890855376 2.04118286088579 2.86097445194519 3.03269732361505 3.06520625702181 2.75940208836167 1.89587603046903 1.59787377098527 2.49540936798727 2.05281585542482 2.93940502295074 3.04154576176543 2.58203857056329 2.54864892646103 2.25424824306777 2.59007534073358 2.8130315509259 2.17151453224863 2.40078466566140 0.199773620979002 0.200324818281791 0.214492906751532 0.204692793922004 0.211461775179636 0.209219616961411 0.206477288522562 0.203412461371342 0.208321941454419 0.207222965082488 0.205432809808134 0.199773620979002 0.200994645578858 0.204681858440795 0.202880510461208 0.204248412909625 0.210246999940702 0.206751565217898 0.21003543765881 5 5|0 +|/ 21614578 21615195 21614970.2 21613216 21615450 + gene protein_coding_gene TRUE TRUE AT5G53220.1|AT5G53220.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to OSJNBb0076A22.19 [Oryza sativa (japonica cultivar-group)] (GB:CAD40807.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72405.1); similar to Os01g0221300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042431.1) 0.404158723012782 4.33469219168244 0.00129671554059219 1 5.27565428445419 4.87942777312005 0.404158723012782 0.0796502251557117 AT5G40660_at 5.69198572835761 5.92946510258259 6.50246420654756 6.42054092956004 6.61683812889145 5.87275852565182 5.66692563146185 5.99799686039713 5.04295342350196 4.82707576843451 5.20365720416179 5.07621521610896 5.32205304566979 5.20143511629631 5.37616838221123 5.17042260355774 5.14254108053085 5.22630533804774 4.56840446768794 0.254354854668057 0.24954793175986 0.257301367820902 0.257001924355558 0.253024379062982 0.264165753613336 0.247199351820452 0.252841290566260 0.256756637765592 0.246303962956301 0.245687591224776 0.251183806694074 0.251265431620819 0.253930996745487 0.245687591224776 0.248262279544928 0.253325685826616 0.245687591224776 0.2493209646537 5 5 - 16300881 16301987 16301262.273 16300736 16302554 - gene protein_coding_gene TRUE TRUE AT5G40660.1 ATP12 protein-related similar to F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri] (GB:CAL57693.1); similar to Os07g0644000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060445.1); contains InterPro domain ATP12 ATPase; (InterPro:IPR011419) -0.521718586144846 -4.32985511801978 0.00130696402548365 1 5.26881897809759 11.1012023732802 -0.521718586144846 0.147489941813021 AT5G39510_at 10.1279525623191 10.1758670184610 10.8422531217962 11.0218895825035 10.9905382350308 10.7344721079192 9.85885800157079 9.96757947836563 9.88367967166344 9.40429260739726 10.8105628729721 10.6054654197565 10.7105814314973 10.7114522094593 10.6610934516904 10.6946475638935 10.622267006968 10.7038281200134 9.2780926188768 0.09417245900447 0.0937061970994935 0.102059763226013 0.0931460121283023 0.0983574958073216 0.100008051433783 0.0959603723051134 0.0935679927608525 0.101011715755691 0.101377657881150 0.0931460121283023 0.0933542305467688 0.0961252793945988 0.0951749422840632 0.0959336664001082 0.0931460121283023 0.0978463843683556 0.095742091380826 0.102317052697263 5 5|0 +|/ 15839331 15840764 15840241.3 15838671 15841068 + gene protein_coding_gene TRUE TRUE AT5G39510.1 VTI11 (VESICLE TRANSPORT V-SNARE 11, vesicle transport v-SNARE 11); receptor Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Identical to Vesicle transport v-SNARE 11 (AtVTI11) (Vesicle transport v-SNARE protein VTI1a) (Vesicle soluble NSF attachment protein receptor VTI1a) (AtVTI1a) (VTI11) [Arabidopsis Thaliana] (GB:Q9SEL6;GB:Q9FLY4); similar to VTI13 (vesicle transport v-SNARE 13), SNARE binding / receptor [Arabidopsis thaliana] (TAIR:AT3G29100.1); similar to Vesicle transport v-SNARE [Medicago truncatula] (GB:ABE86759.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) 0.376046131648224 4.32422418580405 0.00131900174236294 1 5.26085705412024 20.5709307095843 0.376046131648224 0.0579036028148341 AT5G13520_at 2.91272537298035 2.99125243508877 3.79677360893669 3.51232497524859 3.03664853370858 3.26314734876071 2.57120929913928 2.72803418274709 2.76894586347393 3.3867881784311 4.33941248634937 5.32917425937497 3.95196150092498 4.10295394606775 5.16816084944456 4.61314044671186 4.66169649291486 4.77894461515727 3.55717661555026 0.219232351503482 0.212880106751145 0.220524002272304 0.212880106751145 0.221819790431286 0.217008284114803 0.224612256695826 0.223420560004231 0.221236257903823 0.220565640001123 0.234448122732625 0.229160814431894 0.219283765276567 0.213390120621515 0.224229997995247 0.216385730587422 0.227102631317799 0.220306826992170 0.221740071577734 5 5|0 -|/ 4342122 4343022 4342474.3 4341951 4344674 - gene protein_coding_gene TRUE TRUE AT5G13520.1 peptidase M1 family protein similar to APM1 (Aberrant peroxisome morphology 1) [Arabidopsis thaliana] (TAIR:AT4G33090.1); similar to leukotriene A-4 hydrolase (LTA-4 hydrolase) (LeukotrieneA(4) hydrolase) [Stigmatella aurantiaca DW4/3-1] (GB:ZP_01462436.1); similar to Os03g0819100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051710.1); contains InterPro domain Peptidase M1, membrane alanine aminopeptidase; (InterPro:IPR001930) 0.389674454667786 4.31903555506105 0.00133019701375745 1 5.25351595291886 7.02942319979457 0.389674454667786 0.0698620803376085 AT5G41070_at 1.57632893310350 1.68078742743661 1.67135257126651 1.29331199816027 1.69894349633994 1.66268041142444 2.98942900108516 2.47027000348256 3.37768660942432 2.98891024670054 4.44197301252659 5.21285488252195 2.72402404322032 3.64257763591386 4.43149551442705 2.21316183594555 1.86532123254986 3.61563378385585 3.25831867246932 0.248780997326332 0.245308316848651 0.248799032799252 0.250491521300769 0.243619010072750 0.241358094626757 0.244463668173682 0.241358094626757 0.251267103614088 0.247645365676880 0.249786940474567 0.254921977965086 0.244713944857945 0.257425034823127 0.261250843984114 0.246448374438347 0.247414171708322 0.246445784716162 0.241358094626757 5 5 + 16456635 16457034 16456880.818 16455535 16457274 + gene protein_coding_gene TRUE TRUE AT5G41070.1 DRB5 (DSRNA-BINDING PROTEIN 5); double-stranded RNA binding Encodes a double-stranded RNA binding protein. similar to DRB3 (DSRNA-BINDING PROTEIN 3), double-stranded RNA binding [Arabidopsis thaliana] (TAIR:AT3G26932.2); similar to Double-stranded RNA binding [Medicago truncatula] (GB:ABE80978.1); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) -0.455016071895968 -4.31825891834254 0.00133188129411228 1 5.25241675625909 5.24373068969647 -0.455016071895968 0.112773674907583 AT5G37480_at 6.96396500907276 7.19793718232008 8.16566389916636 8.08854052398716 7.99934229376971 7.35426095418243 5.76602440764731 5.6387951561404 6.35138736662555 4.96276891896645 7.2909992010329 7.64280919059998 6.39317078017072 7.57243399329456 6.50294708300377 6.96808376943608 6.72553039561404 6.69237085147709 5.04914732256205 0.259918532905791 0.255843508831564 0.260235348880241 0.25961635720662 0.277663383657145 0.263982965134191 0.266124261242514 0.261806482540517 0.263019890885246 0.284279557835661 0.260203865311858 0.257309084283806 0.258660013983105 0.266775780665144 0.255536130161297 0.251708187376770 0.262275985409579 0.271440144361103 0.269072752776331 5 0|5 /|- 14901710 14902553 14902089 14901561 14903199 - gene protein_coding_gene TRUE TRUE AT5G37480.1 similar to Os03g0748600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051270.1) 0.47046679894332 4.31700561994535 0.00133460402802986 1 5.25064271941411 13.3608050253508 0.47046679894332 0.121509541964155 AT5G02180_at 7.18502675118552 7.38810830244352 7.7679755848296 7.75211604141512 8.97687338441432 8.11503327694138 9.17677406580524 8.98612120393748 8.34350065940489 8.38558443986015 8.92417921556317 8.8840185123848 9.3184158757979 9.33345989682838 8.34527285352743 9.29429673961905 8.86344649265999 8.78267447024647 8.18361642592381 0.180884767916269 0.171826935354416 0.169340978601383 0.174828118712870 0.174699291006691 0.189505345436723 0.174392325953447 0.175187520587642 0.179609654863532 0.173481914726623 0.174070304786689 0.171832201810872 0.177017466655882 0.173379443849536 0.186355821338246 0.171428699281499 0.178627227449568 0.182554660780109 0.175287521373557 5 5|0 +|/ 432529 433489 432907 430875 433739 + gene protein_coding_gene TRUE TRUE AT5G02180.1 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G09330.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G09340.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G02170.1); similar to Os12g0574000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067099.1); similar to Os02g0101000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045585.1); similar to Amino acid/polyamine transporter II [Medicago truncatula] (GB:ABE87832.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -0.537879427533978 -4.3084735537434 0.00135329557225987 1 5.23855884189864 16.8047307507755 -0.537879427533978 0.156765990104388 AT5G58140_at 10.5931163303555 10.4562920697542 10.9742813465255 10.9190780307893 11.1928843091134 10.9327425793051 11.3172645399687 11.0330592778705 10.9678039052810 11.1226036884276 11.2260048113640 11.3506726495458 11.3570566095696 11.2620629289513 11.0900557578871 11.4513405467247 11.2613055936631 11.2920760769343 11.1194280355192 0.0689859375579143 0.0671258962580378 0.0704110577076702 0.0699030094553048 0.0692705870277589 0.072407426547808 0.068237935749795 0.0688271849826128 0.0790219369967672 0.0714866065792528 0.0683678329163788 0.0673816700831595 0.0708492906647039 0.0713646795367189 0.0674794128292424 0.0689687025235163 0.0746502562066577 0.0710402077097629 0.0690483527916509 5 5|0 +|/ 23546215 23547193 23546597.5 23541653 23550337 + gene protein_coding_gene TRUE TRUE AT5G58140.1|AT5G58140.2|AT5G58140.3|AT5G58140.4 PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Identical to Phototropin-2 (EC 2.7.11.1) (Defective in chloroplast avoidance protein 1) (Non phototropic hypocotyl 1-like protein 1) (NPH1-like 1) (AtKin7) (PHOT2) [Arabidopsis Thaliana] (GB:P93025;GB:O81204;GB:Q8RWE6); similar to PHOT1 (phototropin 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45780.2); similar to phototropin [Phaseolus vulgaris] (GB:BAD89968.1); similar to nonphototrophic hypocotyl 1b [Oryza sativa (japonica cultivar-group)] (GB:BAA84779.1); similar to phototropin-2 [Lycopersicon esculentum] (GB:ABI48276.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PAS-associated, C-terminal; (InterPro:IPR000700); contains InterPro domain PAS fold; (InterPro:IPR013767)|Identical to Phototropin-2 (EC 2.7.11.1) (Defective in chloroplast avoidance protein 1) (Non phototropic hypocotyl 1-like protein 1) (NPH1-like 1) (AtKin7) (PHOT2) [Arabidopsis Thaliana] (GB:P93025;GB:O81204;GB:Q8RWE6); similar to PHOT1 (phototropin 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45780.2); similar to phototropin [Phaseolus vulgaris] (GB:BAD89968.1); similar to nonphototrophic hypocotyl 1b [Oryza sativa (japonica cultivar-group)] (GB:BAA84779.1); similar to phototropin-2 [Lycopersicon esculentum] (GB:ABI48276.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PAS-associated, C-terminal; (InterPro:IPR000700); contains InterPro domain PAS fold-3; (InterPro:IPR013655)|Identical to Phototropin-2 (EC 2.7.11.1) (Defective in chloroplast avoidance protein 1) (Non phototropic hypocotyl 1-like protein 1) (NPH1-like 1) (AtKin7) (PHOT2) [Arabidopsis Thaliana] (GB:P93025;GB:O81204;GB:Q8RWE6); similar to PHOT1 (phototropin 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45780.2); similar to phototropin [Phaseolus vulgaris] (GB:BAD89968.1); similar to nonphototrophic hypocotyl 1b [Oryza sativa (japonica cultivar-group)] (GB:BAA84779.1); similar to phototropin-2 [Lycopersicon esculentum] (GB:ABI48276.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain PAS-associated, C-terminal; (InterPro:IPR000700); contains InterPro domain PAS fold-3; (InterPro:IPR013655) -0.389926895799495 -4.30023284207201 0.00137160989976566 1 5.22687639110563 22.1054733512466 -0.389926895799495 0.0713972947870666 AT5G20080_at 8.54839243416945 8.53379530653595 9.10997375222855 8.94947567369328 8.66627066152034 8.23195104673709 8.71968147318341 8.6903537798054 8.4387921587666 8.24142232786131 8.82150174628964 9.0985853388774 8.86113426559572 9.00290925958226 9.22122588159941 8.91110656904928 8.75408745484267 9.10238978907607 8.05990980251853 0.0975684977190013 0.101166715875015 0.101870188440610 0.102713093892207 0.101972915124159 0.113197568074283 0.100951652565923 0.105717555458039 0.108180546495778 0.100363952394939 0.0975006408448766 0.100256968587706 0.0975006408448766 0.0998810836136144 0.0983077409946638 0.0975006408448766 0.108502016719489 0.104257261003052 0.106469254540670 5 0|5 /|+ 6784579 6786311 6785412.667 6782568 6786666 + gene protein_coding_gene TRUE TRUE AT5G20080.1 NADH-cytochrome b5 reductase, putative Identical to NADH-cytochrome b5 reductase-like protein (EC 1.6.2.2) (B5R) [Arabidopsis Thaliana] (GB:P83291;GB:Q8LBD3); similar to ATCBR (NADH:CYTOCHROME B5 REDUCTASE 1) [Arabidopsis thaliana] (TAIR:AT5G17770.1); similar to Flavoprotein pyridine nucleotide cytochrome reductase [Medicago truncatula] (GB:ABE86503.1); contains InterPro domain Oxidoreductase FAD-binding region; (InterPro:IPR008333); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) -0.401771922152907 -4.29895312301338 0.00137447723255714 1 5.2250612094766 17.2903995832323 -0.401771922152907 0.0803291249561633 AT5G15850_at 8.239329418368 8.11848863478719 9.6016157194996 9.4023965851773 9.47588064682763 9.60996410402464 9.12097410915998 9.09760942013224 9.06727436204161 9.09327109222315 8.75966122880256 8.48070384659063 8.97268456417968 8.86211462191774 8.47926135070601 9.51093999205442 9.73342977594383 9.04907307116091 8.98573759400836 0.088571824464565 0.0876996801493593 0.0837053727101225 0.0873185916680854 0.0866143577381017 0.0874979131274977 0.086480207071968 0.0852038222764834 0.094666042091083 0.0861400734182416 0.0872956358225143 0.0822961776848832 0.0869886747474022 0.0856700212945342 0.0849046281650352 0.0853797846344472 0.091146436466456 0.0864027347766118 0.087805061649953 5 5|0 -|/ 5176347 5176975 5176666 5176094 5177900 - gene protein_coding_gene TRUE TRUE AT5G15850.1 COL1 (CONSTANS-LIKE 1); transcription factor/ zinc ion binding Homologous to the flowering-time gene CONSTANS. Identical to Zinc finger protein CONSTANS-LIKE 1 (COL1) [Arabidopsis Thaliana] (GB:O50055); similar to CO (CONSTANS), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15840.1); similar to COL1 protein [Brassica nigra] (GB:AAN09808.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) -0.362698627085697 -4.29857811310564 0.00137531866966610 1 5.22452923695968 18.0981546160023 -0.362698627085697 0.0466975242307436 AT5G66210_at 6.29372460945599 6.5339571633225 7.55216829431732 7.39544252099418 6.98936313906099 7.25898429726192 4.43958653730779 4.55187757649428 5.56762702706276 4.78245485910546 6.50723025646672 5.96083648251702 5.57586220988014 6.4981729292625 5.88222218805102 5.8723349581801 5.91768766360074 5.96533325872467 4.76153067273034 0.222243446359884 0.228147474568846 0.232259544684845 0.229526726183222 0.235628398634172 0.229324602298543 0.229166430046602 0.251064006524911 0.239796187419131 0.230961606671256 0.227493921657092 0.222243446359884 0.22650243778586 0.223630399436676 0.228083257849831 0.226697027556765 0.228346436343715 0.231104139930660 0.226420758125620 5 5|0 -|/ 26473916 26474858 26474396.778 26473517 26476850 - gene protein_coding_gene TRUE TRUE AT5G66210.1|AT5G66210.2|AT5G66210.3 CPK28 (calcium-dependent protein kinase 28); calcium- and calmodulin-dependent protein kinase|CPK28 (calcium-dependent protein kinase 28) member of Calcium Dependent Protein Kinase similar to CPK18 (calcium-dependent protein kinase 18), calcium- and calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT4G36070.1); similar to CPK16 (calcium-dependent protein kinase 16), calcium- and calmodulin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G17890.1); similar to calcium-dependent protein kinase [Nicotiana tabacum] (GB:AAX81331.1); similar to calcium-dependent protein kinase CPK4 [Nicotiana tabacum] (GB:AAL30819.1); similar to calcium-dependent protein kinase CDPK1444 [Medicago truncatula] (GB:AAX14494.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.388926608825736 4.29700429604777 0.0013788558587533 1 5.22229644132061 11.9067201070943 0.388926608825736 0.0708424783099686 AT5G10030_at 5.24597571921782 4.91392748063964 5.60886417971368 4.91253288853236 6.635044503825 5.32979960974869 5.96927120153282 5.69478717096888 5.26499693287164 6.08087172853585 6.38156501977829 6.82864164437217 5.91476727485215 6.79821709112467 5.5360207553675 6.5783142035663 6.28034419872991 5.82230294290464 6.55304959131484 0.245460838514542 0.242249625354413 0.247628623818003 0.254087450822193 0.237970244414172 0.254980111593350 0.243146235988386 0.240596895295259 0.252893265603946 0.237970244414172 0.24483585202284 0.242330757427203 0.242139736289045 0.247542265323947 0.242450459641473 0.237970244414172 0.248328836894103 0.248253223191586 0.238085137805850 5 5 - 3137654 3138322 3137962.909 3137336 3140253 - gene protein_coding_gene TRUE TRUE AT5G10030.1 TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang, et al. (1997). Identical to Transcription factor TGA4 (Ocs element-binding factor 4) (OBF4) (AtbZIP57) (TGA4) [Arabidopsis Thaliana] (GB:Q39162;GB:Q9LX25); similar to DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65210.5); similar to 80A08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67587.1); similar to 4D11_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67521.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.781589412120189 -4.29121457259019 0.00139195079118989 1 5.21407903493722 11.6556892070612 -0.781589412120189 0.266646802750889 AT5G48570_at 4.36328192229756 4.39331881265761 5.65298783817393 6.46128855342053 5.53233691698652 4.74022844881301 4.13902230431342 3.95606676482259 4.1437211800675 3.82509646170749 5.6306802193001 5.36293154883989 5.29512705142546 5.6943019492806 5.78492578335484 5.4031137603398 5.22138443567423 6.1576939685108 3.73611508748279 0.230973391890854 0.227000454138826 0.23709538118463 0.238039000314691 0.227784534451970 0.245933358917917 0.230023782252432 0.228252760092079 0.243515975090928 0.227608185406608 0.225608780147179 0.23694126084532 0.225608780147179 0.231981934445066 0.230312079222704 0.225608780147179 0.254180434887854 0.236787236082498 0.237716392420108 5 5 - 19707974 19708950 19708472.364 19707768 19711071 - gene protein_coding_gene TRUE TRUE AT5G48570.1 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative similar to ROF1 (ROTAMASE FKBP 1), FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25230.1); similar to peptidylprolyl isomerase [Triticum aestivum] (GB:CAA68913.1); similar to 70 kDa peptidyl-prolyl isomerase (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (GB:Q43207); similar to Os08g0525600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062292.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.624027189572734 4.28738823172112 0.00140067662224671 1 5.20864530316645 9.64002348652397 0.624027189572734 0.198459886414961 AT5G54060_at 2.84318170291403 2.73179368614450 2.74569248786612 2.82213102472109 2.8930861063409 2.33962131148722 2.71526419552642 2.47188702790034 3.22448602228228 3.09665978681982 2.73090761123116 2.63339901102595 3.1600985110086 3.08136268400001 2.61318652540435 3.1504666463379 3.57649202750362 3.351861732828 3.08879860636911 0.204744753240919 0.199468446407845 0.210897277633338 0.201564843730488 0.208534924908164 0.198765291175877 0.215966644795907 0.204184045734666 0.205127331323784 0.20273778898975 0.201741048136366 0.200638651993038 0.201565808323264 0.202455992082020 0.202127043383926 0.198765291175877 0.208711604747348 0.202339512490638 0.198765291175877 5 5 - 21954183 21954694 21954502.182 21954105 21955595 - gene protein_coding_gene TRUE TRUE AT5G54060.1 UF3GT (UDP-GLUCOSE:FLAVONOID 3-O-GLUCOSYLTRANSFERASE); transferase, transferring glycosyl groups similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G54010.1); similar to glucosyltransferase [Ipomoea purpurea] (GB:BAD95882.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.442187711834657 -4.28677017851814 0.00140209144691531 1 5.20776739302766 5.7822671839415 -0.442187711834657 0.107210941899647 AT5G52880_at 6.59709729506186 6.68337663034978 7.78089730830665 8.09948213594886 8.84551979323608 8.26420619899887 7.10868791800361 6.48680455249538 5.82618631623968 5.94818525348611 7.19432770817194 7.27455256425942 7.69523020099742 7.66044575002632 7.26372199547984 7.50027100343502 7.31713279727824 7.22778598638565 5.57767670804237 0.256820943311043 0.259181385225571 0.273026923884672 0.263972735964890 0.264832692486723 0.267561404442682 0.267362261300445 0.261219413566758 0.273301950345260 0.266781126024756 0.263385839079339 0.261726572064232 0.257193259806873 0.271027838271756 0.262462820479162 0.265864281500612 0.272058942631058 0.263269508466094 0.267194461684570 5 5|0 -|/ 21449234 21450155 21449654.625 21449062 21450938 - gene protein_coding_gene TRUE TRUE AT5G52880.1 F-box family protein similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE83073.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.537527197798048 4.28547390826739 0.00140506369500507 1 5.20592591323167 14.0711087757219 0.537527197798048 0.158002303840728 AT5G56760_at 9.18969744772823 9.2334081098388 9.8435289455288 9.6743417715535 9.97240487538332 9.9406260065392 9.1902680355118 9.21506560378953 7.74579367983205 8.7152985827381 9.9338533931114 9.97668999645058 9.86295897826167 9.96671560295019 9.69414127983704 9.97579719485293 9.89115977051451 9.71205224283904 8.6184664398499 0.126802166779446 0.130267189446051 0.130529718073669 0.129116455919077 0.125623432321879 0.131644717394722 0.130793483596806 0.125915751541769 0.17077780950543 0.135134851290926 0.132310519500661 0.126486759924177 0.124756011468852 0.129989200499784 0.130152458635342 0.127761441199554 0.126615227212368 0.127862191226438 0.144354889864439 5 5|0 -|/ 22978831 22979384 22979027.333 22978535 22979886 - gene protein_coding_gene TRUE TRUE AT5G56760.1 AtSerat1;1 (SERINE ACETYLTRANSFERASE 52); serine O-acetyltransferase Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Identical to Serine acetyltransferase 5 (EC 2.3.1.30) (AtSAT-5) (SAT-c) (AtSERAT1;1) (SAT5) [Arabidopsis Thaliana] (GB:Q42538;GB:Q8LFG6); similar to AtSerat2,2 (SERINE ACETYLTRANSFERASE 1), serine O-acetyltransferase [Arabidopsis thaliana] (TAIR:AT3G13110.1); similar to cytosolic serine acetyltransferase [Thlaspi goesingense] (GB:AAT38563.1); contains InterPro domain Serine acetyltransferase, N-terminal; (InterPro:IPR010493); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Serine O-acetyltransferase; (InterPro:IPR005881); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) 0.348644966947301 4.27243692035619 0.00143532679614504 1 5.1873905366626 18.6506795785636 0.348644966947301 0.0310341287163383 AT5G12210_at 8.98980192788832 9.13681993363583 9.98352645492672 9.9061480809532 10.3588912521490 9.94318125813257 8.27289061431108 8.13300893473607 8.34596677724693 8.08292165983811 9.19857800621852 8.98270068885529 9.2743844105767 9.23836316095793 8.88078680990639 9.10680364402028 9.14882997622483 9.1747534105678 8.14372398105721 0.105461475222183 0.106196374244339 0.112507450941530 0.107255320203105 0.108595506960956 0.110790012093305 0.109592633546706 0.113366239117854 0.108236210032605 0.107133859500731 0.108121419646162 0.107468055348194 0.107180222048596 0.116520803651480 0.106964236729976 0.107373311628448 0.108942603122088 0.104966576824463 0.111732099125242 5 5|0 +|/ 3948529 3949567 3949133.4 3947104 3949867 + gene protein_coding_gene TRUE TRUE AT5G12210.1|AT5G12210.2 geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative similar to geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative [Arabidopsis thaliana] (TAIR:AT3G12070.2); similar to putative Rab geranylgeranyl transferase type II beta subunit [Glycine max] (GB:AAQ62584.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) 0.400323687748273 4.27097204483439 0.00143876974226162 1 5.18530613726918 17.9987939668233 0.400323687748273 0.0811667680588592 AT5G03340_at 6.42413945976883 6.8757246774084 7.39464862771254 7.94057291782264 7.4932801862083 7.60844902516249 5.20445319626576 5.55204419934253 5.30451014150210 5.44563659087134 6.68436323220289 7.16327085231894 7.33284608333376 6.97820803011773 6.57816206954013 7.27874287065514 7.67282676095463 6.94437387372028 6.0224721073216 0.231939696764335 0.232560648964830 0.244027538669899 0.239320258888150 0.236548501707228 0.238664718103420 0.233794991488532 0.243515663236448 0.251511063771944 0.232517429783090 0.235521248128448 0.231896130387541 0.234200148774144 0.231896130387541 0.234655497961709 0.232339055143827 0.248855181162857 0.234680104340785 0.233895379962623 5 5 - 810099 810705 810432.273 809947 813227 - gene protein_coding_gene TRUE TRUE AT5G03340.1 (Cell division control protein 48 homolog E); ATPase Identical to Cell division control protein 48 homolog E (AtCDC48e) (Transitional endoplasmic reticulum ATPase E) (CDC48E) [Arabidopsis Thaliana] (GB:Q9LZF6); similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to CDC48 (CELL DIVISION CYCLE 48), ATPase [Arabidopsis thaliana] (TAIR:AT3G09840.1); similar to putative spindle disassembly related protein CDC48 [Nicotiana tabacum] (GB:ABF59516.1); similar to Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) (GB:P54774); similar to Cell division cycle protein 48, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53974.2); contains InterPro domain Aspartate decarboxylase-like fold; (InterPro:IPR009010); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase, CDC48; (InterPro:IPR005938); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase VAT, N-terminal; (InterPro:IPR003338); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.495799947896372 4.26779499133362 0.00144626668708816 1 5.1807842632169 13.1466501202967 0.495799947896372 0.138015396950176 AT5G50320_at 6.6663084506638 7.11419284091495 7.14915207795765 7.5012626761523 7.98664008798648 7.69224458198988 6.61404564422904 6.97358977286787 5.8407331788288 5.6169943005769 6.14433979242454 6.03284316697244 6.05908566874741 5.86662354156769 6.1557836661938 6.1899759102333 6.37156757857727 6.22678862524256 5.72922609786425 0.195736474671010 0.197559783598042 0.200203350019251 0.200817321247119 0.198746934355787 0.217023012257039 0.195402166692383 0.198302152725311 0.206356370486639 0.204180774871248 0.198416171203457 0.202693245351599 0.195717608433365 0.207104737825184 0.195941710046335 0.200633454252884 0.201792589825082 0.206434978494136 0.202744406825698 5 5|0 -|/ 20498562 20499690 20499381.5 20497852 20502076 - gene protein_coding_gene TRUE TRUE AT5G50320.1 ELO3 (ELONGATA 3); N-acetyltransferase/ catalytic/ hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism / iron ion binding A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Identical to Probable histone acetyltransferase ELO3 (EC 2.3.1.48) (Protein ELONGATA 3) (Elongator component 3) (Elongation protein 3) (HAG3) [Arabidopsis Thaliana] (GB:Q93ZR1;GB:Q9FK40); similar to histone acetyltransferase HAT2 [Triticum aestivum] (GB:ABG43095.1); similar to elongation protein 3 homolog [Gallus gallus] (GB:NP_001034382.1); similar to RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase (ISS) [Ostreococcus tauri] (GB:CAL57459.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; (InterPro:IPR000793); contains InterPro domain Histone acetyltransferase ELP3; (InterPro:IPR005910); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182); contains InterPro domain Elongator protein 3/MiaB/NifB; (InterPro:IPR006638) -0.474817941485789 -4.26149027451266 0.00146126564981191 1 5.1718060180461 13.142109776346 -0.474817941485789 0.127230254279896 AT5G58787_at 7.76400665440297 7.95574637996757 8.96887121314083 8.54740323639079 9.11306279958507 8.67952277007061 5.95317238846472 6.04551433375724 5.51234742482609 6.40879484730984 7.05520657408237 6.95632272891628 7.29050953910913 6.89872299781794 6.79444642058712 7.62757850766202 6.76558822663657 7.17643829299694 6.21731461026448 0.264839399611499 0.264839399611499 0.266652776784001 0.264839399611499 0.26962136232179 0.279059855134260 0.268362393117904 0.267690226072332 0.281987069780656 0.266463444835554 0.266683636236596 0.267957465442223 0.268292806385513 0.280720665597758 0.272368678522466 0.264839399611499 0.273102785244074 0.274365574260613 0.264839399611499 5 5|0 +|/ 23760730 23761522 23761226.5 23759676 23761845 + gene protein_coding_gene TRUE TRUE AT5G58787.1|AT5G58787.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G47160.1); similar to Os04g0679800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054282.1); similar to H0801D08.18 [Oryza sativa (indica cultivar-group)] (GB:CAJ86260.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.445530591074629 4.25827021690614 0.00146898905731598 1 5.16721803192192 14.4367894495272 0.445530591074629 0.110928359401924 AT5G07990_at 2.12363154919139 1.95082612835883 2.58177546880958 2.64205129291356 2.81547897750267 3.19808940955497 2.28263996049801 2.08129520180331 1.89633810172001 2.56124523929517 3.34876138402305 2.94409863017499 2.86727099600015 2.80895839183464 2.93390612682766 2.9711603154893 3.24694339404463 2.84880287725106 2.47758611949459 0.207329189836569 0.207820558505666 0.209449394075835 0.206010707592596 0.206950262877028 0.205853483592422 0.209164318922753 0.205289004024133 0.210404872516351 0.209082501480245 0.20789161961562 0.205615041393789 0.204466727432267 0.216739659519948 0.203207694795486 0.206721447501283 0.208135231609294 0.213537148140172 0.211700545316376 5 5|0 +|/ 2562241 2562819 2562528.1 2560395 2563110 + gene protein_coding_gene TRUE TRUE AT5G07990.1 TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding Required for flavonoid 3' hydroxylase activity. Identical to Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (AtF3'H) (Cytochrome P450 75B1) (TRANSPARENT TESTA 7 protein) (CYP75B1) [Arabidopsis Thaliana] (GB:Q9SD85); similar to CYP706A5 (cytochrome P450, family 706, subfamily A, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G12310.1); similar to flavonoid 3'-hydroxylase [Hieracium pilosella] (GB:ABC47161.1); similar to flavonoid 3'-hydroxylase [Matthiola incana] (GB:AAG49301.1); similar to flavonoid 3'-hydroxylase [Osteospermum hybrid cultivar] (GB:ABB29899.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.398718538000838 4.25263621021454 0.00148260557346436 1 5.15918662597846 5.11345395755851 0.398718538000838 0.0812482603116716 AT5G19570_at 4.88678010405462 4.94146090554346 4.69161899452498 4.46594843792990 5.38370228535406 5.32385818199191 4.38791646057736 4.77009295216195 4.30719897805537 4.45697465887414 5.38312043016792 6.05338516336116 5.15355359343599 5.28149859717273 5.4159973892594 5.19745463557854 5.180085415929 4.82123517112456 4.72880116765438 0.250452962361294 0.247945962260563 0.261082516137920 0.257508302909354 0.245920823697083 0.253718951702934 0.25194087724987 0.249871311503946 0.256307758677802 0.249163410947795 0.250209935592425 0.250360869544969 0.251585447335682 0.250060517076064 0.253607040367109 0.245920823697083 0.245920823697083 0.252714371375866 0.246142971008393 5 5 + 6606759 6607130 6606909.273 6606702 6607205 + gene protein_coding_gene TRUE TRUE AT5G19570.1 similar to Os05g0188300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054840.1); similar to hypothetical protein DDB_0232155 [Dictyostelium discoideum AX4] (GB:XP_642584.1) -0.394201901841337 -4.25089087631604 0.00148685058060268 1 5.15669758356072 9.76064707411642 -0.394201901841337 0.078077649689435 AT5G26820_at 9.09907039711925 9.03144297034958 9.6362146975407 9.3104938759898 9.89076785503877 9.49523750425254 9.61541806398108 9.40579568474705 9.44874577682958 9.583273846723 10.0051508202786 10.0685077358288 9.77936163805443 9.87447929717148 10.0251741239579 10.2696842523895 9.40152991854958 9.7426578257121 9.83208798426592 0.114839505877659 0.108571606957234 0.113313339344655 0.114984866763541 0.112334725749087 0.115565499505222 0.113378208678433 0.110591184390438 0.138246084759071 0.115191764952996 0.108571606957234 0.108906995269736 0.110707426052955 0.116199024627513 0.111286849318557 0.110725572723458 0.117206592418324 0.11196234937438 0.116805035212988 5 5 + 9436122 9436922 9436694.818 9433622 9437108 + gene protein_coding_gene TRUE TRUE AT5G26820.1 ferroportin-related similar to iron-responsive transporter-related [Arabidopsis thaliana] (TAIR:AT5G03570.1); similar to flagellar biosynthesis protein FLHA, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98947.1); similar to Os12g0562100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067026.1) -0.421040971582919 -4.24955723915219 0.00149010284845412 1 5.15479533925123 19.1941488331768 -0.421040971582919 0.0965163146181586 AT5G54460_at 3.15082682541921 3.03454852613188 3.05720032251771 3.38702068713916 2.98159111965189 3.38757199727643 3.10774365404288 2.96503180779742 3.40012733728880 3.48473666147677 3.17982823522719 3.27873541677824 3.42619275303928 3.23605541865444 3.32162855873354 3.12801429332499 3.11831513572284 3.46483422137878 2.88580077587073 0.191717150827638 0.191040450798508 0.192678720066087 0.191040450798508 0.194676523297989 0.196774568784865 0.191040450798508 0.19372282918713 0.194650289833785 0.199368199183097 0.192499163854132 0.191221663427317 0.195432162402444 0.195640957920168 0.191040450798508 0.194441797684489 0.193841053067310 0.199370745266901 0.195740161288095 5 5|0 -|/ 22127720 22128146 22127948.3 22127651 22128175 - gene protein_coding_gene TRUE TRUE AT5G54460.1 wound-responsive protein-related similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001053493.1) -0.420024601752791 -4.24803871417015 0.00149381507819774 1 5.15262903316562 6.39698624865683 -0.420024601752791 0.0959617774438082 AT5G47670_at 2.87346946259323 3.10964212497846 2.80791038097695 3.20522280990525 2.83683542271719 3.25663317987657 3.24894818804962 3.14425196460321 3.77460166952337 3.19522302647626 3.71182845384366 3.06961050689721 3.54575315383347 3.49317950690708 3.57737551526337 3.51859604708179 3.55599532430353 3.92140061722208 3.05067613477325 0.205887704697110 0.203114464974955 0.207670910108274 0.201997678845573 0.202143248835513 0.212015263818814 0.204932197735582 0.211885781563858 0.207786282833207 0.205079966141544 0.208868322858044 0.211396703459359 0.202646874254396 0.205984436464181 0.210202020759867 0.204585124601278 0.217500306237707 0.203930659565980 0.208195612023936 5 5 + 19332679 19333044 19332860.182 19332249 19333395 + gene protein_coding_gene TRUE TRUE AT5G47670.1|AT5G47670.2 CCAAT-box binding transcription factor family protein / leafy cotyledon 1-related (L1L) Identical to Nuclear transcription factor Y subunit B-6 (AtNF-YB-6) (Protein LEAFY COTYLEDON 1-LIKE) (NFYB6) [Arabidopsis Thaliana] (GB:Q84W66;GB:Q8GV55;GB:Q9FGJ0); similar to LEC1 (LEAFY COTYLEDON 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G21970.1); similar to leafy cotyledon 1-like L1L protein, putative [Brassica oleracea] (GB:ABD64986.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-like transcription factor/archaeal histone/DNA topoisomerase; (InterPro:IPR003957); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.442034654227942 -4.24700221480166 0.00149635450291494 1 5.1511501667584 6.50505635884255 -0.442034654227942 0.109562348007224 AT5G49550_at 7.12708345959076 7.3048871843949 8.05894351029018 8.192320927903 8.81542314918078 8.26343657981458 7.07017134555153 7.04489840685382 5.96223505171827 6.62982403158389 8.44087129665435 8.13823279592824 7.87778625817956 8.01470417107961 8.2129975389205 7.5526052780329 7.92891134658347 7.58491721073946 6.37852312604069 0.179404013457936 0.178025594823282 0.176615015933384 0.178956439835276 0.18157266962931 0.190667940882597 0.185175684437958 0.183747692755011 0.187096524801658 0.194631312649504 0.181437289766466 0.183121682943676 0.179913396994196 0.183482524512492 0.180788298069135 0.176615015933384 0.184803676248603 0.187005585936292 0.190542926443904 5 5|0 -|/ 20123937 20124356 20124115.6 20123879 20124417 - gene protein_coding_gene TRUE TRUE AT5G49550.1 similar to hypothetical protein DDBDRAFT_0205421 [Dictyostelium discoideum AX4] (GB:XP_642335.1); similar to Os02g0190900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046154.1); contains domain gb def: Hypothetical protein (PTHR10668:SF1); contains domain PHYTOENE DEHYDROGENASE (PTHR10668) 0.430940186045773 4.24389134043176 0.00150400336962586 1 5.14671057561709 14.8808483905120 0.430940186045773 0.103070229573639 AT5G01310_at 2.60878003701257 2.74184594394337 3.33130155829100 3.62055217715298 3.05253240850341 3.58647831844479 2.31929248061498 2.76506270591885 2.71770517234022 2.27492615904082 3.75620801241661 3.38361106842196 3.56649996449416 3.86183891219842 3.30067972624571 3.73854291136210 3.55589644434923 3.31231457664557 2.52299960836980 0.203699372070830 0.196260835532317 0.203198571532574 0.195514717379481 0.195580515126828 0.199533520616881 0.201436980966503 0.200369377057527 0.195654530196064 0.205134075422908 0.19277120844311 0.194150928343250 0.195274470955592 0.191623021950151 0.191923894179918 0.194022506434107 0.191055599709987 0.203690227659195 0.197645115001132 5 5|0 +|/ 128131 128927 128623.889 125303 128959 + gene protein_coding_gene TRUE TRUE AT5G01310.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT5G09750.1); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G21330.1); similar to basic helix-loop-helix, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95410.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Histidine triad (HIT) protein; (InterPro:IPR001310); contains InterPro domain Appr-1-p processing; (InterPro:IPR002589); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.48215660279332 4.2418382813209 0.00150907378198235 1 5.14377976939667 6.03556033636874 0.48215660279332 0.132381929734953 AT5G27100_at 1.58661835796537 2.17081628312608 1.69912705966727 1.99613014317573 1.746251225475 1.87208810068016 2.21719449291236 1.86519468312021 2.23464470739077 2.89630596832267 2.13028021071242 1.65280073155852 2.13387453777098 2.03849551116723 2.13936730593115 2.00145643226573 2.01343346867057 2.29475380398711 2.39327406793714 0.202193288705225 0.199647130187944 0.202075120421584 0.203610062683274 0.197695238120594 0.196923015342133 0.200022067839877 0.204245128549452 0.202488887631996 0.199137664372187 0.198248983474716 0.200517498482155 0.205704997836043 0.204230684962443 0.199343446703501 0.196771678207353 0.201756792699900 0.206003993636817 0.208934603255396 5 5|0 -|/ 9535207 9535817 9535489.8 9535062 9538336 - gene protein_coding_gene TRUE TRUE AT5G27100.1 ATGLR2.1 (Arabidopsis thaliana glutamate receptor 2.1) member of Putative ligand-gated ion channel subunit family Identical to Glutamate receptor 2.1 precursor (Ligand-gated ion channel 2.1) (AtGLR3) (GLR2.1) [Arabidopsis Thaliana] (GB:O04660); similar to ATGLR2.2 (Arabidopsis thaliana glutamate receptor 2.2) [Arabidopsis thaliana] (TAIR:AT2G24720.1); similar to ATGLR2.3 (Arabidopsis thaliana glutamate receptor 2.3) [Arabidopsis thaliana] (TAIR:AT2G24710.1); similar to ATGLR2.4 (Arabidopsis thaliana glutamate receptor 2.4) [Arabidopsis thaliana] (TAIR:AT4G31710.1); similar to Glutamate receptor 2.7 precursor (Ligand-gated ion channel 2.7) (GB:Q8LGN0); similar to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GB:Q9LFN5); similar to Glutamate receptor 2.4 precursor (Ligand-gated ion channel 2.4) (GB:O81776); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) -0.478527486117012 -4.2396330578715 0.00151453996484079 1 5.14063099643597 4.17349387566935 -0.478527486117012 0.130565911428758 AT5G22690_at 2.83610620953634 2.85086857555673 3.3630417232596 3.50173158395441 3.89757511587876 3.8451592710982 2.40722189485132 2.09721240440979 3.34618335634123 2.60235296247843 3.56691269314364 3.4862458124983 2.48686984607538 3.26737493924548 3.10177471920171 3.13437859131668 3.14590299454063 3.66323063963703 2.16720270763070 0.216704306565829 0.212837095553317 0.221085122934172 0.215334358393530 0.218427749300239 0.217697289204438 0.213811890004965 0.211380596111367 0.225184878606991 0.215017794705185 0.217913543802057 0.218101487209843 0.216056743497159 0.217668607970538 0.223322082352077 0.215100811635625 0.219125551589907 0.216717729684324 0.211380596111367 5 5 + 7544193 7544833 7544432.727 7541274 7545185 + gene protein_coding_gene TRUE TRUE AT5G22690.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46470.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.370422520337623 4.23945141459205 0.00151499113645745 1 5.14037159891014 6.06828090812188 0.370422520337623 0.0595232855207372 AT5G59700_at 4.14329866353693 5.00877003328396 6.77394162666959 6.70257144010209 6.81602803139597 6.4211382241732 5.63370207533759 5.7144578306093 3.99760466163996 4.25139215258346 5.16864198709778 5.03038720185394 6.0060655077018 5.98325549315291 4.64426144532931 6.32593995681967 6.73543617268697 5.24663926993538 4.21439058823241 0.192031365381434 0.187409791382056 0.182803538838508 0.176670187115659 0.178426991674465 0.186164847905122 0.180106268712714 0.179959205601001 0.203243320173143 0.197877665153558 0.182724072979107 0.182743870193380 0.183068576881004 0.176471158033315 0.185441690771113 0.17818063308842 0.184663591971242 0.192738655395186 0.18042539223138 5 5 - 24069851 24070414 24070143.636 24069611 24072651 - gene protein_coding_gene TRUE TRUE AT5G59700.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G39110.1); similar to receptor-like protein kinase [Catharanthus roseus] (GB:CAA97692.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT07653.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.546944371453011 4.23590204224929 0.00152383552509834 1 5.13530182891569 10.8002589140423 0.546944371453011 0.165680645080636 AT5G21090_at 11.7572054455271 12.0550250913951 12.8030208571589 12.7206297414232 12.6136958726563 12.4485657520004 11.4729786589679 11.5877628209113 11.3053662084750 11.1842722030087 12.0820200000596 12.1176192152457 12.1725870127753 11.9964140681733 12.0829415148325 11.9909030069712 11.6595129938074 12.1754386371689 11.094583955099 0.0985889750773873 0.0911523186635278 0.095586941881333 0.0929949102160247 0.0911523186635278 0.0944997055611577 0.0911523186635278 0.092845599718903 0.0980974181699957 0.0946072801659354 0.0914348052321903 0.0911523186635278 0.0929823803321223 0.0983630993085472 0.0911523186635278 0.0911523186635278 0.0961458682657137 0.0948393846986092 0.0953735163705469 5 5|0 +|/ 7164822 7166880 7165553.7 7164614 7167257 + gene protein_coding_gene TRUE TRUE AT5G21090.1 leucine-rich repeat protein, putative similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G43740.1); similar to Leucine-rich repeat, plant specific [Medicago truncatula] (GB:ABE82625.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.374910809658044 4.23582915799299 0.00152401770562499 1 5.13519770321394 23.7970707025001 0.374910809658044 0.063802557521582 AT5G04420_at 5.73361440924006 5.69797972746083 6.06183868742281 5.95560318246329 6.58589094925065 6.34470918729971 5.8829074391032 5.54534081775475 6.07340840980303 6.30825274183786 7.15825246012486 7.58836638207216 6.74331437797973 7.13894661968574 7.27727457542279 6.74542665611069 6.29321785763648 7.31190353616906 6.33951213358219 0.163779225900016 0.16032623120138 0.161894927520084 0.164743025505783 0.172511491701027 0.169873007937117 0.170524734490175 0.167256687557232 0.181323634767452 0.164001064915683 0.164305739346971 0.170616021770808 0.165813156007512 0.170740396445845 0.162079898230254 0.167305593387525 0.178292496235705 0.165489378076271 0.162358739027579 5 5|0 -|/ 1246887 1247678 1247301.111 1246605 1249944 - gene protein_coding_gene TRUE TRUE AT5G04420.1|AT5G04420.2|AT5G04420.3 kelch repeat-containing protein similar to ACBP4 (ACYL-COA BINDING PROTEIN 4, ACYL-COA-BINDING DOMAIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.2); similar to Os02g0822800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048563.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR88580.1); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.387680784320133 -4.23352009059318 0.00152980125849900 1 5.13189842962191 12.6122250016117 -0.387680784320133 0.0743683524842229 AT5G65570_at 1.47863178270162 1.28683814786432 1.93381249882756 1.91822605368713 2.18368874700869 1.88530370227188 1.42298123089696 1.57163046003888 1.37884320186957 1.35598681709929 2.01974185878264 1.66182873642548 1.81893816847022 1.62827627367135 1.99077161343846 2.09052851236430 1.63385981913423 1.47037467530720 1.27323551410903 0.209919546730913 0.20991973199147 0.209683388674105 0.206460920870500 0.207782017709566 0.211517707791721 0.209647460529924 0.207008042082992 0.208722366216624 0.208479506870731 0.211485203048239 0.214426077004351 0.209215058758611 0.210180500046311 0.209151711986420 0.216909472093815 0.216317224204901 0.225658808385547 0.207853197424246 5 5 + 26222811 26223380 26223056.909 26221194 26223410 + gene protein_coding_gene TRUE TRUE AT5G65570.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G11290.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.377697531522713 4.2300957049135 0.00153842076979918 1 5.12700399311931 3.27279497869139 0.377697531522713 0.06661097774301 AT5G42250_at 9.05148950514134 9.2287748997786 10.3050887305484 10.2502795676244 10.6370548115194 10.0725810039809 9.94194514058917 9.68653072374264 9.07989140079512 9.28427463704241 10.8073721025068 10.2954455505753 11.0970047459446 10.8944703279314 10.0442367674643 10.6782396379442 10.7724132480978 10.3161679718086 9.27848501244785 0.118430544710435 0.118570015506364 0.117522558303122 0.116064539883935 0.116878234546860 0.115986890133953 0.118675722008190 0.118743305307702 0.13568854640601 0.122614517122052 0.117931499057191 0.117055875631052 0.115008639081099 0.118163461473366 0.11943764696639 0.115008639081099 0.119646720307713 0.130074955996223 0.124493524654416 5 5 + 16913531 16914620 16914200.636 16911237 16914844 + gene protein_coding_gene TRUE TRUE AT5G42250.1 alcohol dehydrogenase, putative similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT4G22110.2); similar to alcohol dehydrogenase ADH [Lycopersicon esculentum] (GB:AAB33480.2); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.444157662902598 4.22895702420926 0.00154129820785384 1 5.12537607727584 19.8104109532636 0.444157662902598 0.111925217210144 AT5G14460_at 7.97434172753395 7.89409740997689 8.25412272882128 8.33791309793717 8.67083809611464 8.3631743029623 8.02377502928727 8.15642955236933 7.88278844235514 7.85712682193305 8.3389481858467 8.70909197011865 8.39415381915683 8.4312703563628 8.43308772992942 8.95818761815652 8.52567851193315 8.47090837058134 7.97285588082342 0.141191433601379 0.144732047591895 0.151167531885463 0.143046434888207 0.141191433601379 0.151229837842409 0.151704947495712 0.146655716753979 0.174612962920283 0.147182495815183 0.157309998739746 0.143121250939267 0.141191433601379 0.141191433601379 0.150836590616967 0.148899984805874 0.162737819838481 0.163216565721025 0.143160696772775 5 5|0 -|/ 4660527 4661301 4661055.333 4660062 4662671 - gene protein_coding_gene TRUE TRUE AT5G14460.1 pseudouridylate synthase TruB family protein similar to NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) [Arabidopsis thaliana] (TAIR:AT3G57150.1); similar to putative tRNA synthase [Oryza sativa (japonica cultivar-group)] (GB:AAU44133.1); similar to Os05g0108000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054428.1); similar to putative tRNA synthase [Oryza sativa] (GB:AAK73131.1); contains InterPro domain tRNA pseudouridine synthase B; (InterPro:IPR004510); contains InterPro domain Pseudouridylate synthase TruB, N-terminal; (InterPro:IPR002501) -0.37137192389933 -4.22716101441778 0.00154584818555601 1 5.12280799254938 16.4277979274410 -0.37137192389933 0.061358606910556 AT5G16420_at 3.25124179436971 3.30832211041478 3.42688761935257 3.49061267267588 2.84524220580152 2.92633710049796 2.67426029590560 2.95418898633712 2.83063420711151 2.93715322692472 2.49822631486402 2.70486779701807 3.18551277741652 2.92468523215883 2.9346618229225 3.08649998426048 3.02511540805453 3.24655522026006 2.986672327178 0.205576106634055 0.200053187662910 0.208043919027492 0.212357256083986 0.203283951355089 0.205400576438925 0.206633420395402 0.204852317559589 0.206034485365713 0.20911786701313 0.208955991162425 0.200053187662910 0.202476615117039 0.219570772666886 0.205005724258586 0.206400054908491 0.208112599199708 0.204785042165768 0.204489622391164 5 5 + 5369078 5369620 5369357.636 5368037 5369644 + gene protein_coding_gene TRUE TRUE AT5G16420.1 pentatricopeptide (PPR) repeat-containing protein similar to MEE40 (maternal effect embryo arrest 40), binding [Arabidopsis thaliana] (TAIR:AT3G53700.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os06g0125300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056649.1); similar to Os03g0597200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050605.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.361898813953769 -4.22429879849554 0.00155312839398267 1 5.11871430109398 6.04409600984812 -0.361898813953769 0.0525629145245766 AT5G13770_at 9.99633314936792 10.2147226352626 10.6931756015353 10.7666664071382 11.0002369539982 10.8478091957382 10.8907466757687 10.9487529411235 11.57209936975 11.5186944706940 11.7891986430202 11.7503771391890 11.5919002819799 11.6948898616689 11.6323986310454 12.0381955575478 11.3685679766380 11.6903119158130 11.6819995077879 0.0729422334449597 0.0665221487496673 0.0652673275043811 0.0677278060948299 0.0652875684602424 0.0721422357302267 0.0676661111906637 0.06742497443439 0.0756088209685346 0.0666610283640893 0.067165373619082 0.0652673275043811 0.0652673275043811 0.0652673275043811 0.0684914264889475 0.0652673275043811 0.0767852517835937 0.0690676132571493 0.0652673275043811 5 5 + 4446779 4447231 4447091.273 4445426 4447479 + gene protein_coding_gene TRUE TRUE AT5G13770.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G42310.1); similar to Os01g0852900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044829.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE94700.1); similar to Os04g0583000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053661.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.358161845790818 -4.22178168773205 0.00155956051147288 1 5.1151131253275 22.3125110034616 -0.358161845790818 0.0488534923161419 AT5G19430_at 6.22254453163979 6.29943977561935 7.45363987812937 7.41260966851546 8.17136408670633 7.80091990341955 6.14264932354006 6.2241774966921 5.94460535517374 6.57659760880917 7.7392081103495 7.42038067565841 7.91250525467483 7.75962521821151 7.35558527575 8.3786293888956 7.87036204522711 7.6742981572719 6.78497378458058 0.185500562931147 0.178429247440327 0.179695842060240 0.18893686671904 0.18428455635768 0.196101120182431 0.183643344312423 0.187435043775361 0.201208110685414 0.190241367173306 0.193146404243808 0.178041220455399 0.18748493182296 0.188104517368189 0.178758714977446 0.183700348964487 0.197071741484322 0.182880626042549 0.184457426865936 5 5|0 +|/ 6554936 6555582 6555278.3 6553827 6555833 + gene protein_coding_gene TRUE TRUE AT5G19430.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G12310.1); similar to Os01g0954400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045432.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.377192124806982 4.21452935395353 0.00157824941402007 1 5.10473176781767 14.0655263406708 0.377192124806982 0.0673518641642183 AT5G23740_at 9.93448887356883 10.1867226162625 9.80010972812139 9.86756961882762 10.2457676961044 10.2056400077618 9.78922162257758 10.1542226852197 9.984011796036 9.91025609273773 10.5865368373308 10.9483535117327 10.3948163634006 10.6364341328282 10.8346591979302 10.1287202087563 9.97606974572423 10.2577495030927 9.97174600898265 0.111596928230832 0.112374878384923 0.113332246166269 0.113342922516971 0.117784349847960 0.119447123579091 0.112945932931696 0.114777825676684 0.119847024706771 0.114278253291337 0.118818885196336 0.113892560829042 0.113178780456827 0.116794783937554 0.118882254834839 0.113151650000664 0.114736464873189 0.117455596393849 0.114032877215980 5 0|5 /|- 8008255 8008718 8008445.5 8008043 8009439 - gene protein_coding_gene TRUE TRUE AT5G23740.1 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural constituent of ribosome Encodes a putative ribosomal protein S11 (RPS11-beta). Identical to 40S ribosomal protein S11-3 (RPS11C) [Arabidopsis Thaliana] (GB:P42733;GB:Q9FFA6); similar to EMB1080 (EMBRYO DEFECTIVE 1080), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G48930.1); similar to ribosomal protein S11 (GB:AAA32867.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Ribosomal protein S17; (InterPro:IPR000266) -0.390674071919073 -4.21437077001048 0.00157866068987873 1 5.10450466993112 20.2358455578146 -0.390674071919073 0.0779723526464552 AT5G24410_at 2.36487900598640 2.06549220696725 2.05091998915412 2.42141409616725 2.21553113703371 2.49835937590262 2.21057870999549 2.15998648204911 2.73570246744443 2.78746073400721 2.65537700537093 1.87248356540465 2.38448399854021 2.05280609248469 2.71563491081595 2.19217933426922 2.32136328235640 2.44991063663129 2.74424734396381 0.195731009092633 0.198357017634513 0.193298162181584 0.205354297480625 0.197248616506776 0.197252136115586 0.195932901158808 0.193298162181584 0.208308005486753 0.198358801797915 0.195504371903552 0.197983180935602 0.209836011562757 0.201328455710982 0.194985676388128 0.193871877802568 0.198314898170196 0.203125738819762 0.203905414684253 5 5 - 8332710 8333115 8332906.909 8332476 8334069 - gene protein_coding_gene TRUE TRUE AT5G24410.1 glucosamine/galactosamine-6-phosphate isomerase-related similar to glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G49360.1); similar to putative 6-phosphogluconolactonase [Brassica carinata] (GB:AAK50346.1); contains InterPro domain 6-phosphogluconolactonase; (InterPro:IPR005900); contains InterPro domain Glucosamine/galactosamine-6-phosphate isomerase; (InterPro:IPR006148) -0.417101279888033 -4.21369230281392 0.00158042151365174 1 5.10353303579698 4.79156180959332 -0.417101279888033 0.0962672040545651 AT5G24150_at 9.70956980725853 10.0607360391447 12.5625733195285 12.6226385897934 11.7254362554780 11.7135762458265 12.3948257178610 12.4620464704804 10.8758331348351 11.8312003283849 12.1676723759963 11.2841564884345 12.5178389051867 12.3099885244260 11.4861971956079 12.5244451714018 12.6351666986251 12.3859126021113 11.4140621208042 0.0871559432582864 0.0797237051508841 0.0814416139350223 0.079530951824445 0.0834795134242098 0.0909811185932187 0.0789935944698715 0.082165629061636 0.0892943269442734 0.0809265890868764 0.0808844262274089 0.0799864400091514 0.0810998516899538 0.0822067694321664 0.0831312416471995 0.0789935944698715 0.0976793917682527 0.0848948757202091 0.0789935944698715 5 5 - 8172623 8173368 8172931.818 8172319 8175434 - gene protein_coding_gene TRUE TRUE AT5G24150.1|AT5G24150.2 SQP1 (Squalene monooxygenase 1) squalene monooxygenase gene homolog Identical to Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene epoxidase 1,1) (SE 1,1) (SQP1,1) [Arabidopsis Thaliana] (GB:O65404); similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:AT5G24160.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042)|Identical to Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene epoxidase 1,1) (SE 1,1) (SQP1,1) [Arabidopsis Thaliana] (GB:O65404); similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:AT5G24160.1); similar to SQP2 (Squalene monooxygenase 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G24140.1); similar to Squalene monooxygenase 1,2 (Squalene epoxidase 1,2) (SE 1,2) (GB:O65726); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.371474289297897 4.21023716544922 0.00158942060866585 1 5.0985838008265 23.4252356922873 0.371474289297897 0.0627749319242745 AT5G65910_at 8.08000628450122 8.25736768538858 9.0978868522973 9.37383970441325 9.78327231179995 9.4488465701343 8.037268399863 8.09495075466465 7.83565223980561 8.24620892793035 9.50774965525874 8.93753639751127 9.20190432552478 9.37869092854993 8.96605963631856 9.19812593291025 8.99317338543235 9.19579873679099 8.0948235541366 0.154041815516975 0.155734788751347 0.160737262322471 0.154765540591268 0.154482444009717 0.158469793477158 0.165234403914693 0.162235507800576 0.165955465644847 0.171846836558642 0.154206380440849 0.154899633924085 0.158722830795962 0.158073582993600 0.154679282398803 0.153855838114386 0.179704425923014 0.153840144331735 0.160726939061848 5 0|5 /|- 26378874 26379305 26379113 26378666 26380686 - gene protein_coding_gene TRUE TRUE AT5G65910.1 BSD domain-containing protein similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49800.1); similar to Os01g0766600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044357.1); similar to putative BSD protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53348.1); contains InterPro domain BSD; (InterPro:IPR005607) 0.395178755309263 4.20851903499172 0.0015939155504619 1 5.09612200240672 17.3873172114218 0.395178755309263 0.0816801282918832 AT5G02990_at 3.62416815926508 3.16747337918295 3.48907160760823 3.26026182015844 2.99726400605673 3.40016161215043 2.75761445326317 3.38756388967126 3.49766793304623 3.32792020107836 3.2901377910535 3.29867670728364 3.35261526612835 3.6036684224049 3.49579516268657 3.08355349071607 3.36663320026601 3.31280507852928 3.33387346543982 0.214196357743706 0.203823223274424 0.205082447988774 0.203823223274424 0.214862020506382 0.204317599255756 0.206598137397746 0.205193045106596 0.209165134535803 0.203823223274424 0.212389201076267 0.208354225279950 0.207985738287834 0.208655856904294 0.216135720698741 0.208274777297245 0.207115736506042 0.218961265070978 0.205000828158996 5 5 + 702030 702476 702280.273 700167 702628 + gene protein_coding_gene TRUE TRUE AT5G02990.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.525024536714626 -4.20630463903238 0.00159972847087149 1 5.09294845136864 6.62893378578871 -0.525024536714626 0.156715958273247 AT5G57690_at 2.1654120090731 2.30110012349375 1.65333014028017 2.31359502596559 1.72660563751204 2.08063142527192 2.03349076665785 2.25759501973292 2.66342060626664 2.5341322467033 2.07756330303186 1.72933354700422 1.93128603891487 1.99822387750567 2.31010759028814 2.03287983090980 2.22900519050439 2.57462495363905 2.11418253216445 0.22960344561724 0.225819712242741 0.232460636853251 0.229967190274427 0.228658499472744 0.228315693525085 0.226140178804846 0.221937524296388 0.222397462390787 0.219874476247453 0.225140588972378 0.222156110591804 0.224795572779611 0.220833227250191 0.230876855178554 0.239054550758944 0.231670287119156 0.228158063973526 0.227427517407098 5 5 - 23389310 23390418 23389847.6 23389289 23391695 - gene protein_coding_gene TRUE TRUE AT5G57690.1 diacylglycerol kinase similar to diacylglycerol kinase, putative [Arabidopsis thaliana] (TAIR:AT2G18730.1); similar to Diacylglycerol kinase accessory re (GB:ABE81286.1); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) -0.48709682239053 -4.20369809688590 0.00160659927506649 1 5.08921190903702 4.34028160342486 -0.48709682239053 0.137348937099240 AT5G19580_at 3.58468726312823 4.50851263270108 4.34942528213356 4.13749508862898 4.65241380889646 4.38093019089821 4.39203431670446 4.74595045518599 5.28901062649177 3.61878614676665 4.76197018474042 4.86708777952041 4.74639031157218 4.61197246837028 4.29451362217579 4.65129464033138 4.23489865116719 5.14606386010837 3.78979898410662 0.252623970127602 0.256514124852154 0.255814355862941 0.249688701553078 0.242453055310484 0.267699917000074 0.242070357286920 0.250250967730168 0.264484524062906 0.241149384784271 0.242844817673882 0.254730730441934 0.242218164870197 0.24702377626155 0.266128934845879 0.252804400591925 0.258989790737790 0.257063139276988 0.257328305028428 5 5 - 6607639 6608103 6607852 6607373 6609628 - gene protein_coding_gene TRUE TRUE AT5G19580.1 glyoxal oxidase-related similar to glyoxal oxidase-related [Arabidopsis thaliana] (TAIR:AT1G67290.1); similar to Os01g0677000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043851.1); similar to Os05g0559000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056298.1); similar to glyoxal oxidase [Vitis pseudoreticulata] (GB:ABA42922.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Glyoxal oxidase, N-terminal; (InterPro:IPR009880) -0.574899960490036 -4.20201272801707 0.00161105833680358 1 5.08679532246155 8.79233405921959 -0.574899960490036 0.181280662963054 AT5G65180_at 5.19687907148991 5.32147715870633 5.87761825514917 5.83620699754055 6.37810921107648 6.25302802116822 5.39142543803185 5.35375334875032 5.10467498414245 5.10264924715499 5.68632049582833 5.51768108452658 5.78897421483823 5.48384090383654 6.07549897264674 5.57168053562891 5.96294111810126 5.58679750517082 5.34718959258103 0.189194455804974 0.190763486930885 0.201552636612616 0.190140643017674 0.195524468129152 0.1969377248571 0.188952437397961 0.19784404816319 0.192010227934184 0.195316357481421 0.193709906985811 0.19337095845232 0.196670696027313 0.196756001986472 0.188498298675990 0.191877121658284 0.192228131630116 0.193819032027184 0.193162583991284 5 5 + 26064246 26065002 26064749.364 26062587 26065257 + gene protein_coding_gene TRUE TRUE AT5G65180.1|AT5G65180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to 4D11_9 [Brassica rapa subsp. pekinensis] (GB:AAZ67523.1); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072); contains InterPro domain Protein of unknown function DUF618; (InterPro:IPR006903)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to 4D11_9 [Brassica rapa subsp. pekinensis] (GB:AAZ67523.1); contains InterPro domain t-snare; (InterPro:IPR010989) -0.343384949474595 -4.20032891693311 0.00161552622895691 1 5.0843805237182 11.1480895852966 -0.343384949474595 0.0320520718383349 AT5G19880_at 1.57235583350808 1.23858965050675 2.35543395143978 2.23533576978356 1.33956568403448 1.26133778318574 0.738254275193581 0.971593108262266 0.709020109045459 0.917683094448478 0.796383435652668 0.82952709966226 1.13012861957621 1.18258968984374 1.34729573818984 0.849861214914872 1.29593494325195 1.40341693316228 0.89971377344009 0.205952880097617 0.207808972714561 0.212496759621169 0.217921292296703 0.208115374021782 0.210318730474149 0.20909088155863 0.215400224197449 0.215898474225709 0.211783629166718 0.216597708093106 0.208620362055438 0.205952880097617 0.209945960512027 0.211800260538804 0.215710379355011 0.206946446848709 0.205952880097617 0.205952880097617 5 5 - 6720704 6721172 6720913.909 6720386 6722477 - gene protein_coding_gene TRUE TRUE AT5G19880.1 peroxidase, putative Identical to Peroxidase 58 precursor (EC 1.11.1.7) (Atperox P58) (ATP42) (PER58) [Arabidopsis Thaliana] (GB:P59120); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06720.1); similar to peroxidase [Solanum lycopersicum] (GB:CAA50597.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.38502766692988 4.19969035166702 0.00161722401757554 1 5.08346462361398 2.43732385778582 0.38502766692988 0.0747127418446822 AT5G41890_at 1.21372146082387 1.23597680619417 1.54233886236392 1.49874295608542 1.89092223439508 2.17078788989782 1.27427527533574 1.01089466399765 1.39214109272506 1.51816122703934 1.90917774087605 1.76746936001470 1.46623771460628 1.94971267345501 1.62004659822822 1.60797726630861 1.73612670199679 1.56832430022475 1.09596291987021 0.195194827809410 0.194985146719391 0.193674497604654 0.194418348278808 0.209341593454441 0.197629046894749 0.208438899101387 0.204852056136886 0.198177447569884 0.197659518736406 0.218968594567250 0.198241256289924 0.193674497604654 0.202530233910354 0.198494159558223 0.197497838680452 0.198399320182675 0.193674497604654 0.202439817077841 5 5 - 16781528 16782508 16781894.727 16781520 16784128 - gene protein_coding_gene TRUE TRUE AT5G41890.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G50400.1); similar to H0404F02.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66728.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.375070794690129 4.19492613890041 0.00162995004699171 1 5.07662924861334 2.99898541414104 0.375070794690129 0.0670438950292638 AT5G50330_at 2.69449059191486 2.85835485145267 3.38588452774957 3.06608187552947 4.47478600119674 3.40376264491014 2.17598177060299 1.62714166494024 2.79361255728035 2.52919478003248 4.01361058906911 4.14867420037899 3.07759241401524 3.79019006183552 4.09398578330336 3.7146898314989 2.85514312256869 3.56064967129764 2.73794607436797 0.239036334397296 0.239036334397296 0.242580884052477 0.241753832842303 0.239036334397296 0.253246768553397 0.247995310911550 0.247661184295357 0.253690193544257 0.242723117505672 0.239036334397296 0.239036334397296 0.243476089472497 0.24384705731622 0.239036334397296 0.241047883803375 0.249852346222961 0.265663667735261 0.246986187578672 5 5|0 -|/ 20502798 20504225 20503328.222 20502449 20505910 - gene protein_coding_gene TRUE TRUE AT5G50330.1 ATP binding / protein kinase similar to ATP binding / electron carrier/ heme binding / iron ion binding / protein kinase [Arabidopsis thaliana] (TAIR:AT4G24810.2); similar to Os01g0904200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045121.1); similar to ABC transporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB90550.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.651706689440308 4.19330953480647 0.00163429207907987 1 5.07430904379111 6.13267787260685 0.651706689440308 0.217350162809696 AT5G28220_at 4.11530422325101 3.95737809681195 5.27454053793299 5.18532926991725 5.27067416153612 4.95569549537832 3.8362404290057 2.78096423546055 2.46524344621907 2.24075206959424 3.57795749926534 3.84774607576149 3.30981121368576 3.67520324068825 3.66167358627716 3.50906936760766 3.09369794391703 3.37574566135804 2.73223229862633 0.254054198534328 0.249251011254819 0.245810485060927 0.245810485060927 0.247654450489801 0.250858811404027 0.249557629374205 0.253317794848027 0.273963311969037 0.246317054144690 0.252111270636506 0.246056368718069 0.250556608913973 0.249980051223236 0.249406315026261 0.245810485060927 0.264331804620859 0.246394905503625 0.247648668153024 5 0|5 /|- 10190643 10191445 10191061.125 10190361 10193123 - gene protein_coding_gene TRUE TRUE AT5G28220.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G04830.1); similar to O-linked GlcNAc transferase like [Nicotiana tabacum] (GB:CAC12882.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.598722359301939 4.19205286266298 0.00163767574175723 1 5.0725051425263 7.41490197868672 0.598722359301939 0.193149373059732 AT5G03300_at 9.54432437537463 9.64688166262649 9.89443604289215 9.80954754888377 9.46998239618374 9.65047678788661 9.85341184671974 9.96346723475663 9.49434890813073 9.6176114899174 10.3980957352236 10.6440241796963 10.0038170856542 10.1826154697093 10.6545090313061 9.98263707181757 9.90823441513843 10.1800093068681 9.48051550435877 0.100715037930152 0.100715037930152 0.108755115206073 0.100715037930152 0.107983848026834 0.109975536330962 0.107115786538219 0.100715037930152 0.119207886361397 0.107065507855602 0.102983917121733 0.103324415524691 0.101419079282559 0.107603435816833 0.104804471999304 0.108706228847170 0.109796762999213 0.109991226537552 0.104467174745361 5 5|0 +|/ 797921 798970 798457.9 796441 799175 + gene protein_coding_gene TRUE TRUE AT5G03300.1 ADK2 (ADENOSINE KINASE 2); kinase Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion. Identical to Adenosine kinase 2 (EC 2.7.1.20) (AK 2) (Adenosine 5'- phosphotransferase 2) (ADK2) [Arabidopsis Thaliana] (GB:Q9LZG0); similar to ADK1 (ADENOSINE KINASE 1) [Arabidopsis thaliana] (TAIR:AT3G09820.1); similar to adenosine kinase isoform 2S [Nicotiana tabacum] (GB:AAU14833.1); contains InterPro domain PfkB; (InterPro:IPR011611); contains InterPro domain Adenosine kinase; (InterPro:IPR001805); contains InterPro domain Carbohydrate kinase, PfkB; (InterPro:IPR002173) -0.350587614711666 -4.18983584015255 0.00164366311125643 1 5.06932209461284 19.61660003078 -0.350587614711666 0.0432340522060455 AT5G24430_at 7.1268487844232 7.51465847766616 8.26047175847133 8.56435422268865 8.79480967644127 7.95405697688945 6.32819263981605 6.44751176847037 5.36880530145203 6.19230406056045 7.55825034424509 7.81431331780347 7.50226512182473 7.61099712289681 7.08649235320663 7.76859068745702 7.20145639744865 7.04012757244242 5.96179282238784 0.206001928866925 0.199459924390107 0.205862958083130 0.201520440901583 0.208421124412342 0.216097533960232 0.209676821786656 0.216345402867217 0.225955382923561 0.212547353724971 0.214975179017644 0.199459924390107 0.201497271687322 0.205588349155507 0.209298782536409 0.206946816621659 0.223956041847456 0.213272321187851 0.207229797590943 5 5|0 -|/ 8339406 8340854 8340223.8 8339147 8343105 - gene protein_coding_gene TRUE TRUE AT5G24430.1 calcium-dependent protein kinase, putative / CDPK, putative similar to CRK (CDPK-related kinase), calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase [Arabidopsis thaliana] (TAIR:AT3G50530.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT3G49370.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT2G46700.1); similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] (GB:AAL30818.1); similar to calcium/calmodulin-dependent protein kinase homolog|CaM kinase homolog|MCK1 [Zea mays] (GB:AAB47181.1); similar to serine/threonine protein kinase pk23 [Lycopersicon esculentum] (GB:AAL87457.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.549581482625635 4.18964329979758 0.0016441841737053 1 5.06904562214075 14.2682525428412 0.549581482625635 0.169897297904474 AT5G14250_at 6.56975006262849 6.79142608336214 8.26123096858097 8.31435140402587 8.30853349312834 7.7956813066655 7.18549783716091 6.00159915444996 5.3257914132473 5.47589943715861 6.88212626435864 7.14562279583143 6.88389246314666 7.09402116366262 7.24887376957869 7.2164277528097 7.48429788028983 6.99179043147114 4.87685276945778 0.211662384008139 0.209316753935558 0.209650507276568 0.206094932034 0.209538409196442 0.206665072363127 0.213073987385305 0.228316311139174 0.222087120041669 0.215127952374096 0.208269328392950 0.208081042254853 0.209218361268306 0.206619325183033 0.219075577935776 0.205397658385660 0.209433880354579 0.212551703851109 0.211827550607060 5 0|5 /|+ 4599398 4600525 4599980.857 4597889 4600762 + gene protein_coding_gene TRUE TRUE AT5G14250.1|AT5G14250.2 COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13) Encodes subunit 3 of the COP9 signalosome. Identical to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (CSN3) [Arabidopsis Thaliana] (GB:Q8W575;GB:Q93VY1;GB:Q9LYA4); similar to 26S proteasome regulatory subunit S3, putative (RPN3) [Arabidopsis thaliana] (TAIR:AT1G75990.1); similar to Proteasome component re (GB:ABE81110.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|Identical to COP9 signalosome complex subunit 3 (Signalosome subunit 3) (FUSCA protein 11) (FUSCA11) (CSN3) [Arabidopsis Thaliana] (GB:Q8W575;GB:Q93VY1;GB:Q9LYA4); similar to Proteasome component re (GB:ABE81110.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.671165351953987 4.18421232684129 0.00165895325242333 1 5.06124479281079 13.5757901746327 0.671165351953987 0.226734335362066 AT5G08460_at 2.01258845497735 2.36291001672361 2.47223064260039 2.95205933858096 1.93824234665086 2.09164921963909 2.21409383219738 2.46391913233223 2.70559828241851 2.80964872522263 2.18248087886585 2.56154232238193 2.09246109577629 2.56441315226288 1.81098373630089 2.69093055976481 2.44971799019754 3.05114354556975 3.08215156759094 0.221140274473062 0.220712241580373 0.221625033924311 0.223631768078546 0.224390474385518 0.227141943202926 0.220860636679231 0.224928296177671 0.228458542892766 0.232173314748356 0.236477195589225 0.221558572620770 0.230148687544957 0.23312268879424 0.228045624727445 0.226184709687445 0.236684562696519 0.229064936864266 0.228694462233726 5 5|0 +|/ 2734493 2735315 2734955.2 2733221 2735456 + gene protein_coding_gene TRUE TRUE AT5G08460.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G71250.1); similar to GDSL-lipase protein [Capsicum annuum] (GB:AAX20033.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.443691536881837 -4.18054335519964 0.00166900931753993 1 5.05597222211279 4.95909096557141 -0.443691536881837 0.114648828844163 AT5G46520_at 4.68195857563248 4.31045326671461 5.33931024760915 5.38869588217296 4.98378966386221 4.29707698784404 2.3362506891434 2.52924412369676 2.77838423948773 2.65886931457824 3.41816250503633 3.32546362525729 3.16966891335917 3.70867635473375 3.24859273648769 3.00222151696067 3.15082842196691 3.53241935545363 2.42225568165010 0.296467417367163 0.277219927985923 0.27583610634002 0.303559605136445 0.271660168422843 0.272254944219976 0.266529849087248 0.266144162018311 0.259613909790183 0.273888978068299 0.263187329458644 0.259613909790183 0.262243701531586 0.270302250069126 0.275606149941975 0.259613909790183 0.259613909790183 0.259613909790183 0.264676053446539 5 5 + 18888910 18889505 18889294.667 18884994 18889642 + gene protein_coding_gene TRUE TRUE AT5G46520.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46510.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.488312327495005 4.18020955628016 0.00166992737029097 1 5.05549242527137 7.2030177248656 0.488312327495005 0.139443395562669 AT5G65600_at 2.35661698152154 2.41225182127895 2.89127324384941 2.80999522218952 2.60110490550895 2.72890167798582 1.22619591598448 1.17684656763816 1.33649577821870 1.29714091967575 0.837918907788056 1.32521524314732 1.10749814418761 1.16044066518581 1.14455975924426 1.12535663092055 1.62744346918414 1.14669585130572 0.989808654848914 0.269874587008472 0.272999541978983 0.27837308717511 0.286825399498029 0.292749224571501 0.302363325874004 0.270745348954586 0.273477063598596 0.279036735187164 0.273644462059303 0.272253175676911 0.269874587008472 0.269874587008472 0.269874587008472 0.273317903569554 0.272992499804462 0.269874587008472 0.277769891818885 0.27629217524093 5 5 - 26233355 26233873 26233553.091 26233352 26235379 - gene protein_coding_gene TRUE TRUE AT5G65600.1 legume lectin family protein / protein kinase family protein similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G10530.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE89762.1); similar to 117M18_32 [Brassica rapa] (GB:AAZ66951.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.339501468797786 4.17350442609509 0.00168848105409524 1 5.04585090708081 3.47150139272038 0.339501468797786 0.0291989557520151 AT5G36900_at 3.55163027976886 3.07102192658556 3.52266051886066 3.07673809126127 2.92361150035493 3.53291201670428 3.24981114153261 2.98096305909406 3.80923228016273 3.33002891281965 3.34175903061137 3.42990820657737 3.17406172880743 3.30680283809417 3.6167572476722 2.92810690014694 3.66722854453655 3.43563573595412 3.08987737321766 0.185055672968499 0.185399158948467 0.185409961976607 0.189000863262515 0.188257267281819 0.185304904610333 0.195392368171797 0.185461010563788 0.187547962292361 0.188243336128197 0.187760173001130 0.183789500265269 0.189803760127791 0.191615965987657 0.186564840096747 0.184397705855264 0.187288653384167 0.188142872186984 0.183789500265269 5 5|0 +|/ 14564178 14564317 14564235.889 14564154 14565433 + gene protein_coding_gene TRUE TRUE AT5G36900.1 unknown protein -0.530852770651655 -4.172994318942 0.00168990137415243 1 5.04511712126127 6.62479125899529 -0.530852770651655 0.161725820330644 AT5G56970_at 2.63947159895681 2.66400316781743 2.74117789577467 2.96254425612643 3.02302051352485 2.94057577562532 2.44401818949882 2.49402149270633 2.73927458325876 2.91572016063485 2.26705169356888 2.44687633727865 2.52814655651153 2.80161444748049 2.16203979497874 2.50292404436208 2.13512991284961 2.64225363700729 2.82999819795137 0.189290345189918 0.186125503973817 0.188116030387305 0.19667440465124 0.191846613498397 0.194167203330421 0.186396350196097 0.186112156239007 0.195348224068356 0.184992693705316 0.188214620588983 0.184814556712910 0.189022077989687 0.185325455620923 0.191933291809860 0.187801412147018 0.191109063003871 0.194518064700563 0.187127664377027 5 5 - 23062261 23062940 23062580.727 23062170 23065494 - gene protein_coding_gene TRUE TRUE AT5G56970.1 CKX3 (CYTOKININ OXIDASE 3); cytokinin dehydrogenase It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. Identical to Cytokinin dehydrogenase 3 precursor (EC 1.5.99.12) (Cytokinin oxidase 3) (CKO 3) (AtCKX3) (CKX3) [Arabidopsis Thaliana] (GB:Q9LTS3); similar to CKX4 (CYTOKININ OXIDASE 4), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G29740.2); similar to cytokinin oxidase [Dendrobium cv. 'Sonia'] (GB:CAC17752.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR006093) -0.348160302957376 -4.17269269868367 0.00169074178100690 1 5.04468322343093 5.37064687806366 -0.348160302957376 0.0420000241136168 AT5G64640_at 3.76105605644569 4.00247937509688 3.87100218438082 4.1456972158321 3.83273368649201 4.20728402784027 4.54120049727313 4.64985011758897 3.14682831777850 3.74832839713471 4.44316141464146 4.56451801164156 4.78910990950912 4.37962235207365 4.96541258012589 4.49573909096111 4.21763035131553 4.21581069735005 3.83138046760716 0.206711686378121 0.20451690082901 0.202285400363651 0.205648443619145 0.208215865540073 0.20440863054888 0.202285400363651 0.209084924319599 0.209052382925659 0.202285400363651 0.207459704119928 0.204500326305683 0.202285400363651 0.205235329582314 0.207911077174166 0.205437723577099 0.209886426418004 0.204142684864650 0.202408051048574 5 5 + 25855724 25856252 25855932.636 25853953 25856425 + gene protein_coding_gene TRUE TRUE AT5G64640.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G09760.1); similar to 52O08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67549.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.407167111688975 -4.1706256667174 0.00169651295875531 1 5.04170929997209 8.16860686768161 -0.407167111688975 0.0925211925167317 AT5G19270_at 2.57079697330361 2.58147296366403 2.67378217306771 2.52795573930402 2.57319204386394 2.51374979805333 2.35353832266877 2.28070708405994 2.90315194320103 2.60927547376030 2.64772042920991 2.12432550618874 2.29648291695839 2.49923213124975 2.48895758999551 2.28799556485133 2.7080472349242 2.57556146821884 2.53075507830669 0.183778390450437 0.186197735663648 0.184301439592140 0.186384923459349 0.196023942325072 0.191670314076273 0.194148207250261 0.185089601010103 0.186189011305504 0.183778390450437 0.190914344125498 0.18430499119536 0.189101366293343 0.190854955457417 0.190779822709094 0.186991097777800 0.185336174566862 0.19645940198552 0.183778390450437 5 5 - 6485627 6486173 6485924.909 6485619 6487011 - gene protein_coding_gene TRUE TRUE AT5G19270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G34320.1); similar to 80C09_29 [Brassica rapa subsp. pekinensis] (GB:AAZ41840.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) -0.339655707890065 -4.16916956565581 0.0017005907923602 1 5.03961394891458 5.07669998072596 -0.339655707890065 0.0300822049841165 AT5G63060_at 6.84278234497512 6.89596834710442 7.21593649369151 7.2240971525491 7.97680024933453 6.82578804719308 9.02597308565736 8.75531002497569 7.15728134777966 8.15489318051599 9.37014679237592 9.1233379608287 8.83561178640179 9.00844886571847 8.97923410067458 9.13198270598034 8.0439773774977 8.82256481660145 7.9070377247405 0.234508363695252 0.233083055425105 0.253224232529351 0.240089825139285 0.219020595926494 0.235522344409344 0.219674190487928 0.222381428700979 0.269139220591996 0.228250285401395 0.223051137528578 0.219020595926494 0.233411116611184 0.229409695596585 0.220176749055824 0.219020595926494 0.247522925676099 0.248310233175953 0.222455173443796 5 5|0 -|/ 25312310 25312986 25312640.857 25312180 25314075 - gene protein_coding_gene TRUE TRUE AT5G63060.1 transporter similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G08690.1); similar to Os02g0321500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046687.1); similar to Phosphatidylinositol transfer protein PDR16 and related proteins (ISS) [Ostreococcus tauri] (GB:CAL56738.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251) -0.620243704191614 -4.16690693999738 0.00170694768941173 1 5.03635734318612 15.9224072024044 -0.620243704191614 0.204832907539922 AT5G02760_at 9.09885312762974 9.3192984651939 7.95567313568874 8.3542922383446 9.63845002528572 9.51669752023643 6.20310064649124 6.86626201707693 10.9879111646791 9.4256371248816 11.9981853915262 12.2438025884699 12.0790680135195 11.4099106885069 12.4148544465586 12.0505571770740 11.1364187281706 11.5818705631088 11.1033932118095 0.134732525422258 0.125865781640845 0.149440710814239 0.138799317183901 0.128418758374099 0.125865781640845 0.178843476173962 0.147361140289281 0.129168054200626 0.140765510006408 0.127581973786062 0.126183336082588 0.125865781640845 0.135450489001046 0.129575832624014 0.129406946173673 0.131555567173640 0.128473409505344 0.129087858947425 5 5|0 +|/ 626022 626751 626384.8 625252 627122 + gene protein_coding_gene TRUE TRUE AT5G02760.1 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT3G12620.2); similar to protein phosphatase 2C homolog [Mesembryanthemum crystallinum] (GB:AAD11430.1); similar to Os06g0717800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058597.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.489084356551159 4.16472123676791 0.00171311210239192 1 5.03321069724562 19.5540687053635 0.489084356551159 0.140813763452835 AT5G64200_at 7.24499082681226 7.09535338072301 7.81334385547291 7.79991698005721 8.02156857959133 8.08063695034374 6.80027697863254 7.45075617309542 6.42406596523526 6.70211444411703 6.81860522377837 7.17791006934649 7.14186820370402 6.95864359399772 6.89430304367642 7.07415748682633 6.9176595711949 6.83003902313203 6.68579425552286 0.201092423226786 0.189450436309174 0.200075801476043 0.191739120554953 0.195945688025954 0.193194472158917 0.192191283764691 0.189896753841010 0.205236769940169 0.201327984156143 0.194496706350374 0.189874004002124 0.194053366764064 0.195651205277305 0.1938356701289 0.191295087479259 0.197222912460336 0.191868407513298 0.192709827586231 5 5|0 -|/ 25699167 25699983 25699531.111 25698428 25700867 - gene protein_coding_gene TRUE TRUE AT5G64200.1|AT5G64200.2 ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA binding encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks. similar to SCL30a (SC35-like splicing factor 30a), RNA binding [Arabidopsis thaliana] (TAIR:AT3G13570.1); similar to putative ar (GB:CAA76346.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.443894168168135 -4.16101783999579 0.00172361018445514 1 5.02787741311945 14.3286753815488 -0.443894168168135 0.115983283443733 AT5G10520_at 1.79614892830517 1.85663477390276 3.07056156600981 2.77655956433775 2.04796239538126 2.12739610680752 1.20552342792723 1.56115282808709 1.75114285051096 1.85654255250139 1.84898881014031 1.95331559330819 2.05154184554593 1.82926819126732 1.90176937748385 2.19345960806441 2.00600380609456 1.74046310315596 1.60893950604177 0.214019514626622 0.210856440538079 0.214902497313979 0.216008683557485 0.217355347509601 0.210856440538079 0.215191984701253 0.211616420753679 0.234280984321999 0.215759619882786 0.220185127726244 0.218676390765377 0.219941999093812 0.215366219157309 0.215168655380608 0.213071536685371 0.227985203269621 0.213927186543729 0.222404711877149 5 5|0 -|/ 3320591 3321461 3321014.3 3320371 3322911 - gene protein_coding_gene TRUE TRUE AT5G10520.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G65530.1); similar to putative receptor protein kinase PERK1 [Oryza sativa (japonica cultivar-group)] (GB:BAD45880.1); similar to Os06g0663900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058295.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.390681772699238 4.1603530633236 0.00172550175814115 1 5.02691983911681 3.89498057962846 0.390681772699238 0.0816989765218116 AT5G17010_at 6.06055717833055 6.4434052464942 7.08535334777847 6.91069343304407 7.19701628250838 7.3462940627523 7.32301986547647 7.33884518003495 5.21301050238193 5.56100678396934 5.91642938621943 5.8566317772891 6.80676874110858 5.9187613480919 6.06654158099205 6.52196945560522 7.39109137390538 6.27183550323327 5.31872104401202 0.197393698234856 0.201156110619583 0.192547309880176 0.193577745791195 0.207096397974842 0.190843669543171 0.199612026928248 0.196362393849995 0.222797816184771 0.196411906700922 0.194036582740137 0.197610017997002 0.195279907308655 0.211332807380953 0.197505003132995 0.190843669543171 0.207428335842859 0.192714735533407 0.194061954798551 5 5|0 -|/ 5587902 5589572 5588766.9 5587354 5592449 - gene protein_coding_gene TRUE TRUE AT5G17010.1|AT5G17010.2|AT5G17010.3 sugar transporter family protein Identical to D-xylose-proton symporter-like 2 [Arabidopsis Thaliana] (GB:Q6AWX0;GB:Q9LFK1); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT3G03090.1); similar to Os10g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065505.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91902.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828)|similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT3G03090.1); similar to Sugar transporter superfamily; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91902.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.384581659683485 -4.15796047510075 0.00173232770177481 1 5.023472881644 12.8171479525158 -0.384581659683485 0.0773174899312881 AT5G26920_at 9.07677605587258 9.33944122881291 10.7819002231799 10.9005626655169 10.2040246757656 9.86248065585024 6.69801876680216 6.47017100862261 5.34059894366876 4.20805054080759 4.91127996312001 5.97382262395516 4.3362228361719 5.37064144792177 4.78376157683541 3.51595210231513 4.30397889945232 4.21894815730139 3.48212608183194 0.188837003263828 0.188837003263828 0.189291154547924 0.188837003263828 0.188837003263828 0.188883518791922 0.195120881502993 0.198197405719762 0.189545797205887 0.191235371914169 0.192479894056714 0.189439661008544 0.188837003263828 0.193239946635144 0.192834227282842 0.194105603670505 0.206186627757093 0.191744468189513 0.188837003263828 5 5 + 9477770 9478403 9478063.545 9475750 9478724 + gene protein_coding_gene TRUE TRUE AT5G26920.1 calmodulin binding similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to hypothetical protein MtrDRAFT_AC146914g39v1 [Medicago truncatula] (GB:ABE91845.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 0.3975424002479 4.15734654982962 0.00173408375599521 1 5.02258826799742 13.6768808132130 0.3975424002479 0.0868107960830269 AT5G28060_at 9.49681477573232 9.65154729894394 9.4975236190871 9.56808935067147 10.2723162346330 10.0103168104904 9.79724026064554 9.51263117331368 9.02959756476133 9.25141860250149 9.83882776386888 10.1035974292646 9.37655378107622 9.67709638832831 9.75018270369328 9.35164333481182 9.58389526593098 9.55272443605233 9.37815381255423 0.133622939931896 0.131074780024736 0.132831233907157 0.134214718926839 0.137100666774074 0.131137190530209 0.135163495360188 0.137679618111565 0.148713197904206 0.137334117524638 0.130241151534643 0.134918790572018 0.135467442109863 0.131390928168994 0.135072571284217 0.130307188429418 0.138807536021749 0.143040332555752 0.134743605091899 5 5|0 -|/ 10070168 10070764 10070435.8 10069550 10070903 - gene protein_coding_gene TRUE TRUE AT5G28060.1 40S ribosomal protein S24 (RPS24B) Identical to 40S ribosomal protein S24-2 (RPS24B) [Arabidopsis Thaliana] (GB:Q8LC83;GB:Q94F06); similar to 40S ribosomal protein S24 (RPS24A) [Arabidopsis thaliana] (TAIR:AT3G04920.1); similar to ribosomal protein S19 (GB:1909359A); contains InterPro domain Ribosomal protein S24e; (InterPro:IPR001976) -0.378981767469165 -4.15569575888616 0.00173881488021887 1 5.02020933059882 19.1628291726817 -0.378981767469165 0.0731281806848945 AT5G67590_at 10.2137405669501 10.1489091184367 11.1100754881745 11.0180802862974 10.9929958772321 10.7486444488189 10.2712965129262 10.1680000849473 10.1374926997421 9.8037928424621 11.148136339642 11.1572759907939 10.8108462967216 10.9250775485148 11.2604556090689 11.0019216052714 11.0358936478851 11.0000188363608 9.64519326363336 0.0723705301736838 0.0736967402510536 0.0735158067393254 0.0715749926318565 0.0712436099469518 0.0731304686401843 0.073041153527262 0.074352460921766 0.0783150286881022 0.0779217596208066 0.0739755866713196 0.0731399881916651 0.0721488309796076 0.0748893102666224 0.0755189192219518 0.0712436099469518 0.075947527636692 0.0756129312327182 0.0771193982314111 5 5 + 26975309 26976525 26975675.273 26975227 26976783 + gene protein_coding_gene TRUE TRUE AT5G67590.1 FRO1 (FROSTBITE1) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain. similar to NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa] (GB:ABK78688.1); contains InterPro domain ETC complex I subunit conserved region; (InterPro:IPR006885) 0.353398315557222 4.15469906445592 0.00174167792161778 1 5.01877280068704 21.036274216087 0.353398315557222 0.0498697802872125 AT5G05210_at 5.29158980224619 5.41980958873539 6.26320134388665 6.31988877817373 6.27732881626199 6.08099513073814 5.85825838925392 5.09984474886712 5.70315542320481 5.07833267515725 5.89789168439601 6.0316595489546 5.85520673001599 5.68021753744671 5.55113387384132 6.01732514634282 5.68358919679025 5.46150063693726 5.8393595230477 0.156899472325295 0.153522671131119 0.161145539126155 0.154837264242443 0.158440561789833 0.156935620209522 0.158718046701764 0.159349470519587 0.163991675985161 0.160846906041842 0.157081354674345 0.153949780030529 0.159198412129541 0.16211681476905 0.160381964786301 0.15355314469413 0.154285387593202 0.160087555353782 0.157181506996866 5 5 + 1549048 1549494 1549290.818 1547424 1549792 + gene protein_coding_gene TRUE TRUE AT5G05210.1|AT5G05210.2 nucleolar matrix protein-related similar to nucleolar matrix protein-related [Arabidopsis thaliana] (TAIR:AT2G27750.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71277.1); contains InterPro domain Surfeit locus 6; (InterPro:IPR007019) -0.48188296273594 -4.15262419788721 0.00174765389419403 1 5.01578181486983 11.4826636171757 -0.48188296273594 0.137727154844973 AT5G05730_at 9.97686890749564 10.1798346162415 10.4399317781327 10.5746452973993 10.2406970455334 9.87191485896459 7.6725349271553 7.91668592825095 8.7772029400527 8.70437513026343 9.7383560170284 9.9663861510601 9.2338654181822 9.55745312544353 9.72141904659316 9.52110961067724 9.09668361252126 9.67874939495832 8.47117968954409 0.104775006885293 0.0995657481472638 0.102362628423457 0.0994848522651031 0.103000610131953 0.103410651223420 0.113638855544100 0.111415519287367 0.110492046837299 0.099197578097214 0.102069940152996 0.100579923201290 0.0988015639830271 0.0988015639830271 0.10152883483182 0.0988015639830271 0.111712018177975 0.103555030167683 0.113690573936510 5 5 - 1719754 1720339 1719962.727 1719574 1722904 - gene protein_coding_gene TRUE TRUE AT5G05730.1 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1); anthranilate synthase ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. Identical to Anthranilate synthase component I-1, chloroplast precursor (EC 4.1.3.27) (ASA1) [Arabidopsis Thaliana] (GB:P32068); similar to anthranilate synthase, alpha subunit, putative [Arabidopsis thaliana] (TAIR:AT3G55870.1); similar to ASA2 (anthranilate synthase 2), anthranilate synthase [Arabidopsis thaliana] (TAIR:AT2G29690.1); similar to anthranilate synthetase alpha subunit [eukaryotic synthetic construct] (GB:BAD90675.1); similar to anthranilate synthase alpha 1 [Camptotheca acuminata] (GB:AAU84988.1); similar to anthranilate synthase alpha subunit (GB:AAA74901.1); contains InterPro domain Anthranilate synthase component I; (InterPro:IPR005256); contains InterPro domain Anthranilate synthase component I, N-terminal; (InterPro:IPR006805); contains InterPro domain Anthranilate synthase component I and chorismate binding protein; (InterPro:IPR005801) 0.397874391715109 4.1523129828677 0.00174855209659767 1 5.01533313119187 18.7167251950691 0.397874391715109 0.0873802375660124 AT5G62180_at 1.73431722996208 2.1064014441819 3.08798935294407 3.23144295636486 2.40692958549552 2.33849174259135 1.94062677463221 2.17494804767126 2.60269332218522 2.12359519966644 2.93324583877118 2.92160910509767 2.80452130823264 2.76800938381731 3.02627155069177 2.8278185655908 2.68772222556420 2.86851009852803 2.19756986164519 0.202468651157995 0.189869194734028 0.202740339565928 0.207360407115847 0.195264127611108 0.202347189166569 0.193530501012243 0.197216866735890 0.202404333344815 0.199666536160334 0.189869194734028 0.193368811482326 0.195051208179589 0.199569570667736 0.198303528026357 0.191492181979055 0.208026547625316 0.190572117704325 0.193994318967177 5 5 - 24996170 24996666 24996457.182 24996070 24997075 - gene protein_coding_gene TRUE TRUE AT5G62180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45600.1); similar to CXE carboxylesterase [Actinidia arguta] (GB:ABB89014.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.388359796215777 4.14698756535438 0.00176399697640713 1 5.00765307420296 4.95897654374823 0.388359796215777 0.0809140756914254 AT5G20270_at 5.32314341928266 5.67739596010013 7.1535429115919 7.39767557450879 8.58481376948876 8.48617239881583 7.85215256092871 8.02294103048738 8.11648589990799 7.22732029068894 10.0629913713327 9.27834035457281 9.54895007820913 9.64892145907178 9.01952589909404 8.47705715722978 8.22943762088 8.96278132877235 7.71874479399763 0.219739045122021 0.214586200652507 0.187801652297493 0.197933446921556 0.188418796937332 0.187801652297493 0.201642956130258 0.193866486497737 0.200553271982596 0.192868286281692 0.187801652297493 0.187801652297493 0.187801652297493 0.191456821283567 0.188247394823628 0.187801652297493 0.193409599495080 0.194242104377461 0.192461441674619 5 5 - 6841029 6841602 6841320.818 6840835 6842860 - gene protein_coding_gene TRUE TRUE AT5G20270.1 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors similar to HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) [Arabidopsis thaliana] (TAIR:AT4G30850.2); similar to Hly-III related proteins [Medicago truncatula] (GB:ABE86349.1); contains InterPro domain Hly-III related proteins; (InterPro:IPR004254) 0.389600986317195 4.14587281407677 0.00176724803634957 1 5.00604488060482 15.7327385299056 0.389600986317195 0.081903399541697 AT5G14390_at 4.93453919256546 5.21794461227422 5.2164254497083 5.18900220163382 6.49695877990177 6.24221525935652 4.95610634515976 4.84052677982447 4.92465942536431 5.09622789395653 5.74739606998839 5.52636287174987 5.69506339324937 5.34039861816618 5.63451957790699 5.82077732349661 5.7514571497405 5.7985904455259 5.749463039855 0.225811402116216 0.223054436233003 0.225850227172509 0.227454210467737 0.228009383493946 0.235095643473921 0.218762142746235 0.222125545413111 0.235228861411105 0.223461996999861 0.225701252131043 0.216821484189944 0.221166210660601 0.231655132242334 0.219141668584705 0.217278083584805 0.218577379473189 0.21640325061099 0.231593063474900 5 5|0 -|/ 4637625 4638142 4637861.8 4637315 4639759 - gene protein_coding_gene TRUE TRUE AT5G14390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01690.1); similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABD32255.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) -0.372955533203037 -4.14425984375681 0.00177196320871406 1 5.00371759330974 10.8472668946963 -0.372955533203037 0.069075384956375 AT5G11590_at 1.97883029793519 1.77936707015407 2.02615566310773 1.54843681567230 2.07891152833850 1.93146879240544 2.9591443113714 3.17463281979111 2.96135067190456 3.01918067445842 3.56483241418894 3.65028630992334 2.96755157277790 3.26489322185099 3.42675088392087 2.99344254375754 2.73420919672892 3.43086377986749 2.6737763913704 0.229294045748148 0.238860056747972 0.236614983913514 0.234774554205137 0.233764406565856 0.247420980834029 0.22953605927904 0.233371582837880 0.231198121327546 0.233980860137248 0.229138893852992 0.227985459032253 0.227985459032253 0.227985459032253 0.232951247379400 0.228141123269563 0.243670288657031 0.24566648111981 0.238023933394150 5 5 - 3727808 3728353 3728019.909 3727535 3728727 - gene protein_coding_gene TRUE TRUE AT5G11590.1 TINY2 (TINY2); DNA binding / transcription factor encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. similar to TNY (TINY), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G25810.1); similar to DREB-like protein [Cucumis melo] (GB:BAD01554.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.416429467026644 -4.14341719332341 0.0017744317509994 1 5.00250160892172 5.25405490549103 -0.416429467026644 0.100338212460502 AT5G65310_at 9.6160962467865 9.8191466525153 9.07465529705665 9.38588983420864 10.6036524677049 10.0734332941518 8.3616143519359 8.48267025821631 8.70188478103763 8.34967370090977 10.3885074903034 10.8109551450987 10.5160662825894 10.0429381762131 10.4704367728789 10.4357180431157 9.84685741228297 10.2619186352211 9.20244243916775 0.157846521902787 0.157623027990438 0.154209976630501 0.156109895211820 0.156644791030413 0.159810336209298 0.170938110622827 0.165784142769138 0.173271613967482 0.171018321387932 0.159585580488515 0.153494367777469 0.153520070625134 0.157079835853834 0.157221498854067 0.153329230947012 0.170032230376206 0.157536817810183 0.164197327149624 5 5|0 -|/ 26119692 26120768 26120112.8 26119165 26121840 - gene protein_coding_gene TRUE TRUE AT5G65310.1|AT5G65310.2 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); transcription factor|ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5) encodes a class I HDZip (homeodomain-leucine zipper) protein Identical to Homeobox-leucine zipper protein ATHB-5 (Homeodomain transcription factor ATHB-5) (HD-ZIP protein ATHB-5) (ATHB-5) [Arabidopsis Thaliana] (GB:P46667); similar to ATHB6 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 6), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22430.1); similar to homeodomain-leucine zipper protein [Brassica napus] (GB:AAR04932.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047)|Identical to Homeobox-leucine zipper protein ATHB-5 (Homeodomain transcription factor ATHB-5) (HD-ZIP protein ATHB-5) (ATHB-5) [Arabidopsis Thaliana] (GB:P46667); similar to ATHB6 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 6), transcription factor [Arabidopsis thaliana] (TAIR:AT2G22430.1); similar to homeodomain leucine zipper protein HDZ1 [Phaseolus vulgaris] (GB:AAK84885.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) 0.437515574869449 4.13279965421936 0.00180584603467195 1 4.98717064105844 18.9761489928643 0.437515574869449 0.113990794259646 AT5G46880_at 1.82102229464430 2.18168798926251 1.17613856808456 1.37060304872394 1.54309909212688 1.44775079979107 1.69937323581098 1.87378895923867 2.31379151972288 2.44237048489054 2.30849827510586 2.74769513544209 2.66407166552481 2.23642692123881 2.63010518573017 2.28689400855456 1.88037058074542 2.65497430183861 2.27349693031562 0.23565756677808 0.229990786124066 0.236974603528971 0.227549142595416 0.235227397535186 0.228816335786108 0.225959345791225 0.233180290710612 0.231687940514367 0.260110258828786 0.226863579168610 0.228766965604086 0.232473551335453 0.227109222195769 0.227383501120554 0.233921981094763 0.257891199320929 0.232886022087327 0.237529228416224 5 5 + 19051873 19052581 19052331.8 19048767 19052615 + gene protein_coding_gene TRUE TRUE AT5G46880.1 HB-7 (homeobox-7); DNA binding / transcription factor similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G17710.1); similar to homeodomain protein GhHOX2 [Gossypium hirsutum] (GB:AAM97322.1); similar to putative outer cell layer homeo domain protein [Oryza sativa] (GB:AAL67592.1); similar to homeodomain protein BNLGHi6863 [Gossypium hirsutum] (GB:AAQ16127.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) -0.383990552085412 -4.13031959214519 0.00181326734246331 1 4.98358711494857 4.02385757558481 -0.383990552085412 0.0788127340690382 AT5G03120_at 4.24534819233866 4.24428923116415 4.71484834252867 4.88433326882657 3.83736478923159 4.25130889704009 6.15656460018783 5.78001247229748 6.84404779621222 5.78141704115867 9.9213716541497 8.01821539392108 8.58295761242429 8.66789117052871 8.22660337177598 6.94608004753013 6.71747823743266 7.6115438134661 5.92450628868734 0.256990489353522 0.26075091107184 0.257901813913613 0.257978887626949 0.264794212737341 0.259721558402000 0.255362593432782 0.257495929439196 0.258495959505397 0.265023324785383 0.270534809215428 0.258760697823777 0.270368224072391 0.258499393294734 0.262106583960034 0.254482955397187 0.261728429209255 0.263889462711537 0.260754620911754 5 5|0 +|/ 734066 734350 734234.333 733978 734942 + gene protein_coding_gene TRUE TRUE AT5G03120.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78315.1) -0.416197474790464 -4.12796221008220 0.00182035113199232 1 4.98017997960066 11.8991794098717 -0.416197474790464 0.101184085374040 AT5G65170_at 1.11727779065794 1.48437275424868 1.73888599792670 1.76131743016548 1.67661302893415 1.92957661867618 0.914547822136657 1.27730492028223 1.80863164508692 1.53615710131355 1.63812179565883 2.09105518102667 2.17008356059352 2.27183832485753 2.07228883077387 1.99473089681791 1.60858278741846 1.86036432671000 1.10477784374347 0.238020478181754 0.237509240634976 0.229038749666307 0.230112747993242 0.231901679930373 0.231351795604916 0.237620169295472 0.242641380451326 0.246837472644816 0.233171981347924 0.253657899094152 0.229038749666307 0.244764293318091 0.234090970950624 0.245794239757978 0.229038749666307 0.234648716483952 0.230491460214715 0.232887312211646 5 5 + 26058942 26059438 26059169.909 26058400 26059632 + gene protein_coding_gene TRUE TRUE AT5G65170.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT4G39720.1); similar to VQ [Medicago truncatula] (GB:ABE94086.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.413565557636438 4.12726920327916 0.00182243907813187 1 4.97917821175968 3.21077308356021 0.413565557636438 0.0995395580849067 AT5G39590_at 9.8935390683096 10.2270226907915 11.0591390908241 11.1290673027049 11.2271534412998 11.1743418218900 10.2743441350309 10.2547491058683 9.36120443818867 9.8230103061977 10.6925828693860 10.4493065060396 10.7395036540624 10.6703919824060 10.3432505753555 10.4203050441510 10.9171146651076 10.6639380385283 9.65108196961857 0.104562161064108 0.0993139903402421 0.0993659310891608 0.100478249887859 0.101803520024134 0.101611221537391 0.0993143686424842 0.100958066640452 0.122409484486284 0.110779881773416 0.101992272737396 0.101404936279286 0.105541644927194 0.102370987135233 0.102262839990425 0.101429918164751 0.108116733382411 0.108571984244847 0.106822361164025 5 5|0 +|/ 15870187 15870957 15870475.2 15868620 15871218 + gene protein_coding_gene TRUE TRUE AT5G39590.1 similar to hypothetical protein [Prunus persica] (GB:AAO14626.1); contains InterPro domain TLDc; (InterPro:IPR006571) 0.360840728457596 4.1268270868497 0.00182377243088234 1 4.97853907714105 20.7668269511971 0.360840728457596 0.0597663551168868 AT5G57970_at 2.35879888526098 2.82387218913666 2.06467489777185 2.13081801117291 1.73241816733566 2.16765988819018 2.126077614957 2.99132664994447 3.65047989082361 3.24137890124436 3.89654607449558 4.63219014353815 3.35600569727624 3.59958147021692 3.89209580603809 3.25341862905558 2.87354142439867 4.00911280856971 3.49290877458766 0.219217477859686 0.215485985630835 0.221992036182253 0.217930886702648 0.22425015267957 0.226525551108182 0.216201698193970 0.217065069086957 0.227639028836850 0.223638610230961 0.215115243066124 0.226925689787352 0.216338882520863 0.218569724781376 0.215498760390261 0.215430642560885 0.221513323658856 0.216384459784946 0.219335667803951 5 5 + 23485174 23486093 23485620.273 23483944 23486241 + gene protein_coding_gene TRUE TRUE AT5G57970.1|AT5G57970.2 methyladenine glycosylase family protein|DNA-3-methyladenine glycosylase I similar to methyladenine glycosylase family protein [Arabidopsis thaliana] (TAIR:AT1G80850.1); similar to Protein prenyltransferase, alpha subunit [Medicago truncatula] (GB:ABE92847.1); contains InterPro domain Methyladenine glycosylase; (InterPro:IPR005019); contains InterPro domain DNA glycosylase; (InterPro:IPR011257) -0.574641546082275 -4.12420346287738 0.00183170589170747 1 4.97474568511049 5.87478113576313 -0.574641546082275 0.186285877289693 AT5G25830_at 1.98918919523088 1.87823839444055 1.92834799099272 2.13873255306585 1.79543426085053 1.75194220333091 1.88124294011794 1.49608811499046 1.63085543510452 1.70230164656222 2.71395671819056 3.11570619287447 2.58951485795895 2.46512157948532 3.03410318154506 2.96318446574533 2.65513239442144 2.55446021972912 1.86357852902007 0.191900588249755 0.191118230620101 0.191272489523030 0.198591057719695 0.191118230620101 0.19482084125499 0.192090502892223 0.200405644564392 0.195935860421066 0.194482651676162 0.192152875251685 0.202014824922884 0.203767688126189 0.196071689489494 0.199074070555027 0.191625591474606 0.207321721308884 0.191160872572706 0.194939127001944 5 5 - 9004414 9004925 9004638.909 9004401 9005505 - gene protein_coding_gene TRUE TRUE AT5G25830.1 zinc finger (GATA type) family protein Identical to Putative GATA transcription factor 13 [Arabidopsis Thaliana] (GB:P69781); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT4G32890.1); similar to Zinc finger, GATA-type [Medicago truncatula] (GB:ABE78372.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) 0.383217431394118 4.12362652470744 0.00183345530768254 1 4.97391137230191 4.10422328403051 0.383217431394118 0.0786985072924233 AT5G38110_at 3.61366958559039 4.07351727644886 4.01673947892511 4.50056402290845 4.00949775542683 3.74877746588733 3.62436559264045 4.08494126996126 4.0897000974996 3.80572612296273 4.55594671965973 4.61257756879268 3.98182205439426 4.15989841872233 4.89699466495775 4.07185355829205 3.63652963352852 3.83578026736188 3.92056397025482 0.215012161819660 0.213827769804433 0.219512234255361 0.217816638902987 0.213655303310134 0.227276592881829 0.21411962014473 0.214673512258399 0.217906058256831 0.212882301790476 0.213833648710466 0.217760690848979 0.212785621937271 0.217531516945832 0.212785621937271 0.219554479151165 0.225685137777845 0.214243809093663 0.212785621937271 5 5|0 +|/ 15225949 15227265 15226960.7 15225700 15227445 + gene protein_coding_gene TRUE TRUE AT5G38110.1 ASF1B/SGA01/SGA1 (Anti- silencing function 1b) Identical to Anti-silencing factor 1-like protein b (Anti-silencing function 1b protein) (Silencing group A protein 1) (ASF1B) [Arabidopsis Thaliana] (GB:Q9LS09); similar to AtSP7 (Anti- silencing function 1a) [Arabidopsis thaliana] (TAIR:AT1G66740.1); similar to S-locus protein 7 [Brassica rapa] (GB:BAA85456.1); contains InterPro domain Anti-silencing protein, ASF1-like; (InterPro:IPR006818) -0.49657807449578 -4.12236500565415 0.00183728663119885 1 4.97208690685153 8.03780343478327 -0.49657807449578 0.147416888561711 AT5G56140_at 8.3681734199983 8.1447635440839 9.1527600805165 9.18803699094713 9.41396360447073 9.5239705740878 8.20997108366907 8.19398691089788 8.23624318155406 8.07205830431923 9.74004725171581 9.0738874363006 9.71316267693748 9.58359496383015 9.09282023395761 9.29321406115821 9.19698559961864 9.0037622221165 8.05637241424604 0.150955984409408 0.143478070508772 0.147307445700465 0.144348209530422 0.145396634637185 0.155221256522556 0.140880544637112 0.149779280023940 0.164443707169283 0.152651492055332 0.139988481346465 0.144755018862080 0.140842175303434 0.147218881765134 0.141272498266261 0.144227681049115 0.143542604855300 0.156020710351149 0.163063068873955 5 5|0 +|/ 22743950 22745102 22744661 22742595 22745569 + gene protein_coding_gene TRUE TRUE AT5G56140.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G26480.1); similar to putative KH domain protein [Oryza sativa (japonica cultivar-group)] (GB:BAD13019.1); contains InterPro domain KH; (InterPro:IPR004087) 0.345136787170177 4.12103354022380 0.00184133947390965 1 4.97016101808429 17.5038244122893 0.345136787170177 0.0436130234397324 AT5G28630_at 3.08679574272205 2.89787034793539 2.50020777510371 2.39693973591934 2.95215406944285 3.09197782293182 2.34436075235092 2.47402138648732 5.70518193276154 4.19332740723185 6.25653404572344 8.72312840241919 4.03648522802165 7.29644490742312 5.9225459154659 3.5953375280651 3.69536697379261 3.63876710192107 4.20941461526116 0.262915039631304 0.268896206977794 0.262915039631304 0.269170884822437 0.262915039631304 0.269296911885141 0.274724221990694 0.26778081920987 0.275044833541699 0.269591590921205 0.271389511986277 0.278469793260012 0.265756798148081 0.27267353043992 0.277553707092947 0.262915039631304 0.268670389237249 0.265097527735968 0.272054963755026 5 5 + 10636702 10637111 10636857.636 10636635 10637253 + gene protein_coding_gene TRUE TRUE AT5G28630.1 glycine-rich protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28610.1); similar to RPGR [Rattus norve (GB:AAX49610.1) -0.350158422193817 -4.11765459119231 0.00185166668606301 1 4.96527234623414 7.76714974474777 -0.350158422193817 0.0497722947888304 AT5G38710_at 7.88076071599335 8.11608594762671 9.31859615764836 9.31755753902776 9.45094975502748 9.15065323306088 8.74424246919032 8.82384849404196 4.66462469088111 6.47935893569927 6.88956538754227 4.92178092222623 8.28528477080292 7.67318579388296 5.86481026554643 8.67580710213494 9.06662374157906 7.1448305901693 5.56465198706692 0.163908873947983 0.163776257463065 0.168217638081775 0.174208468827498 0.171591606647998 0.166537113485486 0.169244304643130 0.166602680060184 0.187125769756846 0.173420201626628 0.176300289802065 0.171213660243612 0.162880579939416 0.172420164135256 0.179239245486555 0.163664621686815 0.166586559641561 0.169028821318203 0.189554138019044 5 5 + 15520352 15520889 15520687.818 15518475 15521339 + gene protein_coding_gene TRUE TRUE AT5G38710.1 proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative similar to ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5, PROLINE OXIDASE), proline dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G30775.1); similar to proline dehydrogenase [Glycine max] (GB:AAR86686.1); contains InterPro domain Proline dehydrogenase; (InterPro:IPR002872) 0.368330258205167 4.11428486379622 0.00186202607312097 1 4.96039528222497 15.2927274270944 0.368330258205167 0.0674456355573716 AT5G24010_at 2.64332262930107 2.9216509614233 3.77798693028238 4.21585828400765 3.59468530231114 4.04964961140004 3.03439608902723 3.11210762144372 3.07290410164855 3.44048651307277 5.02200046975054 4.21930088513663 4.82628991707632 5.01327002971613 4.61052002026167 4.35914457156872 4.06879098014174 4.24767847870967 3.46440340742731 0.223041372064360 0.216654725912281 0.220814207976436 0.218022992287885 0.219891050982253 0.233792927494052 0.215043901718451 0.221646725203603 0.230306325793236 0.215104840049886 0.223483442421528 0.218942735940745 0.237659555320374 0.227355869812324 0.230739275308088 0.216039133893674 0.218091958916912 0.229728142098335 0.218449944295722 5 5 + 8115810 8116352 8116141.818 8113798 8116618 + gene protein_coding_gene TRUE TRUE AT5G24010.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59700.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to Protein kinase [Medicago truncatula] (GB:ABE85317.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT07653.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.445921974903531 4.11296685048958 0.00186609445445195 1 4.95848722842718 7.35461005853026 0.445921974903531 0.120173921906348 AT5G15830_at 3.23878540128043 4.33699271605594 6.52459336402977 6.41016420522646 5.59209245557431 5.86113629283742 7.4049076241175 7.55076031412246 6.39325578268584 7.02487584220095 7.3584472061002 6.30908293398313 7.35439961927875 7.10488930091115 6.52316612755582 7.36007368715954 7.92218206320216 7.99413042770683 7.0049791399603 0.246594100577116 0.231440491956685 0.224789427616267 0.21720443081506 0.216395806164774 0.230552047563663 0.21520569460885 0.224517656118925 0.224025914199519 0.217004789955164 0.217815920141240 0.217462148118408 0.221287400818836 0.223703422521921 0.222693382192661 0.226087368853315 0.233186725992478 0.215470057775576 0.21520569460885 5 5 + 5168691 5169128 5168901.636 5168546 5169364 + gene protein_coding_gene TRUE TRUE AT5G15830.1 bZIP transcription factor family protein similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G30530.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96902.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.59764119718187 -4.10868358613673 0.00187938016136511 1 4.95228463194798 12.8891790511653 -0.59764119718187 0.198282506529120 AT5G66930_at 6.30664005048051 6.44941290181533 7.64002226298806 7.70906842345396 8.33263961898727 7.32568215460817 6.2650162029476 5.78890809660593 4.63891718717159 4.87271941639668 6.6529001122242 6.51293816697342 6.74705828455289 6.62686523141001 5.87859468575731 6.74036021877815 6.43963295405691 6.53071652327392 4.88072794631151 0.276551827501512 0.275471735289483 0.289245491062091 0.292659055595066 0.284445648169457 0.296520561677717 0.288959926400620 0.285233576251327 0.312823003456016 0.309779553680571 0.277529576739324 0.27687930824217 0.275471735289483 0.275471735289483 0.289774541373639 0.280832702858084 0.292660904086828 0.294303271627951 0.286173221356422 5 5|0 +|/ 26743371 26744310 26743997.25 26743082 26744984 + gene protein_coding_gene TRUE TRUE AT5G66930.1|AT5G66930.2 similar to Os12g0446700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066715.1); similar to hypothetical protein DDBDRAFT_0187874 [Dictyostelium discoideum AX4] (GB:XP_636793.1); contains InterPro domain Protein of unknown function DUF1649; (InterPro:IPR012445) 0.58924956989276 4.10293340396992 0.00189737165689847 1 4.94395340820554 12.6339677750300 0.58924956989276 0.194699473404443 AT5G20610_at 6.75650697778957 7.17574734875912 7.89875958324518 7.72689858061459 7.45068830110869 7.78026203763196 6.55265124273402 6.42450155213935 6.66079463428418 6.73132357520104 6.98679707787885 7.17323690915723 6.70896258810997 6.95758088535557 6.38237850000975 7.42206372408112 7.11212747720317 6.92261420170722 6.72039525170579 0.185905434722667 0.174417541431307 0.178277014469673 0.173514111044141 0.173432998306874 0.181211290530061 0.174305595135354 0.186957807789095 0.191417782437693 0.175936585316191 0.183969007425502 0.173313404393804 0.173313404393804 0.187194221684782 0.190427108979835 0.1789543395283 0.181628996895103 0.184823320887659 0.173313404393804 5 5 + 6972273 6972693 6972476.364 6968692 6972997 + gene protein_coding_gene TRUE TRUE AT5G20610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26160.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82279.1); similar to Os01g0714100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044057.1) -0.410707171953002 -4.0999114297144 0.00190689910158969 1 4.9395729723012 14.0519476150869 -0.410707171953002 0.0994635175034218 AT5G03130_at 3.20784619601491 3.80007477281646 3.11527458896822 3.65198864923143 2.77018152036713 3.08058252297911 3.46289912824881 3.66812584410858 4.05488198257795 4.2890928353484 5.37752148819458 6.06448343239095 5.64830032298365 5.0717335074545 5.52232811260082 5.46023986000735 4.45604888451544 4.92803784055453 4.88875722380204 0.205846423009339 0.210024161470934 0.209525041369838 0.219626159281336 0.212648730761656 0.208310211621056 0.224316206521059 0.212718678411509 0.221651274335408 0.212274216193108 0.205375693711014 0.212697500830710 0.209009475681479 0.211938029210349 0.206817465269174 0.204656181345456 0.215307620319460 0.205604557358526 0.204656181345456 5 5|0 +|/ 736167 736517 736335.7 736149 736559 + gene protein_coding_gene TRUE TRUE AT5G03130.1 unknown protein -0.503583520747979 -4.09880693324951 0.00191039374459241 1 4.93797162868244 8.20812033367376 -0.503583520747979 0.152569398104513 AT5G25610_at 12.1641599625092 12.6562956264138 13.5293321417854 13.5628711178102 13.6302381963494 13.7979179001158 13.3042396350093 13.4686993480659 13.2494990313542 13.2856655157977 14.4367489124680 14.0267057538726 14.208291623155 14.1061609278034 13.8031976468474 13.5474827443646 14.1087089499421 14.0828992082127 12.9324659673787 0.0701524536436967 0.0671998590366999 0.067011687835622 0.0674415594913843 0.0682552895079987 0.0688886178439778 0.0664133827982323 0.0676765938025196 0.0746997708393673 0.069893280742458 0.0664133827982323 0.0664133827982323 0.0664133827982323 0.0706877842207394 0.0668502817306876 0.0669691341708142 0.0748806541409204 0.067744185701448 0.0729388370953497 5 5 - 8914504 8915598 8914857.182 8914236 8916803 - gene protein_coding_gene TRUE TRUE AT5G25610.1 RD22 (RESPONSIVE TO DESSICATION 22) responsive to dehydration 22 (RD22) mediated by ABA Identical to Dehydration-responsive protein RD22 precursor (RD22) [Arabidopsis Thaliana] (GB:Q08298); similar to BURP domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G49320.1); similar to BURP domain-containing protein [Brassica napus] (GB:AAQ57584.1); contains InterPro domain BURP; (InterPro:IPR004873) 0.403082880415182 4.09811432733355 0.00191258857591222 1 4.93696736641449 26.8621698955124 0.403082880415182 0.0945464410114443 AT5G54840_at 5.05373497962196 5.13413610754655 7.59551182627428 7.7639956863887 7.71500425131718 6.38153437753899 6.07232951335613 4.9226970229904 3.86043384755537 4.73272524168124 6.18131430988964 5.92007641625603 5.66562651863552 6.36461958068845 5.28544856080743 6.21419018132827 7.01119338501439 5.87812755178782 4.7209792391594 0.258712522510914 0.257223279579964 0.262130483739273 0.263907676610767 0.252621566996689 0.266591812041785 0.257875951228492 0.267918703519787 0.259668550822941 0.256875753239944 0.250849609338482 0.250849609338482 0.264884132031890 0.255480447745316 0.257812699271302 0.250849609338482 0.258092665489495 0.256397397526991 0.25989845678193 5 5|0 -|/ 22293843 22295248 22294296.111 22293739 22295643 - gene protein_coding_gene TRUE TRUE AT5G54840.1|AT5G54840.2 GTP-binding family protein similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G21700.3); similar to putative Septum-promoting GTP-binding protein 1 (GTPase spg1) [Oryza sativa (japonica cultivar-group)] (GB:BAC79616.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806)|similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G21700.3); similar to putative Septum-promoting GTP-binding protein 1 (GTPase spg1) [Oryza sativa (japonica cultivar-group)] (GB:BAC79616.1); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.836104137457649 4.09029884129911 0.00193753898187913 1 4.9256300688561 11.5814283068874 0.836104137457649 0.306392190953998 AT5G51250_at 2.55848324200103 2.4951142461965 2.29456587342593 2.57799613406682 1.66618010179115 2.11990862100972 2.13568171550639 2.43789878081675 2.57884780187819 2.68525862220474 2.45775186761267 2.30146422684787 2.95626951629377 2.21366593067595 2.32819756883178 2.48207149871692 2.39371452889099 2.31611118519364 2.32998684541642 0.207038927461904 0.212184358047116 0.209555142677465 0.211904507774000 0.212582173090497 0.208590300216924 0.206169617273726 0.206169617273726 0.21166818347306 0.213069632792245 0.206602765579851 0.221260199649673 0.215394084614446 0.21108564598829 0.212631706309507 0.209348498059770 0.210695852491305 0.217208246400446 0.213999763528223 5 5 + 20848494 20849049 20848755.727 20847969 20849075 + gene protein_coding_gene TRUE TRUE AT5G51250.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39550.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.420778409623063 -4.08411643040580 0.00195751688994105 1 4.9166552127806 4.76698869612649 -0.420778409623063 0.106895834457097 AT5G67500_at 9.25069630590933 9.27319046380584 9.9555581695346 10.0475695814776 9.557562789193 9.5367436238386 9.2229442825088 9.27497212056095 8.25205630381325 8.1636272766962 9.56671602125098 9.72311884913426 9.6645294624204 9.5819365170525 9.84962570977166 9.61380884624084 9.35132532890082 9.5505229296015 7.48573730216458 0.119697991918577 0.124518447205588 0.120847462551262 0.120093642216036 0.120936587564826 0.125190118521512 0.12153886598555 0.123797464876395 0.145166099506534 0.137508811245338 0.119296452685738 0.120978299301070 0.119233555779525 0.120860937912921 0.123433223966865 0.120590173409593 0.129368534016542 0.119876560296435 0.166250955593907 5 5|0 +|/ 26953579 26954252 26953898.9 26952388 26954709 + gene protein_coding_gene TRUE TRUE AT5G67500.1 porin, putative similar to porin, putative [Arabidopsis thaliana] (TAIR:AT3G49920.1); similar to porin-like protein [Brassica napus] (GB:AAW22622.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) 0.327247558571013 4.08036415133654 0.00196974695286108 1 4.91120531437265 18.3048237932392 0.327247558571013 0.0190457807434526 AT5G13270_at 1.95039639402371 1.96824746302424 2.26177420079383 2.35726499886365 2.40535682045085 3.06492906920234 1.95295210048958 1.69779965153607 1.76196566546333 1.85707107838344 2.62390381983102 2.49153926199029 2.44197317610505 2.56629372228241 2.61600262836892 2.58624923843799 2.69594361536525 2.22169888351138 1.93722724877505 0.201083227615797 0.204506474658465 0.200172792707659 0.202033810776710 0.208604734713389 0.221359827238563 0.202883322502230 0.207495626559632 0.203695601963770 0.205797219591520 0.208993931796547 0.200172792707659 0.210065252428190 0.201709929254301 0.208940251381265 0.204621893810896 0.206665499744454 0.204863493226507 0.208009690867912 5 5 - 4246959 4247458 4247206.091 4246957 4249215 - gene protein_coding_gene TRUE TRUE AT5G13270.1 pentatricopeptide (PPR) repeat-containing protein similar to EMB2261 (EMBRYO DEFECTIVE 2261), binding [Arabidopsis thaliana] (TAIR:AT3G49170.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.447226663391615 4.07172763508144 0.00199820101715812 1 4.898653402048 4.39860935768661 0.447226663391615 0.123534302571812 AT5G06530_at 10.8316212424727 10.9374733265960 12.3484494665640 12.3817519684683 12.7500568530478 12.1514579003463 11.8144122398044 11.7429409401231 11.7199697820469 11.6795521053969 12.7723477680613 12.0674501552549 12.6821247007745 12.7483369158805 11.1270264513814 11.9672238168828 12.1024321726519 12.3739036676106 10.9376296775067 0.118472207274437 0.113926342347473 0.112824564079465 0.118100206355914 0.120705562527202 0.134963313598645 0.120273610403274 0.116147068307018 0.124891427984700 0.114300631903294 0.120373148079088 0.116627078117836 0.112824564079465 0.116596469811617 0.123623644458910 0.112824564079465 0.123118140896315 0.118938048095994 0.117546817443971 5 5 - 1990080 1990773 1990387.182 1989748 1994913 - gene protein_coding_gene TRUE TRUE AT5G06530.1|AT5G06530.2|AT5G06530.3 ABC transporter family protein Identical to White-brown complex homolog protein 23 (WBC23) [Arabidopsis Thaliana] (GB:Q93YS4;GB:Q94EX0;GB:Q9FG17); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G52310.1); similar to Putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:AAM51832.1); similar to Os03g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049014.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.417815280393911 4.06798100878751 0.00201067803739461 1 4.89320475367102 23.7076819393674 0.417815280393911 0.106078778604884 AT5G17600_at 5.07497415442154 5.27032908695782 5.88111278963703 6.13169931985684 6.57782347681203 6.63172383505986 5.82962480369722 6.6290081627611 5.80454029994073 5.92618850073031 5.95963545075816 5.85315148912767 6.18205852099688 6.33663721062786 6.18032729826461 6.8165064615536 6.33479004261789 6.24357925971077 5.57907832840948 0.213846719653933 0.192502563877494 0.195698481473088 0.193837345933449 0.198285594399471 0.193610013265947 0.189049652805497 0.193625527422424 0.188474497869403 0.187192412995196 0.187192412995196 0.190261306869671 0.187192412995196 0.193498751832653 0.192014467500144 0.191608598723033 0.202805337386976 0.187192412995196 0.192632746837778 5 5 - 5800039 5800545 5800325.455 5799907 5801246 - gene protein_coding_gene TRUE TRUE AT5G17600.1 zinc finger (C3HC4-type RING finger) family protein Identical to Probable RING-H2 finger protein ATL5G (ATL5G) [Arabidopsis Thaliana] (GB:Q9LF64); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G03550.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE85148.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.493191727580173 -4.06701492503391 0.00201390847644914 1 4.89179945576164 12.0074226668508 -0.493191727580173 0.149156271735591 AT5G01730_at 3.57659195535096 3.78337644537688 3.68343274392423 3.44264762328134 3.41230424502003 4.14203243112207 3.54968929638405 4.28092798326207 4.4402270743225 4.60436456701309 5.23821097909013 5.58608479576064 4.77183778620241 5.12463792372818 5.40188413735262 5.64030453244742 4.42835109991148 4.89684298235205 4.56156668213936 0.231036803735439 0.224224108978466 0.230806351745569 0.228897002121693 0.219630018159777 0.232050598493864 0.219982604004309 0.224806816821099 0.219630018159777 0.222025896395173 0.227743653361801 0.221191728439562 0.219630018159777 0.224770544661889 0.222694402804109 0.226741471899787 0.227730981250513 0.235738916926556 0.223084509166612 5 5|0 -|/ 273033 273794 273460.3 272829 277558 - gene protein_coding_gene TRUE TRUE AT5G01730.1 WAVE3 putative WAVE homolog Identical to Protein SCAR4 (AtSCAR4) (Protein WAVE3) (SCAR4) [Arabidopsis Thaliana] (GB:Q5XPJ6;GB:Q9LCZ7); similar to ITB1 (IRREGULAR TRICHOME BRANCH1) [Arabidopsis thaliana] (TAIR:AT2G38440.1); similar to SCAR-like protein 1 (GB:Q84TX2) -0.56818139202269 -4.06695406614619 0.00201411216095231 1 4.89171092370749 8.5695780341805 -0.56818139202269 0.187023221860542 AT5G62170_at 2.04451500256493 1.95298861229039 1.24239588389099 1.45190348996909 1.82800205800352 1.57519848106402 1.64709166979076 1.99667973120883 3.51617590210484 2.75664815660445 3.18045507775557 4.08861383086451 2.73592376612054 3.28306628110153 3.66442088197383 2.9421611180024 2.41730394295340 3.38249698492091 2.95149574562964 0.247565612267342 0.247438619210016 0.250871087621115 0.265237839747772 0.24667545409647 0.256431391632541 0.248005534636250 0.251032625632488 0.256283099073446 0.251949106070276 0.254250498728004 0.256544987173306 0.248971367943429 0.24667545409647 0.25881550051416 0.24667545409647 0.255705283449249 0.258756237528956 0.248131905192599 5 5 - 24990359 24990907 24990724.909 24990203 24992764 - gene protein_coding_gene TRUE TRUE AT5G62170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51850.1); similar to OSJNBb0085F13.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE02760.2); similar to B0616E02-H0507E05.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67833.1) -0.385650833742787 -4.06647989226399 0.00201569987900182 1 4.89102111909862 4.8606361178851 -0.385650833742787 0.0844946335618457 AT5G62940_at 3.53042853560072 3.43501158718093 3.18750380557635 3.51861973672712 3.29357813372485 3.67353338355244 3.56915161348871 3.77161469999417 3.49556359402953 3.08236822297467 3.81603027222584 4.22984462831146 4.04085406287877 3.8748604417062 4.19766845197676 3.845929426463 3.75828293105841 3.89250712903504 3.49171496586606 0.190657130902058 0.18575116076601 0.192320001435188 0.190481670691355 0.19311816420015 0.200235634872817 0.187789800269071 0.196012578017291 0.197235428869117 0.19096906568938 0.189815240914535 0.198370903400153 0.195966056900445 0.187755470561534 0.193102949556545 0.188658629693090 0.188847723330341 0.193436335992609 0.192297950612038 5 5 - 25274492 25274977 25274744.364 25274145 25275907 - gene protein_coding_gene TRUE TRUE AT5G62940.1 Dof-type zinc finger domain-containing protein Identical to Dof zinc finger protein DOF5.6 (AtDOF5.6) (DOF5.6) [Arabidopsis Thaliana] (GB:Q9FM03;GB:Q5HZ57); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24060.1); similar to Dof14 [Glycine max] (GB:ABI16015.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -0.401198486418725 -4.06562332791078 0.00201857130493297 1 4.88977494669203 7.15420323477084 -0.401198486418725 0.0954313622580093 AT5G63100_at 3.26761032550319 3.38665073952975 3.35115746952294 3.92668452568319 3.49869700779181 3.73633474105058 4.18737668821556 4.7045762354749 3.29889410970433 3.927700565609 4.57024754510082 4.22557526988754 4.48298267400066 4.14385344154147 4.50089891893239 4.65903262664847 3.88704372337008 4.16015128286312 3.60240462390334 0.238362359380545 0.237806402963814 0.232827889454469 0.234918133971891 0.231946080498414 0.238085506695834 0.240925516442892 0.237435414452443 0.251807653920328 0.235758404435262 0.231946080498414 0.235622699860232 0.234939441030987 0.24112389269705 0.231946080498414 0.238433637158606 0.241183536007253 0.23551426773634 0.232779322547658 5 5 - 25331740 25332235 25332010.727 25331363 25332654 - gene protein_coding_gene TRUE TRUE AT5G63100.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44600.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93757.1); similar to Os02g0489500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046867.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) -0.478391061718229 -4.06156360091981 0.00203223881788586 1 4.88386716444476 7.72658077577914 -0.478391061718229 0.141584636603686 AT5G66300_at 1.87353889731079 1.78145168759808 1.28024904013902 1.55151876529709 1.11333677434609 1.34816498968099 1.3065152777804 1.47839513430712 2.02713446260949 2.14166202077681 1.89767024989902 2.15616899663162 2.06078043972925 1.79628025502141 1.89241018923727 1.95564999847004 1.73137989325648 1.68456555858798 2.08463299986470 0.208863105918168 0.214612764680767 0.216844914716464 0.213922907416945 0.221596890015286 0.216109469264919 0.209828870895646 0.212746042380463 0.215166177144806 0.219909495003577 0.211387002282468 0.208863105918168 0.214323265885711 0.21610110190651 0.215215544738547 0.213227236636684 0.222404881626139 0.213194238280472 0.214868343981379 5 5 - 26497248 26497807 26497489.364 26497019 26498560 - gene protein_coding_gene TRUE TRUE AT5G66300.1 ANAC105/VND3 (Arabidopsis NAC domain containing protein 105, VASCULAR-RELATED NAC-DOMAIN 3); transcription factor Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. similar to ANAC076/VND2 (Arabidopsis NAC domain containing protein 76, VASCULAR-RELATED NAC-DOMAIN 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G36160.1); similar to hypothetical protein [Thellun (GB:ABB45858.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.367399825591543 -4.06148501576948 0.00203250433539332 1 4.88375278177255 3.45731616681801 -0.367399825591543 0.0706678405913413 AT5G51360_at 1.13447283026045 1.63799737934942 1.57909338477525 1.88189260292775 0.643012263033597 1.28718893542548 1.02039103080506 1.26229304093373 1.78314827906897 2.14056039050481 1.17150613099608 0.770543315707125 0.966906547804997 0.691376294500058 1.61015163559697 0.906221887625482 0.748882872610688 1.66804767853110 1.99079126589444 0.2474473792047 0.253488315782441 0.256983807094402 0.255863500078316 0.24438886343277 0.253602490196865 0.25094237121897 0.24438886343277 0.256715806623574 0.252501555847201 0.24438886343277 0.249906510502668 0.245381843938392 0.248760194285285 0.248989846781458 0.24438886343277 0.252321244127222 0.270130127949572 0.253380416909595 5 5 + 20889248 20889476 20889388 20889144 20889503 + gene protein_coding_gene TRUE TRUE AT5G51360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50373.1); contains InterPro domain Transcription factors TFIIS, elongin A, CRSP70, conserved; (InterPro:IPR010990) -0.506555829221894 -4.06037995938438 0.0020362418566596 1 4.88214424680062 2.82489494539433 -0.506555829221894 0.156583825200875 AT5G03050_at 5.55374060141693 5.59828342928289 6.48906662623292 6.37030256374482 7.22776687865326 7.19839058910617 5.34940416321813 4.87497258811841 5.92127618613009 5.72902256245511 7.79859867753141 7.02626621779891 6.76190254428586 7.62970273303313 7.34399304712533 6.8642802516742 6.6569731876969 6.93845314312824 5.58890388459509 0.221714040172428 0.220890210909145 0.227472800245510 0.225123012977122 0.216895366839404 0.225936775898105 0.220666636123529 0.233519843652166 0.228639564397611 0.217876346867713 0.225000029519273 0.216421998503095 0.222105117208077 0.232341432496599 0.227293484540462 0.216878678287166 0.223367329590100 0.226303368341579 0.222797448515795 5 5|0 -|/ 715304 715777 715514.875 715028 716320 - gene protein_coding_gene TRUE TRUE AT5G03050.1 similar to knotted 1-binding protein 36 [Nicotiana tabacum] (GB:ABC46407.1) 0.385765179701536 4.0583850190024 0.00204300733884214 1 4.87923992400918 12.5197019814772 0.385765179701536 0.0851381903137167 AT5G62020_at 5.30471665663913 5.66780649312177 6.49250940936892 6.92075292292993 6.90322102603039 6.72425896592084 6.2435380943078 6.38139730174937 5.1537298460212 5.12587031417504 5.01731873963575 5.10185429927474 5.91299994783136 5.43380364825712 5.01587873166899 5.75542488107347 5.79973173691595 5.54832921849469 5.05793921347990 0.199991217328288 0.209663690757261 0.226835930043526 0.223540245749814 0.213243372837687 0.234863250301452 0.210208123119326 0.208828534186201 0.206564611392342 0.199920712374647 0.203495456372193 0.199995084770020 0.198754893374495 0.203918360831005 0.206335946439681 0.199896350566549 0.21853572586654 0.210102151306699 0.196642770966673 5 5 + 24933832 24934366 24934049.818 24933315 24934869 + gene protein_coding_gene TRUE TRUE AT5G62020.1 AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor B-2a (AtHsfB2a) (Heat shock factor protein 6) (HSF 6) (Heat shock transcription factor 6) (HSTF 6) (HSFB2A) [Arabidopsis Thaliana] (GB:Q9SCW4;GB:Q0WMX0); similar to AT-HSFB2B (Arabidopsis thaliana heat shock transcription factor B2B), transcription factor [Arabidopsis thaliana] (TAIR:AT4G11660.1); similar to Os08g0546800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062423.1); similar to putative heat shock factor RHSF2 [Oryza sativa (japonica cultivar-group)] (GB:BAD09238.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.414649696720875 -4.05786269047887 0.00204478259919439 1 4.87847939705751 11.6101154962349 -0.414649696720875 0.104731578250864 AT5G52780_at 9.13146586831273 9.41976004201737 9.1856953172777 9.46434217970102 9.50988626427188 9.68776524652846 9.14013317056719 9.53544054501584 9.34113276133271 9.4743253443266 9.78236950198407 9.97773394175644 10.0653762737183 9.86945948654413 10.0216111168986 10.3485822578010 9.8291653350812 9.81399497854601 9.74706076209034 0.106956967367399 0.110705139407442 0.113157683198628 0.111783545312818 0.104354931124308 0.109714923254427 0.108397578692456 0.108743235940503 0.123796796820356 0.104497457282298 0.110015948919239 0.105607022119247 0.105900873283415 0.108668950895713 0.111392612269101 0.106598975614022 0.111698471348864 0.113261973063293 0.107681944504616 5 5 - 21408215 21408634 21408436 21408099 21408700 - gene protein_coding_gene TRUE TRUE AT5G52780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19100.1); similar to hypothetical protein MtrDRAFT_AC134521g30v1 [Medicago truncatula] (GB:ABE93878.1) -0.410479277485367 -4.05592041225337 0.00205139805589006 1 4.87565102197936 19.1264991962737 -0.410479277485367 0.102185292499782 AT5G26890_at 3.94449024794081 3.20642145358782 3.83214817754637 3.72850156042107 3.26378568336271 3.4213880494403 3.34488472866317 3.13822841629854 4.04337658709861 3.47031329337175 4.18385901539539 3.22837583255917 3.33076834781009 4.26391116112857 4.12195873048863 3.54983675752998 3.97711563992825 3.95554213041391 3.43207360155385 0.270445854108398 0.276369700114218 0.271018659727949 0.269712811383532 0.26559677391383 0.274390906665961 0.264454388635461 0.269452290275866 0.277436149161144 0.277865249317964 0.267191023532371 0.270756974788143 0.27760582935796 0.279743629079415 0.276495063835937 0.266222518525495 0.270152253091798 0.268656591596851 0.264454388635461 5 5 + 9460478 9460685 9460583.625 9460468 9460719 + gene protein_coding_gene TRUE TRUE AT5G26890.1 unknown protein -0.468203566330143 -4.05242669773468 0.00206335409875323 1 4.87056200989891 7.22248542928168 -0.468203566330143 0.136596322968551 AT5G53580_at 9.68215477169067 9.9252830265933 10.1667689541260 10.1703856617102 10.6900070531630 10.1789463032673 10.5802794784785 10.4401182582315 10.1684335492483 10.4161068243893 10.5619853898937 10.6934862840651 10.6977665108492 10.5669305047846 10.4550367070146 10.9045983770192 10.5535910158958 10.5132713372037 10.3419463170055 0.0848317841245888 0.0788255244933012 0.0800685706071861 0.081052903581266 0.0806704895997134 0.0800538170876229 0.0871792861837675 0.0779014713768538 0.0907461687902781 0.0788935706881382 0.0840055251630776 0.0779014713768538 0.0779014713768538 0.0837192505526822 0.0839410753425573 0.0794973767684503 0.094331960201586 0.0839007263033751 0.0789905634589826 5 5 - 21782530 21783242 21782905 21782280 21784226 - gene protein_coding_gene TRUE TRUE AT5G53580.1 aldo/keto reductase family protein similar to aldo/keto reductase family protein [Arabidopsis thaliana] (TAIR:AT1G06690.1); similar to Aldo/keto reductase [Anabaena variabilis ATCC 29413] (GB:YP_323565.1); similar to hypothetical protein alr0300 [Nostoc sp. PCC 7120] (GB:NP_484344.1); similar to Os10g0517400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065068.1); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) -0.407971243342519 -4.05069365388552 0.00206931183942780 1 4.86803695202851 20.6928240197685 -0.407971243342519 0.100900320764755 AT5G44250_at 7.29352695521256 7.44726016989949 8.51138588470014 8.62290538722432 9.18292457894649 8.81876715715244 7.8139862754552 7.20605386695529 6.72618434663236 7.39235096132495 8.71510114286538 8.74223337377307 8.77454317733224 8.16101428091173 8.74978268306894 8.76593754108976 8.68557198639845 8.4426268730173 7.620678909107 0.178045582974532 0.168807322863118 0.16342252175916 0.165119897167868 0.169091504424704 0.174636728538409 0.170421795468601 0.176932402082197 0.181887294293017 0.168003284713756 0.164517307740339 0.16342252175916 0.167315438569692 0.177000951356042 0.163500434604295 0.165983947910978 0.174405086505239 0.175302455635687 0.166994288248951 5 5|0 -|/ 17841148 17841753 17841489 17840972 17842989 - gene protein_coding_gene TRUE TRUE AT5G44250.1|AT5G44250.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15695.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94687.2); contains InterPro domain Protein of unknown function DUF829, eukaryotic; (InterPro:IPR008547)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15695.1); similar to Protein of unknown function DUF829, eukaryotic [Medicago truncatula] (GB:ABE83368.1); contains InterPro domain Protein of unknown function DUF829, eukaryotic; (InterPro:IPR008547) 0.450475430389092 4.04718920085550 0.00208141418787908 1 4.86292957632257 16.0501043451075 0.450475430389092 0.126963985951052 AT5G67470_at 5.20986643124218 5.9400326602149 6.705286321368 7.20394995581342 5.27571623919433 5.2007883342293 3.6698329492706 3.94253611043459 4.52169011534283 3.84716432272969 6.45050949650118 6.42644110694869 4.43966043901768 5.86028177823275 6.05926735217385 5.94618364921685 4.25906391189785 5.60963378731597 4.00002618676106 0.248648643835929 0.247434297984152 0.247645555246204 0.246090114344071 0.244856443415281 0.25949163856545 0.251314007765559 0.240172196995157 0.239940705337674 0.247893113921647 0.240705439019572 0.244437429323684 0.243513338235505 0.250900564155517 0.249226421490787 0.244299467684075 0.250839708514127 0.240163393245148 0.244177542135941 5 5 + 26946875 26947413 26947208.727 26943939 26947696 + gene protein_coding_gene TRUE TRUE AT5G67470.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to AFH1 (FORMIN HOMOLOGY 1), actin binding [Arabidopsis thaliana] (TAIR:AT3G25500.1); similar to Os03g0204100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049309.1); similar to Actin-binding FH2 [Medicago truncatula] (GB:ABE77423.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) 0.512446356498632 4.04470344863286 0.00209004334118295 1 4.85930574787147 10.2706713244414 0.512446356498632 0.16065116108269 AT5G64650_at 4.36489089705925 4.18067546857087 4.955497188754 5.45035760821094 4.55898982710171 5.40275517209465 4.28142105114397 4.6101199173019 4.79116658836328 4.18111217641786 4.26882113233741 4.3144660963992 4.49788737569384 4.66089437796104 4.4697308254456 4.64678801264442 4.29668125090504 4.79490752676729 4.80288429698972 0.227778336642279 0.228168697877982 0.230908146950916 0.224557724274486 0.222964751744361 0.233390021015466 0.225579376700888 0.234573368786589 0.233963028391532 0.223571056814986 0.222964751744361 0.222964751744361 0.237507388206191 0.223590667019466 0.229899872726571 0.227998955230188 0.230851484244427 0.224372840115959 0.232015253369572 5 5|0 -|/ 25856768 25857976 25857204.3 25856586 25858035 - gene protein_coding_gene TRUE TRUE AT5G64650.1 ribosomal protein L17 family protein similar to ribosomal protein L17 family protein [Arabidopsis thaliana] (TAIR:AT5G09770.1); similar to Ribosomal protein L17 [Medicago truncatula] (GB:ABE93922.1); contains InterPro domain Ribosomal protein L17; (InterPro:IPR000456) -0.553208500463743 -4.04166193106012 0.00210065266478876 1 4.85487045870494 9.26833493895942 -0.553208500463743 0.181402652669775 AT5G08650_at 9.72891605669242 9.86751630541653 10.0697224995129 9.95938313552792 10.3833711931926 10.0184451708541 10.4280054372156 10.4278687050271 10.7164983342984 10.7031158073414 11.3705731861985 11.374289090831 11.1576084618388 11.3125174819239 11.1105917198852 11.5314436636142 10.7006129045223 11.1022154544952 10.6595347382507 0.0793186496013712 0.07113300243575 0.0758119285064354 0.0780394820256899 0.0714453443709276 0.0764712617019029 0.0719226628103526 0.0716440861533399 0.0782056999808827 0.07505162230386 0.07255341272249 0.0713725579856695 0.0751712528063487 0.0778046514657192 0.0733205405475442 0.07113300243575 0.0793071652346928 0.075699362978625 0.0737315747984486 5 5|0 -|/ 2806550 2808511 2807680.333 2806324 2813264 - gene protein_coding_gene TRUE TRUE AT5G08650.1 GTP-binding protein LepA, putative similar to GTP binding / translation elongation factor [Arabidopsis thaliana] (TAIR:AT5G39900.1); similar to GTP-binding protein LepA [Synechococcus elongatus PCC 7942] (GB:YP_399498.1); similar to putative LepA protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28023.1); similar to GTP-binding protein LepA [Synechococcus elongatus PCC 6301] (GB:YP_171750.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Elongation factor G, III and V; (InterPro:IPR009022); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain Elongation factor G, C-terminal; (InterPro:IPR000640); contains InterPro domain GTP-binding protein LepA; (InterPro:IPR006297); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) -0.364644670738455 -4.03717231082322 0.00211641612280040 1 4.84832097754789 21.0606691239518 -0.364644670738455 0.0702004567230658 AT5G44070_at 10.1011477188546 10.0831484305002 10.8887608389893 10.8888693432321 10.7080785582221 10.5094609398532 9.50722534469458 9.4135795665422 10.0939405449357 9.34602056273072 10.6689781209722 10.9567111969363 10.1754304159729 10.6712393058548 10.3717979633978 10.4866048431977 10.3801406736893 11.0107011502760 9.34682768473206 0.0723425707404268 0.0725872274234237 0.0725586200639356 0.0720844695613912 0.0723653497358491 0.0724388298671111 0.0736482057566179 0.076268492755382 0.0789457557723023 0.0744169091378242 0.0742289567804525 0.0730552934872686 0.0719598143184047 0.0751670028465572 0.0769952704979891 0.0728970224721012 0.0830113334847179 0.0715633816872115 0.074311394784406 5 5|0 +|/ 17754055 17754822 17754366.5 17751965 17755086 + gene protein_coding_gene TRUE TRUE AT5G44070.1 CAD1 (CADMIUM SENSITIVE 1) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+. similar to ATPCS2 (PHYTOCHELATIN SYNTHASE 2), glutathione gamma-glutamylcysteinyltransferase [Arabidopsis thaliana] (TAIR:AT1G03980.1); similar to phytochelatin synthase 1 [Brassica juncea] (GB:BAB85602.1); similar to phytochelatin synthase [Brassica napus] (GB:CAK24968.1); similar to phytochelatin synthase [Brassica juncea] (GB:CAC37692.1); contains InterPro domain Phytochelatin synthase; (InterPro:IPR007719) 0.333849286639396 4.03531222477699 0.00212298320109219 1 4.84560660301426 20.355432204071 0.333849286639396 0.0381280216301709 AT5G26610_at 7.76364285997832 7.5343823044365 8.28851948017333 8.16468009969623 8.78208215963274 8.04629271390967 7.51508721511449 7.32202381324878 7.46062457876703 7.86289885062988 8.06863542580002 7.86749970291819 7.68966682190656 7.90295387540409 7.72305037363694 7.8720984002679 7.68447013628374 7.64331893691256 7.62786512388777 0.166426991833043 0.159689180660304 0.157970304622103 0.159536069881431 0.158696759316657 0.154625413386779 0.163422014759129 0.16699880689285 0.171755521062925 0.164237272125878 0.156376604316581 0.154625413386779 0.158439210052130 0.172697027635779 0.161181000462918 0.154625413386779 0.182628830631499 0.169018926288133 0.156528771397704 5 0|5 /|+ 9376307 9376951 9376649 9375186 9377128 + gene protein_coding_gene TRUE TRUE AT5G26610.1|AT5G26610.2 D111/G-patch domain-containing protein similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52350.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33215.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain D111/G-patch; (InterPro:IPR000467) -0.470618114932337 -4.03329090177979 0.00213014366358135 1 4.84265636151957 15.6555511108918 -0.470618114932337 0.139151035212846 AT5G45280_at 7.46642734502904 7.51094870217068 7.30129255499644 7.68524556255012 8.10244244719623 7.13506413523685 9.08017637730306 9.72452555028108 8.78635534554982 9.14930639104104 10.8332950879034 10.7020342236525 10.0950577701116 10.5463827450727 10.1459748528791 9.67513753855124 8.68656785595105 10.1813711372196 8.54883691206427 0.241656685363905 0.230159166633575 0.246420562427339 0.239267531224944 0.233154754758561 0.248754831027539 0.231984180881129 0.229711427476592 0.244444708982183 0.226308214945932 0.234631842002677 0.233987432510293 0.227804413936388 0.230840313014561 0.229532301547099 0.228335157876923 0.259876646181326 0.238080700278857 0.225132644244783 5 5|0 +|/ 18365490 18366663 18366088.667 18362822 18366922 + gene protein_coding_gene TRUE TRUE AT5G45280.1|AT5G45280.2 pectinacetylesterase, putative similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT4G19410.1); similar to pectinacetylesterase precursor [Vigna radiata var. radiata] (GB:CAA67728.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) -0.615008662852401 -4.03061739908393 0.00213965320946208 1 4.83875330084222 17.4689622681634 -0.615008662852401 0.211976685664072 AT5G44290_at 8.1803757860345 8.00548318760925 9.31208261074583 9.27963160434311 9.62758397351868 9.33818401353638 8.28604348394854 8.10700894518837 7.92418540278765 7.91548345822097 9.32745783140906 9.0612302429833 9.13059084281606 9.23212077268852 8.75149738762686 9.2370568455122 9.07833487822494 9.01359226760716 8.12361859574099 0.138260584919505 0.133471124405825 0.133424355837089 0.133075439232305 0.130833581781216 0.135402720414839 0.136893745058238 0.135137006303015 0.138965253237745 0.139102155823297 0.131413419577573 0.133086532574662 0.133349270566521 0.13269387426498 0.129704273887091 0.134849133108040 0.131990865919532 0.134536560832259 0.146972185674667 5 5 - 17858000 17858714 17858379.364 17857651 17860937 - gene protein_coding_gene TRUE TRUE AT5G44290.1|AT5G44290.2|AT5G44290.3|AT5G44290.4 protein kinase family protein|kinase similar to kinase [Arabidopsis thaliana] (TAIR:AT1G03740.2); similar to Os08g0112500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060831.1); similar to putative CRK1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD89473.1); similar to Os01g0201000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042320.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.359545338798985 4.02883340979464 0.00214602344270920 1 4.83614826063556 17.3129230102114 0.359545338798985 0.0664507807483695 AT5G47750_at 6.54096560194421 6.88720419129027 7.06815787671643 7.36500370858437 7.94997721140098 8.01230309018768 6.46955749924569 6.86966333170972 7.04974220861725 6.67071395712754 7.12880341815561 7.06671481674949 7.43226455357516 7.05209969033733 6.90700954758515 7.48871134259313 7.01246371203093 7.27661537494272 6.82228803565277 0.190988376939315 0.179349036174499 0.187112615676551 0.185221744174394 0.175364080051745 0.186169115182919 0.176849769609775 0.173974195381999 0.180596870624846 0.191991091933174 0.181007037800552 0.173974195381999 0.176567013339816 0.180926484824996 0.186563983927782 0.17708304930167 0.196852421852403 0.176100847322539 0.186019691606219 5 5 - 19357244 19357676 19357438.091 19356929 19359587 - gene protein_coding_gene TRUE TRUE AT5G47750.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55910.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G44830.1); similar to protein kinase (GB:AAA33509.1); similar to Protein kinase PVPK-1 (GB:P15792); similar to G11A protein (GB:AAA33905.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.412839928877201 -4.02770626061032 0.00215005845070483 1 4.83450211896956 14.1544374176159 -0.412839928877201 0.105544591082023 AT5G24270_at 1.97815896365948 2.5054367585875 2.03612063428413 1.76772343628348 3.87527861133395 3.75957314044345 1.33979669757252 1.01605378498964 2.1741032775905 2.07796812436327 2.73356551629943 2.73188169116410 1.91281007915968 2.08990095169442 2.32006949201826 1.81562534714251 1.7753042199812 2.14192199140931 1.91896985700199 0.207155863035729 0.206376826770003 0.217113127198208 0.207219755733283 0.232203145007776 0.221798200997062 0.210694249358568 0.205288589927297 0.214210283660631 0.205436580077356 0.21024167177576 0.205425827998044 0.204358366793122 0.218242371620728 0.216185855650038 0.204185544284529 0.219475118786623 0.210137716326455 0.218371902457639 5 0|5 /|- 8238826 8239745 8239243.444 8238784 8240182 - gene protein_coding_gene TRUE TRUE AT5G24270.1 SOS3 (SALT OVERLY SENSITIVE 3) encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. Identical to Calcineurin B-like protein 4 (Protein SALT OVERLY SENSITIVE 3) (CBL4) [Arabidopsis Thaliana] (GB:O81223); similar to CBL8 (CALCINEURIN B-LIKE PROTEIN 5) [Arabidopsis thaliana] (TAIR:AT1G64480.1); similar to calcineurin B-like protein 4-1 [Populus euphratica] (GB:ABJ09703.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 0.433467848457744 4.02527519972495 0.00215878823936112 1 4.83095104820898 4.4083420854412 0.433467848457744 0.118420000038973 AT5G17850_at 4.24402516417509 5.34590369175069 5.65492911594242 6.0293491722931 6.19918622218887 5.98713920713381 2.73359630455414 2.589777848376 2.96371812055618 2.78211939332738 2.81958786286664 3.01366763687560 2.70184730908558 3.28193582392376 2.9683800465331 3.94266907846404 3.29861710681966 3.1506337515779 2.49891365991517 0.293564303338972 0.289745563563142 0.299623472466758 0.293488829604356 0.290734276615837 0.295367761102055 0.287841857748556 0.279812471773369 0.278351068885735 0.28586065858958 0.274673894728173 0.278975920816139 0.279464276826081 0.281551588870385 0.291928402120337 0.276654117993544 0.278965278920552 0.278047473327512 0.273650836297173 5 5 + 5900367 5900878 5900648.182 5899255 5900934 + gene protein_coding_gene TRUE TRUE AT5G17850.1 cation exchanger, putative (CAX8) similar to cation exchanger, putative (CAX7) [Arabidopsis thaliana] (TAIR:AT5G17860.1); similar to Sodium/calcium exchanger membrane re (GB:ABE92415.1); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) 0.60166241439456 4.0226033107581 0.00216842553035641 1 4.82704719771186 7.79569719994403 0.60166241439456 0.206216569640455 AT5G51760_at 2.4103614677389 2.58973156902801 2.41255017479649 2.65189150314790 1.70929013572134 2.41460647661794 2.2767787728245 2.38721335126256 2.75230463093175 2.83084516991833 2.76192729014990 1.97443494769252 2.35614372934147 2.20835845355637 2.89857873158714 2.10028227946064 2.45986171979703 2.67393473566302 2.49590840396933 0.209854775496546 0.20334233184473 0.206674824066179 0.212030707569909 0.2087100515384 0.207137809392615 0.204017189498991 0.203224648959736 0.207540202333385 0.210065227849907 0.204404088537064 0.203224648959736 0.204505972761073 0.205826439027158 0.211852752412896 0.207601073847688 0.208481023119529 0.216689129111165 0.208765034089973 5 5 + 21044878 21046097 21045539.909 21044142 21046414 + gene protein_coding_gene TRUE TRUE AT5G51760.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G29380.1); similar to protein phosphatase 2C [Prunus avium] (GB:AAQ03211.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.459740066012015 -4.02014151381972 0.00217734479828172 1 4.82344938301597 4.91765775014845 -0.459740066012015 0.133949769792602 AT5G18600_at 11.5677418917896 11.8024038661026 11.8538685564371 11.8756381592608 12.0827663243066 11.8351303680046 12.2414431888552 12.3924614773264 12.3246345245273 12.1506837665141 12.6669635650603 12.6135284470883 12.5007387559863 12.5045725650127 12.4502818926498 12.4848144000965 12.3191656292531 12.4915546376822 11.9620274776759 0.074027276324929 0.0698125659573593 0.0735655954726217 0.0718380066610444 0.0698125659573593 0.0816154229011158 0.0698227207172994 0.0704762946354148 0.080864802234256 0.070603097941429 0.071363551865831 0.07038694773423 0.0704160945054842 0.0745046094130713 0.0710735202577728 0.0699399562304389 0.0767405192157824 0.074048805429312 0.0704842500394467 5 5 - 6183470 6183694 6183563.545 6183260 6183956 - gene protein_coding_gene TRUE TRUE AT5G18600.1 glutaredoxin family protein Identical to Monothiol glutaredoxin-S2 (AtGrxS2) (GRXS2) [Arabidopsis Thaliana] (GB:Q8L8Z8); similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G15680.1); similar to Os01g0368900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043047.1); similar to Glutaredoxin-like family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99336.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin-like, plant II; (InterPro:IPR011905) -0.356758337989374 -4.01988323069672 0.00217828279417888 1 4.82307186144941 24.2812989337651 -0.356758337989374 0.0646748247076839 AT5G58550_at 2.21932367296882 2.19679445191163 2.77933393555871 2.35626962581735 2.47689291980452 2.97868161674792 2.56769247195590 2.20035575044026 1.87223962406242 2.02334014379339 3.17272365613305 3.42397736920260 3.17623016028027 2.91497028253535 3.37969558679253 3.32833222642892 3.11909934775658 3.33607797131622 2.36704131682793 0.187204697455538 0.183738582097685 0.184614155455859 0.188989961938038 0.186027189402973 0.188719509113243 0.187932037997702 0.193187902612235 0.185638533600043 0.185448172330539 0.187380990384602 0.188727692000263 0.189818829425192 0.189514722336401 0.185100122277854 0.18833708317221 0.194346437558683 0.183145261715629 0.189520155865201 5 5|0 -|/ 23682693 23683402 23683020.444 23682521 23685700 - gene protein_coding_gene TRUE TRUE AT5G58550.1 EOL2 (ETO1-LIKE 2); binding / protein binding Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL2 also interacts with and inhibits the activity of ACS5. Identical to ETO1-like protein 2 (Ethylene overproducer 1-like protein 2) (EOL2) [Arabidopsis Thaliana] (GB:Q9LV01;GB:Q6PWY1); similar to ETO1 (ETHYLENE OVERPRODUCER 1) [Arabidopsis thaliana] (TAIR:AT3G51770.2); similar to EOL1 (ETO1-LIKE 1), binding [Arabidopsis thaliana] (TAIR:AT4G02680.1); similar to TPR Domain, putative [Medicago truncatula] (GB:ABE91127.1); similar to ethylene overproducer-like 1 [Lycopersicon esculentum] (GB:AAZ08351.1); similar to ETO1-like protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94447.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain BTB; (InterPro:IPR000210) 0.452039325695795 4.01033565975417 0.00221325398630124 1 4.80910973769061 5.13138239895911 0.452039325695795 0.130219367222386 AT5G38890_at 5.30207179510857 5.1770608942144 6.33539917641755 6.43071684330375 5.13727394144494 5.52191427397326 4.52348716143418 4.81318022731238 4.37449682712319 4.18312870524454 4.183129142387 3.94830604121869 4.46216110890877 4.01672604550342 4.60196443890768 4.22799784991789 5.12288069502543 4.70900236939449 4.22166682345266 0.266108545573432 0.265216289569101 0.277543917531726 0.278146657779728 0.273197960367902 0.266014918912511 0.265216289569101 0.268984896492924 0.275934608462044 0.278558847719806 0.274294086652505 0.268482137070484 0.265216289569101 0.267981007393138 0.270082508808721 0.266803996218525 0.284171029378034 0.26909539418443 0.276879333901604 5 5 + 15586738 15588058 15587240.7 15586722 15588325 + gene protein_coding_gene TRUE TRUE AT5G38890.1 exoribonuclease-related similar to exoribonuclease-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22001.1); similar to Os02g0815800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048506.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029) -0.383236329683025 -3.99553176354419 0.00226864150344064 1 4.78743465583942 9.73953057915848 -0.383236329683025 0.0876592237176324 AT5G04820_at 5.2247660494916 5.65003386043129 4.29460595686556 4.70996667711661 6.53374515073287 6.20688102885556 5.59924217411353 5.78852743251369 4.76480071441475 4.10486149048891 6.44355857999552 6.27849690888508 5.81406362542123 6.02835630319778 5.78993939496917 5.26008412549936 4.46738934819189 5.30539985734047 4.6035723248043 0.206258310704309 0.206424861624632 0.217159351118293 0.218577672869081 0.209711184984904 0.232961953947375 0.206778827512297 0.207102799548750 0.225078777821169 0.208203073550095 0.206328071754288 0.210473492715363 0.210559552629824 0.217163986416482 0.204003703679850 0.205826591947283 0.225046476510835 0.216727190621902 0.211106426721075 5 5 + 1399871 1400405 1400122.818 1399620 1400785 + gene protein_coding_gene TRUE TRUE AT5G04820.1 ATOFP13/OFP13 (Arabidopsis thaliana ovate family protein 13) similar to ATOFP18/OFP18 (Arabidopsis thaliana ovate family protein 18) [Arabidopsis thaliana] (TAIR:AT3G52540.1); similar to Os11g0156300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065794.1); similar to Os12g0158300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066202.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33158.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) -0.435975724021142 -3.99473495054467 0.00227166343059656 1 4.78626710305243 10.5832156385185 -0.435975724021142 0.121883359488118 AT5G22310_at 5.74427140433807 5.81138806105036 6.21215022736234 6.10118978404222 6.63896741523901 6.78641014440026 4.3890020575199 4.48088548039626 4.09187882697408 4.32952315184823 6.28133400390507 5.86425194713371 6.3311875841764 6.4183793344553 5.60493895845238 6.40505772925236 6.4795248462096 5.94215120180638 6.1005609850265 0.233151449343334 0.233776109617777 0.23613227375270 0.235737849036506 0.240504553581841 0.240011267426352 0.245752206505781 0.252280629891311 0.266153951645056 0.255378736647588 0.236140617159137 0.238270226257463 0.233151449343334 0.241967688500228 0.246690635506833 0.234253169994132 0.251911772901410 0.235326658558974 0.243567111245297 5 5 - 7383757 7384135 7383975.727 7383632 7385737 - gene protein_coding_gene TRUE TRUE AT5G22310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11590.1); similar to Os04g0382800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052610.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23171.1); similar to OSJNBa0072D21.15 [Oryza sativa (japonica cultivar-group)] (GB:CAD40733.2) 0.329932646272666 3.9930721164595 0.00227798329389075 1 4.78383029262844 11.2737868327720 0.329932646272666 0.037516873106002 AT5G26220_at 8.06432894976996 8.24622508015208 7.85358063437334 7.61372754271844 8.22145562287434 7.65664343614592 6.6163580133766 7.17612588446614 5.37492084748711 5.68884189312489 6.91167158899979 4.7363440907054 6.81986513335085 7.22483244504512 4.35568645928122 5.62065556245759 7.15066133124531 5.97423650443743 4.77881429405878 0.285413831612555 0.277775519267772 0.282426917617628 0.277775519267772 0.281108503160245 0.28755777438304 0.287476955810695 0.279466180794772 0.299550911656609 0.277775519267772 0.277775519267772 0.286948275910157 0.278646798405008 0.277775519267772 0.29224264602184 0.279854850109086 0.286049985608402 0.291098232962896 0.292655695636069 5 0|5 /|- 9163182 9164381 9163647.571 9162972 9164688 - gene protein_coding_gene TRUE TRUE AT5G26220.1 ChaC-like family protein similar to ChaC-like family protein [Arabidopsis thaliana] (TAIR:AT4G31290.1); similar to ChaC-like family protein-like [Solanum tuberosum] (GB:ABB87104.1); similar to meloidogyne-induced (GB:ABA46779.1); contains InterPro domain ChaC-like protein; (InterPro:IPR006840) -0.479624509729089 -3.98579754166107 0.00230584789542588 1 4.77316502839774 13.3711072209832 -0.479624509729089 0.147144156847747 AT5G49890_at 6.47453661276561 6.56710084573028 7.65575231880552 8.07661605531257 8.10009252336034 7.40488613396766 6.84626282678353 6.64136090136607 4.71823863530886 6.01388903294553 7.50036233271346 7.23059818674702 7.07219930864123 7.34861622832003 7.28788871895118 7.70162535315035 7.37256871578933 7.17109715887554 5.69838542016449 0.203034635263947 0.191133472538401 0.195003760811281 0.197243115963928 0.205393097895208 0.193006738472603 0.193447358960574 0.193388438835152 0.229159778901039 0.200399189152215 0.191133472538401 0.191578098287298 0.193624090507555 0.206961567023187 0.197086312866276 0.191822318459133 0.210267541072679 0.197535805421173 0.202616581058629 5 5|0 -|/ 20305737 20306336 20306037.1 20305345 20309576 - gene protein_coding_gene TRUE TRUE AT5G49890.1 CLC-C (chloride channel C); anion channel/ voltage-gated chloride channel member of Anion channel protein family Identical to Chloride channel protein CLC-c (AtCLC-c) (CLC-C) [Arabidopsis Thaliana] (GB:Q96282;GB:O04753;GB:O04837); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:AT5G33280.1); similar to ATCLC-A (CHLORIDE CHANNEL A), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to chloride channel [Oryza sativa (japonica cultivar-group)] (GB:BAB97267.1); similar to chloride channel Stclc1 [Solanum tuberosum] (GB:CAA71369.1); similar to C1C-Nt1 [Nicotiana tabacum] (GB:CAA64829.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) 0.477373257766925 3.98579602981546 0.00230585372322929 1 4.77316281108574 13.6270546255305 0.477373257766925 0.145920195846576 AT5G03850_at 9.91064397899335 10.1164777697040 10.3414195039666 10.3713093722445 10.4303271363569 10.2677406721859 10.0035642128503 10.5375882801915 10.3208520908226 10.3181077954302 10.6672854660225 10.830436997869 10.4476153770303 10.6522076928265 10.9894049132752 10.3298902335961 10.0944255538904 10.3170841681353 10.2239143512084 0.0901687600331254 0.0909350582133557 0.089284494247282 0.0904102370845449 0.0833298774949067 0.096143614465825 0.0833298774949067 0.0855364675922097 0.089679374477419 0.0849588195764016 0.0835050212368391 0.0863567982472249 0.0834186171051286 0.0885038868623215 0.084255213708541 0.0863696925920294 0.0873887836255632 0.0840219022783078 0.0833298774949067 5 5 - 1028562 1028700 1028625.091 1028339 1029120 - gene protein_coding_gene TRUE TRUE AT5G03850.1 40S ribosomal protein S28 (RPS28B) Identical to 40S ribosomal protein S28-1 (RPS28B) [Arabidopsis Thaliana] (GB:Q9SR73); similar to 40S ribosomal protein S28 (RPS28A) [Arabidopsis thaliana] (TAIR:AT3G10090.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10101.1); similar to ribosomal protein S28 [Prunus persica] (GB:CAA10104.1); contains InterPro domain Ribosomal protein S28e; (InterPro:IPR000289) -0.404330622248733 -3.98152296840623 0.00232238690711082 1 4.76689451403934 20.6617181388872 -0.404330622248733 0.103091354223885 AT5G63905_at 4.3306757550049 4.25453998060259 5.37908557747463 5.69475693666815 5.95285112271569 5.29870041152376 3.48902218236151 3.86643049190361 4.54880435756491 4.13109111971978 5.74284379514319 5.49137294732537 5.09968949974456 5.42564848013425 5.33070459051276 5.83965218469669 5.17574588762014 5.16345846423491 4.11515790280183 0.217573872500268 0.213010894443744 0.222815068350879 0.223440778471979 0.226106093417153 0.217795109986921 0.218672594582768 0.218647983897384 0.214915390863218 0.225291874567885 0.214682173715857 0.212540177722792 0.216162103561409 0.214606147582782 0.211566089059350 0.215865188470567 0.217734410397076 0.217962864309838 0.216471984439622 5 5|0 -|/ 25588406 25588702 25588575.857 25588084 25588812 - gene protein_coding_gene TRUE TRUE AT5G63905.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99036.2) 0.470039974185567 3.98023953718069 0.00232737682792104 1 4.76501129305528 9.62008644455118 0.470039974185567 0.142262643647304 AT5G37300_at 7.60672391080693 8.07798499648239 10.0622569359181 10.1456270427657 10.9232547863184 10.1403434920454 10.9488627873720 10.6524681295676 10.1226891890592 10.2228024070230 11.7988449994352 11.6171296266337 11.6100838802387 11.6333213084627 11.1558071484313 11.1617889118355 10.7891916610470 11.4723572628156 9.91855541639185 0.180129714769738 0.152681409911514 0.140235678964348 0.136732682434239 0.135651811586442 0.135866292115587 0.132502462514893 0.135524479814020 0.142069610482979 0.133959411306279 0.137087330315163 0.136681554045277 0.135086226472223 0.135637077262083 0.136510272332679 0.132689225458604 0.145202729330095 0.132758034729046 0.137160869856657 5 5|0 +|/ 14786414 14787237 14786883 14784729 14787479 + gene protein_coding_gene TRUE TRUE AT5G37300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38995.1); similar to Protein of unknown function DUF1298 [Medicago truncatula] (GB:ABE82755.1); contains InterPro domain Protein of unknown function UPF0089; (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298; (InterPro:IPR009721) 0.516071657678715 3.97895128694999 0.00233239673243026 1 4.76312076307673 20.5661058955031 0.516071657678715 0.166873290759224 AT5G15280_at 3.89616508993115 3.78359931227910 4.31585881731447 4.1429885410388 4.63574041798988 3.96105006931081 3.98099413446524 4.13902104837834 3.70695252279181 3.99557302007456 4.50395083339563 4.55151423881427 4.61777792946428 4.49401455745001 4.49740578500749 4.64022838175602 4.59930366544076 4.52848990693496 4.77702391715299 0.212293334078214 0.204252389610494 0.211657354132992 0.204252389610494 0.21206885646482 0.224561006428411 0.211651928373341 0.208783773047141 0.211312105448682 0.207595844752703 0.205318704194523 0.209963486735398 0.207357728056904 0.204252389610494 0.211375040933073 0.205882296180061 0.21392234148509 0.204252389610494 0.214899292211216 5 5 + 4965393 4965927 4965553.818 4962296 4966144 + gene protein_coding_gene TRUE TRUE AT5G15280.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G55840.1); similar to Os03g0168400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049090.1); similar to fertility restorer homologue [Raphanus sativus] (GB:CAD61286.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.439675296904041 -3.9784867667892 0.00233420959011823 1 4.7624390130926 8.46389491998316 -0.439675296904041 0.125119211140812 AT5G53830_at 2.24943127482817 2.61946975757561 3.63265882369514 4.12081182671413 2.16856955077739 2.66571462893424 2.02323047570698 1.71535071889954 2.07240214280082 2.28287081219604 2.25045618543573 3.17926186169503 2.72687518893592 2.57131978693142 3.69179349780310 2.91935359313795 2.48695123903111 3.10967314041838 2.51317541734598 0.230368514361485 0.228733617642685 0.229919564791968 0.228285524939126 0.225480143551596 0.227408013872119 0.239128987576001 0.227303503312771 0.235132894177241 0.225480143551596 0.227174279141641 0.230380720556317 0.233895131016234 0.230341447238294 0.225480143551596 0.225636415731049 0.227399742899481 0.225480143551596 0.226450098346836 5 5 + 21874436 21874943 21874753.364 21874276 21875210 + gene protein_coding_gene TRUE TRUE AT5G53830.1 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT3G15300.1); similar to DNA-binding WRKY; VQ [Medicago truncatula] (GB:ABD32365.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.477330144070041 3.97576132548752 0.00234487567192406 1 4.75843841338163 5.22762630836866 0.477330144070041 0.146552372378102 AT5G01090_at 8.33784615710634 8.5776611956518 8.27812354846885 8.53250898027822 9.23178686899213 9.02109118920579 9.25323116455069 8.91537408414482 8.84081690529791 8.77846756878415 10.0015794486443 10.0808318926781 9.79689383076478 9.52808291266097 9.64611671865426 9.59522889594674 9.35711792062507 9.33583986102331 9.05923803129886 0.138887625856640 0.135178425616985 0.141744832839322 0.140766669677354 0.139046465669920 0.141842400145277 0.145215463084148 0.158454795801721 0.164683890044296 0.135178425616985 0.138516960078667 0.138903202337922 0.135178425616985 0.143006314807929 0.140256388875605 0.138655253997087 0.141923563627729 0.153631879867647 0.138135549607145 5 5 + 33523 34031 33784.727 32831 34325 + gene protein_coding_gene TRUE TRUE AT5G01090.1 legume lectin family protein similar to legume lectin family protein [Arabidopsis thaliana] (TAIR:AT3G09035.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE83853.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220) -0.386338312044717 -3.96925062894551 0.00237056171371377 1 4.74887723643328 18.0487290336757 -0.386338312044717 0.0916966478088162 AT5G55600_at 6.27812594901704 6.65635882861581 8.01206211852212 8.06152981692401 8.6501862666797 7.85101428823503 6.5563093911867 5.83150153661972 5.31949606605691 6.24162852166692 7.74387156254301 7.72343027189542 7.58561505756458 7.60151951193659 7.04341931846965 8.21567754002925 7.55445138297805 7.41347443548213 7.07984252728887 0.225787424191477 0.211953487603586 0.214013019629047 0.219581744766327 0.212431752806139 0.221544260244287 0.222702450161947 0.219979256269049 0.244572306979167 0.226744932818594 0.219268658212875 0.211902348080376 0.211902348080376 0.21725869882211 0.220894322703096 0.215785559688885 0.233564223439974 0.223915888538656 0.219313743585751 5 5|0 -|/ 22539467 22540080 22539742.3 22539075 22542871 - gene protein_coding_gene TRUE TRUE AT5G55600.1 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein similar to agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G68580.2); similar to putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31149.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025) 0.576786916726787 3.96879983559901 0.00237235101367105 1 4.74821500687832 14.1490550695333 0.576786916726787 0.198034538878001 AT5G50870_at 8.96654272210939 9.20412313660671 10.0827817988952 10.2443366261611 10.3368401867467 10.1228664072825 9.46704902221878 9.45436018204233 8.64663792900734 8.69314802859126 9.86749855003354 9.9320471446571 9.89013777951412 9.79981653953265 9.91283396459922 9.87303595066097 9.61774579801113 9.9280696852116 8.59173521296772 0.139374098419491 0.132412417526665 0.132390578832630 0.133565263200675 0.134998523840755 0.131525777106065 0.132469630636967 0.136163621036155 0.180855589478193 0.162365159842620 0.137137234375282 0.130804869300886 0.129949877656589 0.135536243685334 0.133595348727275 0.129949877656589 0.136235723281676 0.13755084565383 0.151014702020863 5 5 - 20716855 20718091 20717530.091 20716664 20718332 - gene protein_coding_gene TRUE TRUE AT5G50870.1 UBC27 (ubiquitin-conjugating enzyme 26); ubiquitin-protein ligase similar to UBC8 (UBIQUITIN CONJUGATING ENZYME 8), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G41700.4); similar to Ubiquitin-conjugating enzyme, E2; UBA-like [Medicago truncatula] (GB:ABE89392.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.349201591300254 3.96673801169242 0.00238055282576959 1 4.7451857531237 18.983106793616 0.349201591300254 0.0620323610539046 AT5G06910_at 5.43920203834109 5.55062032394796 6.98179420324862 7.19451493369482 7.29009673151084 6.54386278611493 6.00353452120518 5.82792593594684 3.87239665884965 4.84174029834397 6.36203154689762 5.92384576467419 6.15069236365156 6.40629317033618 5.91287600149865 6.57931435941508 6.04795194336538 5.14339133225148 4.52802051576342 0.24049962634011 0.233913037559874 0.248907538276412 0.235676888088627 0.240292680622305 0.274868625150548 0.241224107839038 0.236454880939168 0.261071284066172 0.238191415162620 0.23473421602027 0.233976037342779 0.237725108737335 0.236570687543436 0.233124600369430 0.233124600369430 0.260212061178866 0.244204488203862 0.240928596786893 5 5|0 +|/ 2141398 2142430 2141971 2140454 2142680 + gene protein_coding_gene TRUE TRUE AT5G06910.1 ATJ6 (ARABIDOPSIS J-DOMAIN PROTEIN 6); heat shock protein binding / unfolded protein binding DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain. Identical to Chaperone protein dnaJ 6 (AtJ6) (AtDjC6) (ATJ6) [Arabidopsis Thaliana] (GB:Q9FL54;GB:O49070); similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G12170.1); similar to Heat shock protein DnaJ [Medicago truncatula] (GB:ABE93759.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.462363300690272 3.96450513524011 0.00238946843332046 1 4.74190450313803 11.5938699598748 0.462363300690272 0.139023076154020 AT5G03090_at 3.18036402109964 3.12238939769028 3.62404897545299 3.25981814557139 2.77491599836335 3.30927807985265 2.86313419452301 3.1246080011448 3.56754439188086 3.37808094727349 3.28306668144332 3.08266758375227 3.59155645358437 3.65061283452223 3.69946830294587 3.22656806147532 3.88795730268936 3.40843633204096 3.39451837422046 0.179480653943048 0.171566148012806 0.172603147274507 0.172361639060968 0.169653730157649 0.169464685862892 0.167234073208134 0.170118360837636 0.177572269859735 0.173180852499292 0.170557433034687 0.167002651874462 0.172160486838424 0.169461378967530 0.175306550647519 0.167002651874462 0.185632756226683 0.171537488391524 0.169334831768158 5 0|5 /|+ 725710 725927 725845 725280 725961 + gene protein_coding_gene TRUE TRUE AT5G03090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G53480.1) -0.431053213231321 -3.96114996222846 0.00240293075636703 1 4.73697268364858 6.62007273430308 -0.431053213231321 0.121130420102581 AT5G22880_at 6.95535759674149 6.26797298232138 7.67555177228831 6.61415513174978 5.81830195117654 5.20475676657661 7.4958817539978 6.00158873496106 7.25250453230128 7.63274814362035 7.85387386595064 8.451164252958 7.45475870717092 7.8486446412797 8.36670983167373 7.78683170083588 7.68682799219996 7.80258806623822 7.11950642603601 0.197604241514009 0.194782456848374 0.191437607543325 0.192230198780714 0.194024270345580 0.211941780588413 0.201338068097599 0.197083578722872 0.200491978122659 0.193419783745181 0.193853825936087 0.192568711208602 0.193768184250590 0.194480753164226 0.203086218480581 0.191596098392696 0.195869376122284 0.191765089247521 0.198723315184475 5 5 - 7652148 7652544 7652384.545 7651960 7652625 - gene protein_coding_gene TRUE TRUE AT5G22880.1 histone H2B, putative Identical to Histone H2B.10 (HTB2) [Arabidopsis Thaliana] (GB:Q9FFC0;GB:Q96516); similar to histone H2B, putative [Arabidopsis thaliana] (TAIR:AT3G46030.1); similar to Histone H2B (GB:O22582); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124); contains InterPro domain Histone H2B; (InterPro:IPR000558) -0.919121524710514 -3.9574425442151 0.00241789844350997 1 4.731521231611 14.1248681276971 -0.919121524710514 0.355011414888442 AT5G15790_at 3.6365534191862 3.7421313503563 4.45558536283177 4.44335708626456 4.45877168318654 4.05086537386919 4.0258103822028 4.60546587622672 4.0057768146095 4.39045704008337 4.32406465202723 4.57850858253576 4.30410687739918 5.13692103890825 4.34911505250630 4.48428494542101 3.94490312176886 4.69026511604743 3.92814399230979 0.220377470676732 0.220913875256926 0.223541560705048 0.219880508836822 0.225159813655948 0.226730700640830 0.228274076717776 0.220906692702397 0.229459259705450 0.219349658331193 0.221718953889904 0.225689036699890 0.219221521648952 0.232265697174768 0.226014011122234 0.215558861039386 0.222171262621693 0.220413301385590 0.220937361190249 5 5 + 5150029 5150943 5150277.455 5148747 5151436 + gene protein_coding_gene TRUE TRUE AT5G15790.1|AT5G15790.2 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G02290.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96851.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.435353370926923 -3.95600890320166 0.00242371240985975 1 4.7294126574341 8.46964112792933 -0.435353370926923 0.124031342762167 AT5G59760_at 0.648935837169101 0.563148097912387 1.18530253231554 1.13289558258396 1.65151942674785 1.59391300603893 1.01062464501976 0.892495629926963 1.39919280959746 1.18540075905614 1.29970733142876 0.802871876451883 1.12784782728725 1.07542765533501 0.437673915049467 1.09933204064366 1.34583486140815 1.99522967549053 0.346021335207556 0.247576721116552 0.242443367081783 0.242443367081783 0.245623038232185 0.246605382126529 0.247884397286782 0.242443367081783 0.246745553388991 0.260118537573593 0.249975521820611 0.242443367081783 0.245379758125462 0.243386334616295 0.242443367081783 0.24600829495651 0.245198515844379 0.247456296441625 0.247017329577851 0.244463080731466 5 5 - 24092931 24093374 24093136.364 24092854 24093641 - gene protein_coding_gene TRUE TRUE AT5G59760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G28690.1); similar to Os05g0115100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054464.1); similar to 4D11_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67518.1); contains InterPro domain Protein of unknown function DUF1635; (InterPro:IPR012862) 0.32135538329875 3.95412171858317 0.00243138789864953 1 4.72663657468706 2.14728548596792 0.32135538329875 0.0286346584759548 AT5G53030_at 4.17502499116748 4.19117701941625 5.77490318928037 6.8988151022966 6.18234169578531 5.84478183525857 4.41999021621554 4.47466019351506 3.95716337516288 3.64288374116269 4.03008609809037 4.31630692252917 4.86652055964622 5.18047277861598 3.82010302586172 4.90783051244964 5.38480023229861 4.63729179188231 3.12978593268209 0.30043172394977 0.290557324335687 0.321038991364034 0.30137997002914 0.30112307641453 0.304633040774535 0.291382362909963 0.28743488028999 0.295567806961535 0.294207134984121 0.288380933374348 0.286619844735094 0.295414402545257 0.295122279793472 0.289315343689174 0.288411064654499 0.299705551282923 0.301316126721801 0.296918105356283 5 5 + 21522701 21523139 21522893.364 21522300 21523846 + gene protein_coding_gene TRUE TRUE AT5G53030.1|AT5G53030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27810.1) 0.585166501913994 3.95211642037368 0.00243957154881455 1 4.72368619152284 9.35498053362072 0.585166501913994 0.203320770620734 AT5G02670_at 2.52270253457168 2.57672529650141 2.97904867205398 3.02188039139983 3.68141783272388 3.00755039044716 2.61615816199935 2.56782085903554 2.42681746345130 2.36739866194479 3.54364335276425 4.09929041580989 3.61961962207197 3.93914324955818 3.4754729749393 3.93644454085259 3.02984576597418 3.38954980526074 2.80180550193530 0.241554500364546 0.23431846568367 0.240519032620283 0.235811405075293 0.230883576984319 0.244210508945664 0.230735257431886 0.236412068858648 0.238305628354684 0.230416492198547 0.238016900418277 0.247111740774995 0.230416492198547 0.248063146785105 0.236895230055936 0.244433057673539 0.248539276213422 0.230416492198547 0.232823663277531 5 5|0 -|/ 603545 603930 603815.444 602720 604604 - gene protein_coding_gene TRUE TRUE AT5G02670.1 similar to polynucleotide adenylyltransferase [Arabidopsis thaliana] (TAIR:AT3G06560.1); contains domain POLY(A) POLYMERASE (PTHR10682); contains domain gb def: Hypothetical protein T22P11_260 (PTHR10682:SF1) 0.423636859934796 3.94762894336935 0.00245798920016736 1 4.71708173175292 5.95222972984878 0.423636859934796 0.117522700106467 AT5G09930_at 1.99883013951302 1.74463947548343 2.52535455418852 1.81168811293515 1.92652865051743 2.10489843859838 2.86207576468477 3.05874489134138 2.06497052339822 2.59622220403082 2.23862203181092 1.58515664919531 2.09716507937208 2.01968810633499 1.85919602591073 2.27664755573722 2.42423423416587 2.31996416793721 2.16447511820460 0.203151315668446 0.201482507503951 0.208231168977849 0.201890859048587 0.207631175437267 0.202194300364681 0.215811125560561 0.215929233000876 0.204901583318423 0.202566969218738 0.201948455605196 0.202667597520480 0.206714510841576 0.208465465998208 0.201482507503951 0.203416571573635 0.207681498270792 0.210189842488904 0.205340546675862 5 0|5 /|- 3097947 3098430 3098202.625 3097644 3100242 - gene protein_coding_gene TRUE TRUE AT5G09930.1 ATGCN2 (Arabidopsis thaliana general control non-repressible 2) member of GCN subfamily similar to ATGCN5 (Arabidopsis thaliana general control non-repressible 5) [Arabidopsis thaliana] (TAIR:AT5G64840.1); similar to 80C09_14 [Brassica rapa subsp. pekinensis] (GB:AAZ41825.1); similar to Os11g0603200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068237.1); similar to ABCF-type protein [Zea mays] (GB:AAT51734.1); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.460082816537355 -3.94649616934227 0.00246266124020207 1 4.71541411772066 4.44299842666739 -0.460082816537355 0.138921749106307 AT5G42000_at 7.01874394321232 7.24483755058883 8.24116114331559 8.4781108722875 9.14502963928643 8.70151355743089 7.74315163002385 7.87052329743022 7.02112109361114 6.31675973347684 8.4522520349165 8.28610928390516 8.50159115532223 8.25222718619184 8.04968726350084 7.79999205612788 7.96537383279605 8.16871470969082 6.66384806534427 0.188110020751527 0.18627833334691 0.192938030669908 0.188045436061689 0.187669479693615 0.191008894022222 0.180856460925915 0.186394997820827 0.20864342202806 0.209256820721953 0.184584661703896 0.185100322964481 0.180856460925915 0.189245125580631 0.180856460925915 0.183822213745670 0.188019689566606 0.187296276601887 0.216845659046111 5 5|0 +|/ 16816685 16817855 16817253.333 16816582 16818256 + gene protein_coding_gene TRUE TRUE AT5G42000.1 ORMDL family protein similar to ORMDL family protein [Arabidopsis thaliana] (TAIR:AT1G01230.1); similar to Os02g0673600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047715.1); similar to unknown [Narcissus pseudonarcissus] (GB:AAL69388.1); similar to OSIGBa0103M18.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66850.1); contains InterPro domain ORMDL; (InterPro:IPR007203) 0.392135701929302 3.93711986616994 0.00250169027152667 1 4.70160384101242 15.4812521564222 0.392135701929302 0.0979241019819603 AT5G06340_at 9.51123143623492 9.58484907195617 10.0957111600191 9.86158351298923 10.3892640295218 10.1166048472865 9.6854597460831 9.67097494636851 10.0741492648478 9.79562532528324 10.1882161285323 10.0407034418612 10.0131081807085 10.0313936930022 10.1525499797045 10.1125236383234 9.85152562715464 10.3102572649066 9.95983010413463 0.098812923637467 0.0964345937129103 0.0941985750204053 0.0963702128125818 0.0932831789707031 0.0982347476868623 0.0951488327973458 0.0960310277857072 0.107057382952295 0.0990652402632016 0.0967127271663235 0.0935473100075425 0.0980040914832202 0.100279302446091 0.0985379908358274 0.0932831789707031 0.0997454502080684 0.0996928808711419 0.0969657743340974 5 5|0 +|/ 1936559 1937681 1936877.2 1936367 1938115 + gene protein_coding_gene TRUE TRUE AT5G06340.1 diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G10620.1); similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase [Lupinus angustifolius] (GB:AAC49902.1); similar to Chain A, Solution Structure Of The Nudix Enzyme Diadenosine Tetraphosphate Hydrolase From Lupinus Angustifolius L. (GB:1F3Y); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086) -0.348020843027736 -3.93526327759476 0.00250949451356879 1 4.69886782072925 19.8798279983221 -0.348020843027736 0.0635344339552796 AT5G35560_at 8.86925121484407 8.71162900171465 9.8699987462626 9.82882934981214 10.2014948819179 9.8652477381895 8.84374978864695 8.49523808714902 8.06375843612552 7.96559605782865 9.1510829983199 9.11426027647852 9.48383171366462 9.43130482100565 8.368022247867 9.3824503857767 9.10290926493927 9.16248252755768 8.11044483472269 0.145131207650782 0.142416786058348 0.147965709936913 0.145600559786565 0.144291993376062 0.144210848369592 0.143061696987715 0.147122265172764 0.159790359046018 0.151218510267375 0.144168103171582 0.143237230606639 0.145349370712235 0.150924700618797 0.155060725268722 0.142416786058348 0.144934969994659 0.142416786058348 0.152179987320706 5 5|0 -|/ 13759701 13760890 13760144.25 13759339 13765542 - gene protein_coding_gene TRUE TRUE AT5G35560.1 DENN (AEX-3) domain-containing protein similar to DENN (AEX-3) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G20320.1); similar to DENN domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93951.1); similar to Os03g0145500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048949.1); similar to Os02g0777100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048289.1); contains InterPro domain DENN; (InterPro:IPR001194); contains InterPro domain dDENN; (InterPro:IPR005112); contains InterPro domain uDENN; (InterPro:IPR005113) 0.378413230782328 3.93441958506388 0.00251304938776033 1 4.69762432673482 17.9337512539055 0.378413230782328 0.0884209809919398 AT5G56520_at 3.70854217915188 3.5965172675033 5.1724902400531 4.9784373504687 6.16670158356318 5.45094445712681 4.12054100198977 3.9355928912403 3.58149555080437 3.65104249715873 4.21620663619218 4.1207864750151 4.74131247903705 4.76183132355079 4.788820384356 4.96931017355925 4.86081154394755 4.51899221217587 3.78408185622015 0.245947031670035 0.235514181003759 0.242262740036156 0.237078020822562 0.244858354482267 0.245411918365683 0.240861350346797 0.238123412884277 0.237704664986943 0.240430789625061 0.235523064379898 0.235186590087585 0.239003533424769 0.238420081781846 0.237892814435876 0.236490955510573 0.234297838603045 0.235120542652717 0.236336227246067 5 5 + 22902462 22902702 22902574.727 22902397 22903141 + gene protein_coding_gene TRUE TRUE AT5G56520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55365.1); similar to hypothetical protein MtrDRAFT_AC152752g20v1 [Medicago truncatula] (GB:ABE87470.1) 0.449418968612838 3.93398675518214 0.002514875140147 1 4.6969863525461 8.78845364049061 0.449418968612838 0.133680686710363 AT5G04920_at 8.71528232530251 8.91808161210442 8.95959775714579 9.19268531347046 9.4009381043619 9.13415459600723 8.63746851412895 8.6846344721317 8.44803983689504 8.01819953240296 8.7650354229158 8.7514986793953 8.63143481320997 8.87921974045787 8.4510297325427 8.83700308464522 8.3337447897249 8.88830225432507 8.157761499294 0.146119531771327 0.142139219392497 0.146498628762474 0.151576264322621 0.142072941009746 0.143099812480512 0.142072941009746 0.145931554391353 0.155772297704311 0.146026007418372 0.144748348019487 0.142072941009746 0.147606061726473 0.144640972673998 0.146763130665116 0.142072941009746 0.162496428272316 0.145165503910529 0.144859710136650 5 5|0 -|/ 1439329 1440505 1439833.375 1438960 1441984 - gene protein_coding_gene TRUE TRUE AT5G04920.1 vacuolar protein sorting 36 family protein / VPS36 family protein similar to Os01g0813500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044600.1); similar to PREDICTED: similar to Vacuolar protein sorting protein 36 (ELL-associated protein of 45 kDa) [Rattus norve (GB:XP_214382.2); contains InterPro domain Vacuolar protein sorting 36; (InterPro:IPR007261) -0.356045662898607 -3.93025988831137 0.00253065302043668 1 4.69149201115406 17.405434763923 -0.356045662898607 0.0711116606010196 AT5G50860_at 7.13571658641123 7.59176900714368 7.84875476675962 7.84304772407286 8.54262593802925 8.05789745076925 7.89375025834885 7.85199955771694 7.43566773075937 7.29391442367162 7.82239673193287 8.24392924918018 7.93337942224696 7.85105716623215 7.84392348551466 7.92480873330152 7.30425659870982 7.86098858729484 6.93901049562249 0.178410738443826 0.168333966712575 0.175455612208459 0.175940507721134 0.178802353382464 0.183043686519221 0.17533724458551 0.175398932998311 0.178681447581688 0.178248685780007 0.175661852885222 0.174361773631734 0.168956634341309 0.184894851926037 0.188957988118539 0.174273930392926 0.19567139899391 0.179382065231164 0.180879526473024 5 5 - 20711039 20712100 20711543.182 20710689 20714265 - gene protein_coding_gene TRUE TRUE AT5G50860.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54610.1); similar to Os01g0367700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043043.1); similar to Protein kinase [Medicago truncatula] (GB:ABE89394.1); similar to putative CRK1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD89473.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.41830752085573 -3.92990455462167 0.00253216271978078 1 4.69096805812977 15.3811735178995 -0.41830752085573 0.115405691721763 AT5G62900_at 6.28228463931623 6.2533695457007 6.46224477884726 6.37284408656174 6.70036438365489 7.07616419751472 3.29649189127216 3.52595159325706 4.24659268606502 3.76316674246015 4.74283878792173 4.7086003081838 4.7419586231429 4.59957696147456 4.80541289347919 4.85525644802743 4.92908886373524 4.51409757417733 3.85658893683371 0.294576133828921 0.290029916706861 0.294969317473886 0.291076180939136 0.307506587015161 0.291737702702453 0.284131511832852 0.289816026131743 0.293808065080707 0.290280462879953 0.281009743909720 0.281009743909720 0.288711559454663 0.287842624014615 0.281009743909720 0.281009743909720 0.285663575795733 0.284828062504263 0.281009743909720 5 5|0 +|/ 25266130 25266915 25266473.9 25266023 25267150 + gene protein_coding_gene TRUE TRUE AT5G62900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G50090.1); similar to Os09g0381600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063061.1); similar to T10O24.15, related [Lycopersicon esculentum] (GB:AAX95759.1) 0.363917948789128 3.92652435808664 0.00254657110317373 1 4.68598294688455 10.0924910208343 0.363917948789128 0.077914164602454 AT5G20730_at 8.2699594135873 8.34583509924293 9.24346332695722 9.27964418760645 9.15204710002264 9.0472587662821 7.26024931566859 7.49874461145655 7.70709604755203 7.43904193441897 8.77137068313053 8.81982911145626 8.791575715467 8.52871017634017 8.59681056940634 8.71790571535897 8.4260626018106 8.68230388502593 7.68096601201785 0.145051619349951 0.143951629249841 0.144329623500264 0.145037834301566 0.139489322340955 0.145378300403837 0.144364140099431 0.143779874151868 0.149030108718538 0.149173536430508 0.149178106216688 0.142194791579907 0.139489322340955 0.144484300866565 0.144047253843421 0.141024467386202 0.161233160058457 0.145262080956161 0.142605458248582 5 5 - 7016706 7017344 7017035.545 7016447 7022115 - gene protein_coding_gene TRUE TRUE AT5G20730.1|AT5G20730.2|AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); transcription factor Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.|Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. Identical to Auxin response factor 7 (Non-phototropic hypocotyl 4) (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) (ARF7) [Arabidopsis Thaliana] (GB:P93022;GB:O24411;GB:P93023;GB:Q8RXZ7;GB:Q9LCZ5;GB:Q9SBK4;GB:Q9SYQ6); similar to ARF19 (AUXIN RESPONSE FACTOR 11), transcription factor [Arabidopsis thaliana] (TAIR:AT1G19220.1); similar to Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation [Medicago truncatula] (GB:ABE90964.1); similar to auxin response factor 1 [Cucumis sativus] (GB:BAD19061.1); similar to putative auxin response factor 7a [Oryza sativa (japonica cultivar-group)] (GB:BAD10267.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525) 0.33182694914028 3.92611095945251 0.00254833910398991 1 4.68537315730446 16.6500780885592 0.33182694914028 0.0473698303179122 AT5G51080_at 1.28753480563023 1.59240767727539 2.03536490066322 2.24464784178636 2.90383948805893 2.20840868481951 1.71609729784319 1.94809587327915 1.17255999787051 1.13051533139638 2.10578087929657 1.67005944861471 1.65520803293589 1.7566664168485 1.69669050866070 1.98253593908815 1.95305867295357 1.98879942450564 1.77101896125384 0.219236874975924 0.209850222626128 0.217794440231583 0.215927237523249 0.215740067945267 0.213929064591134 0.206915760644647 0.206915760644647 0.233159169481838 0.211342606719953 0.210847304499689 0.208249026646943 0.213721769502241 0.213706409744422 0.211111575929292 0.213991830608684 0.213830972403359 0.209551241738831 0.208708464246892 5 5|0 -|/ 20786393 20787437 20787038.222 20786030 20788258 - gene protein_coding_gene TRUE TRUE AT5G51080.1|AT5G51080.2|AT5G51080.3 RNase H domain-containing protein|nuclease similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to putative RNase H domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD03047.1); contains InterPro domain Ribosomal protein L9 N-terminal-like; (InterPro:IPR009027); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337)|similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G24090.1); similar to Os08g0177800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061125.1); similar to putative RNase H domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD03047.1); contains InterPro domain Ribosomal protein L9 N-terminal-like; (InterPro:IPR009027); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.46280325715652 3.921509306045 0.00256810576778155 1 4.6785838122495 3.59661524393777 0.46280325715652 0.142094019836098 AT5G27450_at 3.28175803316904 2.89164934840311 3.23163485437714 3.64564272395348 3.27376947599507 3.87455685535421 2.75530413406516 2.99183563806684 3.21905402524949 3.49784243623751 4.84256520147314 6.14125820125881 5.02010520492012 4.5583027715759 5.80424883912675 4.9638213376848 4.75249403483594 4.37305684003747 3.19069276966447 0.280079973026404 0.282370406173202 0.274321050813131 0.277985417768508 0.273996677717199 0.276740898125571 0.278788753847803 0.273996677717199 0.274913106533458 0.273996677717199 0.277762148470712 0.281900163308491 0.273996677717199 0.279702196266424 0.281476094390963 0.280926549259983 0.279160340105603 0.273996677717199 0.274399789452030 5 5|0 +|/ 9692382 9692915 9692600.6 9690610 9693231 + gene protein_coding_gene TRUE TRUE AT5G27450.1|AT5G27450.2 MK/MVK; mevalonate kinase Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway. Identical to Mevalonate kinase (EC 2.7.1.36) (MK) [Arabidopsis Thaliana] (GB:P46086;GB:Q9STB1); similar to mevalonate kinase [Hevea brasiliensis] (GB:AAL18925.1); contains InterPro domain GHMP kinase, C terminal; (InterPro:IPR013750); contains InterPro domain Mevalonate kinase; (InterPro:IPR006205); contains InterPro domain GHMP kinase, ATP-binding region; (InterPro:IPR006203); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase; (InterPro:IPR006204); contains InterPro domain Mevalonate kinase/phosphomevalonate kinase; (InterPro:IPR012197) 0.474808324631526 3.91903620444367 0.00257879504006406 1 4.67493374371116 7.42302453171364 0.474808324631526 0.148915517070938 AT5G27350_at 9.48409994928652 9.83393840081255 10.8576285435639 10.9933029585878 11.4747608855550 11.1729867698259 10.7674983379583 10.7257938973675 9.8902726432097 10.3131624044310 11.1505004983640 10.6387181334593 11.4621557022875 11.2703691420317 10.4965040177651 11.1745763597488 11.5634646810609 11.1337457897709 10.0090097313371 0.0932217735694534 0.0886093468306621 0.0858545483244417 0.0916191044659534 0.0848780153393899 0.0853792611045718 0.0853000657171289 0.0873342949755201 0.103126083953984 0.0874845215532963 0.092517847266707 0.0859240381531677 0.0832273996307355 0.0918548615058695 0.09627598960143 0.0846510366714868 0.0879009097760834 0.0850615307191887 0.0842837150439705 5 5|0 +|/ 9652092 9654135 9653305.778 9648670 9654429 + gene protein_coding_gene TRUE TRUE AT5G27350.1 SFP1; carbohydrate transporter/ sugar porter Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides. Identical to Sugar transporter ERD6-like 17 (Sugar-porter family protein 1) (SFP1) [Arabidopsis Thaliana] (GB:Q94CI7;GB:Q94EJ0); similar to SFP2 (SFP2), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G27360.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G05160.1); similar to carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G05165.3); similar to Os03g0363600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050166.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.370207764453367 3.91546480555588 0.00259431324435484 1 4.66966118897628 21.2547858263132 0.370207764453367 0.0836413429626048 AT5G08290_at 11.2953428376397 11.3743250268310 12.1812140246935 12.1880253233774 12.1987680336532 12.0115086649156 11.4830274044687 11.4683249912894 11.0997295737330 11.2110831750878 12.1582762945902 12.0509614546948 12.1401037599971 11.9805783612311 12.1121556202432 12.1299740977927 12.1771914412772 12.1458877551763 11.1692741323284 0.06434935011717 0.0620979737526123 0.0642784842862598 0.0634163489544548 0.0646410914440742 0.0664206305239093 0.0622597783086089 0.0625325192945824 0.0680847705900823 0.0657291755659918 0.0623657297763981 0.0625515374097503 0.0635855759510176 0.064691496643419 0.0635061784002321 0.0620979737526123 0.0646357073177195 0.0657650040512743 0.0646982892014183 5 5 + 2666080 2666898 2666594.545 2665977 2667156 + gene protein_coding_gene TRUE TRUE AT5G08290.1 YLS8 (yellow-leaf-specific gene 8); catalytic Encodes Dim1 homolog. similar to catalytic [Arabidopsis thaliana] (TAIR:AT3G24730.1); similar to Os10g0486600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064903.1); similar to Thioredoxin domain 2 [Medicago truncatula] (GB:ABE80406.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain mRNA splicing factor, thioredoxin-like U5 snRNP; (InterPro:IPR004123) 0.321930500972337 3.91389264807729 0.00260117528151506 1 4.66733960791863 23.4110270676127 0.321930500972337 0.0352822820384803 AT5G57940_at 8.30526979554627 8.38157173531398 8.76560606034246 8.82972955846754 9.31637402812716 9.12463265038278 8.17099638524204 8.31759973747228 8.79075234267557 8.7724200613492 9.14893168813537 9.01737691933394 9.01939836358734 9.18270380925925 8.87666962156186 9.27216858568688 8.99682029901517 8.95076427260002 8.91979497421764 0.113063250205446 0.108468076362953 0.119854666356355 0.11199263824864 0.119680785057845 0.120587200034056 0.120305364045313 0.111826882467859 0.118027766964150 0.119077764337142 0.110357926144718 0.112875856340948 0.112763338447317 0.114029446200533 0.111784925393654 0.107886926607988 0.121922733177505 0.114748283192316 0.119577424021317 5 5 + 23477130 23477638 23477379.364 23473791 23477839 + gene protein_coding_gene TRUE TRUE AT5G57940.1|AT5G57940.2|AT5G57940.3 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel member of Cyclic nucleotide gated channel family Identical to Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5) (Cyclic nucleotide- and calmodulin-regulated ion channel 5) (CNGC5) [Arabidopsis Thaliana] (GB:Q8RWS9;GB:Q9XFS3); similar to ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G30560.1); similar to ATCNGC6 (CYCLIC NUCLEOTIDE GATED CHANNEL 6), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G23980.1); similar to ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT1G19780.1); similar to Cyclic nucleotide-gated ion channel 9, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97880.1); similar to cation channel family protein, putative [Medicago truncatula] (GB:ABE88729.1); similar to Putative cyclic nucleotide-gated ion channel 8 (Cyclic nucleotide- and calmodulin-regulated ion channel 8) (GB:Q9FXH6); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.328885663565303 -3.91224888798177 0.00260837006288132 1 4.66491192571092 17.5943524876843 -0.328885663565303 0.0451905035959627 AT5G52650_at 10.2376285759730 10.3619613199009 10.3835288781949 10.5480282681947 10.355405033029 10.1827544846452 10.2110270913000 10.3160602053402 9.89660740790756 9.97165711412692 10.5874142128041 10.9606968075663 10.3748039078649 10.3357824808314 10.7488165706997 10.1616650498433 10.0627875546346 10.3101851461517 9.85349493790916 0.101699026912723 0.100659080226746 0.103838520310899 0.105714192051185 0.0997055991365685 0.111463165368076 0.101840325624945 0.100471600802692 0.120460460637669 0.0986241907812078 0.104310419651198 0.102057653038697 0.0995727452123367 0.103087275543804 0.108550804738787 0.0998247702803731 0.11185028877019 0.110088974038838 0.102160885474606 5 5|0 -|/ 21373007 21373787 21373444.444 21372781 21374331 - gene protein_coding_gene TRUE TRUE AT5G52650.1 40S ribosomal protein S10 (RPS10C) Identical to 40S ribosomal protein S10-3 (RPS10C) [Arabidopsis Thaliana] (GB:Q9LTF2;GB:Q8VZ66); similar to 40S ribosomal protein S10 (RPS10A) [Arabidopsis thaliana] (TAIR:AT4G25740.1); similar to 40S ribosomal protein S10-like [Solanum tuberosum] (GB:ABB55398.1); similar to 40S ribosomal protein S10-like [Solanum tuberosum] (GB:ABB55361.1); contains InterPro domain Plectin/S10, N-terminal; (InterPro:IPR005326) -0.332770020960168 -3.91122083494487 0.00261288041061096 1 4.66339339573111 20.4995602918793 -0.332770020960168 0.0499642253629371 AT5G05710_at 7.1910936178163 7.28874061615991 7.70325854205672 7.8758607601353 8.18079469182095 8.1895567265796 6.83361823270379 7.3102720557294 7.38530812719853 7.12498341478817 7.9959161080434 7.74436082902469 7.49294877677247 7.72931821907122 7.39939826631997 7.76872218599957 7.46063373871828 7.69041092381606 7.3529187004529 0.204339068066812 0.198549359649509 0.198589019604555 0.204034484666586 0.198452155661068 0.205077004077546 0.213040398554909 0.196214698070778 0.202907703378518 0.198555162364478 0.196024692129828 0.192738477569374 0.199076271239221 0.204129661367929 0.195146499533955 0.192473783106677 0.208014144732822 0.201573402496023 0.192473783106677 5 5 + 1715955 1716322 1716135 1715876 1716496 + gene protein_coding_gene TRUE TRUE AT5G05710.1 pleckstrin homology (PH) domain-containing protein similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to pleckstrin homology (PH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB63699.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) -0.377180648770485 -3.90837708717763 0.00262539906299853 1 4.6591921534055 15.0456245946005 -0.377180648770485 0.0893542250859935 AT5G02770_at 8.33206334422811 7.5580941769091 9.34402494054907 8.9878628918211 9.7913864169072 9.03652145878 8.65302917392718 7.54990643458654 6.51711130232704 5.86188954825917 8.34128651719648 8.16938127313192 8.76224811958103 8.3779772318989 8.02433291359495 8.5829497130894 8.85363632397755 7.7181460626533 6.60886403441462 0.178803065248434 0.183116319391581 0.182956013183778 0.178893345703762 0.178901934658940 0.178794838458272 0.179122839275873 0.191032444136539 0.222616612363888 0.198524576652681 0.176833132335706 0.176611109403747 0.178857367206538 0.177977013163200 0.181772429915724 0.17929864648198 0.176611109403747 0.195636979132717 0.200324923556100 5 5|0 -|/ 628099 629097 628705 627032 629253 - gene protein_coding_gene TRUE TRUE AT5G02770.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95330.1); similar to Os03g0283300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049753.1); contains domain FAMILY NOT NAMED (PTHR21594); contains domain gb def: Hypothetical protein Y53G8AR.6 (PTHR21594:SF7) 0.728480550256476 3.90836340157068 0.00262545946012185 1 4.65917193211666 15.9981276369089 0.728480550256476 0.274311051961762 AT5G52580_at 4.78680400185989 5.29889542411444 5.9926513891132 6.27661372410211 6.52300128468848 6.50034016356653 5.10358616742562 5.38784475626486 4.41384279553409 3.83153448436741 5.63954899186204 5.85539195338955 6.12616478152541 5.82945857371921 5.3403696148179 5.8409632838098 5.10093713052501 5.26893570013578 3.92506406910439 0.269125187059791 0.258024787491877 0.270499236204199 0.275467849278788 0.257812356327801 0.269691571873152 0.266359606169649 0.262508682396322 0.270975142186452 0.270998992122168 0.264478503514707 0.264315117354254 0.258921594007055 0.269772550137094 0.261352190176142 0.259000435267181 0.284482321217128 0.269707747528906 0.266692249298507 5 5|0 +|/ 21356554 21357172 21356883.1 21355278 21357204 + gene protein_coding_gene TRUE TRUE AT5G52580.1 similar to Os02g0709800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047892.1); similar to RabGAP/TBC domain-containing protein [Dictyostelium discoideum AX4] (GB:XP_636536.1) 0.411625089858229 3.90741720782753 0.00262963869896381 1 4.65777381244332 10.5747346322544 0.411625089858229 0.112710105863125 AT5G20130_at 6.14780647845963 6.49915190456014 6.80677275487884 6.82226008726806 7.759525408945 7.2187524102795 7.21660801708341 6.73568829798002 6.47766311035498 6.52645406929244 7.26402510345275 7.40653208005457 7.19501284837346 7.3301390056079 7.33666404937242 7.29187587346425 7.02804362023714 6.9071658353161 6.67365407344559 0.173524509745183 0.157108330389485 0.173112890227309 0.166275765496893 0.172624478255363 0.171399269787516 0.169384605245338 0.164019346671448 0.173579496903051 0.161519427087424 0.157108330389485 0.15956048749248 0.159293246792599 0.161188323662935 0.163880204964724 0.161422914171673 0.160070410785344 0.161586855429221 0.170338526091044 5 5|0 +|/ 6797501 6798565 6798100.5 6797442 6798901 + gene protein_coding_gene TRUE TRUE AT5G20130.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD46213.1); similar to Os09g0568100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063968.1) -0.456068376208657 -3.90722183231662 0.00263050251477975 1 4.65748510525802 13.7904153631064 -0.456068376208657 0.139242096569046 AT5G24460_at 10.0373818094723 10.3170449311491 10.6412438629543 10.8670203035043 10.6712364818617 10.6596958922375 9.41969971456883 9.73595165409556 8.64354966072198 8.21537629439276 9.38289626313334 9.27317476138367 9.85862982858092 9.91592758024613 9.10775301651954 9.7195222089307 10.0384858567607 9.66351191237133 8.07368972183508 0.163436257277596 0.167189995283056 0.16688811119388 0.167360007359492 0.169066121835758 0.167669692657419 0.165932339386330 0.162540788174307 0.165368849880763 0.186423130339524 0.17097435566719 0.168255955451350 0.167340931649965 0.165604866443195 0.164533640548649 0.164434747012991 0.167356019781965 0.169097488133271 0.172476097460429 5 5 + 8355132 8355692 8355412 8354702 8355877 + gene protein_coding_gene TRUE TRUE AT5G24460.1 similar to Os06g0712200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058555.1); contains domain no description (G3D.3.90.79.10); contains domain Nudix (SSF55811) 0.368192360157064 3.90471221999543 0.00264162460294337 1 4.65377617204360 19.2590891166342 0.368192360157064 0.0828740223949738 AT5G43380_at 2.15496511603459 1.77601373790503 2.89742318422942 2.38923053596234 1.99502821525407 1.98393882709605 1.47253040400025 1.14479216888431 1.72642201158215 1.71718760563385 2.12466937204412 1.66066848384597 1.48289662472620 1.85484556098967 2.09155958146584 2.40603002320455 2.48998646041675 2.33148988473525 1.26943317443571 0.212334603382842 0.217940380469806 0.217993551260893 0.225476140998901 0.212943327114542 0.221471073778030 0.219746453249696 0.220206085484760 0.217432001931937 0.218907306307322 0.213457059506294 0.214561158273572 0.222586386232616 0.212334603382842 0.215239029402632 0.222434378569058 0.217127079181361 0.221350938780721 0.229430850959122 5 5 - 17437941 17438480 17438252.364 17437047 17439210 - gene protein_coding_gene TRUE TRUE AT5G43380.1|AT5G43380.2|AT5G43380.3 TOPP6 (Type one serine/threonine protein phosphatase 6); protein phosphatase type 1 encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) (TOPP7) [Arabidopsis Thaliana] (GB:O82733;GB:O48641;GB:Q8L761); similar to TOPP4 (Type one serine/threonine protein phosphatase 4), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT2G39840.1); similar to catalytic subunit of protein phosphatase 1 [Vicia faba] (GB:BAF31132.1); similar to protein phosphatase 1, catalytic beta subunit [Medicago sativa] (GB:CAA05491.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843)|Identical to Serine/threonine-protein phosphatase PP1 isozyme 7 (EC 3.1.3.16) (TOPP7) [Arabidopsis Thaliana] (GB:O82733;GB:O48641;GB:Q8L761); similar to TOPP4 (Type one serine/threonine protein phosphatase 4), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT2G39840.1); similar to protein phosphatase 1 catalitic subunit [Medicago sativa] (GB:CAA05493.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.428822897087269 3.90449539211664 0.00264258783515062 1 4.6534556832828 3.78988153007698 0.428822897087269 0.123512938554432 AT5G22700_at 5.02029532657241 4.27919982207273 5.17317598634905 5.11024082906013 6.03613301326529 5.04474973204479 5.05180695950474 4.66582060056304 4.88592731232115 5.48847670216206 5.64556790628269 5.58450925433458 5.46939530749466 5.76710734651528 5.43415202163276 5.95395103011531 5.70890110220343 5.44608899462585 6.20177873316202 0.224329870353088 0.219487660195844 0.222880565874762 0.217499729991287 0.224311540257175 0.217499729991287 0.219897795949043 0.226449678583494 0.235754666816766 0.223636307824373 0.226536939795313 0.225431102638630 0.219898903242101 0.225611834483339 0.223724394114340 0.218553097712374 0.247619443542872 0.230945686387336 0.217499729991287 5 5|0 -|/ 7545697 7546569 7546211.9 7545519 7547598 - gene protein_coding_gene TRUE TRUE AT5G22700.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22660.2); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.620822287132812 -3.89754075880537 0.00267367775567967 1 4.64317274811909 10.6234794684868 -0.620822287132812 0.224638662949513 AT5G50970_at 2.2852484438234 2.15161130149641 3.15116164006223 3.04569097824229 4.07738921026652 2.94195787705629 3.04743874813052 2.64137995052719 1.55138223249949 1.22170776074204 2.34537701394501 2.41281106905146 2.94332492451465 2.80231542795918 2.7206672520295 2.49490617064952 2.57071183403108 2.24056985966820 2.01849437842050 0.298841542214028 0.294991051222543 0.304369728808182 0.295707388095904 0.302609223324194 0.296779762806483 0.294229502535055 0.293071446533832 0.294322710868661 0.304468685930776 0.300063316230285 0.293071446533832 0.295261870070329 0.293071446533832 0.293071446533832 0.293071446533832 0.309641600758775 0.301746896762428 0.299784700446697 5 5 + 20754013 20754355 20754129.714 20753563 20756521 + gene protein_coding_gene TRUE TRUE AT5G50970.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G19920.1); similar to WD40-like [Medicago truncatula] (GB:ABE80202.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408) 0.592130751463007 3.89714427742565 0.00267546161643524 1 4.64258632077996 4.99949988596815 0.592130751463007 0.210748397133324 AT5G11610_at 4.86116789416039 4.89794710069033 4.93990894052461 5.28817943339128 6.16906553402054 5.31888059848367 5.52646029377141 5.05383732940086 4.04857925815043 4.50273072398018 4.98023174036794 5.23565042224678 5.15161122246974 5.1542937476592 3.91445835978932 4.24165192652276 5.06540039653821 4.70490635504314 4.56719298849355 0.203275821114886 0.203275821114886 0.206197694904984 0.204100651976111 0.209017626261890 0.212848280137732 0.210517779460489 0.205737609848600 0.228291288727539 0.203275821114886 0.207455019113400 0.203553764615493 0.208699778839631 0.205602509779410 0.215218672422684 0.203275821114886 0.21549058487893 0.204990630403865 0.211060893898861 5 5 - 3735633 3736145 3735914.636 3735351 3738218 - gene protein_coding_gene TRUE TRUE AT5G11610.1|AT5G11610.2 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G25820.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE81272.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) -0.528202644888168 -3.89440272033635 0.00268783046760583 1 4.63853075002001 9.8463608129909 -0.528202644888168 0.178911402065092 AT5G13290_at 3.09402384980026 3.29315699025249 3.63105918340964 3.69899709971122 4.53660723599514 4.69941646953879 4.09757253411574 4.46505848287751 3.82870225711546 4.28618822331761 4.33760071961581 5.12788833930646 4.40087095503708 4.30594771074898 4.57971526612937 5.01895967394424 4.24322728798448 4.15938951759163 4.20375822637611 0.238932192668163 0.233528479696038 0.243214193859017 0.232806473833774 0.232401111524506 0.236415039516960 0.230896923424025 0.233849202682757 0.249926887651743 0.230720529735487 0.235539725820519 0.234662736472446 0.232054316938742 0.235406674146296 0.232851575538066 0.233790467396269 0.233301501355658 0.241440272497884 0.229001391461798 5 5 - 4252927 4253484 4253181.909 4252845 4254897 - gene protein_coding_gene TRUE TRUE AT5G13290.1|AT5G13290.2|AT5G13290.3 protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G31880.1); similar to receptor-like protein kinase [Nicotiana tabacum] (GB:BAC07504.2); similar to Os01g0927500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045269.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719)|similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G31880.1); similar to receptor-like protein kinase [Nicotiana tabacum] (GB:BAC07504.2); similar to Os01g0927500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045269.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) -0.361322485248242 -3.89053824239062 0.0027053666918556 1 4.63281229749297 8.2534445654115 -0.361322485248242 0.0785108285618706 AT5G02910_at 4.41312797446397 5.02711697969318 6.11894029640882 6.00611249946781 6.44391122615225 6.43664540407748 5.11478256021548 4.80216783333116 3.39821978759147 4.05355111184183 5.15878120900748 5.4517219605068 5.2003373895829 5.51904731978934 5.22641582765307 5.71045166459294 5.41658095468471 5.02598384767523 4.61193725391877 0.259373272631322 0.253738168203331 0.255655866429646 0.255928307683917 0.253738168203331 0.262720236850287 0.253738168203331 0.265489829163317 0.267035866840742 0.256954540246918 0.258996558317301 0.253738168203331 0.255118139378527 0.259383899642544 0.266939121523150 0.253738168203331 0.258784638044554 0.264246510279851 0.256237257687970 5 0|5 /|+ 678259 678873 678546.3 677085 679041 + gene protein_coding_gene TRUE TRUE AT5G02910.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G28410.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE79467.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE85220.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.422821290725717 3.89004886131062 0.00270759588601999 1 4.63208799100507 10.2253011331282 0.422821290725717 0.120828021661056 AT5G20910_at 6.32600823118029 6.61887742967156 8.1225634799154 8.29739832512781 8.21272574669066 7.88363518942628 6.53547999591096 6.25254372644142 6.75901125819333 6.01257078741768 7.61198171946064 7.12262467882068 7.19636357194964 7.64119042388517 7.20316573805257 7.47702436657733 7.37706435243165 7.32555557806224 5.94033355464746 0.162455160173210 0.155933060194113 0.161805447979369 0.160475520923792 0.160663997180302 0.159769437391672 0.157246958436764 0.152607985624341 0.172875818831737 0.166777659572125 0.152161777013291 0.153136859040081 0.156111252518356 0.158969818833064 0.157179956389809 0.156843168713331 0.158037414107433 0.166562452848173 0.177399311126698 5 5|0 -|/ 7092679 7093534 7093161.667 7092514 7094448 - gene protein_coding_gene TRUE TRUE AT5G20910.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G01980.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); similar to Os09g0434200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063251.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.383791195096026 3.88788162261292 0.00271749094619538 1 4.62887998428184 14.0844922674161 0.383791195096026 0.095524468626578 AT5G52900_at 5.69925167405895 5.90978985461776 8.1264689686227 8.30757115562098 8.15936297595323 8.09185560700458 6.62426713555427 6.4546833968032 6.96522870982279 5.97014884340271 7.83565137792547 7.63721331695695 7.02245645082363 6.49335290095518 8.72351027687068 7.23780572218466 7.22621228183512 6.19109378625347 6.74645592388483 0.231965395085907 0.222067079906170 0.214658351910487 0.214658351910487 0.218178610458572 0.214658351910487 0.223083502787779 0.228488207287136 0.236340528460064 0.228019532596968 0.220317217544198 0.214658351910487 0.217319075618467 0.227843505402606 0.224372708450137 0.218706674772201 0.224267239733899 0.23461076965309 0.214658351910487 5 5 - 21470229 21470736 21470536.364 21469668 21471034 - gene protein_coding_gene TRUE TRUE AT5G52900.1 similar to hypothetical protein MtrDRAFT_AC150980g17v1 [Medicago truncatula] (GB:ABE87114.1) 0.337623131651885 3.88680138294427 0.00272243709531730 1 4.62728074381467 14.0999179326607 0.337623131651885 0.0575104722025557 AT5G66160_at 7.28937069668541 7.08959703950747 8.20466005700152 8.31766881757368 8.51472356160654 8.30972955036446 6.95656283076321 6.51946501791528 6.07514011407494 6.43117023258136 7.22220708841633 7.49467386997726 7.91453683580094 7.61974379547961 7.40822391374435 7.82404912478794 7.89117208117843 7.62670745592408 6.16332313989622 0.166137983563303 0.164562197347267 0.163502128338111 0.159774413759618 0.164142903949641 0.165037271058965 0.158221253074312 0.164818376813598 0.170459888546632 0.200849738159805 0.165874226495486 0.158221253074312 0.160226430639288 0.170050375298111 0.170907554455865 0.158221253074312 0.173059605799077 0.168424032784366 0.198880749960062 5 5 + 26463053 26464075 26463437.273 26462312 26464659 + gene protein_coding_gene TRUE TRUE AT5G66160.1|AT5G66160.2 JR700 (Arabidopsis thaliana receptor homology region transmembrane domain ring H2 motif protein 1); peptidase/ protein binding / zinc ion binding Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. similar to protease-associated zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G71980.1); similar to ReMembR-H2 protein JR702, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94173.1); similar to Os03g0167500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049082.1); similar to Os08g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060777.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.379352022355215 3.88589424701054 0.00272659788373822 1 4.62593765157893 14.5744099128511 0.379352022355215 0.0925086098493494 AT5G46320_at 2.77832872326442 2.97783413290703 3.09288842821893 3.41508216685291 2.90860710135649 3.09632232948445 3.10335911297075 3.22551359404344 3.04553574317929 3.08840673746757 3.31169360897894 3.00515215025936 3.37792167444738 3.35627446418105 2.62175508446769 3.04180197140883 3.06272682553134 3.15611781146017 2.94234556631843 0.176892005324192 0.177325420046600 0.179766880134 0.178771612954232 0.185085828350320 0.184617968711253 0.192289935329756 0.176034702380496 0.181874490643425 0.188428776247598 0.176805591439751 0.178913009054203 0.178656070247946 0.180188226349406 0.179063288185373 0.177245275519236 0.190066892502994 0.185726948943078 0.175840961450951 5 5 - 18805476 18806091 18805850.909 18805473 18806115 - gene protein_coding_gene TRUE TRUE AT5G46320.1 similar to MADS-box protein (AGL102) [Arabidopsis thaliana] (TAIR:AT1G47760.1); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPL12 (PTHR11945:SF5); contains domain MADS BOX PROTEIN (PTHR11945) -0.358023236214839 -3.88587354575015 0.00272669291205935 1 4.62590700028326 6.14579684755244 -0.358023236214839 0.0761774635309263 AT5G65710_at 5.02766646964548 5.54302296535488 5.3902962212431 5.55219969833846 6.32944418376094 5.94662107465792 6.0087771938747 6.15849775029238 3.9199184235061 5.78887740038758 5.7026208615768 6.40892138970116 6.56110125384587 6.32375640608769 5.80428893055514 6.23138630900584 6.15326506385902 6.21150897363736 5.66039348415796 0.258406392604226 0.247181337657297 0.254178218040102 0.247575124638838 0.249495292363368 0.255214008694557 0.251678418751106 0.255326878128759 0.272785510077347 0.246300005381145 0.246300005381145 0.246300005381145 0.257213894642665 0.262905158539619 0.259003008634943 0.25014682573524 0.257824879340206 0.250452526993489 0.248594171739807 5 5|0 +|/ 26311987 26312600 26312272 26309598 26312666 + gene protein_coding_gene TRUE TRUE AT5G65710.1 HSL2 (HAESA-LIKE 2); ATP binding / kinase/ protein serine/threonine kinase similar to HAESA (RECEPTOR-LIKE PROTEIN KINASE 5), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT4G28490.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G09970.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia] (GB:AAT28308.1); similar to leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia] (GB:AAT28307.1); similar to leucine-rich receptor-like protein kinase [Malus x domestica] (GB:AAC36318.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.416755947753051 -3.88429639417757 0.00273394290968395 1 4.62357162077769 11.3934003202547 -0.416755947753051 0.117470193045494 AT5G46830_at 1.37360608625226 1.87684307611325 1.69300714163742 2.14012851994019 1.91152198766069 1.52221990684908 3.19961131930487 3.45945677168074 1.56979932363825 1.44593684322584 3.48826191673016 3.66170703233995 2.98019700039731 4.06540567367065 4.50403975976748 4.54386544414227 3.10609182488834 3.43568949090810 1.88364233007011 0.255798290579761 0.249807614193685 0.255275845948142 0.249807614193685 0.25210652714544 0.255571117348248 0.251355630024544 0.251436760079975 0.257512486101294 0.250190395151473 0.252381864450328 0.251472877507246 0.259672634006087 0.257900468838640 0.264594030458899 0.264131983971433 0.252103430867902 0.253497860577614 0.250719152183942 5 5 + 19020889 19021446 19021115.727 19019946 19021481 + gene protein_coding_gene TRUE TRUE AT5G46830.1 basic helix-loop-helix (bHLH) family protein similar to ATMYC2 (JASMONATE INSENSITIVE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32640.1); similar to basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] (GB:ABD65632.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.457903604976134 3.88307677153745 0.00273956314038657 1 4.62176542238322 4.82519106792994 0.457903604976134 0.141888020581487 AT5G38300_at 3.02893182344647 3.20792536303619 3.82893301956965 3.72124838934701 2.76541699929368 2.93576326420746 3.49173840929311 3.41206571211157 3.53845579953841 3.2522479865558 3.55605197345014 4.12208844559833 3.87948375931452 4.11561783155256 4.23910143756522 3.26522683266026 3.68882939706767 3.67006560113080 3.26005158779824 0.199067131149584 0.201171745630520 0.200306943134073 0.211257477018385 0.202374561818114 0.204528907709091 0.195170017052875 0.21963534706263 0.202710582824371 0.205177443032265 0.203348624114934 0.199110966500724 0.208319955574515 0.208039495194445 0.223431693419700 0.199071859955403 0.200098316534824 0.195170017052875 0.196120071432219 5 5 + 15323572 15324003 15323785.455 15323162 15324238 + gene protein_coding_gene TRUE TRUE AT5G38300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67035.1) -0.329048916611845 -3.88073469132533 0.00275038959189106 1 4.61829635368341 6.8826578480831 -0.329048916611845 0.0486404468192992 AT5G64030_at 8.18603216641605 8.29037218027516 8.47570320268988 8.44307502156943 8.97987933918324 8.50763588534477 8.69678154172101 8.93538746829137 8.36836347589368 8.6182119159472 9.48398971945146 9.60910526293285 9.22951716397639 9.13240069936867 9.57041975493517 9.45510156147688 8.7957406266862 9.09059175201796 8.53910035598903 0.128508699854356 0.125072228795239 0.126334770417386 0.131055201731609 0.124785063552833 0.127385502010842 0.130105849052498 0.128189942416843 0.131944232898828 0.127419364384555 0.124617428532749 0.127454851209764 0.125569159198743 0.127674760826569 0.127655640803418 0.122961192110130 0.128573205667834 0.129166986176935 0.133098873191900 5 5|0 +|/ 25644689 25645457 25645163 25641263 25645701 + gene protein_coding_gene TRUE TRUE AT5G64030.1 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G51070.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G29470.2); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G34300.2); similar to dehydration-responsive protein, putative [Oryza sativa (japonica cultivar-group)] (GB:ABA96619.1); similar to dehydration-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22395.1); similar to ankyrin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82580.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) -0.379583746129879 -3.87416302826413 0.00278100602458127 1 4.60855848055964 17.4665668007942 -0.379583746129879 0.0934972732822395 AT5G25590_at 2.47011337863670 2.22597782127904 2.21667318040390 2.09652179592369 2.19208835176531 2.70806207192938 2.83883207577576 3.392067427312 3.17925583577886 3.15515218079253 4.08242646025296 4.32035411441885 3.86251627535518 3.7431214630179 4.20065752352872 3.53511857455271 2.78762665925201 3.67482872457238 3.73422757142146 0.204996914898883 0.199077267829519 0.204287688040627 0.199077267829519 0.199279633908678 0.200387661411302 0.204842705495235 0.201070986283589 0.201348198840849 0.200944550114825 0.203614344310269 0.199077267829519 0.202261830691454 0.205526352313268 0.203874078155897 0.201210713737617 0.205999665699071 0.201791774360252 0.202141536045872 5 5 - 8906688 8907256 8907038.727 8906601 8909923 - gene protein_coding_gene TRUE TRUE AT5G25590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52320.2); similar to Spectrin repeat [Medicago truncatula] (GB:ABE93358.1); similar to Os05g0394200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055459.1); contains InterPro domain Protein of unknown function DUF632; (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630; (InterPro:IPR006868) -0.451619774021472 -3.87082448827439 0.00279669544512303 1 4.60360919634909 6.08356355639478 -0.451619774021472 0.139127421511894 AT5G15710_at 6.28942404827268 6.64393268282274 7.47411935573576 7.48009336225554 8.00112031373332 8.16876457067385 6.0648186132961 6.11126275752452 5.82718241037057 6.00962382365822 7.46047309442712 6.91164841817173 7.09228741063883 7.29372913351715 7.06014066154044 7.4093045660158 7.48796510339061 6.82789275978008 5.92242778358473 0.219055740450955 0.208594157211554 0.210464321419678 0.206679531012254 0.215031952576225 0.212720220431584 0.208676308303872 0.213823015190789 0.219155991774241 0.225120823896495 0.206679531012254 0.207518280868539 0.213456600178772 0.215455512224325 0.211161191575724 0.206679531012254 0.209000132669376 0.211413490909934 0.213181969783628 5 5 + 5123569 5124073 5123830.182 5122495 5124376 + gene protein_coding_gene TRUE TRUE AT5G15710.1 F-box family protein similar to UFO (UNUSUAL FLORAL ORGANS), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G30950.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96837.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 0.347205861096844 3.86719639282781 0.00281385009516449 1 4.5982289449906 13.5855293710258 0.347205861096844 0.0683453572178239 AT5G18290_at 2.37024326979636 2.98535394297792 2.78898458523276 2.97241751670543 2.77018802038533 2.57717162665997 2.59046893310901 3.17399066713674 3.49183415951919 2.97879976800264 3.18339826478753 3.03183923356601 3.02737400261289 3.1518429813047 2.58072984532456 2.69745722804571 2.45557946821815 3.08632842679356 2.72596891619061 0.235134765628045 0.231304778885584 0.233059692056645 0.235997151306716 0.231542441025452 0.23104149076374 0.231261832271771 0.22722167522102 0.229439999944393 0.233779969290979 0.237372352543227 0.22722167522102 0.227340144537645 0.24298307967931 0.232490325958695 0.22722167522102 0.24073682923304 0.251155517391585 0.22722167522102 5 5 - 6055230 6056229 6055718 6055030 6056702 - gene protein_coding_gene TRUE TRUE AT5G18290.1 SIP1;2 (SMALL AND BASIC INTRINSIC PROTEIN1B) Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER Identical to Probable aquaporin SIP1.2 (Small basic intrinsic protein 1.2) (SIP1.2) [Arabidopsis Thaliana] (GB:Q9FK43); similar to SIP1,1 (SMALL AND BASIC INTRINSIC PROTEIN 1A) [Arabidopsis thaliana] (TAIR:AT3G04090.1); similar to small basic intrinsic protein 1 [Vitis vinifera] (GB:ABD46741.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) -0.477183963622398 -3.86585645705278 0.00282021333726339 1 4.59624144973608 5.762278801535 -0.477183963622398 0.153791151452644 AT5G43170_at 3.68734283882185 3.92745126425086 3.50948855058763 3.45638002517562 2.81214442765014 3.70274913400699 3.0380201456946 3.09591300473226 2.85185238734166 3.26201318615798 3.45192114886894 3.19354025444106 3.02848322684213 2.95104972340445 3.47710863686397 3.16696580867503 2.74708220748208 3.25826443852298 3.01777348263009 0.23587549991938 0.238866402805401 0.238352413414511 0.235691070089381 0.242381939991565 0.240558990895990 0.233260495275541 0.229436301450763 0.232552852012553 0.235207509732297 0.238470285643048 0.229436301450763 0.236890331357075 0.229854082092171 0.237072516846325 0.230247503296515 0.242488281445159 0.234249302480680 0.236324447660128 5 5 - 17348278 17348718 17348490.182 17348173 17348874 - gene protein_coding_gene TRUE TRUE AT5G43170.1 AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor. similar to STZ (SALT TOLERANCE ZINC FINGER), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G27730.1); similar to zinc-finger protein 1 [Datisca glomerata] (GB:AAD26942.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.488666475017348 -3.86354029756672 0.00283124791190706 1 4.59280537368895 6.50527698187207 -0.488666475017348 0.160204217993675 AT5G14590_at 8.42892611720312 8.39971250425984 9.23142260664018 9.1676894048145 9.02442805800545 8.6294825897038 8.74004651439227 8.52347984041998 7.79262656580119 8.05900152965003 8.35209795590056 8.39198553439118 8.2813958315144 8.37457921010725 8.49050937724723 8.47724958120158 8.42410188055961 8.40898415850816 7.89534425975856 0.169013966858954 0.171491135151380 0.167213462093940 0.171220564763039 0.170061945543871 0.184199198698916 0.169186204671034 0.174439882049179 0.194178661107251 0.179225811774889 0.169973388355921 0.168857150520857 0.168431143682188 0.173339573443417 0.171352855395632 0.167213462093940 0.176030639521823 0.180155770019490 0.178236488615385 5 5|0 -|/ 4703566 4704631 4704278.5 4703301 4706741 - gene protein_coding_gene TRUE TRUE AT5G14590.1 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative similar to ICDH (ICDH), isocitrate dehydrogenase (NADP+) [Arabidopsis thaliana] (TAIR:AT1G54340.1); similar to isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G65930.1); similar to NADP-specific isocitrate dehydrogenase [Lupinus albus] (GB:BAC77065.1); similar to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] (GB:CAA65504.1); similar to isocitrate dehydrogenase (NADP+) [Nicotiana tabacum] (GB:CAA65503.1); contains InterPro domain Isocitrate dehydrogenase NADP-dependent, eukaryotic; (InterPro:IPR004790); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804) -0.35899161433422 -3.86043723966707 0.00284610184419100 1 4.58820078314039 16.9260336508876 -0.35899161433422 0.0788868130209158 AT5G15610_at 5.90456267852573 5.92186916500504 6.64734837123485 6.42653325056297 6.91695400408171 6.73844990248436 6.347877292363 5.70150280622908 5.84645652374705 5.99530291680574 6.80033288440489 6.64887425219202 6.34317175200572 6.19104624045117 6.87561571336243 6.27488034107174 6.61894669161878 6.18845334959171 6.04199063522074 0.156740583759519 0.151778976082119 0.152104204244342 0.158933716437995 0.155602748186326 0.162827066081259 0.157967170889079 0.159351236249430 0.161390956973955 0.167771180626728 0.151778976082119 0.151778976082119 0.157567111955947 0.161740809330828 0.165473608935991 0.159153773753734 0.159653112188531 0.156170598752558 0.161629498888818 5 5|0 +|/ 5081058 5081906 5081507.6 5079516 5082208 + gene protein_coding_gene TRUE TRUE AT5G15610.1|AT5G15610.2 proteasome family protein similar to proteasome family protein [Arabidopsis thaliana] (TAIR:AT3G02200.2); similar to unknown [Solanum tuberosum] (GB:ABB29949.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) -0.421491768495111 -3.85711943162837 0.00286207346248004 1 4.58327609523337 12.5525947729834 -0.421491768495111 0.122211703804183 AT5G47190_at 9.51729833013423 9.37155208307538 9.20923620334003 9.12106671069012 9.98940375837063 9.58917749606018 9.50671935038901 9.40199557368551 9.90041738016245 9.71202568519318 10.2927636285616 10.7280029578792 10.1741852540661 10.4715363259982 11.0724874860175 10.5136821496584 9.7716124033662 10.3627316067502 9.75855408083637 0.113005044064451 0.106335983308358 0.111551291488957 0.109075653663258 0.104007639164634 0.107416193332923 0.105772291304075 0.105883992728176 0.106479903540568 0.104703182484455 0.107892526102897 0.104612497976638 0.103059924872332 0.106348998021506 0.108693846834835 0.103059924872332 0.112166896866963 0.103059924872332 0.103059924872332 5 5|0 -|/ 19181660 19183041 19182576.111 19181475 19183334 - gene protein_coding_gene TRUE TRUE AT5G47190.1 ribosomal protein L19 family protein Identical to 50S ribosomal protein L19-2, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8RXX5;GB:Q8LBV7;GB:Q9LVU0); similar to ribosomal protein L19 family protein [Arabidopsis thaliana] (TAIR:AT4G17560.1); similar to plastid ribosomal protein L19, putative [Brassica oleracea] (GB:ABD64915.1); contains InterPro domain Ribosomal protein L19; (InterPro:IPR001857) -0.356217579788034 -3.84989487851236 0.0028971751394215 1 4.57254744245246 19.5701599925187 -0.356217579788034 0.0774241147596156 AT5G66340_at 1.45498110588618 1.58765295262802 1.37797342660029 1.56442049774161 1.39273943275131 1.54993574318711 1.61233525065297 1.37838851033680 1.64530998977038 1.8415920776253 1.21894108898679 1.39877544540598 1.12041190952389 1.93193051497445 1.78522385167815 1.27355645522802 0.924040127103821 1.08990720576108 1.82578751608217 0.210581512073829 0.213244961629042 0.212839637021636 0.203269857048584 0.212785816938346 0.208494551553536 0.209694785252697 0.214814492378091 0.203269857048584 0.204302550063422 0.203269857048584 0.205344858701992 0.203269857048584 0.206136282760974 0.206561240084494 0.207593934122677 0.221670361403961 0.208596566292668 0.205214731163624 5 5|0 +|/ 26520006 26520352 26520230.3 26519728 26520379 + gene protein_coding_gene TRUE TRUE AT5G66340.1 unknown protein -0.339714501948905 -3.84965695068256 0.00289833873767083 1 4.57219399455285 3.04667579130240 -0.339714501948905 0.062827682568159 AT5G65360_at 7.03503489339387 7.3009786198894 8.03611124331369 8.16230593857554 7.19596892365608 6.72065463041814 7.8860712904964 7.74824479661135 7.27835398701109 7.62736184011968 8.7561922453361 9.20364870484174 7.50528756818625 8.29990252037213 9.38059683037668 8.37572798631793 8.03876749502893 8.08499399774056 7.14617735397644 0.199456853622285 0.184881936807985 0.187779391471599 0.186782186097356 0.181734965242209 0.189826822833473 0.185934876700592 0.184923688832846 0.193375003633235 0.197427245475767 0.179307681750965 0.178454823596445 0.185555364941546 0.185961226260143 0.194985678586587 0.178454823596445 0.188202395148503 0.204783792893422 0.194990677454472 5 5 - 26137369 26137658 26137482.545 26137085 26137807 - gene protein_coding_gene TRUE TRUE AT5G65360.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.385806719548886 -3.84866915799646 0.00290317478825695 1 4.57072652230962 15.4138066564914 -0.385806719548886 0.0996486842572897 AT5G40230_at 4.14644061026972 4.83737252144514 3.78585753043605 3.82428475024180 4.25190588342502 3.604027803621 2.45929258471902 2.28023852094821 3.21032155199729 2.64905058429053 2.14668484950902 2.25734553348482 2.85700469315228 2.49371095950274 2.19777375166709 2.25235793213099 2.23845555733541 2.84910523117789 2.79631390530457 0.292089975351641 0.301003383948552 0.305107451276158 0.29724414493047 0.293835223980916 0.30640442449326 0.284521857129935 0.290293337736336 0.284521857129935 0.290503605695006 0.286705696182174 0.294937794128133 0.292551474476916 0.29250968757332 0.291196916770095 0.287859795287529 0.284521857129935 0.284521857129935 0.292376578159019 5 5|0 -|/ 16097069 16097970 16097582.5 16096876 16098963 - gene protein_coding_gene TRUE TRUE AT5G40230.1 nodulin-related similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT5G40240.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE93902.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) -0.499215423559908 -3.84791071413688 0.00290689368407744 1 4.56959968400663 6.29706927265116 -0.499215423559908 0.166947971663781 AT5G16550_at 7.93361772894173 8.67595242525955 8.95499492547684 9.06086665750395 9.65915389517641 9.07966242345366 8.50290777685377 8.72331317667935 6.42171584127641 7.10681831420933 8.82121534869521 8.32232743192003 8.86591858485369 8.88242332451557 8.12028307170496 8.4133844246295 8.6963061074615 8.98442024575512 6.27532975297532 0.254316146670727 0.254316146670727 0.265976291307130 0.259904898882724 0.254316146670727 0.264926610705201 0.267804101550564 0.261932938280550 0.343176791230299 0.265863383390642 0.260858875016559 0.261484228253009 0.259399643896959 0.254316146670727 0.26595547327901 0.254316146670727 0.280092992686034 0.274186995460448 0.277762102416248 5 5|0 +|/ 5405683 5406588 5406084.2 5405353 5406890 + gene protein_coding_gene TRUE TRUE AT5G16550.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26450.1); similar to Os08g0425800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061840.1) 0.501863347335209 3.84768603951608 0.00290799628735869 1 4.56926586477594 16.4435950196326 0.501863347335209 0.168375921082305 AT5G48870_at 7.8738728795938 7.77240274701694 8.53680210130385 8.39271454762128 8.56670996399994 8.21365218803575 8.06942021858896 7.71908080900842 7.41296960919551 7.56272212185522 8.10743245141045 8.17388925125117 7.76686280673284 7.85527916444244 8.0445885364925 7.99254861070258 7.90684621888762 7.80694625298241 7.26535800108706 0.130095640099758 0.124440814816473 0.128965420634885 0.130051335583413 0.130240003104768 0.134792733749590 0.123967807292852 0.134370194447226 0.133678518618585 0.131150794468448 0.129206552438186 0.129628569367105 0.126077211901153 0.124729658842650 0.131490181545071 0.122659853156022 0.128373634113940 0.127756195674490 0.136233081951440 5 0|5 /|+ 19830831 19831559 19831164 19830564 19831780 + gene protein_coding_gene TRUE TRUE AT5G48870.1 SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1) SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. similar to Os05g0389300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055432.1); similar to U6 snRNA-associated Sm-like protein (ISS) [Ostreococcus tauri] (GB:CAL54562.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649) -0.373966195110997 -3.84747270897832 0.0029090436214526 1 4.56894889423393 15.8283231347255 -0.373966195110997 0.0913172757002097 AT5G46590_at 1.18638222917326 1.47644180633262 2.50274869857463 3.18219802651926 1.70584266913338 2.11409521824818 1.46661130556809 1.74599660255580 1.36839212478694 1.84031104563458 1.45097632113655 1.63322380519249 2.23140865504109 1.90667892802736 1.64868611380667 1.76628380600850 2.42360140925933 1.78622980238624 1.38487359040099 0.189763962676604 0.191597786505573 0.196649837189053 0.201574646536838 0.187427699014196 0.191270584869099 0.187864969769486 0.194217491311735 0.204615837280096 0.198323511860322 0.196613626796813 0.191452314547569 0.191001219332963 0.189252508780153 0.187427699014196 0.191956577389226 0.187427699014196 0.189166476051360 0.202957639398794 5 5 + 18923277 18924013 18923659.727 18922552 18924075 + gene protein_coding_gene TRUE TRUE AT5G46590.1 ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor similar to ANAC071 (Arabidopsis NAC domain containing protein 71), transcription factor [Arabidopsis thaliana] (TAIR:AT4G17980.1); similar to nam-like protein 11 [Petunia x hybrida] (GB:AAM34774.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.474963301052701 3.84679350266429 0.00291238075937634 1 4.56793967623796 3.61607874887054 0.474963301052701 0.153864208167682 AT5G07920_at 5.30119064819865 5.65825028001717 7.22078333670901 7.35596767000292 7.70517296688999 7.27244496059081 5.58986132545775 5.91723534957029 5.98568324360799 5.7630697067811 7.02171669054278 7.08195636696617 7.27769129084394 7.13228575851972 6.22281385685557 7.42322688131839 6.51785366572908 7.15129633857247 5.77510865503043 0.231106270794295 0.231533933200280 0.240550464812558 0.227840355631560 0.23388939532597 0.24038070642073 0.228465025074213 0.238398519679235 0.238937537358620 0.235679931917250 0.228360731385316 0.226040830026006 0.225932227986346 0.242287993860990 0.230884880451757 0.225641208810529 0.245071760179916 0.233575468026968 0.229921562015471 5 5|0 -|/ 2525292 2526094 2525664 2524779 2529331 - gene protein_coding_gene TRUE TRUE AT5G07920.1 DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1); diacylglycerol kinase diacylglycerol kinase Identical to Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase 1) (DGK 1) (DAG kinase 1) (DGK1) [Arabidopsis Thaliana] (GB:Q39017;GB:Q9SD92); similar to ATDGK2 (DIACYLGLYCEROL KINASE 2), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G63770.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99054.2); similar to putative diacylglycerol kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07206.1); similar to Diacylglycerol kinase 1, putative [Oryza sativa (japonica cultivar-group)] (GB:ABF96709.1); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219) 0.408340222342014 3.84497159599179 0.00292135199175397 1 4.56523224074578 12.9125594711671 0.408340222342014 0.114816737276994 AT5G25990_at 1.44060142201581 1.23076444873271 1.02801230700890 0.844302298434498 1.10612993303592 0.954701833754646 1.67608166166921 1.49610732884906 0.945374945881728 1.21918230861242 0.704774609951049 1.06932329191224 1.04491614263508 1.16785455606434 1.36360129649276 1.28181897655289 1.18301104134278 1.00510627150132 1.28575071594778 0.208573631008819 0.205596015759958 0.204760743361011 0.209091579709620 0.200277101550231 0.200832174956874 0.208420611777119 0.216796682761509 0.204086167315018 0.201752256943034 0.200927648746273 0.205114403920175 0.203334888556923 0.215352340317005 0.210360393169963 0.207807669131086 0.208232540563788 0.213166608661012 0.201729113495034 5 5|0 -|/ 9076161 9077330 9076808.375 9076110 9077382 - gene protein_coding_gene TRUE TRUE AT5G25990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25970.1); contains InterPro domain Protein of unknown function DUF266, plant; (InterPro:IPR004949) -0.339394378317083 -3.84241088595313 0.00293400976348195 1 4.56142616294146 2.34841436924786 -0.339394378317083 0.0631358231610467 AT5G59400_at 7.92702382694162 7.77377242676396 8.81575002501934 8.80361013011568 8.35771095114032 8.10176460855095 8.83588551035953 8.45249701612552 7.28873423590304 7.49039924783762 8.63003390004687 7.73260585987518 8.0686863685198 8.1589144340049 7.99730788897767 7.58027995160715 8.27422720906105 8.84798974560145 7.26920002415422 0.125016638881318 0.122961027167607 0.127199895767067 0.12197423375291 0.125586958765618 0.127485950618059 0.122846237901497 0.12197423375291 0.132102994172173 0.134011856884748 0.122885878368444 0.125923886864301 0.126706902100226 0.126643667204902 0.125633085910812 0.124047504738624 0.133335866054337 0.12197423375291 0.126401497758163 5 5 + 23975585 23976690 23976096.182 23974963 23976933 + gene protein_coding_gene TRUE TRUE AT5G59400.1|AT5G59400.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11960.1); similar to unknown protein [Oryza sativa] (GB:AAK73156.1); contains domain DNA ligase/mRNA capping enzyme, catalytic domain (SSF56091) -0.363856278416282 -3.8421452628054 0.00293532601810381 1 4.56103130752282 16.1388518980488 -0.363856278416282 0.0840925723743352 AT5G18810_at 2.8300409749191 3.05898377088655 3.55706337450162 3.28955889480927 2.42893667364988 2.84476251045371 2.63811494899825 3.03573384419171 2.94198519343849 3.27628131937614 3.35694415041732 2.94628389270346 3.35951042318247 3.02618897513793 3.07572965250122 3.31131035250806 3.27630798434652 3.68253553751374 3.6109807173859 0.213246550082790 0.215634640735305 0.222224209961233 0.216230383621836 0.212409759370145 0.220670903913997 0.214518435151445 0.212409759370145 0.221084853411020 0.227159651393763 0.216618116192928 0.222892802801488 0.21683733721106 0.224303227569459 0.223714459564172 0.217113441903123 0.218928308263107 0.212409759370145 0.212409759370145 5 5|0 -|/ 6270439 6271133 6270816.778 6268720 6271327 - gene protein_coding_gene TRUE TRUE AT5G18810.1 SCL28 (SC35-like splicing factor 28); RNA binding encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks. similar to SR33 (SC35-like splicing factor 33), RNA binding [Arabidopsis thaliana] (TAIR:AT1G55310.1); similar to Os03g0363800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050168.1); similar to RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96108.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.410870689592585 -3.84039284514464 0.00294402525538582 1 4.55842606006978 6.22578293127077 -0.410870689592585 0.116729875058466 AT5G26630_at 2.64710990555148 2.48997779650364 2.80336804487602 2.37452574817327 2.57003164225768 2.99059627866759 2.67581372405756 2.49476572826081 3.06247295810475 3.16813658213103 2.90007688216396 2.90531155156993 3.42630220063830 2.66690924195348 3.43381921511196 2.65094319226639 3.02100868960446 3.40844918503313 3.31704730759317 0.196074928780938 0.191570719839549 0.191570719839549 0.201793774178451 0.192662474744359 0.197906118920066 0.191570719839549 0.197416609337209 0.200576551557839 0.194811808012467 0.194044766522875 0.194477154100069 0.208616188527885 0.220479454884566 0.200104578970683 0.196880006196834 0.201127291309658 0.198323487335974 0.195598369000193 5 5 + 9350921 9351344 9351090.727 9350818 9351474 + gene protein_coding_gene TRUE TRUE AT5G26630.1 MADS-box protein (AGL35) similar to AGL80/FEM111 (AGAMOUS-LIKE80), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G48670.1); similar to putative MADS-box protein AGL35 [Oryza sativa (japonica cultivar-group)] (GB:BAD81343.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.403107487574834 -3.83820884102462 0.00295490448125513 1 4.55517861996372 5.74785100974468 -0.403107487574834 0.111918239562168 AT5G52360_at 2.65452709845857 2.51231359990807 2.60704677974579 3.08466350624554 2.34944996016494 2.92416331739219 2.64812433097140 2.97478968727562 3.2744048691788 2.95737715296872 3.24345660805704 2.40750474677187 3.32430244014975 2.90652719945471 2.94548008488932 2.98179966568164 2.88915813248388 3.34700681018616 3.24384054545236 0.195905531832896 0.190901532922229 0.195157507336270 0.196406848036885 0.206348974359297 0.192401227089771 0.195955817326324 0.201796901816047 0.197135529771555 0.194217519960297 0.195082276073505 0.199131279221477 0.191796553540067 0.191003006205387 0.203272523939061 0.190901532922229 0.205488481112443 0.194689965035135 0.199715177164329 5 5|0 -|/ 21275384 21275843 21275632.8 21275160 21276568 - gene protein_coding_gene TRUE TRUE AT5G52360.1 actin-depolymerizing factor, putative similar to actin binding [Arabidopsis thaliana] (TAIR:AT4G25590.1); similar to pollen specific actin-depolymerizing factor 2 [Nicotiana tabacum] (GB:AAL91667.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) -0.455003440681535 -3.83805850593403 0.00295565488455318 1 4.5549550603843 5.80148244343322 -0.455003440681535 0.143264609109547 AT5G50410_at 5.4371554083265 5.58610027720326 6.85921811961935 6.8680212658185 7.84622530871929 7.0450506218422 5.95304447597195 5.56468544713195 4.84837559466194 4.5662672543937 6.19192344200033 6.45231048901703 5.66647553704588 6.22487065194137 6.85052642936572 6.15449800611849 5.72253649089236 6.72303194221622 4.87081276876977 0.231050908853063 0.224276578176527 0.227253028152823 0.231249183361095 0.242275870721277 0.243347686029568 0.230661460974531 0.237757567286598 0.229174881609714 0.231145313629784 0.231033934767254 0.228134498161297 0.234784264440449 0.240426695502735 0.232848065170642 0.230033628170004 0.238329006409639 0.231630618989642 0.237286264970488 5 5|0 -|/ 20545684 20546825 20546381.7 20545425 20547053 - gene protein_coding_gene TRUE TRUE AT5G50410.1 similar to Os08g0531200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062332.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD09029.1) 0.477385820984177 3.83177722241647 0.00298718587963150 1 4.54561164482499 11.8999826970040 0.477385820984177 0.156225876141905 AT5G20980_at 4.6858903944341 4.61524037471296 5.30439162136428 5.1571527090766 4.94724319486661 4.89551164047884 4.83397922513652 4.96744473274096 3.94144701707728 4.70784734808554 5.49701234457371 5.57308959542868 5.13391640620191 5.05237658567497 5.67599489143578 5.2886377328849 5.31221722534445 5.19852353956985 4.68505680371495 0.181179555834128 0.177511446695765 0.192257634201355 0.195852438183922 0.188014193785612 0.195443895578071 0.181453536119665 0.181909413021773 0.189175316493732 0.183910681225613 0.179175009761773 0.186169291559320 0.192014036895914 0.177097558521780 0.178221525497476 0.179649809136886 0.191865466412184 0.188479456409694 0.179952468978093 5 0|5 /|- 7124408 7125132 7124672.889 7122802 7128361 - gene protein_coding_gene TRUE TRUE AT5G20980.1|AT5G20980.2 ATMS3 (METHIONINE SYNTHASE 3); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase|ATMS3 (METHIONINE SYNTHASE 3) encodes a plastidic methionine synthase, involved in methionine de novo synthesis in the chloroplast similar to AtMS2 (Arabidopsis thaliana methionine synthase 2), 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G03780.2); similar to ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G17920.2); similar to 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme) (GB:Q42699); similar to methionine synthase [Nicotiana suaveolens] (GB:ABI95860.1); similar to methionine synthase [Solanum tuberosum] (GB:AAF74983.1); contains InterPro domain 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; (InterPro:IPR006276); contains InterPro domain Prismane-like; (InterPro:IPR011254); contains InterPro domain Cobalamin-independent synthase MetE, N-terminal; (InterPro:IPR013215); contains InterPro domain Methionine synthase, vitamin-B12 independent; (InterPro:IPR002629) -0.316343878799418 -3.82810008047657 0.00300580659809233 1 4.54013947318398 9.81898411815062 -0.316343878799418 0.0375811295040770 AT5G23340_at 5.92798977961014 6.24639917213315 6.80845304054947 6.94582185314368 8.24383226020776 7.82556555269536 5.98397767740452 6.1461802647344 5.6169411499299 5.58493537045875 7.09669193672211 6.8773592033655 7.44180227528884 7.22527519484984 7.06218834325414 7.47580806752783 7.57898997116317 7.43669847533436 6.20312544772889 0.187471694135621 0.190963052853899 0.188504595596309 0.195012010093202 0.193912030871932 0.196577850761052 0.195362713585795 0.204040130722084 0.200038131859323 0.202885480857734 0.187783496254738 0.1852417800058 0.190274621731077 0.189857686320814 0.197227615849906 0.184524910934621 0.193140426661299 0.194514242063291 0.189398882024161 5 5 + 7857417 7857962 7857649.182 7856192 7858322 + gene protein_coding_gene TRUE TRUE AT5G23340.1 protein binding similar to F-box family protein (FBL4) [Arabidopsis thaliana] (TAIR:AT4G15475.1); similar to putative F-box and leucine-rich repeat protein [Jatropha curcas] (GB:ABI64127.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.381452230734916 3.82697873471276 0.00301150896767276 1 4.53847037781762 13.3040369531318 0.381452230734916 0.0981254202951086 AT5G14380_at 1.95266706429771 1.97042874491525 2.00240913835125 2.13744291397488 1.73735580943624 2.10458049232416 1.91218724850329 2.37787358509180 3.49516139088262 2.23763773286763 2.40258000148024 2.38024522958038 2.38946950304718 2.41961299153631 2.66535888743130 2.05710136406183 2.23041128718164 2.8686994445492 2.35583826979909 0.202407691091128 0.201507778733292 0.204521174047613 0.222645864833065 0.210767015089452 0.206897723595025 0.218301126507888 0.201876353887914 0.226155910886176 0.205142313198756 0.198347775965787 0.201937799730871 0.204551705622976 0.203786891899969 0.201156290598239 0.207547724006637 0.213449384601665 0.206483106425671 0.198541839126658 5 5 - 4636127 4636519 4636274.909 4635800 4636679 - gene protein_coding_gene TRUE TRUE AT5G14380.1 AGP6 (ARABINOGALACTAN PROTEINS 6) Identical to Classical arabinogalactan protein 6 precursor (AGP6) [Arabidopsis Thaliana] (GB:Q9LY91;GB:Q9XFR4); similar to AGP11 (ARABINOGALACTAN PROTEIN 11) [Arabidopsis thaliana] (TAIR:AT3G01700.1); similar to arabinogalactan protein [Brassica napus] (GB:AAC37509.1) -0.391646302302643 -3.82444480994284 0.0030244361634141 1 4.53469808412432 4.5858167761743 -0.391646302302643 0.105303063265952 AT5G55730_at 3.05711059761628 3.51228546750514 3.3012336986023 3.13153064920807 2.58823113847434 3.29413265686050 3.98895755527944 4.54562550106994 3.85850036306396 4.85013423223526 6.2888107572458 7.51428320821864 4.99467707042985 5.440511425239 7.30793926538226 5.5765323775463 4.18689527503236 5.50711323229213 4.9749557098969 0.253473742978139 0.248877975350004 0.264687111473417 0.267680663005408 0.250178371017925 0.258593200770883 0.252875639634943 0.248358139314698 0.247979654432840 0.250706287822545 0.251669882813126 0.272754462795331 0.247914515014341 0.251029880469657 0.268563114638435 0.247162182654147 0.251065136793558 0.247563153977558 0.250977861723934 5 5 - 22575628 22576093 22575800.818 22575374 22577687 - gene protein_coding_gene TRUE TRUE AT5G55730.1 FLA1 (FLA1) fasciclin-like arabinogalactan-protein 1 (Fla1) Identical to Fasciclin-like arabinogalactan protein 1 precursor (FLA1) [Arabidopsis Thaliana] (GB:Q9FM65;GB:Q8L8T1); similar to FLA2 (FLA2) [Arabidopsis thaliana] (TAIR:AT4G12730.1); similar to putative fasciclin-like arabinogalactan protein [Salicornia europaea] (GB:BAE75863.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -0.514425461545284 -3.82195261288534 0.00303720674371777 1 4.53098708795414 8.634034455488 -0.514425461545284 0.176834385729050 AT5G12100_at 3.67050153309425 3.72156235914394 3.96407374332375 4.00034636884768 4.35534780003567 4.18305537211473 3.63170020772657 3.58121146872900 3.58647548016514 3.85990226194556 4.07971945864072 4.25504522245378 4.19855568916466 4.21384149546424 3.99782959256818 4.19334923915436 4.18732223088349 3.83786138971582 3.87965449825986 0.174270636074844 0.173357196378169 0.17292615609787 0.169972152965439 0.170241237744690 0.170834573038266 0.172787661476009 0.166958276840681 0.169845158105324 0.166958276840681 0.170787054019583 0.166958276840681 0.168620379305352 0.175745279166772 0.169399354085370 0.170754088925831 0.170034546888574 0.170894215620671 0.169753786525687 5 5 + 3913280 3913776 3913517.364 3911364 3914081 + gene protein_coding_gene TRUE TRUE AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G65560.1); similar to putative fertility restorer homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC98691.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.312698552490255 -3.8189810133401 0.00305250717112164 1 4.52656117427322 7.83636716656654 -0.312698552490255 0.0329061997563303 AT5G05180_at 1.80997598899453 1.91346605299182 2.30957134315959 2.16221202372562 2.11451967162378 2.33902681128959 2.1528233795723 1.85047089387890 2.32405037035133 2.41073453763416 3.41346865729789 3.45584309028941 2.77940803587882 3.31485089422268 3.93542199993659 3.07092384065601 2.59758135871163 3.11070736237212 2.16171488487291 0.196504806913875 0.201141443544322 0.198898152483715 0.205390886844884 0.196197011287074 0.196197011287074 0.196197011287074 0.198713334062814 0.196197011287074 0.202499039901550 0.202263127293848 0.201020967176605 0.197402920185745 0.198897843646566 0.209546770853907 0.197003601615785 0.201342113676684 0.200748365011135 0.200082444474390 5 5 + 1537801 1538285 1538077.182 1536227 1538493 + gene protein_coding_gene TRUE TRUE AT5G05180.1|AT5G05180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10880.1); similar to Os05g0168800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054757.1); similar to Os01g0168100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042126.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE94140.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10880.1); similar to Os05g0168800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054757.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE94140.1) 0.347194336925916 3.81838323745754 0.00305559471625707 1 4.52567070440623 4.8358127302579 0.347194336925916 0.072237718877019 AT5G38900_at 7.1575979651917 7.20880981971448 8.64396523356187 8.60667696058517 7.24542250023667 6.48495592279916 2.36568492604165 2.37220422844928 3.22470770325889 3.21332148799546 2.53303758376139 2.87411416348260 2.8866905402955 2.76780496764278 2.49600399711257 2.62276110092743 3.46398437259896 2.24555806490651 2.8990827476464 0.255845290461364 0.261505658295104 0.255457059606277 0.261129332168239 0.263042145601177 0.251670167540969 0.251756560246125 0.25232703441116 0.250019419144304 0.250774096773855 0.250067302383679 0.24877443023015 0.247871137812201 0.25655609903634 0.254973604071741 0.247871137812201 0.262844301756609 0.254105778772366 0.257878726821423 5 5|0 -|/ 15590979 15592094 15591421.875 15590735 15592848 - gene protein_coding_gene TRUE TRUE AT5G38900.1 DSBA oxidoreductase family protein similar to DSBA oxidoreductase [Medicago truncatula] (GB:ABE87781.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain DSBA oxidoreductase; (InterPro:IPR001853); contains InterPro domain Disulphide-bond formation facilitator, insertion; (InterPro:IPR010986) 0.433281756895061 3.81656825786124 0.00306498908590241 1 4.52296675467647 9.1849721921431 0.433281756895061 0.132062932239784 AT5G52740_at 3.97200046660542 3.96086186390397 5.71997688629229 5.64833799307387 4.65179457176538 4.84302546864857 1.90267411653862 2.55532001390473 3.11419362200743 3.04600470172369 2.66650808119608 3.15955448150788 3.11802066986600 2.9226457051359 3.04470789658898 3.32507370686998 2.87727621210074 3.15428219319579 3.04271481571419 0.22545994314494 0.231455589589496 0.242502829287707 0.243220330929770 0.23447487420618 0.237533696539434 0.223213077022841 0.224742300195266 0.232217864710661 0.240246235024978 0.222235814957612 0.226640994286200 0.228007315305608 0.225931088203615 0.220076414269238 0.221179617901937 0.240163034430681 0.225677953014249 0.229335575688456 5 5|0 +|/ 21399962 21400372 21400251.8 21399756 21400406 + gene protein_coding_gene TRUE TRUE AT5G52740.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.410868570869782 3.81631530469957 0.00306630075735626 1 4.52258987180469 7.20732208831966 0.410868570869782 0.118358778937195 AT5G13180_at 11.1179732309838 11.3901035450284 11.8953930085082 11.9816077441013 12.3370052335665 12.2471650408248 10.7706461724346 11.0725642472352 10.1856297404218 10.7792485193922 11.2784361077676 11.3780606264429 11.7914567930676 11.4858514673166 11.0365788982933 11.4923963034252 11.6508764070624 11.1504969006934 10.9219110376908 0.0792434742124701 0.0761862236838039 0.0769220374971564 0.0761862236838039 0.0789815403669025 0.0794255024260323 0.0768895572170182 0.0763731668889775 0.0858616643196994 0.0783455531335972 0.0761862236838039 0.0762223711406763 0.0762773456566685 0.0761862236838039 0.0769986181426629 0.0761862236838039 0.0808456100147475 0.0811778875798585 0.0785883066237372 5 0|5 /|+ 4196935 4197515 4197235.9 4196575 4197851 + gene protein_coding_gene TRUE TRUE AT5G13180.1 ANAC083 (Arabidopsis NAC domain containing protein 83); transcription factor similar to ANAC041 (Arabidopsis NAC domain containing protein 41), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33480.1); similar to unknown [Solanum lycopersicum] (GB:CAA99760.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.348533460866235 3.81624699071264 0.00306665509492497 1 4.52248808721225 22.6200317547571 0.348533460866235 0.0735662830847755 AT5G43010_at 8.42543363875615 8.57041652356177 9.62491391448147 9.56044631539084 9.68138398768864 9.38735991276345 8.58906023073 7.92437369716668 8.03830182042527 7.84258137787417 9.10172185148647 9.15732728898218 8.9498013088318 9.2293062698156 9.44335903768559 9.1585777711634 8.96160260688981 8.87571240355754 7.5750165795733 0.122676376955294 0.120767511908170 0.114676283012375 0.116112970784647 0.120143608217110 0.116613968681216 0.122518823151023 0.125885158075236 0.134748764511717 0.123901617563174 0.114676283012375 0.116981322721443 0.117330973367082 0.119946926784710 0.114850745768599 0.116013233052009 0.12262119918843 0.117605857516759 0.129602675874216 5 5 - 17265806 17266818 17266363.273 17265518 17268362 - gene protein_coding_gene TRUE TRUE AT5G43010.1 RPT4A (regulatory particle triple-A 4A); ATPase 26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA, similar to 26S proteasome regulatory complex subunit p42D, putative [Arabidopsis thaliana] (TAIR:AT1G45000.1); similar to 26S proteasome regulatory particle triple-A ATPase subunit4b [Oryza sativa (japonica cultivar-group)] (GB:BAB78495.1); similar to AAA ATPase; 26S proteasome subunit P45; Nucleic acid-binding, OB-fold [Medicago truncatula] (GB:ABE79655.1); similar to 26S proteasome AAA-ATPase subunit RPT4a [Solanum tuberosum] (GB:BAC23035.1); contains InterPro domain 26S proteasome subunit P45; (InterPro:IPR005937); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.425994574682919 3.80098837630489 0.00314687584642731 1 4.49973824286572 17.4345781908636 0.425994574682919 0.128740859370956 AT5G25340_at 2.60105844524241 2.53345259149944 2.31976319620596 2.73574681043273 2.42990565321549 2.76101473602742 2.35542853632879 2.56788950955484 3.64546437820103 2.76828792392289 2.83927218098694 3.02717681487808 2.63694016724564 2.93847085200797 3.13120911865669 2.7243467338125 2.92401896845137 3.45348692762720 2.74625765339214 0.205186260136203 0.207680037868326 0.209068851692266 0.219296128498634 0.207341591207356 0.206211343929796 0.210647925731688 0.2142457775026 0.212324959215046 0.209730421783076 0.208067788840256 0.218562670853869 0.210604338971745 0.218858532000585 0.211164497520710 0.205186260136203 0.214866348302557 0.219235411565751 0.209354509666339 5 5|0 +|/ 8793281 8794115 8793647 8793021 8794787 + gene protein_coding_gene TRUE TRUE AT5G25340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32270.1); similar to Ubiquitin [Medicago truncatula] (GB:ABE81772.1); contains domain no description (G3D.3.10.20.90); contains domain Ubiquitin-like (SSF54236) -0.381089486175296 -3.79986796427131 0.00315285157027077 1 4.4980665725715 5.54438337096188 -0.381089486175296 0.0997710504006035 AT5G63280_at 5.23995020900278 5.25707456154538 6.6612507739905 6.75421200962218 6.98313349104467 6.66175531201659 4.75998294016931 4.262420752851 4.35303887031354 3.96232141331435 4.84047325871431 4.89852977883074 4.83218500634286 5.06824257563162 4.69677744519294 5.31729987743786 5.28397265005779 5.15696869388499 4.32964804044702 0.2196556223625 0.221448368108293 0.221352024128066 0.219357669748005 0.215253760092668 0.219379392131646 0.213424067303469 0.215460258529004 0.222714163023057 0.215055193199357 0.211453478414205 0.211617064619878 0.211453478414205 0.213529405267680 0.214231528774105 0.211453478414205 0.214288029815951 0.217245014509038 0.211789459408608 5 5|0 +|/ 25385178 25385857 25385550.556 25384257 25386523 + gene protein_coding_gene TRUE TRUE AT5G63280.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G40710.1); similar to Os12g0233400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066450.1); similar to PREDICTED: similar to CG4133-PA [Tribolium castaneum] (GB:XP_969705.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.386681723754067 3.79750953999564 0.00316546878839128 1 4.49454724062239 10.4358769740069 0.386681723754067 0.103802090817725 AT5G60550_at 6.46609981756297 6.50214117053545 7.4651242913306 7.34506353827473 7.47251656318484 7.45913043404621 5.74907466860493 5.94221670424234 6.25123823884564 6.37477519405352 7.76135929791136 7.71229130960443 7.60437490105042 7.69247057050551 7.55435184543244 7.81857308076401 7.53912689142843 7.55606693283925 6.02773522245234 0.148392055653854 0.147420620388962 0.142554292608355 0.145369786820600 0.142479778006088 0.145225265628701 0.160234663632900 0.15307587252196 0.153970887775372 0.164147758089599 0.143186139965348 0.144704822131015 0.156952855394846 0.150015429379160 0.144051407714309 0.143225827757158 0.153106090885582 0.147889533578968 0.149414224383098 5 5 + 24358566 24359547 24359166.727 24356455 24359816 + gene protein_coding_gene TRUE TRUE AT5G60550.1 GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2); kinase similar to GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G45240.2); similar to Protein kinase [Medicago truncatula] (GB:ABE79890.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.315233618831593 3.79571807045404 0.00317508792431359 1 4.49187346059548 13.736542434544 0.315233618831593 0.0399139985696122 AT5G14860_at 2.26856518579162 2.49924104350453 2.45325030503390 2.49916425585168 1.90478803895249 2.26514641286976 2.42028986565711 2.477929670239 2.27141868549132 2.66332355709878 2.25009484989481 2.26981015571744 2.61298429686886 2.10301813891978 2.06780378522092 1.98038056623937 2.155870235517 2.67419317659218 2.12314619516178 0.190395771514787 0.196188799167610 0.189955280032056 0.187795776759799 0.190923655739940 0.195084305783922 0.189323711561374 0.201177058581694 0.191542832721579 0.193924293431685 0.192870676823586 0.187795776759799 0.193219796757355 0.188654625065239 0.187795776759799 0.188067179556802 0.197011331017831 0.190953937307193 0.201432765853979 5 5 + 4806751 4807714 4807290.182 4805890 4807762 + gene protein_coding_gene TRUE TRUE AT5G14860.1 transferase, transferring glycosyl groups similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G16890.2); similar to Os09g0329200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062897.1); similar to putative UDP-glucose glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD54417.1); similar to OSIGBa0144J05.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66194.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213); contains InterPro domain Tudor; (InterPro:IPR002999) -0.348470435187339 -3.79555267955773 0.00317597750539792 1 4.49162659272959 4.65699628717347 -0.348470435187339 0.075134417562827 AT5G63020_at 6.54941583367727 6.4882015784574 6.80559882987183 6.98563546585839 7.75800454409198 7.02233613857858 6.89396880039363 6.29514396136892 6.49872033733722 6.34708903602553 7.38896568040487 7.04017968824348 6.77874760175735 7.02107715868422 6.93762614569157 7.3129729566411 6.5378372794359 6.73105761630618 6.52831561172097 0.295914008588838 0.293130989627711 0.315901731957574 0.296208210912009 0.296494538444413 0.294635278296824 0.298843648417159 0.300473723983762 0.343322900314324 0.291775851947008 0.303569754527940 0.291775851947008 0.296433247643955 0.302237788911938 0.291775851947008 0.291775851947008 0.311661054012289 0.295175084015502 0.291775851947008 5 5 - 25300627 25301086 25300878.375 25300289 25303228 - gene protein_coding_gene TRUE TRUE AT5G63020.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g63020 (pNd11) [Arabidopsis Thaliana] (GB:Q8RXS5;GB:O04666;GB:Q9FM50); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63350.1); similar to RPS5 (RESISTANT TO P. SYRINGAE 5) [Arabidopsis thaliana] (TAIR:AT1G12220.1); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62353.1); similar to NBS-LRR type disease resistance protein [Poncirus trifoliata] (GB:AAN62351.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.493211579500764 -3.79488846959252 0.00317955267173426 1 4.49063513568226 13.5630879828323 -0.493211579500764 0.167421740186953 AT5G53450_at 9.94129569834904 10.0199112215080 10.4079059638280 10.3337448904651 12.0269395102426 11.9134853277857 10.3148475750934 10.2049486849927 10.7284294454749 11.6046422036492 11.8120963713761 12.2162144691740 12.630568665966 12.2843316570113 11.6397506391555 12.5798418726768 12.3718060192486 10.5567324106828 11.5826864058838 0.100377950150519 0.10105368242534 0.097637718851185 0.102788665899955 0.0941631548748144 0.0948771935144897 0.0953156610457974 0.100629853341373 0.106186894076667 0.0955139099058225 0.093577479978093 0.094685380476820 0.0961299039243693 0.0965192225057676 0.0969744985075393 0.093577479978093 0.100794245153490 0.103722731747701 0.093577479978093 5 5 + 21708874 21709348 21709098 21705989 21709677 + gene protein_coding_gene TRUE TRUE AT5G53450.1|AT5G53450.2|AT5G53450.3 ORG1 (OBP3-RESPONSIVE GENE 1); kinase similar to Proteinase inhibitor I4, serpin; Protein kinase [Medicago truncatula] (GB:ABE80838.1); similar to Os01g0655500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043752.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.310757868480657 3.79376407964737 0.00318561432539085 1 4.48895664478690 22.3037200831151 0.310757868480657 0.0331208194190436 AT5G45080_at 2.24061966984069 2.34117798970443 2.62095521837173 2.80513525456306 2.27257187529176 2.41081611740458 2.36267154645623 2.69296729336248 2.42984563029462 3.02614880657935 2.7189429376149 2.77225001806676 2.91874996003035 2.40158611701946 2.62023043312042 2.64379007921442 2.54822888355062 2.94370423246099 3.17552042763599 0.183784815234813 0.181836831866008 0.178977060889581 0.185772913227961 0.189664950548795 0.179887548250051 0.198796398811602 0.191135904396694 0.193252804283651 0.192435667744715 0.178789791571625 0.179673099649437 0.180495388882080 0.182289422559486 0.187854850767713 0.186951116566461 0.184470517870981 0.178789791571625 0.178789791571625 5 5|0 -|/ 18208802 18209692 18209125.4 18208802 18210434 - gene protein_coding_gene TRUE TRUE AT5G45080.1 ATPP2-A6 (Phloem protein 2-A6); transmembrane receptor similar to ATPP2-A8 (Phloem protein 2-A8), transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45070.1); similar to TIR; Disease resistance protein [Medicago truncatula] (GB:ABD28631.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) -0.344458854972047 -3.79350866909002 0.00318699293102124 1 4.48857534485673 5.2549178476934 -0.344458854972047 0.0718210239675677 AT5G47240_at 8.95564447433028 9.41748734917546 8.71474299085813 8.97043234999336 9.41883116226014 8.77844870309201 8.12188156970375 8.30768214887247 5.48821328252035 7.02480440409716 9.09132053243645 8.73775614288165 8.66059034295803 8.73569829442895 8.79222740564396 8.94340046979558 7.96382492047863 8.98894170151168 6.4519325636852 0.212119733163195 0.207102203446750 0.213689539237523 0.213928829573231 0.202019788841735 0.207149400268794 0.210033469711419 0.208372510809792 0.269108613845204 0.209442580093797 0.206809250961206 0.202019788841735 0.213827225180757 0.209863513083680 0.208740914473259 0.202019788841735 0.232071184463294 0.202306872686599 0.214949240231309 5 5|0 +|/ 19201835 19202658 19202323.1 19200828 19202871 + gene protein_coding_gene TRUE TRUE AT5G47240.1 ATNUDT8 (Arabidopsis thaliana Nudix hydrolase homolog 8); hydrolase Identical to Nudix hydrolase 8 (EC 3.6.1.-) (AtNUDT8) (NUDT8) [Arabidopsis Thaliana] (GB:Q8L7W2;GB:Q8LAJ0;GB:Q9LVT5); similar to ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2), ADP-ribose diphosphatase/ NAD binding / hydrolase [Arabidopsis thaliana] (TAIR:AT5G47650.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64957.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG; (InterPro:IPR003293) 0.456068301645282 3.78956731862121 0.00320834551632286 1 4.48269027751503 16.3660788733863 0.456068301645282 0.147176601193036 AT5G12170_at 5.76397224008822 5.73660417735869 7.12796759205182 6.7834511308435 6.77363749618904 6.61628952323621 5.62221915142404 5.65155698841648 5.10667986616909 5.19059111937139 6.45199078084394 7.14700718178332 7.11974635122479 6.74717323396707 6.46532167902899 7.28752061314694 7.07280286437877 7.10387232537797 5.60153637792432 0.139474126939436 0.136240783700122 0.143163652686136 0.141187323680547 0.139574331098004 0.145397885763365 0.139566086785478 0.138916993168167 0.15333959446233 0.148759173967825 0.137331315399788 0.135981308795459 0.141417255583828 0.145251633645228 0.141564585185879 0.139573883623701 0.139784066949280 0.142297639720832 0.142123977902605 5 5|0 +|/ 3931702 3934925 3933229.095 3931563 3935130 + gene protein_coding_gene TRUE TRUE AT5G12170.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19380.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE77682.1) 0.337595054837949 3.78930570846686 0.00320976805783064 1 4.4822995810327 12.3714782040546 0.337595054837949 0.0659108162039899 AT5G19070_at 5.64219543472651 5.8761236636895 6.63280464585868 6.70329848478275 7.82931942520727 7.37973785572076 5.82864052987275 5.25884646939343 4.10760665673989 4.00329298522124 5.45103544232128 5.24138920945225 4.96979603242533 5.68287894444892 5.28130600584193 5.82572221710269 5.71698909066099 5.20400662204265 4.0833488212924 0.287137642837746 0.283863179849447 0.285998859562514 0.279383493198007 0.279383493198007 0.28548277373152 0.283415873806391 0.28460564917137 0.306099649740292 0.28108194726961 0.279383493198007 0.281431843188882 0.283752473508555 0.279383493198007 0.279383493198007 0.279383493198007 0.294602077641997 0.280006330035382 0.287387350126566 5 5|0 +|/ 6376383 6377364 6376791 6375247 6377662 + gene protein_coding_gene TRUE TRUE AT5G19070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03260.1); similar to hypothetical protein Tery_1993 [Trichodesmium erythraeum IMS101] (GB:YP_721717.1); similar to Os07g0655900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060500.1) 0.430639336268815 3.78645393704905 0.00322531751173482 1 4.47804009030744 11.1370657803005 0.430639336268815 0.132528766050291 AT5G47620_at 7.878816827554 8.36551812496245 8.97008385167469 8.99218083643374 8.87331327290686 8.90189734867667 8.59078574146504 8.75627924131957 8.66923360778588 9.03861144269344 9.0399124827581 9.30408115416616 9.25283763082655 9.28833941204588 8.87309255568848 9.1584354391716 9.22548591259458 8.93270949668545 8.70159824854655 0.134058052659497 0.129230237088438 0.132144284439049 0.125879856488994 0.120745164774192 0.122394359515375 0.125169204100250 0.130126031502451 0.132758674538643 0.123496877822874 0.125319190405193 0.124689316035340 0.122256518137249 0.126469585055600 0.132441828957536 0.119793018565388 0.131569968843768 0.122057196054059 0.124008372082160 5 5 - 19319922 19320422 19320149.909 19319496 19321963 - gene protein_coding_gene TRUE TRUE AT5G47620.1|AT5G47620.2|AT5G47620.3 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G07810.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64922.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64996.1); similar to hypothetical protein 25.t00002 [Brassica oleracea] (GB:ABD64965.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G07810.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64996.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.365091228955853 -3.78547735679203 0.00323066033569433 1 4.47658120140519 17.6348641690412 -0.365091228955853 0.0891813628091162 AT5G45610_at 6.1206375880019 5.94277666243523 7.48659102537459 6.90964482222144 7.80719939863144 7.45793393564536 6.12181026207381 5.70824739402511 4.14144540004206 5.19044922321044 6.12247790655025 6.11831212743096 6.47231700397601 6.41508370569205 6.06225278015593 6.36769750885361 7.3139604421276 5.94651770890844 5.15733275279661 0.190974145201191 0.190030532719516 0.189431274911259 0.189803325921973 0.189661354202651 0.189947823689825 0.186447795698313 0.186000272033833 0.196687698101390 0.199446849654867 0.187677455643648 0.188709494235364 0.1896004755324 0.189843753967949 0.195029450553051 0.187932405660101 0.190369846623673 0.192494783657574 0.200041034928334 5 5 - 18513665 18514349 18513978.091 18513538 18516900 - gene protein_coding_gene TRUE TRUE AT5G45610.1 binding contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.443684005976355 3.78524125921667 0.00323195339313415 1 4.47622848279577 12.2853900643736 0.443684005976355 0.140326103236817 AT5G18250_at 5.61821388759416 5.61362239243943 6.79627270903021 6.92928140782017 6.91180731383697 6.5575284174546 5.67369416018103 5.77373138613487 3.45475743412822 3.7816239152776 5.17768228333908 4.88006946667928 5.8321961150528 5.30868049491723 5.25714170250176 5.45644695322107 5.71571226421184 5.0074263599213 4.25766045994633 0.235628563948214 0.234231157381629 0.243124674237458 0.233831757430249 0.239896562227000 0.235531788948426 0.239725584298546 0.231464596156595 0.241930397694903 0.235192722973397 0.247166661926246 0.239866357216499 0.244673968893529 0.245984352538529 0.237585491540235 0.234805753207565 0.233759514545289 0.241537752265687 0.232818803481792 5 5|0 +|/ 6033800 6035194 6034595.375 6033704 6035382 + gene protein_coding_gene TRUE TRUE AT5G18250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04040.1); similar to Os01g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042664.1); similar to gb protein [Sorghum bicolor] (GB:AAL68853.1) 0.338967601446169 3.78272478170343 0.00324576905274405 1 4.47246854142818 10.8146523216937 0.338967601446169 0.0677423092185027 AT5G52770_at 2.14763079246536 2.08341009874550 2.67576603552944 2.57987995909341 2.53006679854743 2.70767057329732 1.66740389197649 1.80267883601929 1.93763625826687 2.23322583048080 1.96267060452627 2.15595129487620 2.40524980248045 2.14674012044084 2.25678882865430 1.91358867812041 2.31916763493722 2.23862580429594 1.37723799020612 0.178885304079368 0.178030691466094 0.180216395848119 0.188328474995128 0.18128585384189 0.177595725544963 0.173680989194730 0.173857241583694 0.190435933237906 0.182643223399023 0.176751101864436 0.17935395878543 0.173680989194730 0.175928335534736 0.173680989194730 0.176184555452492 0.177158075222393 0.183280718177132 0.180465435773453 5 5|0 +|/ 21407003 21407377 21407205.9 21406992 21407415 + gene protein_coding_gene TRUE TRUE AT5G52770.1 heavy-metal-associated protein-related similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52750.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.316617509379429 3.78158138587813 0.00325206663177074 1 4.47075989348418 4.2864206427223 0.316617509379429 0.0434917903275687 AT5G08630_at 5.83994455106901 5.3756572164296 6.1770257004029 5.56525596299701 4.70703443576384 5.45556354225529 4.4911039462477 4.52657153800171 4.82969511712601 4.8086765817673 5.8714314129968 5.4368889237156 5.27823729812622 5.51779471194621 5.39841936559012 5.19876441817657 5.46823452942013 4.50331709604194 5.06313638518539 0.227543889104853 0.226820252624439 0.226572962290394 0.225564417386998 0.230749841947403 0.230668874196151 0.225124959173039 0.227243338527933 0.22907845814575 0.225776394448494 0.230215094691576 0.232949336995431 0.235997919078807 0.236097997114761 0.231850355444776 0.225124959173039 0.231896586259818 0.241104254658512 0.226715244814009 5 0|5 /|- 2798686 2799184 2799018.857 2798338 2803172 - gene protein_coding_gene TRUE TRUE AT5G08630.1 DDT domain-containing protein similar to peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein [Arabidopsis thaliana] (TAIR:AT5G35210.2); similar to DDT [Medicago truncatula] (GB:ABE83680.1); contains InterPro domain WSTF/Acf1/Cbp146; (InterPro:IPR013136); contains InterPro domain DDT; (InterPro:IPR004022) -0.52563836310449 -3.78065250103017 0.00325719206892034 1 4.46937167985875 10.3845889437432 -0.52563836310449 0.185691663194400 AT5G01200_at 2.07843324034258 1.93782841205321 2.11980905539999 2.33571912784083 2.58974095011639 2.01459512438646 1.71091424697612 1.66789812529982 1.18605494321300 0.919173769902084 1.88052135796261 1.91555287503296 1.53423380239038 1.75969490281527 2.10095305159936 2.03048713581359 1.31612883206911 2.00381554414201 1.41708880599918 0.233568107753116 0.230498913109771 0.230707280907323 0.227535946357234 0.241234529322007 0.232359398688176 0.225394259653074 0.227124067713111 0.236156779452065 0.231580177128447 0.224884469732012 0.224884469732012 0.229736846738703 0.224884469732012 0.227460114363883 0.227284002653758 0.227070815123930 0.225569766006982 0.224884469732012 5 5|0 +|/ 77350 78247 77874.1 77115 78542 + gene protein_coding_gene TRUE TRUE AT5G01200.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G38090.1); similar to MYB transcription factor [Hevea brasiliensis] (GB:AAU06309.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.393117416135548 3.78056282756937 0.00325768731634436 1 4.46923765750623 3.55275692401838 0.393117416135548 0.109316589451221 AT5G01740_at 1.95262937585457 2.15954503769244 2.21849913871636 2.28251059146101 1.66039349090766 1.83400894451499 2.2886420877321 1.95562848067404 2.56958007381857 2.07092189360794 3.96124620165114 3.66102920062514 4.44401900434624 3.72275634905739 3.15116666261583 4.72560499306653 3.03123534575746 4.3572817316254 2.80140940002749 0.244265222549171 0.250289346946959 0.237428237853407 0.237428237853407 0.237428237853407 0.243367775398238 0.247802877852636 0.241138392580903 0.240884248912215 0.237428237853407 0.241755075761723 0.246230333645069 0.245591028224988 0.242736108191743 0.249394022748923 0.250664674967011 0.243405183151191 0.253200529346473 0.237794803535503 5 5 + 280878 281247 281054.273 280719 281442 + gene protein_coding_gene TRUE TRUE AT5G01740.1 similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G10985.1); similar to Wound-induced protein WI12, putative [Medicago truncatula] (GB:ABE88200.1); contains InterPro domain Wound-induced WI12; (InterPro:IPR009798) 0.34684983058821 3.77929211999166 0.00326471357249114 1 4.46733839878481 5.22519692273305 0.34684983058821 0.0750251237824893 AT5G10400_at 5.45769124991026 5.98400626824468 6.99084292975531 7.06067672429742 5.33225669545486 5.66463718995359 5.89767673972702 5.86435401622568 5.46852605459917 6.1823669719049 6.92516983587648 7.38586291020446 6.16833199421107 6.58851633044292 7.49708361634682 6.84652060490815 6.45032789279671 6.04513424350383 6.0536579479509 0.183216966435624 0.179681021342460 0.184478800805671 0.185358208228689 0.190717071694152 0.188748082784542 0.185475157569067 0.187461688963211 0.199997562785693 0.186545078349614 0.184929675311456 0.184094460499941 0.17736715232072 0.182603412140767 0.195780502279543 0.180633934112683 0.186281629697035 0.178436760582631 0.179770184435539 5 5 - 3270544 3270848 3270713.636 3270290 3270953 - gene protein_coding_gene TRUE TRUE AT5G10400.1 histone H3 Identical to Histone H3.2 (Histone H3.1) (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.391224910015316 -3.77335960517867 0.00329772563060378 1 4.45846866595483 12.3514604367068 -0.391224910015316 0.108552523357871 AT5G43060_at 6.25580750306389 6.46565815880151 6.29490933578074 6.87791021150542 7.77209400707767 6.88218690433262 4.64668294806045 4.66660153516007 5.25198884390889 4.16830475373398 6.05614276498615 6.09004542393882 5.62346695347886 5.80424794621624 6.58173494271364 6.19670635670095 6.58134667194705 6.66534983641615 4.27744456658629 0.214137470004786 0.210318630935622 0.213442234867085 0.215469291076267 0.216797118012862 0.216075763166351 0.215956016691789 0.210318630935622 0.226777420633551 0.217745467168280 0.215817246886594 0.211903250494401 0.222058922385464 0.222032703416198 0.210318630935622 0.21538630541763 0.218154210712796 0.215535821646300 0.216976104560296 5 5|0 -|/ 17287033 17287769 17287381.5 17286735 17289392 - gene protein_coding_gene TRUE TRUE AT5G43060.1 cysteine proteinase, putative / thiol protease, putative similar to cysteine proteinase (RD21A) / thiol protease [Arabidopsis thaliana] (TAIR:AT1G47128.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60579.1); similar to cysteine protease [Hevea brasiliensis] (GB:ABG33750.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60580.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Granulin; (InterPro:IPR000118) 0.527885056545406 3.76944719539947 0.00331968606318415 1 4.4526167572814 11.6156277422025 0.527885056545406 0.187687234883195 AT5G32440_at 9.08952196812064 9.29673846552577 10.0452200913737 10.1206580257522 10.2711491274797 10.2073040706999 8.69958368128868 8.99008331570557 8.83053102765699 8.7014660943099 9.91202437782576 9.67406057339531 9.86337672081887 9.67477562718767 9.64854820291256 9.82492154928212 9.71880158967695 9.76394191611726 8.83762451505504 0.134186248445237 0.133351585843395 0.132291100391615 0.133984221269977 0.134973428126072 0.134866868963022 0.133352584834041 0.136251208695819 0.16272465793855 0.146722031270953 0.140254133239238 0.136665206111816 0.133624814731812 0.130002545880109 0.136721099811161 0.137144376237329 0.142187805777852 0.132821810676821 0.144209807809969 5 5 + 12094729 12095544 12095074.636 12094126 12095789 + gene protein_coding_gene TRUE TRUE AT5G32440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80040.1); similar to Os06g0642900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058174.1); similar to Ubiquitin system component Cue; UBA-like [Medicago truncatula] (GB:ABE77893.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin system component Cue; (InterPro:IPR003892) 0.332750628924305 3.75632580357581 0.00339445127126975 1 4.43297658838556 18.8649974425729 0.332750628924305 0.0640759956828349 AT5G09330_at 8.07178467012405 8.03486303004505 9.39417420946328 9.14571583470821 9.13769215391201 8.77668226128758 7.35100343151863 7.31645828562319 7.57359049343467 7.19881462877785 8.5381696296344 8.58296226132321 8.83470888357267 8.33478065144328 8.33291182360668 8.76554250311288 8.25005566310662 8.25048380157914 7.54589535267053 0.167297761352963 0.167297761352963 0.188785463411604 0.17703730857638 0.172399576567795 0.183321388121693 0.177380556319535 0.17577994851401 0.203167681947619 0.184258109069301 0.167297761352963 0.169926132564891 0.167297761352963 0.172653543468769 0.169496220714051 0.171017280884957 0.177326899262784 0.187789429465172 0.183102676114051 5 5 - 2892637 2893191 2892920.273 2892366 2895423 - gene protein_coding_gene TRUE TRUE AT5G09330.1|AT5G09330.2|AT5G09330.3 ANAC082 (Arabidopsis NAC domain containing protein 82); transcription factor|ANAC082 (Arabidopsis NAC domain containing protein 82) similar to ANAC103 (Arabidopsis NAC domain containing protein 103), transcription factor [Arabidopsis thaliana] (TAIR:AT5G64060.1); similar to NAC1 [Medicago truncatula] (GB:AAF68626.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.345739898203952 3.75043788900262 0.00342856626807448 1 4.42415650066822 16.3663644314853 0.345739898203952 0.0763436452525448 AT5G42660_at 4.95394506505637 5.39439034845027 5.53948289331532 5.66217260518459 6.06295158104516 5.38051596787914 5.24160743495762 5.30420003078176 5.08859069817454 4.97766844119336 5.33234530321161 5.35760066929172 5.46219671312744 5.44542327677632 5.11864255211797 5.45420372807596 4.79243416751459 5.5593671336078 4.11720058290684 0.215831840932972 0.203043773644942 0.20626032395588 0.199706555824184 0.206687327637106 0.208201655106977 0.203463110572718 0.198904145093222 0.213665870602136 0.202889975842807 0.201222574073891 0.209698343843197 0.204929027206531 0.210118272778082 0.205890731182497 0.206747873184022 0.210582133658866 0.206160625965744 0.204787825980337 5 5 - 17121255 17121968 17121700 17120152 17123194 - gene protein_coding_gene TRUE TRUE AT5G42660.1 similar to hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Arabidopsis thaliana] (TAIR:AT2G02910.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56045.1); contains InterPro domain Protein of unknown function DUF616; (InterPro:IPR006852) -0.443316324992776 -3.74955756619073 0.00343369740605851 1 4.42283740616344 10.4639565410289 -0.443316324992776 0.142566063274421 AT5G35980_at 9.08901133096157 9.16945906543653 10.0098688349561 9.98782290386462 10.2632453745370 9.9376799673515 9.0484483970552 8.95168355622624 8.46779818586492 8.69871926732594 9.7319666531978 9.66519610878253 9.80876314188023 9.73843822751054 9.44116672744152 9.71791852367648 9.68902302342657 9.637295310864 8.45004385336536 0.087766534030886 0.0879664574410775 0.0902338700251683 0.0888749936959912 0.0880251818800049 0.092301985309889 0.0871996357264994 0.0914793557276975 0.0974321769961902 0.0949726460088737 0.0876821959168726 0.0875522857077009 0.0871322537122356 0.0889339921991159 0.088067598300915 0.0872165219007717 0.0896527562991181 0.0905931280259325 0.0986590505668008 5 5|0 +|/ 14150985 14153154 14151962.286 14145214 14153554 + gene protein_coding_gene TRUE TRUE AT5G35980.1|AT5G35980.2 protein kinase family protein|kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G40120.1); similar to Os02g0702500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047851.1); similar to hypothetical protein SPAC823.03 [Schizosaccharomyces pombe 972h-] (GB:NP_593830.1); similar to Os04g0602800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053776.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.328201941945321 3.74512725628435 0.00345964154477068 1 4.41619746966037 18.6659397955234 0.328201941945321 0.0605231638919824 AT5G53400_at 7.3002942925846 7.4249332712946 8.42509541456648 8.34912249677198 8.3176885463072 8.01194136593783 7.06817178113088 6.4417050043144 5.18713038727451 5.18848710841962 6.97663726540222 7.05841989376537 7.22259690186686 6.27096286375786 7.04834121152073 6.5938310458257 7.41120623159067 6.60209993740235 5.27305939035393 0.199819177895781 0.197288083827731 0.197867362287723 0.197288083827731 0.200308684119104 0.197288083827731 0.199449476742953 0.206454643294717 0.205997024774555 0.197342403407844 0.199033190483775 0.197288083827731 0.204897202728870 0.198230685052535 0.203711343562896 0.199223606654805 0.207110375725719 0.201690939609734 0.204778533871655 5 0|5 /|+ 21679764 21680402 21680019.75 21678671 21680798 + gene protein_coding_gene TRUE TRUE AT5G53400.1 nuclear movement family protein similar to nuclear movement family protein [Arabidopsis thaliana] (TAIR:AT4G27890.1); similar to salt tolerance protein 5-like protein [Solanum tuberosum] (GB:ABB16978.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain CS; (InterPro:IPR007052) 0.410740452268158 3.74363219948891 0.00346844249706106 1 4.41395619922124 13.7244877954006 0.410740452268158 0.123251946825007 AT5G36890_at 7.06936032415036 7.23346624266506 7.46952537595731 7.22348930788416 7.7848504643307 7.4258142149193 5.64880061387908 5.00631428011493 5.01770089271919 5.52878240587388 6.56622271132417 7.07448151928983 6.9680916514676 7.06275112483132 7.09769202487438 6.28943871480868 7.21919975648584 6.83250017289775 4.9512993501784 0.214305707784529 0.217342646115832 0.220165441412761 0.220035921362333 0.224519367321826 0.215858983514936 0.229849959102836 0.221320847699713 0.21850499416795 0.236167470060626 0.213348587633868 0.217357808863089 0.213348587633868 0.218197622284249 0.217372065251388 0.217553104106769 0.224791604702007 0.213497269357584 0.230193130655283 5 5|0 -|/ 14559446 14560421 14559950 14558580 14563460 - gene protein_coding_gene TRUE TRUE AT5G36890.1|AT5G36890.2 glycosyl hydrolase family 1 protein|hydrolase, hydrolyzing O-glycosyl compounds similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G26560.1); similar to latex cyanogenic beta glucosidase [Hevea brasiliensis] (GB:AAP51059.1); similar to Os01g0897600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045089.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.433405998441028 3.74153599451831 0.00348082135149731 1 4.41081326801872 12.8850649825316 0.433405998441028 0.137266302278446 AT5G64340_at 5.36664580385343 5.45631593710182 6.37075227200728 5.83457961542959 7.62719990656109 6.6130423998983 5.48326835581335 5.27996663340618 4.20514791068294 4.6580581537468 6.49535199525526 7.08977690160295 6.39231716542342 6.61176498672375 6.87382048268742 6.77993129180982 6.0736508384927 6.32088515211962 5.12963568280481 0.209696033917202 0.209696033917202 0.218539655769498 0.220234428887382 0.214285265991498 0.223369693138056 0.213381493476429 0.220567437949143 0.240535895108649 0.216474169952235 0.228528720421977 0.209696033917202 0.217222907055675 0.215136575641497 0.219588211454467 0.214248736729737 0.239631240208357 0.220779392621102 0.211454657725683 5 5 - 25748188 25748571 25748362.727 25747561 25750539 - gene protein_coding_gene TRUE TRUE AT5G64340.1 SAC51 (SUPPRESSOR OF ACAULIS 51); transcription factor/ transcription regulator Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation. similar to transcription factor/ transcription regulator [Arabidopsis thaliana] (TAIR:AT5G09460.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 0.551506560925991 3.73929924099227 0.00349408074023877 1 4.40745900573173 11.6259553325968 0.551506560925991 0.202212644783660 AT5G20170_at 6.502888992477 6.64781470675042 7.47375382620078 7.56730018166264 7.77789196655623 7.52603621814579 6.35613682840627 7.01259101101972 7.1688809781512 6.42815719270102 6.91483115145858 7.21302825301244 7.18696807541135 7.15689468165784 6.97034289707269 7.23087210681082 6.66392333137745 6.98850575508986 6.6809656729883 0.201237219278468 0.194956929955473 0.204995695930708 0.196965446741823 0.197155698991361 0.201156402575629 0.202035387493162 0.193828315306458 0.200491007465436 0.208902590649442 0.193828315306458 0.204016397901576 0.196112953698627 0.198826851630905 0.198065816481269 0.195962416201173 0.217979590707042 0.199610092731394 0.198659125284655 5 5|0 -|/ 6807569 6808201 6807881.8 6807483 6810800 - gene protein_coding_gene TRUE TRUE AT5G20170.1 similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86508.1) -0.413450640001358 -3.73879197335587 0.00349709508358038 1 4.40669821498669 14.0080544144523 -0.413450640001358 0.125284620176807 AT5G17030_at 3.14782163749463 3.02519463159878 3.48850585479011 3.41449699584043 2.70879437626290 3.44832952537339 3.25399614967101 3.28393565876365 2.94316578621446 3.59491465907304 3.49346937109863 3.28123242608789 3.28375986992413 2.91523205823225 3.48227143777049 3.2933811703471 3.73677808939244 3.62643187362158 3.29549782781892 0.175891569557393 0.175926040594884 0.178067004567940 0.186170723623825 0.177997126613970 0.183819737926986 0.18158829246802 0.183682356569153 0.185570449826923 0.181360217448646 0.183880105599059 0.174898666809742 0.184609477429028 0.186345814357277 0.182833782984321 0.178621684032137 0.187731668710887 0.178651546427824 0.187663839057075 5 5 - 5603212 5603768 5603557.182 5603136 5604741 - gene protein_coding_gene TRUE TRUE AT5G17030.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17040.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17050.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:BAB41020.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.421731611335986 -3.73795352337793 0.00350208333036519 1 4.40544065324602 6.55484883443842 -0.421731611335986 0.130461101369165 AT5G64950_at 3.32124068066169 3.2334982162424 4.52011735479571 4.33705001492802 4.27916257096007 4.38038692489389 2.90995220347068 3.00739582557586 3.10745602025342 3.08904652016348 3.59119781085928 3.71277263212449 3.46713242781019 3.66113994820189 3.46031368964624 3.6179611897053 4.19061946019578 3.40832416922920 2.95686455600924 0.225393543759276 0.223896381537185 0.221009345757591 0.224370135935142 0.220558738709614 0.219345543344682 0.233516332671986 0.223008748297359 0.226768509874703 0.227914273348546 0.226932994509287 0.219345543344682 0.227554560531027 0.228444850667043 0.219675213498954 0.220326587338222 0.225484630636957 0.227825819491529 0.226870768954877 5 5 + 25971761 25972228 25971962.364 25971070 25972386 + gene protein_coding_gene TRUE TRUE AT5G64950.1 mitochondrial transcription termination factor-related / mTERF-related similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G21150.1); similar to mitochondrial transcription termination factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37286.1); similar to Os06g0225100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057194.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.312223066557887 3.73575879633849 0.00351517553460695 1 4.40214844784665 7.0935029896645 0.312223066557887 0.0427252375142513 AT5G25120_at 6.85892505607016 6.84166274996825 8.10532049940577 8.14397094861856 8.09435949148797 7.39518763218913 7.53032545179166 7.33154716226047 6.85683616994498 6.99402040133781 6.99011439079088 6.51088064627553 7.66848334128553 7.69685705803682 6.5077582486675 7.75389806437913 7.99828743009162 7.25034278775563 6.88274591364535 0.192678640058165 0.168211960158069 0.178254847688287 0.193447072104376 0.171960287200560 0.184163963987612 0.170576225546021 0.172539267947345 0.189672620423877 0.171409024593220 0.186062591660328 0.178149017966715 0.174869105956839 0.168211960158069 0.172683439090113 0.170407534139542 0.179457633036848 0.173684061756712 0.179873613804411 5 5 + 8664183 8664326 8664241.818 8662102 8664536 + gene protein_coding_gene TRUE TRUE AT5G25120.1 CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B11 (EC 1.14.-.-) (CYP71B11) [Arabidopsis Thaliana] (GB:P58049;GB:Q67Y45); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25130.1); similar to CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25140.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.414244132798634 -3.73555804935038 0.00351637558137360 1 4.4018472871795 14.6418016610838 -0.414244132798634 0.126003041558625 AT5G67110_at 1.29566769726802 1.31395100250805 1.97880896470039 1.89797464022833 2.06353027931516 2.20577183651491 1.83294998051765 1.45316483922155 0.735428593981109 1.78474797592319 1.82525232404692 2.07272071325949 1.54724489859383 2.01987215773111 1.76495712791903 1.37815244104988 1.89604894217491 2.01724264189395 1.82727252717445 0.232778017745505 0.224766223026955 0.233749021532198 0.240853209815454 0.22715050294836 0.229571613153333 0.224140862991133 0.221521203132548 0.240064207279950 0.223343753125399 0.223456879889122 0.227630110106140 0.232485652956743 0.224001513723777 0.229846671170845 0.224150362553529 0.230653961926925 0.229922877803030 0.223277998107868 5 5|0 -|/ 26802568 26803422 26802980.875 26802332 26803609 - gene protein_coding_gene TRUE TRUE AT5G67110.1|AT5G67110.2|AT5G67110.3 ALC (ALCATRAZ); DNA binding / transcription factor|ALC (ALCATRAZ) encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. similar to SPT (SPATULA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G36930.1); similar to basic helix-loop-helix protein [Fragaria x ananassa] (GB:AAV33474.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.338511681485588 3.73032648069819 0.00354779966630691 1 4.39399713632884 3.38739545746420 0.338511681485588 0.0716324828149084 AT5G14720_at 7.60363122793656 7.91918961721168 8.79913491828622 8.61550364862423 9.63697260456045 8.9437567398521 8.19815502428543 7.77445341186361 7.34157187036926 6.93215372309764 8.65687218455452 8.68480553781613 8.80711732647785 8.4795414570654 8.52337145063465 8.6593947005535 8.43661352824894 8.56689275202762 6.75721367440731 0.207406341998230 0.202706096664223 0.198251204238178 0.216425082515142 0.194810484853644 0.205531092884558 0.191245443401374 0.205922357112642 0.216048196433956 0.202875583406673 0.202674969099023 0.191114059685339 0.195253712314943 0.203157114304059 0.204046463661118 0.191114059685339 0.212695927326276 0.202947668995317 0.197356514204353 5 5|0 -|/ 4749412 4750362 4750011.222 4747863 4753595 - gene protein_coding_gene TRUE TRUE AT5G14720.1 protein kinase family protein similar to kinase [Arabidopsis thaliana] (TAIR:AT1G79640.1); similar to Os06g0486400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057665.1); similar to putative MAP4K alpha1 [Oryza sativa (japonica cultivar-group)] (GB:BAD19174.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.460603474979969 3.72654054881282 0.00357072184924511 1 4.38831411581575 16.2424192523094 0.460603474979969 0.154141959431676 AT5G58960_at 6.54082137480126 6.95112555283193 6.69743013293532 6.69044954865911 8.08528013595574 7.92780414606586 6.43198691537452 6.43637856051634 4.97845600979221 6.15897097859765 7.66627172649862 8.28420425275442 7.55079578879562 7.57604707337702 8.03362499384009 8.06752755269079 7.38990650194034 7.65004449274016 6.18632957789463 0.237496396860927 0.2285747726361 0.23161161877284 0.2285747726361 0.2285747726361 0.235671727305091 0.234589378917276 0.235881487138504 0.243849465410136 0.236051739863398 0.2285747726361 0.2285747726361 0.229244791887187 0.235304863713308 0.230255600974853 0.2285747726361 0.251692335227236 0.231914395329792 0.23591171752701 5 5 + 23825016 23825472 23825270.727 23822943 23825704 + gene protein_coding_gene TRUE TRUE AT5G58960.1|AT5G58960.2|AT5G58960.3 GIL1 (GRAVITROPIC IN THE LIGHT) Mutant plants display impaired light-regulation of the hypocotyl randomization response. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45260.1); similar to hypothetical protein [Oryza sativa] (GB:AAK82451.1); contains InterPro domain Protein of unknown function DUF641, plant; (InterPro:IPR006943)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45260.1); similar to hypothetical protein [Oryza sativa] (GB:AAK82451.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Protein of unknown function DUF641, plant; (InterPro:IPR006943) 0.343120268840626 3.72549723129410 0.0035770656347747 1 4.38674769461088 13.7461037058547 0.343120268840626 0.0760685433363201 AT5G48910_at 5.8236200658919 6.3688393407018 6.54770091217625 6.77013848704976 6.85990302379434 6.8101506382388 6.14941996488808 6.5815847746732 6.03345083875691 6.32355897837806 7.01156392890871 7.3500580131003 6.81023533014915 7.071335129139 6.89583199797065 7.38171498012951 7.03874865812347 6.88424761329855 6.56814704994602 0.159059668994224 0.159920452902972 0.166245211729488 0.168916310728208 0.163914005032371 0.168507028787760 0.171366701238449 0.163721051526545 0.178321156392895 0.163738008680441 0.163138742754101 0.165742181196673 0.167055557295902 0.162648355984726 0.16463191033506 0.162480217047091 0.178088746416086 0.170169320794106 0.168414958134730 5 5 - 19850203 19850727 19850478.909 19850098 19852160 - gene protein_coding_gene TRUE TRUE AT5G48910.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to Os03g0821700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051728.1); similar to putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16484.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.41416510306151 -3.72484796688798 0.0035810193176897 1 4.38577283155581 13.1708459402831 -0.41416510306151 0.126694955716997 AT5G57140_at 3.58362505776576 2.80283554794936 4.10532532940678 3.90978103089012 4.58265753019782 4.27319267554638 3.24038618526336 2.82943518941467 2.10446737716265 2.70544714991827 3.22853488282300 3.36769652169963 3.71890340475582 3.47981730094405 2.96461637602534 3.37767881267234 3.72952069113540 3.14596932509793 2.5922364320156 0.225582363366507 0.221864332042982 0.218820804348974 0.225384620356202 0.231331007455876 0.228192746353699 0.220466286012312 0.223420642505574 0.224095624687644 0.235431628353992 0.217907583894313 0.219243078499793 0.219458396473043 0.222316234834235 0.228596958266114 0.218997791465838 0.220231837947330 0.227678377932082 0.218221663435726 5 5 + 23167915 23168567 23168198.636 23167106 23168596 + gene protein_coding_gene TRUE TRUE AT5G57140.1 ATPAP28/PAP28 (purple acid phosphatase 28); acid phosphatase/ protein serine/threonine phosphatase similar to ATPAP29/PAP29 (purple acid phosphatase 29), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G63140.1); similar to Os06g0699200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058469.1); similar to calcineurin-like phosphoesterase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53995.1); contains InterPro domain Phosphoesterase At2g46880; (InterPro:IPR011230); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.479999913569927 3.72259337973602 0.00359478379763672 1 4.38238719454831 6.58789272701746 0.479999913569927 0.165311960920786 AT5G25370_at 3.05245124964970 3.45458183198652 3.22659550950595 3.34704429854919 2.83142562104597 3.51365958068754 3.2547780017316 3.46954598827452 3.54683423251088 3.19997246826862 3.55667151282286 4.2047266964784 3.51814545711401 3.75875432428662 4.02189429504996 4.1949527189566 3.42025245802941 3.76314957796756 3.61029892826708 0.180800463729086 0.179688799658392 0.181828359954919 0.177966582986744 0.179698976546964 0.180345133330148 0.185093997551353 0.182490947015427 0.174848049892992 0.180175049846513 0.179736475644967 0.183223209714821 0.177248406340059 0.177029198495297 0.186451091269555 0.176557751085240 0.18651246518777 0.181900450269676 0.183442811204308 5 5 - 8804254 8805136 8804641.273 8804243 8807550 - gene protein_coding_gene TRUE TRUE AT5G25370.1 PLDALPHA3 (PHOSPHLIPASE D ALPHA 3); phospholipase D member of C2-PLD subfamily. Analyses on the gene structures/sequences, overall amino acid sequences, and domain structures indicate that PLDalpha3 is most closely related to other two PLDalphas than to other PLDs. Phylogenetic analysis has not identified a true ortholog for PLDalpha3. Identical to Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta) (PLDZETA) [Arabidopsis Thaliana] (GB:P58766); similar to PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1), phospholipase D [Arabidopsis thaliana] (TAIR:AT3G15730.1); similar to PLDBETA1 (PHOSPHOLIPASE D BETA 1), phospholipase D [Arabidopsis thaliana] (TAIR:AT2G42010.1); similar to PLDALPHA2 (PHOSPHLIPASE D ALPHA 2), phospholipase D [Arabidopsis thaliana] (TAIR:AT1G52570.1); similar to phospholipase D [Lycopersicon esculentum] (GB:AAG48162.1); similar to C2; Peptidase, cysteine peptidase active site [Medicago truncatula] (GB:ABE92923.1); similar to C2; Peptidase, cysteine peptidase active site [Medicago truncatula] (GB:ABD28731.1); contains InterPro domain YLP motif; (InterPro:IPR004019); contains InterPro domain Phospholipase D, plant; (InterPro:IPR011402); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phospholipase D/Transphosphatidylase; (InterPro:IPR001736); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.441654660978983 -3.72180663198921 0.00359959987023045 1 4.3812056160117 6.89735372173073 -0.441654660978983 0.143519124989451 AT5G19350_at 9.24239829604803 9.21613495311304 10.1490095566556 9.96995248727264 10.2211544003738 10.0101088870863 9.24969977006885 9.10836205320027 9.02592422425978 9.38681105186403 9.24989905983708 8.9049355542828 9.30781975438635 9.2390007078487 8.7553212960472 9.46328647615017 9.55599214386532 8.95800069244996 9.35135243835538 0.107817910744124 0.106920180908228 0.108675485133849 0.108390221457208 0.109841266957614 0.107514476827370 0.110169418487538 0.110229600353686 0.115333304139216 0.113623383348783 0.113392638150615 0.114642400289526 0.112607531872415 0.11659603904472 0.118294866689483 0.108085829012837 0.114351752685907 0.117977419319385 0.113628948315578 5 0|5 /|+ 6520655 6521267 6521053.875 6518840 6521476 + gene protein_coding_gene TRUE TRUE AT5G19350.1|AT5G19350.2 RNA-binding protein 45 (RBP45), putative similar to ATRBP45B, RNA binding [Arabidopsis thaliana] (TAIR:AT1G11650.2); similar to RNA-binding re (GB:ABE90872.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to ATRBP45A (RNA-BINDING PROTEIN 45A), RNA binding [Arabidopsis thaliana] (TAIR:AT5G54900.1); similar to ATRBP45B, RNA binding [Arabidopsis thaliana] (TAIR:AT1G11650.2); similar to RNA-binding re (GB:ABE90872.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.31951072240102 -3.71518504980759 0.0036403998386335 1 4.37125799223611 18.8628414831947 -0.31951072240102 0.0539719061737589 AT5G36170_at 9.13309345447049 9.22854437038003 9.70085035520061 9.59149836893758 10.1630451805310 9.66233243107862 9.77817792050555 9.72723451179837 9.48823843352969 9.8231559532505 9.93669944140685 10.1150114971532 9.9563991148051 10.0986332490043 10.1054583720808 10.2812971097864 9.85226752763888 9.94877570957007 9.75122098273475 0.103088761850135 0.0998213616289522 0.110785697935116 0.101080201421233 0.099114845931909 0.104096186384878 0.09828551072745 0.100594084322398 0.120156142874904 0.09828551072745 0.106339732706836 0.100527464950278 0.09828551072745 0.105728870370219 0.105171541145586 0.0986848402472378 0.112471445255497 0.103418175278561 0.09828551072745 5 5|0 -|/ 14253315 14254006 14253609.8 14253106 14255256 - gene protein_coding_gene TRUE TRUE AT5G36170.1|AT5G36170.2|AT5G36170.3 HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor Required for normal processing of polycistronic plastidial transcripts similar to peptide chain release factor, putative [Arabidopsis thaliana] (TAIR:AT1G56350.1); similar to putative translation releasing factor 2 [Cucumis sativus] (GB:CAG25777.1); contains InterPro domain PCRF; (InterPro:IPR005139); contains InterPro domain Protein chain release factor, RF-1/RF-2; (InterPro:IPR012086); contains InterPro domain Class I peptide chain release factor; (InterPro:IPR000352); contains InterPro domain Peptide chain release factor 2; (InterPro:IPR004374)|similar to peptide chain release factor, putative [Arabidopsis thaliana] (TAIR:AT1G56350.1); similar to putative translation releasing factor 2 [Cucumis sativus] (GB:CAG25777.1); contains InterPro domain PCRF; (InterPro:IPR005139); contains InterPro domain Class I peptide chain release factor; (InterPro:IPR000352); contains InterPro domain Peptide chain release factor 2; (InterPro:IPR004374) -0.359944297879190 -3.71227033850769 0.00365851096130460 1 4.36687752358063 19.4852751787056 -0.359944297879190 0.0906478140813816 AT5G01620_at 3.60854317411550 3.62307410693497 4.24300216975262 4.52880997919652 4.1237897740634 4.07193418616804 4.33684365858309 4.04354968408117 4.13137720780404 4.30198619640699 5.5100491116771 5.70930553643107 4.03498283049818 5.10441682549336 5.02494187364355 4.53263087017620 4.49221804309836 4.95055140970984 4.4662948801872 0.246085807756535 0.235191529236423 0.234197185992868 0.238189421214469 0.234197185992868 0.234197185992868 0.239988474873266 0.235151775557083 0.252444937330523 0.248092301564083 0.245056136453385 0.238894064417802 0.243241120155416 0.237838382730832 0.234197185992868 0.234785012978453 0.244681005098269 0.243984200160496 0.236853420465156 5 5|0 +|/ 234056 234791 234481.333 232562 234913 + gene protein_coding_gene TRUE TRUE AT5G01620.1|AT5G01620.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38320.1); similar to Os03g0817900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051703.1); similar to Os03g0817500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051701.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE79610.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -0.336661695551013 -3.71180383706214 0.00366141831585492 1 4.36617633114202 8.6823299203071 -0.336661695551013 0.0714796647284673 AT5G20820_at 2.21632817492877 2.18585028420626 1.71431725063959 1.69859313893875 1.78794451929696 1.62404967031531 1.99350966771507 1.90822850919856 2.38057682685146 2.79888016400890 4.35378860635794 4.40456146603851 3.63320797972852 4.35148063209877 4.53767321870927 4.92201318819829 3.76968742417578 3.92239371794936 2.66831275285709 0.261778593227237 0.260959865537836 0.273439445051576 0.265269929701164 0.260959865537836 0.267043700341111 0.264136486234928 0.286811147390919 0.270789428192585 0.266538799099888 0.271162180725008 0.280437226847321 0.263313361575283 0.277585085884066 0.265939255721500 0.276294115479518 0.270125045496738 0.274304835162568 0.265165309105136 5 5 - 7046913 7047222 7047054.909 7046753 7047398 - gene protein_coding_gene TRUE TRUE AT5G20820.1 auxin-responsive protein-related similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G72430.1); similar to Os08g0452500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061954.1); similar to auxin-induced protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD36435.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.303546173248015 3.70985463730967 0.00367359214717319 1 4.36324622869019 5.31748966543635 0.303546173248015 0.0325188763640147 AT5G04600_at 7.99301276691973 8.06155638097498 8.46859528363743 8.68426763337092 8.83627343650809 8.8022396754854 7.94971085212069 8.02850508956313 7.18218212751873 7.22035091305614 7.7263452747127 7.88123963369369 7.97947474097889 7.38854925114127 8.18443389353472 7.87010778588526 7.80890927018478 7.77370456359141 7.45961503167156 0.174086622086320 0.169676487600004 0.184297404224503 0.167085565935434 0.173739574007868 0.183788788889896 0.166300482253216 0.174584490837465 0.171318693159123 0.178116244344443 0.174800063175042 0.169043130090103 0.178075915231390 0.174051403622135 0.172660343561173 0.171342869245309 0.173038914649914 0.168443273764336 0.171628673064393 5 5|0 +|/ 1323787 1325442 1324314.333 1323640 1325628 + gene protein_coding_gene TRUE TRUE AT5G04600.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G47120.1); similar to RNA binding protein-like protein [Solanum tuberosum] (GB:ABB87134.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.309413460949555 -3.70928618906009 0.0036771503155725 1 4.36239163169433 15.9100092610546 -0.309413460949555 0.0418848125761865 AT5G57100_at 3.79463349005100 3.56870317955113 4.43875845701845 4.59560245683665 5.1576109791196 4.9430433420611 3.85651732648271 3.78185940117685 3.59124189152018 3.46304055572819 4.72470614254405 5.32268131805032 4.45199213668226 4.92504629607927 5.24507767602688 4.54938127863092 4.92470885232541 4.46052985020353 3.78809787240556 0.240113948787058 0.237266126643855 0.235385787789788 0.237910322784385 0.2310314876744 0.250034321870762 0.238274192183284 0.238949658729674 0.250252108704304 0.238738161355525 0.238609137592377 0.2310314876744 0.2310314876744 0.242317539620759 0.239305695823627 0.2310314876744 0.237363493321169 0.244320379776386 0.243231569582800 5 5|0 -|/ 23123792 23124567 23124150.3 23123528 23126021 - gene protein_coding_gene TRUE TRUE AT5G57100.1 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT5G55950.1); similar to glucose-6-phosphate/phosphate-tranlocator-like [Oryza sativa (japonica cultivar-group)] (GB:BAD13039.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.326172119238064 3.70847625686133 0.00368222620905954 1 4.36117392374171 8.48691218755509 0.326172119238064 0.0617341126429053 AT5G37790_at 3.05475509172703 2.55698282009995 2.57859679913946 2.89867911326263 2.7485774541337 2.84576797650612 4.36492204183179 4.69166694765629 2.78587739094773 4.10631931805934 5.02077552063287 6.00793025979618 5.48604167676536 5.74257185102702 5.01452056530482 5.1984535665052 4.60147120386363 4.90241102005465 4.30684040578949 0.24751557361095 0.238148952523210 0.233330571778438 0.235203996899890 0.231188793934396 0.243677594089453 0.238452670155426 0.23376688430615 0.255819044317960 0.239117887963381 0.232428798034913 0.237021623024979 0.230789586830692 0.231788779140463 0.229562521096383 0.237883257007953 0.23234154190829 0.230604442912191 0.239826985443957 5 5|0 -|/ 15025663 15026370 15025903.556 15025402 15028382 - gene protein_coding_gene TRUE TRUE AT5G37790.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66460.1); similar to Protein kinase domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95941.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.398964806440368 -3.70816487329601 0.00368417960029091 1 4.36070574712494 7.7073856953409 -0.398964806440368 0.118189893587716 AT5G41970_at 7.76510563671735 7.84910963939148 8.6899285733296 8.54396758695795 8.37530913305523 8.27857758228368 7.78050373703329 7.72250176385285 7.02591618004446 7.44493596096098 7.48742452224132 7.93489026486537 8.07963833864286 7.82033036682865 8.31749364155706 8.05463427318612 8.13450249824034 7.6651634270862 7.64634948898184 0.144105556023579 0.150840431560258 0.145737499266865 0.150900814663336 0.148526612910351 0.156704161914246 0.150075465736566 0.15265217361395 0.172144028938486 0.146209867792956 0.146541223978273 0.146695909450133 0.144386569372276 0.145290202951000 0.144672621947473 0.145984928433324 0.151337548269414 0.149116871894141 0.152001431502821 5 5|0 +|/ 16809319 16810119 16809680.3 16808410 16810485 + gene protein_coding_gene TRUE TRUE AT5G41970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49320.1); similar to LOC496075 protein [Xenopus laevis] (GB:AAH87491.1); similar to LOC496075 protein [Xenopus laevis] (GB:AAI06661.1); similar to Os02g0686600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047772.1); contains InterPro domain Metal-dependent protein hydrolase; (InterPro:IPR003226) -0.304879850949169 -3.70810107695274 0.00368457994410004 1 4.36060982553728 15.7802055615327 -0.304879850949169 0.0350761371978186 AT5G61290_at 2.96635548001502 3.40642174596813 3.59473327274836 4.36919429763757 4.0323507237656 4.41201384511238 3.47748280557011 3.41550613865216 2.21596322701651 2.21818517166056 3.47323959039322 3.60038702032443 3.22182064423053 3.97817725065344 2.70962523878686 3.5510261959839 3.60704769469195 3.58153791423224 2.29123930617812 0.231308454828528 0.219382965106960 0.231946633783229 0.228632860742784 0.228972781324728 0.230281763790890 0.222485744059019 0.224524122531538 0.244490369668281 0.229585269941170 0.218007002679765 0.218007002679765 0.229662338585035 0.218725424502461 0.221795231013958 0.218007002679765 0.218007002679765 0.231059257255769 0.240250297269796 5 5|0 +|/ 24666937 24667848 24667512.444 24665784 24668041 + gene protein_coding_gene TRUE TRUE AT5G61290.1 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT5G07800.1); similar to putative flavin-containing monooxygenase FMO-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD89476.1); similar to Os07g0112000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058741.1); similar to Os07g0112100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058742.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.482298217036839 3.70412973657856 0.00370959041632087 1 4.35463771364368 6.5628340863239 0.482298217036839 0.167910597415934 AT5G58930_at 8.1772021021295 8.4099064479537 8.70362175550123 8.84653423145105 8.94090341598799 8.84233025783765 8.0236882464376 8.37111634579126 9.12005365354313 8.86859642897774 9.21293626305456 9.33331280280353 8.9872408517671 9.25651232912956 9.1799560446193 9.39620419283477 9.38115381719193 9.42923521823208 8.8646437107467 0.132303332978133 0.122715994273063 0.134486387567411 0.122321213635401 0.125843277695732 0.126245821060168 0.139161825311316 0.129663457368896 0.128329375061706 0.122363448624308 0.125031584243517 0.122821425056392 0.126323012797165 0.126748227343402 0.122321213635401 0.125298578472423 0.127477418911101 0.122321213635401 0.126395692625172 5 5 - 23811788 23812318 23811987.818 23811541 23813687 - gene protein_coding_gene TRUE TRUE AT5G58930.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46990.1); similar to Os05g0450600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055704.1); similar to Os01g0852400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044827.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU90119.1); contains InterPro domain Protein of unknown function DUF740; (InterPro:IPR008004) -0.34343725853589 -3.69996083997726 0.00373603436041969 1 4.34836647512012 17.6509962859079 -0.34343725853589 0.0783534952034916 AT5G03070_at 4.34557349836074 4.56800706340695 5.42801248626955 5.0720008910428 5.46401875673876 5.4760033874775 5.02693202848912 5.06234949902182 4.32602100047723 4.53295014523595 5.04108222244 5.04289371186541 5.14100099463583 4.99146816489482 5.1274385789928 5.05831488286327 4.96565713570591 5.24114587240135 4.71241567165205 0.216708158275423 0.210634837065572 0.210474745314152 0.215124778334141 0.22413514058875 0.212914866495075 0.209989599606071 0.216384567337202 0.220707566881442 0.216776613584986 0.213176537257819 0.210934230732116 0.220129536068489 0.211479637137741 0.214450888672981 0.212862287569084 0.213952679180347 0.212389919324617 0.215716254324495 5 5 - 718504 719628 718979.273 718203 721538 - gene protein_coding_gene TRUE TRUE AT5G03070.1 binding similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.2); similar to unnamed protein product [Oryza sativa (japonica cultivar-group)] (GB:BAA31220.1); similar to Os01g0158000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042074.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.336704478516418 -3.69449388198108 0.00377100838830692 1 4.34013941653069 9.85532260198258 -0.336704478516418 0.072933656656831 AT5G04280_at 8.12467142343289 7.8943793084149 8.65927500032497 8.52816796938766 8.32332498845295 8.37869987928331 7.92445473628035 7.88071283650887 7.42621855426436 7.95614981649893 8.55878105559736 8.40399348620221 8.25483775142842 8.48195562670686 8.48750149273833 8.55293325750524 8.3970931651346 8.32852258322007 7.99465348991918 0.103650339513068 0.101765831344483 0.0993316577415242 0.103287949938070 0.0974482559741248 0.109609049707998 0.0974299819808351 0.103363505874515 0.115144668728974 0.0996644219768036 0.104239076776004 0.0989454478023414 0.099504736244537 0.100755237133961 0.102505063396574 0.0975227189555073 0.0985569205498879 0.105793945408830 0.0984957377527071 5 5 + 1194879 1195331 1195096.091 1192275 1195663 + gene protein_coding_gene TRUE TRUE AT5G04280.1 glycine-rich RNA-binding protein similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.2); similar to Os07g0187300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059075.1); similar to RNA-binding protein [Triticum aestivum] (GB:AAK01176.1); similar to Os03g0681900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050909.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.312242279814476 -3.69357987813184 0.00377688859876236 1 4.33876361153748 16.3269822290328 -0.312242279814476 0.047457143701351 AT5G02280_at 6.8607687117585 6.87918326436723 6.97477066766297 7.32128806062366 7.36754256492334 7.47546628782415 7.3605034677836 7.52169824614671 6.73367707884545 6.77951453140523 8.0968272115114 8.24330949025916 7.99234876019753 8.14153799482317 8.18352808909796 8.0228356777843 7.9604185401149 8.1606937465912 7.16822131655188 0.167731169321215 0.164565137142371 0.166478416287596 0.160558420027421 0.162190510018032 0.167724512218926 0.164364012797200 0.171370219831175 0.184453859459027 0.164265198957531 0.161078938831249 0.167017346742904 0.159817981378309 0.170112909287580 0.164672412688698 0.165847945462445 0.173187877060057 0.171380844019707 0.172834367132163 5 5|0 +|/ 469375 470097 469901.3 469296 470283 + gene protein_coding_gene TRUE TRUE AT5G02280.1 synbindin, putative similar to synbindin, putative [Arabidopsis thaliana] (TAIR:AT1G51160.2); similar to hypothetical protein DDBDRAFT_0204749 [Dictyostelium discoideum AX4] (GB:XP_641000.1); similar to Os07g0454700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059557.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sybindin-like protein; (InterPro:IPR007233) -0.331946836733909 -3.69187524295712 0.00378788069523583 1 4.3361974420562 14.7171485327521 -0.331946836733909 0.0687975950393116 AT5G17620_at 4.43079983160596 4.2753515528227 3.69252787566743 4.1299071385879 4.68685645711307 4.802901582888 3.81225875708715 3.88025777676931 3.86899719414706 4.24713547287946 5.44569252236848 5.42757646050916 4.93521994255925 4.56863390429449 5.21133123303243 4.9276200608926 4.38154956100076 5.11692079457923 4.6758613049718 0.220014353966129 0.211264986659246 0.212976245014886 0.221289146608794 0.206568921328434 0.206568921328434 0.212673280340317 0.219435485079255 0.218376113176438 0.215517233430658 0.212346032050627 0.209099849772430 0.211408823691236 0.216405391586188 0.217683550968722 0.218778419785822 0.220253321765843 0.207898851383973 0.209736540565634 5 5 - 5805951 5807414 5806190.545 5805757 5808563 - gene protein_coding_gene TRUE TRUE AT5G17620.1 similar to nuclear matrix protein 1 [Lycopersicon esculentum] (GB:AAK83083.1); contains InterPro domain Plant nuclear matrix 1; (InterPro:IPR010604) -0.349046068555188 -3.69175837820858 0.00378863549356775 1 4.33602150038338 8.84676564685302 -0.349046068555188 0.0836330641413996 AT5G46160_at 7.1258844750382 7.42737387433014 7.64573154690482 7.73918660926954 7.79043332032769 7.77762922758648 7.27279056199585 7.29973578028992 6.3593781577427 6.94149843236534 7.29897188740645 7.92504519082936 7.79921599308841 7.69501897355791 7.72896474034142 8.11542913150183 7.94006894599318 7.27810887144884 7.17168206358395 0.185525634913915 0.176501897807738 0.176257829254252 0.179339289940353 0.176374857030708 0.176901144924429 0.178814558315642 0.173192943694411 0.200430055360645 0.188017444688965 0.181087059089022 0.173192943694411 0.173192943694411 0.184904457543701 0.175565667904346 0.173192943694411 0.182198750673274 0.18991844191142 0.195123489903548 5 5 - 18728726 18729031 18728876.818 18728387 18729750 - gene protein_coding_gene TRUE TRUE AT5G46160.1|AT5G46160.2 ribosomal protein L14 family protein / huellenlos paralog (HLP) similar to HLL (HUELLENLOS), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G17560.1); similar to Ribosomal protein L14b/L23e [Medicago truncatula] (GB:ABE94699.1); contains InterPro domain Ribosomal protein L14, bacterial and organelle form; (InterPro:IPR005745); contains InterPro domain Ribosomal protein L14b/L23e; (InterPro:IPR000218) -0.318109354133325 -3.68971835699094 0.00380183657307132 1 4.33294995533054 14.7832402668020 -0.318109354133325 0.0548667065128257 AT5G47720_at 6.26064034267912 6.06154663399688 7.4953323648935 7.211100401525 7.55242905637473 7.27811869048467 6.73924384806078 6.75179161165251 6.4660929077919 6.88056197992168 7.05667266837282 7.23320133325938 6.82185415829971 7.185813562892 7.01060582364974 7.34703514089265 7.40991099092782 7.37509853437082 6.81379644230046 0.165196600754846 0.151660042893798 0.155973540295707 0.155182826823320 0.145629196770084 0.150584543942864 0.154245569075175 0.156528026733011 0.1527807103993 0.149699628302988 0.154007094236781 0.150713399297111 0.152585897124545 0.155103637018706 0.147639929138665 0.147651013351712 0.152263474286986 0.145329743024126 0.149441387971266 5 5|0 +|/ 19350248 19351040 19350760.556 19348773 19351653 + gene protein_coding_gene TRUE TRUE AT5G47720.1|AT5G47720.2|AT5G47720.3|AT5G47720.4|AT5G47720.5 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative|acetyl-CoA C-acetyltransferase Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.2); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.2); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); similar to peroxisomal acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95619.1); contains InterPro domain Thiolase; (InterPro:IPR002155)|Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase 2) (Thiolase 2) [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2, EMBRYO DEFECTIVE 1276), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.1); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltransferase [Hevea brasiliensis] (GB:AAL18924.1); contains InterPro domain Thiolase; (InterPro:IPR002155) -0.340290505668417 -3.68834518834851 0.00381074923550078 1 4.33088217406261 13.8688626036690 -0.340290505668417 0.0765812813017672 AT5G15330_at 3.52308993536891 4.04357053452349 3.5655551350907 3.9200570716031 4.92817241834614 4.68725690091794 3.77963188295675 3.68942653276195 4.23278257149677 4.16478264528174 4.83323253702932 4.33918529645023 4.27647332521223 4.51849928617167 4.23488959129053 5.04512750002414 4.58442708449131 4.53394271124632 4.42563816078054 0.237791077075599 0.219585916571152 0.233114845767519 0.232003635939952 0.228084804788873 0.250392300749358 0.230868089113098 0.225122828734707 0.227297874138408 0.216817523109877 0.224557056801953 0.229188758023984 0.217701629230662 0.217226190936076 0.228723570840004 0.220960922560432 0.223005051535169 0.231141008335418 0.221480184434852 5 5 + 4981438 4982022 4981758.364 4980491 4982234 + gene protein_coding_gene TRUE TRUE AT5G15330.1 SPX (SYG1/Pho81/XPR1) domain-containing protein similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26660.1); similar to putative signal transduction protein [Oryza sativa] (GB:AAL79759.1); contains InterPro domain SPX, N-terminal; (InterPro:IPR004331) -0.396075463149316 -3.68796936248363 0.00381319233362199 1 4.33031619895126 8.42715669761737 -0.396075463149316 0.117721567930738 AT5G16180_at 5.22008350342714 5.94782396779606 6.29510404892806 5.98406414832196 7.32723229879586 6.5676193314263 5.25770959216615 5.02455376549672 6.65539687348116 6.24214089955849 6.46174175243414 6.45251334053481 5.85644944483006 6.17237799471143 6.00518469380598 6.72758853686211 5.66008166599886 6.26821928457847 6.19097748363163 0.238120268620687 0.218467605297863 0.224893557319574 0.229299266499020 0.223975546745889 0.233981033519383 0.236056064007399 0.227004743918914 0.237254631816930 0.221581822869112 0.221629255417452 0.218467605297863 0.224319585602435 0.230068981745066 0.220955965485032 0.218467605297863 0.230688049477843 0.225770845605976 0.221489585174525 5 0|5 /|+ 5282211 5282816 5282547.9 5279887 5282901 + gene protein_coding_gene TRUE TRUE AT5G16180.1 ATCRS1/CRS1 (ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1) similar to EMB1865 (EMBRYO DEFECTIVE 1865) [Arabidopsis thaliana] (TAIR:AT3G18390.1); similar to Os08g0360100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061635.1); similar to CRS1 [Zea mays] (GB:AAG00595.1); contains InterPro domain CRS1/YhbY; (InterPro:IPR001890) -0.527881276280717 -3.6837933724329 0.00384044823024690 1 4.32402623835496 12.2347028360997 -0.527881276280717 0.194077970290378 AT5G59080_at 9.85670099235515 9.89955444789674 9.87450664647416 9.93090815084376 11.0764373557899 10.7523580122570 10.4093297639316 10.263690452143 10.1013915381151 10.0695795083330 10.3967152595911 10.4433139485243 10.3892388749365 10.1641222101154 10.1507287802766 10.8581797834589 10.4996613614541 10.3699045981922 10.0476465420076 0.125460710457543 0.128626386833678 0.134410904492226 0.125920385008438 0.131561225439415 0.136541229515251 0.125491677519640 0.127770064779876 0.136763147699224 0.128985426721982 0.128184259000593 0.125144486587801 0.126880890111850 0.129416481342122 0.133418448353013 0.125371888356280 0.133157017661278 0.129318737429060 0.127128223455333 5 5|0 -|/ 23864919 23865595 23865242 23864633 23865783 - gene protein_coding_gene TRUE TRUE AT5G59080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02020.1) -0.324766154792770 -3.68173485946572 0.00385395791548467 1 4.32092490524406 20.4988635434883 -0.324766154792770 0.0626963883588422 AT5G48780_at 1.58522662070146 1.58381807840422 1.61676121524911 1.72191180686539 1.4137121308257 1.22314896905178 1.27543477438655 1.31321930542308 1.84063028940161 1.88548246174296 1.23975190472475 1.15620162471829 1.00098876039803 1.07142591632762 1.41084282580633 1.32475173179411 1.51616159127960 1.83513405996716 1.59059024713677 0.212209263304238 0.209989406175368 0.211825058957518 0.213250824014587 0.209625169218239 0.209444551663518 0.211273632590342 0.210337387915469 0.22037619958058 0.219199672544499 0.209770945266341 0.222454605009569 0.222958440013937 0.218897685452138 0.210898292579523 0.217840965966335 0.220505068479031 0.215694397326276 0.217325371813697 5 5 + 19796277 19796703 19796507.636 19794694 19796830 + gene protein_coding_gene TRUE TRUE AT5G48780.1 disease resistance protein (TIR-NBS class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G17680.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) -0.304630582808327 -3.68135323588906 0.00385646785129843 1 4.3203499003505 3.01247492993213 -0.304630582808327 0.0382292677226816 AT5G43770_at 2.75423625471592 2.59535190682803 2.29708833935294 2.37193811752353 2.42399750058950 2.46215112262664 2.5917631442143 2.45526047108806 2.63680967949671 2.7961462863777 2.96554825128925 3.10443482700331 2.97629466261219 2.35878560748451 3.20574312123269 2.85494141231573 2.79188556458739 3.25135555567519 2.65468022958525 0.211039451008280 0.208857988922093 0.22545629164028 0.212550965873468 0.225569592479597 0.211622797865081 0.214780932378637 0.220653020838196 0.224338304090755 0.213035844081708 0.210690108343301 0.208485281863490 0.211412724665936 0.212140665924111 0.218896890145484 0.209369639861436 0.218869627793383 0.217762386992942 0.216983220886282 5 5 + 17606062 17606543 17606337.909 17606025 17606694 + gene protein_coding_gene TRUE TRUE AT5G43770.1 proline-rich family protein similar to late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] (TAIR:AT3G19430.1); similar to putative membrane protein [Emiliania huxleyi virus 86] (GB:YP_294122.1); contains domain PRICHEXTENSN (PR01217) -0.304912915864255 -3.67827939051609 0.00387674633809555 1 4.31571780941296 5.31122453566482 -0.304912915864255 0.0390564877147362 AT5G54720_at 3.96583111218576 3.75727989561712 4.91743648443609 4.99050075141217 4.45071370372127 4.14817665816538 3.46047892460722 2.97296320248386 2.36207263471209 2.15660635040120 3.52007267099297 3.00189549471513 2.55419463529403 3.33290895780355 2.99794357287314 2.54881316194485 3.01425987738723 2.87226769632906 2.15867739095617 0.240312287179977 0.23931246438203 0.238844878075286 0.244984120496123 0.237196432989711 0.243379979328087 0.233937452018638 0.236312505143877 0.23731669440421 0.236717386867588 0.243715032660104 0.233937452018638 0.236748599744545 0.24096198343462 0.237788207428030 0.236159498794204 0.234459251905630 0.243338641857438 0.241620530640679 5 5 - 22249551 22250042 22249815.818 22249421 22250175 - gene protein_coding_gene TRUE TRUE AT5G54720.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54710.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.378202978786306 3.67778714360246 0.0038800039856088 1 4.31497592101232 6.68596257513226 0.378202978786306 0.106401494489422 AT5G44450_at 6.7051978057676 6.67778793140805 8.03095760777644 7.94243359221831 8.405872398343 8.01893147294091 6.70856529605121 6.65259030302163 6.24067776892569 6.10508516915389 7.49885264769818 7.32985305153633 7.44117591975191 7.62018274154532 7.31776853960149 7.88722629075726 7.97389860411202 7.13062758789828 6.34288073698422 0.184872852575909 0.180041190507142 0.182607292747566 0.182972954963709 0.183904808157255 0.176217690364046 0.178612376035973 0.187821105177429 0.204595846461752 0.19506309669331 0.180142749723834 0.185150240790565 0.179769192497946 0.178037427240301 0.177652219640163 0.181742878485224 0.176217690364046 0.194541586885485 0.179140649157733 5 5|0 -|/ 17931596 17932432 17932047.111 17931250 17933246 - gene protein_coding_gene TRUE TRUE AT5G44450.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK09232.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601); contains InterPro domain Protein of unknown function DUF858, methyltransferase-like; (InterPro:IPR008576) 0.331132118926237 3.67407844843345 0.00390463910963730 1 4.30938545708098 14.2700400832162 0.331132118926237 0.0695335883425964 AT5G60280_at 2.34584690777621 2.7539564443889 3.57669282243535 3.96503999845376 2.13162179865531 2.17040870080256 1.08176489450771 0.919767029671821 1.64526882672352 1.29644489805415 1.40201100199309 1.46941589260378 1.15837046605965 0.887296574105867 1.11375129285838 1.42199526411772 1.20555794853327 1.40056354769228 1.28008224554552 0.241494140627425 0.252769597620277 0.250481956309081 0.267738939439040 0.241494140627425 0.243167119316022 0.241494140627425 0.242816022639109 0.254723881929266 0.251218930232191 0.247436597557613 0.245613678784626 0.246910456024272 0.248877024994100 0.244870983249064 0.250947779713157 0.248482726749002 0.248964436939676 0.242385276634029 5 5 + 24279296 24279727 24279559.545 24277789 24279762 + gene protein_coding_gene TRUE TRUE AT5G60280.1 lectin protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45330.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45440.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.371065835584698 3.67369719432899 0.00390718076482028 1 4.30881066551319 3.70045511055474 0.371065835584698 0.101663488666995 AT5G19150_at 6.26395246100343 6.45778625523857 6.62703800136663 6.92996141811121 7.66378006445537 7.04231961339093 6.3932871462526 6.37900354773943 5.9698348186807 6.59504350709946 7.1724044994313 7.38794058243915 6.77581892419048 7.40093677014626 6.97717084004508 7.5546031551228 6.97882544461425 7.02042458056581 7.16430432637687 0.189190774243687 0.180549851271137 0.192106974576843 0.182490585989962 0.177225278976362 0.199299378139735 0.183572065952658 0.189166458222843 0.197605736494385 0.193357928024027 0.188641423550040 0.180004444073802 0.180795713014377 0.183671285150042 0.187067013845652 0.177225278976362 0.199212296378003 0.184631975218709 0.183043897644778 5 5|0 -|/ 6426421 6427436 6426903.143 6423307 6428469 - gene protein_coding_gene TRUE TRUE AT5G19150.1|AT5G19150.2 carbohydrate kinase family similar to PREDICTED: similar to CG10424-PA [Canis familiaris] (GB:XP_849113.1); similar to Os11g0276300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067687.1); contains InterPro domain Carbohydrate kinase; (InterPro:IPR000631) -0.403999598722175 -3.66755890236733 0.00394833869319525 1 4.29955402758383 13.5870959719223 -0.403999598722175 0.124280631815476 AT5G04810_at 8.9357900121144 8.93093282466747 9.46708826368477 9.55724073221928 10.0739841350567 9.75606596965656 9.36307386495364 9.0707363230682 9.1282670544332 9.56027209675484 9.45263520738741 9.69556737066589 9.55880103432723 9.50317836229287 9.33636839391277 9.88835093291346 9.87283058676616 9.57257600635751 9.76839645751164 0.0890444661272705 0.085216433497887 0.0911108252843776 0.087239269869404 0.0930382601359961 0.0881598141511248 0.0863691761622799 0.0869193964426282 0.0983603324079023 0.0908888409547979 0.0869977710585443 0.085203087493312 0.0919809450948657 0.0922298785782576 0.0892137757689782 0.0888701483385482 0.0863041609664221 0.0880455651072159 0.0879418628407216 5 5 + 1393112 1393617 1393404.818 1390035 1393931 + gene protein_coding_gene TRUE TRUE AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to Os04g0684500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054310.1); similar to H0913C04.4 [Oryza sativa (indica cultivar-group)] (GB:CAJ86163.1); similar to pentatricopeptide repeat protein [Zea mays] (GB:ABF57644.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.337808075987003 -3.66423097790161 0.00397084015735481 1 4.29453362874801 18.9422058605415 -0.337808075987003 0.0763569770163904 AT5G18490_at 7.06497026398192 7.55525774853673 8.47995555670001 8.70870816645018 8.62611133756464 8.32438820966685 5.25538117054861 5.21769163255397 6.3484757569004 5.4305438469758 5.97233951149206 6.23116159775561 6.42306252671736 6.30307975692261 5.23539212163001 6.9573595516702 6.72674093044912 6.51187077297527 5.36037975430127 0.271906393250849 0.268547710365726 0.273104187592679 0.280476157062773 0.268547710365726 0.283511081918526 0.268547710365726 0.271407080817711 0.279269645494642 0.273112899029833 0.277735036632609 0.269729117506335 0.276932470994056 0.275620649097364 0.277528754861175 0.268547710365726 0.282935513235059 0.269935499501145 0.268547710365726 5 5 - 6134340 6134828 6134625.455 6134154 6136767 - gene protein_coding_gene TRUE TRUE AT5G18490.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04090.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04350.1); similar to Protein of unknown function DUF946, plant [Medicago truncatula] (GB:ABE91890.1); similar to Protein of unknown function DUF946, plant [Medicago truncatula] (GB:ABE90426.1); contains InterPro domain Protein of unknown function DUF946, plant; (InterPro:IPR009291) 0.378034236860407 3.66218618158698 0.00398473165697721 1 4.29144827661621 13.4081874935474 0.378034236860407 0.107400869911256 AT5G18410_at 6.31841054923069 6.67667847261426 6.0535100197585 6.29840757316389 7.4629988722022 7.13224604991068 6.71466350758299 6.82991534971662 6.9714818652413 6.7657464232264 8.30533007124913 8.86930311448687 8.2087403694029 8.1811724446867 8.48189422717191 8.30472431872632 7.13092415760541 8.22124612193456 7.24670473172533 0.220810570056581 0.208627351987233 0.224230400862261 0.223958229540947 0.212713418492085 0.223426319234330 0.216761616434493 0.214464942817557 0.217075772351981 0.208507270915574 0.210414257145287 0.208942552387979 0.208607336190612 0.210012742530064 0.219338477950452 0.208507270915574 0.236607494022996 0.217228767094544 0.21139036720794 5 5 - 6097464 6098159 6097765.545 6097293 6104982 - gene protein_coding_gene TRUE TRUE AT5G18410.1|AT5G18410.2 KLK (KLUNKER); transcriptional activator|KLK (KLUNKER) distorted trichomes and exhibits a diffuse actin cytoskeleton similar to PIROGI, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93934.1); similar to Cytoplasmic fra (GB:ABE90372.1); similar to Os03g0143800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048941.1); contains InterPro domain Cytoplasmic fragile X mental retardation protein interacting protein; (InterPro:IPR008081); contains InterPro domain t-snare; (InterPro:IPR010989) -0.362406696585578 -3.65785178686792 0.00401434429304889 1 4.28490659236375 14.2896343958836 -0.362406696585578 0.096509768926451 AT5G05570_at 5.71888560495597 6.09417854699962 6.28419247354456 6.0197331481532 6.74913371990264 6.03059123828141 5.64823770222126 5.12345153353975 6.02679477057934 6.49880284886986 7.02139131409568 7.38870872363967 6.53097327919246 6.91461398511796 6.15617826263427 7.11362871949509 6.48240702244845 6.33348950610558 6.23723426197028 0.252523030982163 0.247746995907868 0.267790413936953 0.262715833699640 0.241097646455843 0.259129039439638 0.245909457377271 0.246881543161908 0.258508507298345 0.25733707745798 0.246368051784097 0.248554640199017 0.246006872044578 0.260635394183227 0.247936421600138 0.244728548211860 0.26338306388964 0.244363069274278 0.248611573189878 5 5|0 +|/ 1662747 1663661 1663123 1656567 1663930 + gene protein_coding_gene TRUE TRUE AT5G05570.1 transducin family protein / WD-40 repeat family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35560.1); similar to Os07g0693700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060732.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC75571.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.485856290498711 -3.65763689995281 0.00401581831491528 1 4.28458221777162 12.4570260686486 -0.485856290498711 0.173269753717548 AT5G46420_at 9.09843838371383 9.05743066538147 9.49550139636911 9.25008889441484 9.99471331382296 9.51385337231745 9.47369798477214 9.4409633976801 9.3824622373003 9.56726906733405 9.83069848035389 9.90381931167296 9.72551828221955 9.88049398564404 9.94622186441706 10.1591305730654 9.86969016366036 9.9252046024519 9.54257271056444 0.107112318847923 0.0994477971117974 0.111132903158772 0.110489263457625 0.106602520401931 0.105713344510869 0.106005895880429 0.103854504310645 0.112002540083479 0.0994477971117974 0.104575643637175 0.103667628553154 0.104584631472814 0.0994477971117974 0.101773965610432 0.104222314723531 0.116338819637872 0.104315593345279 0.103369486182013 5 5 + 18849468 18850032 18849701.727 18847182 18850180 + gene protein_coding_gene TRUE TRUE AT5G46420.1 16S rRNA processing protein RimM family similar to UDP-N-acetylglucosamine pyrophosphorylase-related [Arabidopsis thaliana] (TAIR:AT1G31070.2); similar to Photosynthetic reaction centre, H-chain, cytoplasmic [Medicago truncatula] (GB:ABE92785.1); contains InterPro domain 16S rRNA processing protein RimM; (InterPro:IPR011961); contains InterPro domain PRC-barrel; (InterPro:IPR007903); contains InterPro domain Photosynthetic reaction centre, H-chain, cytoplasmic; (InterPro:IPR011033); contains InterPro domain RimM protein; (InterPro:IPR002676) -0.358162727508628 -3.65056630486376 0.00406463293180173 1 4.27390609242703 19.1168518408933 -0.358162727508628 0.0938662862768577 AT5G65950_at 8.7296686105198 8.84686426250565 9.13039617229828 9.25184006816092 9.28358784472895 9.17542653103822 8.50401163779043 8.45521323827032 8.7027476067774 8.88229109410144 9.31532325697269 9.28600651870988 9.09234288108047 9.08773550142331 9.13919883145188 9.36247909911863 9.26883193472618 9.19607379230938 8.93599536139169 0.113066532187242 0.113910057486814 0.123791779582729 0.119826261829749 0.112604670063216 0.113919861046388 0.120833987837307 0.118436745439733 0.135099563652033 0.114729211672585 0.111255415640255 0.111255415640255 0.119803388945085 0.117631631857719 0.114233942005983 0.111255415640255 0.115883964856869 0.115479005400722 0.111719361799364 5 5 + 26401838 26402156 26401998.364 26397349 26402447 + gene protein_coding_gene TRUE TRUE AT5G65950.1 binding similar to Os02g0714500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047920.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33026.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Protein of unknown function DUF1683, C-terminal; (InterPro:IPR012880); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.300326000710051 -3.64819307072963 0.00408115476229937 1 4.27032137926029 17.9515478778629 -0.300326000710051 0.0357028146507194 AT5G02230_at 4.8912184761004 6.05948707060517 9.66570160570844 9.59842898498867 8.87919814206218 8.6734279809795 9.50875780960158 9.67175828402357 7.56275767391653 8.69610148885755 9.38125594150044 8.66808274529495 9.83965794211477 9.4167279677745 8.74100946712363 9.95407596771934 9.86309041521348 8.90290136980858 8.52263465103978 0.187605713237099 0.171766914993971 0.157866803144953 0.159120529474350 0.161650182549809 0.154294983913756 0.153541831455838 0.157304430479332 0.172519232330767 0.161000179214896 0.148761803647388 0.149556348188575 0.150851927871796 0.158529120201393 0.147616158011482 0.149223868375686 0.164104687565363 0.156073301540424 0.159103314945257 5 5|0 +|/ 449617 450472 450008.333 448103 450652 + gene protein_coding_gene TRUE TRUE AT5G02230.1|AT5G02230.2 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G59490.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.548009188847274 3.64702666911734 0.00408930039304079 1 4.26855932105511 17.171671376762 0.548009188847274 0.207542087379360 AT5G66410_at 6.51026730539056 6.57628493269134 6.57650638955978 6.75204803152987 6.42265531240013 7.2251579510524 6.67192959679001 7.09909561792934 6.81467813073087 6.72807942713593 8.3946347752113 8.75003005858036 7.62673476600103 7.57657385082594 8.6097172198172 7.77800237580161 7.1409038402507 7.69094128280338 6.98239519020307 0.194907232174176 0.197852065587232 0.192462751703119 0.187650624270552 0.191409648870109 0.198500917584175 0.191477500598174 0.196102843322395 0.201232143044171 0.186289900714398 0.186289900714398 0.187109541667463 0.194463611507910 0.19620810820642 0.190330555669133 0.186289900714398 0.210160830262579 0.198100383050157 0.187271981180520 5 5|0 +|/ 26537958 26538650 26538310.4 26536996 26538922 + gene protein_coding_gene TRUE TRUE AT5G66410.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50960.1); similar to Thioredoxin domain 2 [Medicago truncatula] (GB:ABE84079.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.461968683912136 -3.64646011383581 0.00409326303059357 1 4.26770338180463 14.1230730690936 -0.461968683912136 0.160638590809254 AT5G01490_at 2.58046781784338 2.45690234581656 2.67547652085562 2.87227298230276 2.3815171464792 2.32486228806630 2.08313831962846 2.79763522749384 3.06881903151432 2.92023799711846 2.64083181507868 3.08392967376395 2.38478370582067 2.91163987501785 2.60870532349966 2.12470895099856 2.82797041497268 3.02868403042234 2.86994872746355 0.239919657655506 0.235968173417049 0.233270726651429 0.240690286574276 0.234019127331423 0.230646986548178 0.232637896865413 0.233415305870476 0.223093516653526 0.223093516653526 0.242472054800497 0.223093516653526 0.225319231927590 0.240398989116939 0.229710868747526 0.223093516653526 0.242577567713656 0.239742345846764 0.228482079065472 5 5|0 +|/ 197185 198067 197732.125 195540 198523 + gene protein_coding_gene TRUE TRUE AT5G01490.1 CAX4 (cation exchanger 4); cation:cation antiporter Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family. Identical to Vacuolar cation/proton exchanger 4 (Ca(2+)/H(+) exchanger 4) (Ca(2+)/H(+) antiporter CAX4) (CAX4) [Arabidopsis Thaliana] (GB:Q945S5;GB:Q9M025); similar to CAX3 (cation exchanger 3), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT3G51860.1); similar to CAX [Suaeda maritima subsp. salsa] (GB:AAR99078.1); contains InterPro domain Calcium/proton exchanger; (InterPro:IPR004713); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837); contains InterPro domain Calcium/proton exchanger superfamily; (InterPro:IPR004798) -0.410551131002765 -3.63984525396116 0.00413982413723573 1 4.25770708544695 5.34873840225855 -0.410551131002765 0.130391019416044 AT5G04180_at 1.98302483878903 1.76926912139056 1.84600315640140 2.56503786306965 1.77065791030461 2.16836969317516 2.03676718616923 2.10975695705426 3.68438537127722 1.92001326438291 1.86817747902022 1.68743683791900 1.86091381354388 2.12927506177588 1.59634701366828 1.89819114933328 2.04936519081057 2.13985987281161 1.93146000869120 0.236382045214633 0.237851075350345 0.248417789372095 0.247932270585799 0.235578605978928 0.246631228019386 0.235578605978928 0.235578605978928 0.250044178000107 0.241569121189987 0.235874286915687 0.240438127861054 0.235615740220421 0.237298240385375 0.236723974359779 0.23691721586521 0.235578605978928 0.235578605978928 0.244489571070618 5 5|0 -|/ 1147909 1148745 1148218 1147655 1149285 - gene protein_coding_gene TRUE TRUE AT5G04180.1 carbonic anhydrase family protein similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT4G20990.1); similar to putative dioscorin class A precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD09854.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) -0.438092510224547 -3.63605948065979 0.00416671783691262 1 4.25198383063605 4.23893518269963 -0.438092510224547 0.147473097189249 AT5G47410_at 5.29342916402203 5.49209397438569 6.0249154825161 6.1031245890974 5.58203286670347 6.08064406922984 4.86744146200849 5.17526697226982 5.00101008304949 4.50124773832074 4.85047038516308 5.4124187387439 5.1389807242141 5.15309332961792 5.24051707052561 5.45038977688633 5.65668257741734 5.05810717953126 4.92914822271967 0.242259581402108 0.240815948181098 0.234865082121005 0.241350723447089 0.251030255328557 0.248064652714566 0.234865082121005 0.240129780146399 0.256023355187046 0.240194456189794 0.238549982245165 0.234865082121005 0.241626570605065 0.238498370013153 0.238335804490511 0.234865082121005 0.247302758333437 0.236611036760852 0.240602053610565 5 5 + 19249443 19249760 19249609.455 19249442 19249813 + gene protein_coding_gene TRUE TRUE AT5G47410.1 similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1) -0.376030811379465 -3.63547128271217 0.00417091251779007 1 4.25109445912908 10.6051441495920 -0.376030811379465 0.107927584032765 AT5G11700_at 8.69534942180759 8.87087877553476 9.07968155111177 9.051666204724 9.70936857822819 9.31168089706619 9.06295199181229 9.2957402047618 9.00284333405621 8.4074303494008 9.50118714730476 9.48859923064633 9.25930972239644 9.19780988821238 9.1201895072482 9.26698481205488 8.92627924364875 9.07849499818587 8.66666333563329 0.143250913019007 0.135651339737220 0.138977703777747 0.145354881645038 0.135651339737220 0.146526139079446 0.138405605741455 0.137779596790823 0.156515405780097 0.14467888421124 0.143579559146882 0.137585390432095 0.138503943289240 0.156346996723854 0.141258094424066 0.135651339737220 0.145527755993227 0.142405514673769 0.137597806161395 5 5 - 3763216 3763890 3763533.273 3762467 3771124 - gene protein_coding_gene TRUE TRUE AT5G11700.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G47020.1); similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT4G32920.1); similar to hypothetical protein MtrDRAFT_AC144766g15v1 [Medicago truncatula] (GB:ABE91983.1); similar to Thiolase [Medicago truncatula] (GB:ABE80802.1); similar to hypothetical protein MtrDRAFT_AC146940g33v1 [Medicago truncatula] (GB:ABE90405.1) -0.345940278266778 -3.63507937844043 0.0041737097719837 1 4.2505018673267 18.0957492823353 -0.345940278266778 0.0854724075409885 AT5G08190_at 5.78565599166142 5.74686156587934 6.57351589955938 6.63362211149286 7.72003066195335 7.08036885643932 5.46710183310169 5.17657397222369 4.33415163093921 4.95630347161539 6.8098505398005 6.46298669492701 6.10560226413227 6.15405278098268 6.40261040411828 6.85281310852542 5.99385257934067 5.37104969092532 5.36605714158307 0.251918429694707 0.248922974734348 0.251951233238070 0.252642398639036 0.264340767810429 0.256282138850162 0.246677847641475 0.246958933226296 0.254948239002726 0.258957655230047 0.245293332948822 0.251522478156308 0.252806701861072 0.271710736398934 0.245577738704036 0.245293332948822 0.254358600679758 0.258617657212501 0.255883789892767 5 0|5 /|+ 2636616 2637078 2636841 2635903 2637434 + gene protein_coding_gene TRUE TRUE AT5G08190.1|AT5G08190.2 TATA-binding protein-associated phosphoprotein Dr1 protein, putative similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) [Arabidopsis thaliana] (TAIR:AT5G23090.1); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124)|similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) [Arabidopsis thaliana] (TAIR:AT5G23090.4); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.397221545010146 3.63507342124927 0.00417375230697145 1 4.25049285942486 11.8502695311505 0.397221545010146 0.122207893832947 AT5G61370_at 3.63777379230447 3.67959520611474 3.98853335424644 4.13613735689739 3.78355426978794 3.83378959068799 3.01972255286527 3.15165462645462 3.46364501559200 3.25369350704757 3.47936153180689 2.99829858256591 3.3437773941072 3.22339029054309 3.08453578602155 3.34117161849458 3.81867350796139 3.20951516002219 3.17086326737348 0.194464570146562 0.198689157952276 0.196956608135689 0.202735319326828 0.205865151217567 0.198575883334012 0.194727313669627 0.194464570146562 0.2021239115156 0.20201470791295 0.194464570146562 0.194464570146562 0.202628503666155 0.199320424740119 0.197743079442741 0.195717634952647 0.194762536466695 0.198985950662123 0.194464570146562 5 5 - 24689330 24689808 24689559.182 24688996 24690883 - gene protein_coding_gene TRUE TRUE AT5G61370.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G60960.1); similar to Os10g0422300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064629.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47633.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.299368168194962 -3.63382088414258 0.00418270552073872 1 4.24859880195379 6.95804896730887 -0.299368168194962 0.0360791507354067 AT5G10470_at 9.47544897060205 9.5954582297093 10.1902135969514 10.1511562214529 10.2322702019394 10.0686548252593 10.4044226765063 10.4900937773133 10.0858390565299 10.2372087313913 10.7027952369278 10.5783225675609 10.8847365017028 10.6047232032285 10.4247018372615 10.8024151779418 10.4751641817711 10.8020223773265 10.1011081011091 0.0825960820623979 0.0847838625630743 0.0848614996232617 0.0849499824329052 0.0815437006809528 0.0870234877935665 0.0838451318398426 0.0824383256896098 0.094878217535449 0.0818143517471509 0.0811247036854186 0.0807963249140083 0.0801937282280597 0.0835910059103294 0.0843463134552934 0.0802434417944838 0.0897956490255096 0.0854994348118603 0.0804521384783856 5 5 - 3290162 3290782 3290491.545 3289926 3297374 - gene protein_coding_gene TRUE TRUE AT5G10470.1|AT5G10470.2 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G65460.1); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752)|similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G65460.1); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.300824975455112 -3.63165308642107 0.00419824803793088 1 4.24532028976482 20.476337528371 -0.300824975455112 0.0387106030673391 AT5G45160_at 6.56365242686206 6.85278156569223 7.53675408443369 7.7202561138384 8.48513221092848 7.92813998931526 5.84440010016573 5.58434251898717 5.1750706813322 5.14630061240171 5.83185496757136 6.71812267215634 6.30787514162423 6.44830048730677 5.62120411650242 6.73319247333037 6.42003590392408 7.16804459005663 5.36185480784744 0.224060223727943 0.209671455496706 0.222360638746676 0.214475256536142 0.215653147398747 0.212016830748836 0.226306190778780 0.217407144328256 0.215366868516033 0.218131237906897 0.218359202393763 0.225579820085856 0.215899992196502 0.218800511337669 0.222369570845876 0.209767963975961 0.234194124548897 0.215430840276007 0.218506146195041 5 5|0 +|/ 18286485 18287095 18286843.889 18281944 18287510 + gene protein_coding_gene TRUE TRUE AT5G45160.1 root hair defective 3 GTP-binding (RHD3) family protein similar to RHD3 (ROOT HAIR DEFECTIVE 3) [Arabidopsis thaliana] (TAIR:AT3G13870.1); similar to root hair defective 3 GTP-binding (RHD3) family protein [Arabidopsis thaliana] (TAIR:AT1G72960.1); similar to root hair defective 3 GTP-binding protein [Triticum aestivum] (GB:AAS67855.2); similar to Os01g0575000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043388.1); similar to Os12g0604600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067218.1); contains InterPro domain Root hair defective 3 GTP-binding; (InterPro:IPR008803) 0.396069159507409 3.63064721170201 0.00420548015827099 1 4.24379885493327 12.8813427902376 0.396069159507409 0.121771833932632 AT5G22450_at 7.73906777906111 7.69891148955119 8.70192513335615 8.78350095482998 8.8087595361423 8.8394417386364 6.94285584913995 7.05082977282328 7.33076082216866 7.22523054638397 8.38091711422781 8.44525183427074 8.32013879971114 8.45097648789982 7.99919656260514 8.4593191213592 8.43581428138288 8.14075489087015 7.39705778086595 0.170758363077446 0.159350238836381 0.167346907620667 0.163552088532316 0.161509397030086 0.162183185161926 0.172164739457025 0.169614413567171 0.183625103876282 0.178172744308393 0.15842681627392 0.158233965205276 0.159096303583554 0.161538535545589 0.176290127548295 0.159277949100802 0.170641044202752 0.176589320916681 0.164792397736154 5 5|0 -|/ 7437153 7437911 7437527 7437148 7442937 - gene protein_coding_gene TRUE TRUE AT5G22450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19390.1); similar to Os01g0967100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045507.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU44129.1); similar to Os05g0107300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054424.1) 0.293379412243461 3.63020862924969 0.00420863754625797 1 4.24313544176914 15.8940261248661 0.293379412243461 0.0249984083759324 AT5G56300_at 1.92563799313957 2.30308765916377 2.00196683184310 1.76575457749447 1.67818601260173 1.74724513793174 1.26213673166709 1.48436004776452 1.57815767696537 1.57997703095476 1.93450958581186 3.71749562562084 2.46002878187656 1.83818842455471 2.43179597351324 2.99052354403237 1.63269677488301 2.20733250650545 1.24369032698688 0.204426183162271 0.210915061599368 0.206864323987424 0.212497215113203 0.202659945769756 0.205659082009104 0.204949453952950 0.211188849536723 0.203491632507644 0.202659945769756 0.202659945769756 0.230671881431645 0.204394478937772 0.204579556219133 0.204991202901781 0.212510617413412 0.205128778373669 0.206923769499301 0.209294203280618 5 5 + 22817921 22818673 22818370.545 22816733 22818918 + gene protein_coding_gene TRUE TRUE AT5G56300.1 GAMT2; S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase similar to GAMT1, S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G26420.1); similar to H1005F08.17 [Oryza sativa (indica cultivar-group)] (GB:CAH65988.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.347257058756656 3.62973799699413 0.00421202838971746 1 4.24242352499792 3.70547008081846 0.347257058756656 0.086944572137639 AT5G24230_at 1.92943908287418 1.98246725534485 1.584534822467 1.63267876640891 1.77077114444004 1.7815163567583 1.91184519174161 1.85493452565206 2.04312828719009 2.26278392596402 1.7651101702763 1.48215020073653 1.91208465030304 1.82925566730490 2.27648976525840 1.63674932439719 2.15094556945633 2.39480785913993 1.63921683194711 0.247618587013962 0.251429212549365 0.251835689192024 0.239799432528076 0.247533436557226 0.245233767154005 0.252519301274918 0.248310230153756 0.240247409053532 0.241115008695181 0.241162293520697 0.241542458141559 0.239799432528076 0.239799432528076 0.242553815592434 0.241142282423814 0.255934011261665 0.253593860748896 0.239799432528076 5 5 + 8229799 8230709 8230008.182 8228895 8230967 + gene protein_coding_gene TRUE TRUE AT5G24230.1 similar to triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT5G24200.1); similar to Os02g0286200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046574.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84413.1); contains domain no description (G3D.3.40.50.1820); contains domain alpha/beta-Hydrolases (SSF53474) -0.290075170122437 -3.62847635501703 0.00422113229791219 1 4.24051493934444 3.76235280949061 -0.290075170122437 0.0159399315169996 AT5G27770_at 10.4834232675924 10.8321938712050 10.7601457728263 10.7073533698351 11.0477287145796 10.7351086007673 10.5528820582869 10.8050988383833 10.3415561012066 10.2172821532344 10.9345471670311 10.9795965461325 10.7694008109857 10.6921895171141 10.9532514374576 10.4917756970868 10.4348638837312 10.2152124097446 10.3773222971505 0.102740252148782 0.0969137247015287 0.0968623178117192 0.099435580969216 0.100468477795905 0.104211081405173 0.0982201379594986 0.0989010916500218 0.111564850111767 0.100556420341363 0.0960265535772865 0.0967030646540881 0.0955663992891658 0.098493835030766 0.0982893649641375 0.0955663992891658 0.111295572370152 0.114455488495312 0.0955663992891658 5 5 + 9836172 9837082 9836547.818 9835889 9837345 + gene protein_coding_gene TRUE TRUE AT5G27770.1 60S ribosomal protein L22 (RPL22C) Identical to 60S ribosomal protein L22-3 (RPL22C) [Arabidopsis Thaliana] (GB:Q9FE58); similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G05560.3); similar to Ribosomal L22e protein [Medicago truncatula] (GB:ABE92854.1); contains InterPro domain Ribosomal L22e protein; (InterPro:IPR002671) -0.353630173139376 -3.62237992698087 0.00426541118493738 1 4.23128987195987 21.2384459121133 -0.353630173139376 0.0925110499033546 AT5G28270_at 2.58898842344063 2.45675893042687 2.58906768019111 2.46859005322814 1.96245843621740 2.44855495549463 2.31380804822613 2.45179920388903 2.8575890658865 2.59687397898086 2.64976700078045 2.49181068108231 3.09787184783144 2.53340788105753 2.17906382426672 2.71324009405571 2.2266544151189 2.47320216196831 2.38382274930679 0.243249460644188 0.230751891485703 0.243547312386304 0.254944123465487 0.244234460202834 0.247902032867412 0.236892311429567 0.232020585448173 0.241011588020073 0.242390980523057 0.242902279601801 0.230026208301962 0.241423712785295 0.245549923574233 0.236527424030943 0.237068141940903 0.243859940063065 0.241586256307794 0.235943780578935 5 5|0 -|/ 10258097 10258398 10258254.571 10258094 10260475 - gene protein_coding_gene TRUE TRUE AT5G28270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28480.1); similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G12100.1); similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G45090.1); similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD64941.1) -0.353841900649057 -3.62119862502486 0.00427404647627323 1 4.22950185373837 4.98919780122002 -0.353841900649057 0.0927629307716535 AT5G63620_at 9.2078533943469 9.32182953855974 10.0967005043782 10.0927735642992 10.3779907663902 10.3445348995475 8.80601248317653 8.8774281103944 8.96838005456374 8.78991866334794 9.71961564754573 9.41301609494081 9.75105585367647 9.8958935374092 9.6076336109615 9.81668107374232 9.80964067791703 9.6264459120551 8.80504914698262 0.104144534299154 0.105549148551101 0.106835866173246 0.105585510828536 0.107420647387851 0.112853700159303 0.100897544262838 0.110501798494977 0.112899961014007 0.105495531824961 0.101377850317078 0.105494094878547 0.100474803001559 0.101281766726057 0.100869484681755 0.101331434779948 0.108814162577847 0.105978845619042 0.103250934637276 5 5|0 -|/ 25483611 25484463 25484099.2 25483354 25485659 - gene protein_coding_gene TRUE TRUE AT5G63620.1|AT5G63620.2 oxidoreductase, zinc-binding dehydrogenase family protein similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G64710.1); similar to Alcohol dehydrogenase superfamily, zinc-containing [Medicago truncatula] (GB:ABE83681.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.292225670770457 3.62108778544681 0.00427485763802953 1 4.22933407899342 18.9203639523012 0.292225670770457 0.0239950567375034 AT5G53740_at 1.97309103031941 2.28328647951267 1.94213390437999 2.51113239726201 2.06432985865984 2.10858377534686 2.13190649794056 2.56243502453381 2.64052003100160 2.68723963090033 2.16206083337462 2.54077296206357 1.70137179153282 2.28898989983506 2.52135524462682 2.22257580645835 2.39854978230241 2.38482224718540 2.36316111653708 0.257550451768046 0.259951151128028 0.265869596759766 0.266708733289841 0.265668008517648 0.277879102544006 0.258378565516691 0.262544744519099 0.266750122438415 0.266190078135370 0.263508617734585 0.255929107031599 0.256989535677751 0.259940238824055 0.261350011047284 0.256764708927076 0.259387146508730 0.255929107031599 0.280683665228196 5 5|0 +|/ 21829974 21831318 21830890.444 21828859 21832134 + gene protein_coding_gene TRUE TRUE AT5G53740.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53905.1) -0.415294935451237 -3.61872363888907 0.00429219721761457 1 4.22575521058485 4.61771366119542 -0.415294935451237 0.134859859881447 AT5G03420_at 6.89978450722511 6.82982637000395 7.70847870015441 7.38632664122063 7.82361951235044 7.42399648232332 7.30357095890328 6.82732295763043 6.95635171561719 6.86233995736878 7.38189231992038 7.44505420090204 7.11305411725634 7.48926505804565 7.60399623960075 7.60160633508162 7.46862168578328 7.45150791991192 6.64273094767315 0.148377610561171 0.152826411044603 0.153376808483278 0.152582567115934 0.156194267186145 0.159006351810397 0.148377610561171 0.163713868926093 0.172108271010459 0.160922786431083 0.148377610561171 0.150860044611120 0.154379403198628 0.151643631339163 0.159107725595072 0.155321553823416 0.154226257790051 0.167298503162885 0.154062801825152 5 5|0 +|/ 847252 848574 848185.556 845640 848601 + gene protein_coding_gene TRUE TRUE AT5G03420.1 dentin sialophosphoprotein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to Dentin sialophosphoprotein precursor (Dentin matrix protein 3) (DMP-3) [Macaca mulatta] (GB:XP_001098430.1) -0.394766011519657 -3.61861923103003 0.00429296466010742 1 4.22559714257119 14.407790236951 -0.394766011519657 0.121777721552644 AT5G28010_at 3.47151251040314 3.24895773874057 4.26597824519892 3.99797255954051 4.85387514803338 5.21750757069591 2.65971564819195 2.39627929831126 3.31865191019204 2.6544736232319 3.61711743650967 2.89342637813366 3.18871573603944 2.92648875147767 2.90019193545653 3.02338506793571 3.33895707316283 3.12304462988920 2.79825149078495 0.258464397592859 0.257473202453147 0.268047684783490 0.257479382836625 0.275040710596428 0.271910994236201 0.256049908057348 0.253320713176635 0.257786807050368 0.253414378745521 0.250943288354362 0.253216720026960 0.255681676029438 0.260855981605192 0.259716801553700 0.250943288354362 0.252599960490528 0.264144170682731 0.256788761399967 5 5|0 +|/ 10024827 10025329 10024998.2 10024817 10025386 + gene protein_coding_gene TRUE TRUE AT5G28010.1 Bet v I allergen family protein similar to Bet v I allergen family protein [Arabidopsis thaliana] (TAIR:AT5G28000.1); similar to major latex-like protein [Prunus persica] (GB:AAK14060.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) 0.360852629333354 3.61727440341425 0.00430286240859301 1 4.22356103571516 6.78907894862873 0.360852629333354 0.0983500155776857 AT5G17870_at 10.4365654010845 10.5780091049537 10.3977029097957 10.5390188820740 10.8824513374451 10.7897505719547 10.755113450347 10.9775870480562 10.8210988380907 10.8511219440583 11.5631804086778 11.7748212600233 11.3429964018132 11.4810748928679 11.8208632002465 11.6046782236446 11.0575431837412 11.0433910496502 10.9552798321512 0.0988569536494715 0.0984860101887602 0.0986080877002958 0.0977805914205005 0.0973089617628563 0.0995882924489518 0.0982824174362623 0.0914756716542872 0.098066929677924 0.104930676842711 0.0985577496583721 0.0947028462382818 0.0929926149743586 0.0996965643608467 0.0994641143964525 0.0938647062356978 0.105728682338586 0.0998348971747846 0.0955822616733658 5 5 + 5907823 5908099 5907969.182 5907777 5908337 + gene protein_coding_gene TRUE TRUE AT5G17870.1 plastid-specific ribosomal protein-related plastid-specific ribosomal protein 6 precursor (Psrp-6) - like Identical to Plastid-specific 50S ribosomal protein 6, chloroplast precursor (PSRP- 6) (CL25) (PSRP6) [Arabidopsis Thaliana] (GB:Q9FKP0); similar to Plastid-specific 50S ribosomal protein 6, chloroplast precursor (PSRP-6) (CL25) (GB:P82411) -0.311193037748453 -3.61626484381021 0.00431030812841694 1 4.22203240185478 21.8379758960554 -0.311193037748453 0.0541924925211607 AT5G19450_at 8.706718028129 8.6507654357389 8.99718621563433 9.14253814144282 9.35981202409173 8.62204065901599 8.53930966641583 8.52139236075265 8.99951826690577 8.88570295703014 9.43884465565666 9.34689616884808 9.19618155730395 9.35588999004636 9.13415974160658 9.26101456776621 9.04866541457021 9.21585912151286 8.90473760865188 0.109760017307992 0.110723924269662 0.111763562898187 0.110921665539919 0.113993586709833 0.119425678159493 0.108739884277189 0.107689498165958 0.113429100813128 0.108550391472192 0.111391596106950 0.108686935686609 0.111651603259915 0.117969801275982 0.115223461747090 0.109244776330068 0.109089078017361 0.107335535137598 0.110935526258894 5 0|5 /|- 6558738 6559668 6559375.778 6558428 6562002 - gene protein_coding_gene TRUE TRUE AT5G19450.1|AT5G19450.2 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); calcium- and calmodulin-dependent protein kinase/ kinase calcium-dependent protein kinase (CDPK19) mRNA, complete similar to CPK14 (calcium-dependent protein kinase 14), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G41860.1); similar to CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G57530.1); similar to CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12480.1); similar to calcium-dependent protein kinase [Fragaria x ananassa] (GB:AAB88537.1); similar to calcium-dependent calmodulin-independent protein kinase isoform 2 [Cicer arietinum] (GB:AAP72282.2); similar to calcium-dependent protein kinase 8 [Nicotiana plumba (GB:CAG27839.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.407757072955905 -3.61318913384631 0.00433307434983498 1 4.21737458996998 17.9073079062492 -0.407757072955905 0.130525611679385 AT5G61600_at 7.47628611206914 7.78309807954538 8.59083104086816 8.52131351326371 8.8345989028645 8.30240374098467 4.05775017282027 4.17845792692944 4.78894792010652 4.29164239700048 4.58607494150254 4.51569165372367 4.18984029654292 4.51483006817424 4.14720453314241 3.98456286992555 4.51948630966117 4.69774499467754 3.85037901604164 0.274329567766962 0.277468283598877 0.275493677060486 0.278860346633728 0.279910347011028 0.281350451674340 0.261741520930958 0.261165018489577 0.261609901131333 0.263310478728144 0.270566910314637 0.261165018489577 0.261165018489577 0.262385902452776 0.276966004554753 0.26647650163942 0.264888371645869 0.268380087159991 0.264132306218089 5 5 - 24783909 24784409 24784136.636 24783612 24784656 - gene protein_coding_gene TRUE TRUE AT5G61600.1 ethylene-responsive element-binding family protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G51190.1); similar to ethylene responsive element binding protein C4 [Capsicum annuum] (GB:AAX20037.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.375206258299614 3.61259342546610 0.00433749809520429 1 4.21647233633492 11.5704687209023 0.375206258299614 0.109006351425288 AT5G24570_at 9.33876477183212 9.47614740730236 9.8404444442312 10.0104823051322 10.7131284750670 10.5118615905087 9.28091016098447 9.4286536173714 9.52606911596475 9.22503684748798 10.7074784578738 10.4244211158436 10.2608795339507 10.5069116449544 10.3317461391985 10.5559225094617 9.70540467852442 10.2915639607060 8.96904792885851 0.100719729811108 0.102453855948382 0.102148435929578 0.100623628289481 0.101207665213327 0.104188326994336 0.099040107451355 0.107508673521617 0.111935993216596 0.103661187513406 0.101769643215270 0.098435795155082 0.100606875845850 0.102017878796495 0.107611582260564 0.102487614354413 0.104493440805147 0.104744986896867 0.100855729987774 5 5 - 8405818 8406004 8405908.727 8405684 8406135 - gene protein_coding_gene TRUE TRUE AT5G24570.1 unknown protein 0.313707747284969 3.61234037661024 0.00433937865462764 1 4.21608905931319 19.6190952478043 0.313707747284969 0.0574279106414157 AT5G40210_at 1.97160433629373 2.12097146474670 2.21448189426306 2.23909095699129 2.41083355576150 2.56909892017931 2.96089084374254 2.79036555742637 2.36358375072067 2.56268305155329 2.45355820536414 2.01048764037625 2.37201629633819 2.34311616217257 2.14038423462735 2.60910862902313 2.49144998907727 2.33465593876389 2.14110749886111 0.224903790941255 0.218358825426161 0.228481441525207 0.230926934504568 0.223433376524122 0.237999871097864 0.225999632758937 0.221566153140706 0.232647635045559 0.226297166985735 0.219672257639447 0.223562360895990 0.223942518959438 0.218358825426161 0.228648096882560 0.222769036748528 0.239290076420163 0.238662003523069 0.227502312504517 5 5|0 -|/ 16090967 16091798 16091455.111 16090848 16093345 - gene protein_coding_gene TRUE TRUE AT5G40210.1 nodulin MtN21 family protein similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT3G28130.2); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE93902.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) -0.305734055502399 -3.61133392808931 0.00434686652816297 1 4.2145645855548 4.75973647651533 -0.305734055502399 0.0480341093705061 AT5G28560_at 2.06955335303959 1.71974965504456 2.19631682484192 2.29520517380142 1.64106582388484 1.6620748899959 1.97663632792722 2.07500622864860 2.15650701493682 2.06700657425652 1.98008621419687 1.53993464703991 1.70381778603563 2.07508813447273 1.94718983830564 1.66947311637997 2.00531184165922 2.08149924799346 2.29253285949488 0.181846868653492 0.186664392661408 0.185410604437773 0.182594063338525 0.178883944266535 0.178883944266535 0.17967005069407 0.183087020390985 0.182020027594210 0.194522063398135 0.184392807744874 0.184293896346435 0.186629102796171 0.184708347618516 0.189493735868384 0.188696618274347 0.185283160344568 0.178883944266535 0.187377610385777 5 5|0 +|/ 10566865 10567098 10566982 10566850 10567134 + gene protein_coding_gene TRUE TRUE AT5G28560.1 unknown protein -0.321094564487692 -3.61131652416446 0.00434699612896492 1 4.21453822273736 3.97810882772626 -0.321094564487692 0.0652715648343257 AT5G60220_at 2.12547603795530 2.27562455796337 2.60987521821206 2.59985667662826 1.90977896481685 2.05097390833843 1.73091494477656 2.31750331533467 2.25048372923253 2.46600451638724 1.86708117695057 1.91889639140151 1.90897554730443 1.71065597916480 1.52696260158824 1.74563955446248 1.93554041495867 2.76567379041533 2.59704374256742 0.236287687310655 0.242639328357895 0.241198934098697 0.257713787024705 0.234005677427734 0.23498013251944 0.230553209870759 0.233668315850571 0.236309051493436 0.238497683144499 0.234754363896378 0.230553209870759 0.248764479215234 0.25027482646541 0.250795734461744 0.231837543318052 0.246259314586577 0.230553209870759 0.231431792461731 5 0|5 /|+ 24266904 24267249 24267046 24266183 24267291 + gene protein_coding_gene TRUE TRUE AT5G60220.1 TET4 (TETRASPANIN4) Member of TETRASPANIN family similar to TET3 (TETRASPANIN3) [Arabidopsis thaliana] (TAIR:AT3G45600.1); similar to CD9/CD37/CD63 antigen [Medicago truncatula] (GB:ABE85915.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) -0.372814737213572 -3.60874809901957 0.00436616612013325 1 4.21064730105498 4.38263654204976 -0.372814737213572 0.107609792461932 AT5G20450_at 2.89344232623742 3.13205927121453 3.24292041545894 2.9111091123227 2.99176300758453 3.06647270809358 3.17988482101239 3.00994726579031 2.72972477768573 2.85075085198606 3.53429918377441 3.59661935623684 3.01813456122598 2.72230002636932 3.3771363621854 3.31678389474083 2.66976055242110 3.07179759247467 3.21067016933814 0.187376852226021 0.185302773758216 0.182919187492056 0.184885218819529 0.183323896715111 0.188098902607852 0.190244940191812 0.191157629701849 0.192520987031613 0.183634480644322 0.189840643818117 0.182640363988229 0.18346136506456 0.188319386766649 0.188780996593436 0.187348564602168 0.190207076834249 0.183521239832400 0.182640363988229 5 5|0 -|/ 6911210 6911753 6911400.125 6910585 6913289 - gene protein_coding_gene TRUE TRUE AT5G20450.1|AT5G20450.2 motor similar to XIK (Myosin-like protein XIK), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT5G20490.1); similar to myosin XI [Nicotiana tabacum] (GB:BAD72949.1); contains InterPro domain Dilute; (InterPro:IPR002710) -0.333809311103536 -3.60453692351357 0.00439778639181607 1 4.20426619402834 6.10031780305524 -0.333809311103536 0.0776815186497711 AT5G18110_at 8.27269193210087 8.11428636415032 9.0295000119766 9.17420325751235 9.3254814121124 9.20166872264199 7.36378991834796 7.49628897486244 7.73094412872224 6.99061346849437 8.18051547686786 8.20662917694637 8.35971652507496 8.15856843283513 8.42419756041516 8.46473361878208 8.2559714443566 8.10479222322797 6.98474830772802 0.163761531821429 0.163637020944855 0.176528503948338 0.172714340566820 0.180612162416994 0.177413987880437 0.174037866832548 0.165633633840966 0.156391354385885 0.168204657171558 0.159058849099595 0.156391354385885 0.162037529890699 0.162637119380001 0.165990480489810 0.156391354385885 0.170139240000740 0.159721219068880 0.167502137131574 5 5|0 -|/ 5989123 5990492 5989802.444 5988746 5990683 - gene protein_coding_gene TRUE TRUE AT5G18110.1 NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding / translation initiation factor Identical to Eukaryotic translation initiation factor 4E type 3 (eIF4E type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP) [Arabidopsis Thaliana] (GB:Q9FK59;GB:O64928); similar to EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G18040.1); similar to Eukaryotic translation initiation factor 4E (eIF-4E) [Medicago truncatula] (GB:ABE86407.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) 0.305389879285591 3.60194122190371 0.00441739441187739 1 4.20033201035929 16.2496517536939 0.305389879285591 0.0486147899437762 AT5G56670_at 9.68407736428565 10.0994917627151 9.991508663324 9.96656856940408 10.1469932710157 9.89373297083324 9.9874762763568 10.2886104012691 9.69260053453754 9.62993424692866 10.494747813846 10.8341188702523 10.2436792883499 10.1564692378666 10.6321316748061 10.0538192215381 9.81458566694223 9.85702980201776 9.56793408740222 0.113148394417056 0.114529439013627 0.119316893057433 0.111735581555683 0.109593298824632 0.122639060802216 0.110323129628509 0.111348401816794 0.120718693549472 0.113528985906106 0.118394221017173 0.113895164351247 0.115113456371185 0.117392476179419 0.111979633129790 0.110373086455181 0.114413444618908 0.121826495190205 0.113800571974245 5 5 - 22952974 22953083 22953034.818 22952639 22953207 - gene protein_coding_gene TRUE TRUE AT5G56670.1 40S ribosomal protein S30 (RPS30C) Identical to 40S ribosomal protein S30 (RPS30C) [Arabidopsis Thaliana] (GB:P49689;GB:O82203;GB:Q9M0E4); similar to 40S ribosomal protein S30 (RPS30A) [Arabidopsis thaliana] (TAIR:AT2G19750.1); similar to 40S ribosomal protein S30 (RPS30B) [Arabidopsis thaliana] (TAIR:AT4G29390.1); similar to Ribosomal protein S30 [Medicago truncatula] (GB:ABE80883.1); similar to Os06g0172600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056941.1); contains InterPro domain Ribosomal protein S30; (InterPro:IPR006846) -0.360327811989573 -3.60172553857813 0.0044190277505999 1 4.20000507598134 19.9527969031880 -0.360327811989573 0.0991126939442205 AT5G56720_at 1.55095313419671 1.52030462852136 2.12486357525675 1.84435563460456 1.85756504882781 1.81644321942007 2.28226921907685 1.75761506704237 2.01324577516724 1.52704990353564 2.6957554429895 3.20350253635320 2.20144622452079 2.56477195313985 3.16752315376054 2.51853762522204 2.35033037000294 2.79798489895637 1.68385866496992 0.220765430175715 0.212060171010520 0.223567626636704 0.222056241769891 0.204617158336232 0.217100717920545 0.209301019728320 0.208815659555510 0.217304228005708 0.213589033233537 0.204779259239079 0.213174694748925 0.21596307163483 0.216255722486064 0.221648126702302 0.208277911974750 0.217408530636155 0.204871424951789 0.208422827602895 5 5 + 22963372 22963915 22963618.727 22962763 22963944 + gene protein_coding_gene TRUE TRUE AT5G56720.1 malate dehydrogenase, cytosolic, putative similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G43330.1); similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT1G04410.1); similar to cytosolic malate dehydrogenase [Lycopersicon esculentum] (GB:AAU29199.1); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NAD-dependent, cytosolic; (InterPro:IPR011274); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557) 0.365966037929781 3.60038125551395 0.00442922188623175 1 4.19796728699953 4.05872934428952 0.365966037929781 0.103337983690983 AT5G35430_at 4.07510323050132 4.33309242083363 4.93144735445485 5.22862175685267 5.37746170761623 5.14491108808684 3.90203951761702 4.14619782999016 3.35191087110155 3.27259564024982 4.36420785660368 4.56606473677961 4.73315941850488 4.27508043938584 4.54123000588446 4.37753766910925 4.52043883676767 4.60108559050239 3.15266278506620 0.178670665815976 0.17507018011649 0.180237914857296 0.178666078491433 0.179757665474035 0.187520789695006 0.177133770753793 0.173556737825463 0.174548170477835 0.183309072657237 0.175493977681889 0.178717918206822 0.175944889387784 0.176441217379007 0.178776458288609 0.180061893185827 0.176552064863004 0.181013586880077 0.176194449696100 5 5|0 +|/ 13679384 13682915 13681602.579 13679168 13683245 + gene protein_coding_gene TRUE TRUE AT5G35430.1 binding similar to Os09g0123100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062600.1); similar to CCR4-NOT transcription complex, subunit 10 [Mus musculus] (GB:NP_705813.2); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.347715148602966 3.59876402433368 0.00444151808095242 1 4.19551547606665 8.5205628639098 0.347715148602966 0.089682416798489 AT5G17490_at 1.62730764569344 1.62633298060767 1.67146563855366 1.58121149993507 1.87689078866049 1.86054521247058 1.36675854877097 1.40388561348488 1.21512538157077 1.45781513277109 2.05600361907001 1.82468977060612 1.91385001869641 1.61555612140122 2.10949744192045 2.37501591897052 1.79778068687362 2.04401828656519 1.49891040213556 0.187444641955348 0.188487562045776 0.193946540996298 0.18712284258547 0.186773191008888 0.194371227838252 0.192866226609791 0.190373110064825 0.192414519080219 0.199033436613503 0.190041330791609 0.192866229851731 0.187950763057246 0.190863497523429 0.188405092755856 0.190740415590783 0.19471694494613 0.201856913819302 0.190821907423093 5 5 - 5764332 5764848 5764548.455 5764065 5766079 - gene protein_coding_gene TRUE TRUE AT5G17490.1 RGL3 (RGA-LIKE 3); transcription factor DELLA subfamily member involved in GA signal transduction Identical to DELLA protein RGL3 (RGA-like protein 3) (RGL3) [Arabidopsis Thaliana] (GB:Q9LF53); similar to RGL2 (RGA-LIKE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G03450.1); similar to DELLA protein [Malus x domestica] (GB:AAY56750.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.28802146362893 3.59861954767512 0.00444261828612239 1 4.19529642764725 3.30563396860814 0.28802146362893 0.0171248553452092 AT5G54890_at 4.71738215536674 4.21157100233282 4.5974318467973 5.07449617591816 5.32027765681325 4.91543816189746 4.51325687589302 4.58444221347135 4.2307752928842 4.39115634937079 4.90739401386899 4.90968172946088 4.66710395051962 4.82008986073266 4.48542260767322 5.03156018608993 4.65980681359849 4.69624453973418 4.39186326464677 0.185160957763838 0.18526842424988 0.206484529026252 0.190683893184105 0.196190485296342 0.192406735341130 0.182299614986663 0.185347747844065 0.199344170328123 0.182299614986663 0.187051613238988 0.189458356332084 0.185432455506665 0.182750859828014 0.189627881456031 0.182299614986663 0.190263170356111 0.183405556112857 0.182299614986663 5 5|0 +|/ 22311380 22312051 22311687.6 22310551 22312370 + gene protein_coding_gene TRUE TRUE AT5G54890.1 similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G31010.1); similar to Os08g0188000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061154.1); similar to Protein of unknown function UPF0044 [Medicago truncatula] (GB:ABE81273.1); similar to Os08g0174900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061110.1); contains InterPro domain CRS1/YhbY; (InterPro:IPR001890) -0.42077041262931 -3.59735970893975 0.00445222403265324 1 4.19338622545042 9.2968343102331 -0.42077041262931 0.139778220486608 AT5G49555_at 7.29442323770724 6.75916004519997 7.31448558652508 7.10365142267356 7.13222459154984 7.12231075518096 7.0926753606755 6.35827087074788 7.39494908868752 7.50140401726097 8.44076321238432 8.68986026679255 7.7163304202626 8.08540010901773 7.98541638310845 7.95380699973645 7.97475411312416 8.27374879039833 7.16177765707417 0.166564214158439 0.172710559776942 0.182388470701169 0.171116835539447 0.168615856985961 0.174581506857771 0.169009940598278 0.17755175036723 0.181982665183318 0.172335118854643 0.166564214158439 0.170263481202356 0.167440939775695 0.173700025765676 0.182906605040909 0.171187357519743 0.178508295630095 0.181879631592089 0.170422522357179 5 5|0 -|/ 20124656 20125637 20125167.7 20124455 20127862 - gene protein_coding_gene TRUE TRUE AT5G49555.1 amine oxidase-related similar to CRTISO (carotenoid isomerase), carotenoid isomerase [Arabidopsis thaliana] (TAIR:AT1G06820.1); similar to Os12g0631800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067343.1); similar to LOC495473 protein [Xenopus laevis] (GB:AAH85048.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Phytoene dehydrogenase-related protein; (InterPro:IPR008151); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) -0.456956402745129 -3.59581501365905 0.00446403098070211 1 4.1910438797748 14.7685103793795 -0.456956402745129 0.161452300764377 AT5G09630_at 3.8904982630704 4.40050435695621 4.60783695557294 5.18780146854421 5.56849135376324 5.50985742275744 3.32313592875034 3.60191913913083 3.15843682584201 3.17347387856124 4.27690277805151 3.84429759511850 4.36382490639361 4.15938597744158 3.91323784633492 4.15565802676446 4.61863232412443 4.39643509485001 3.39267318499326 0.219777582695773 0.21677600032151 0.222374992893475 0.21928213078691 0.219717985038475 0.220844535154520 0.220695733963451 0.215943468340823 0.217269668446023 0.216754496482506 0.216599977941991 0.217865223144003 0.221707149412146 0.218683971394048 0.224847192937202 0.218289874672544 0.215943468340823 0.219048123276785 0.21603434472472 5 5 - 2986053 2986508 2986250.273 2985871 2987653 - gene protein_coding_gene TRUE TRUE AT5G09630.1 similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G22690.2); similar to Zinc finger, RING-type; CTLH, C-terminal to LisH motif [Medicago truncatula] (GB:ABE86823.1); similar to Os06g0588900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057959.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain CT11-RanBPM; (InterPro:IPR013144); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 0.424887421565785 3.59522699778691 0.00446853400230908 1 4.19015215574329 8.24004300195172 0.424887421565785 0.142454902276873 AT5G04080_at 7.5782519617505 7.75434386794156 8.79203654828989 8.74527413612552 8.6664966258529 8.68566491221944 8.27591843343323 8.22032774050217 6.937072949694 7.41237300602532 8.89637572317205 8.53701178129718 8.67995973216448 8.71772561498982 8.31376288916853 8.5845554592234 8.98700509288607 8.5301195584793 6.73106393672613 0.120741881409032 0.124737343715351 0.121821153882508 0.125671082069111 0.121257813461342 0.124269232581351 0.121625835169737 0.127238902519578 0.128309375336977 0.128369955626591 0.122624350262988 0.119889335966433 0.121137832666654 0.122803455721647 0.123598663720260 0.121552379370053 0.125706097211382 0.119184365181126 0.136990807281486 5 5|0 +|/ 1104820 1105012 1104948.75 1104706 1105389 + gene protein_coding_gene TRUE TRUE AT5G04080.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87214.1) 0.294487097923585 3.5950592342274 0.00446981959467118 1 4.18989773598919 16.1811148343833 0.294487097923585 0.0331311926618103 AT5G37550_at 1.52141286348631 1.47254392108345 1.99008279814942 1.7640103472921 1.82708123197723 1.80455661072157 2.59828784535733 2.84036610087564 2.15912511857552 2.77514623413935 2.42195381078162 2.10084407936867 2.71370741596922 2.79062734742415 1.95586066587647 2.40031227799506 2.77447354609974 2.45856206720333 2.26781336383023 0.189065881471803 0.194689698605719 0.186762630173835 0.183593511501207 0.183494640989104 0.18829915449943 0.188645384651218 0.193688676954956 0.185973381413044 0.184730906816525 0.188976848652232 0.189128527832632 0.183593312747438 0.186440832541849 0.188766405047321 0.191639386223176 0.186305944725947 0.198022246207365 0.193627837480376 5 5 - 14936331 14936840 14936584 14936131 14937098 - gene protein_coding_gene TRUE TRUE AT5G37550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66190.1) -0.312677981377584 -3.59379155979368 0.00447954629600185 1 4.18797516105976 4.40366149329529 -0.312677981377584 0.0580716807337611 AT5G58375_at 8.44231335671862 8.93685382176418 9.6263147953025 9.56339805657412 9.98512340214437 9.7649849298603 7.89131923352433 8.19673136906599 8.17383377885139 8.20654000644466 9.34054085552739 9.3659289571856 9.36772359595031 9.24583268780061 8.75459244612858 9.3051049194794 9.03826220119531 9.19557342343094 8.36098663794193 0.176614659190972 0.178382594464148 0.179687682813303 0.173287991321281 0.177776793236582 0.185268594837349 0.174056172467669 0.174036863511839 0.187597544761236 0.176976905233299 0.168901779332011 0.170380378391666 0.168083426483113 0.168575669999904 0.181884872047866 0.168083426483113 0.194549320500818 0.174016204657449 0.180718058758016 5 5|0 +|/ 23613595 23613906 23613740.5 23613498 23614186 + gene protein_coding_gene TRUE TRUE AT5G58375.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18150.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96267.1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133:SF1); contains domain UNCHARACTERIZED METHYLTRANSFERASE (PTHR12133) 0.371953434078263 3.59355686744415 0.00448134945719887 1 4.187619203804 17.7752873840776 0.371953434078263 0.108109494692649 AT5G42130_at 5.83431423253286 6.29482147415138 6.16508642638776 6.43724491613463 6.70483629515731 6.60863006262505 6.61032481434946 6.83061282375941 5.71742281309421 5.96114798824063 7.0816719420897 7.62122810100078 7.02525398322221 7.38184126647897 7.61755434737491 7.42227145566628 6.40018985678502 6.42432940579793 5.84409450136183 0.199869437648969 0.185795748395410 0.186649928370105 0.196260803233239 0.186995131939971 0.194155921439975 0.185011046342520 0.189687724198044 0.208839526210516 0.190780778545420 0.190432276593863 0.185765246126273 0.184961345285464 0.197846911608578 0.190025790293481 0.185905843479093 0.205388696244466 0.189931508621368 0.189851034252563 5 5 - 16852802 16853355 16853066.455 16852527 16854067 - gene protein_coding_gene TRUE TRUE AT5G42130.1 mitochondrial substrate carrier family protein similar to SAMC2 (S-adenosylmethionine carrier 2), binding [Arabidopsis thaliana] (TAIR:AT1G34065.1); similar to mitochondrial carrier protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD88246.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.362636477646123 -3.59262623106679 0.00448850699951785 1 4.18620765123761 12.9170743701543 -0.362636477646123 0.101487318429998 AT5G18750_at 5.12407586596229 5.58586796941666 6.35504087633481 6.25468492551945 5.82388866042539 6.10127457932181 3.84267015301333 4.07142550644709 3.7456634553873 3.17217275469623 4.51043440498206 4.76915175438081 4.81264236441474 4.79878331658637 4.27787120113097 4.63183845664766 4.44175952857991 4.69095144892307 3.84033552218430 0.2552246839832 0.251829410252567 0.264058944517168 0.259622492241471 0.259171602596361 0.254211438595233 0.257288814169727 0.248342681394324 0.257778173547466 0.248342681394324 0.251370299084756 0.252882331460022 0.248342681394324 0.253850494977588 0.262615913571617 0.248342681394324 0.262578993169814 0.26468962279131 0.254572859385291 5 5 + 6257243 6257778 6257491.455 6255179 6257934 + gene protein_coding_gene TRUE TRUE AT5G18750.1 DNAJ heat shock N-terminal domain-containing protein similar to heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT3G06340.2); similar to Os06g0535300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057790.1); similar to heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] (GB:ABF69988.1); similar to Os01g0375100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043077.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.364340690274259 3.59223635366746 0.0044915090628593 1 4.18561627263538 9.4962342188276 0.364340690274259 0.102759390653859 AT5G41050_at 6.19076568090309 6.35565129318522 7.0083959935276 6.7304693722956 8.21259017609444 7.62410634857875 8.15466834933305 8.17227178872534 5.93422291656587 7.27513235499624 7.87064685129092 8.32383446249154 7.94437874705862 8.02976018750462 7.9918686902784 8.10530713513284 7.4764044237098 7.31959446452743 7.2453049743485 0.19781928458852 0.186149666684364 0.186936101047944 0.199416358698682 0.186050029544015 0.200152615637799 0.186050029544015 0.193209824455443 0.197068859984351 0.192708976084865 0.186050029544015 0.186050029544015 0.189978686005448 0.187579357508718 0.190647224147864 0.188508388895642 0.186579540507388 0.204298907142563 0.192178004975274 5 5 - 16450760 16451268 16451072.455 16450545 16451546 - gene protein_coding_gene TRUE TRUE AT5G41050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26960.1); similar to Os09g0508200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063620.1); similar to Os12g0472800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066754.1) -0.383335331333679 -3.59000845505762 0.00450870375635394 1 4.1822366081843 14.6565871014401 -0.383335331333679 0.116224415138320 AT5G11420_at 10.3057827006653 10.5253503226010 9.88956802113136 10.0801815039999 10.5098078456919 10.7160524708216 10.7296436554117 11.0919471867037 11.2054542950960 11.0505615162986 12.3818563651278 12.4143764719401 12.1440497549021 12.0412100880720 12.4270675159339 11.7872088316949 11.0657626007551 12.0804184200191 11.3933503648660 0.0774503830495171 0.0783900734304077 0.078957592258155 0.0812252322009844 0.0792304962383807 0.0768195098791724 0.0791822485592485 0.0768195098791724 0.0840595093944763 0.0782901393491778 0.0770891126678008 0.0768195098791724 0.0768195098791724 0.0784877196106908 0.079865719123471 0.0768195098791724 0.0845299478287717 0.0789605712597976 0.0772293290608931 5 5|0 +|/ 3645948 3646964 3646674.9 3644548 3647296 + gene protein_coding_gene TRUE TRUE AT5G11420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25460.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain Protein of unknown function DUF642; (InterPro:IPR006946) -0.344305932944974 -3.58577000959485 0.00454160360117954 1 4.1758055145686 22.1106412874496 -0.344305932944974 0.087959471436448 AT5G67490_at 8.99101437479831 9.06909154907815 9.62832999148237 9.861152741102 9.72027798794025 9.89960465512839 7.83518960880354 8.41409245752212 8.87039569068448 8.04475749823067 9.78633576583284 9.27821714805607 9.27138647686003 9.62163842716865 9.633039136387 9.28992558100189 9.22502873397346 9.47102077584997 8.13945589065646 0.113745444878031 0.115653035721387 0.113416845778592 0.115597617733235 0.115495964404821 0.117169272489858 0.129579611701942 0.118821570590085 0.127116719076579 0.122331296675996 0.113945643556238 0.112946824214349 0.111972420132609 0.114769602637492 0.115665327360407 0.112148807864427 0.115682400146258 0.114826434536339 0.117158342963409 5 5 - 26951597 26951886 26951747.545 26951379 26952178 - gene protein_coding_gene TRUE TRUE AT5G67490.1 similar to Os06g0157800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056861.1); similar to W02D3.12 [Caenorhabditis elegans] (GB:NP_740875.1); contains InterPro domain Protein of unknown function DUF1674; (InterPro:IPR012875) 0.378382962536385 3.58564707292871 0.00454256155707487 1 4.17561895093529 18.0766493534811 0.378382962536385 0.113160951430311 AT5G10690_at 8.28955921112647 8.0096399347501 8.36821468841898 8.39193448100692 8.8630606459463 8.59341817231248 8.41900020050192 8.00763811923163 8.39697318772155 8.78430993535405 9.08559735931704 9.5966408694161 8.98268215862768 9.09278187393091 9.76050354431673 9.534885327561 9.10836336568538 8.91557211745765 8.94941790897006 0.114603169386197 0.112685705366142 0.116305706181486 0.121244973740274 0.114409323528806 0.115935236826669 0.115012451300095 0.117218023817945 0.113114882169128 0.116284589282390 0.114186226975578 0.112222228963106 0.112236912250954 0.112834052816331 0.113793253841572 0.111052476595229 0.124297876333920 0.116078512839524 0.113074828046633 5 0|5 /|- 3374613 3375323 3374940.5 3374394 3377431 - gene protein_coding_gene TRUE TRUE AT5G10690.1 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G12775.1); similar to pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33810.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain CBS; (InterPro:IPR000644) -0.357146200556574 -3.58448967458012 0.00455159055585408 1 4.17386245098289 17.3527391838557 -0.357146200556574 0.098023400645153 AT5G12140_at 10.4134110335227 10.6208053826601 11.1351444172223 11.327048108345 11.4887946816027 11.1052419937064 10.80194104545 10.9208414087944 10.2079101363127 10.3377536326356 11.5859433956220 11.6914528247371 11.4688649318278 11.5259388997703 11.3501375483178 11.5622704743034 11.5103901960602 11.5058599536823 10.1990541594063 0.0916726578763427 0.0876211494031384 0.093175299696575 0.0902521138025685 0.0900591811183407 0.0959894140710162 0.0891935340649943 0.0896993190173339 0.0949573158378016 0.0885192365150732 0.0876438975083633 0.0888805415485421 0.0876211494031384 0.0922828377775202 0.0923575854553533 0.0876211494031384 0.0949319331271126 0.0906770095776904 0.0897496762770502 5 5|0 -|/ 3923296 3923902 3923564.4 3922910 3924024 - gene protein_coding_gene TRUE TRUE AT5G12140.1 ATCYS1 (A. THALIANA CYSTATIN-1); cysteine protease inhibitor Encodes a cystatin. similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.1); similar to phytocystatin [Brassica rapa subsp. pekinensis] (GB:AAQ03209.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 0.340368688162483 3.58292634733063 0.00456381568502250 1 4.17148967328423 21.8633268026588 0.340368688162483 0.0849713208425668 AT5G63870_at 5.49399702611061 5.40728521639875 6.74210263181164 6.80666605898105 7.16497520498112 7.00917949951124 6.018501906904 5.46115384958017 4.73715753048748 4.79921165878318 6.10044333305327 6.06203931822803 6.02065625400283 6.0640416867155 5.75131692709618 6.19269140615357 6.7190913508226 6.05089601751081 4.56542137378606 0.220157118300191 0.221311588929571 0.219403105207994 0.216822973387774 0.212925470822563 0.223036015731072 0.212771629010708 0.218274136889286 0.225257804227288 0.240009817280036 0.2093018201981 0.218516282370606 0.216040769461671 0.214333781107810 0.221927456305097 0.216168154503983 0.217335589164656 0.225322917803298 0.231200964462376 5 5 - 25579192 25579779 25579459.364 25578386 25580500 - gene protein_coding_gene TRUE TRUE AT5G63870.1|AT5G63870.2|AT5G63870.3 PP7 (protein phosphatase 7); protein serine/threonine phosphatase Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G48120.1); similar to Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase [Medicago truncatula] (GB:ABE88824.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.36173793625541 3.57840627341035 0.00459935350397538 1 4.16462774686859 11.6733546198099 0.36173793625541 0.101881519839224 AT5G48655_at 9.10082987324346 9.12119021643866 10.0793601908321 10.1053229444351 10.0778962460718 10.0882247569961 8.90158785167378 9.11645453729257 8.05674232579976 8.33906773421948 9.33432808176234 9.12767367357264 9.33548521280504 9.32081004305177 9.33191558221926 9.31494874985843 9.48531360793631 9.23281204280378 8.33211654119576 0.0916809896626358 0.0926412477869537 0.0930995015549898 0.0936305192358594 0.0934924884832952 0.0943050594409056 0.0980615326563736 0.0936721573233615 0.128507481164227 0.101174808398698 0.0964842971027118 0.0938091821409589 0.09755502412122 0.0934376288252852 0.0920216117131061 0.0942746564216675 0.100766837932562 0.098351941622209 0.103548539187854 5 5 - 19748909 19749634 19749309.545 19748376 19750269 - gene protein_coding_gene TRUE TRUE AT5G48655.1|AT5G48655.2|AT5G48655.3 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G07200.2); similar to Os01g0919500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045211.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08744.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.295507493581812 3.57535570844762 0.00462349910383095 1 4.15999544786991 18.3503848644510 0.295507493581812 0.0376619508851474 AT5G08139_at 6.60517590454953 6.93020791496326 7.5050401836745 7.63533489018483 7.8707422969959 7.35024176396909 6.60436422069498 6.8631555946979 6.3973498754806 6.58340616082425 6.96928109911794 6.73814718532514 7.00733912333993 6.93823776392139 6.76076057282288 7.15457738974333 6.73179112367744 6.99021852156044 6.35592603254187 0.166588451993262 0.166253292746240 0.164354643964904 0.168533452679465 0.17267232078048 0.174353667669201 0.171224136162777 0.162131227522091 0.174618642335037 0.173510203004042 0.177245662599926 0.172945167730383 0.166170731059897 0.173751214333962 0.167589257177980 0.163259222665885 0.186240868258565 0.16466074710567 0.180284323825719 5 5 + 2617034 2617529 2617309.636 2616346 2617879 + gene protein_coding_gene TRUE TRUE AT5G08139.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G60820.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.383472005598026 -3.57453405853688 0.00463002490970483 1 4.15874759853621 13.8489602397433 -0.383472005598026 0.117437233152235 AT5G11300_at 2.14777704262819 1.96655506616292 2.85420080920317 2.51467288233601 2.33695770185321 2.37246008826422 2.01617904985957 1.61136358451035 2.28992843616757 2.73153338949713 3.19355430201807 3.22494489585024 3.18671855602614 2.92404140928117 3.0742370214059 2.73199536979804 2.9867957166424 3.33554975785147 2.19999371697928 0.213688815565320 0.209869235336493 0.213921183296655 0.218310377810400 0.212090410025894 0.209067775722504 0.209393448864512 0.216754865629138 0.217291568888594 0.217225859506700 0.212960078311550 0.211911402030472 0.213701843559567 0.209384252744882 0.211726481127525 0.214349229821113 0.213635755533597 0.212907113452838 0.217150546056071 5 5|0 -|/ 3601838 3603002 3602317.8 3601518 3605260 - gene protein_coding_gene TRUE TRUE AT5G11300.1 CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS); cyclin-dependent protein kinase regulator mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ). similar to CYCA2,1 (CYCLIN A2,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G25380.1); similar to cyclin 2 (GB:AAA90945.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.354317032639071 3.5715790935375 0.00465357288344028 1 4.154259265161 4.9722115161808 0.354317032639071 0.0968575371423204 AT5G53250_at 2.4540081211346 3.05243726465814 3.00751775017467 3.47829484101114 2.71393552300523 2.32188304616184 2.81079497958228 3.05934757363984 3.37440751653818 3.75609332730181 3.5086608839777 3.63506386874161 3.63547771168045 3.6438837186241 3.41324665794743 3.56467895875047 3.74529689190455 3.37786472969407 3.35399801452652 0.232042506629404 0.225364232234348 0.226051731786711 0.238069716750206 0.228668355139325 0.225364232234348 0.227392231245363 0.226974133044242 0.225364232234348 0.232360306723972 0.233648687864957 0.232648273258574 0.227771281149171 0.226248195384799 0.228167237685632 0.228636899027832 0.238513624774421 0.234192014649707 0.226499376350067 5 5 + 21620952 21621209 21621114.727 21620846 21621457 + gene protein_coding_gene TRUE TRUE AT5G53250.1 AGP22/ATAGP22 (ARABINOGALACTAN PROTEINS 22) Identical to Arabinogalactan peptide 22 precursor (AG-peptide 22) (AGP22) [Arabidopsis Thaliana] (GB:Q9FK16); similar to AGP41 [Arabidopsis thaliana] (TAIR:AT5G24105.1); similar to unknown [Capsicum annuum] (GB:AAM12785.1); similar to Os02g0264800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046496.1); similar to Os01g0657000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043758.1); contains InterPro domain Protein of unknown function DUF1070; (InterPro:IPR009424) -0.441399963272000 -3.56871040502193 0.00467655160658966 1 4.14990109194338 6.39245470264791 -0.441399963272000 0.154322853248907 AT5G24000_at 1.97201769692852 2.54543482701388 2.98423789447614 2.91942957744769 3.09762798804496 2.80160135906906 2.42518797066023 2.24450020646576 2.6139567814416 2.93524588966906 3.40407452461917 4.04223547523939 3.05375110947031 3.65420322223768 4.4254925238229 3.63705352460688 3.47933929486608 3.77649043879083 2.73029780129282 0.236168000894399 0.243661367308412 0.228090370635011 0.232511187183366 0.23922311997698 0.244214858170430 0.228090370635011 0.241200317636693 0.248400623012239 0.228581723464270 0.228090370635011 0.228770151613617 0.233007271620302 0.229910039245522 0.24913022396034 0.240312474515495 0.231309722149441 0.235199810507493 0.233553722724388 5 5 - 8110420 8111037 8110731.455 8110316 8112695 - gene protein_coding_gene TRUE TRUE AT5G24000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52540.1); similar to Protein of unknown function DUF819 [Medicago truncatula] (GB:ABE85318.1); contains InterPro domain Protein of unknown function DUF819; (InterPro:IPR008537) 0.381153873968427 3.56562677831756 0.00470138267394609 1 4.14521540942994 5.84571144251719 0.381153873968427 0.116511827642782 AT5G01770_at 4.0818915295839 3.83398978018383 4.9263647355164 4.75591443975364 4.49863045459693 4.79054564206616 4.51302180893653 4.12311374915708 4.25398166951821 4.78557858675645 4.85289472975997 5.31195994078237 4.88737615966466 4.92613207057692 4.68276022220006 5.63559957505401 4.9265690703636 5.3647430326479 4.89580836534092 0.206991280802449 0.201493598010705 0.211355177346498 0.211549963369882 0.201372391759106 0.204595118851600 0.204545618566924 0.204148842424179 0.222375554974814 0.207188589903710 0.21128316784024 0.205005600611987 0.202768595494748 0.212258833675512 0.201132910145851 0.201132910145851 0.215633809921741 0.201132910145851 0.207990240352341 5 5|0 -|/ 294602 295411 294991.9 294536 301770 - gene protein_coding_gene TRUE TRUE AT5G01770.1 RAPTOR1A (RAPTOR2); nucleotide binding Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development. similar to RAPTOR1B (RAPTOR1), nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT3G08850.1); similar to transducin family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21850.1); similar to transducin/WD-40 repeat protein [Oryza sativa (japonica cultivar-group)] (GB:AAR82959.1); similar to WD40-like [Medicago truncatula] (GB:ABE88896.1); contains InterPro domain Regulatory associated protein of TOR; (InterPro:IPR004083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.3566405290552 -3.56539761632088 0.00470323343688863 1 4.14486714941872 9.29974762947583 -0.3566405290552 0.099073054814024 AT5G53860_at 8.86754822631694 8.90517295836607 8.96135009503269 9.00084061839408 9.74980937172846 9.30859395453477 8.96375296241023 9.0569926483864 8.81202592021771 9.33827643949369 9.64341384435284 9.73640840148801 9.46379285934688 9.46968633553242 10.0196904481486 9.58518639650686 9.42746817875424 9.42837896109 9.06147679170299 0.141622041591007 0.129766513669410 0.138030390906345 0.137151998697731 0.128197268621909 0.138393952797011 0.130393431959645 0.129026242281352 0.133284299482804 0.129110477769417 0.136006786360737 0.131815912231137 0.129178496158673 0.131750991952847 0.12804170199584 0.128303152823783 0.136701961141630 0.128490427408333 0.125669560373824 5 5|0 +|/ 21884422 21885574 21885110 21882494 21886068 + gene protein_coding_gene TRUE TRUE AT5G53860.1|AT5G53860.2|AT5G53860.3 EMB2737 (EMBRYO DEFECTIVE 2737) |contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) -0.330700462817114 -3.55960705689332 0.00475024967655536 1 4.13606533951409 18.4354307187082 -0.330700462817114 0.0786094605907215 AT5G48580_at 8.05569113626969 8.31239524176712 8.62238393078008 8.53343214007113 8.57649461879178 8.53093228375064 8.16185340367692 8.23763724606657 8.5587298507331 8.09440085863159 9.09254543231248 9.31841899537955 8.92930161266357 9.01754526014436 9.29528637481429 8.7954198253331 8.35644525890948 9.03103162558983 8.17466876255737 0.146592341900014 0.145354854644125 0.143157909803527 0.145189139640594 0.142322369934294 0.152200499115432 0.139292373185704 0.149170259321259 0.153404267781581 0.146267700496621 0.146041001926129 0.139577337870330 0.151086754544621 0.146313037713821 0.149592872011246 0.138918601868388 0.144766747273155 0.141328337888295 0.149928321439010 5 5|0 -|/ 19713455 19714498 19713831.111 19713155 19714551 - gene protein_coding_gene TRUE TRUE AT5G48580.1 FKBP15-2 (FK506-binding protein 15 kD-2); FK506 binding / peptidyl-prolyl cis-trans isomerase immunophilin (FKBP15-2) Identical to FK506-binding protein 2-2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-2) (FKBP15-2) [Arabidopsis Thaliana] (GB:Q38936;GB:Q9FJL2); similar to FKBP15-1 (FK506-binding protein 15 kD-1), FK506 binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25220.1); similar to immunophilin (GB:AAC49391.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) -0.302437720561362 -3.55952911025771 0.00475088585948356 1 4.13594683448059 17.0065687278721 -0.302437720561362 0.0494429428077414 AT5G67160_at 3.74038979389861 3.75241533081438 5.44026155341205 5.44252292656001 4.19000982475825 4.24610713045333 4.84465193025572 5.6443131492897 4.04169847808362 4.30690658343074 4.51268107716058 5.07439270587161 4.82533762199463 5.05109099826338 4.6422916336944 5.14746179819741 4.40295026401599 4.5751718409029 4.31172511258213 0.256782690401535 0.255373362103672 0.260563897159419 0.258258039077064 0.251221373345436 0.251221373345436 0.268466513919478 0.251221373345436 0.256896369160116 0.251221373345436 0.251221373345436 0.251500023357012 0.251221373345436 0.272306664597913 0.251221373345436 0.251515875368795 0.265023759028915 0.262250687203299 0.252850004423211 5 5 - 26814981 26815452 26815212.909 26814839 26816267 - gene protein_coding_gene TRUE TRUE AT5G67160.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G67150.1); similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus x domestica] (GB:AAV50009.1); similar to Transferase family [Medicago truncatula] (GB:ABE88091.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.414670920010654 -3.55944266360595 0.00475159152046122 1 4.13581540582726 9.16210010520264 -0.414670920010654 0.138741357212214 AT5G12410_at 6.95112753654277 7.28896192304552 7.75264476702465 7.93009985171874 8.09834587739025 8.06232843024127 7.03822402382874 7.28002017153228 5.1385617051986 5.81995196885276 5.68951398576137 7.1213191417839 6.70608703184457 5.93415760304447 6.59636188626989 6.22784163082195 6.66806107011399 6.0344861265493 6.36052169420801 0.220983610990880 0.220983610990880 0.221693906209761 0.229143652092925 0.222955577844789 0.232321159079483 0.22718106811548 0.228035034130072 0.25175911574701 0.230494111311966 0.242080742967493 0.222675126465699 0.221778832642504 0.228266905779178 0.229850522373199 0.220983610990880 0.229022676735322 0.229829261157720 0.221040405248927 5 5|0 -|/ 4022179 4022668 4022413.2 4021816 4023989 - gene protein_coding_gene TRUE TRUE AT5G12410.1 THUMP domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47970.1); similar to Os11g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068115.1); similar to THUMP domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22531.1); contains InterPro domain THUMP; (InterPro:IPR004114) -0.330356362854738 -3.55813205072116 0.00476230326753592 1 4.13382272751541 13.6228392471373 -0.330356362854738 0.0784273757294958 AT5G66550_at 5.00508802711885 5.01624792561499 4.9177945267113 5.32434635120731 5.97061701790094 5.31933945118847 5.99759267009945 5.51468439461147 4.67970536532321 4.93603858683684 5.75434190935143 6.58912140222521 6.01208808637956 6.16087157287672 5.93177742751413 5.8688570784935 5.21627483178893 5.89827627782312 4.99872405391627 0.267637747657957 0.258614217338932 0.275493771393531 0.287024574313791 0.266109346940361 0.266875007337292 0.267347527813805 0.268883465716097 0.262790126407582 0.266914729373740 0.258614217338932 0.265580603133835 0.264413383775353 0.258614217338932 0.276484484311355 0.265387030382068 0.27564930304028 0.271305006680403 0.269130984809309 5 0|5 /|- 26577007 26578226 26577559.375 26576810 26578442 - gene protein_coding_gene TRUE TRUE AT5G66550.1 Maf family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42770.1); similar to Maf-like protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94173.1); contains InterPro domain Maf-like protein; (InterPro:IPR003697) -0.444400176794997 -3.55690341321691 0.00477236765249425 1 4.13195452290557 10.7834339998893 -0.444400176794997 0.156972294769613 AT5G47610_at 4.02176386443413 5.45697602477953 5.43579928323283 5.62444270347367 5.53453377528014 6.18284078183444 5.69974308018033 7.29730314471944 4.88374622738847 5.35746330337452 4.34150886718311 4.88192610813388 6.40411220005662 4.84969506716637 3.91739101304657 5.49476566583829 5.93726561035606 5.38314665546976 4.98988454518509 0.259399721962838 0.252158039306663 0.255357789683423 0.258873928589196 0.265381071114783 0.257437049663949 0.252111758882737 0.256436658805306 0.259155130139819 0.260559037663528 0.250595649210296 0.251088929513325 0.255995222863496 0.265157299297968 0.254572678349161 0.253343996520347 0.263087337757454 0.257599802380464 0.260621965785729 5 5 - 19318628 19319062 19318845.273 19318414 19319139 - gene protein_coding_gene TRUE TRUE AT5G47610.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5M precursor (ATL5M) [Arabidopsis Thaliana] (GB:Q9FGJ6); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G17245.1); similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea] (GB:ABD64996.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.897472208316857 -3.55670459373145 0.00477399834439868 1 4.13165219314139 10.7708042107697 -0.897472208316857 0.38958138867803 AT5G41400_at 5.26118698743198 5.93692010290292 8.60019907950317 9.15659603536803 6.41342771557969 7.96905573214135 4.28116729704292 6.04894991544519 4.0664611183018 3.99793528327612 4.62254874303357 5.37980068524327 5.50012711012613 5.60670639800749 5.90743508210711 5.5862303784059 6.52378760276215 4.54300743530293 4.27624335205360 0.263443807744727 0.251384073585393 0.256774138199807 0.254480375714725 0.254287490052006 0.260948704637159 0.263861375187037 0.255368283865248 0.261511780280838 0.252360711210839 0.256752715292166 0.253969467904291 0.251651670029582 0.264722236321779 0.250322842496303 0.250322842496303 0.26095222468334 0.26259063369512 0.250322842496303 5 5 - 16586873 16587315 16587086.909 16586605 16587405 - gene protein_coding_gene TRUE TRUE AT5G41400.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G63840.1); similar to Os02g0681200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047745.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABD28706.1); similar to Os04g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053644.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.991505572743204 3.55591174379685 0.00478050691776741 1 4.13044652515085 11.4945638651356 0.991505572743204 0.434750609090885 AT5G65520_at 3.36919223752400 3.90286588563419 3.82425959131656 3.87223552998565 4.76158426580186 4.71882522416395 3.29916657417656 3.39320929241469 2.65403338648619 2.52882251647643 4.36080004851607 4.16612819268382 4.12160833836630 3.83943144935474 3.97366554586139 4.02458822373857 4.02155063680999 2.93182260305047 3.10174616598501 0.221793477673791 0.223789573979547 0.223883570425027 0.223638890625619 0.224437124700965 0.230857907058354 0.224513431739257 0.22105641475799 0.231547186843438 0.220261444625744 0.225144568057598 0.219547883891856 0.219547883891856 0.219753417972448 0.226912834829299 0.219547883891856 0.223311091311202 0.226204872760613 0.22586453812484 5 5 - 26207107 26207628 26207396.091 26206951 26207817 - gene protein_coding_gene TRUE TRUE AT5G65520.1 binding similar to Os02g0204000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046241.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.349563144500123 3.55544846251759 0.00478431427101103 1 4.12974199401087 7.23840902651729 0.349563144500123 0.0944348410108389 AT5G62480_at 3.10525803538396 3.13527613347812 3.22615868387023 3.53051145645982 2.81128603013335 2.47172133769393 1.35341436536491 0.972048653922366 1.28199705791610 1.22746638500341 1.42145201926527 1.13669044939526 0.898468419584897 1.11175338353996 1.26068388642791 0.963909897303028 1.35395069267869 1.32239764222967 0.605986602825841 0.339819566368334 0.347570566678036 0.324856758900145 0.323267751136054 0.310773468020203 0.322095168968749 0.310773468020203 0.315597318304026 0.310773468020203 0.312757034104292 0.314317270977229 0.318816860868209 0.311970208544706 0.310773468020203 0.314605908024478 0.31343994230831 0.319916505190499 0.31233886815222 0.324383670325433 5 5|0 -|/ 25106008 25106644 25106321.6 25105920 25106846 - gene protein_coding_gene TRUE TRUE AT5G62480.1|AT5G62480.2 ATGSTU9 (GLUTATHIONE S-TRANSFERASE TAU 9); glutathione transferase Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTU10 (Arabidopsis thaliana Glutathione S-transferase (class tau) 10), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G74590.1); similar to glutathione S-transferase GST 12 [Glycine max] (GB:AAG34802.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.360941304568365 3.55543360824052 0.0047844363986672 1 4.12971940412278 3.68678266073077 0.360941304568365 0.103003973806267 AT5G57480_at 3.38839178511343 3.42398793672884 4.51415806680443 4.22282463670132 3.55772002513389 3.18212598482061 3.26982180661881 2.94484537331363 3.11960203582313 3.67534011220865 2.91872747411363 3.7446334065036 3.43019841216451 3.02241794849325 2.94114889758463 3.08589210654326 3.77245788484919 3.32932251730492 3.52153456428672 0.180527867513951 0.186591391682773 0.190221908124513 0.193534361688285 0.178876971701029 0.178339581531618 0.176197436295086 0.176197436295086 0.192415124316406 0.185656432050301 0.185487532214901 0.176197436295086 0.181965728271424 0.176197436295086 0.189535886490649 0.181453732592693 0.187447047690268 0.176197436295086 0.180249912777037 5 5 - 23296819 23297204 23297028.455 23296632 23298194 - gene protein_coding_gene TRUE TRUE AT5G57480.1 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G30250.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G25835.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE78645.1); similar to Os09g0432300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063240.1); contains InterPro domain Globin-like; (InterPro:IPR009050); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.356019896637985 -3.54902467979733 0.00483743003340807 1 4.11997077974867 6.9226971527631 -0.356019896637985 0.0998366167447017 AT5G06640_at 2.17303400892373 2.11246255464460 2.22149624387728 2.73276069610862 2.28817192277904 2.81389686549458 2.79765293331028 2.38201725279498 2.69947807729257 3.2208845759208 2.6256348442455 2.84538902488369 2.41408095136256 2.33486628540667 2.37315304877683 2.44105609517275 3.07825044975242 2.72155627053009 3.03012936574949 0.255846655794182 0.267370286432751 0.267249708436378 0.262685765934152 0.256070798323443 0.276880387742360 0.256110892703441 0.267946177219656 0.267042968762102 0.260830435125265 0.255994633865174 0.257178099461916 0.261809984678595 0.270728204214202 0.255846655794182 0.262755602557311 0.281163164818544 0.261728277349087 0.265013806231456 5 5 - 2039893 2040416 2040096.7 2039860 2041929 - gene protein_coding_gene TRUE TRUE AT5G06640.1 proline-rich extensin-like family protein similar to ATHRGP1 (ATHRGP1), structural constituent of cell wall [Arabidopsis thaliana] (TAIR:AT3G54590.1); similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT4G08410.1); similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT3G28550.1); similar to Extensin-like re (GB:ABD65126.1); similar to extensin, putative [Brassica oleracea] (GB:ABD65124.1); similar to hydroxyproline-rich glycoprotein precursor (GB:AAA87902.1); contains InterPro domain Extensin-like region; (InterPro:IPR006706) -0.425586277243124 -3.54891296003374 0.00483835916416342 1 4.11980080498141 5.23405941520194 -0.425586277243124 0.146249107175383 AT5G04320_at 3.16777483639112 3.0399279899728 3.72054830798005 3.53740665915731 3.45140970272799 3.69417322890303 2.5395926701463 2.49007532472714 2.77230340731680 2.98552388415023 3.56728677678327 4.57710242246303 3.66794031877165 3.56285445418186 4.29702983733209 3.76221227430298 3.13004241766385 3.5977888566585 2.96386176057900 0.202714669403498 0.199828193674006 0.201796200627452 0.200029970754098 0.196266401411505 0.202236715032868 0.207005636025016 0.201849387833587 0.198792560657984 0.202402188119568 0.196854857965533 0.200672177830160 0.197633280116284 0.205522496127888 0.206804211237462 0.198894670734839 0.205213310781284 0.200943835590523 0.195580515938015 5 0|5 /|+ 1211539 1212312 1211987.667 1209198 1212577 + gene protein_coding_gene TRUE TRUE AT5G04320.1|AT5G04320.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10440.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD36062.1); contains InterPro domain Shugoshin, C-terminal; (InterPro:IPR011515) 0.308116330891556 3.54490091587666 0.00487184811216156 1 4.11369587137113 6.54386951689322 0.308116330891556 0.0577265787942198 AT5G17890_at 4.85256794114218 4.95697176454576 5.11707985025331 5.29387631760841 6.24109624956563 5.51985928011159 4.31029330988343 4.09821841861107 5.06072017595021 4.63532133463797 5.10246899227856 5.46022605817637 5.00044299413794 4.74579890669538 4.50572628626983 4.89321393284576 4.49765129399169 4.99952626450853 4.87504600286568 0.237282336538065 0.235353583134094 0.250288465983298 0.237588052105832 0.241908265460708 0.23735747792049 0.238627333446996 0.244815136158994 0.24374957348074 0.247383017431664 0.235094378764314 0.233410713289959 0.235220521843473 0.238012981120415 0.24372873200731 0.237076047540399 0.248138584101459 0.238020021826407 0.239966167914473 5 0|5 /|+ 5922537 5923122 5922908.111 5916972 5923350 + gene protein_coding_gene TRUE TRUE AT5G17890.1 LIM domain-containing protein / disease resistance protein-related similar to SLH1 (sensitive to low humidity 1) [Arabidopsis thaliana] (TAIR:AT5G45260.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os03g0626600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050702.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.40655301437975 -3.54251640776863 0.00489186504111482 1 4.11006669484107 9.92757589759732 -0.40655301437975 0.134862297251856 AT5G61760_at 7.37344705550127 7.2781799594008 8.2530292912056 8.34515450516325 8.02266207718457 7.7857629890974 7.11257215524124 7.23376227483328 5.07586555341618 6.56333652665189 7.68061571529847 7.90382928591466 7.79643809147489 7.18372791842606 7.40595408319798 7.67920897092245 7.9508576441168 7.4720144777175 5.906650370376 0.194092741731599 0.197259454147022 0.199656969665316 0.193331394174619 0.196532962592028 0.192982633273572 0.189920362380217 0.194958019601152 0.227382372345977 0.19450317521522 0.189920362380217 0.193991090736894 0.193470904974804 0.195378584842191 0.189920362380217 0.189920362380217 0.194220661545009 0.200909536227465 0.205127285961211 5 5 - 24831142 24831711 24831381.455 24830955 24832669 - gene protein_coding_gene TRUE TRUE AT5G61760.1 ATIPK2BETA (Arabidopsis thaliana inositol hexakisphosphate 2beta); inositol or phosphatidylinositol kinase Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2). similar to IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G07370.4); similar to putative inositol polyphosphate kinase [Thellun (GB:ABL11220.1); contains InterPro domain Inositol polyphosphate kinase; (InterPro:IPR005522) 0.302312044619831 3.53938624900047 0.00491827022597459 1 4.10530176592635 14.4169204168859 0.302312044619831 0.0514444386571155 AT5G51890_at 2.64172978287548 3.26618030476408 1.86919710083371 2.35697479188684 3.01476003235706 3.32925670122201 3.66300609382585 3.78992299133168 4.06125217687531 2.82741066292508 3.89125222686392 6.01839600688635 3.99430461054774 3.79172186666109 6.27332835908977 3.7575918622093 3.13067416638362 3.9686181125757 3.22429184936527 0.276805033525864 0.284597701758398 0.298660807614219 0.31067626546746 0.276028508951368 0.290842502169336 0.273437807511525 0.279305868177799 0.308809751405097 0.274228402338417 0.280787638639812 0.290868451102273 0.280485172691168 0.274720483952605 0.28744357201101 0.273437807511525 0.296400807142792 0.279521645008274 0.275968897700535 5 5|0 -|/ 21108389 21109078 21108708.2 21108218 21109631 - gene protein_coding_gene TRUE TRUE AT5G51890.1 peroxidase encodes peroxidase involved in the lignification of tracheary elements (TE) in roots Identical to Peroxidase 66 precursor (EC 1.11.1.7) (Atperox P66) (ATP27a) (PER66) [Arabidopsis Thaliana] (GB:Q9LT91;GB:P93727); similar to peroxidase 64 (PER64) (P64) (PRXR4) [Arabidopsis thaliana] (TAIR:AT5G42180.1); similar to cationic peroxidase [Zinnia elegans] (GB:BAD93164.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.429012182443727 -3.53776271994849 0.00493202373396529 1 4.10282993054834 6.85348887378246 -0.429012182443727 0.149156816016287 AT5G43610_at 1.95799886379415 1.94591435538794 2.25662783960047 2.56513816653085 1.87216356477917 1.92096686056136 2.30832285384403 1.69563882998306 2.69538352024005 2.67076866778181 1.703208850187 2.16437340629401 1.92702137194399 2.1647888406148 2.17131776557042 2.00348204988949 2.00313317376728 2.87135071521457 2.55473562388232 0.198457438269201 0.192108192503923 0.204206658455044 0.206007704742032 0.198984796806333 0.204916408022960 0.192108192503923 0.194350945566764 0.198656449975957 0.194023041107797 0.203188507875064 0.198276656914191 0.198613299796384 0.192479908123111 0.203670862855480 0.194069568676085 0.205773876661362 0.201803014965224 0.196705713541968 5 5 + 17537275 17538211 17537996.091 17536306 17538235 + gene protein_coding_gene TRUE TRUE AT5G43610.1 ATSUC6 (SUCROSE-PROTON SYMPORTER 6); carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter Identical to Probable sucrose transport protein SUC6 (Sucrose permease 6) (Sucrose- proton symporter 6) (SUC6) [Arabidopsis Thaliana] (GB:Q6A329;GB:Q9FIX9); similar to ATSUC9 (SUCROSE-PROTON SYMPORTER 9), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G06170.1); similar to ATSUC8 (SUCROSE-PROTON SYMPORTER 8), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT2G14670.1); similar to ATSUC7 (SUCROSE-PROTON SYMPORTER 7), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G66570.1); similar to sucrose transporter SUC2 [Brassica oleracea] (GB:AAL58072.1); similar to sucrose carrier [Ricinus communis] (GB:CAA83436.1); similar to sucrose transporter SUC1 [Brassica oleracea] (GB:AAL58071.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Sucrose/H+ symporter, plant; (InterPro:IPR005989); contains InterPro domain Sucrose/H+ symporter; (InterPro:IPR013002) -0.381124544422681 -3.53088548154353 0.00499072461105107 1 4.09235630340667 4.44853664630342 -0.381124544422681 0.119029424729021 AT5G65450_at 4.92302838352529 4.37243469971214 4.80874431595033 4.24617200762066 5.82223077885249 5.12680511142422 4.37052967920438 4.25725230255925 4.77170435139588 4.86076749542037 5.25970639188531 5.4646724070849 4.65575695462151 5.08706940374682 4.79515367869833 5.37781100594528 4.75371088214002 4.77862999625412 4.51241999287629 0.203521223197404 0.196046022952162 0.193812339691193 0.194916151517748 0.193889072216325 0.195884549055878 0.191455724045279 0.195229237703071 0.198021226292790 0.200362425088285 0.196219000968160 0.195462811244264 0.194711284049907 0.196424581937158 0.206520955881789 0.193998496404699 0.197633531089938 0.195010151476076 0.191681657703428 5 5|0 +|/ 26177606 26178189 26177937.6 26175089 26178322 + gene protein_coding_gene TRUE TRUE AT5G65450.1 ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein similar to UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16), ubiquitin-specific protease [Arabidopsis thaliana] (TAIR:AT4G24560.1); similar to Os08g0478500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062051.1); similar to putative ubiquitin-specific protease [Oryza sativa (japonica cultivar-group)] (GB:BAD33960.1); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) -0.485608267529468 -3.52939999728353 0.00500349833776187 1 4.09009336821214 9.6091635531617 -0.485608267529468 0.182823847524725 AT5G42440_at 3.97741266411730 4.03531035308415 5.10995313031314 4.9971779253137 4.70573885566111 4.96574727110008 3.09108143609615 2.6864646894917 3.37590380348572 2.64665188383802 3.40011022445099 3.6371277115101 3.45854238373172 3.69285167877978 3.25052307072038 3.47809610333586 4.05521357888107 3.33778627307688 3.02936072637301 0.223311784045774 0.221470702494261 0.234790229694161 0.245337926250319 0.241932126912773 0.225600641418101 0.231781964487359 0.222549255055736 0.221571704993725 0.229674017045281 0.221148466743020 0.223342046704953 0.227569481476793 0.223104174211929 0.223001507220792 0.221822128055924 0.226793455453801 0.221673660511017 0.221452127692086 5 5 - 16990837 16991190 16991030 16990532 16991802 - gene protein_coding_gene TRUE TRUE AT5G42440.1 protein kinase family protein similar to ATPSKR1 (PHYTOSULFOKIN RECEPTOR 1), ATP binding / peptide receptor/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G02220.1); similar to Serine/threonine protein kinase, active site [Medicago truncatula] (GB:ABE86024.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.335955290658685 3.52257505059074 0.00506262089505361 1 4.07969361948591 7.47415421529371 0.335955290658685 0.0860743831861362 AT5G35840_at 6.74448333560132 6.63959016831285 7.84806068928726 7.71314117436341 8.2110162571726 7.98983184777523 6.73875745886192 6.54938343247316 6.24408752536704 6.64606907149694 7.99324288970346 7.95467974356462 7.88638793368834 7.68582223583143 7.84956301851185 8.12482130610908 8.01843712901147 7.13786959333309 6.49284389192044 0.196490723706885 0.190542354770811 0.194302577192615 0.202837898016875 0.19443836156409 0.224366099931145 0.199661591561629 0.193632693746773 0.226409596638596 0.203307737942107 0.19988233919072 0.197577258328123 0.192007377546984 0.201428711779683 0.189200650946034 0.196284908124402 0.210526935653618 0.202373303446810 0.201967377846520 5 5 + 14028167 14028822 14028535.818 14025056 14028994 + gene protein_coding_gene TRUE TRUE AT5G35840.1 PHYC (PHYTOCHROME DEFECTIVE C) Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development. Identical to Phytochrome C (PHYC) [Arabidopsis Thaliana] (GB:P14714); similar to PHYA (PHYTOCHROME A), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT1G09570.1); similar to PHYD (PHYTOCHROME DEFECTIVE D), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT4G16250.1); similar to PHYB (PHYTOCHROME B), G-protein coupled photoreceptor/ signal transducer [Arabidopsis thaliana] (TAIR:AT2G18790.1); similar to phytochrome C [Oryza sativa] (GB:AAF66603.1); similar to phytochrome F [Lycopersicon esculentum] (GB:AAC49301.2); similar to phytochrome C [Triticum aestivum] (GB:AAU06208.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Phytochrome, central region; (InterPro:IPR013515); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain PAS fold-2; (InterPro:IPR013654); contains InterPro domain GAF; (InterPro:IPR003018); contains InterPro domain Phytochrome; (InterPro:IPR001294); contains InterPro domain Phytochrome A/B/C/D/E; (InterPro:IPR012129); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain PAS fold; (InterPro:IPR013767); contains InterPro domain Phytochrome chromophore binding site; (InterPro:IPR013516) 0.306610065709114 3.52040588014279 0.00508156223862055 1 4.07638729072140 14.4504596175546 0.306610065709114 0.0584276516689336 AT5G22850_at 7.84151972118504 7.89001910842086 8.85319298408792 9.31371610134398 9.57728825956925 9.24536038490746 7.75946582678746 7.81173043130318 7.36453659809862 7.68530367998063 8.6496714745709 8.32839489929058 8.60296863292681 8.78595189709167 8.56095428138849 8.85404173140134 8.67350674586109 8.6739269444745 7.84512991788912 0.153617224549440 0.144384691616253 0.157620272926384 0.149505960640397 0.150212401896367 0.149818845251214 0.160014912680927 0.152223901146533 0.170362136825365 0.16736419524258 0.149750131428095 0.146302339982252 0.146765184913107 0.146555907944367 0.154623984311492 0.148675099660128 0.161456215325822 0.147891007212541 0.151779874540509 5 5|0 -|/ 7633615 7634552 7634000 7633440 7636570 - gene protein_coding_gene TRUE TRUE AT5G22850.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G08210.1); similar to putative aspartic proteinase nepenthesin II [Oryza sativa (japonica cultivar-group)] (GB:BAD53242.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.351796204616307 3.51778397694722 0.00510455441583818 1 4.07239026200147 16.6729535061332 0.351796204616307 0.0990110802662752 AT5G24620_at 9.1835734106976 8.71349278400015 9.99661943799665 9.7409461583383 10.1294877831242 9.7651047848529 8.90532651004365 8.658533260454 8.19988232405213 8.60469195513236 9.65209035382933 9.62525167745244 9.86351011977342 9.85297184395518 9.43730867934344 10.0447426556302 9.90137797008742 9.83747918098402 8.93446230314224 0.0919512628517273 0.0953188836958022 0.0906726643694051 0.0938593742597932 0.0929884868650195 0.0914757096515584 0.0906726643694051 0.102747074418706 0.110327949926811 0.100865177314365 0.0945807127381979 0.0906726643694051 0.0906726643694051 0.0935673328861844 0.105861126907105 0.0906726643694051 0.0934879143057931 0.0939976740003711 0.0944677788719119 5 5 + 8431099 8431652 8431349.273 8430771 8432417 + gene protein_coding_gene TRUE TRUE AT5G24620.1 thaumatin-like protein, putative similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT4G36010.2); similar to putative pathogenesis-related protein [Oryza sativa (japonica cultivar-group)] (GB:BAC57321.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 0.380182472626261 3.51034406257504 0.0051703825846887 1 4.06104456560817 18.5648957266422 0.380182472626261 0.119899097535533 AT5G13730_at 8.94814166282739 8.87831449402219 8.84431445623869 8.72540224416751 9.93367410126111 9.41767468141902 9.02253389601635 8.8664505580502 8.74865880078018 9.56477862011679 9.60075175530296 9.69984050059022 9.85367404154369 9.70396866532144 9.84566721061897 10.0782014716536 9.71051781429414 9.1116718738787 9.32834216646019 0.111880481114757 0.107903242753747 0.111165821936884 0.114502016105578 0.112363310099111 0.111110838239321 0.107903242753747 0.113023112448486 0.123245694936654 0.107903242753747 0.109491562661476 0.107903242753747 0.109039497156446 0.111667301869291 0.109684558474682 0.109936983091159 0.120603482078672 0.126387885661047 0.111560714744174 5 5|0 -|/ 4429262 4429956 4429520.7 4429113 4430840 - gene protein_coding_gene TRUE TRUE AT5G13730.1 SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity. similar to SIGB (SIGMA FACTOR B), DNA binding / DNA-directed RNA polymerase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G08540.1); similar to PpSIG2 [Physcomitrella patens] (GB:BAB21618.1); contains InterPro domain Sigma-70 region 4; (InterPro:IPR007630); contains InterPro domain Sigma-70 region 3; (InterPro:IPR007624); contains InterPro domain Sigma-70 factor; (InterPro:IPR000943); contains InterPro domain Sigma-70 region 2; (InterPro:IPR007627); contains InterPro domain Sigma factor, region 2; (InterPro:IPR013325); contains InterPro domain Sigma factor, regions 3 and 4; (InterPro:IPR013324) -0.347359411683998 -3.50876512915458 0.00518446511277356 1 4.0586360236846 18.5367948596351 -0.347359411683998 0.096295763059282 AT5G40730_at 5.92463192169328 6.2062195326398 7.22499002106407 7.13412979140797 8.2289282393122 7.76475392379551 5.45076925969004 5.67699133291303 6.10122188412832 5.46481722074678 6.78040463724182 6.0940985292262 6.78684675066912 6.86946646401887 6.11523849523766 6.87878585053131 6.70526628928845 6.86349417651259 5.25705518633214 0.206672527722633 0.206494870496001 0.214725384721207 0.212935189845793 0.209184583096122 0.203892260774623 0.206833713343336 0.208618252751736 0.206178517418198 0.207356295497450 0.202231252961927 0.216628156861790 0.210208522319115 0.215125578483509 0.205342922054191 0.202928090888247 0.220399359182516 0.207567570520244 0.204956952126546 5 5 + 16318395 16318565 16318466.455 16318303 16318748 + gene protein_coding_gene TRUE TRUE AT5G40730.1 AGP24 (ARABINOGALACTAN PROTEIN 24) Encodes an arabinogalactan-protein (AGP24). Identical to Arabinogalactan peptide 24 precursor (AG-peptide 24) (AGP24) [Arabidopsis Thaliana] (GB:Q5PP12;GB:Q8LE23) 0.355221516007627 3.49927237621205 0.00526996818646191 1 4.04415039196023 12.8236258758944 0.355221516007627 0.102990264685297 AT5G59820_at 4.69295644746006 4.68083617711059 6.64671173431441 7.21420286884543 4.32363367110681 4.88110858272856 3.12979200507326 3.29595767790858 2.88941582975785 2.53864158485957 3.00101977785886 3.26829920146008 3.17224221611162 2.64156780631423 2.93990654463055 2.81302892957448 3.10001874706399 3.34281389092106 2.44186814121949 0.256247848128728 0.261404850525193 0.272614126544460 0.289059300273029 0.258779536694527 0.25893431047606 0.250241965670666 0.256267421182483 0.250241965670666 0.250241965670666 0.257828934538948 0.258039254270371 0.253540612588076 0.255358388438739 0.251429305025803 0.250241965670666 0.250241965670666 0.255446560870761 0.258739045876385 5 5 + 24120320 24120665 24120488.273 24120198 24121013 + gene protein_coding_gene TRUE TRUE AT5G59820.1 RHL41 (RESPONSIVE TO HIGH LIGHT 41); nucleic acid binding / transcription factor/ zinc ion binding Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G46080.1); similar to C2H2-type zinc finger protein [Brassica napus] (GB:ABB52061.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.410442881024284 3.49724129688225 0.00528845039954482 1 4.04104988725437 7.68723522449554 0.410442881024284 0.140652289587037 AT5G08510_at 3.87669234083726 3.95622142866356 4.14453090573463 4.15104293803569 4.53240698926514 4.44076691152619 3.7547350796176 3.8854638423103 3.33435614455007 3.52494359329017 3.81981490319442 3.43690862949512 3.42735106986635 4.24664304575865 3.57356853276803 3.88701393957444 3.28545174701447 3.95058942437541 3.14791117033344 0.203204520727072 0.192909869910344 0.207919135539099 0.197154889944378 0.205255164113706 0.209462108078778 0.201263247991733 0.194522254685666 0.202083560579909 0.192909869910344 0.193481120757901 0.196124510507808 0.192909869910344 0.198039415800529 0.197815944193471 0.199372370371649 0.204851742395346 0.197793571399430 0.201118214206763 5 5 + 2754133 2754689 2754349.273 2753100 2755117 + gene protein_coding_gene TRUE TRUE AT5G08510.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G44230.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAA90805.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.285090268446014 -3.4945166482224 0.00531334879151744 1 4.03688999835983 7.61230986994734 -0.285090268446014 0.0308868377108827 AT5G09810_at 11.2579368840036 11.5271429520119 11.8237120728754 12.2126441891491 12.0074727985711 11.8071301042757 11.4122162989497 11.7103621088822 11.4882828156382 11.3400513028924 12.7072346754022 12.610466928628 12.7224400949739 12.6950550172624 12.6821902195812 12.4891215775139 12.2620709423327 12.5110259855057 11.1758243217843 0.0682616110437223 0.064964675167461 0.0688357467874557 0.0676902327773503 0.0652611606259225 0.0728426082234057 0.0660517643403546 0.0663709612658879 0.0703371380080902 0.0653000798556006 0.0694964787135872 0.0641081246940138 0.0641081246940138 0.0703464648813046 0.067598855024775 0.0647721916214135 0.0695041435503548 0.06493005411946 0.06609340304351 5 5 + 3053529 3054017 3053783.091 3052098 3054615 + gene protein_coding_gene TRUE TRUE AT5G09810.1 ACT7 (actin 7) Member of Actin gene family.Mutants are defective in germination and root growth. Identical to Actin-7 (Actin-2) (ACT7) [Arabidopsis Thaliana] (GB:P53492;GB:P53495); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.2); similar to actin [Brassica napus] (GB:AAD03741.1); similar to actin [Isatis tinctoria] (GB:AAW63030.1); similar to actin [Malva pusilla] (GB:AAD41039.1); contains InterPro domain Actin; (InterPro:IPR004001); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 0.354433558284865 3.4942238385513 0.00531603172049553 1 4.03644290498001 23.6796622562173 0.354433558284865 0.102784595991496 AT5G65290_at 4.80177615853756 4.91073446822269 5.96930531733362 5.60146190832637 5.77765140652621 5.63235186748487 3.78234596675228 3.98180625348349 4.1541524243474 3.69749062118618 4.71711539205949 5.48991193289207 4.79955162393555 4.9266051762141 5.18959799486288 4.89959800393214 4.5876882842747 5.21388786785331 3.91680365177787 0.236468037562583 0.241219158179811 0.242774372237928 0.249568342980855 0.257165398271557 0.240899087274252 0.239778470689883 0.256240921877738 0.260049322643313 0.240934365310653 0.237920092787532 0.236468037562583 0.241417316079176 0.236468037562583 0.242173206252498 0.241130812300077 0.245877995347543 0.247793098194813 0.242664376999792 5 5 + 26110891 26111513 26111226.545 26106782 26111774 + gene protein_coding_gene TRUE TRUE AT5G65290.1|AT5G65290.2 LMBR1 integral membrane family protein similar to Os02g0758100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048176.1); similar to LMBR1-like conserved re (GB:ABE91808.1); similar to Os06g0218900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057160.1); contains InterPro domain LMBR1-like conserved region; (InterPro:IPR006876) 0.324841013032223 3.49255976354300 0.00533130566877347 1 4.03390185830488 9.50758421847014 0.324841013032223 0.0789396865875952 AT5G35200_at 8.05524320347933 8.06856871974242 8.7809792170492 8.89227922073858 8.94733256432547 8.72634251267656 6.81689755231912 6.79209842550879 7.79007489649643 6.94013550114515 8.47471502372463 8.54981570248076 8.54547099763395 8.372193795285 8.28049620685558 8.48564067311198 7.95174966435927 8.47950555984497 7.41381649538434 0.151782574685809 0.143580456763497 0.150771012208796 0.143798581778768 0.155467637226198 0.151858562906782 0.146588891269766 0.151409915799944 0.143636449187450 0.166244503528700 0.145859131464787 0.148779511201888 0.151436686478958 0.151296856900969 0.143580456763497 0.144765212715331 0.149341513340118 0.143580456763497 0.151569276088573 5 0|5 /|- 13479718 13480412 13480029.111 13479392 13483281 - gene protein_coding_gene TRUE TRUE AT5G35200.1 epsin N-terminal homology (ENTH) domain-containing protein Identical to Putative clathrin assembly protein At5g35200 [Arabidopsis Thaliana] (GB:Q9LHS0); similar to epsin N-terminal homology (ENTH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G01600.1); similar to Os02g0803300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048425.1); similar to Carbamoyl-phosphate synthase L chain, ATP-binding; ANTH [Medicago truncatula] (GB:ABE84582.1); similar to Os06g0175500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056950.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain ANTH; (InterPro:IPR011417); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) 0.292084479830345 3.49179367044030 0.00533835254832594 1 4.03273194228544 16.0218630522736 0.292084479830345 0.04309612221437 AT5G04760_at 6.90230720034486 7.34677462368429 8.84080023532043 8.92803716137058 9.11289474468678 8.77162104154368 7.26595749501187 7.77359104590106 5.9655103676127 6.30895061659562 7.10186322354885 6.48098815973861 7.5631797651193 7.27053354518261 6.37997613446546 7.73762822287458 7.96684607826014 7.18287763569069 5.7626247987378 0.196855640737524 0.191545445975522 0.188501304834313 0.194718332891466 0.195042075973327 0.202177176041071 0.192538232478743 0.201131661873565 0.20093622891559 0.191576273345167 0.188501304834313 0.195794275512393 0.192595804226447 0.195784749307606 0.192607006868886 0.188501304834313 0.190617170376696 0.188694488487303 0.197490768673096 5 5 - 1373774 1374458 1374097.455 1373531 1374736 - gene protein_coding_gene TRUE TRUE AT5G04760.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G08520.1); similar to syringolide-induced protein 1-3-1A [Glycine max] (GB:BAB86892.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.395627379613807 3.48955753510308 0.00535897646961815 1 4.02931677183016 14.7291722051123 0.395627379613807 0.131717352873210 AT5G02040_at 7.00129388596302 6.88386460425297 8.23431897649513 7.84331921169905 8.35820082846822 7.92258200012227 6.33634658883385 5.99021389408687 5.9231954364871 5.32304429044533 6.26180611705768 6.622513514497 7.06622625715243 6.77049321719358 6.91089143351722 6.78309531489215 7.16113159802238 6.90781093143407 5.27897781612449 0.196228055241508 0.196663480827681 0.204448291751292 0.196868022289858 0.20224291312838 0.209747441886208 0.198547218302623 0.206945130704931 0.206448213974591 0.209553510249966 0.194725901991830 0.191992166037672 0.198202368868298 0.202597371074408 0.207534949673675 0.191992166037672 0.211417635047023 0.203553285098033 0.206210017137549 5 5|0 +|/ 401288 402210 401872.125 400896 402948 + gene protein_coding_gene TRUE TRUE AT5G02040.1|AT5G02040.2 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT5G05987.1); similar to Os05g0455600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055724.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82667.1); similar to Os01g0847900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044801.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) 0.376606274615863 3.48369229314495 0.00541346244272691 1 4.02035671291527 13.4807184465684 0.376606274615863 0.119425531080282 AT5G60780_at 1.00113232106579 0.920437418088814 1.31837544320238 0.889460840959655 0.78866935380803 0.513287029970934 0.908212402689761 1.02534466263324 1.73795700604645 1.47592926479476 0.901351999740198 1.03926696716332 1.09879134656980 1.24323340910635 1.15887060635468 0.787428194488737 1.08189818095571 1.09144354190606 1.27849346280982 0.19503032383412 0.179126428961854 0.188947745420366 0.179118620624939 0.178042321939594 0.179992905381111 0.184264794369193 0.179959057936899 0.185524580613513 0.183106041068799 0.192957645563720 0.178467125437951 0.184961869626152 0.200380866896499 0.187468887533863 0.178042321939594 0.178042321939594 0.192893606263452 0.191930841399618 5 5 + 24469405 24469932 24469618.273 24468065 24469982 + gene protein_coding_gene TRUE TRUE AT5G60780.1 ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3); nitrate transporter member of High affinity nitrate transporter family similar to ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1), nitrate transporter [Arabidopsis thaliana] (TAIR:AT1G08090.1); similar to ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4), nitrate transporter [Arabidopsis thaliana] (TAIR:AT5G60770.1); similar to ATNRT2.6 (Arabidopsis thaliana high affinity nitrate transporter 2.6), nitrate transporter [Arabidopsis thaliana] (TAIR:AT3G45060.1); similar to putative high affinity nitrate transporter; GmNRT2 [Glycine max] (GB:AAC09320.1); similar to high-affinity nitrate transporter [Prunus persica] (GB:BAD04063.1); similar to high-affinity nitrate transporter [Prunus persica] (GB:BAD02939.1); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.338488793474430 -3.47915810138706 0.00545597412547673 1 4.01342778564707 2.19448765505363 -0.338488793474430 0.0915776101130968 AT5G65490_at 4.25640111023303 4.8818665479212 5.08885668170143 5.41881972078034 6.07154479019584 5.58887865713498 4.48483690324295 4.72284013227709 4.35744797356593 4.63480812266188 4.41340836487697 4.43331098842128 4.74502665451218 4.24978159567753 4.54902667260289 5.48825359159054 5.34772257351519 4.70581690661366 5.19233536525284 0.231807612638073 0.231311808841018 0.240037946711096 0.234261993285522 0.230986871662410 0.237060963903124 0.230898414313868 0.227031340451086 0.234847214217001 0.236663940184716 0.227632000971718 0.236067195987001 0.229675948685247 0.246461440460569 0.231317813225131 0.228108438325152 0.227031340451086 0.227031340451086 0.235757336101071 5 5 - 26195241 26196086 26195549.273 26195026 26197542 - gene protein_coding_gene TRUE TRUE AT5G65490.1 Identical to SGT1 protein homolog At5g65490 [Arabidopsis Thaliana] (GB:Q9LSM5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to suppressor-like protein [Lycopersicon esculentum] (GB:AAK84474.1); contains InterPro domain SGT1; (InterPro:IPR010770) -0.429019135028267 -3.47574056814258 0.00548824326779409 1 4.00820399056857 9.79912585408744 -0.429019135028267 0.153784630841175 AT5G23840_at 1.63990901452325 1.39587469407189 1.71874880764291 1.61750556020196 1.07019246648013 1.12813240964514 1.81655055329454 1.44778768435133 2.03473052840080 1.82676855306782 1.66037501439000 1.74235714378655 1.73547651730864 2.06583182123856 1.65711221051219 1.86406098006274 1.48544333705516 1.84957444611660 2.03929650774046 0.192930648457266 0.200104479260288 0.195543365019742 0.194662563397702 0.192538748481830 0.195191252434932 0.194297045282082 0.191379299250503 0.195156303968895 0.191837041213194 0.195030654070042 0.194749877766462 0.193744838574858 0.193257896281292 0.191510543643537 0.197671907733083 0.197451068383846 0.194438260925666 0.195908981850777 5 5|0 +|/ 8036189 8036675 8036440.6 8035770 8036985 + gene protein_coding_gene TRUE TRUE AT5G23840.1|AT5G23840.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23820.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) -0.323420269160263 -3.47485465157938 0.00549664031691817 1 4.00684966207364 3.34156804721564 -0.323420269160263 0.0791422013492386 AT5G13810_at 9.52167751141142 10.0356741315146 10.9297775333426 11.0709168166180 11.0336043774202 10.9156927819694 10.1887442335052 10.3335204564946 10.1081857065066 9.9697200601827 11.1659243599422 10.8264180953971 10.8471792923074 11.0534533934522 10.7123731194302 11.1571612506356 10.8766061717487 11.0660487238099 9.90446245989954 0.0948238048887327 0.09004063544746 0.0921286301919616 0.0957818994771225 0.089735426871478 0.0927376341469911 0.0926617389499396 0.0893672362350845 0.0975576761128471 0.093283610722814 0.0893672362350845 0.089746504843285 0.0911371153967376 0.0928034917310352 0.0911724021336546 0.0893672362350845 0.0996855601311139 0.0917234555183775 0.0899094261033659 5 5 + 4456004 4456567 4456240.182 4455336 4457022 + gene protein_coding_gene TRUE TRUE AT5G13810.1 glutaredoxin family protein similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT3G57070.1); similar to Thioredoxin fold [Medicago truncatula] (GB:ABE87618.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.345770671979242 3.47402008712069 0.00550456272768034 1 4.00557376941987 20.9823351268028 0.345770671979242 0.0977377629971988 AT5G49060_at 3.53870382093056 3.93134250111614 4.59599631510735 4.90833030491442 5.25082720589090 4.96182587834655 3.66768545613577 3.59308228208762 3.44166272192598 2.99667470457241 4.06288595063514 4.33925513339078 4.33384809950262 4.30237486017147 4.29997744893715 3.9746738916865 4.19075525506043 3.7989494090405 3.23689312728013 0.277907514997290 0.272009147035605 0.285260575123083 0.285266244262484 0.282006406243597 0.287033234345209 0.280643567502895 0.274917819562133 0.293310276000198 0.281757656543663 0.278048979506514 0.272009147035605 0.272773528320379 0.273852233512744 0.280174040845232 0.272009147035605 0.301164695937367 0.280052691487559 0.278509245526617 5 5 + 19904616 19904997 19904835.818 19903724 19905689 + gene protein_coding_gene TRUE TRUE AT5G49060.1 DNAJ heat shock N-terminal domain-containing protein Identical to Chaperone protein dnaJ 49 (AtJ49) (AtDjC49) (ATJ49) [Arabidopsis Thaliana] (GB:Q9FH28;GB:Q67XE5); similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57340.2); similar to Os05g0364500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055322.1); similar to dnaJ-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89081.1); similar to Os01g0556400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043324.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.349999059770863 3.47344353979890 0.00551004267891 1 4.00469229827439 7.99993264922245 0.349999059770863 0.101026736039124 AT5G66620_at 2.81822904559067 2.68995352773235 3.56905271650488 3.46352003412592 2.56732749481026 2.81900455842376 2.77221626420795 2.65671625732490 3.16129196397764 3.21900574278981 2.87381639997585 3.07494460414701 3.01820200849347 2.84160296586099 2.68831143009243 2.98525615508086 2.71519775246810 3.03989100074098 2.75045449503692 0.178412080223343 0.181827816650842 0.183024815094672 0.180358032928174 0.184059397817183 0.176615934898641 0.183175244026509 0.179065567362398 0.182957248125852 0.179329815416638 0.174530185152824 0.179253787611842 0.180537689667892 0.183487623806758 0.183908480910543 0.178438985003525 0.175665458377829 0.179398555632683 0.187012449703871 5 5|0 +|/ 26608400 26609208 26608730.8 26605811 26609232 + gene protein_coding_gene TRUE TRUE AT5G66620.1 LIM domain-containing protein similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G66630.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781); contains InterPro domain Ubiquitin interacting motif; (InterPro:IPR003903) -0.300210236799287 -3.47219658808645 0.00552191388377596 1 4.00278575284845 5.89362091577788 -0.300210236799287 0.0558817469341109 AT5G07540_at 2.27376215426804 2.22117370371202 2.66150083384952 2.25864185458925 2.33151578504422 2.14883040955273 2.10255156739691 2.10283913732743 3.07046365048118 3.02486638616173 2.80248973105902 2.49275222078544 2.50429446536545 2.47297342297907 2.52213233258654 2.54920500008488 2.76241011362044 2.76318761267248 2.50647698955537 0.212277865281984 0.207468719951582 0.212210934102476 0.211927434838559 0.208800365312833 0.208689889847914 0.205561898649935 0.211332668677331 0.204361188024869 0.208954621800732 0.219591062975939 0.203927348699028 0.213026734388888 0.212133641762665 0.210365711328673 0.212240057411594 0.213206810361544 0.203927348699028 0.212613575428944 5 5 - 2386215 2387016 2386716.182 2386014 2387250 - gene protein_coding_gene TRUE TRUE AT5G07540.1|AT5G07540.2 GRP16 (Glycine rich protein 16); nutrient reservoir encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). similar to GRP17 (Glycine rich protein 17) [Arabidopsis thaliana] (TAIR:AT5G07530.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15461.1); contains InterPro domain Eggshell protein; (InterPro:IPR002952); contains InterPro domain Oleosin; (InterPro:IPR000136)|similar to GRP17 (Glycine rich protein 17) [Arabidopsis thaliana] (TAIR:AT5G07530.1); similar to pollen specific glycine-rich protein GRP16 [Boechera drummondii] (GB:AAQ56113.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15461.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.320666263178566 -3.46963566203553 0.00554637697314392 1 3.99886972866999 5.00057674128098 -0.320666263178566 0.0770889926633191 AT5G43680_at 3.22686348115041 3.22003183424774 3.97015326494145 3.94888072188025 4.04848064032006 3.51353437068408 3.04461868038954 2.88299866991749 3.16299645802016 2.76068899484165 4.14559902726122 4.16028669681776 4.05227770840175 4.67815509404794 4.15385588818003 3.97420068278975 3.7327917410927 3.57141028918134 2.95037496440215 0.211845855022053 0.208474299264927 0.212722271959256 0.211396816170145 0.219320212834162 0.211224183890674 0.215645626015475 0.210293930071733 0.215755183748068 0.211761582124557 0.210752883229840 0.210268437232195 0.212172813307614 0.218173375284731 0.210126760433041 0.211557352504524 0.222586914308971 0.212081246920028 0.218468164442661 5 5|0 +|/ 17561790 17562605 17562208.4 17561256 17562979 + gene protein_coding_gene TRUE TRUE AT5G43680.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94193.2) 0.343944652964177 3.46795904325512 0.005562453157659 1 3.99630560455756 6.99024134797115 0.343944652964177 0.0967850242672528 AT5G07100_at 8.92236882978776 8.7965684138408 9.86008480134342 9.84406440508685 10.7096554085407 10.4219834236506 6.55480139236794 5.70621823222204 5.77646369708398 5.82473977676415 5.44764563835993 3.82122644757945 5.96803659966977 6.56104856197169 3.51179662039011 5.92142336607706 8.14866801516948 5.68605549098671 4.73831315968485 0.248443997073175 0.247251127536066 0.24997517059204 0.252010442149586 0.256029768096625 0.25202035657637 0.254127495631699 0.24474119383409 0.253135073854525 0.252078181092861 0.252303439279266 0.268639690337782 0.244881137712436 0.24474119383409 0.258171232308559 0.24474119383409 0.249576534916996 0.248699447765417 0.265724156441241 5 5 + 2204873 2205592 2205113.364 2204249 2205812 + gene protein_coding_gene TRUE TRUE AT5G07100.1|AT5G07100.2 WRKY26 (WRKY DNA-binding protein 26); transcription factor Encodes WRKY DNA-binding protein 26 (WRKY26). Identical to Probable WRKY transcription factor 26 (WRKY DNA-binding protein 26) (SPF1-like protein) (WRKY26) [Arabidopsis Thaliana] (GB:Q9C5T3;GB:Q8GYK8;GB:Q9LYQ5); similar to WRKY33 (WRKY DNA-binding protein 33), transcription factor [Arabidopsis thaliana] (TAIR:AT2G38470.1); similar to SPF1 protein [Ipomoea batatas] (GB:BAA06278.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)|Identical to Probable WRKY transcription factor 26 (WRKY DNA-binding protein 26) (SPF1-like protein) (WRKY26) [Arabidopsis Thaliana] (GB:Q9C5T3;GB:Q8GYK8;GB:Q9LYQ5); similar to WRKY33 (WRKY DNA-binding protein 33), transcription factor [Arabidopsis thaliana] (TAIR:AT2G38470.1); similar to WRKY3 [Nicotiana attenuata] (GB:AAS13439.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.432602919662903 3.46731293022964 0.00556866117642819 1 3.99531740637849 14.3918396818733 0.432602919662903 0.156605478180412 AT5G17660_at 3.44511662718293 3.53528907844464 3.98066801682813 3.54931581228933 4.63547619067338 3.93528292905636 5.02004828863099 5.08977446681637 3.95004549034324 4.2032273128771 4.92287506851947 5.47358983462955 5.21788323869561 5.30477773956216 5.11762358532069 5.7137036494607 4.74030826385642 5.12392531404598 4.20813308119338 0.240694928510921 0.242027203386467 0.246419074724958 0.240604525081152 0.245153178246948 0.244913601503229 0.245305429140216 0.243460241907130 0.283692999964733 0.241640706835807 0.240844230554018 0.240033202790321 0.237568600290234 0.238192599265088 0.254116905515677 0.241920769433693 0.260686786170204 0.253229673684883 0.242081296643111 5 5|0 -|/ 5818835 5820128 5819374 5818550 5820866 - gene protein_coding_gene TRUE TRUE AT5G17660.1 methyltransferase similar to methyltransferase [Arabidopsis thaliana] (TAIR:AT5G24840.1); similar to tRNA (guanine-N(7)-)-methyltransferase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87719.1); similar to Os01g0535900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043258.1); contains InterPro domain Putative methyltransferase; (InterPro:IPR003358); contains InterPro domain Conserved hypothetical protein 91; (InterPro:IPR004395); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) -0.41161871034672 -3.46654563890508 0.00557604276883725 1 3.99414382130422 8.81002365868988 -0.41161871034672 0.143679997420397 AT5G56900_at 5.72531719106656 6.03205809177568 6.88920241128758 6.90167892880873 7.91570400998298 7.39869739192165 5.97214794022037 5.59732574346684 5.21873555290991 5.26893366487311 7.27989130790725 6.92636385037349 7.07596271601773 6.58234605304059 5.96455633999185 6.99736129579153 7.0995215067145 6.56523088423199 5.7368819601359 0.257381767536182 0.243391009428790 0.265780891541858 0.264378525386259 0.252375546931773 0.251334076619887 0.255087745522753 0.247683659734391 0.249461589828627 0.253866472060380 0.249167711266311 0.243360557322165 0.242581309743049 0.257920644464698 0.250501188548063 0.246568961390978 0.245546496685400 0.266155499466010 0.255918538664415 5 5|0 -|/ 23037381 23037971 23037710.667 23036552 23039896 - gene protein_coding_gene TRUE TRUE AT5G56900.1|AT5G56900.2 CwfJ-like family protein / zinc finger (CCCH-type) family protein similar to CwfJ-like family protein [Arabidopsis thaliana] (TAIR:AT1G56290.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_783052.1); similar to Os09g0364000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062997.1); contains InterPro domain Protein similar to CwfJ, C-terminal 1; (InterPro:IPR006768); contains InterPro domain Protein similar to CwfJ, C-terminal 2; (InterPro:IPR006767); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571)|similar to CwfJ-like family protein [Arabidopsis thaliana] (TAIR:AT1G56290.1); similar to PREDICTED: similar to CWF19-like 1, cell cycle control isoform 1 [Canis familiaris] (GB:XP_534991.2); similar to Os09g0364000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062997.1); contains InterPro domain Protein similar to CwfJ, C-terminal 1; (InterPro:IPR006768); contains InterPro domain Protein similar to CwfJ, C-terminal 2; (InterPro:IPR006767); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.378873336375476 3.4616847371647 0.00562304074540811 1 3.98670771622683 12.6638104486821 0.378873336375476 0.122616668597473 AT5G13550_at 6.88603487319792 6.55452613246692 7.0458807145138 7.30005182673529 7.18208651583269 6.4269158218117 6.74481554427417 6.15332644505909 5.35063276651207 6.27960557040013 6.45167487765117 6.21544156943838 6.02424932838715 6.70202864799937 6.00085037717166 6.42390215024091 6.67204004533533 6.54035130587504 5.28078988781164 0.194611656745554 0.193442702680971 0.199493732306728 0.195816036333483 0.203702780937310 0.196696469571354 0.197756518111179 0.194493792514981 0.195051079426490 0.203673287175753 0.197288673692921 0.194227759026694 0.195514189516065 0.196530516384941 0.196673612148843 0.192959476442488 0.204973435988983 0.190510457594709 0.203101115292252 5 5|0 -|/ 4355440 4356166 4355736.6 4355279 4359555 - gene protein_coding_gene TRUE TRUE AT5G13550.1 SULTR4;1 (Sulfate transporter 4.1); sulfate transporter Encodes a sulfate transporter. Identical to Sulfate transporter 4.1, chloroplast precursor (AST82) (SULTR4;1) [Arabidopsis Thaliana] (GB:Q9FY46;GB:O22123;GB:Q8GW68;GB:Q9FNB8); similar to SULTR4,2 (sulfate transporter 4,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G12520.1); similar to sulfate transporter [Brassica napus] (GB:CAC94921.1); similar to At3g12520-like protein [Boechera stricta] (GB:ABB89769.1); similar to sulfate transporter [Brassica oleracea var. acephala] (GB:CAD87011.2); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) -0.472991742098731 -3.45996349499349 0.00563978024496942 1 3.98407407061095 12.7946180822383 -0.472991742098731 0.181058778491806 AT5G50810_at 6.63875037567657 7.39879227941964 7.40907945150249 7.61453781593778 7.5799544167372 7.53121528816387 6.74850967377974 7.42528759602898 6.94996216349394 6.91350984175244 7.53869897817897 7.77546931265363 7.20460025615315 7.46280787191544 8.0370748158224 7.76108249597415 7.23964486837 7.65099058090381 7.10953305234455 0.182529693437149 0.187609570419772 0.184319127861695 0.183699484726770 0.180048334317095 0.193885588574142 0.190289138805959 0.198885574984367 0.198232330271650 0.186555805260342 0.178610085511813 0.178174414087822 0.187283523151187 0.179650754323261 0.185861928953535 0.185007937953255 0.192497874937638 0.185646663002074 0.182761174462756 5 5|0 -|/ 20693103 20693705 20693234 20692860 20693838 - gene protein_coding_gene TRUE TRUE AT5G50810.1 TIM8 (Arabidopsis thaliana translocase inner membrane subunit 8); protein translocase Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Identical to Mitochondrial import inner membrane translocase subunit Tim8 (TIM8) [Arabidopsis Thaliana] (GB:Q9XGY4); similar to TIM13 (TIM13), protein translocase [Arabidopsis thaliana] (TAIR:AT1G61570.1); similar to small zinc finger-like protein [Malus x domestica] (GB:AAD39991.1); contains InterPro domain Zinc finger, Tim10/DDP-type; (InterPro:IPR004217) -0.470916804840693 -3.45987027572772 0.00564068828718299 1 3.98393142945372 14.5806647788358 -0.470916804840693 0.179867051430593 AT5G42470_at 6.7240320900168 6.70880011618804 7.8959780682894 7.92399392806912 8.02246181846404 7.94982360010477 6.2768336429736 6.10637627985018 5.93194138897416 5.78830145124826 7.35638487357697 7.04774452374517 6.71597590901028 7.2678653105089 7.20523977023648 7.51084403606034 7.35873520450959 7.27679407291736 6.49852113111898 0.218008296681350 0.203952601439227 0.211370184603850 0.218895401476316 0.213166152771445 0.215041573549620 0.208342800360485 0.216070277808902 0.232101225147674 0.209574417063388 0.209158858459499 0.210700859874501 0.203967527576930 0.218736705576950 0.215044866729520 0.210654188844346 0.213446623028391 0.203952601439227 0.226697147823457 5 5|0 +|/ 17000730 17001941 17001525.429 16999533 17002112 + gene protein_coding_gene TRUE TRUE AT5G42470.1 similar to Os06g0715600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058586.1); similar to MGC83547 protein [Xenopus laevis] (GB:AAH73095.1); contains InterPro domain Brain and reproductive organ-expressed; (InterPro:IPR010358) 0.283083568198244 3.45965425710583 0.00564279308731601 1 3.98360088153878 13.8462220861700 0.283083568198244 0.0325365433816244 AT5G37530_at 2.67398892114299 2.33103097693673 2.39046072521156 2.7144327198962 2.10323629658560 2.25819160893992 2.44964859353836 2.59968169950643 2.42121451193732 2.32784372153454 2.43602073784121 2.54850695077977 2.49459145289089 2.26120082568833 2.16489087822289 2.54117252067273 2.51789917240779 2.06371429237394 2.41224193960163 0.198778597359738 0.198369054248826 0.203309719864437 0.207849762072526 0.211535114709756 0.200228580305752 0.214809732732551 0.199943307584480 0.200668916352472 0.203995464480047 0.200215408320167 0.20194798009769 0.207063441805900 0.198369054248826 0.201918641738191 0.202062784072344 0.206924283790468 0.202767384336885 0.200682945024654 5 5|0 +|/ 14925208 14925990 14925480.333 14923689 14926407 + gene protein_coding_gene TRUE TRUE AT5G37530.1|AT5G37530.2 thiF family protein similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.1); similar to thiF family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45738.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594) -0.334299669538376 -3.45879539956278 0.00565116945149408 1 3.98228663012524 4.82288377349515 -0.334299669538376 0.0897716938628038 AT5G01410_at 10.3401178272863 10.4711416169610 11.1790345314560 11.1737851382752 10.9900380974073 10.8422075318976 11.4711135448952 11.5903705962316 10.6613764246652 11.0906799457452 11.3521262919888 11.2680812934353 11.5068939973430 11.4706226302840 10.7106731028070 11.6436473453137 11.458399332752 11.2871413387863 10.7602256165918 0.096883599035792 0.0971513708256758 0.102720223357566 0.0948109803571322 0.0934248108986243 0.101449361936011 0.0976238767535156 0.100177013818075 0.104139855646283 0.0939216868925688 0.0968833229947118 0.0947261941720548 0.0934248108986243 0.0997096329336738 0.0968590454488386 0.0985597773881599 0.099014811135354 0.094916399563973 0.0974023628767732 5 5 - 172579 173124 172866.727 172317 173613 - gene protein_coding_gene TRUE TRUE AT5G01410.1 PDX1 (PYRIDOXINE BIOSYNTHESIS 1.3); protein heterodimerization/ protein homodimerization Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. Identical to Pyridoxal biosynthesis protein PDX1.3 (AtPDX1.3) (AtPDX1;1) (PDX13) [Arabidopsis Thaliana] (GB:Q8L940;GB:Q3KRU4;GB:Q9M032); similar to ATPDX1.1 (PYRIDOXINE BIOSYNTHESIS 1.1), protein heterodimerization [Arabidopsis thaliana] (TAIR:AT2G38230.1); similar to Probable pyridoxin biosynthesis protein ER1 (PDX1 homolog) (Ethylene-inducible protein HEVER) (GB:Q39963); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain Vitamin B6 biosynthesis protein; (InterPro:IPR001852) -0.287043208927906 -3.45606745442374 0.00567785980420027 1 3.97811178976755 22.0945388583460 -0.287043208927906 0.0399418674187261 AT5G51640_at 7.25155442293688 7.71251797380821 9.08878561362229 9.05408541546275 9.03995697232696 8.91856786698315 7.21610624045471 6.85658814808146 6.65368858717508 6.26694761612286 7.47366640788511 7.23006689914571 7.59372272648672 7.3451284564747 7.06743097991932 7.62557938477238 7.81275891318304 7.57437632594483 6.83887601535494 0.225257012224490 0.221556341195158 0.224492661686369 0.223686796498753 0.223137866515111 0.223318344916697 0.229598970183366 0.22636598694691 0.229013380641655 0.227652942019004 0.219759613647240 0.221774813171364 0.217809768064691 0.217468651661055 0.222087202358345 0.216402421134320 0.220910962478320 0.224852152066947 0.233926053681697 5 5 - 20992631 20993105 20992875.455 20992406 20994851 - gene protein_coding_gene TRUE TRUE AT5G51640.1 YLS7 (yellow-leaf-specific gene 7) Encodes leaf-senescence-related protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25360.2); similar to unknown [Gymnadenia conopsea] (GB:ABD66519.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.351143381226761 3.45246979514271 0.00571325788452725 1 3.97260489559446 15.1681929990149 0.351143381226761 0.103497695666490 AT5G63780_at 10.4297628245186 10.3900489681660 11.0341998369971 11.0471535462051 10.6310685911058 10.5567769559132 11.1403200132327 11.2298712782393 10.3427769325964 10.6401338675680 10.8091768276768 10.4772812988642 11.253875841594 11.1913287048395 10.5436640677446 11.4220699858616 11.4399836830537 11.1971861303888 10.2724961961510 0.0811788625087364 0.0806129815473406 0.0818851600240893 0.0778434896220206 0.0773937513490767 0.0813573914866817 0.0834495119246514 0.0773937513490767 0.088582708414137 0.0817308421494642 0.0773937513490767 0.0773937513490767 0.0773937513490767 0.080052775651179 0.080355598443796 0.0773937513490767 0.0924578826384667 0.0773937513490767 0.0779562502404564 5 5 + 25542988 25543394 25543170 25541071 25543819 + gene protein_coding_gene TRUE TRUE AT5G63780.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G08750.2); similar to zinc finger protein [Brassica rapa] (GB:ABK56014.1); similar to OSJNBb0020J19.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE05784.2); similar to Os04g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054367.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.27744335576922 -3.44975392507602 0.0057401301637236 1 3.96844696130639 21.5375451599346 -0.27744335576922 0.0213942498945863 AT5G17410_at 2.06860204727682 2.12390029038741 2.81401967781328 2.80061898598922 4.14023547512529 3.27226072468147 2.8634212083937 2.26128938279933 2.70705547882813 2.78990520524813 4.1662264635911 3.98657568027844 4.03365460599267 3.56360397706131 3.87408473743164 3.83044815377270 3.11112661778951 3.62078443008475 3.05159264078222 0.235590932021389 0.231008493975086 0.236078001930065 0.232291821051387 0.237135309645156 0.258379655653183 0.245446052140650 0.233489903185973 0.243284148161962 0.238167169926104 0.231051377887791 0.242422385239856 0.231137111706909 0.236348905052633 0.241335001427479 0.231008493975086 0.235090430286245 0.247169907370282 0.240601378744406 5 5 + 5734904 5736383 5735771.364 5730612 5736697 + gene protein_coding_gene TRUE TRUE AT5G17410.1|AT5G17410.2 tubulin family protein similar to SPC98 (SPINDLE POLE BODY COMPONENT 98) [Arabidopsis thaliana] (TAIR:AT5G06680.1); similar to H0311C03.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67553.1); similar to OSJNBa0029H02.26 [Oryza sativa (japonica cultivar-group)] (GB:CAE01638.1); similar to Os04g0501700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053231.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) 0.475063992438615 3.44957757622456 0.00574187954216493 1 3.96817695203277 6.10445890315986 0.475063992438615 0.183076816299568 AT5G56610_at 4.85584578428449 4.77900127117552 6.18531599164999 5.94183966143723 5.46035854484948 4.69107176137291 3.58961251717873 2.98428136811912 3.34428968839525 2.98527374078803 4.25703058121483 4.49593900360638 4.10776545044274 3.56050691233625 4.12362428057386 3.66082065366466 4.38170546849435 4.1085807163516 2.99017842865956 0.277034969622722 0.253375312121332 0.250708576011192 0.253150044389228 0.255154878791699 0.255499049614315 0.253283361752143 0.258891173007985 0.284342700387193 0.262472297444761 0.270598221854118 0.251633483106822 0.246935883551551 0.267919492240131 0.259023271506122 0.246935883551551 0.249332906324423 0.256138832217012 0.250909386404902 5 5|0 +|/ 22934076 22935108 22934785.25 22933936 22935564 + gene protein_coding_gene TRUE TRUE AT5G56610.1|AT5G56610.2 dual specificity protein phosphatase family protein|protein tyrosine/serine/threonine phosphatase similar to dual specificity protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G35680.1); similar to dual specificity protein phosphatase family protein [Musa balbisiana] (GB:ABF70116.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387)|similar to dual specificity protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G35680.1); similar to Os01g0739200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044194.1); similar to dual specificity protein phosphatase family protein [Musa balbisiana] (GB:ABF70116.1); similar to Os05g0524200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056088.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387) 0.461102903315147 3.44821498658195 0.00575541491357157 1 3.96609058364737 8.4077044888167 0.461102903315147 0.175068871975531 AT5G11810_at 9.04512134336156 9.08877629579844 9.64747362574794 9.70886899644704 9.92067569501737 9.43423890389285 8.3367606491062 8.5095915717551 8.43740774462748 8.49697904139155 9.59838002460502 9.5637910461702 9.3474742249007 9.6777916689658 9.71307579665294 9.52474204539232 9.01194199214985 9.51867470999679 7.72447616786909 0.126765649490113 0.11998192152748 0.123735974304956 0.120747961890278 0.119237925135304 0.129020983886587 0.130371624002864 0.124275207384738 0.134738411090791 0.124417292193610 0.118614498755413 0.119276766344376 0.117060464826494 0.117060464826494 0.120665494317045 0.118204875167848 0.135677019314122 0.129075432891855 0.141480571046794 5 5|0 +|/ 3809683 3810372 3809981.222 3808721 3810749 + gene protein_coding_gene TRUE TRUE AT5G11810.1 similar to Os02g0135600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045818.1) 0.333894958848536 3.44820478072216 0.00575551641784628 1 3.96607495601402 18.0684908467576 0.333894958848536 0.0902818777234659 AT5G26840_at 3.09428466907154 2.72972310534288 3.31798028958792 3.35377326490338 3.21707277201250 3.01529065849268 3.39197143655057 2.52071105387389 4.06271881314045 3.79023673874502 3.63392664132609 3.44355518987643 3.65660035614551 3.43945574518702 3.89536846818327 3.28838626116759 4.12407216707323 3.89427450102779 3.36597027176418 0.178153890527166 0.175291685154569 0.179516781528762 0.172007065769741 0.171418957975773 0.171418957975773 0.182744603215847 0.17880140922609 0.173252664630965 0.175302414339715 0.174242710557418 0.173044222120127 0.174288785596634 0.176352329307127 0.174492077653875 0.172957790767096 0.177834851026609 0.175377919556419 0.173814215414824 5 5|0 -|/ 9442308 9442547 9442404.2 9442291 9442608 - gene protein_coding_gene TRUE TRUE AT5G26840.1 unknown protein -0.447691343165755 -3.44691268887722 0.00576838203921303 1 3.96409637527844 6.78589933496188 -0.447691343165755 0.167246114224990 AT5G52720_at 3.25935827292691 3.02741052643987 6.32147580590431 5.4129647944137 3.39363323226961 3.44439271314220 2.39324494238014 2.45759953937026 2.91132647859517 2.54225551077339 2.44509363114978 2.36230330197632 2.40952090826303 2.55679809955770 3.10132314739675 2.31140760187274 2.83592471828679 2.77701725674481 2.38042876487590 0.312674802875526 0.312674802875526 0.423011425500633 0.407146534025557 0.315301067038740 0.318463496250158 0.327690687474794 0.312763264926043 0.312674802875526 0.313621529990176 0.313868577391996 0.321989450341607 0.319274994750160 0.321991545271237 0.312674802875526 0.317135229649117 0.3212811389739 0.312674802875526 0.312674802875526 5 5 + 21396310 21396728 21396579.375 21396083 21396970 + gene protein_coding_gene TRUE TRUE AT5G52720.1 metal ion binding similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52670.1); similar to Unknown (protein for MGC:78286) [Mus musculus] (GB:AAH71252.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121); contains InterPro domain Peptidoglycan binding-like; (InterPro:IPR009070) 0.44005341715316 3.44413759156729 0.00579611431344917 1 3.95984635611001 6.31939022897461 0.44005341715316 0.162883886483336 AT5G18510_at 2.21979753515706 2.70787072876937 2.52898450365266 2.88617823805351 2.13619528853895 2.42232142911656 2.54520013493081 2.80424195591502 2.44075636754673 2.79326654446895 2.51042375391853 2.23731275997038 2.56264535169818 2.58378738978678 2.56428292790217 2.30294584874417 2.7388334593353 2.58164839639525 2.59964298130063 0.222850998900263 0.218154603234424 0.221956165732456 0.220709794125612 0.222509882445539 0.219347607380259 0.226405921004746 0.229103017545474 0.220813960891219 0.231580290534515 0.232409038897653 0.217930522974443 0.219998953180228 0.215740510917004 0.222038022107438 0.214240860856933 0.222207909199697 0.221643081676404 0.230955767164882 5 5 - 6141780 6142346 6142100.909 6141780 6143888 - gene protein_coding_gene TRUE TRUE AT5G18510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51538.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50830.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO60015.1); contains InterPro domain Protein of unknown function DUF1723; (InterPro:IPR013541) -0.379072324080226 -3.44283652524088 0.00580916337915012 1 3.95785355313279 5.09207720197055 -0.379072324080226 0.124162788546744 AT5G25900_at 7.87420182755906 8.42558126367357 7.56426665676643 7.7024519806612 9.3123257188222 9.03178368612799 7.12090768030965 7.65309182760376 7.2770875162145 8.56646064792358 8.58805153066876 8.99967937431483 8.94261897568228 7.99882417650202 7.93614477280138 7.49520911740609 8.18782063949534 8.4491643863934 8.0933313424526 0.178494466968160 0.176372774269564 0.187376006911305 0.192829743847130 0.179991336486387 0.17528308533423 0.184148009699750 0.183616483820038 0.208912815421891 0.177368071701122 0.183361642179001 0.175728884009528 0.177955825302532 0.192686271579469 0.185323947081093 0.184303661827156 0.200858662589423 0.181627999115193 0.176738696850004 5 5 + 9037620 9038236 9037920.636 9036021 9038409 + gene protein_coding_gene TRUE TRUE AT5G25900.1 GA3 (GA REQUIRING 3); oxygen binding Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway. Identical to Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3) (KO1) [Arabidopsis Thaliana] (GB:Q93ZB2;GB:O81188;GB:Q9S7C8); similar to CYP71B26 (cytochrome P450, family 71, subfamily B, polypeptide 26), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26290.1); similar to cytochrome P450 monooxygenase CYP701A16 [Glycine max] (GB:ABC68411.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.408054577575072 -3.44246371668675 0.00581290803362612 1 3.9572825056715 16.2374008087846 -0.408054577575072 0.143232220101386 AT5G58460_at 2.91013867567057 2.52228560022628 2.75047888391005 3.15778780892899 2.61250419873107 2.68665561687662 2.52719236155902 2.92181919466428 3.0830780052249 2.69022532448559 2.87712922485619 2.54686558640756 2.30911846127796 2.80787164285850 2.89192108305788 2.81658846138683 3.19731450623365 3.11314665699666 2.94108381619989 0.188179025319868 0.190725666575220 0.191026076636039 0.193604393144698 0.196568136581417 0.193361034707535 0.193876471397627 0.194142124104345 0.190258442173148 0.195309407565332 0.206036665838078 0.194162198612626 0.196394820123752 0.195682545694372 0.194008096098100 0.189407517866039 0.190314259066488 0.190389224786527 0.190923686466798 5 5 - 23649599 23650150 23649932.727 23649587 23652263 - gene protein_coding_gene TRUE TRUE AT5G58460.1 ATCHX25 (cation/hydrogen exchanger 25); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX24 (cation/hydrogen exchanger 24), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G37060.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84887.1); similar to Os05g0485000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055872.1); similar to Os01g0817400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044623.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) -0.372354271082146 -3.44216471716216 0.00581591311092358 1 3.95682450573433 5.62350287666479 -0.372354271082146 0.119590581904739 AT5G44780_at 2.98706485152747 2.53752299750356 2.92435757125040 2.96670421930152 2.49833004867402 2.96731804880676 2.71598998484337 3.32763548608218 2.56473082078201 2.68229086648713 2.51089497768739 2.80571950293729 2.59685253557649 2.71802987672116 3.03767387490326 2.53159031434020 3.20718300542019 2.72948324599125 3.19370899555708 0.179633790018855 0.180963768183181 0.186412532916240 0.179683614314781 0.179710130639995 0.176403241658438 0.183135835905911 0.184080455023771 0.183297025671354 0.186176537937736 0.178173699507053 0.178886685364292 0.177312673336138 0.184648853598960 0.179299123394093 0.181432162428265 0.189309026136425 0.177824320182216 0.183591607519873 5 5 + 18087209 18087724 18087397.455 18085287 18087881 + gene protein_coding_gene TRUE TRUE AT5G44780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20020.2); similar to Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE87738.1); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.425742689398651 -3.43867637871333 0.00585109070493163 1 3.95148056260627 5.65599305648494 -0.425742689398651 0.154585487630496 AT5G59450_at 5.99358457824893 6.2618638995218 6.76171724497376 7.12605626995914 7.56740487598122 6.87204184046397 6.1447548141779 6.0697899275416 5.58929209716604 4.66682584657539 6.97696853440386 7.37858005179409 6.74502817076438 7.20025579774857 6.61577504492175 7.09527499023699 7.11360094385014 6.72660556316139 4.86225956244472 0.203867121675458 0.190735186525842 0.199379209827592 0.201197301693970 0.207052584169706 0.197739924318651 0.200003589217134 0.190735186525842 0.217125041756759 0.197599679603052 0.19704244287463 0.200259667974046 0.196894136850568 0.200685033624509 0.200947774481988 0.192575163359385 0.208942919779106 0.196663178217036 0.202550389561304 5 5 + 23993306 23993798 23993502.545 23991894 23994017 + gene protein_coding_gene TRUE TRUE AT5G59450.1 scarecrow-like transcription factor 11 (SCL11) similar to scarecrow transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G46600.1); similar to GRAS4 [Solanum lycopersicum] (GB:ABD72960.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.408646655502435 3.43526238417937 0.00588573041794782 1 3.94624945420218 12.6101368342780 0.408646655502435 0.144152167092391 AT5G37020_at 4.82165382311425 4.13709937653557 4.89311649876707 4.63084575225695 6.05450921524318 5.45013710147983 6.46440035573963 5.22541668106655 5.67463341528771 5.79945283116162 6.41714001021014 6.73052638768874 6.18630494677329 6.88320505432689 6.07987207312296 7.15666813709113 6.34874342375447 6.40086772798136 6.16059049058781 0.192821597528329 0.190590515185442 0.198452401060046 0.193112051858177 0.190360979426212 0.194332498062304 0.194412853668207 0.193947014300661 0.196093767808428 0.196028299778224 0.190360979426212 0.192544208241537 0.193201883010623 0.193569338908415 0.200267882796224 0.192801169456422 0.214882644965466 0.195954831728105 0.196504111576133 5 5 + 14650586 14651295 14650851.455 14647258 14651617 + gene protein_coding_gene TRUE TRUE AT5G37020.1|AT5G37020.2 ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor|ARF8 (AUXIN RESPONSE FACTOR 8) Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. Identical to Auxin response factor 8 (ARF8) [Arabidopsis Thaliana] (GB:Q9FGV1;GB:Q9ZTR9); similar to ARF6 (AUXIN RESPONSE FACTOR 6), transcription factor [Arabidopsis thaliana] (TAIR:AT1G30330.1); similar to auxin response factor 3 [Cucumis sativus] (GB:BAD19063.1); similar to auxin response factor 8 [Oryza sativa] (GB:BAB85918.1); similar to H0624F09.13 [Oryza sativa (indica cultivar-group)] (GB:CAH67705.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525) -0.632373366040774 -3.43488130513876 0.00588961005095825 1 3.94566547955578 11.4114681250909 -0.632373366040774 0.270195192403789 AT5G62630_at 10.5189856769758 10.6037903805728 10.8723851745822 10.9131354555416 11.2884119226704 11.1858912381162 9.49865745052204 9.40485534529931 9.4879808105352 9.26248258615396 10.1061004505973 10.4705854197384 10.4097290683714 10.4479211511230 9.6170223890189 10.097411757151 10.4020225882402 10.1706934915009 9.49588319374577 0.0771684177367966 0.0771684177367966 0.080089608079861 0.0837908180278292 0.077395890950088 0.0776269829736051 0.0797563233303256 0.0832395968758465 0.100356297011903 0.0816762779060684 0.079299480759734 0.0775446041184885 0.0819891354538254 0.0845581139304936 0.0840886256909265 0.0771684177367966 0.0826315413903201 0.0799231969320193 0.083108185830682 5 5 - 25160988 25161585 25161262.273 25160821 25163685 - gene protein_coding_gene TRUE TRUE AT5G62630.1 HIPL2 (HIPL2 PROTEIN PRECURSOR) Identical to HIPL2 protein precursor (HIPL2) [Arabidopsis Thaliana] (GB:Q94F08;GB:Q9LV15); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39970.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74790.1); similar to hypothetical protien [Hordeum vulgare subsp. vulgare] (GB:AAV49993.1); similar to glucose/sorbosone dehydrogenases-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30151.1); similar to unnamed protein product [Triticum tur (GB:CAJ13560.1); contains InterPro domain Soluble quinoprotein glucose dehydrogenase; (InterPro:IPR011041) 0.279158077862404 3.43260236333054 0.00591286609402873 1 3.9421729046807 20.3510814070080 0.279158077862404 0.0290411037657167 AT5G44050_at 1.67193924787418 2.15478575435669 4.24864760600738 4.33796585206442 3.49005325581431 2.823072640383 5.99262634882999 6.01348790439894 3.39959267534444 4.99124914844964 7.14746282748414 6.79651293831573 6.5866061468315 6.94494398880429 6.68483810418264 6.51264838489921 6.688415079027 6.93155978879412 3.62009639730244 0.286216129598911 0.285157658854288 0.274510029638507 0.273869578952583 0.269968171365137 0.276559311477479 0.269025348019221 0.271667116487955 0.280444497116264 0.272291174032912 0.269025348019221 0.269025348019221 0.276274883477144 0.276068260877009 0.270978064137692 0.269548384610020 0.281955236152658 0.285209137583632 0.269025348019221 5 0|5 /|+ 17742727 17743183 17742906.333 17739711 17743606 + gene protein_coding_gene TRUE TRUE AT5G44050.1 MATE efflux family protein similar to antiporter [Arabidopsis thaliana] (TAIR:AT5G10420.1); similar to ripening-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G65380.1); similar to 4D11_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67541.1); similar to 117M18_23 [Brassica rapa] (GB:AAZ66942.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 0.40705906751359 3.43215960398743 0.0059173952844106 1 3.94149430366273 9.2367070667117 0.40705906751359 0.143376268732344 AT5G07810_at 1.79929611020277 1.75804355508608 1.61265496273047 1.81969482251400 1.18036683524477 1.53634746876890 1.71170200398470 1.65791324576636 2.35817551979996 1.66396800319019 2.08030734523986 1.94769343429275 1.81994476251748 1.6917958968158 1.99482170477404 1.52485326014329 1.70103142842413 1.70856642871699 1.88188733719393 0.194674305484482 0.188078945542114 0.188553446117185 0.194319782368793 0.187704342180102 0.189222898352472 0.190943781987548 0.187635691336202 0.201109407578590 0.191549656987989 0.191972850407911 0.185980659029306 0.196792101967403 0.190779839904433 0.185980659029306 0.191626394566954 0.199264657380934 0.189632684048271 0.186378727703485 5 5|0 -|/ 2491435 2492400 2491818.375 2491284 2498485 - gene protein_coding_gene TRUE TRUE AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein similar to SNF2 domain-containing protein / helicase domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48310.1); similar to Vacuolar H+-ATPase V1 sector, subunit A (ISS) [Ostreococcus tauri] (GB:CAL56267.1); similar to Os07g0598300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060181.1); contains InterPro domain HNH endonuclease; (InterPro:IPR002711); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -0.311643484749407 -3.42754832213575 0.00596477872382753 1 3.93442572883069 3.52282091020904 -0.311643484749407 0.0722247156264983 AT5G41620_at 3.34807919944483 3.78128101140531 4.20241101190065 4.2187278262568 4.33019360518935 4.30684558376592 4.68001856815001 4.24471744191544 3.68049939788081 4.27817877207769 5.02012914282337 5.05557112770833 4.16700799237234 4.50967021941998 4.60593677868239 5.02344010122991 5.07163995993875 4.73377842754181 4.39149503703024 0.2032911135664 0.200251357689703 0.202235466510131 0.201430737707141 0.201034258455016 0.205805655455353 0.203592376076975 0.201767550268576 0.209680681121996 0.198918049718744 0.203025276389048 0.198669489754731 0.205145557693994 0.206141076296863 0.198669489754731 0.199321275529411 0.204565930264914 0.206544561369912 0.203464125013771 5 5 + 16665410 16665977 16665723.636 16663666 16666196 + gene protein_coding_gene TRUE TRUE AT5G41620.1 similar to intracellular protein transport protein USO1-related [Arabidopsis thaliana] (TAIR:AT1G64180.1); similar to unnamed protein product; gb|AAF24581.1 gene_id:MBK23.17 strong similarity to unknown protein [Medicago truncatula] (GB:ABE79740.1) -0.352362772067377 -3.42663570058905 0.00597420253907434 1 3.93302656037162 8.58409484152563 -0.352362772067377 0.106391644097943 AT5G49020_at 6.72616803893675 6.27807947377593 6.65066758759302 6.19598784038987 6.84325539005768 6.9070113123542 6.4961356506867 6.22661385359923 5.38301113476051 5.04160679917612 6.18843815891599 6.72581389632408 6.26642158322689 5.87809491864078 7.08700815820618 6.01678271935392 6.68045953283174 6.7062325915766 5.53906885722002 0.251962393929359 0.23697167344626 0.234561068486349 0.232531456976278 0.242242100000862 0.234042041134869 0.238126837590588 0.238365382032802 0.237632884505165 0.251078448080186 0.237463745024755 0.242827320053919 0.235325387211034 0.244097553535215 0.244146650257344 0.232531456976278 0.250061770563509 0.240232737320739 0.239847400137519 5 5|0 +|/ 19891100 19891885 19891356.571 19888477 19892146 + gene protein_coding_gene TRUE TRUE AT5G49020.1|AT5G49020.2 protein arginine N-methyltransferase family protein similar to protein arginine N-methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G06930.1); similar to Os07g0671700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060600.1); similar to ar (GB:CAL25348.1); contains InterPro domain Methyltransferase small; (InterPro:IPR007848); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) -0.371819999908048 -3.4261974347562 0.00597873354989302 1 3.93235461533903 12.4229325810592 -0.371819999908048 0.120422155569761 AT5G20650_at 10.5947253005749 10.9948783190806 11.2648193108451 11.4395548353202 11.7322600584080 11.5959644269726 10.5344877731211 10.7403278149442 10.4110942109368 10.4062587555659 11.6858691454984 11.6062507805115 11.4467608041668 11.4492556380500 11.2881013214015 11.5450296795394 11.0480291292949 11.4785061693795 10.4558352834877 0.0908516014622076 0.0902642221133073 0.0955848349235781 0.0947483652976508 0.090170372188112 0.092224151382462 0.0902290825227206 0.0890910655663288 0.0956761903656899 0.0929646581269253 0.0889049209234568 0.0883621642864532 0.0918935344032689 0.0911094430418664 0.0913961122637616 0.0883621642864532 0.109083679422655 0.0960779254103812 0.092627753040414 5 5 - 6985494 6985832 6985663.273 6985300 6986039 - gene protein_coding_gene TRUE TRUE AT5G20650.1 COPT5 (copper transporter 5); copper ion transporter encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast similar to copper transporter, putative [Arabidopsis thaliana] (TAIR:AT2G26975.1); similar to Ctr copper transporter [Medicago truncatula] (GB:ABE81754.1); similar to Os09g0440700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063282.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) 0.327609495747075 3.42609793188508 0.00597976275203248 1 3.93220205612371 22.0460629383135 0.327609495747075 0.0868040475027405 AT5G58350_at 8.86091339638807 9.15576458695456 10.0231527978079 10.1499909044309 9.9534315927818 9.5058947051082 8.42589743868184 8.64699259612438 7.3148703530728 8.03397646554627 6.24961974971055 6.08020561705095 8.42743457127457 8.05980723164022 5.85329698259452 8.91833780121483 9.15669943924127 7.38490180247846 7.60915205751495 0.217898778928372 0.217898778928372 0.226745932133894 0.221041724789934 0.217898778928372 0.219219986995889 0.222829791516680 0.217898778928372 0.23800788908134 0.22106418175709 0.230814106044597 0.229225190350619 0.217898778928372 0.225085579133166 0.226124900024810 0.217898778928372 0.219979187023783 0.230178890093545 0.223133348090115 5 5 + 23604253 23604869 23604548.545 23602015 23605027 + gene protein_coding_gene TRUE TRUE AT5G58350.1 WNK4 (Arabidopsis WNK kinase 4); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. similar to WNK5 (Arabidopsis WNK kinase 5) [Arabidopsis thaliana] (TAIR:AT3G51630.1); similar to mitogen-activated protein kinase [Nicotiana tabacum] (GB:AAQ83971.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.346735469242988 -3.41940527205979 0.00604940751088281 1 3.92193878281737 16.9247318480074 -0.346735469242988 0.102701413390298 AT5G13530_at 1.95631058554608 1.66735923078856 2.33152785581086 1.89320082013164 2.13898169951057 2.22248521378874 1.77923796655226 1.44602592925449 1.57435614275222 1.18211768421932 1.72657979561623 1.92135845423957 2.18133346447696 2.01572133538989 1.59852198610366 1.47106206403719 2.17560621350416 1.95654840509771 1.24857421061820 0.197510987078329 0.204981736245703 0.201172559714339 0.200818505138646 0.210473546232721 0.194542898203045 0.200517880495379 0.194542898203045 0.212335204368406 0.202224183781925 0.210186308850778 0.200366046997382 0.200768676108995 0.205842811657014 0.196016387918868 0.194653959197160 0.205452694465908 0.205250412681175 0.201671087705547 5 0|5 /|+ 4349339 4351125 4350060.4 4345621 4351150 + gene protein_coding_gene TRUE TRUE AT5G13530.1 KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase Stone et al. (Plant Cell, 2007, PubMed ID 17194765) suggested that this locus is misannotated, with a full open reading frame ORF likely encompassing both the At5g13530 and At5g13540 loci. The misannotation will be corrected with the next Arabidopsis genome release (TAIR8). At5g13530 and At5g13540 together encode KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. similar to kinase [Arabidopsis thaliana] (TAIR:AT4G32250.3); similar to Protein kinase; Zinc finger, RING-type [Medicago truncatula] (GB:ABE84394.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.354360388597091 3.41752258269602 0.0060691488488081 1 3.91905095192907 3.53731990134194 0.354360388597091 0.108573918808960 AT5G64680_at 5.40564920442297 4.98788427710344 5.55470817966354 5.44000782998057 6.11103572519436 4.98121454679091 5.44087091013750 4.87160761627868 3.37778595586947 4.20898791275221 3.89915659199284 4.636109833686 4.55554487960397 4.2710298086968 4.50138952930242 4.64723900476499 4.30005683569411 4.22700592702528 4.55648833134781 0.208602143209972 0.208602143209972 0.219591737025911 0.218069614287328 0.21865172921079 0.215634963155308 0.210419117415994 0.225269512241056 0.217001138092602 0.211318189148902 0.212088617724338 0.209874878729122 0.212340514167906 0.212881856117411 0.224508535722751 0.209683073348519 0.21404385635955 0.222289761113341 0.215917155979218 5 5|0 +|/ 25871695 25872489 25872153.2 25871366 25872710 + gene protein_coding_gene TRUE TRUE AT5G64680.1|AT5G64680.2 similar to Os01g0259900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042641.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81433.1) -0.556693715798673 -3.41712266580556 0.00607335077795151 1 3.91843748536021 9.56284509519764 -0.556693715798673 0.231417526157999 AT5G07960_at 7.84809022710201 7.67184296168939 8.402901415352 8.55810897315869 8.76659634486201 8.62234110098504 6.78231787786693 6.78630995622145 7.27477220700752 6.88421620419557 8.43894537951198 8.2887732893549 8.08096711840805 8.2417093475026 8.2584524026202 7.83570113692854 7.74295099894739 7.78177590182427 6.57177407346537 0.162330431541284 0.157656406234325 0.158323699887229 0.158993752092901 0.166098159485433 0.158736440012256 0.163571563024056 0.169861918300962 0.165787402865333 0.168774233483821 0.165822042350053 0.159382299586528 0.158108049638285 0.163946545329725 0.160462680058976 0.160951285287482 0.163103922743455 0.157847275394286 0.165767017147093 5 5|0 +|/ 2542356 2543229 2542798.625 2542247 2543460 + gene protein_coding_gene TRUE TRUE AT5G07960.1 Identical to UPF0139 protein At5g07960 [Arabidopsis Thaliana] (GB:Q9SD88); similar to unknown protein [Sorghum bicolor] (GB:AAM47587.1); similar to Os03g0756800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051319.1); contains InterPro domain Protein of unknown function UPF0139; (InterPro:IPR005351) 0.288725444467553 3.41330019373867 0.00611366463323387 1 3.91257317131069 15.4267704113764 0.288725444467553 0.0477009718131094 AT5G22530_at 2.46686094034746 2.54891236276138 4.43365666690805 4.47141161263745 2.67568929855132 2.86937827483254 2.14793936793305 1.90430064208773 2.41906658786186 2.69259948429767 2.74908843533143 2.17901600052799 2.37716264601987 2.53044386564174 2.34830541871577 2.84885666851021 2.44689820977257 2.60526015868107 2.60131186736209 0.212863683895767 0.205785929811327 0.231451027780600 0.235541030985337 0.212249472676450 0.214609802353577 0.207725256125674 0.214853993897469 0.211345835192063 0.215472271928827 0.206219174169733 0.214063709373883 0.210091451617099 0.207297537093053 0.211001750004319 0.206585978617052 0.20382277516771 0.209882302419010 0.213744281839954 5 5 + 7480629 7481021 7480845.818 7480530 7481197 + gene protein_coding_gene TRUE TRUE AT5G22530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22520.1) 0.295224030651716 3.41256393365776 0.0061214611491166 1 3.91144347978961 5.48057943171102 0.295224030651716 0.0560849634781144 AT5G06680_at 3.18924819036615 3.30090961158568 3.73776698501842 3.57598944909713 4.58891882366575 4.60774169571324 3.35801430563368 3.2324354736997 3.14249264505551 2.75892397989521 4.13729219624024 3.97794157191525 4.13969600236753 4.02834328439255 3.39226360558055 4.03230025820973 4.33006076003644 3.85967502026583 3.15035118573531 0.238054594185782 0.230603905941097 0.234646888555245 0.23556191912063 0.232579531141663 0.238456291282993 0.230603905941097 0.236055523734456 0.240163849304203 0.241112099129765 0.232815246420830 0.235006352704049 0.238380666274301 0.237681686930897 0.244393213147775 0.238568604719835 0.243825976679914 0.246401132853472 0.245638320078521 5 5 + 2058669 2059339 2058987.545 2056588 2059748 + gene protein_coding_gene TRUE TRUE AT5G06680.1 SPC98 (SPINDLE POLE BODY COMPONENT 98) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. similar to tubulin family protein [Arabidopsis thaliana] (TAIR:AT5G17410.1); similar to Os09g0446200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063308.1); similar to Gamma-tubulin complex, DGRIP91/SPC98 component (ISS) [Ostreococcus tauri] (GB:CAL51771.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) 0.283619730355132 3.41066989528692 0.00614156474930205 1 3.90853711969231 7.20110432898315 0.283619730355132 0.0404979667083729 AT5G45370_at 2.68772141952904 2.74861964592495 3.85878730691063 3.68971162991217 3.64205929566898 3.18059774410939 2.90683759265018 2.3693634808004 2.45114675113758 2.20030666094826 2.72187172688647 3.25529776748491 2.82696467174723 3.09431200836869 2.74496140484261 3.11204198692415 3.12419542449730 3.27016449342086 2.44665464712993 0.195939150769056 0.193975276786976 0.202099409262696 0.204428787100040 0.195322735154342 0.194241805676599 0.198091216403610 0.192244283385783 0.20049876896804 0.193243156200237 0.216162375041593 0.190922848833401 0.190922848833401 0.198709994740391 0.203559784553682 0.192995857451924 0.193783822984190 0.202732360405816 0.200511326471471 5 5|0 +|/ 18406654 18407197 18406909.1 18405518 18407647 + gene protein_coding_gene TRUE TRUE AT5G45370.1|AT5G45370.2|AT5G45370.3 nodulin-related / integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G19185.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE84659.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 0.378734145909586 3.40910569139738 0.00615821856064229 1 3.90613665108134 5.82784336706827 0.378734145909586 0.126474472212016 AT5G28190_at 2.27628362615962 2.50531653937854 2.37537280379600 2.66223034725446 2.41099859181423 2.38638285118360 2.22716104764547 1.88553952698509 2.72153722605737 3.00949353134253 2.42166016921028 2.38386543761035 2.84776610742366 2.02530364979204 2.67620787755153 2.39627983821182 2.90332884087421 2.58961272718902 2.82228566747309 0.187051382576312 0.188238171153865 0.187286237505433 0.191897861430072 0.186853326342404 0.18567626114879 0.189037375088223 0.187268444209697 0.187590415511069 0.184123482109417 0.186930748281703 0.187693411033127 0.186333577478295 0.186352941444517 0.186123429024368 0.186885814289298 0.185615996724308 0.19102828161073 0.187420251778752 5 5 - 10167897 10168574 10168320.818 10167854 10170700 - gene protein_coding_gene TRUE TRUE AT5G28190.1 unknown protein -0.325627715864534 -3.40441817097443 0.00620840409390014 1 3.89894180566331 5.03196494474739 -0.325627715864534 0.086882149314328 AT5G13900_at 1.33978911978517 1.68026613283219 1.11138185672292 1.50373737594221 0.948593609971883 0.913140212827752 1.20009724203290 1.27195719975681 0.98848228048714 1.94873219784339 1.36119987207405 1.05428902984575 1.43444392461788 1.55286533348109 1.15345603366218 1.06592154938253 1.26610430968020 1.41969218046678 1.61836032584822 0.198313113438149 0.198132496538733 0.203032275142638 0.207718024518857 0.211087757140449 0.204229482027106 0.197049168220553 0.197049168220553 0.204546280911456 0.209344076585863 0.202498476187490 0.208186424617328 0.209701677981496 0.204192630170526 0.197382988022921 0.199970435592389 0.202494037207716 0.198773348871411 0.209891100205138 5 5|0 -|/ 4481362 4481823 4481657.4 4481234 4481891 - gene protein_coding_gene TRUE TRUE AT5G13900.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G22600.1); similar to lipid transfer protein [Picea abies] (GB:BAA23548.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.330178763811287 -3.40137315153271 0.00624122953712959 1 3.89426702307198 2.64963107567276 -0.330178763811287 0.0909629451491077 AT5G12230_at 6.00043015253116 6.0102740411153 7.4360830881818 6.84237966785288 7.78018227377147 7.8752458585222 5.93416701428025 5.28764604200795 5.13954948550195 4.7967041946431 6.67352976359122 6.19671636197373 5.98748687514446 6.14903658657404 5.79788990066563 6.22368089280041 6.48013057590231 5.8435365932663 4.87352946214471 0.222757665136500 0.22093177293712 0.226295899199913 0.225954118111494 0.215057656416879 0.216490826868350 0.218054108257273 0.221795941537717 0.240509240512112 0.233794168100712 0.215057656416879 0.220624447351664 0.223183241488635 0.219157676647501 0.219163375248666 0.215057656416879 0.228449539666988 0.215057656416879 0.228138447031216 5 5|0 -|/ 3954397 3955067 3954857.3 3953149 3956186 - gene protein_coding_gene TRUE TRUE AT5G12230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19480.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22085.1); similar to Os12g0614000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067267.1) 0.417731233806014 3.39704683103822 0.00628817421030808 1 3.88762381052407 12.1985986795344 0.417731233806014 0.152799242958885 AT5G43730_at 1.74222699523074 1.67019426602947 2.517524337918 2.56274643405737 2.28155468247040 1.48936095078839 1.60739005353098 1.30483018342827 1.82602372500720 1.86559652862466 2.42348844202652 2.62324821859316 2.66444581407203 2.75988576772066 2.44487590083801 2.78158344143038 2.51880784365033 2.06347220813717 2.25947744603474 0.190127191435986 0.18963963850809 0.189283779861096 0.196771604419381 0.189671181090206 0.185305483604499 0.195341277799255 0.188432021678647 0.207055667346289 0.194484602074389 0.190703151482501 0.190117009303192 0.189818485525406 0.185305483604499 0.185672205202058 0.187260773458809 0.197924423561922 0.191089355927882 0.1883352191819 5 5 + 17579506 17580008 17579768.727 17577494 17580040 + gene protein_coding_gene TRUE TRUE AT5G43730.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g43730 [Arabidopsis Thaliana] (GB:Q9FG91); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43740.2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G15890.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.409097686894965 3.39522089269994 0.00630809601811888 1 3.88481954764952 4.15631608182207 0.409097686894965 0.147487570618919 AT5G67370_at 9.59310894131067 9.91629223692373 10.4570793201800 10.6831031965455 10.9094492375064 10.610577607601 11.0699716020987 11.1721324129965 10.4820907180966 10.9440647913055 10.8734694396545 10.9563482598089 11.4113934201558 11.1550405358860 10.5030015977148 11.7727409298492 11.3146108534801 10.6548516878702 10.8356669264734 0.125191755161503 0.116227419050721 0.120782716184371 0.114619722729357 0.118500085968887 0.114073875156210 0.116798094852197 0.115520948809541 0.128422429343415 0.115054484161293 0.119957892425393 0.115342628516445 0.113769811652290 0.120229197756840 0.123745992847423 0.117107061715371 0.121706263210902 0.116449162583338 0.114995991701975 5 5 - 26894929 26896211 26895466 26894779 26896768 - gene protein_coding_gene TRUE TRUE AT5G67370.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11840.1); similar to Protein of unknown function DUF1230 [Medicago truncatula] (GB:ABE85761.1); contains InterPro domain Protein of unknown function DUF1230; (InterPro:IPR009631) -0.325204819057461 -3.39319937854157 0.0063302272371001 1 3.8817145952946 21.4685257706508 -0.325204819057461 0.0874389095297708 AT5G42140_at 4.28589892311611 4.39655219096156 5.07126163212393 5.55517349188524 4.98106611080763 5.45278106630221 3.24188575190597 3.58093841395962 3.63029079896225 3.30611447753146 4.52803555523813 4.57878930134994 4.22680255458925 4.20328384515790 3.85361466475142 4.53283579805209 3.84414983135132 3.93615594478348 2.89118668078106 0.217141543287728 0.219477314813291 0.220271747041431 0.221184037347533 0.223507510947937 0.227692814469153 0.221948536756982 0.216780018455604 0.227855051277512 0.228795541583609 0.219357377934029 0.216780018455604 0.219986242495066 0.22190824202264 0.224884089854050 0.216780018455604 0.224430652003613 0.221919085191881 0.221445574357838 5 5|0 -|/ 16854783 16855411 16855168.2 16854608 16858868 - gene protein_coding_gene TRUE TRUE AT5G42140.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G19420.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to putative chromosome condensation factor [Triticum aestivum] (GB:AAW78916.1); similar to putative chromosome condensation factor [Triticum monococcum] (GB:AAK84081.1); similar to H0723C07.10 [Oryza sativa (indica cultivar-group)] (GB:CAJ86040.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 0.385057722161948 3.38952174527172 0.00637069400869015 1 3.87606504685247 8.3151059089665 0.385057722161948 0.13223534119229 AT5G01980_at 7.65358712109496 7.72423683924622 8.2543758797459 8.33993010897037 8.01958752367122 8.23728369241621 6.80668133249132 6.91318824606057 7.51220111841761 7.03885386472614 7.50937423850472 7.75953905031344 7.60799406292607 7.62231564325442 7.43473044213196 7.88956504835208 7.95256621855157 7.84752560694119 7.28178143504429 0.133450430968594 0.128811971512881 0.13550446678712 0.135889622810991 0.130116135802949 0.136780975796446 0.131699537960216 0.137479328130435 0.153254969582601 0.144996474017516 0.132081060118011 0.131378332822275 0.130277605899431 0.136032996981543 0.137988554284105 0.128811971512881 0.131627263843987 0.130153774457626 0.137684425294447 5 5 + 376496 376956 376692.909 375212 377205 + gene protein_coding_gene TRUE TRUE AT5G01980.1 zinc finger (C3HC4-type RING finger) family protein similar to CIP8 (COP1-INTERACTING PROTEIN 8), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G64920.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91189.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.285386803619301 -3.3870721788308 0.00639779501249431 1 3.87230142128791 15.2338905570961 -0.285386803619301 0.0461268606608512 AT5G25470_at 3.49238154588354 3.40218294137056 4.23402344183148 4.24849319301642 4.79252088043015 4.54856562535971 2.94308662735073 3.60995226452539 3.05110221717329 3.21075907052361 3.86732080422535 4.12221520757806 4.48029572118082 3.70558477551114 3.86170709820144 4.29930449560713 4.67743722627216 4.24130948155752 3.14418155510498 0.220663581545374 0.220753148428652 0.242190506632481 0.232915199450028 0.249801125702377 0.250223566726880 0.225968362849929 0.225060840655056 0.235214417042023 0.223550008462067 0.220592461246818 0.223359031646249 0.235306237270997 0.226299375801304 0.225231909297731 0.220116681833701 0.229819129789901 0.223338364448041 0.222747820405187 5 5|0 -|/ 8865872 8866639 8866166.4 8865657 8867688 - gene protein_coding_gene TRUE TRUE AT5G25470.1|AT5G25470.2 DNA binding similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25475.3); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 0.372526091893260 3.38687010378899 0.00640003596489727 1 3.87199092182607 7.555023047738 0.372526091893260 0.123896637915077 AT5G04190_at 3.5172453916067 3.49195128473453 1.90755168673902 2.19178429685768 3.88293517332194 3.45212343609765 2.00220639389198 2.70399240800728 4.24231761400534 3.87602245993462 4.41028985724523 5.84083810525077 5.06059114996687 4.47586091037887 6.13164028695102 6.4715190322587 5.08562501164693 4.12925718021419 5.47331260353783 0.23259239869706 0.235199109299811 0.233543769041347 0.231877614962181 0.232681534519841 0.232563268202589 0.232158438206318 0.232564244237377 0.244563633645150 0.234260175965806 0.234811124066927 0.232562004772979 0.238795582253458 0.234438077565447 0.237027413413057 0.238525191149877 0.245920029553055 0.238896498585501 0.234277031501371 5 5 + 1151753 1152249 1151984.273 1150893 1152482 + gene protein_coding_gene TRUE TRUE AT5G04190.1 PKS4 (PHYTOCHROME KINASE SUBSTRATE 4) Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism. similar to phytochrome kinase substrate 1-like protein, putative [Medicago truncatula] (GB:ABD28653.1) -0.412976440558847 -3.38390951229423 0.00643296056316289 1 3.86744142358149 7.75935055102293 -0.412976440558847 0.150818934685446 AT5G01360_at 2.23168975859996 2.07415384725759 3.65181587205040 3.57640741077079 2.27740549786863 2.94181592332959 2.15058415918204 2.43167844376474 2.74624275768233 2.83423450879914 2.78784820942177 2.89321589050576 3.23709393162490 3.37826487762975 3.19829916115619 3.14914975617706 5.66108835750956 3.18588101275079 2.75076177128770 0.223646826963686 0.226377032502043 0.217867582327778 0.221567232560396 0.223170652214855 0.237727114959185 0.217141489403162 0.224001112899379 0.227276361847467 0.223887830850887 0.226981317554483 0.223746480248882 0.216257306768568 0.217433651375915 0.216257306768568 0.216257306768568 0.236669769513055 0.220400164281472 0.227432519827333 5 5 - 147610 148176 147877.182 147481 149366 - gene protein_coding_gene TRUE TRUE AT5G01360.1|AT5G01360.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE79610.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.378727059906666 3.38301416747689 0.0064429518447614 1 3.86606541815478 5.77366127852965 0.378727059906666 0.128452639125353 AT5G61150_at 6.8819313318161 6.82532543283854 7.35940056889247 7.6035558163464 8.0347100031094 7.13311538255695 6.85728987428157 6.93441976951114 6.8647330557581 6.71287526790507 7.563044774193 7.38166973488198 7.51623340209837 7.53131749092876 7.31822640462163 7.49320667440241 7.06968004979342 7.00193286541097 6.93230259213338 0.178185978125883 0.168594595994666 0.184951504558288 0.176704153498725 0.189410203320174 0.17739068810721 0.182278968227796 0.170334084830338 0.189658538771957 0.177000341223924 0.171580598123693 0.169298893650438 0.167671633391918 0.174934748376324 0.181154396384756 0.169878042177328 0.169570994125086 0.187723439126134 0.172114262478123 5 5 - 24621092 24621874 24621456.545 24620882 24624951 - gene protein_coding_gene TRUE TRUE AT5G61150.1|AT5G61150.2 VIP4 (VERNALIZATION INDEPENDENCE 4) Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to Os12g0579000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067127.1); similar to putative VERNALIZATION INDEPENDENCE 4 [Oryza sativa (japonica cultivar-group)] (GB:BAC79561.1); contains InterPro domain Leo1-like protein; (InterPro:IPR007149) -0.431581564957116 -3.38284657474488 0.00644482380479346 1 3.86580784694011 14.3017439706558 -0.431581564957116 0.162490670981126 AT5G41180_at 2.27880608099429 2.91437136806292 3.71108074690558 3.71911411206953 2.83371842047671 2.63697701800961 1.92703085041929 1.6445367101054 2.31454314383678 2.27672093508965 2.87021002204781 2.91169988119121 2.42638601872138 2.64608251213844 3.34364204546495 2.24377137589457 2.35305107567168 2.67850655803222 2.46761001479209 0.244653670372313 0.248410241595164 0.261915228508388 0.256650851015089 0.244653670372313 0.252903262503103 0.247386846661438 0.253040775355721 0.245564338459337 0.255388343022798 0.249672586078014 0.249183065743524 0.254896780020271 0.247915140604102 0.245448405443436 0.244653670372313 0.250266850671919 0.255776052851057 0.254170766078818 5 5 + 16503658 16504414 16504082.909 16501099 16504654 + gene protein_coding_gene TRUE TRUE AT5G41180.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G63430.1); similar to H0306F12.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86176.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.373802336404762 3.38276262203436 0.00644576174093852 1 3.86567882018301 5.22676777207281 0.373802336404762 0.125093253862236 AT5G44020_at 10.4649229913135 10.4599939499910 10.6999609804171 10.7884965918824 11.6017831601227 11.6739704605300 10.6662867551434 10.9690837992796 10.9770559141789 11.0182934506278 12.2428666102852 12.2759200999787 12.5808216774901 12.088059239058 12.1407521090718 12.0645382002569 11.7430307793953 12.1067141526625 11.0123192721862 0.0789047932104931 0.0770556019175391 0.0795686523816031 0.0825679294836187 0.0773807521217833 0.0765540858081108 0.0815123974023493 0.0769138437744858 0.0864215489198756 0.0773871945027246 0.0782319844812763 0.0781312705239477 0.076830285917013 0.0791189244165937 0.0834892128455604 0.0778740318363848 0.0825425193276714 0.0765540858081108 0.0787859058660507 5 5|0 +|/ 17729910 17731214 17730410.6 17729636 17731563 + gene protein_coding_gene TRUE TRUE AT5G44020.1 acid phosphatase class B family protein similar to acid phosphatase class B family protein [Arabidopsis thaliana] (TAIR:AT1G04040.1); similar to Plant acid phosphatase [Medicago truncatula] (GB:ABE84853.1); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028) 0.292112828274920 3.37729880741451 0.00650710673079727 1 3.85728025547453 22.4945093715128 0.292112828274920 0.0560119714131821 AT5G51180_at 7.43331348511357 7.15438922963325 8.32733479378916 8.28052759491842 8.59175765432101 8.64204496774373 6.91606273648448 6.90699478276587 5.70516455772112 6.4788306665356 7.40585684177956 7.58532932968747 7.63296832687057 7.21260255233806 7.34983070929198 7.02345719855209 7.75756106086051 6.789146619904 6.12882739268845 0.206983392644213 0.209735477598979 0.213630790388798 0.212769264324098 0.219574854114792 0.223019200864849 0.210173548871987 0.224459779602670 0.21258341590041 0.215266958247568 0.211299244983689 0.206983392644213 0.214409032632328 0.218969705343952 0.212842078858099 0.209269832565927 0.213457060600657 0.222219250145988 0.222790853419427 5 5|0 +|/ 20815503 20817130 20816325.375 20814243 20817440 + gene protein_coding_gene TRUE TRUE AT5G51180.1|AT5G51180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25770.1); similar to Os03g0726800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051137.1); similar to putative protein [Oryza sativa] (GB:CAC39063.1); similar to Os08g0143700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060979.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Protein of unknown function DUF676, hydrolase-like; (InterPro:IPR007751) 0.287154653328580 3.37708226527952 0.00650955026260621 1 3.85694735310079 14.5059872983756 0.287154653328580 0.0497364931970861 AT5G25490_at 2.06511476832556 2.04765788929616 2.19633120475513 2.49745360660571 1.96690197966365 1.97083954194890 2.41062350502919 2.12438072865849 3.09321701553608 2.35304957415617 2.41607913399464 2.16269061180664 1.87526153639910 2.16385755798272 3.07684408606491 2.46950171256531 2.59066541312386 3.09875267240834 2.37383115074215 0.188371335687314 0.193567494587696 0.191103621733871 0.191159985482811 0.185511999674430 0.197239385469934 0.187254530398649 0.187686292965380 0.206323956796956 0.185295297286353 0.190676942841951 0.185295297286353 0.193161718182319 0.185295297286353 0.185295297286353 0.192820653455859 0.195587076737326 0.191166887955788 0.185645212586609 5 5 + 8876661 8877304 8876859.455 8876489 8877816 + gene protein_coding_gene TRUE TRUE AT5G25490.1 zinc finger (Ran-binding) family protein similar to zinc finger (Ran-binding) family protein [Arabidopsis thaliana] (TAIR:AT3G15680.1); similar to GlimmerM protein 152 [Beta vulgaris] (GB:ABD83289.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876) -0.306498291820057 -3.37385553757042 0.0065460734412236 1 3.85198627336962 4.70411582171268 -0.306498291820057 0.0719645015543498 AT5G15160_at 5.18789943910083 5.60535077541938 4.73748294933648 5.21501079919353 6.60781311746862 6.10191042328247 6.35820936970861 7.13746745156414 2.68184917478221 4.33861691300963 5.07052631810198 6.62914047574083 5.43628802246747 5.7536871700317 5.12891302679904 4.4733938181046 4.8606973208634 4.54232226101214 4.65204293318699 0.239757639308155 0.237818398583641 0.246056378630418 0.244154708321781 0.234997071637091 0.27169685456803 0.240880066307328 0.238360866821867 0.248822569250030 0.239812527883700 0.238433420014091 0.242637531945423 0.240172179994987 0.250783037474886 0.243398240532228 0.242582510333335 0.256043755024570 0.238311713822204 0.237058545366825 5 5|0 -|/ 4921508 4922515 4921954.111 4921269 4922651 - gene protein_coding_gene TRUE TRUE AT5G15160.1 bHLH family protein similar to PRE1 (PACLOBUTRAZOL RESISTANCE1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G39860.1); similar to Os03g0171700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049114.1); similar to Os03g0171300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049112.1); similar to hypothetical protein LOC_Os10g26460 [Oryza sativa (japonica cultivar-group)] (GB:ABB47567.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.48447941586068 -3.37371211352448 0.00654770172264927 1 3.8517657399826 10.4327467366175 -0.48447941586068 0.194675279422567 AT5G65140_at 6.31864326929139 6.46095114035526 8.06063116080503 8.3405821529224 7.94523602110976 7.63706352021333 7.19744916463523 7.18282229227127 2.66169889841227 3.22481131358519 2.97961958096661 4.17535337489131 5.13083811917297 3.88161725758098 3.06502416568894 5.41973682650359 4.95567032320077 3.73414432281773 2.50553936859313 0.322728900772658 0.32013740519861 0.32013740519861 0.32013740519861 0.335170790068726 0.32013740519861 0.321348175475442 0.327731790476558 0.339321820370292 0.328196385419557 0.324835105289102 0.32013740519861 0.320310848041299 0.32013740519861 0.329448650115374 0.32013740519861 0.326028706807888 0.32118140455412 0.334032101033465 5 5|0 -|/ 26037276 26038134 26037830.25 26036814 26039448 - gene protein_coding_gene TRUE TRUE AT5G65140.1 trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G10100.1); similar to 117M18_9 [Brassica rapa] (GB:AAZ66928.1); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337); contains InterPro domain HAD-superfamily hydrolase subfamily IIB; (InterPro:IPR006379) 0.310590602747037 3.37096811432732 0.00657893426284156 1 3.84754616009445 10.8754725184753 0.310590602747037 0.0761850085791832 AT5G54800_at 7.02895378801292 7.03712705846085 8.07340465673544 7.83936093105465 8.3128135439516 7.8689843101672 7.61902207727562 7.68217147862098 6.4084979110716 6.7166078348033 8.42041388182363 8.56937477829274 8.54499540706335 8.644570407665 7.85574944596406 8.51646283840925 7.85419953905403 8.27370699695844 6.11681580672371 0.214406934141611 0.203914257994140 0.206088284672002 0.201760752068628 0.203474500272982 0.211643642694470 0.210938869850416 0.200182153378928 0.215543698471117 0.207057413391058 0.20095198467551 0.207480300414823 0.199516496612628 0.214307833568644 0.199855685448645 0.199079951409482 0.242766593933126 0.200676001208885 0.212632739171088 5 5|0 +|/ 22279598 22280503 22280048 22278497 22281147 + gene protein_coding_gene TRUE TRUE AT5G54800.1 GPT1 (glucose-6-phosphate transporter 1); antiporter/ glucose-6-phosphate transporter glucose6-Phosphate/phosphate transporter 1 Identical to Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor (GPT1) [Arabidopsis Thaliana] (GB:Q9M5A9;GB:Q8LCH1;GB:Q9FFU8); similar to GPT2 (glucose-6-phosphate/phosphate translocator 2), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT1G61800.1); similar to glucose-6-phosphate/phosphate-translocator precursor [Pisum sativum] (GB:AAC08525.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696) 0.32299133939069 3.36902397273949 0.00660115518314701 1 3.84455619365799 15.0571837369199 0.32299133939069 0.0875279462904639 AT5G45140_at 4.36221238236642 3.98074497397057 5.12537773178094 4.59046697141058 4.45349543580568 4.39623120646845 4.20003341482206 4.47798940658792 3.61237182377994 4.34998293575716 4.83756583484486 4.84581870921746 4.3019388105953 4.84395650265309 4.61804161276803 4.87395250468085 5.38663957221336 5.08778819430842 4.87782356164107 0.214972628852582 0.215799756708437 0.223471480010416 0.215616881874010 0.217959553303598 0.217927027497662 0.213318893148753 0.213318893148753 0.228209652858238 0.213318893148753 0.214410400138824 0.214365286490480 0.218869955528025 0.21925498758173 0.213318893148753 0.213318893148753 0.215390070793106 0.221867925448766 0.220018895461670 5 0|5 /|- 18264898 18265643 18265216.75 18264455 18275365 - gene protein_coding_gene TRUE TRUE AT5G45140.1 NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase Encodes a subunit of RNA polymerase III (aka RNA polymerase C). similar to NRPB2 (EMBRYO DEFECTIVE 1989), DNA binding [Arabidopsis thaliana] (TAIR:AT4G21710.1); similar to RNA polymerase III subunit RPC2 (ISS) [Ostreococcus tauri] (GB:CAL50515.1); similar to DNA-directed RNA polymerase III 130 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96484.1); similar to putative RNA polymerase III [Oryza sativa (japonica cultivar-group)] (GB:AAP03366.1); contains InterPro domain RNA polymerase beta subunit; (InterPro:IPR007644); contains InterPro domain RNA polymerase Rpb2, domain 7; (InterPro:IPR007641); contains InterPro domain RNA polymerase Rpb2, domain 2; (InterPro:IPR007642); contains InterPro domain RNA polymerase Rpb2, domain 6; (InterPro:IPR007120); contains InterPro domain RNA polymerase Rpb2, domain 4; (InterPro:IPR007646); contains InterPro domain RNA polymerase Rpb2, domain 3; (InterPro:IPR007645); contains InterPro domain RNA polymerase Rpb2, domain 5; (InterPro:IPR007647); contains InterPro domain RNA polymerase, beta subunit; (InterPro:IPR007121) -0.369971077334338 -3.36424455592893 0.00665611022716352 1 3.83720447002853 9.01308001942803 -0.369971077334338 0.123850282928732 AT5G01950_at 6.13817053598466 5.93876766840331 6.4319922962531 6.21570871222017 6.5245951264248 6.31603775003994 4.6533431242057 4.31320681325052 6.13797992986189 5.30523459781602 5.76467696168548 6.21661614905192 5.56432178978786 6.30278702717879 5.77965893138457 6.0132546062131 5.1999634845054 6.3923493011185 5.45575658568775 0.183766806931425 0.174223972285196 0.174223972285196 0.184556754007489 0.178856223897857 0.175559944430565 0.190594809052430 0.195190479847968 0.183296274101360 0.177900225128146 0.178477696611830 0.180088610422121 0.183750274229257 0.185027986227583 0.187977915912134 0.178453652817334 0.188630308027463 0.174223972285196 0.176880893741827 5 5|0 -|/ 365061 365602 365286.3 364899 370183 - gene protein_coding_gene TRUE TRUE AT5G01950.1 ATP binding / kinase/ protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G37450.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G53590.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G06840.1); similar to Protein kinase; Adipokinetic hormone [Medicago truncatula] (GB:ABE77704.1); similar to Protein kinase [Medicago truncatula] (GB:ABE77702.1); similar to unkown protein [Oryza sativa (japonica cultivar-group)] (GB:AAW56867.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.320511494371602 -3.36412129417297 0.00665753371485984 1 3.83701484411556 11.5850747045916 -0.320511494371602 0.0857850282009484 AT5G52210_at 6.36692490903329 6.41762526165425 7.55963099578783 7.52856132675062 7.7570305826755 7.68989659798353 5.94407437664896 5.38118592409206 5.91119996874885 4.74693477573001 6.65883919031635 6.57236703514387 6.14881658422627 6.4774727774639 6.57130014079198 5.89337186818435 6.57751428898542 6.52479725703651 5.15850686939235 0.222019312495574 0.215645646753779 0.218070314720374 0.217165889507673 0.211676072981876 0.211633131201186 0.222746909850933 0.221472018844800 0.221320831017239 0.222401341166292 0.216815615112535 0.216165508524876 0.220266359546499 0.21633722173679 0.219037458084779 0.221561824846583 0.218129453963315 0.213013242746919 0.232091461306887 5 5|0 +|/ 21223016 21224041 21223586.4 21222217 21224324 + gene protein_coding_gene TRUE TRUE AT5G52210.1|AT5G52210.2 ATGB1 (Arabidopsis thaliana GTP-binding protein 1); GTP binding|ATGB1 (Arabidopsis thaliana GTP-binding protein 1) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. similar to ATARFA1E (ADP-ribosylation factor A1E), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT3G62290.1); similar to ARF1A1c (ADP-RIBOSYLATION FACTOR 1), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT2G47170.1); similar to ATARFA1B (ADP-ribosylation factor A1B), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT5G14670.1); similar to Os07g0620400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060300.1); similar to GTP-binding protein [Oryza sativa] (GB:AAC05675.1); similar to Os03g0392300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050283.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.335902763522544 3.36353514786171 0.00666430709560443 1 3.83611310000986 12.6807531288577 0.335902763522544 0.098639068337335 AT5G41340_at 8.85715503142995 9.06878803429635 9.6575197001657 9.86030389333618 10.2326724665073 9.9303026537126 9.33021212319236 9.23039407830081 8.4885921923623 8.5209808168494 9.85754093324855 9.60704067037083 9.87128652426173 9.84500454996761 9.77784214613704 10.0315755446463 9.79755806746711 9.94238800726116 8.67368034409802 0.0957102034468412 0.0924208560402973 0.0944054851857597 0.0937653373410253 0.097166995234269 0.0950846963788825 0.0925105268221886 0.0951324165845828 0.102514913911924 0.101827448815577 0.0920790460680225 0.0949792652983458 0.0935144683769567 0.0969560119159 0.0951817861764706 0.0935711849615351 0.098962375429961 0.0944403592160882 0.0968743955105903 5 5|0 -|/ 16556105 16557160 16556467.714 16555309 16557358 - gene protein_coding_gene TRUE TRUE AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. Identical to Ubiquitin-conjugating enzyme E2-21 kDa 1 (EC 6.3.2.19) (Ubiquitin- protein ligase 4) (Ubiquitin carrier protein 4) (UBC4) [Arabidopsis Thaliana] (GB:P42748;GB:Q9FN66); similar to UBC5 (ubiquitin-conjugating enzyme 37), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G63800.1); similar to ubiquitin conjugating enzyme (GB:AAA32900.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.308222189769972 3.35987349041889 0.00670678068802966 1 3.8304792872076 18.7221005008793 0.308222189769972 0.0748951120872509 AT5G42600_at 2.46968100228946 2.80914514909979 2.81832958633409 2.87214301180058 2.23580365366474 2.84127681228310 2.51418630445555 2.61173284022843 3.32950491681668 3.32997233526176 2.91106682627179 2.96581892465028 3.4370553917024 3.17724081131733 3.35375189616316 3.01117622809146 3.00368561616435 3.89614505169233 2.99836628857585 0.221118107469962 0.219568249577433 0.219004780252893 0.214630973941226 0.218268589796733 0.224675998668604 0.213902159079461 0.220394030689635 0.216270382084231 0.219274505817383 0.216076242000224 0.225573496731483 0.220797986752951 0.223579349520654 0.216202774035839 0.213855449122704 0.227436696570821 0.225267197079822 0.215069274555288 5 5 + 17074505 17075169 17074827.545 17070745 17075473 + gene protein_coding_gene TRUE TRUE AT5G42600.1 MRN (MARNERAL SYNTHASE); catalytic similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT4G15370.1); similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT1G78500.1); similar to ATPEN1 (Arabidopsis thaliana pentacyclic triterpene synthase 1), catalytic/ lyase [Arabidopsis thaliana] (TAIR:AT4G15340.1); similar to beta-amyrin synthase [Euphorbia tirucalli] (GB:BAE43642.1); similar to beta-Amyrin Synthase [Panax (GB:BAA33722.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpene synthase; (InterPro:IPR002365); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) -0.365873541339612 -3.35528026681638 0.0067604527851277 1 3.82341067854275 5.86592418175683 -0.365873541339612 0.121661842848739 AT5G16260_at 6.77093372654418 6.95772068455099 7.6582809744294 7.68316251759118 8.33850917979067 7.94931195730223 6.84979153440777 6.96224449390938 5.79020312769473 5.74686828736714 5.90282738004408 6.21940845257224 6.73932922459985 6.51941754157404 6.09133637289519 6.71340512396791 6.5873342229603 6.10126261222216 6.21644099713062 0.218342993875729 0.224874411208476 0.227250110523527 0.226227910634378 0.221430947190905 0.234004008942870 0.221808624277906 0.223653897729945 0.234171815243401 0.225648263596673 0.226124274490196 0.218501715653901 0.219911995875263 0.218342993875729 0.219440710787375 0.221463878821173 0.228487671850196 0.224901181048284 0.226094575374521 5 5|0 +|/ 5313782 5315454 5314725.667 5311210 5315770 + gene protein_coding_gene TRUE TRUE AT5G16260.1 RNA recognition motif (RRM)-containing protein similar to H0306B06.5 [Oryza sativa (indica cultivar-group)] (GB:CAH67490.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.310208463814559 -3.35382929070322 0.00677749889900141 1 3.82117739785691 13.5348081771084 -0.310208463814559 0.077320507148964 AT5G63320_at 7.1507394572969 7.06090547275615 7.54175888525509 7.52175318203888 7.94274281315332 7.69078192056512 6.77268277369692 6.9079060721981 7.26059729198095 7.44388347211449 8.46261580120294 8.7557248556413 7.9728461741739 7.91142078034751 7.96573655055272 8.3542338562692 7.44746492802048 7.67912977248006 7.45193017611814 0.203577968547824 0.199572114231653 0.204238044037763 0.209195517797518 0.202516194540487 0.212224292653357 0.204460319892580 0.201054234699687 0.21544407719772 0.201588797308643 0.199464671363350 0.195399567563305 0.20283226906227 0.203726972041578 0.195399567563305 0.19679210268284 0.215326373178173 0.206353912639107 0.201131273068894 5 5 - 25391666 25392070 25391847.545 25391639 25393813 - gene protein_coding_gene TRUE TRUE AT5G63320.1 similar to GTE8 (GLOBAL TRANSCRIPTION FACTOR GROUP E8), DNA binding [Arabidopsis thaliana] (TAIR:AT3G27260.1); similar to putative bromodomain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD08859.1); contains domain FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS (PTHR22880); contains domain GCN5 GENERAL CONTROL OF AMINO-ACID SYNTHESIS 5-LIKE 2, GCNL2 (PTHR22880:SF2) -0.286623921901344 -3.35085834475413 0.00681253927493522 1 3.81660413341333 15.0507172737403 -0.286623921901344 0.0519855763022911 AT5G27750_at 3.29089214802899 3.31348584318921 4.39719771951571 4.45977338323563 5.37492999494685 4.32942018089179 3.607800135177 3.18894635859919 3.21480696971428 3.30471411695698 4.19158395839976 4.26590200228147 4.47951618136978 4.3023410433304 3.99656522616964 4.35331016474294 3.97333227732277 4.24974802751493 2.92103539379948 0.234097876928934 0.232034079897288 0.238763420675888 0.243035770451273 0.235524682562099 0.241544657824788 0.229461461008144 0.229469604429049 0.237604953950844 0.233556604177437 0.231365425478129 0.229574405579992 0.233500565954228 0.229907060533459 0.232135450557318 0.228750366549259 0.230147118434598 0.233035520377783 0.240365329096390 5 5 + 9829261 9829943 9829661.364 9828241 9830165 + gene protein_coding_gene TRUE TRUE AT5G27750.1 F-box family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13780.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.481965821973259 3.34934189888416 0.0068304962992204 1 3.81426956005927 7.68200048059723 0.481965821973259 0.195249490710924 AT5G52430_at 3.59499432419803 4.14186929011885 3.39076952749326 3.60013029136408 4.07857482379483 3.76472967573755 3.93152241779744 3.39664904709210 3.53433211978962 3.94961651795413 5.51336061696397 5.17872696994101 4.58524850398506 4.80316394200669 4.43546210698367 4.39099424886132 3.39840615420971 4.18526013520156 4.03956932531041 0.22630869294315 0.2236177705646 0.226773197201081 0.230596815379565 0.221145525620683 0.236351027095451 0.220725903969832 0.228714409642538 0.250435681184111 0.220981054769809 0.22810021550545 0.226992264169600 0.222318920656959 0.226880700977619 0.231170387352187 0.223014623739706 0.232033025412911 0.234957990689442 0.223137658460620 5 5 - 21300327 21300864 21300691.818 21299976 21302497 - gene protein_coding_gene TRUE TRUE AT5G52430.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to Os02g0822000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048555.1); similar to unknown [Thellun (GB:ABJ98061.1) -0.403652885124804 -3.34853788815883 0.00684003668178189 1 3.81303171088694 7.93865516925977 -0.403652885124804 0.147603805815734 AT5G45230_at 2.26447149034345 2.5206603157152 2.81119885117523 2.99247459607661 2.45864244823183 2.74575295404724 2.37723937229403 2.60025201645260 2.93028231288322 2.83482141539125 2.60961684815354 2.65172229103837 2.7155134026531 2.7334910960927 2.19710978300553 2.63347842677819 2.90108455097980 2.99756986815245 3.08575067488726 0.194675374945124 0.195560149707743 0.191500799671591 0.192206270175149 0.194578011866554 0.197694589494589 0.191500799671591 0.191500799671591 0.204883521824961 0.196267679293863 0.195945538243619 0.191500799671591 0.200836511403179 0.191826505259212 0.200988940117307 0.198529990906420 0.202410395661081 0.206014454148311 0.191500799671591 5 5 - 18319463 18320054 18319842.818 18319374 18325530 - gene protein_coding_gene TRUE TRUE AT5G45230.1 disease resistance protein (TIR-NBS-LRR class), putative similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G17060.1); similar to TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81441.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984) -0.315905553348542 -3.34738189365 0.00685377764188963 1 3.81125186269362 5.41145304774733 -0.315905553348542 0.083113219047678 AT5G16870_at 4.89440883636482 4.89367051051798 5.35134378555775 5.62678112621334 5.87345062108848 5.40556926686321 5.20480188022159 4.83400808505027 4.59250452371051 4.42255402548644 4.9468480568231 5.12575958968388 5.16264003576787 4.94266499940239 5.30350103831051 4.60587500665167 4.93249712579236 4.9740876038658 4.3680716064624 0.203278309807715 0.191954762298228 0.201252511122295 0.194856489082417 0.202072361494935 0.197717795822674 0.194120157672292 0.198309765229066 0.210552290462998 0.206338859653377 0.191954762298228 0.194815876446165 0.191954762298228 0.201458713980171 0.205219307737894 0.191954762298228 0.205972404055605 0.200202276780025 0.201239511236254 5 5|0 -|/ 5547593 5548519 5548264.667 5546814 5548739 - gene protein_coding_gene TRUE TRUE AT5G16870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03010.2); similar to Os04g0652900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054102.1); similar to hypothetical protein DKFZp434A1535.1 - human (fragment) (GB:T46479); similar to Bcl-2 inhibitor of transcription isoform a [Homo sapiens] (GB:NP_001015509.1); contains InterPro domain Peptidyl-tRNA hydrolase, PTH2; (InterPro:IPR002833) -0.354010480476824 -3.34673819953076 0.00686144130098534 1 3.81026074264904 9.99064304761317 -0.354010480476824 0.113778312068400 AT5G61170_at 9.2604678425674 9.16874016367645 9.52695684761018 9.56973629395304 9.47644200014967 9.2113060061788 9.69279884516724 9.55613331052355 8.29671038155765 8.70456971227307 9.4296238668571 10.0065076369216 9.18321151837294 9.12832116847833 10.2338792262727 8.99994964294823 9.098503212115 9.1091757564107 8.50217851872342 0.115827588933364 0.113514536713766 0.119384523525797 0.116666669159834 0.112366889355010 0.113435098944284 0.113776331685003 0.123096649859382 0.138329958942093 0.116651972974694 0.117652373150807 0.116822952709399 0.119764017996385 0.140357346949496 0.116682652830140 0.118245116077971 0.126423955323171 0.120138701176036 0.112366889355010 5 5|0 +|/ 24628400 24629403 24628927.444 24628312 24629653 + gene protein_coding_gene TRUE TRUE AT5G61170.1 40S ribosomal protein S19 (RPS19C) Identical to 40S ribosomal protein S19-3 (RPS19C) [Arabidopsis Thaliana] (GB:Q9FNP8); similar to 40S ribosomal protein S19 (RPS19B) [Arabidopsis thaliana] (TAIR:AT5G15520.1); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to 40S ribosomal protein S19-like [Solanum tuberosum] (GB:ABB87116.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) -0.288247543309006 -3.34667196789547 0.00686223033622582 1 3.81015876150263 18.3827223509275 -0.288247543309006 0.0545104642875591 AT5G58520_at 6.70605649459096 6.33026024553761 7.52409817640677 7.13311879290258 7.28574601767708 7.45243221144944 6.71807326437802 6.83593432962253 7.05140275244125 7.29528392944542 7.79288487118921 7.59946625279214 7.81582758261003 8.04283129495065 7.37021999459765 8.00047493267247 8.16126847905737 7.61259870050162 7.0903855112832 0.179147617661684 0.187606169661009 0.177372940792705 0.180257480374867 0.178781347474909 0.178589685192578 0.173640861248304 0.177310689239820 0.193100119462056 0.175520561679617 0.172958109872442 0.172174093777120 0.182009545302621 0.178281901942243 0.173305356536160 0.172862066184885 0.180727293595207 0.171221584252411 0.177416185098868 5 5|0 +|/ 23673919 23675122 23674701.444 23672460 23675388 + gene protein_coding_gene TRUE TRUE AT5G58520.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07140.1); similar to Os03g0295600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049825.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95434.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) -0.33622727677511 -3.34618947594905 0.0068679811992966 1 3.80941582718081 14.4707835638721 -0.33622727677511 0.100276661507700 AT5G23540_at 9.95015633384115 9.99288773683403 10.9010388161352 10.8665589029204 10.6567377491321 10.5321308065972 9.7913469813268 9.6834187017778 9.69644776741552 9.25898253232911 10.5506865284751 10.3643340688250 10.3536850705322 10.4026082278506 10.4805554353315 10.3342529162909 10.3158935603147 10.3826909721149 9.32005317934124 0.0671989703328345 0.0708640476274274 0.0698727920762395 0.0681123948292693 0.0708997447927062 0.0715006989970364 0.0696142708647295 0.0707133610130019 0.070647610988361 0.0736624551246847 0.0670285909652421 0.0670285909652421 0.0678325975102444 0.0697741638055187 0.0679535599971189 0.0681388630022897 0.0726154455064162 0.0670285909652421 0.0687659036652603 5 5|0 +|/ 7938391 7939308 7938911.8 7937672 7939578 + gene protein_coding_gene TRUE TRUE AT5G23540.1|AT5G23540.2 26S proteasome regulatory subunit, putative Identical to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11) (RPN11) [Arabidopsis Thaliana] (GB:Q9LT08;GB:Q8LD11); similar to AJH2 (COP9-signalosome 5B), protein binding [Arabidopsis thaliana] (TAIR:AT1G71230.1); similar to Mov34-1; Flagellar motor switch protein FliG-like [Medicago truncatula] (GB:ABE79516.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639); contains InterPro domain Flagellar motor switch protein FliG-like; (InterPro:IPR011002) 0.272543173508518 3.34546043065227 0.006876680124959 1 3.8082932195896 20.2084092571517 0.272543173508518 0.0300688346591808 AT5G05450_at 2.23404012023480 2.8933490588443 2.87898837871658 3.02422951045078 3.39946052838373 3.30736574826452 2.50493871921464 2.46002241945985 2.87531680181944 2.96741823649336 4.13479414607553 4.33903438488218 4.17473353641212 3.64323252051767 4.00711364694971 4.06704226174487 3.14980400774537 2.87094789410114 2.55016128138302 0.20750189122122 0.204282913319290 0.208187761075067 0.207413214822594 0.205781328557397 0.211718017362176 0.200256821474884 0.222423322841046 0.210787270802247 0.217040156201606 0.205095976726709 0.200786785496901 0.200009307214995 0.221471977879456 0.212544914997385 0.200009307214995 0.218462758624707 0.208540493491273 0.211160246634025 5 5|0 +|/ 1614167 1615063 1614647.111 1612007 1615357 + gene protein_coding_gene TRUE TRUE AT5G05450.1 DEAD/DEAH box helicase, putative (RH18) Identical to DEAD-box ATP-dependent RNA helicase 18 (EC 3.6.1.-) (RH18) [Arabidopsis Thaliana] (GB:Q9FLB0;GB:Q9ZS03); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT1G71370.1); similar to Os01g0164500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042102.1); similar to ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL56961.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) 0.359512196152713 3.34172881100688 0.00692138273137072 1 3.80254651409568 6.13578426363057 0.359512196152713 0.118170131721647 AT5G06170_at 2.51986789969928 3.09888016928735 2.65946779588577 3.14072914570045 2.57246658290540 2.75000733599326 2.52283168369134 2.5501583375216 3.00402572113854 2.60452819268566 2.42266059863439 2.48765207881876 2.40198028705189 2.7379822011124 2.40500814171165 2.48461716409079 2.88038790161128 2.24151278902162 2.57411751823588 0.195975303828539 0.206101051209047 0.195594220158861 0.203052147124432 0.194422359860019 0.200192266117842 0.198612860879646 0.192160398467892 0.190940398686303 0.203516695788867 0.192769578821398 0.207997234023825 0.194122770604232 0.195025048337845 0.201391885124977 0.190986535384033 0.193095023392231 0.196795888915803 0.191864567498008 5 5 + 1870748 1871689 1871063.091 1869792 1871720 + gene protein_coding_gene TRUE TRUE AT5G06170.1 ATSUC9 (SUCROSE-PROTON SYMPORTER 9); carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter Identical to Sucrose transport protein SUC9 (Sucrose permease 9) (Sucrose-proton symporter 9) (SUC9) [Arabidopsis Thaliana] (GB:Q9FG00); similar to ATSUC8 (SUCROSE-PROTON SYMPORTER 8), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT2G14670.1); similar to ATSUC6 (SUCROSE-PROTON SYMPORTER 6), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43610.1); similar to ATSUC7 (SUCROSE-PROTON SYMPORTER 7), carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G66570.1); similar to sucrose transporter SUC2 [Brassica oleracea] (GB:AAL58072.1); similar to sucrose carrier [Ricinus communis] (GB:CAA83436.1); similar to sucrose transporter SUC1 [Brassica oleracea] (GB:AAL58071.1); contains InterPro domain Sucrose/H+ symporter, plant; (InterPro:IPR005989); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701); contains InterPro domain Sucrose/H+ symporter; (InterPro:IPR013002) -0.382149076890901 -3.3416415501413 0.00692243162108726 1 3.80241211939336 5.34444226347387 -0.382149076890901 0.133950923285385 AT5G23900_at 9.25834445782615 9.5598686611957 9.60292304917386 9.65485476188777 9.84856749346462 9.92323151965592 9.35353979802546 9.4437986846729 9.43753509009807 9.56760806325308 10.2044576141384 10.1809816817096 10.0209912698889 9.85174322592656 10.5940645616096 9.7655526243864 9.81418979164493 9.84881491996176 9.72232957886203 0.109366396944389 0.104318422994136 0.103791502849131 0.099911318692066 0.103929356418629 0.106199704999386 0.104297903489857 0.107332337123101 0.110625459639332 0.103961210180537 0.106807994509264 0.101882788466179 0.105062528368773 0.112499563462777 0.102933014335560 0.105975146952685 0.107451639524431 0.108356212108309 0.100043973764934 5 5|0 -|/ 8064205 8065031 8064565.7 8063988 8065526 - gene protein_coding_gene TRUE TRUE AT5G23900.1 60S ribosomal protein L13 (RPL13D) Identical to 60S ribosomal protein L13-3 (RPL13D) [Arabidopsis Thaliana] (GB:Q9FF90); similar to ATBBC1 (breast basic conserved 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G49010.3); similar to 60S ribosomal protein L13-2 (Cold-induced protein C24B) (GB:P41129); contains InterPro domain Ribosomal protein L13e; (InterPro:IPR001380) -0.28956908586 -3.34138423350939 0.00692552555704786 1 3.80201581016397 19.3861029058525 -0.28956908586 0.0566962394823549 AT5G38340_at 1.87041503385016 2.01083584413250 1.67527935601527 1.79420183852782 1.49518855597587 1.46530584134006 1.53139993173751 1.75287022308357 1.9863608738339 2.07653951042246 1.49096200358794 1.89562204994507 2.08056630591011 1.69822045271136 1.90004663159127 1.42166498680472 1.82628766880635 2.43099724082696 1.78231992519959 0.219867615515257 0.230176236843616 0.221654649003053 0.227434534936423 0.229009111655372 0.225062123812898 0.227764523996651 0.225681819731597 0.229056280949329 0.227848599260268 0.226552484591693 0.225304196621428 0.225527661288787 0.222891560958059 0.219867615515257 0.221757733926165 0.226901812886381 0.226453900075750 0.226358667934456 5 5 + 15340731 15341174 15340968.273 15337737 15341291 + gene protein_coding_gene TRUE TRUE AT5G38340.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G38350.1); similar to RPP1 (RECOGNITION OF PERONOSPORA PARASITICA 1) [Arabidopsis thaliana] (TAIR:AT3G44480.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G65850.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.284271823581659 -3.34003712281879 0.00694174615324712 1 3.79994095972215 3.59516342175365 -0.284271823581659 0.050097046834416 AT5G20560_at 2.15597521348958 2.09773615925934 2.01317477100990 1.95175867363817 1.49082697926203 2.35947749042657 2.20542645916832 2.38860850522345 2.67169953189435 2.34107586377031 2.62189908007421 2.46184708071131 2.41004617536544 1.92160810969764 2.84357468084358 2.47424204401636 2.37943822524677 2.43911726232734 2.65695719339922 0.207428674688549 0.208981344304207 0.206028039462271 0.213861133590621 0.215928016443467 0.203526216072115 0.22084371475799 0.209816004949038 0.207121604627704 0.212112747552294 0.204398179940141 0.212428784391314 0.207157568825380 0.205121609420927 0.206419086295825 0.20544650870141 0.211149438261557 0.207588126232042 0.213115281025915 5 5 + 6955839 6956209 6956002.818 6955370 6956383 + gene protein_coding_gene TRUE TRUE AT5G20560.1 beta-1,3-glucanase, putative similar to BETAG4 ("beta-1,3-glucanase 4"), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20330.1); similar to Os01g0801500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044540.1); similar to beta-1,3-glucanase [Musa x paradisiaca] (GB:ABJ98942.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.413017866989175 -3.3391909678599 0.00695195462845083 1 3.79863762227061 4.58314758742132 -0.413017866989175 0.154326836409353 AT5G49950_at 7.46071389991666 7.46851594739615 8.66485550144215 8.53269042218803 8.28971039167736 8.38175168025862 7.26737525023306 7.33275143673327 5.66638779725886 6.2802940778913 7.69741207380776 7.64891351845085 7.58254282289376 7.67502779077263 6.93983395366141 7.92660010643478 7.45426095177389 7.65750338313709 6.41698968124424 0.20223922386773 0.195004024614796 0.196201542254456 0.206263935412170 0.198596014987213 0.193936879898972 0.195501780256730 0.195463909821221 0.224241909020857 0.208553575847750 0.199070196044913 0.193261973503871 0.196087553020397 0.200459103217838 0.202166209293963 0.189755456202413 0.215922939761531 0.19582718476483 0.197045467601129 5 5|0 -|/ 20337130 20338436 20337630.4 20336959 20340842 - gene protein_coding_gene TRUE TRUE AT5G49950.1 embryogenesis-associated protein-related similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G34340.1); similar to Embryogenesis-associated protein EMB8 (GB:Q40863); similar to Os05g0432600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055633.1); similar to Os01g0871100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044934.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.271802749316848 3.33613305899408 0.00698897532705528 1 3.79392705601685 14.7717884048547 0.271802749316848 0.0301105789249652 AT5G14520_at 7.4991104126655 7.84188316730953 8.35257904074423 8.34412348778917 8.2209107953115 8.25152023465077 7.37734354805398 7.66506838842977 6.10797536601986 6.29873356119581 6.46160989727967 7.13565184251213 7.26238942189797 6.82678061515204 7.22189692133251 7.52299744982942 7.4226412338091 6.99371790713201 6.84919805693191 0.201048339637462 0.215141484134775 0.208815910977343 0.217499347086119 0.202883812318213 0.226622810093185 0.209927765223412 0.205992397100733 0.259346786096821 0.217898239147994 0.208869365199794 0.201653443134067 0.201048339637462 0.207918269739767 0.205632214393550 0.203844632973784 0.222281873028686 0.218271775828513 0.210318297524058 5 5|0 -|/ 4681060 4681654 4681358.333 4680699 4684333 - gene protein_coding_gene TRUE TRUE AT5G14520.1 pescadillo-related similar to BRCT; Pescadillo, N-terminal [Medicago truncatula] (GB:ABE82103.1); similar to Os03g0699200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050986.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain Pescadillo, N-terminal; (InterPro:IPR010613) -0.308523600827647 -3.33195867912967 0.00703983894514066 1 3.78749548295044 14.7063655456196 -0.308523600827647 0.0776410437216454 AT5G23110_at 6.82617792818686 6.67923495162367 7.13171533043268 7.45995323776486 7.45512525070217 7.14979974813343 6.06048038894521 6.1452074557036 6.34856562467218 6.64399203040457 7.3396627907652 7.34231665670634 7.63068292865845 7.13394274180082 6.51808516682707 7.22098666045041 7.07343137327524 6.82660043107273 6.68010538611648 0.171081138659622 0.168311001038123 0.167118826604579 0.161968545476163 0.169493539014903 0.166344075131195 0.172282707797263 0.171969772773976 0.173933422103505 0.166997465687184 0.176959377308821 0.161968545476163 0.164795330147492 0.185096714852656 0.174216590773519 0.161968545476163 0.180727682481323 0.179165862989735 0.164486171477817 5 5|0 +|/ 7774634 7775483 7774963.8 7758310 7775674 + gene protein_coding_gene TRUE TRUE AT5G23110.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G73950.1); similar to Os04g0675200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054245.1); similar to H0103C06.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86102.1); similar to OSJNBa0018M05.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE03243.2); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.314256847478372 -3.33187349332616 0.00704088084876293 1 3.78736422144102 13.7100957568160 -0.314256847478372 0.0829462215351363 AT5G17570_at 3.38295493536096 3.56534512752272 5.34401856279366 4.70561256511103 5.81945067914371 5.12057912561021 4.72091033368072 4.06983584922265 2.8289522497634 3.54448095147086 4.5735722829666 4.68656563140253 4.53644040845964 4.42317740188461 4.51734070163876 4.64574753055803 5.16857158750951 4.14106982179956 3.57784419577794 0.215408151317249 0.219355826309261 0.220420154065631 0.215931969015091 0.215300523530658 0.22254635222611 0.213507291077947 0.218660128030235 0.232537076095318 0.214840185222684 0.215256087631507 0.217391135829610 0.215292088784633 0.215315434774067 0.213677085373783 0.213507291077947 0.217278545135685 0.221620880278329 0.220689825671561 5 5 + 5793693 5794534 5794081.364 5792928 5794794 + gene protein_coding_gene TRUE TRUE AT5G17570.1 tatD-related deoxyribonuclease family protein similar to tatD-related deoxyribonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G03500.1); similar to Os04g0577500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053632.1); similar to H0404F02.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66729.1); contains InterPro domain TatD-related deoxyribonuclease; (InterPro:IPR001130) 0.489070263818874 3.32656780112586 0.00710608680257527 1 3.77918769741337 8.54291496552978 0.489070263818874 0.201305634625853 AT5G43360_at 1.34252802524709 1.25228819151402 0.934215105097305 1.29862930688577 0.952780859793658 1.25546994640434 1.00187306840617 1.25962480724253 1.82884689916904 1.89067491693500 1.45974705923053 1.14971729556622 1.36965548359925 1.49516930519551 1.54640949379844 1.29198819263749 1.68924890010262 1.67459934542396 1.73756410687342 0.208278217486479 0.208196575009373 0.211870028664053 0.209610269210521 0.206720093119242 0.206032491931707 0.205001416060099 0.203093412126831 0.204580829859251 0.203093412126831 0.203093412126831 0.209086183025172 0.203093412126831 0.208287362231804 0.206145717928057 0.203093412126831 0.203093412126831 0.209921101822144 0.212776541701988 5 5 + 17427871 17428349 17428118.545 17426752 17428442 + gene protein_coding_gene TRUE TRUE AT5G43360.1 PHT3 (phosphate transporter 3); carbohydrate transporter/ phosphate transporter/ sugar porter phosphate transporter Identical to Inorganic phosphate transporter 1-3 (AtPht1;3) (H(+)/Pi cotransporter) (PHT1-3) [Arabidopsis Thaliana] (GB:O48639;GB:O04381); similar to ATPT1 (PHOSPHATE TRANSPORTER 1), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43350.1); similar to PHT2 (phosphate transporter 2), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43370.1); similar to ATPT2 (PHOSPHATE TRANSPORTER 2), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT2G38940.1); similar to inorganic phosphate transporter [Solanum tuberosum] (GB:AAD38859.1); similar to inorganic phosphate transporter [Lycopersicon esculentum] (GB:AAB82146.1); similar to inorganic phosphate transporter [Nicotiana tabacum] (GB:AAF74025.1); contains InterPro domain Phosphate permease; (InterPro:IPR004738); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.326675617077895 -3.3202931993777 0.00718399932149498 1 3.76951532024394 2.80147392654223 -0.326675617077895 0.0946274516822721 AT5G57930_at 10.1763244381975 10.2959790116824 10.6804525464181 10.7454592680022 10.8309711367547 10.6939160820119 10.5529166668317 10.5418749353476 10.4140077362126 10.6995713317250 10.8937568881625 10.9986985828274 10.7631090807524 10.8907937394619 10.9621249104414 11.1368638815284 10.7339816112318 10.8692629776914 10.6220996831718 0.070307542095544 0.0688948186362285 0.0704538516767586 0.0697979086245003 0.0685782332968995 0.0719431968835157 0.0700147564865174 0.0685782332968995 0.0777648727546123 0.0694432741242727 0.0704083265115058 0.0685782332968995 0.0712386505511871 0.0738538166946191 0.0710418273423667 0.0693981363338484 0.072038065651498 0.0718490552436308 0.0715265409856222 5 5 + 23473018 23473483 23473246.455 23471830 23473719 + gene protein_coding_gene TRUE TRUE AT5G57930.1|AT5G57930.2 APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) ACCUMULATION OF PHOTOSYSTEM ONE 2 Identical to APO protein 2, chloroplast precursor (Accumulation of photosystem I protein 2) (APO2) [Arabidopsis Thaliana] (GB:Q8W4A5;GB:Q94JR8;GB:Q9FJM2); similar to APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1) [Arabidopsis thaliana] (TAIR:AT1G64810.2); similar to H0525G02.2 [Oryza sativa (indica cultivar-group)] (GB:CAJ86305.1); similar to Os02g0732900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048031.1); similar to OSJNBa0008M17.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04336.2); contains InterPro domain Protein of unknown function DUF794, plant; (InterPro:IPR008512) -0.271998004665323 -3.31828703598079 0.00720909422754823 1 3.76642218692753 21.3070535320134 -0.271998004665323 0.0334891398256376 AT5G58610_at 2.80687450590758 2.57963753348373 2.64150872196849 3.09110256254637 2.77890005125793 2.32559670177836 2.86357028281514 2.66818275852645 2.47568771166471 3.20684423547564 2.69718994537633 2.96032765114229 2.72546397635759 2.96318071094675 2.82120543452285 2.63681767861567 3.02998335835758 3.29367571174745 2.90593082783231 0.204285993547467 0.201433700811026 0.209385834494724 0.203778754472229 0.205531681513493 0.218190542965732 0.206936610647274 0.206485625100219 0.2042834235072 0.206815733509119 0.215373632366840 0.200558143835746 0.208601711797762 0.201769054040729 0.205498007024504 0.201202634468761 0.204901280750600 0.199962721057767 0.202681201848227 5 5 - 23704009 23704892 23704380.455 23703997 23708279 - gene protein_coding_gene TRUE TRUE AT5G58610.1 PHD finger transcription factor, putative similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G05380.1); similar to GCN5-related N-acetyltransferase; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE78056.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) -0.362269459501111 -3.31720011856054 0.00722272784318688 1 3.76474623895768 5.5963223814726 -0.362269459501111 0.122053415942681 AT5G13710_at 9.58220159202624 9.70316708858015 10.1534323352333 10.1712946418002 10.9198067637783 10.7739168018871 9.08413475199964 8.97750040821065 10.0908887579007 9.436637393208 10.9464212269731 10.5215077139851 10.3720652894189 10.5710993559951 10.7037057923097 10.2072892361102 9.74627256936413 10.3833075733480 9.62896580423963 0.0840781270902862 0.0826601434223783 0.0837919764069315 0.0815938966966873 0.084800744653647 0.084975808232288 0.0853459267263254 0.0869965339990739 0.0944813240562618 0.0809890140591153 0.0834331510772742 0.083583345471588 0.0842294378296291 0.0875432755828822 0.0806274335686944 0.08392958736764 0.0867484555528095 0.0821173216306512 0.084729014338005 5 5|0 -|/ 4424055 4425031 4424483.1 4423698 4427061 - gene protein_coding_gene TRUE TRUE AT5G13710.1|AT5G13710.2 SMT1 (STEROL METHYLTRANSFERASE 1) SMT1 controls the level of cholesterol in plants Identical to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41) (24-sterol C- methyltransferase 1) (Sterol C-methyltransferase 1) (Protein STEROL METHYLTRANSFERASE 1) (Protein CEPHALOPOD) (SMT1) [Arabidopsis Thaliana] (GB:Q9LM02;GB:Q8LKW1); similar to SMT3 (S-adenosyl-methionine-sterol-C-methyltransferase 3), S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT1G76090.1); similar to S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase (GB:AAB04057.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216); contains InterPro domain Sterol methyltransferase C-terminal; (InterPro:IPR013705) 0.274213766535634 3.31705290412944 0.00722457643819227 1 3.76451923837856 19.9958264211749 0.274213766535634 0.0377586390672197 AT5G11860_at 6.82060733620617 7.11027918951842 8.43614992983636 8.15107088220721 8.53044628269532 8.29653285896764 6.8594671425026 6.56282382818592 6.53445920815713 6.5041624513968 7.50670069811238 7.40956255691731 7.4891075070852 7.65902488735511 7.28529239536542 7.59930039004865 7.99581485985644 7.85127360306875 6.30697910683847 0.195942575531079 0.196048234034979 0.212312018061935 0.213249374345440 0.200673693602130 0.203858987160096 0.199035744754875 0.202012178662568 0.203760148105336 0.201772570805927 0.201642959192813 0.191825030799167 0.198574251598724 0.198042593987529 0.193621823336082 0.191825030799167 0.217740267714654 0.197069889951971 0.207995653315967 5 5|0 -|/ 3822031 3823041 3822563.8 3821804 3824276 - gene protein_coding_gene TRUE TRUE AT5G11860.1|AT5G11860.2|AT5G11860.3|AT5G11860.4 NLI interacting factor (NIF) family protein|phosphoric monoester hydrolase similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT5G46410.1); similar to Os03g0850100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051903.1); similar to hypothetical protein DDBDRAFT_0219547 [Dictyostelium discoideum AX4] (GB:XP_635771.1); contains InterPro domain Dullard-like phosphatase domain; (InterPro:IPR011948); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 0.32761607361258 3.31266512748673 0.00727989739468018 1 3.75775268984554 14.6199437817768 0.32761607361258 0.0960246930707546 AT5G15420_at 1.82145856823732 2.27459143565215 2.43346517686022 2.10587650426255 1.53040315560328 2.06056339736217 2.12985758769509 2.43625781976486 2.35561207821211 2.55024453534166 2.09966680614097 2.14416176267455 2.49177779001953 1.96500533586899 2.69064965852441 1.99597797077453 2.75387218565569 2.31038380300091 2.65293740655316 0.219544898550334 0.218934616828367 0.229682148626783 0.236952048437239 0.224729260886554 0.221089006360888 0.221125724710857 0.225464940417071 0.230464757033434 0.229981538450339 0.239286096683149 0.216803156386677 0.223497683727535 0.22406265284 0.219866770558013 0.223161515022432 0.221451402980160 0.225135223138995 0.216803156386677 5 5 - 5007973 5008940 5008241.444 5007829 5008967 - gene protein_coding_gene TRUE TRUE AT5G15420.1 unknown protein -0.392562920961084 -3.30836602811748 0.0073345209485633 1 3.75112155379587 4.51207666607208 -0.392562920961084 0.143499231071471 AT5G38780_at 3.43458150057593 4.11487733572492 5.03137853957166 4.62212602447659 3.48438408431748 3.44474311338961 4.57849443174513 4.36556576141323 2.17989115004022 3.04601292640407 2.32500970091867 1.97498110816449 2.95061835762179 2.69344693632034 1.93997228890953 2.51550761082819 3.61922925304128 2.52128125669215 1.73783078504722 0.306990693420321 0.312317269959068 0.316234878004553 0.307110504647223 0.300220550307698 0.298316904171369 0.302998456375836 0.300415659255145 0.308443367412234 0.300267871920255 0.296289378516749 0.298504669318139 0.297455101895101 0.307327945719462 0.311840544410683 0.296289378516749 0.305662154078272 0.312841588705756 0.299307091186482 5 5|0 +|/ 15548060 15548661 15548465.2 15547245 15548752 + gene protein_coding_gene TRUE TRUE AT5G38780.1 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to methyltransferase-related [Arabidopsis thaliana] (TAIR:AT5G38100.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) -0.39067976939116 -3.30634245879759 0.00736037707078924 1 3.74799984830279 6.5788942328481 -0.39067976939116 0.142410432387455 AT5G40770_at 8.00741209580618 7.93205429779225 8.41084670838618 8.73561760231362 8.42745284048035 8.23477015900471 8.16406054418889 8.05261418971495 7.24988161796103 6.7056798403279 7.55300130197889 7.90721864116839 7.35489546615709 7.60779362435127 8.20459941998947 8.04109816120027 7.80051900085302 7.46814892992777 6.59678254646967 0.163725508807619 0.161301376033733 0.165209315353330 0.164715986853771 0.165055391349747 0.169170223626822 0.162837749361105 0.167918819209748 0.170997043820653 0.173114853422392 0.164042669669498 0.16574531367564 0.1669238209454 0.175465540128999 0.176210116203138 0.161301376033733 0.163452802462670 0.169323130843977 0.174183249229387 5 5 - 16332829 16333304 16333043.091 16332078 16333947 - gene protein_coding_gene TRUE TRUE AT5G40770.1 ATPHB3 (PROHIBITIN 3) prohibitin 3 similar to ATPHB4 (PROHIBITIN 4) [Arabidopsis thaliana] (TAIR:AT3G27280.1); similar to mitochondrial prohibitin 1 [Petunia x hybrida] (GB:AAW83328.1); similar to PHB1 [Nicotiana benthamiana] (GB:AAZ30376.1); contains InterPro domain Prohibitin; (InterPro:IPR000163); contains InterPro domain Band 7 protein; (InterPro:IPR001107) -0.296785418564012 -3.29468956965676 0.0075110976199498 1 3.73001764998340 15.5420738812723 -0.296785418564012 0.0693735195918675 AT5G55630_at 6.73407953620592 7.33978898905094 7.72836927253116 8.2928637832702 8.81906667664027 8.22816834258954 8.38342466011131 8.4614018765613 7.01525425834192 6.62407114905068 9.18017043381963 9.1532629357166 9.10865002751122 9.27184703939424 9.25114562682824 8.848450652296 8.6747049089197 8.87915479419685 6.92826559550309 0.212710490938642 0.205258835978278 0.203684289030217 0.205213249063656 0.192235427278793 0.200612133680053 0.194172549141098 0.192235427278793 0.211277719796374 0.211439283684559 0.192235427278793 0.192235427278793 0.192235427278793 0.196597811269381 0.201790529781418 0.194709713269169 0.215291020083525 0.195904896393420 0.208583987475257 5 5 + 22549437 22550078 22549667.273 22548584 22550344 + gene protein_coding_gene TRUE TRUE AT5G55630.1|AT5G55630.2 KCO1 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 1); calcium-activated potassium channel/ outward rectifier potassium channel Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Identical to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1) (KCO1) [Arabidopsis Thaliana] (GB:Q8LBL1;GB:O04718;GB:Q9FM75); similar to KCO5 (Ca2+ activated outward rectifying K+ channel 5), outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G01840.1); similar to Eucalyptus camaldulensis outward-rectifying potassium channel mRNA, complete cds (GB:AAF97727.1); similar to K+ channel protein [Solanum tuberosum] (GB:CAC34339.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain K+ channel, two pore; (InterPro:IPR003280); contains InterPro domain Ion transport 2, bacterial; (InterPro:IPR013099); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.442896116949835 3.29400226994080 0.00752008528513827 1 3.72895674587938 15.9492888771037 0.442896116949835 0.176547928867623 AT5G39850_at 3.73162409586733 4.70130057036116 4.64028475802166 5.32180346548951 6.44674319965255 5.55327328946401 3.99455299749401 4.37778399553386 2.82306447106774 3.31190262288768 4.85166622921493 5.08270214719993 4.87151256828769 4.6953579464815 4.95622980931483 4.43602589898681 5.06647904640947 3.80992227424803 3.36304356610188 0.265457574926617 0.254995732730864 0.257768642247671 0.261307284110442 0.255479068119569 0.269966466088975 0.254824529904601 0.265218071358115 0.259329411178894 0.259541394263878 0.256876572455436 0.257285479067304 0.258356324646343 0.265561327374595 0.254824529904601 0.254824529904601 0.269545269293378 0.264152868077939 0.257338491881741 5 5 + 15967650 15968299 15968019.818 15967250 15968653 + gene protein_coding_gene TRUE TRUE AT5G39850.1 40S ribosomal protein S9 (RPS9C) Identical to 40S ribosomal protein S9-2 (RPS9C) [Arabidopsis Thaliana] (GB:Q9FLF0); similar to 40S ribosomal protein S9 (RPS9B) [Arabidopsis thaliana] (TAIR:AT5G15200.1); similar to 40S ribosomal protein S9 [Catharanthus roseus] (GB:CAG47084.1); contains InterPro domain Ribosomal protein S4; (InterPro:IPR001912); contains InterPro domain Ribosomal protein S4/9, eukaryotic and archaeal form; (InterPro:IPR005710); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) 0.59558692940892 3.28360483501568 0.00765740016695095 1 3.71290350076428 8.78954106817067 0.59558692940892 0.265281832046684 AT5G03610_at 3.53627416605124 4.05056797856619 5.37656518915222 5.73259177013273 3.73334676554671 3.32879779744411 3.19936243987232 3.4073565102298 3.20235769308636 2.97208097638072 4.39612535180185 5.11161776539867 3.8968695622951 3.9285303689343 5.26044109689439 4.41531151970928 3.44999124466174 4.04359062555529 3.21233186092693 0.213956793008397 0.212495865648675 0.218875511109257 0.225052848681743 0.212495865648675 0.226219981258058 0.212495865648675 0.212495865648675 0.242440907292111 0.215734384906025 0.221238557799695 0.217011578190378 0.217352587362651 0.220145659758164 0.221568812133673 0.212931277606207 0.228916263008959 0.233734315764446 0.215841080274531 5 5 + 917567 918293 917979.364 915464 918484 + gene protein_coding_gene TRUE TRUE AT5G03610.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G09930.1); similar to GDSL-lipase -like [Oryza sativa (japonica cultivar-group)] (GB:BAD46208.1); similar to Os09g0567800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063965.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.375340248756822 3.28346850515688 0.0076592175554569 1 3.71269296392973 7.76647442814325 0.375340248756822 0.133843485706844 AT5G36250_at 6.73072813432327 6.70654279406859 7.92139897285015 7.60635361274763 8.53428492959735 8.36859993251236 6.92971714412172 7.27285140104814 6.80603788231031 6.60416969102012 8.35598444096915 8.07559118704424 8.32711956105009 8.24555240367425 7.61122421449698 8.35554921962024 7.85168085208004 7.61070983607727 6.52565534190079 0.232274939931617 0.215496432393814 0.212651238635761 0.214938901985413 0.214076819888425 0.212651238635761 0.219216745556424 0.223604122386161 0.235402980484345 0.237839671914327 0.212655406258543 0.215871383958373 0.218886070606074 0.225128224816979 0.226011072485352 0.212651238635761 0.215491530340057 0.234183112112799 0.232281287834544 5 5 + 14300909 14301572 14301227.818 14299333 14301811 + gene protein_coding_gene TRUE TRUE AT5G36250.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT3G02750.2); similar to protein phosphatase 2c [Medicago sativa] (GB:AAV73837.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.312268802645385 3.27903249452205 0.00771859450211967 1 3.7058416669773 14.8585416665521 0.312268802645385 0.0856631329415658 AT5G11950_at 8.28292980747284 8.52776955222833 9.19393818296063 9.08935994484516 8.96690751716532 8.6824496053764 8.3962735677157 7.98506420326725 7.63112021634104 7.71265851024829 8.28671632729289 8.24237643551148 8.07553762972882 8.09409190337953 7.78401891461912 8.4860054733912 7.49703954047972 7.39494491302659 7.3117458581233 0.194922225596104 0.18945365601895 0.198209493509038 0.191753824223362 0.187611202966377 0.194781920421667 0.187796804439914 0.191137448784608 0.204908272217153 0.197638893916848 0.192373348873042 0.188676533593943 0.194405293465626 0.196953731311275 0.199757489885716 0.189018611748454 0.197769884843678 0.217207840916978 0.189386089799649 5 5|0 +|/ 3855150 3856775 3856333.889 3854917 3856984 + gene protein_coding_gene TRUE TRUE AT5G11950.1|AT5G11950.2 Identical to Lysine decarboxylase-like protein At5g11950 [Arabidopsis Thaliana] (GB:Q84MC2;GB:Q570P8;GB:Q9LYH8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABE86251.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) -0.326393921578636 -3.27575304802714 0.00776279301161084 1 3.70077580850948 16.4078030078371 -0.326393921578636 0.0980309310923483 AT5G35270_at 2.28251750147427 2.77955305693570 3.20121490138956 3.38504766312845 2.62644435128267 3.15665409954443 2.74241844181601 2.62204336655345 2.97387420300547 3.43283649569767 2.76591437710305 3.05582403141681 2.58474567804799 2.74942863299574 2.94852532826385 2.6535958890637 2.88885716310277 3.0303016279813 3.291619107417 0.27422997800804 0.278607705864961 0.266852499537968 0.283682977968243 0.282921762212522 0.277103554042434 0.266852499537968 0.274710896057815 0.291729797011565 0.266852499537968 0.266852499537968 0.279168374300685 0.266852499537968 0.273107972255367 0.273072457418256 0.274297290864019 0.268654824571955 0.266852499537968 0.271737916330184 5 5|0 +|/ 13524717 13525578 13524925.333 13524678 13525611 + gene protein_coding_gene TRUE TRUE AT5G35270.1 cytochrome P-450 aromatase-related similar to cytochrome P-450 aromatase-related [Arabidopsis thaliana] (TAIR:AT4G07435.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340) -0.370434715801612 -3.27148758348975 0.00782066791037029 1 3.69418575629492 5.88319951928404 -0.370434715801612 0.131390705146179 AT5G46510_at 2.48948918477754 2.64814780464434 3.06888071282944 2.5751336519792 3.8454951082716 2.3726887365925 2.77896937176251 2.33886660553592 2.47071744156587 1.68103867663322 4.42932258741469 4.56163327305933 3.4056456484897 3.94015875381881 3.49300860829092 3.5509347549067 3.04177781832476 3.24945499112409 2.17671526246089 0.235369269179624 0.240734814410378 0.233009342494919 0.235883244447397 0.248221040600182 0.245101869012386 0.232532654954445 0.246285391590470 0.238934576284328 0.247365414063976 0.23274536618631 0.232532654954445 0.23463917246993 0.238609347286902 0.247583403303925 0.235287936392393 0.241219139546156 0.236811297654738 0.238091421130369 5 5 + 18881699 18882106 18881885.727 18877678 18884240 + gene protein_coding_gene TRUE TRUE AT5G46510.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46520.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.621489255646843 3.27139778817326 0.00782189100494859 1 3.6940470116042 5.67395015437344 0.621489255646843 0.280743939935032 AT5G52250_at 3.22849076749389 2.8324223568702 2.71018192739407 2.74602060713574 2.92576751970174 2.88379948601919 2.60876623204573 2.90252590488218 2.75937596754547 2.62339790730682 3.08406387812420 2.78466368022409 3.10691276084773 3.27354961069227 2.66900833819005 2.89497523734489 2.95123562698756 3.21045156672471 2.91159391880972 0.1947303578889 0.192684328899521 0.197229385863603 0.195998006806125 0.192488583973206 0.198073187702750 0.190643389821216 0.203829112012407 0.199675028692803 0.197759698171909 0.198643869107865 0.192506540612670 0.197640618024932 0.193862588237913 0.192866445988665 0.195038310085981 0.204830004395058 0.193947318000707 0.196024921579154 5 5 + 21234754 21235212 21234931.727 21234081 21235448 + gene protein_coding_gene TRUE TRUE AT5G52250.1 transducin family protein / WD-40 repeat family protein Encodes a transducin protein whose gene expression is induced by UV-B. This induction is reduced in hy5 mutant and may be a target of HY5 during UV-B response. similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G23730.1); similar to putative COP1 [Oryza sativa (japonica cultivar-group)] (GB:BAD07933.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.311696828535384 -3.27061934570897 0.00783250230316101 1 3.69284420118694 5.73557027616581 -0.311696828535384 0.085869064692105 AT5G02680_at 2.63852897477706 2.64674698472030 3.77116008823802 3.27449237054706 3.69197946758531 3.06193435260092 2.74098105016791 2.67303407761331 2.57281463773561 2.53603411183213 3.03116101949659 3.29374940404722 2.91399532218572 3.58133018108834 3.05771177377215 3.34906027362099 3.28750938236034 3.70121211441702 2.23013983666219 0.200479634367127 0.197070637350134 0.203890090998981 0.202096682766511 0.198806844312049 0.202337048333526 0.195973444970064 0.203357279646109 0.205984707898962 0.197792443517341 0.196095452763451 0.195451323893349 0.196199134730161 0.205755501375760 0.201430499277344 0.199819890483557 0.202877485672109 0.195451323893349 0.202359204797474 5 5|0 +|/ 605806 606723 606354 605710 606763 + gene protein_coding_gene TRUE TRUE AT5G02680.1 oxidoreductase similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT1G10310.1); similar to Aminoacyl-tRNA synthetase, class Ia; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] (GB:ABE91897.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.381811992491843 3.26980772772512 0.00784358150036863 1 3.69159008750092 5.92400502708966 0.381811992491843 0.139340709047763 AT5G66540_at 3.87003030764328 3.57172511218529 3.84223103337152 4.05989028875922 3.08232692732708 3.98520634927384 3.26128595514448 3.60867126058011 3.42965865444527 3.52974406484995 3.74458817535620 3.65552967323162 3.44775463327058 3.49869385897953 4.21605011550056 3.70162676047585 3.37639907806265 3.97591439864843 3.47475701693609 0.218280104704905 0.218807148246650 0.214102649076883 0.210450672356055 0.210911865795343 0.213315491838031 0.209751597424963 0.218210986384132 0.220326902211741 0.211161614063374 0.213933632698830 0.213866005324119 0.212380834344173 0.212040622228389 0.212940593224822 0.212338275353359 0.219925479602875 0.21313321250541 0.213912375477888 5 5|0 -|/ 26573914 26575135 26574574.444 26573559 26576653 - gene protein_coding_gene TRUE TRUE AT5G66540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to Os12g0133900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066092.1); similar to Os11g0137100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065694.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_798175.2); contains InterPro domain Mpp10 protein; (InterPro:IPR007151); contains InterPro domain U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p; (InterPro:IPR012173) -0.443882372532395 -3.26929889365026 0.0078505356368136 1 3.69080381421111 7.25023232033616 -0.443882372532395 0.179195521664985 AT5G48590_at 9.48367597496486 9.66844727377548 9.99155947626146 9.91740825906384 10.0772180741851 10.0006031422104 9.71040030823332 9.7554911859338 9.16544763732864 9.34324412885396 9.68805370124751 9.85191034060905 9.8247708834725 9.70046860160497 9.57105943765125 9.84997183051747 9.73900814360979 9.64289553338135 9.13586808726828 0.105506833822474 0.105506833822474 0.112839103432507 0.110717329570207 0.107301348954060 0.112504819221754 0.108136091253829 0.115445655358643 0.121756752543347 0.113264476755942 0.108958791487353 0.107450619949679 0.112843134100322 0.117419864373675 0.110001591351791 0.107759122558407 0.114904673115798 0.108257982151588 0.112261158024589 5 5 + 19716411 19716932 19716683.273 19715633 19717173 + gene protein_coding_gene TRUE TRUE AT5G48590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07310.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93505.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA93506.2); contains InterPro domain Protein of unknown function DUF760; (InterPro:IPR008479) -0.269968740439827 -3.26587732195021 0.00789746153562508 1 3.68551621135717 19.2997857585762 -0.269968740439827 0.0377330092726402 AT5G03260_at 1.59697984838722 2.41724756734157 1.83292777202998 1.67073351159015 1.82421740664430 2.08524618309636 1.75384910534107 2.07890712805354 1.99237896978534 1.85788078026882 3.29914354851647 3.75375917655751 2.75231246865301 3.1235998971978 4.04296537438186 3.24979560720144 2.37959815524456 3.62292107479681 1.85924655459140 0.247029123830640 0.247029123830640 0.253125910484694 0.257692898198826 0.250087461339349 0.249867632237298 0.248018637552111 0.247029123830640 0.258742725465848 0.256856447781457 0.255812488683280 0.258257276184673 0.255775251141759 0.255459026136345 0.281394424110939 0.252649746005266 0.257427903554112 0.264485489277977 0.24914254620813 5 5 - 777198 777850 777580 777020 779423 - gene protein_coding_gene TRUE TRUE AT5G03260.1 LAC11 (laccase 11); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC10 (laccase 10), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G01190.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to putative laccase [Oryza sativa (japonica cultivar-group)] (GB:BAB90733.1); similar to laccase [Pinus taeda] (GB:AAK37829.1); similar to laccase [Pinus taeda] (GB:AAK37830.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.415266540938618 3.26485095716927 0.00791159365882245 1 3.68392994788028 4.49810390582746 0.415266540938618 0.161687598772325 AT5G24080_at 2.85973148512949 2.87992141106571 3.06078922736982 3.26976352324466 2.71734084680953 2.85754386525835 2.78916472144558 2.67649420782051 3.00866390040035 3.16436902095590 3.22005157523497 2.75781974366495 2.81143863805338 3.11640970247070 3.21509537139891 2.81498879461738 3.38624485738765 3.20042055089325 2.70243907389116 0.184950803776521 0.183009368986018 0.191437580600945 0.182288493735041 0.184156509163408 0.187963491986981 0.183048581208820 0.183052040315304 0.18414998800739 0.188361907507588 0.185186342300670 0.182906737118025 0.187529934088842 0.184376605762101 0.180950548888721 0.183721218620032 0.195981217560577 0.179358032265218 0.184572498391845 5 5 - 8139338 8139950 8139599.091 8139256 8141125 - gene protein_coding_gene TRUE TRUE AT5G24080.1 protein kinase family protein similar to S-locus lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G19130.1); similar to Protein kinase; Curculin-like (mannose-binding) lectin; Apple-like [Medicago truncatula] (GB:ABE87106.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.276234285057440 -3.26446456247035 0.00791692066104972 1 3.68333275100858 5.90074332066676 -0.276234285057440 0.0478424697843772 AT5G07890_at 7.3778061190487 7.64354718797235 8.08032680521798 8.01281532620465 8.93518222001314 8.36222073452418 8.14916112813126 7.87671617908391 7.5728411874048 7.77611124929542 8.22999017335482 8.19199660289299 8.30051560254237 8.16830283614595 7.8238723167808 8.73069992073268 8.25655698025962 8.26815898597079 7.77932393375944 0.192811956406401 0.190752721960243 0.186998367683068 0.18842542142368 0.188463649949463 0.189108063988221 0.184138337482414 0.190032827718246 0.220497039025079 0.200440065004574 0.184723189393171 0.182882283821530 0.187432822590596 0.187509284163421 0.189851534511573 0.181879471086041 0.188126657317749 0.192410215450277 0.195022147328504 5 5|0 -|/ 2517727 2518524 2518105.7 2517382 2520039 - gene protein_coding_gene TRUE TRUE AT5G07890.1|AT5G07890.2|AT5G07890.3 myosin heavy chain-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61200.1); similar to Os07g0598700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060184.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83219.1); contains InterPro domain Spectrin repeat; (InterPro:IPR002017) -0.35306347886251 -3.26363241379056 0.00792840546807484 1 3.6820465812433 16.0325655296020 -0.35306347886251 0.119606594072323 AT5G14850_at 5.32576751383964 4.98412388844998 5.72632026356121 5.28375596121415 5.9782898356667 5.84868424950513 4.81716424681908 4.65827887950540 4.91947712065409 4.96619703587285 5.37781623434331 5.5508483138173 5.2821858001796 5.66647728082284 5.41245732320694 5.48666755810737 5.13528620304113 5.30044488019701 4.85325496898445 0.1844264558462 0.185276794294167 0.189459213295627 0.186446216296638 0.186914116584210 0.192430136508070 0.184007735572360 0.185803319089377 0.195478830808174 0.193605509147012 0.182608010457699 0.186284487855658 0.191429280575823 0.181427479201053 0.186454610722496 0.190431158554668 0.187094720017999 0.19956671483339 0.181427479201053 5 5 - 4802103 4802887 4802468.727 4801900 4804993 - gene protein_coding_gene TRUE TRUE AT5G14850.1|AT5G14850.2 mannosyltransferase, putative similar to sugar binding / transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G16900.1); similar to Os02g0111400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045653.1); similar to Phosphatidylinositol glycan anchor biosynthesis, class B [Homo sapiens] (GB:AAH17711.1); similar to Os01g0580100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043404.1); contains InterPro domain Alg9-like mannosyltransferase; (InterPro:IPR005599) -0.331357614453851 -3.26339366592136 0.0079317036620442 1 3.68167756411064 10.4850477670126 -0.331357614453851 0.103054843667859 AT5G10960_at 10.3361293124757 10.6487275016006 11.2027087522946 11.4144832374365 11.4053948156685 11.3394132280516 10.4180877271775 10.6742091131886 10.0932483077196 10.1757138111355 11.3169305523177 11.1687029536122 11.3225734829122 11.1016956867417 10.8842054889725 11.4065289907048 11.1660955916227 10.9734725170595 10.2945793338591 0.0965922781236644 0.0932601698643515 0.097880056297167 0.0953551163390622 0.0939808538881861 0.100149752300645 0.0978490672867905 0.0955982000659723 0.0996726707396025 0.100736720996864 0.099197127000014 0.0966623270625849 0.0970923683114818 0.0996222786041024 0.0994567125055704 0.0946153084986335 0.0982091338784226 0.0972257573330833 0.098751109375846 5 5 + 3464837 3465323 3465060.182 3464219 3465688 + gene protein_coding_gene TRUE TRUE AT5G10960.1 CCR4-NOT transcription complex protein, putative similar to CCR4-NOT transcription complex protein, putative [Arabidopsis thaliana] (TAIR:AT1G80780.2); similar to Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] (GB:ABE87519.1); contains InterPro domain Ribonuclease CAF1; (InterPro:IPR006941); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.304355093008958 3.26283572828291 0.00793941678616118 1 3.68081518175764 21.6075806154355 0.304355093008958 0.0797775983920369 AT5G14670_at 2.07087958612562 1.93137838392584 1.93588632879003 2.16043516382199 2.13303234579226 1.66152574510138 2.21214152620179 2.42551659093731 2.70501584278528 2.55562654048893 2.47153085050707 2.65611964203198 2.86184945766875 2.80410432396264 2.49559246034976 2.70861541413561 2.86684947726892 2.90449686886994 2.80889050388087 0.190244668768524 0.186081060817171 0.190341139456568 0.191374747403947 0.184528080557265 0.189005837527325 0.182160328828492 0.185468017598333 0.191450241023762 0.185119556129947 0.182080934348194 0.186628342317862 0.185433686045605 0.185975812733018 0.188486998644504 0.182080934348194 0.190275020261706 0.185240161605805 0.184720053836662 5 5|0 +|/ 4729338 4730451 4730015.222 4729322 4730498 + gene protein_coding_gene TRUE TRUE AT5G14670.1 ATARFA1B (ADP-ribosylation factor A1B); GTP binding / phospholipase activator/ protein binding A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. similar to ADP-ribosylation factor, putative [Arabidopsis thaliana] (TAIR:AT1G10630.1); similar to ARF1A1c (ADP-RIBOSYLATION FACTOR 1), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT2G47170.1); similar to ADP-ribosylation factor [Hyacinthus orientalis] (GB:AAT08648.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras GTPase; (InterPro:IPR001806) -0.328182288374367 -3.26252844143212 0.0079436680990979 1 3.68034021199458 4.77184401262087 -0.328182288374367 0.100569948850996 AT5G04070_at 3.54221749700286 3.71975564405408 4.79052705200225 4.73132996859906 4.73068958079253 4.43517043342676 3.99074807362895 3.28392177843212 2.95725999789697 2.68513881366153 3.90116434526893 3.56180752102177 3.83193067966767 4.07945072044685 3.86968859650352 4.03140644003087 4.39922367537122 4.00233254831786 2.9667291230552 0.223741925474366 0.226586228574351 0.235654909914076 0.225545536258889 0.233260446897548 0.237426891976590 0.227984257210992 0.228978058191366 0.249342848596652 0.225436863504539 0.223146476245649 0.221779519690055 0.226884275582617 0.224835373602485 0.227033293656372 0.222726624493794 0.226800352578724 0.230013559728858 0.233618899057330 5 5|0 +|/ 1102971 1104101 1103383.9 1102091 1104447 + gene protein_coding_gene TRUE TRUE AT5G04070.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G15940.1); similar to ALTE [Homo sapiens] (GB:AAQ89208.1); similar to Os09g0346600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062940.1); similar to DHRSX protein [Homo sapiens] (GB:AAH19696.2); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.376768451267596 3.26251825722838 0.00794380903735252 1 3.68032447028412 7.56771244217557 0.376768451267596 0.136478490210452 AT5G64390_at 4.96378124614536 5.38469525600076 5.68556061351432 6.19525603504009 6.13657019561872 5.92384921940716 4.14034231662031 4.23000753538040 4.53184330758472 4.10235648223728 5.06032759350645 5.77418019494532 5.6763916072375 5.76239649062719 5.43022850259326 5.82659502260066 5.63596465177797 5.3309183183582 4.17856676050291 0.241196739381642 0.232926637684617 0.253187704618178 0.229820739309468 0.234291988145346 0.231817325690637 0.231971788003713 0.240934487340059 0.241278123722533 0.240287788193931 0.225429097912131 0.225429097912131 0.230511370272649 0.235219630572579 0.234522205028584 0.232486352158019 0.248604981064391 0.232068539482218 0.225429097912131 5 5 + 25763189 25763930 25763484.4 25760570 25764774 + gene protein_coding_gene TRUE TRUE AT5G64390.1|AT5G64390.2 HEN4 (HUA ENHANCER 4); nucleic acid binding encodes a K homology (KH) domain-containing, putative RNA binding protein that interacts with HUA1, a CCCH zinc finger RNA binding protein in the nucleus. HEN4 acts redundantly with HUA1 and HUA2 in the specification of floral organ identity in the third whorl. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09560.1); similar to KH, type 1 [Medicago truncatula] (GB:ABD28546.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.355012015466396 3.26188600282648 0.00795256375265027 1 3.67934718249048 10.2490315427896 0.355012015466396 0.121168927506217 AT5G24890_at 7.77294905438451 7.92561730572193 8.9686475544137 9.04972511040458 9.69989988303327 9.14738612485136 8.39395259188841 7.9823580584912 7.38441882243669 7.70362211357046 9.0750778097973 8.4926559217454 8.73524026251157 9.01855907582536 8.5936178853075 9.04837741007921 9.20383787208296 8.44618418341198 7.726436150575 0.131305908809010 0.133793044332816 0.129206519742179 0.12634586941277 0.136310617973591 0.142427107320145 0.12634586941277 0.137671762965355 0.14134357982622 0.140732489572026 0.128034095392159 0.128719111972520 0.132063180202318 0.129954869337211 0.132434874762925 0.129320306681446 0.137820731730794 0.128689337938131 0.138073632275775 5 5 - 8558391 8559022 8558808.182 8558194 8559409 - gene protein_coding_gene TRUE TRUE AT5G24890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31510.1); similar to putative KID-containing protein [Brassica napus] (GB:AAO53442.1) 0.357371084692407 3.26132711779515 0.0079603107439955 1 3.67848328187883 16.8333267094599 0.357371084692407 0.122925184695796 AT5G38100_at -0.336264543191233 0.08823027480554 0.627305190181426 0.101374332496895 0.099286427500189 0.389864103422642 -0.166286462154294 0.809190552773998 -0.605563549104941 -0.227132363501326 0.771993862544014 0.518607399711927 -0.104962332256119 1.50639009853168 -0.126564481280407 1.48680646888406 -0.563125986915171 0.241258938117574 -0.42804821365962 0.414954660986435 0.414954660986435 0.414954660986435 0.414954660986435 0.429434279444748 0.455351888084023 0.42954137399578 0.450999107602172 0.414954660986435 0.414954660986435 0.422029170717484 0.414954660986435 0.453364424957944 0.45188297935532 0.447306450148175 0.421475015148054 0.414954660986435 0.480385376147216 0.414954660986435 5 5 - 15217068 15217149 15217103.667 15216719 15218415 - gene protein_coding_gene TRUE TRUE AT5G38100.1 methyltransferase-related similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G38780.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.496540529456485 3.26025104159942 0.00797524851014207 1 3.67681987315871 0.224613711393678 0.496540529456485 0.211437810773255 AT5G39640_at 2.37555015495029 2.6053246356288 3.09582338878842 3.1732945648197 2.48917222770799 3.01194787042815 2.94192198224592 3.26896943115408 2.57156830239681 2.75133608454431 2.43620292366203 3.07303012960585 2.89986056204099 2.72160286550817 2.86424486605523 2.35555843304459 3.10786568591567 3.16993012616878 3.3417890180074 0.204020610564058 0.203505407011987 0.206388330518924 0.204346968241458 0.203197600212021 0.204130983657306 0.202811299587246 0.214912741792590 0.207276369347215 0.216275340174252 0.203949359984019 0.210552274909907 0.203164951273231 0.212599869169212 0.203913642338917 0.202539409677522 0.205762260667361 0.20717760734916 0.203401359903074 5 5 - 15890267 15890434 15890338 15890267 15890497 - gene protein_coding_gene TRUE TRUE AT5G39640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20480.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) -0.345800159589213 -3.25795475746982 0.00800722067706465 1 3.67327000941788 5.72863457395692 -0.345800159589213 0.114667814702200 AT5G46180_at 7.64322903329014 8.07126916711078 9.48212912729059 9.46714394657343 9.50222573769208 9.260871959025 7.53126779284948 7.46761473382866 6.6326500546479 7.20640996465563 7.65361229911049 6.82567247915417 7.71264190363538 7.48678030904374 6.38715541226071 8.00112682073517 8.24173953474662 7.7010387540941 6.40980481955069 0.206926609404206 0.208527034879685 0.213966785031490 0.221025143452701 0.218748262829474 0.211593069106855 0.219262773042313 0.210138947361913 0.224824377723764 0.216604562685175 0.219125212642423 0.207360984083505 0.209354751896784 0.226883252154376 0.227345278518726 0.205201884621454 0.214259309165541 0.216599457501603 0.213196813306673 5 0|5 /|- 18736068 18736594 18736285.556 18735702 18738602 - gene protein_coding_gene TRUE TRUE AT5G46180.1 delta-OAT (ornithine- delta-aminotransferase); ornithine-oxo-acid transaminase ornithine delta-aminotransferase similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to ornithine aminotransferase [Glycine max] (GB:ABA86965.1); similar to ornithine aminotransferase [Vitis vinifera] (GB:AAG09278.1); similar to ornithine aminotransferase [Medicago truncatula] (GB:CAC82185.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814); contains InterPro domain Ornithine aminotransferase; (InterPro:IPR010164) 0.310280712177439 3.25670284912208 0.00802470667080936 1 3.67133452290649 15.678640213232 0.310280712177439 0.0857880459105502 AT5G35580_at 3.04984345983272 3.04104682630458 4.31368193995502 4.96145113384324 2.61721242600987 3.25892205070215 1.88747862667873 1.92091837195873 2.6227228822489 1.88484540077020 2.23820631028085 1.76693307365660 2.16143542604797 2.11802418619865 2.30078234889138 1.97892451006093 2.56460345784506 2.81456668703730 1.79402335835831 0.288430545338094 0.277971923667201 0.279079232487810 0.297115819724120 0.285974610632389 0.285707687960311 0.290773655023594 0.287387409382106 0.283222213952176 0.276979202079421 0.276979202079421 0.276979202079421 0.281299673625682 0.285297645760188 0.279105127158217 0.282617168660431 0.290060977166457 0.276979202079421 0.277970984478624 5 5 + 13780342 13780951 13780629.9 13779195 13781174 + gene protein_coding_gene TRUE TRUE AT5G35580.1 kinase similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G05940.1); similar to Avr9/Cf-9 induced kinase 1 [Nicotiana tabacum] (GB:AAP03880.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.407809081095089 3.25247274819217 0.00808407960522167 1 3.66479393521588 5.3030518779747 0.407809081095089 0.157906266165643 AT5G13110_at 6.31791235449457 6.02982472001197 6.67203627734984 6.57830874754807 7.0348026457339 5.80074563934506 6.22673490578301 6.0429761483072 5.32358770828642 6.21902667719008 6.36724668736273 7.09882886681347 6.4234760896825 6.53830069416174 6.09136593589338 6.63103909413111 6.59156144039636 6.70799192156508 6.04349766123519 0.208275552479941 0.200631515158398 0.202228506772627 0.200766046473488 0.211604223333317 0.212983509571318 0.209537072893477 0.200631515158398 0.217709924342121 0.200787601454015 0.200631515158398 0.208547276230718 0.20656254181603 0.219739318354399 0.204307282518098 0.200631515158398 0.214402624380014 0.213216292718499 0.200631515158398 5 5 + 4161019 4161578 4161304.545 4158814 4161823 + gene protein_coding_gene TRUE TRUE AT5G13110.1 G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2); glucose-6-phosphate 1-dehydrogenase Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. Identical to Glucose-6-phosphate 1-dehydrogenase 2, chloroplast precursor (EC 1.1.1.49) (G6PD2) (G6PDH2) [Arabidopsis Thaliana] (GB:Q9FY99;GB:Q43728;GB:Q8VZD6); similar to G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3), glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G24280.1); similar to G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1), glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana] (TAIR:AT5G35790.1); similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD) (GB:Q43793); similar to plastidic glucose 6-phosphate dehydrogenase [Nicotiana tabacum] (GB:AAF87216.1); similar to glucose-6-phosphate 1-dehydrogenase [Solanum tuberosum] (GB:CAB52708.1); contains InterPro domain Glucose-6-phosphate dehydrogenase; (InterPro:IPR001282) -0.513162194518972 -3.24825701619356 0.00814369734395345 1 3.65827445420025 12.5470495248990 -0.513162194518972 0.222187854992310 AT5G09300_at 3.57429022799725 3.77260408824536 4.46165893636532 4.50611880166229 4.33128339916402 4.41903435286574 2.95532702188693 3.10397429287244 3.41342867049478 3.18463658889216 4.05230165664541 3.94011608908086 4.18031965180794 4.11041717081642 4.44950804307499 4.60396628937898 3.80292975364972 3.8942918184275 3.23712617295033 0.207664364755395 0.211290228258943 0.207045902102475 0.214535090735531 0.211950432212073 0.208023263549113 0.205912817352621 0.216019851788036 0.208168970732792 0.205639019074569 0.205130386813301 0.205130386813301 0.208968294971694 0.214914850721885 0.217922043607354 0.207951901566379 0.215363096520292 0.206420235443482 0.218324667895390 5 5|0 -|/ 2884285 2885073 2884553.444 2884180 2886864 - gene protein_coding_gene TRUE TRUE AT5G09300.1|AT5G09300.2 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative similar to 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative [Arabidopsis thaliana] (TAIR:AT1G21400.1); similar to Os12g0183100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066324.1); similar to 2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95968.2); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) 0.273541077865982 3.2463403823383 0.00817095015532805 1 3.65531008411633 7.59435061674374 0.273541077865982 0.0461447292976726 AT5G10180_at 9.54191617749973 9.80135430167515 11.1151790296879 11.1450826901514 11.0919658572758 10.1865802594922 10.9005496161582 10.7478239847608 9.35665861202411 10.3368203714686 11.6433248143342 11.235647456461 11.2882782956282 11.6457820838094 10.8031795902555 11.1852528961129 11.2375630316988 11.6983845716603 10.052187212653 0.113528816776295 0.109295758209026 0.116969481239248 0.109756997515764 0.110219276250612 0.122681979781947 0.110402664533613 0.109977588716637 0.125810491016341 0.111023229094788 0.110639490757121 0.109295758209026 0.109295758209026 0.111435659644185 0.112664871396209 0.109295758209026 0.116146859600866 0.114128698921039 0.113421408716238 5 5|0 +|/ 3195629 3196774 3196056.111 3193145 3197121 + gene protein_coding_gene TRUE TRUE AT5G10180.1 AST68 (Sulfate transporter 2.1) Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. Identical to Sulfate transporter 2.1 (AST68) (SULTR2;1) [Arabidopsis Thaliana] (GB:O04722); similar to SULTR1,2 (SULFATE TRANSPORTER 1,2) [Arabidopsis thaliana] (TAIR:AT1G78000.2); similar to SULTR1,1 (sulfate transporter 1,1), sulfate transporter [Arabidopsis thaliana] (TAIR:AT4G08620.1); similar to AST56 (sulphate transporter 2,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT1G77990.1); similar to plasma membrane sulphate transporter [Brassica oleracea var. acephala] (GB:CAG17931.1); similar to 80A08_15 [Brassica rapa subsp. pekinensis] (GB:AAZ67600.1); similar to 4D11_19 [Brassica rapa subsp. pekinensis] (GB:AAZ67533.1); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) 0.418406238065903 3.24631186266620 0.00817135638193786 1 3.65526597233571 21.1950058185261 0.418406238065903 0.165197022016842 AT5G53540_at 7.20735124326253 7.36105123540949 8.20024296117264 8.28473735232258 8.07773069439559 7.76478885699484 7.4142841284071 7.23346361545931 7.0304220591152 7.20376820804958 7.75396590016476 7.8448183580231 7.43284560600564 7.54941102920117 7.84238608353845 7.8209724979654 7.47038766965995 7.67414638720847 7.01021630175587 0.131978862590554 0.137885335490280 0.136957147507457 0.141458260529834 0.138171187487123 0.143297791039556 0.140790042273527 0.131256967249826 0.149369002726305 0.144282439991690 0.131611292029966 0.136187506978817 0.135055889173215 0.132548456140868 0.135391913816516 0.132018380595907 0.141437283351488 0.138298507824076 0.136883982804373 5 5|0 -|/ 21766801 21767398 21767013.1 21766512 21768463 - gene protein_coding_gene TRUE TRUE AT5G53540.1 MSP1 protein, putative / intramitochondrial sorting protein, putative similar to MSP1 protein, putative / intramitochondrial sorting protein, putative [Arabidopsis thaliana] (TAIR:AT4G27680.1); similar to Os06g0714500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058575.1); similar to AAA+-type ATPase (ISS) [Ostreococcus tauri] (GB:CAL52837.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.292558333330343 -3.24620186515618 0.00817292335034003 1 3.65509583716192 15.0704990348169 -0.292558333330343 0.0695222512722375 AT5G02440_at 1.39618744278434 1.82686352591536 1.88169930668087 2.45598554340671 2.14218738927147 1.79204284335847 1.95264221521219 2.29502247322128 2.20272447484663 2.18906574745047 3.26261263577370 3.49119980507091 3.07996186858823 3.80599321055517 2.96814966594109 3.91897655723145 2.96206593036697 4.10855277860622 2.61993587467909 0.271825527839770 0.268007009924165 0.279564904748977 0.270639201539069 0.277392582561064 0.272294564010039 0.288799409363405 0.268338214041581 0.267061354455708 0.265151269491261 0.273957293620645 0.26850346223404 0.269745203966932 0.278804312354142 0.274811928840708 0.273042964437162 0.268856212665856 0.28082137152796 0.268433049110142 5 5|0 +|/ 531194 532679 532177.2 531064 532929 + gene protein_coding_gene TRUE TRUE AT5G02440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17950.1) 0.395096259801846 3.24285034156084 0.00822081484080927 1 3.64991161891723 4.86129438690239 0.395096259801846 0.150379625217896 AT5G15870_at 5.86698865625232 5.91399720867849 7.07718426409621 7.03042756319586 5.96718458002984 5.47221500540851 4.23852611091108 3.60778489935039 5.56178325283083 4.69096171933928 4.42554283122504 5.46948584674091 4.08087021905883 4.4489887403198 4.61756798998833 4.57049266033976 4.96939575922114 4.96737892227726 4.79081795972604 0.302612694923717 0.291587271877675 0.307427498793577 0.298156486022556 0.288651750892809 0.290915066616567 0.292547522399126 0.28867809253565 0.296593430747087 0.291725569715290 0.291005152728263 0.288651750892809 0.294188862543104 0.289095487245536 0.291669143584442 0.288651750892809 0.290003962375791 0.290321769074051 0.290542003335111 5 5 - 5182646 5183216 5183032.182 5182644 5184881 - gene protein_coding_gene TRUE TRUE AT5G15870.1 glycosyl hydrolase family 81 protein similar to glycosyl hydrolase family 81 protein [Arabidopsis thaliana] (TAIR:AT1G18310.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96863.1); similar to beta-glucan-binding protein 4 [Medicago truncatula] (GB:ABB69784.1); similar to putative beta-glucan elicitor receptor [Brassica napus] (GB:AAP42646.1); contains InterPro domain Glycoside hydrolase, family 81; (InterPro:IPR005200) -0.378414163655504 -3.24218276520709 0.00823038832383734 1 3.64887891376782 10.5009067102129 -0.378414163655504 0.139223025436453 AT5G46640_at 1.44301546466913 1.23911972779472 2.13750800725322 2.09443170847430 1.69725106132672 1.70680428860986 2.04081060392254 1.65370733062644 1.59365044789051 1.72034132740692 2.28897777453394 2.12377086840709 2.61024295283383 2.43470572943970 2.26904902957417 2.28210596579165 2.20847325617211 1.95096084825948 1.75894477181554 0.205359364550273 0.197966999022276 0.196102547089754 0.209587542650899 0.193975814721539 0.200392420304909 0.193053195039486 0.196876713751496 0.205899650412834 0.201997263950689 0.194102454070394 0.198942149440794 0.193053195039486 0.199228259898675 0.196810581753419 0.195163931428320 0.197045837585632 0.217250657470167 0.198835839757990 5 5 + 18942769 18943459 18943143.091 18941712 18943802 + gene protein_coding_gene TRUE TRUE AT5G46640.1 DNA-binding family protein similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G17950.1); similar to putative AT-Hook DNA-binding protein [Oryza sativa] (GB:AAK00433.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 0.298455872366845 3.24021369712461 0.00825869241030786 1 3.64583271261582 3.73258835016669 0.298455872366845 0.0760986603458705 AT5G40630_at 2.82097958769257 3.04034456554384 2.72901619521372 2.95018712210479 3.24584829413605 3.10016026243893 2.50596843600104 2.84223308283704 2.17126012567249 2.38888428738584 3.45690219258302 4.01328004943153 3.97876794232512 3.83549961027901 3.52236498993024 3.9393546471049 3.69817567687968 3.67789972293757 2.88345087376368 0.223416229122438 0.219294599802835 0.229303627502076 0.222617494045098 0.221831072690667 0.224941257855841 0.219294599802835 0.225124819268128 0.229017532621909 0.221150266441364 0.229686942372448 0.230587245825975 0.226898251280902 0.225754610210959 0.223927982334746 0.223063239697858 0.235922464727902 0.229572581635952 0.232109002200833 5 5|0 -|/ 16288630 16289613 16289240.4 16288368 16289698 - gene protein_coding_gene TRUE TRUE AT5G40630.1 ubiquitin family protein similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT5G14360.1); similar to Os04g0483000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053121.1); similar to H0525D09.13 [Oryza sativa (indica cultivar-group)] (GB:CAH66973.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.305855891023099 3.23950304267783 0.00826893199945066 1 3.64473325353931 6.02758170968327 0.305855891023099 0.0832348836464058 AT5G07360_at 6.88232749651731 7.17434196987592 8.23899836702632 8.39982197063153 7.78804814184919 7.97018296152904 4.27751907385905 4.98678525349058 5.48074130334886 4.52662853544959 5.17819757453168 5.10284144965345 5.676429907908 5.98924935521638 5.08185416500789 5.86804868545681 6.2120072019764 5.62033252372698 5.07841068731457 0.229122521129988 0.227036881011151 0.231113644441430 0.230434473050653 0.230889610245398 0.231626594928198 0.237809865254166 0.229693097963838 0.240107488136099 0.231217819662467 0.227036881011151 0.227036881011151 0.235243473102417 0.227036881011151 0.234785122601460 0.227036881011151 0.241006091996346 0.233601425310903 0.232196111316559 5 5 - 2326962 2327495 2327186.364 2326705 2330143 - gene protein_coding_gene TRUE TRUE AT5G07360.1|AT5G07360.2 amidase family protein similar to glutamyl-tRNA(Gln) amidotransferase, putative [Arabidopsis thaliana] (TAIR:AT3G25660.1); similar to amidase-like protein [Nicotiana tabacum] (GB:BAC53930.1); similar to Amidase [Medicago truncatula] (GB:ABE85659.1); similar to amidase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94086.2); contains InterPro domain Amidase; (InterPro:IPR000120) 0.377464081339531 3.23385055563452 0.00835083976373241 1 3.63598716701833 12.2746099626669 0.377464081339531 0.139238398470543 AT5G45800_at 9.60275292595063 9.85521562480484 11.2767732920583 11.5451479812035 10.3529539136564 10.2780446241241 9.46457145639613 9.64228182532242 8.74649794773928 8.73887221788068 8.94233222190293 9.48332199403839 9.35574788486072 9.4131717333656 9.59811466972031 10.0576915136889 9.72447003663892 9.6733631825129 8.8415484337892 0.0830041127130807 0.0819027750849399 0.086605788222356 0.0824434432492447 0.082120975242485 0.091827119571901 0.0816520449771288 0.0816520449771288 0.0963885787174563 0.0972119827357427 0.0860636533193421 0.0816520449771288 0.0894148681435105 0.0866091316185826 0.0817848308786216 0.0831594940246172 0.0926302373441201 0.0867251234465546 0.0935630558429525 5 5 - 18593019 18593552 18593293.455 18592763 18596334 - gene protein_coding_gene TRUE TRUE AT5G45800.1 MEE62 (maternal effect embryo arrest 62); ATP binding / protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G24230.1); similar to Protein kinase; Ribosomal protein S2 [Medicago truncatula] (GB:ABE80251.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.293739483235448 3.23335460434452 0.00835806578676686 1 3.63521969122819 19.4055507993033 0.293739483235448 0.0719696803409922 AT5G49080_at 1.80071015312426 1.66046837212335 1.59257962233774 2.08809658823547 1.45098364250103 2.09757164219533 1.86387274684695 2.07495900097573 2.94116781423185 3.19756491850181 2.75809685570087 2.83476980626964 2.91397295014193 2.69669055055604 2.69708515138861 2.56212382152925 2.89922123070454 2.37053502391133 2.79065809436507 0.231527397010993 0.225505934297043 0.240055071434558 0.224252888864411 0.229436414595381 0.230080850321706 0.232802280596197 0.241813390024085 0.250425720916078 0.228088324249015 0.235027479120209 0.225618401527698 0.224659244476898 0.229163740847432 0.231223753905748 0.225428123820884 0.248849058841448 0.233570552629334 0.246970832165818 5 5 - 19908206 19908242 19908227.625 19908010 19910035 - gene protein_coding_gene TRUE TRUE AT5G49080.1 proline-rich extensin-like family protein similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT5G06640.1); similar to ATHRGP1 (ATHRGP1), structural constituent of cell wall [Arabidopsis thaliana] (TAIR:AT3G54590.1); similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT4G08410.1); similar to Extensin-like re (GB:ABD65126.1); similar to extensin, putative [Brassica oleracea] (GB:ABD65124.1); similar to hydroxyproline-rich glycoprotein precursor (GB:AAA87902.1); contains InterPro domain Extensin-like region; (InterPro:IPR006706) -0.389795037618103 -3.23314338280575 0.00836114522757137 1 3.63489282522895 4.67516798744657 -0.389795037618103 0.147638883146306 AT5G08130_at 7.32352167969453 7.67395117192575 7.11061289311707 7.3796708196075 8.49251863176373 7.97301345355177 7.15240680007525 7.13586782109819 7.98734404270546 6.89341486460097 8.4580630930266 8.57747605672826 8.41052572052648 7.88201558419 8.67508261751682 8.34118511283054 7.43219805161765 7.95001472284533 7.34037431530006 0.186049790120319 0.182669895320122 0.190220396510000 0.185922927908524 0.182465088628153 0.182105571029890 0.193283997940314 0.181365986193888 0.185468459691521 0.196764381105658 0.176837705331371 0.178017533569928 0.177187755592701 0.191943311924741 0.182548681472870 0.176298479042609 0.198806279638802 0.180890805547735 0.178632973421453 5 5 - 2606656 2607532 2607094.364 2606201 2609607 - gene protein_coding_gene TRUE TRUE AT5G08130.1 BIM1 (BES1-interacting Myc-like protein 1); DNA binding / transcription factor Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Identical to Transcription factor BIM1 (BES1-interacting Myc-like protein 1) (Transcription factor EN 126) (Basic helix-loop-helix protein 46) (bHLH 46) (AtbHLH046) (BIM1) [Arabidopsis Thaliana] (GB:Q9LEZ3); similar to BIM2 (BES1-INTERACTING MYC-LIKE PROTEIN 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69010.1); similar to Os08g0490000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062109.1); similar to Putative bHLH family protein [Brassica oleracea] (GB:AAV25873.1); similar to Os09g0475400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063459.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.347512392507698 -3.23165884114755 0.00838282135292071 1 3.63259541782176 15.3416276725771 -0.347512392507698 0.118052225110343 AT5G04230_at 5.68165462002304 5.9075508043795 4.66279217531137 5.49336775657803 6.7269830628286 6.57246584530219 6.04363776349735 6.07319385958014 3.71997847442711 4.76906751353606 5.37369370341703 5.85474449793002 5.4359157530888 5.63084254845924 5.06694972147065 6.04516514124231 5.88769281104847 4.99336698388482 4.45416592995162 0.234471934646022 0.228512696496244 0.228610623278199 0.230577911471661 0.227689737889872 0.23623664654591 0.226692780040587 0.232915035906314 0.245540065618686 0.225957320552160 0.225957320552160 0.225957320552160 0.22934075963305 0.229917884488386 0.227698826296341 0.22690040198632 0.231229990420756 0.235357810142601 0.226430778724135 5 5 + 1163140 1163678 1163359.182 1160832 1163776 + gene protein_coding_gene TRUE TRUE AT5G04230.1 PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase Member of Phenylalanine ammonialyase (PAL) gene family.Differs significantly from PAL1 and PAL2 and other sequenced plant PAL genes Identical to Phenylalanine ammonia-lyase 3 (EC 4.3.1.5) (PAL3) [Arabidopsis Thaliana] (GB:P45725;GB:Q53YP2;GB:Q9FYD8); similar to PAL2 (phenylalanine ammonia-lyase 2), phenylalanine ammonia-lyase [Arabidopsis thaliana] (TAIR:AT3G53260.1); similar to PAL1 (PHE AMMONIA LYASE 1), phenylalanine ammonia-lyase [Arabidopsis thaliana] (TAIR:AT2G37040.1); similar to phenylalanine ammonia-lyase, putative [Arabidopsis thaliana] (TAIR:AT3G10340.1); similar to phenylalanine ammonia lyase [Populus balsamifera subsp. trichocarpa x Populus deltoides] (GB:AAQ74878.1); similar to phenylalanine ammonia-lyase 1 [Manihot esculenta] (GB:AAK62030.1); similar to phenylalanine ammonia lyase [Jatropha curcas] (GB:ABI33979.1); contains InterPro domain Phenylalanine ammonia-lyase; (InterPro:IPR005922); contains InterPro domain L-Aspartase-like; (InterPro:IPR008948); contains InterPro domain Phenylalanine/histidine ammonia-lyase; (InterPro:IPR001106) -0.395295458368641 -3.23154444220977 0.00838449409579126 1 3.63241837395917 10.8204309197905 -0.395295458368641 0.151423722372959 AT5G56950_at 3.94109336353856 3.77774916153437 4.59029070302834 4.56585910526674 4.57894908610104 4.33746045901266 4.01278777738371 4.06688250108611 3.70329947740464 3.65157685120500 5.48844093234182 5.85346794364998 5.51712338913461 5.36281111067486 6.13617406415678 5.23402630686266 4.65217389533864 4.79695750972725 3.87299247393545 0.245480819763266 0.241454324462016 0.243160476381109 0.239118708159125 0.245816730750141 0.244610602806233 0.252890199590057 0.244981670891185 0.253630492121841 0.251691849224597 0.242127996577231 0.252062787844908 0.246276771615765 0.244393099519311 0.250673654637946 0.242172743122129 0.253541743276264 0.239827438230901 0.252889299202902 5 5|0 +|/ 23051118 23052496 23051774.625 23049675 23052887 + gene protein_coding_gene TRUE TRUE AT5G56950.1 NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN1;3); DNA binding similar to NAP1,1 (NUCLEOSOME ASSEMBLY PROTEIN1,1), DNA binding [Arabidopsis thaliana] (TAIR:AT4G26110.1); similar to nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 (GB:AAA50234.1); contains InterPro domain Nucleosome assembly protein (NAP); (InterPro:IPR002164) 0.275827542595796 3.22893686943882 0.00842271457897428 1 3.62838268395097 8.7952689337027 0.275827542595796 0.0514881184614009 AT5G13620_at 1.62702093696921 1.65102737798088 1.61962298775290 1.95233485232496 1.38362541897711 1.42148669675964 1.65106636775000 1.97221620403152 1.8243028142253 2.10611782997284 1.97632055419462 1.63981215390291 1.73325059866056 1.63704272000532 1.8404252168737 1.67858354975681 2.05743084990739 1.81160192727586 2.05539723415924 0.234401581417206 0.245060005622930 0.237661139434710 0.238954335448632 0.244137253340564 0.239351952626747 0.243028943473782 0.239477087970656 0.242577262675263 0.253236529398816 0.246786015901762 0.252004308129052 0.254090682120501 0.239080012109286 0.247763476862275 0.240752059368735 0.24535042596894 0.234748781771547 0.252350438054273 5 5|0 -|/ 4385397 4386006 4385690.1 4385388 4386376 - gene protein_coding_gene TRUE TRUE AT5G13620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49290.1); similar to Immunoglobulin/major histocompatibility complex [Medicago truncatula] (GB:ABE88482.1) -0.301740205421544 -3.22782503777168 0.0084390652714705 1 3.62666180229416 3.55584064153891 -0.301740205421544 0.0803995257902873 AT5G51070_at 10.0719881674632 10.0669746706215 11.4488865742451 11.4232242096063 11.1060799471409 10.8579507933725 10.0127697881702 10.1327842397438 9.39413482086244 9.87015305052228 10.5762104715410 9.83457406813753 10.5321715537500 10.4647289693594 9.51389470752422 10.7457111486571 10.3403870006649 10.1268862906020 9.4671326625104 0.109516255795509 0.104781965596595 0.106194431334331 0.104925838486133 0.104781965596595 0.113240394741537 0.112160017951506 0.105942915147723 0.129954156891391 0.107502059856798 0.106749247926359 0.104781965596595 0.104781965596595 0.110586792951215 0.110119515765497 0.106707502582040 0.111664918480160 0.111134414723044 0.107839723057252 5 5 + 20784830 20785657 20785329.636 20781541 20785907 + gene protein_coding_gene TRUE TRUE AT5G51070.1 ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase ATP-dependent Clp protease regulatory subunit Identical to ERD1 protein, chloroplast precursor (ERD1) [Arabidopsis Thaliana] (GB:P42762); similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to ATCLPC (CASEINOLYTIC PROTEASE C), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G48870.1); similar to ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa (indica cultivar-group)] (GB:AAN78327.1); similar to H0502B11.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66527.1); similar to ATP-dependent Clp protease regulatory subunit [Thermosynechococcus elongatus BP-1] (GB:NP_681098.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Clp, N terminal; (InterPro:IPR004176); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.273108692478347 3.22695108325447 0.00845194045703054 1 3.62530905377921 20.5620626509177 0.273108692478347 0.0479130949645149 AT5G50750_at 2.99128717635615 2.49159350701317 2.79709801699923 2.81286218742346 2.37391573457450 2.23201959157608 2.52025850462158 2.20926154173238 2.5555820596921 2.57697406776555 2.45747127890178 2.42901583938490 2.74430096933934 2.56568768300817 2.9403544752317 2.34014763421869 2.95789747925553 2.54762391405813 2.88457929862596 0.181709701469191 0.184531245304572 0.192665824491606 0.1893421088489 0.182683497537861 0.189364293764271 0.179073079224682 0.184223328182047 0.189401455517432 0.185460107941353 0.179073079224682 0.182374481173142 0.18089981037024 0.181845786421977 0.179133376216428 0.185977622795552 0.196298168509338 0.184951698179091 0.187922104518637 5 5|0 +|/ 20658880 20659627 20659371.7 20658218 20659886 + gene protein_coding_gene TRUE TRUE AT5G50750.1 RGP4 (RGP4); alpha-1,4-glucan-protein synthase (UDP-forming) reversibly glycosylated polypeptide RGP-4 (RGP4) similar to RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) [Arabidopsis thaliana] (TAIR:AT3G02230.1); similar to RGP2 (Reversibly glycosylated polypeptide-3), DNA binding / alpha-1,4-glucan-protein synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT5G15650.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96890.1); contains InterPro domain Alpha-1,4-glucan-protein synthase (UDP-forming); (InterPro:IPR004901) -0.329567010324343 -3.22428503773968 0.00849134088385414 1 3.62118214692334 5.20113247480506 -0.329567010324343 0.104808267823638 AT5G58660_at 1.15501570874404 1.15534648780479 2.03370234798310 2.19045306708716 1.59385502458968 1.91608220261667 1.08968223790665 1.32240623924852 1.20912659867550 1.41777940727532 1.36289415684781 0.96211670769981 1.53727317067845 1.74347928746824 1.31636684083515 1.7149069153538 1.2832885463872 1.35614063308144 1.47896209653473 0.181902604108864 0.182938874314606 0.188305174813263 0.177220634413213 0.182109001548039 0.183679987666221 0.178445878448525 0.179485014622684 0.182378500613099 0.179657961551629 0.188998456210651 0.187908449364857 0.185373658113616 0.179655770815607 0.178414630610121 0.179064679676226 0.188580407043497 0.182546191309326 0.185826755001469 5 5 + 23720418 23721002 23720728.818 23718693 23721214 + gene protein_coding_gene TRUE TRUE AT5G58660.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G47190.1); similar to H0321H01.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66494.1); similar to Os04g0407800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052718.1); similar to OSJNBa0042I15.12 [Oryza sativa (japonica cultivar-group)] (GB:CAE04890.3); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.294765090526743 3.2234729391211 0.00850337976681653 1 3.61992497657384 2.94615840605883 0.294765090526743 0.0739414832817501 AT5G39080_at 9.22071125613304 9.45222299808423 9.88174430251574 10.1890241681642 10.4133008575652 10.0654953039914 9.80029039463898 9.88483297717623 9.6021846315724 9.86548709907672 10.0241454350200 9.91584143573318 9.85835450592666 9.78125906729483 9.4896534485585 10.1669091034451 10.1867092220845 9.9727337284389 9.7431979706401 0.103686243422686 0.101199915627491 0.101705685288984 0.102631449074176 0.0988264450082783 0.101948571561667 0.0987512607364787 0.0968576566571147 0.112266764918946 0.0968576566571147 0.103714656736352 0.0968576566571147 0.0978682601255468 0.107597082670497 0.101411523621928 0.0968576566571147 0.106888128659957 0.0983380164551343 0.0994286948522857 5 5 + 15659739 15660221 15659938 15658886 15660389 + gene protein_coding_gene TRUE TRUE AT5G39080.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G39090.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.312826163685516 -3.22291061276319 0.00851172612661673 1 3.61905444421589 19.6941564374882 -0.312826163685516 0.090937674245399 AT5G26680_at 3.21247849659722 2.83571739013201 2.98811228372109 3.44796713890748 2.92339428117925 2.9936929969803 2.94895543696723 3.07843480670468 2.67372327211228 3.21668535834808 2.92509319136906 3.05083692126415 3.41885260482085 2.77283063100083 3.01350615618068 3.16852929571255 2.85049988069332 3.02159284539689 2.77299005259728 0.216495795122633 0.216495795122633 0.229428406041774 0.222875208503271 0.224908552654458 0.219759358235815 0.2190699062327 0.227037569456966 0.222118227037409 0.220163662198175 0.2193565736788 0.216495795122633 0.219760134953075 0.21722272419949 0.220576848592123 0.217750637246029 0.223139555643554 0.221642300727996 0.216495795122633 5 0|5 /|- 9312159 9312668 9312294.667 9311885 9315478 - gene protein_coding_gene TRUE TRUE AT5G26680.1 endonuclease, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29630.2); similar to Helix-hairpin-helix motif, class 2 [Medicago truncatula] (GB:ABE81801.1); contains InterPro domain XPG I; (InterPro:IPR006086); contains InterPro domain 5'-3' exonuclease; (InterPro:IPR002421); contains InterPro domain DNA repair protein (XPGC)/yeast Rad; (InterPro:IPR006084); contains InterPro domain 5'3'-Exonuclease N- and I-domain; (InterPro:IPR000513); contains InterPro domain XPG N-terminal; (InterPro:IPR006085); contains InterPro domain Helix-hairpin-helix motif, class 2; (InterPro:IPR008918) -0.330832882341461 -3.22216580388232 0.00852279386213114 1 3.61790138429074 6.01135272981066 -0.330832882341461 0.105991176321332 AT5G54540_at 11.1006542863499 11.2665750492579 11.8851747852555 11.9368059812346 12.0478839299273 11.9436703960789 11.2648400789742 11.1175729388566 10.7212586289610 10.8183520590222 11.8112787702008 11.5752223550212 11.4752608489623 11.548785375548 11.6328700406601 11.6233399300283 11.7113348567194 11.5948183053533 10.7096546081860 0.0738738669041375 0.071281390957482 0.0722232449416476 0.071281390957482 0.0735122808079861 0.0752397534579927 0.071281390957482 0.0721952081186802 0.0838085680212562 0.0755473029145790 0.0735758227901794 0.071466224405745 0.0780329854801006 0.0747340730140 0.071281390957482 0.071281390957482 0.078908798854891 0.071613079770736 0.075478712295976 5 5|0 +|/ 22174350 22175041 22174731.222 22173724 22175280 + gene protein_coding_gene TRUE TRUE AT5G54540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25170.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94497.1); similar to Os08g0179900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061135.1) 0.269577826593623 3.22083952323322 0.008542538536213 1 3.61584805243513 22.7560816352593 0.269577826593623 0.0433478793188815 AT5G44160_at 2.55934400887658 2.73963914497989 2.78751998366437 3.20087738865681 3.297523064666 3.29392087264133 2.44345253015045 2.42171350932325 2.64506707095386 1.83879719652360 2.52427496406777 2.32263202857481 2.77522908920826 2.89332613988384 3.00261614953349 3.13968047304928 2.81748993035511 3.48353808051252 2.15220767827614 0.207970461759635 0.205752437207179 0.2161807044486 0.204598443949381 0.204655437218286 0.213804351395682 0.205260400651872 0.202366558480081 0.211471155270093 0.212764371615919 0.211398954510924 0.206659344772897 0.207782025459900 0.205592904522273 0.202366558480081 0.202689602315795 0.209399095964469 0.206609833836451 0.205610886904719 5 5 + 17792190 17792697 17792396.818 17790168 17792913 + gene protein_coding_gene TRUE TRUE AT5G44160.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G03840.1); similar to Os01g0242200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042553.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE79766.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.298730211250292 3.22073479464655 0.00854409964370385 1 3.61568590859485 5.38393498227784 0.298730211250292 0.0781349455928254 AT5G17580_at 1.31265979716471 1.88598040978156 2.08859830824172 2.11935316034561 2.30350042348362 2.17398103001405 2.26809924899251 1.74016151977137 1.62375598346592 1.99819449852297 2.35401684913652 2.56873010153779 2.19999675258849 2.92799353858465 2.12691846741987 2.69822255241724 2.31462261645461 2.08325635356004 1.45017721804407 0.21813861274497 0.215883379514758 0.220425120165926 0.220689318643467 0.218849493902552 0.224772126189054 0.221062821658553 0.214352131645477 0.219390353042003 0.212721462434362 0.212721462434362 0.219551493611906 0.212727133371411 0.229743765298966 0.221918381390196 0.213035469098293 0.219767344997447 0.213131940314644 0.220529154891319 5 5 + 5796434 5796971 5796653.273 5795304 5797180 + gene protein_coding_gene TRUE TRUE AT5G17580.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G03510.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97835.1); similar to NPH3 family protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85278.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97836.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) 0.372358698044335 3.21999425812682 0.0085551465532158 1 3.6145393705467 4.03650618087775 0.372358698044335 0.136826598248501 AT5G20935_at 7.97515433917756 7.96078449998166 8.35794940881992 8.33679812284907 8.91122899865882 8.66963361064913 8.36967472602937 8.37353624641081 8.11198708773072 8.5328511840922 9.07120712674676 9.15040181941305 9.00265846959202 8.83455763372446 9.17522349333331 9.29602239873366 8.84274499545539 8.44702822242052 8.03419481752211 0.121043716984444 0.120345673414933 0.121299466538139 0.130698246660014 0.116318856482207 0.125527748819649 0.118976609725322 0.123434540534161 0.142698996182614 0.116274148288929 0.119776884377192 0.123113171545087 0.118504228186851 0.125839662581026 0.117769580308663 0.119409492145543 0.13573424159206 0.12188979529459 0.126171785144619 5 5 + 7103499 7103856 7103615.364 7103472 7104025 + gene protein_coding_gene TRUE TRUE AT5G20935.1 similar to Os07g0164200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058958.1); similar to hypothetical protein Tery_2896 [Trichodesmium erythraeum IMS101] (GB:YP_722537.1) -0.268322278755582 -3.21548355674139 0.00862275006806571 1 3.60755498893049 16.9712574355932 -0.268322278755582 0.0420480500277211 AT5G19300_at 3.53719552919367 3.38537008810717 4.01732240538533 4.51280290837927 3.67880211551238 3.76885413608989 4.1526809139095 3.61797123524750 3.4036276393368 3.54125846591735 4.26586115185244 3.76970766786755 3.73857949280444 3.86199765698656 3.80042012134572 3.97481958961639 3.71860736518081 3.96232252730617 3.73097939948401 0.235304443839419 0.229114578891306 0.245502145980243 0.239474243371501 0.244538445992214 0.242273988888479 0.237068960752111 0.227738219378723 0.233230693861926 0.232263338139575 0.240847683180601 0.228060295389416 0.232398372391191 0.234351773163145 0.237699117859946 0.233146241184734 0.241114258498656 0.238526672610739 0.228727279353981 5 5 + 6496958 6497953 6497437.5 6495578 6498216 + gene protein_coding_gene TRUE TRUE AT5G19300.1 similar to Os04g0244500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052303.1); similar to OSJNBa0091C12.1 [Oryza sativa (japonica cultivar-group)] (GB:CAD39923.2); similar to MGC82267 protein [Xenopus laevis] (GB:AAH70663.1); contains InterPro domain Protein of unknown function DUF171; (InterPro:IPR003750) -0.360925931795734 -3.20721980431802 0.00874801884724544 1 3.59475641051166 7.55645555724445 -0.360925931795734 0.129799731087827 AT5G05140_at 4.64082720142967 4.85269467951141 6.27155884884159 6.25280640951736 7.21337146385696 5.91179224736921 5.46174247620942 4.88410042295313 3.68945701532779 4.04795180692977 5.55112348711351 5.22215114737268 5.83453273381388 5.17398465953123 4.77311444501297 6.0918067302886 5.40385311227877 4.97253329869818 3.75921309398596 0.263747594005696 0.268702582192764 0.268097549383493 0.271686867545352 0.268959206811436 0.284995269116509 0.273339545178077 0.265786633692999 0.282121247090519 0.273365017264396 0.272544843732686 0.264553738634148 0.263747594005696 0.274707248351197 0.279175001554998 0.263747594005696 0.280244613708391 0.267666983044713 0.279355322738237 5 5|0 +|/ 1521443 1522225 1521701.7 1519914 1522668 + gene protein_coding_gene TRUE TRUE AT5G05140.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT3G10820.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT94036.1); contains InterPro domain Transcription factors TFIIS, elongin A, CRSP70, conserved; (InterPro:IPR010990) 0.553185384808156 3.20641258659157 0.00876035439451838 1 3.59350602033245 10.2911590973002 0.553185384808156 0.249163758841146 AT5G64830_at 6.27996238305669 6.17380283517917 7.30302892403195 7.6123142194562 7.82328175286753 7.52861667969099 5.99590486668149 6.10847381388486 5.78093183476998 5.40003044032842 6.97555845317031 7.07685595523845 6.85264924384909 7.18322474583943 7.0485159022722 7.35601440684843 6.68728654840456 7.02314955654048 6.11856436464324 0.197461027541628 0.194733960964831 0.199805899812801 0.199908771561045 0.201471900488006 0.208432529266415 0.202552993576342 0.196431800428899 0.211688347594535 0.207818344570828 0.194310264657841 0.197696224851855 0.197459423092353 0.206702606821738 0.193923719457072 0.196587298061367 0.201472214673461 0.205229240086162 0.194170270261898 5 5|0 -|/ 25932143 25932852 25932500.6 25931864 25933850 - gene protein_coding_gene TRUE TRUE AT5G64830.1|AT5G64830.2 programmed cell death 2 C-terminal domain-containing protein similar to zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02220.1); similar to OSIGBa0138H21-OSIGBa0138E01.15 [Oryza sativa (indica cultivar-group)] (GB:CAH67824.1); similar to Os04g0640800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054039.1); similar to B0414F07.2 [Oryza sativa (indica cultivar-group)] (GB:CAJ86029.1); contains InterPro domain Programmed cell death protein 2, C-terminal; (InterPro:IPR007320) 0.29784567635242 3.2057810644251 0.00877001740392302 1 3.59252775982178 13.2491310500732 0.29784567635242 0.078625976132522 AT5G48470_at 3.90793231341314 3.5243068802328 4.40991804705584 4.14301017221203 3.65217660854549 4.15142134813109 3.35276153698063 3.20276992092406 3.03766297676253 3.6555756918388 3.53328667277382 3.35283308886337 3.36242338510129 3.12992693409777 3.88654414799241 3.51421234537253 3.60492641221035 3.17093121127344 3.68552747388780 0.188335701035166 0.188796994877112 0.191683347394636 0.190505485271466 0.194943167068265 0.197278323008725 0.189651776300829 0.194246496435929 0.198624600036275 0.192837907007946 0.188335701035166 0.188335701035166 0.191738416890131 0.191255651363564 0.192006167080168 0.191383902166567 0.202013434131027 0.202234484291214 0.188335701035166 5 5|0 +|/ 19660287 19661196 19660670.778 19658970 19661588 + gene protein_coding_gene TRUE TRUE AT5G48470.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX94817.1) -0.348791051499072 -3.20487574366494 0.00878388880434958 1 3.59112533306468 7.24502422287372 -0.348791051499072 0.121156938487505 AT5G45130_at 10.3418131737188 10.5976053999025 11.3624362790184 11.3170301389838 11.3780359615514 11.1769739471005 10.0357684093744 10.1015528762415 10.1108308474256 10.0067689335064 10.9097719560840 10.7185700493819 10.7153868218338 10.7515567703759 10.5593586260981 10.725829799531 10.8210485409801 10.8007921478603 9.89066904185095 0.078256791599523 0.0776879872663172 0.0794258882830679 0.0776879872663172 0.0790101591233508 0.0801799914417413 0.0800122451358738 0.0829417808266825 0.0931013912625595 0.0816747063839832 0.0792384561811516 0.0776879872663172 0.078335991087364 0.0800815437045303 0.0831739860426072 0.080523611772781 0.0814344295030849 0.0831687473351188 0.0836085895627926 5 5 + 18262109 18263263 18262739.091 18261493 18263677 + gene protein_coding_gene TRUE TRUE AT5G45130.1 RHA1 small GTP binding protein Identical to Ras-related protein RHA1 (RHA1) [Arabidopsis Thaliana] (GB:P31582); similar to ARA7, GTP binding [Arabidopsis thaliana] (TAIR:AT4G19640.1); similar to ras-related GTP-binding protein [Nicotiana tabacum] (GB:CAA50609.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.278759946981400 3.20481757708281 0.00878478080202468 1 3.59103522604369 21.1654248298760 0.278759946981400 0.0579784547816802 AT5G12420_at 5.68827416452631 5.49861464263576 3.25808258086232 3.01663833769588 6.9437280375041 6.86519402220969 1.16276245906159 1.44012710180938 1.92097126457753 2.64453873260727 2.01499123562694 1.84535876107285 0.986908754295796 2.07078484290826 1.93002140822335 1.88234110589508 1.55674515453034 1.58904382979313 0.97971797979564 0.26944884653102 0.265647904220626 0.248906832381589 0.261377157772456 0.257156296420431 0.26036253492128 0.250563354237624 0.246255278464450 0.261533398647145 0.242762111110652 0.252091098674838 0.245988033536568 0.247266803867153 0.252956414038687 0.245946952768759 0.244220127454138 0.250255641275954 0.257907821534017 0.251318820404340 5 0|5 /|- 4024634 4025163 4024955.625 4024315 4026742 - gene protein_coding_gene TRUE TRUE AT5G12420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16350.1); similar to Protein of unknown function DUF1298 [Medicago truncatula] (GB:ABE82755.1); contains InterPro domain Protein of unknown function UPF0089; (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298; (InterPro:IPR009721) 0.291961183238939 3.20410265110248 0.00879575189992722 1 3.58992770477619 6.02564452438981 0.291961183238939 0.0728814520474758 AT5G55550_at 4.65856058291063 5.08363753281668 6.09928935912085 6.12525748529289 6.60342275048154 6.43860496412183 5.50004633351854 5.16696880406963 5.32481550299663 5.64042707193596 7.45395817557184 6.98456568357327 6.48810893869506 7.42194892757371 6.57352198579423 6.89611995325497 6.33124699422779 6.44899797994802 5.11130968928735 0.220361992380113 0.214378700825316 0.223865295675560 0.21790466770214 0.216267402410584 0.224501039529892 0.217161265217885 0.220123229694681 0.237616119547125 0.217579000540723 0.215852748109685 0.214378700825316 0.226716697333295 0.219090087245824 0.220165159331904 0.214378700825316 0.228939375571203 0.234415219154667 0.217366651735184 5 5 - 22519459 22519917 22519672.545 22518761 22521237 - gene protein_coding_gene TRUE TRUE AT5G55550.1|AT5G55550.2|AT5G55550.3 RNA recognition motif (RRM)-containing protein similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G26650.2); similar to RNA-binding protein, putative [Musa acuminata] (GB:ABF70162.1); similar to Os07g0584500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060120.1); similar to Os11g0637700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068335.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.318719867694855 3.20133190113763 0.00883840336808011 1 3.58563515960277 11.8013031438265 0.318719867694855 0.0978134445213997 AT5G65970_at 1.47672978663009 1.32738730784368 1.86847013346926 1.59047306683245 2.02905412790593 2.07486130235064 1.38078276893136 1.19210226866931 1.24263473771983 1.85913361275694 1.90063281960002 2.29006931914050 1.55815572371002 1.35490207887930 2.36394885162375 1.39113427765697 1.57145878927871 1.68048964682272 1.42006419659239 0.208432176498382 0.205189989574545 0.215254873904867 0.219189384593124 0.210821502551666 0.208939541651063 0.210930721072059 0.208999104579072 0.205328742920986 0.203851023944985 0.204955552612629 0.204523000673001 0.208835726750139 0.203851023944985 0.206958751761553 0.208803550438729 0.215740367554114 0.210645352654091 0.210553332329553 5 0|5 /|- 26404765 26405589 26405104.375 26404654 26407678 - gene protein_coding_gene TRUE TRUE AT5G65970.1 MLO10 (MILDEW RESISTANCE LOCUS O 10); calmodulin binding A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s Identical to MLO-like protein 10 (AtMlo10) (MLO10) [Arabidopsis Thaliana] (GB:Q9FKY5); similar to MLO8 (MILDEW RESISTANCE LOCUS O 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G17480.1); similar to ATMLO7/MLO7 (MILDEW RESISTANCE LOCUS O 7), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G17430.1); similar to Mlo-related protein [Medicago truncatula] (GB:ABE78077.1); contains InterPro domain Mlo-related protein; (InterPro:IPR004326) 0.283564937017034 3.2006477930386 0.00884896658684251 1 3.58457525088785 3.25304582234345 0.283564937017034 0.064120004567903 AT5G51320_at 0.87815212725692 0.597668018700302 1.37829933293297 0.973258012461867 0.866849990668033 1.13466746698679 0.663618327191434 0.75429797166471 0.399412804260429 0.482923686937148 1.07455321798904 0.615820809374215 0.925058111176856 1.04033674196396 0.698346050948457 0.407995037461118 0.70177178763522 1.35365427253353 0.519843995314007 0.190108033471837 0.188609477523627 0.198157979825235 0.188609477523627 0.191822603810814 0.193294991077198 0.190459841114301 0.188609477523627 0.194186586014359 0.202592705958780 0.198575010878212 0.199592666581324 0.203221537922584 0.196144369342024 0.198771853780144 0.192310566153643 0.194122876748583 0.192014098445803 0.208582731425702 5 5|0 -|/ 20873381 20874066 20873828 20873295 20874090 - gene protein_coding_gene TRUE TRUE AT5G51320.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G42556.1); contains InterPro domain Protein of unknown function DUF321; (InterPro:IPR005529) 0.319135532312145 3.19964928661454 0.00886440749228266 1 3.58302819040925 1.56564415555246 0.319135532312145 0.0983033975089367 AT5G64740_at 9.13915247749719 9.49599771977453 9.12137745785408 9.3336266076227 9.9975686638665 9.62256196510489 10.3299191897366 10.3674210078871 10.2215460770563 10.1453877719089 11.6283425324782 11.5303031605714 11.1086041270973 11.3219581444568 11.3775320892474 10.9588821826126 10.0330602903527 11.2454759289167 10.1406699226472 0.122628818078531 0.103968218910327 0.119092669121488 0.114286074705095 0.102393323479725 0.124547335918231 0.111266263299287 0.104325420932652 0.106965457322389 0.104493017201204 0.111020760760726 0.103354412470527 0.103861156662393 0.106107502331314 0.110747415876595 0.102707306371536 0.123627606826196 0.104575796523400 0.103865693774466 5 5 + 25903101 25903521 25903293.091 25898292 25903920 + gene protein_coding_gene TRUE TRUE AT5G64740.1 CESA6 (CELLULASE SYNTHASE 6); transferase, transferring glycosyl groups Encodes a cellulase synthase. Mutants are defective in hypocotyl elongation dark-grown plants. Normal hypocotyl elongation is restored in plants grown in white, blue or red light. Identical to Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC 2.4.1.12) (AtCesA-6) (Isoxaben-resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) (CESA6) [Arabidopsis Thaliana] (GB:Q94JQ6;GB:O65338;GB:Q9FGF9); similar to CESA2 (CELLULASE SYNTHASE 2), cellulose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G39350.1); similar to CESA5 (CELLULASE SYNTHASE 5), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G09870.1); similar to CESA9 (CELLULASE SYNTHASE 9), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G21770.1); similar to cellulose synthase [Populus tremula x Populus tremuloides] (GB:AAT09898.1); similar to cellulose synthase [Populus tremuloides] (GB:AAO25581.1); similar to 52O08_12 [Brassica rapa subsp. pekinensis] (GB:AAZ67558.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.317083539340127 -3.19411358381831 0.00895051118830544 1 3.57445034674756 20.3358136682533 -0.317083539340127 0.0970379456014188 AT5G23680_at 4.12698323038611 3.70258424372491 4.88963767204151 4.30017479551815 5.15630841305083 4.19316443993823 4.72940511537621 4.06089324160359 4.79108035679926 5.32428309890426 5.14067679976368 5.08454199003657 5.76703188262623 5.25409531048385 4.79188311470879 5.62914827840800 5.68064411090486 5.29473166023562 5.12163296857941 0.207952003014612 0.197963754717888 0.202279059099029 0.197318558849036 0.20636987706944 0.204692411270000 0.204011449545893 0.204329159190977 0.206636339567785 0.201020730293584 0.201612833859088 0.206553272600000 0.197318558849036 0.200059143193711 0.209363055692019 0.197318558849036 0.199636986701440 0.203634705049943 0.203062418398284 5 5 - 7985576 7986143 7985915.909 7985357 7986854 - gene protein_coding_gene TRUE TRUE AT5G23680.1 sterile alpha motif (SAM) domain-containing protein similar to sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48800.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO20060.1); similar to Os03g0850300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051905.1); contains InterPro domain Sterile alpha motif-type; (InterPro:IPR013761); contains InterPro domain Sterile alpha motif SAM; (InterPro:IPR001660); contains InterPro domain Sterile alpha motif homology; (InterPro:IPR010993) -0.532632971264731 -3.19279137956456 0.00897120290009697 1 3.57240128598898 9.59956536970007 -0.532632971264731 0.238673402533071 AT5G58410_at 7.2586287213886 7.49193834828959 7.65827192659067 8.00137810080535 7.99941803458724 7.76975625358697 5.97112337717786 6.54913875202587 6.37458868085116 6.31293623954876 6.73083266184391 6.85024021841089 6.6739858467909 6.87260282652431 6.36582115525825 7.08223445215488 6.59660172736883 7.21424162398551 6.77872751246302 0.221548998290030 0.218527010657392 0.227677468521024 0.221052619228658 0.221591421398675 0.241681164213601 0.226343985972832 0.216478822556037 0.232886624545304 0.222392061187772 0.222317811843956 0.219840621159199 0.216478822556037 0.226852455134272 0.221301878380983 0.219551925130271 0.244109282091505 0.222612853028809 0.216478822556037 5 5 + 23633695 23634530 23634064.273 23626889 23634612 + gene protein_coding_gene TRUE TRUE AT5G58410.1 binding / heme binding / protein binding / zinc ion binding similar to Os01g0977600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045575.1); similar to Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri] (GB:CAL57932.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Globin-related; (InterPro:IPR012292); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.358470048885348 -3.19049786972135 0.00900721065849612 1 3.56884674538635 13.9809921268048 -0.358470048885348 0.129386751318367 AT5G64050_at 4.22693975047618 4.25416848088579 4.30066181198672 3.82446395670485 3.48120638201501 3.4912200121537 3.59253351437226 3.56897595123201 4.50827654157114 4.73681129830777 5.58757408740404 6.62425143706514 5.83110946484477 5.89621798065482 6.29757954414977 5.43012989978162 5.0421899159769 4.4615121618725 4.07323255639641 0.264943308905644 0.255211970555211 0.271735519028247 0.267212601688791 0.256552983462194 0.267326931842875 0.264597546495016 0.258766786144003 0.25975373825825 0.256854329993969 0.26103867945282 0.258635153191223 0.256721276910267 0.255211970555211 0.256108200034007 0.259406325537432 0.263604539952143 0.257606892593665 0.255211970555211 5 5 - 25647435 25648324 25647783.364 25647081 25650435 - gene protein_coding_gene TRUE TRUE AT5G64050.1 ATERS/ERS/OVA3 (OVULE ABORTION 3); glutamate-tRNA ligase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Identical to Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) [Arabidopsis Thaliana] (GB:Q9FEA2;GB:Q940P6); similar to glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative [Arabidopsis thaliana] (TAIR:AT5G26710.1); similar to Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) (GB:Q43768); similar to Glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) (GB:Q43794); similar to glutamyl-tRNA synthetase [Nicotiana benthamiana] (GB:AAY18610.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain Glutamyl-tRNA synthetase bacterial/mitochondrial; (InterPro:IPR004527); contains InterPro domain Class I aminoacyl-tRNA synthetase, anticodon-binding; (InterPro:IPR008925); contains InterPro domain Glutamyl-tRNA synthetase, class Ic; (InterPro:IPR000924) -0.300518597855945 -3.18941061375045 0.00902433183622742 1 3.5671615921373 8.88540157925855 -0.300518597855945 0.0826616452413867 AT5G06839_at 0.709856411719405 0.799225185871333 0.791645566867764 1.07598491265360 0.752890156573705 0.597946939998582 1.20953640015939 1.11783558365086 1.35112671714196 0.712400342158214 1.32904546057582 0.402262680310016 0.854139104602375 0.597569387584385 0.80858371685155 0.724754497435554 0.465413094815795 0.954140774312896 1.08613284015497 0.237867712388819 0.236797158924829 0.241882849470155 0.239753187312929 0.241030757861941 0.244623411802466 0.235595416304768 0.238069600254792 0.243259398254585 0.242147747832172 0.235595416304768 0.241899503042738 0.24064781096416 0.24374673372813 0.236652271028605 0.241443788983809 0.242994512572178 0.242994722017769 0.241827732367899 5 5 + 2122963 2126193 2124618.455 2120528 2126455 + gene protein_coding_gene TRUE TRUE AT5G06839.1|AT5G06839.2 bZIP family transcription factor similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G08320.3); similar to TGA10 transcription factor [Nicotiana tabacum] (GB:AAY15214.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.279200282213822 -3.18846411593896 0.00903926347329925 1 3.56569455191683 1.79030275604321 -0.279200282213822 0.0602598309938969 AT5G35410_at 3.91859834796835 3.73153463321466 4.58470620816698 4.82444833594463 5.1588877792117 4.75062707008203 3.39300298438804 3.0712464977441 3.17519147195291 3.55445465304366 3.55576615337602 3.85552436260205 4.09974841353477 4.66400585037 3.93280587522128 4.2646980848671 4.02073487300331 3.96838748380435 3.02966579762758 0.20430035703384 0.200833558913584 0.207043384004561 0.197129251931484 0.202988983381392 0.211657545892776 0.197825739635461 0.198458546740434 0.203035128875337 0.209343451112832 0.206216509782518 0.200536714230651 0.206202777795471 0.206221653934111 0.197129251931484 0.204832005625586 0.199034148687096 0.206221690286324 0.199715652592418 5 5|0 +|/ 13653666 13655078 13654567.8 13651684 13655525 + gene protein_coding_gene TRUE TRUE AT5G35410.1 SOS2 (SALT OVERLY SENSITIVE 2); kinase encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition Identical to CBL-interacting serine/threonine-protein kinase 24 (EC 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) (CIPK24) [Arabidopsis Thaliana] (GB:Q9LDI3;GB:Q9LKR2); similar to CIPK8 (CBL-INTERACTING PROTEIN KINASE 8), kinase [Arabidopsis thaliana] (TAIR:AT4G24400.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95978.1); similar to calcineurin B-like interacting protein kinase [Solanum lycopersicum] (GB:CAG30526.1); similar to CBL-interacting protein kinase 26 [Populus trichocarpa] (GB:ABJ91232.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.325103559607625 3.18774602080420 0.00905060869775554 1 3.56458149730783 7.82828791274277 0.325103559607625 0.104217588287394 AT5G19480_at 5.69865192372186 5.03832817594654 7.24182730030373 6.75242274566552 7.4093690843375 6.62659294652825 5.67763316312889 4.84196710228833 4.99186021765027 5.78753499727696 6.8414039962678 7.1523924662824 7.27076993924856 7.42749072184998 6.26772324569716 7.44349736070015 7.23851231156696 6.02484255733604 5.68596394473447 0.188992369298068 0.195910876884403 0.192153897418674 0.189654329701564 0.184906513229737 0.192545853835657 0.192087874301611 0.197710547008974 0.201853863202906 0.192062274387148 0.189366545784589 0.184906513229737 0.184906513229737 0.186969087270524 0.190160113939641 0.184906513229737 0.188257361960033 0.195292328068054 0.189609018194681 5 0|5 /|+ 6571959 6572397 6572115.8 6571503 6573527 + gene protein_coding_gene TRUE TRUE AT5G19480.1|AT5G19480.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12230.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22085.1); similar to Os12g0614000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067267.1) 0.540668758699301 3.18666167506751 0.00906776783750553 1 3.56290070014450 12.3842401192847 0.540668758699301 0.243916267796203 AT5G26010_at 2.40097246946594 2.77803213310404 2.47899428500506 2.80515479117395 1.94996891253544 2.58689661437386 2.39183984733225 2.8936340507728 2.57768378052996 2.47901760730571 2.50600407716508 2.34318574559595 2.86648088618272 2.74712951340626 2.2343594897824 2.82123989169082 2.26067614834644 2.98120613954201 2.90711722606738 0.225128784110526 0.221026150081841 0.231774673343153 0.230923012778834 0.226937858542474 0.236976306192029 0.223137088697235 0.218310253508808 0.228170605449244 0.224800095567172 0.222059025892201 0.220918798839879 0.218459214769636 0.218310253508808 0.226749761495738 0.223807123618199 0.230863079788549 0.223080479217989 0.230165035147587 5 5 - 9085594 9086558 9085997.222 9085396 9087375 - gene protein_coding_gene TRUE TRUE AT5G26010.1 protein phosphatase type 2C similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G32950.1); similar to protein phosphatase-2C; PP2C [Mesembryanthemum crystallinum] (GB:AAC36699.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.409867607196509 -3.18573631138577 0.00908243738963309 1 3.56146628626663 5.16050735851957 -0.409867607196509 0.164723041986894 AT5G45170_at 9.89180522184653 9.91324471505025 10.5434388424241 10.4259986991047 10.6033980433818 10.2414067400603 10.7896772703053 10.5575624785383 10.2497342080216 10.3828262574540 10.9649677779689 10.9050885708993 10.7326016425695 10.8067808238228 10.8286600623161 10.9723296592223 10.4443790059166 10.9286876428177 10.3554440039665 0.0761545649724038 0.0754489887989519 0.0756422014300417 0.0776198576656139 0.0764065919102986 0.0776668642493625 0.0740879437735772 0.0739811483128563 0.0859225059253175 0.0767489911890307 0.0761955046838804 0.0739811483128563 0.0751928676491757 0.0808586682831911 0.0748873205524139 0.0742051718295348 0.082113091493102 0.0781472660997796 0.0749538355552901 5 5|0 -|/ 18287805 18288999 18288234.333 18287571 18290405 - gene protein_coding_gene TRUE TRUE AT5G45170.1 CbbY protein-related similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G48420.1); similar to Predicted haloacid-halidohydrolase and related hydrolases (ISS) [Ostreococcus tauri] (GB:CAL50173.1); similar to Os12g0630700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067339.1) -0.294509083511883 -3.18506827528490 0.00909304262000729 1 3.56043073066919 20.9469523620084 -0.294509083511883 0.0772310255611807 AT5G04470_at 4.13339999674675 5.30186383133468 5.68393104508471 5.91687265128523 6.56399558390834 6.28383081643326 5.41861516974977 5.85625911372466 3.79738516617916 4.61482853214373 6.53468220876885 6.89838190124282 6.45358965877684 6.41416693066022 6.20066609417492 7.07352443407925 6.0166582197249 6.1781225211122 4.83280829253919 0.296341861948852 0.287580901003732 0.293812746035121 0.287580901003732 0.291353302512864 0.315078043466475 0.300705976143923 0.287580901003732 0.293709935279491 0.287580901003732 0.299438024135654 0.287580901003732 0.291607704930105 0.300802566606669 0.287660193858776 0.299341527929058 0.311486961920057 0.293242657335909 0.288795027624489 5 5 - 1266901 1267234 1267014.273 1266626 1267417 - gene protein_coding_gene TRUE TRUE AT5G04470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10525.1) 0.507533129344251 3.18305400206776 0.0091250961135734 1 3.5573081685996 11.0879616892109 0.507533129344251 0.224944041059972 AT5G09990_at 4.22616813488766 4.69726558933476 6.82573585554019 6.9357624935685 6.94825243338169 6.21329021309018 6.63535855455496 6.30741320151767 4.99970460003294 6.08446157444005 7.31309243043175 7.00662018385541 6.71628088583582 7.30826616364275 5.61639950660442 7.5530418006301 7.74059674191089 6.93138678095527 5.10722330656354 0.251927682947186 0.2455078296708 0.246065267788732 0.251494801368270 0.247803693649099 0.255157827357743 0.242337770384836 0.246276756403105 0.252723187095256 0.246166399553882 0.248147983209661 0.241301824652302 0.243223872618406 0.243483575819792 0.244609723354772 0.241301824652302 0.246531917491941 0.246505286736377 0.243884561752356 5 5 + 3124649 3124949 3124778.091 3124569 3125075 + gene protein_coding_gene TRUE TRUE AT5G09990.1 PROPEP5 (Elicitor peptide 5 precursor) Identical to Elicitor peptide 5 precursor (PEP5) [Arabidopsis Thaliana] (GB:Q8LD63;GB:Q9FIA8) 0.405944035867446 3.18176205595028 0.00914571565368149 1 3.55530526208259 12.3088260038572 0.405944035867446 0.162501581432326 AT5G49450_at 7.66229202277905 7.9804713716297 7.71820804886936 8.25862443271895 9.31892994848258 9.18969549702112 6.72294038834624 7.16873949233992 7.62976020757014 7.52516478520314 7.67457821514095 7.54185539400871 7.90498672346605 7.55647564699784 7.36539640533945 7.8954171712549 7.90524506105245 7.73922608971577 8.22771206885615 0.127032571906395 0.129502739751196 0.132127554571655 0.123869677262445 0.132081804357190 0.130713768125026 0.131648523982302 0.122395673274858 0.134054191470343 0.123679000291543 0.122944465031792 0.128597113913086 0.125816353997685 0.129193050541842 0.125671016169961 0.126894286189033 0.129838840289576 0.135295585512712 0.126169879258116 5 5 + 20069388 20069773 20069602.909 20069055 20069961 + gene protein_coding_gene TRUE TRUE AT5G49450.1 bZIP family transcription factor similar to GBF6 (G-box binding factor 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE85416.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.364893525222154 -3.17758872661988 0.00921264709866364 1 3.5488347659982 15.7485426213976 -0.364893525222154 0.135018835791909 AT5G06730_at 1.13711289020492 0.981748295386857 2.62400559495672 2.31307316866983 1.19823923747593 1.0577237923916 0.928121829514242 0.9551533121891 1.32802554355309 1.02089025819409 0.94227977996597 0.96511943056828 0.848316677788578 0.798745967273468 0.971987892315855 0.962207950766827 1.0389181415041 0.959257670172063 0.691821974152969 0.192025779034220 0.189817412902207 0.200744004872418 0.193812485389611 0.188979528600015 0.195002620319376 0.195387263155855 0.192878858074901 0.193838744309693 0.203943643604432 0.193069386113829 0.189261191795070 0.196138363712381 0.201811160997941 0.192501628215781 0.196142542317903 0.192662235198901 0.193636481666921 0.190571986972445 5 5|0 -|/ 2080381 2080868 2080576 2079956 2081685 - gene protein_coding_gene TRUE TRUE AT5G06730.1 peroxidase, putative Identical to Peroxidase 54 precursor (EC 1.11.1.7) (Atperox P54) (ATP29a) (PER54) [Arabidopsis Thaliana] (GB:Q9FG34;GB:P93729); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06720.1); similar to Peroxidase A2 (GB:P80679); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.282292540378562 3.17711521464452 0.00922027268568661 1 3.54810055899999 2.37411398881254 0.282292540378562 0.0650493173810539 AT5G63490_at 7.02927191410914 7.32811228487457 7.94486474833418 7.9176027660336 7.96518150140974 7.55112289372093 7.34734515858622 7.21126131977569 6.3255904912056 7.04787857172403 7.33196301959638 7.61379648668525 7.10501028112268 7.53553625054244 7.28359790056744 7.93270288409981 7.39599282166915 7.3060831921038 6.59701412950559 0.168450515655745 0.160843785607666 0.165062258950195 0.161412265419719 0.156044164141281 0.165891817691573 0.155656482715977 0.159991845386704 0.182731430209242 0.163041428775797 0.167991385093501 0.155656482715977 0.158615347136423 0.158954058482110 0.155656482715977 0.157592208860652 0.167403838307225 0.157564792496100 0.159677885638769 5 0|5 /|- 25435960 25436871 25436366.222 25435820 25439410 - gene protein_coding_gene TRUE TRUE AT5G63490.1 CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50530.1); similar to CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50640.1); similar to Octicosapeptide/Phox/Bem1p; CBS [Medicago truncatula] (GB:ABE86173.1); similar to Os12g0169400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066263.1); similar to CBS domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95929.1); contains InterPro domain CBS; (InterPro:IPR000644); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) -0.309062638474819 -3.17674434546126 0.00922624976972108 1 3.5475254976285 14.5843018660356 -0.309062638474819 0.0915739033519763 AT5G10660_at 3.21200142766583 3.23937829885524 3.19019701273147 3.14281551856849 2.98904316088989 2.99170577000077 2.58920049724175 2.76165685030275 3.39896401197271 2.74210537115061 3.34381581911102 3.07711584739339 3.17266423477665 2.63945791116144 3.58838478747745 3.07419590981785 3.05828537170172 3.34281595389941 2.62712354016493 0.196225333365159 0.205526494861723 0.201026180855270 0.208996691850445 0.200239577895420 0.202359859521595 0.199954840165147 0.200153325597817 0.208055000860271 0.211335444689647 0.216197054620070 0.196278147153562 0.199265703572746 0.197805805888956 0.198793389105840 0.198663747005631 0.208059253728254 0.200382114932207 0.203736458732647 5 5 + 3371190 3371708 3371417.818 3370519 3371935 + gene protein_coding_gene TRUE TRUE AT5G10660.1 calmodulin-binding protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24880.1); similar to retinitis pigmentosa GTPase regulator-like protein [Takifugu rubripes] (GB:AAG00554.1) -0.259298454709543 -3.17597476416770 0.00923866525955987 1 3.54633218043558 6.05691129395542 -0.259298454709543 0.0313141839214367 AT5G08335_at 6.72238106413547 7.07140601231904 8.31120715421402 8.10310731468554 8.3973097048098 8.1509673541519 6.37475386754177 6.25405203266488 5.37781309185088 5.35758676024758 6.12588786763042 6.03555376052293 6.84068972552418 6.74500339002638 6.46183568218574 6.71519651481323 6.62369316458942 6.32718628437912 5.55099295053743 0.241194194308128 0.233887121153384 0.239697770469264 0.233887121153384 0.243705942903173 0.236513916504403 0.235260940428086 0.233887121153384 0.240909781211636 0.250759867918813 0.237178388058607 0.235883157450094 0.233887121153384 0.243094783069986 0.233887121153384 0.235909172642301 0.255304468797079 0.242700903692365 0.248110442762778 5 5 + 2683029 2683570 2683236.455 2682230 2683713 + gene protein_coding_gene TRUE TRUE AT5G08335.1 ATSTE14B (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE); protein-S-isoprenylcysteine O-methyltransferase similar to ATSTE14 (PRENYLCYSTEINE ALPHA-CARBOXYL METHYLTRANSFERASE 14A), protein-S-isoprenylcysteine O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G23320.1); similar to OSJNBa0041A02.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE01825.2); similar to PREDICTED: similar to Protein-S-isoprenylcysteine O-methyltransferase (Isoprenylcysteine carboxylmethyltransferase) (Prenylcysteine carboxyl methyltransferase) (pcCMT) (Prenylated protein carboxyl methyltransferase) (PPMT) isoform 1 [Canis familiaris] (GB:XP_546748.1); similar to Os04g0602900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053777.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) 0.301272419908369 3.1727926677693 0.00929018222886286 1 3.54139769210863 13.3797372628591 0.301272419908369 0.0848457640164765 AT5G38120_at 2.71168643188942 2.70515318284072 2.36040688269919 2.41739946633669 1.89804795826467 2.37460031823806 2.09072815003592 2.42863649836087 2.91470859321085 2.46497596325873 2.78224960759079 3.04204885631911 2.90260790594714 2.94291654517195 3.025145313031 2.85511615490730 2.91376221680848 3.08617850510588 2.86280403830653 0.245854325949688 0.250494444477657 0.246172088362789 0.245854325949688 0.248025916930290 0.249320636743119 0.246054025986541 0.250403513369818 0.253068679398742 0.25095171996415 0.248484885862129 0.245854325949688 0.245854325949688 0.250422395078877 0.248558619685447 0.250111567081349 0.258905957220695 0.262283156417734 0.249660354935402 5 5|0 +|/ 15231864 15232883 15232115.333 15230995 15233435 + gene protein_coding_gene TRUE TRUE AT5G38120.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein similar to OPCL1 (OPC-8:0 COA LIGASE1), 4-coumarate-CoA ligase [Arabidopsis thaliana] (TAIR:AT1G20510.1); similar to Putative AMP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM22700.1); similar to Os03g0132000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048867.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873); contains InterPro domain Src homology-3; (InterPro:IPR001452) -0.320307718731101 -3.17212184572723 0.0093010798732884 1 3.54035738231535 5.21895702926765 -0.320307718731101 0.101583978220738 AT5G34870_at 1.07099565287037 1.07113399579414 1.32557052872048 1.15465124769232 0.984891799858809 0.851829021964956 1.23910134408637 1.18855395369554 1.79953716503934 1.46580266974889 1.30493534080250 1.12001928474442 1.55978398063973 1.08851331565144 1.27521350209045 1.23695528005433 1.26210747863329 1.19326013614904 1.38817460506795 0.240757060468180 0.245753585687552 0.257393278962434 0.245305055574432 0.248055607809488 0.243558989869158 0.241590864835977 0.251354472590116 0.247873858124801 0.254536427818723 0.240757060468180 0.247146628703735 0.249770828584446 0.244927025980641 0.245460698594636 0.244018596301139 0.249410718936346 0.245965461974552 0.256035161198689 5 5|0 +|/ 13203874 13205028 13204182.889 13202751 13205176 + gene protein_coding_gene TRUE TRUE AT5G34870.1 zinc knuckle (CCHC-type) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G06479.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) -0.262456266455839 -3.16992692690004 0.00933682784606114 1 3.5369533517858 2.51397595298423 -0.262456266455839 0.0384921818013532 AT5G16190_at 2.84295963904142 2.8343497287286 3.1286780816822 2.74686516774425 2.49169111766227 2.61707112059326 2.73201482763609 2.83403679280473 3.06516356234659 3.14563071888473 3.27488218627813 3.57677493702605 3.15999853996699 3.58138866335679 4.01759720389239 3.19445000957051 3.23448383102213 3.70111917943780 3.06504146384846 0.186863919682614 0.192123808389811 0.191276788366963 0.192335714625495 0.186770504496285 0.206954809533902 0.203317925658498 0.194638754193214 0.195867760128445 0.188628051655256 0.188346378213344 0.189774509288522 0.197474371045047 0.193262940778302 0.201424136527973 0.186770504496285 0.189429261689669 0.188744961529642 0.194727409279898 5 5|0 -|/ 5283921 5285441 5284674.6 5283576 5286296 - gene protein_coding_gene TRUE TRUE AT5G16190.1 ATCSLA11 (Cellulose synthase-like A11); transferase, transferring glycosyl groups encodes a gene similar to cellulose synthase similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA10 (Cellulose synthase-like A10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G24070.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.3); similar to Os06g0625700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058114.1); similar to cellulose synthase-like protein OsCslA9 [Oryza sativa] (GB:AAL25128.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) -0.287693488390542 -3.16891397161467 0.00935337268729048 1 3.53538231223534 6.05822434307599 -0.287693488390542 0.0717673899267358 AT5G05660_at 4.59734611513571 5.00099397782358 5.4282344331818 5.51092662163619 5.48786187378574 5.57393072250327 4.58506427957745 4.71112094780024 5.41109421435115 5.65841709010636 6.3509846530659 6.2089843088943 5.73618019206941 5.9503855365441 6.18787484995472 5.91326417717907 6.33651861224425 5.97844337022614 5.3881673054413 0.244279023907802 0.230056777103280 0.226097825855456 0.232905711299003 0.234771375435764 0.235112857790469 0.225124956090857 0.250934170550850 0.229878605070937 0.227560916260016 0.237351094437407 0.23492132434845 0.222686062415368 0.226281016567327 0.233203044198413 0.233639839494049 0.247725300799346 0.239586511714174 0.222686062415368 5 5|0 -|/ 1691399 1691874 1691685.833 1690857 1695468 - gene protein_coding_gene TRUE TRUE AT5G05660.1 transcription factor similar to NF-X1 type zinc finger family protein [Arabidopsis thaliana] (TAIR:AT1G10170.1); similar to MGC154926 protein [Xenopus laevis] (GB:AAI26052.1); similar to PREDICTED: similar to nuclear transcription factor, X-box binding-like 1 [Strongylocentrotus purpuratus] (GB:XP_786259.2); similar to PREDICTED: similar to CG15011-PA [Rattus norve (GB:XP_001077093.1); contains InterPro domain Zinc finger, NF-X1-type; (InterPro:IPR000967) -0.29182565890547 -3.16886974625216 0.00935409571041153 1 3.53531371992654 10.8962960376747 -0.29182565890547 0.0760393066216899 AT5G04930_at 10.5236438055036 10.4108818407363 11.1263065769913 11.2628779225854 10.3034110455890 10.3716530638989 8.16162570152069 8.41041239801861 9.4634649599979 8.59935435849458 9.5241810610235 9.61701648696626 9.44285473265475 9.39179496339796 9.28955526822754 9.65551668312898 9.15602418607602 9.81527720445032 8.7207268214371 0.100399247287880 0.101659560124263 0.118838995981052 0.105040632847161 0.104258826656071 0.106559689177515 0.108532926633373 0.109951095582256 0.113891400138768 0.109893870671333 0.100837006338462 0.100669892254631 0.100913319496992 0.111821575505224 0.107939350822308 0.104409924311184 0.110345999942489 0.106491698422127 0.112474234369424 5 5|0 +|/ 1448977 1449539 1449275.2 1444871 1449818 + gene protein_coding_gene TRUE TRUE AT5G04930.1 ALA1 (AMINOPHOSPHOLIPID ATPASE1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. Identical to Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1) (ALA1) [Arabidopsis Thaliana] (GB:P98204); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G59820.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G13900.1); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G27870.1); similar to phospholipid-translocating P-type ATPase, flippase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95802.1); similar to hypothetical protein DDBDRAFT_0190219 [Dictyostelium discoideum AX4] (GB:XP_645920.1); similar to phospholipid-transporting atpase 1 (aminophospholipid flippase 1) [Aedes aegypti] (GB:EAT48161.1); contains InterPro domain Phospholipid-translocating P-type ATPase, flippase; (InterPro:IPR006539); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Haloacid dehalogenase-like hydrolase, type 3; (InterPro:IPR013200) 0.27255332978187 3.16759913826202 0.0093748927026948 1 3.53334300184058 19.2785396876307 0.27255332978187 0.0541522267297325 AT5G37160_at 1.75316293661367 1.94422852864841 2.22969405853185 2.23408203023175 1.29516899678414 1.26235514984126 1.48762063088351 2.34598403368862 2.31334555096720 2.25307768187655 2.18643012500257 1.95859263218495 1.88436505485931 2.36465960601375 1.49615673060877 1.86562159328031 1.36395704272308 2.09284538729796 2.12855213267009 0.250310203047316 0.241863140060141 0.256536833521531 0.264630672938301 0.260233246796204 0.247613064591589 0.249245341619954 0.261137045097147 0.249315719095041 0.244363841801106 0.252441871765769 0.250710976518655 0.258542367315036 0.251158906574634 0.248419799699166 0.24609836585476 0.254516191873733 0.250032676580824 0.24457633587989 5 5 + 14724927 14725540 14725305.182 14722656 14725606 + gene protein_coding_gene TRUE TRUE AT5G37160.1 tRNA-splicing endonuclease positive effector-related similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G37150.1); similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G52090.1); similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G37140.1); similar to putative helicase [Oryza sativa (japonica cultivar-group)] (GB:AAM76346.1); similar to Os04g0599600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053752.1); similar to OSJNBa0088A01.10 [Oryza sativa (japonica cultivar-group)] (GB:CAD41371.2); contains domain DNA2/NAM7 HELICASE FAMILY (PTHR10887); contains domain no description (G3D.3.40.50.300); contains domain SPLICING ENDONUCLEASE POSITIVE EFFECTOR SEN1-RELATED (PTHR10887:SF22); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) -0.388617783406251 -3.1664829310869 0.00939320134052532 1 3.53161169581989 3.88565553398671 -0.388617783406251 0.152287100686980 AT5G66770_at 1.55079928647359 1.42592886916074 1.72645385462538 1.73097413686444 1.42962262759223 1.92129406116127 1.87619052732401 1.87923185929737 2.05313787995826 2.06227334131503 2.79377075587073 2.55664469872234 2.90261895736737 2.91955805861095 2.49357901715493 2.74407830741556 2.5831198532288 2.37173709867311 1.16259194329135 0.221497686259975 0.22299438664678 0.228493864291351 0.219941497654900 0.219941497654900 0.227105948352483 0.223357827022742 0.225272990402807 0.225535731892326 0.231212698572158 0.223522066410747 0.221788722445954 0.223537895126263 0.226710468834372 0.227011530828304 0.219941497654900 0.236986502757226 0.234813985521262 0.232659248104270 5 5 + 26679104 26679655 26679268.091 26677826 26680120 + gene protein_coding_gene TRUE TRUE AT5G66770.1 scarecrow transcription factor family protein similar to scarecrow-like transcription factor 7 (SCL7) [Arabidopsis thaliana] (TAIR:AT3G50650.1); similar to Os03g0723000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051115.1); similar to GRAS6 [Solanum lycopersicum] (GB:ABD72962.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.303676323046803 3.16454009816169 0.00942515560770687 1 3.52859809988061 3.90754826859672 0.303676323046803 0.0877923045746855 AT5G06480_at 2.68748620362801 3.35779131333595 4.08091935976805 3.61578693742499 4.8066283461688 4.73251770246045 3.22832375921999 3.24800274483585 3.45594517970363 3.3471378052242 4.6459585037821 4.47268424782877 4.93634015056496 4.87976233240112 3.87224779998794 4.44484754671225 3.54233013386206 4.31659861163959 3.48695895108056 0.227983140259337 0.221626881873588 0.223750256162636 0.228354656921284 0.228092488396256 0.230734523318427 0.228609348859628 0.223526031683491 0.231094494799761 0.221674222449799 0.220743918484650 0.224834940007137 0.223983627197655 0.229956384016674 0.243539353197685 0.222819943460794 0.230033224313245 0.226646941988385 0.222714677101687 5 5|0 -|/ 1976235 1977159 1976602.889 1976087 1977291 - gene protein_coding_gene TRUE TRUE AT5G06480.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G11780.1); similar to Os03g0788200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051500.1); similar to putative ML domain protein [Nicotiana glauca] (GB:CAH69231.1); similar to Os07g0159800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058934.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) 0.372978121337029 3.16380544921180 0.00943726737935278 1 3.52745851331205 7.62911211811367 0.372978121337029 0.141813705046774 AT5G13510_at 10.7056388058926 10.9116324792255 10.8833313973216 10.9949742199270 11.1725186101315 11.0211176647567 11.2974547838340 11.5064932612486 11.2993642490550 11.5421470483963 12.1183624393823 12.3021564681411 11.922574750853 11.9961376803661 12.2788639759701 12.0850816095461 11.5785761753087 11.9214230828384 11.3418820171366 0.0871116665376521 0.085167629642924 0.0891080051544606 0.0905090675251306 0.085167629642924 0.095114497122322 0.085167629642924 0.0887058432174422 0.0956713423450374 0.085772129745785 0.0903234280600245 0.085167629642924 0.0874879610401075 0.0926910090741027 0.0891068468297578 0.085167629642924 0.102257555556394 0.09042742587573 0.085167629642924 5 5 + 4341446 4341871 4341671.364 4341265 4342098 + gene protein_coding_gene TRUE TRUE AT5G13510.1 ribosomal protein L10 family protein Identical to 50S ribosomal protein L10, chloroplast precursor (CL10) (RPL10) [Arabidopsis Thaliana] (GB:Q9FY50); similar to ribosomal protein L10 family protein [Arabidopsis thaliana] (TAIR:AT3G12370.1); similar to 50S ribosomal protein L10, chloroplast precursor (CL10) (GB:O80362); contains InterPro domain Ribosomal protein L10; (InterPro:IPR001790) -0.276917820908394 -3.16178048244044 0.0094707340283866 1 3.52431725467421 22.7715758832905 -0.276917820908394 0.0603255860763634 AT5G52160_at 2.56761745526214 2.47995838689541 2.62514429191560 2.38306058687036 2.39894088794758 2.53570756598542 2.40987834134435 2.52116613804676 2.55301036407676 2.72356285464085 2.7856237109316 2.57027840916584 2.90336098698643 2.64879195883997 2.61268665551802 2.48610099618025 2.66899163854572 2.63359815339216 2.54823087244571 0.18265345166347 0.1828154215189 0.186559583819303 0.183945053731579 0.184625225482299 0.183136233788638 0.192197927278516 0.181498949659962 0.198637261280971 0.185899117166849 0.188031885376100 0.187142554722347 0.191098827319569 0.191742541854827 0.191206235321657 0.187235200173942 0.18813468288271 0.188073759693660 0.191579825218657 5 5 + 21212378 21212626 21212499.273 21212270 21212989 + gene protein_coding_gene TRUE TRUE AT5G52160.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G62080.1); similar to Protein 108 precursor (GB:Q43495); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.271838802588415 -3.16060030747698 0.00949029448635708 1 3.52248640206599 5.12615775382484 -0.271838802588415 0.0540026860820403 AT5G44980_at 0.934560163526602 1.06593176970119 1.32568341178911 0.74949575380501 0.49946764681618 0.78666779377571 1.37546786098376 1.39391932158343 1.23528771448935 1.57414310358113 1.14571146088164 0.990436837264754 0.689819176195756 1.33478762823712 0.942056099948974 1.43114147489937 1.03838774396596 1.44454355523279 1.08396644733047 0.204946683009488 0.200506482107151 0.206245689261298 0.201272567499295 0.198536729554193 0.198470963770340 0.201738565550896 0.202032130488296 0.203905685228549 0.205497087008193 0.201924174575016 0.204064661037633 0.207380318375867 0.203255789760353 0.202075899486917 0.204529190613716 0.206585102863191 0.206867861495325 0.209958250026189 5 5|0 +|/ 18178579 18179194 18178887.7 18177517 18179491 + gene protein_coding_gene TRUE TRUE AT5G44980.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G44960.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.334250685446596 -3.16024066539942 0.0094962634374045 1 3.5219284619104 2.22885400802026 -0.334250685446596 0.113753017527972 AT5G17020_at 7.99054798013748 7.99344046299298 9.2647902090102 8.96677867361075 9.1916530365524 9.10153328885012 8.33982236049839 8.13880404867271 6.8689615802916 7.15229057844848 8.37558581018891 8.37835109757811 8.36615700249984 8.2519999233711 8.28460807595577 8.41246326579805 8.5392864241297 8.39110727131543 7.13132328687781 0.147971897576047 0.147719004286472 0.150917423928657 0.145906643068813 0.153899625898234 0.152987086994853 0.152568799281572 0.147171090259531 0.166671383527118 0.153442444126191 0.146035109254726 0.148814236954625 0.152957070787003 0.146954791479113 0.155881287497802 0.149974003607809 0.154052619379797 0.153376376967440 0.163008694583256 5 5|0 +|/ 5601537 5602407 5601934.111 5594739 5602958 + gene protein_coding_gene TRUE TRUE AT5G17020.1 XPO1A (exportin 1A); protein transporter Encodes a member of the exportin protein family which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals. similar to XPO1B (exportin 1B), protein transporter [Arabidopsis thaliana] (TAIR:AT3G03110.1); similar to retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa (japonica cultivar-group)] (GB:ABG00000.1); similar to Importin-beta, N-terminal [Medicago truncatula] (GB:ABE90433.1); similar to Importin-beta, N-terminal [Medicago truncatula] (GB:ABE91894.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1-like; (InterPro:IPR013598); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) 0.279733097346408 3.15724914198702 0.0095460618237563 1 3.51728724932972 16.3363229279042 0.279733097346408 0.0641351819704074 AT5G15200_at 11.6610610051103 11.9065516875359 11.7792691724021 11.8380863348490 12.0257598349411 11.8231426919994 11.7724312186584 11.9654076503733 11.3134435479306 11.3800085046273 11.8624026654305 12.1410429064571 11.8225267333906 11.6129533596933 12.2965556678925 11.5033592905365 11.4785864705883 11.6484646382197 11.3563956669247 0.0808632031818716 0.0795742941631589 0.0812389716444282 0.0821907550582395 0.0803889376787687 0.0849814662402913 0.0827553255252875 0.0802461190686388 0.0960263403779359 0.0846318239363199 0.0812649587095846 0.0795742941631589 0.0807766783376076 0.0846775988280135 0.080314322985233 0.0799041246881867 0.093573737774432 0.0843771595065711 0.0838644051759841 5 0|5 /|- 4935148 4936011 4935662.5 4934886 4936411 - gene protein_coding_gene TRUE TRUE AT5G15200.1 40S ribosomal protein S9 (RPS9B) Identical to 40S ribosomal protein S9-1 (RPS9B) [Arabidopsis Thaliana] (GB:Q9LXG1); similar to 40S ribosomal protein S9 (RPS9C) [Arabidopsis thaliana] (TAIR:AT5G39850.1); similar to 40S ribosomal protein S9 [Catharanthus roseus] (GB:CAG47084.1); contains InterPro domain Ribosomal protein S4; (InterPro:IPR001912); contains InterPro domain Ribosomal protein S4/9, eukaryotic and archaeal form; (InterPro:IPR005710); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) -0.280500973153415 -3.15530882032568 0.00957850339333733 1 3.5142767062241 23.4193065526605 -0.280500973153415 0.065216297790189 AT5G10260_at 1.91280186138263 1.83781692373508 2.23651763184694 2.53640777660401 2.56688540508874 2.18753451310586 2.63670740968102 2.40694243818566 2.52725820227921 2.35072221462982 3.63158375381135 3.89973962292082 3.01290173778576 3.5794026329535 3.76482724962857 3.38454721230788 3.29354462389743 3.53578996066759 2.46497913350585 0.204999609617123 0.198405433819178 0.200617228869663 0.194723188433902 0.194043511733290 0.202791221959549 0.191815471152286 0.194196286448766 0.213340107945358 0.201983016533638 0.202761360750965 0.199918250667566 0.205907437505696 0.194341115197427 0.200965159510178 0.193375347853583 0.200681246562287 0.202172588966664 0.193103089214725 5 5|0 +|/ 3220018 3221173 3220510.375 3219992 3221516 + gene protein_coding_gene TRUE TRUE AT5G10260.1 AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding similar to AtRABH1d (Arabidopsis Rab GTPase homolog H1d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22290.1); similar to 80A08_22 [Brassica rapa subsp. pekinensis] (GB:AAZ67607.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.309110450714604 3.15422280758815 0.00959671013311237 1 3.51259160667937 5.27042438631286 0.309110450714604 0.093554555071622 AT5G22990_at 0.678890966903653 0.73885199552581 0.645662219986684 0.696956176350884 0.430792323967067 0.53851775092004 0.242848872989170 0.639606478576533 1.24012316989149 1.09024852044523 0.748491371698603 0.402660917068195 0.513110729028508 0.682229448851074 0.701675147048395 0.422928683737317 0.684443484454648 0.951897311324124 0.99334522517887 0.167455152878367 0.168643750661944 0.16854347538452 0.168195655917649 0.170623896603171 0.164478374453573 0.171485388165502 0.169708484536206 0.177920319122401 0.172949027919145 0.172262833527956 0.168806551460312 0.165938542231255 0.175039128999832 0.176422727847699 0.167575094260053 0.177426163706296 0.179300695762306 0.16742902531966 5 5 - 7691669 7692071 7691894.636 7691497 7692471 - gene protein_coding_gene TRUE TRUE AT5G22990.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G15740.1); contains InterPro domain Phosphotransferase system, phosphocarrier HPr protein; (InterPro:IPR000032); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.286872390020290 -3.15280997012490 0.00962044872667213 1 3.51039931228123 1.44968348573076 -0.286872390020290 0.0724451883563709 AT5G66700_at 2.51317487295717 1.77749640969753 2.06970825735886 1.65460952244718 1.67979697010776 1.77971856797408 2.36557532471950 1.90082623647736 2.20795712525826 2.65814117307743 2.34610203233043 1.82661178118147 2.41887537063772 2.43887401267312 2.2529546118275 2.16992936511681 2.59182610636748 2.37523729140655 2.28692820414404 0.200460280606645 0.203036322937087 0.204870287426626 0.198735344212842 0.197573736504340 0.194235068382328 0.194235068382328 0.204171298288238 0.204250872303185 0.204150987107958 0.194235068382328 0.194450395089854 0.200018688720315 0.195668780578289 0.208609968214523 0.194762770595811 0.205261738713141 0.198700660669799 0.195132893410475 5 5 + 26651792 26652891 26652198.909 26651546 26653111 + gene protein_coding_gene TRUE TRUE AT5G66700.1 HB53 (homeobox-8); DNA binding / transcription factor Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and it's induction is inhibited by cytokinin, especially in roots therefore may be involved in root development. Identical to Homeobox-leucine zipper protein ATHB-53 (Homeodomain transcription factor ATHB-53) (HD-ZIP protein ATHB-53) (ATHB-53) [Arabidopsis Thaliana] (GB:Q9LVR0); similar to ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G36740.1); similar to homeodomain leucine zipper protein 14 [Oryza sativa (japonica cultivar-group)] (GB:AAS68139.1); similar to Os07g0581700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060106.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) -0.410238363526161 -3.15272801404566 0.00962182759048493 1 3.5102721385533 4.31106001468537 -0.410238363526161 0.167738610520358 AT5G58300_at 5.26507189943104 4.79105927180834 4.71120829151696 4.6811482728333 4.80329518020368 4.7263807896903 4.31732289558415 4.44495563542007 4.24807745005316 4.293942403467 5.63781287244811 6.57567400188764 4.73837159131306 5.68474542727944 6.36973776000527 5.27681496322417 4.93542573262885 5.26542417736005 4.59141670848761 0.223590214461784 0.219118373610213 0.218758792463537 0.223390948312428 0.218047875518215 0.224889287240610 0.218047875518215 0.222158635398181 0.220728980264792 0.226678207634055 0.218343907282356 0.226374653338512 0.218619841801805 0.221924470288743 0.244402766307377 0.225031041680717 0.222078002910159 0.220975653320080 0.218985922329165 5 5 + 23591535 23592063 23591827.545 23589105 23592310 + gene protein_coding_gene TRUE TRUE AT5G58300.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08680.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G05160.1); similar to Os01g0819100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044637.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB62593.1); similar to Os05g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055854.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.300750794440843 -3.15264663562889 0.00962319693442027 1 3.51014586089866 9.6867117811131 -0.300750794440843 0.08614533851491 AT5G56500_at 5.29723051478035 5.54615298895161 6.5773189608101 6.47416883077175 6.32395398356859 6.18481056011849 5.8906395408864 5.47029399141422 3.73014683077383 4.62802146983987 5.8501628022874 5.99359524144362 5.972827890846 5.69507689865547 6.20697733595134 6.02633515052105 6.25183470819289 6.05232731350038 4.41831204480953 0.226462146093161 0.225221644783115 0.224619016841645 0.226091220872322 0.229805051270846 0.238907517132450 0.228396530747240 0.232035320692491 0.237873857429752 0.227017794218982 0.228142676340398 0.224619016841645 0.224619016841645 0.23277866543754 0.227171493141375 0.224619016841645 0.243049718723490 0.232728479456682 0.228355932647636 5 0|5 /|+ 22893442 22894066 22893759.667 22891017 22894625 + gene protein_coding_gene TRUE TRUE AT5G56500.1|AT5G56500.2 ATP binding / protein binding / unfolded protein binding similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT1G26230.1); similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G13470.1); similar to CPN60B (CHAPERONIN 60 BETA), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT1G55490.2); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P08927); similar to RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) (GB:P21241); similar to chaperonin-60 beta subunit (GB:AAB39827.1); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain chaperonin GroEL; (InterPro:IPR012723) 0.304545152881073 3.15179442057263 0.0096375489617446 1 3.50882343172273 11.1030556461539 0.304545152881073 0.0896973591900509 AT5G67440_at 5.17191925408206 5.5743046260035 5.60818791616317 6.12499333232062 7.10396088712884 6.36562981591864 6.24938974536558 5.74585091715582 5.36329208568331 5.170068840789 6.15364033356725 6.04575688720606 6.13785715431881 5.93096185810474 5.02749042187833 6.75013813779738 6.32241082635125 4.9485319777692 5.65429950554847 0.271912289406377 0.268071221831557 0.27367938931385 0.268071221831557 0.283346279632762 0.299839642279971 0.268071221831557 0.275752208787244 0.294388809975336 0.268407683151425 0.274987417182926 0.268071221831557 0.268071221831557 0.279064696069468 0.274555225094038 0.268071221831557 0.28283489715403 0.294414618078695 0.277098577397927 5 5 - 26930179 26930741 26930466.091 26929933 26933306 - gene protein_coding_gene TRUE TRUE AT5G67440.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT4G37590.1); similar to Os12g0583500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067147.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94544.1); similar to Os03g0609800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050649.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) -0.44762415447985 -3.1499166553628 0.00966924903320532 1 3.50590948344054 11.6482721919161 -0.44762415447985 0.191746281480514 AT5G51110_at 10.5747787596428 10.7071155836031 10.9827067317904 10.9602307342497 11.1701644264438 10.9588548121044 11.4341663166859 11.5222938100429 11.3277808517382 11.3832208259160 11.9287894219962 12.0319818856522 11.856090240264 11.8989784378428 12.1208491237053 11.9463772761399 11.7847567691384 11.8142551900467 11.2030077801795 0.0840314140246106 0.0793073680184133 0.0812913757401045 0.0787913236127727 0.0783228616709246 0.08449931756836 0.0818572702210961 0.0804298251240191 0.0848847615428405 0.0790785271567818 0.079624705244013 0.0781727769618062 0.079704429706347 0.0835118598954693 0.0869706277568902 0.0773698711645323 0.0899816783362958 0.0802778213341311 0.0773698711645323 5 5 - 20795563 20796519 20796145.909 20795360 20796690 - gene protein_coding_gene TRUE TRUE AT5G51110.1 similar to dehydratase family [Arabidopsis thaliana] (TAIR:AT1G29810.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93463.1); contains InterPro domain Transcriptional coactivator/pterin dehydratase; (InterPro:IPR001533) -0.265207299224206 -3.14910630819057 0.0096829619065164 1 3.50465192360399 22.6525037030084 -0.265207299224206 0.0459284644415617 AT5G65730_at 9.67937935160566 9.98900215049495 10.1675057514161 10.3433546079023 10.7629369672861 10.6371493716580 11.5423592557431 11.6093124286571 11.8696343967027 11.8903062997406 13.3309960098085 12.3466183409203 12.9338870846914 12.8404420939489 12.381976536187 12.3267680058198 11.8658027459912 12.9629042733325 11.8373786793915 0.112886527614071 0.11256846720328 0.114660113026866 0.113360452521836 0.109541099238189 0.111598874923273 0.109607992331654 0.107971169942697 0.121699561685806 0.109414509669081 0.110217136308738 0.107971169942697 0.110153829806739 0.112697098232518 0.110006730628371 0.107971169942697 0.110999603659757 0.110346425499573 0.10864108059084 5 0|5 /|+ 26316876 26317466 26317224 26316258 26317704 + gene protein_coding_gene TRUE TRUE AT5G65730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 6 precursor (EC 2.4.1.207) (At-XTH6) (XTH-6) (XTH6) [Arabidopsis Thaliana] (GB:Q8LF99;GB:O49542;GB:Q93ZF8); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G37800.1); similar to xyloglucan endotransglucosylase/hydrolase 2 [Rosa x borboniana] (GB:ABC55454.2); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) -0.280861566986731 -3.14794109875636 0.00970271452261072 1 3.50284360916318 22.8360987414033 -0.280861566986731 0.0663714484633592 AT5G22370_at 4.37278793838513 3.91629565940717 5.06555952913608 5.13350575253276 5.16155991579032 5.07581915896437 3.91019560638858 3.9725029032228 3.12105914846592 2.87969681130656 4.02861557910328 4.41523558734722 4.21819659152465 3.96024666170014 4.59799318932432 4.21595430461872 4.11840616412961 4.12644287907107 3.42726690452344 0.233112770928305 0.218687856568905 0.218687856568905 0.222048804410990 0.218892169620262 0.224095419248734 0.219826016425907 0.226693788220446 0.225523276177839 0.218687856568905 0.219496396620432 0.22362761169358 0.218738462256655 0.227554589721878 0.233051493283908 0.219993960351942 0.223128144337183 0.218799280012565 0.223322066192521 5 5|0 +|/ 7407452 7407932 7407707.667 7406100 7408705 + gene protein_coding_gene TRUE TRUE AT5G22370.1 EMB1705 (EMBRYO DEFECTIVE 1705); ATP binding similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.4); similar to Os02g0555000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047120.1); similar to ATP binding domain 1 family, member B [Danio rerio] (GB:AAH83538.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) 0.295827791273219 3.14751480661663 0.0097099512590001 1 3.5021820217147 8.25243363682891 0.295827791273219 0.0819474713706502 AT5G64480_at 4.73903860542886 5.74213284196085 5.30204999650483 5.52095515983708 6.20824520963409 5.255565741786 5.97207676247666 6.00696408565526 4.94476213426546 4.73801888999733 5.94185367687402 6.47267568759397 5.78090979511352 5.64171369606363 5.84452655441487 5.50308715466597 5.04091053921256 5.64847052659266 4.71816401014443 0.285854816642044 0.283719315906246 0.306492931782151 0.300999139164509 0.283719315906246 0.298982579783998 0.28951692302056 0.283719315906246 0.301855250435717 0.292649891728903 0.283972915298100 0.296575133623583 0.292119971804891 0.296416419864986 0.283719315906246 0.28519454560957 0.309042930051733 0.302343571770494 0.295977329454660 5 5 + 25795413 25795935 25795657.909 25795395 25796148 + gene protein_coding_gene TRUE TRUE AT5G64480.1 similar to hypothetical protein MtrDRAFT_AC130800g2v2 [Medicago truncatula] (GB:ABE86822.1) -0.531526793465946 -3.14747514526881 0.00971062482925953 1 3.50212046856015 10.8606702830532 -0.531526793465946 0.242457724699197 AT5G62550_at 1.93774308867055 2.22735961883274 2.23171117466433 2.49987403232198 1.98177110647413 1.99232859510578 1.98370477358437 1.83792863984538 1.93933539675658 2.31121535784131 3.1309668802574 3.85734208635764 2.77098988665663 3.15522625163344 4.09407759441230 2.78887293800232 2.32806899130039 2.88736596547582 2.4511144675983 0.178335538316681 0.179506186463723 0.179814066476289 0.185993549576736 0.181964878998505 0.191936454184182 0.181513099162745 0.194552390487911 0.181187581017235 0.184450251579469 0.187138410762099 0.205045667917107 0.181292081328396 0.183418993269136 0.205524283030058 0.185316910440546 0.187845424769290 0.186599191108019 0.176941621893465 5 5 - 25123364 25123749 25123536.636 25122803 25125177 - gene protein_coding_gene TRUE TRUE AT5G62550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to unnamed protein product; gene_id:K19B1.16 unknown protein-related [Medicago truncatula] (GB:ABE84483.1) 0.286645764167898 3.14622725033896 0.0097318421712033 1 3.50018373936268 4.76680374451777 0.286645764167898 0.0728375535724406 AT5G05340_at 1.01888052182099 1.13923317178717 2.88481240753377 3.06476207942129 0.898866388650055 1.28781690918325 0.382738585975080 0.920916183485956 0.879778793929811 2.30939835411448 1.09887089624149 0.840877613766943 0.907105105469281 0.806555265049826 0.930342563696323 0.813581272323132 1.02429958555185 1.33723992731322 0.664787892255225 0.230551228552297 0.232008537595389 0.238018931735348 0.236566418879638 0.236628295800445 0.231322951065093 0.238245072729254 0.234985278450806 0.230551228552297 0.238539428599542 0.230551228552297 0.230551228552297 0.233875342204656 0.230551228552297 0.233519354086154 0.236043414641290 0.231317874864774 0.230551228552297 0.230575170715402 5 5 - 1579237 1580294 1579589.273 1578952 1580876 - gene protein_coding_gene TRUE TRUE AT5G05340.1 peroxidase, putative Identical to Peroxidase 52 precursor (EC 1.11.1.7) (Atperox P52) (ATP49) (PER52) [Arabidopsis Thaliana] (GB:Q9FLC0); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58400.1); similar to Peroxidase P7 (TP7) (GB:P00434); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.341635505309818 3.14268375573052 0.00979234789019036 1 3.49468387020259 2.57701030203703 0.341635505309818 0.120864067978775 AT5G07220_at 8.81496726664821 8.82467911044046 10.1469506439501 10.2664530632556 10.3659905201200 10.2322795601259 9.45538898185459 9.41345224083706 9.36789354296699 9.03474275323267 10.3680665525772 9.56810377233147 10.1664465360403 10.1723675160803 9.36769992720683 9.77436950741443 9.97765886133616 9.6565999202804 8.83575033759447 0.113010135923994 0.110552869260108 0.107368387344080 0.108832554095250 0.108808575709319 0.108755657062795 0.108037720711944 0.108871333697229 0.116583370585987 0.127915188781180 0.107368387344080 0.108472724176796 0.108735987458212 0.108394714929702 0.112501117052211 0.107368387344080 0.110264245189263 0.108434455407433 0.135427233821991 5 5|0 -|/ 2265558 2266222 2265811.4 2265257 2266968 - gene protein_coding_gene TRUE TRUE AT5G07220.1 ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3); protein binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2), protein binding [Arabidopsis thaliana] (TAIR:AT5G62100.2); similar to Ubiquitin; Apoptosis regulator Bcl-2 protein, BAG [Medicago truncatula] (GB:ABE86297.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71291.1); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.256745065128815 3.14131466140360 0.00981582773673502 1 3.49255874680614 19.1704583161155 0.256745065128815 0.0319155494035744 AT5G13330_at 2.00810080304376 2.20575102723151 3.06479265471337 2.93844998716648 2.15933391996619 2.22828075531966 1.25841245603937 1.49244117793639 1.87245217650431 1.59607418743994 1.80314557530221 1.41310855579146 1.30477432066440 1.65272152913299 1.77824430704352 1.6111469219162 1.90589762792304 1.58531069022712 1.43204601446022 0.232605408527852 0.232605408527852 0.261095680488453 0.239583273669119 0.250102812200418 0.237720370861378 0.238731773264222 0.240708943750145 0.240943871213698 0.2368319172065 0.235883853048485 0.233803354802941 0.238881804400413 0.23625985789488 0.241057709051714 0.240852887626386 0.239311045409603 0.241525920692453 0.237413022095642 5 5 + 4273973 4274318 4274133.455 4272063 4274663 + gene protein_coding_gene TRUE TRUE AT5G13330.1 RAP2.6L (related to AP2 6L); DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G07310.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80204.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.273573967005883 3.13978269633765 0.00984216869022653 1 3.49018071684655 3.80210425624456 0.273573967005883 0.0585710634911263 AT5G13120_at 10.0195433971235 9.97957473377036 10.1859705701532 10.1698833048717 10.4917273522503 10.4272647294004 10.4789843090897 10.6874446979164 10.6235973580023 10.5674112686664 11.3623597759883 11.3363681455904 11.1219897937675 11.2713490935433 11.4931402600294 11.3393824013249 10.9168404905224 11.0089683453159 10.4630161748181 0.0721226793421733 0.0756274592382191 0.0779439881162091 0.0738866920466338 0.0734392155545189 0.0766028799724174 0.073682479288917 0.0729325913442645 0.0769555586257062 0.0762651025706741 0.0744378167102583 0.0709362756086265 0.0719014213988439 0.0718887387405099 0.0731099266874344 0.0709362756086265 0.0778734250451644 0.0721115820213069 0.0760464448541707 5 5|0 -|/ 4162725 4164397 4163525.4 4162506 4164787 - gene protein_coding_gene TRUE TRUE AT5G13120.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein Identical to Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplast precursor (EC 5.2.1.8) (PPIase CYP20-2) (Rotamase CYP20-2) (Cyclophilin of 20 kDa 2) (Thylakoid lumen PPIase of 20 kDa) (TLP20) (CYP20-2) [Arabidopsis Thaliana] (GB:Q9ASS6;GB:Q53YK9;GB:Q8L9L5;GB:Q9FY98); similar to ROC4 (rotamase CyP 4), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G62030.1); similar to cyclophilin-like protein [Triticum aestivum] (GB:AAP44537.1); similar to cyclophilin-like protein [Triticum aestivum] (GB:AAP44535.1); similar to Os05g0103200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054392.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) -0.259767116224313 -3.13746494207484 0.00988215739722477 1 3.48658273358422 21.1963698311999 -0.259767116224313 0.0384895738893615 AT5G67200_at 1.25627063676338 1.83255113769201 1.34011213864333 1.80220701870042 1.42148876067496 1.63992426159150 2.05232556307262 2.3226539264752 2.20031495960696 2.54260701234081 2.13127825458466 2.96912342573353 2.08927598836904 1.81186121642533 2.6030812578001 1.79653591280857 2.04927899278268 2.54838123318543 2.25875156180972 0.171701618524272 0.178441839489746 0.177055277108780 0.180295862709981 0.177829211712868 0.190492477702917 0.171701618524272 0.178829238767444 0.182221496044927 0.175154595283686 0.171701618524272 0.188217997833343 0.178081738821804 0.175971119708920 0.184603518696036 0.177262236419170 0.190278449658868 0.175687515482358 0.173520770846088 5 5 - 26831207 26832337 26831464.727 26830951 26833792 - gene protein_coding_gene TRUE TRUE AT5G67200.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G50230.1); similar to putative receptor kinase [Malus x domestica] (GB:ABA82078.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -0.368261173595815 -3.13032144920532 0.0100064479122352 1 3.47549203935511 4.00031328701684 -0.368261173595815 0.141272651571740 AT5G46270_at 6.12807145837455 6.49825913948603 7.25911107473231 7.06200267568322 7.58097075597576 7.05200927261552 6.71477135208072 6.50358228057914 5.7501674463479 6.1748195271581 6.34156381647456 6.41708420925038 6.60859438273796 6.81290160802765 6.15724619732646 6.98840651046682 7.17770441926542 6.37711928980134 6.0154368419245 0.193145869834809 0.194136189598693 0.19499957823701 0.20089797516239 0.188771469671543 0.192464640776271 0.191725192251896 0.188336069094604 0.199858447572843 0.188581361229138 0.190580308602908 0.190507738017692 0.186237832625773 0.191787829407078 0.195601035106571 0.190792389643906 0.220545174070251 0.194748956680622 0.188939946024684 5 5 - 18782245 18782673 18782451.182 18782099 18786068 - gene protein_coding_gene TRUE TRUE AT5G46270.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46520.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46510.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44392.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.342250842315262 -3.12964944101138 0.0100182217479813 1 3.47444859671977 13.1449566641804 -0.342250842315262 0.122403817712214 AT5G27290_at 8.5471932233213 8.35852822113744 8.97034724494913 8.71655630077853 9.56485276682051 9.0504290430325 9.52971777981249 9.47274960322268 9.5101263695949 10.0000608620279 10.6318382966051 10.5914742531571 10.3039243755001 10.4848943330354 10.4778271285131 10.7926964404021 10.2779166317412 10.3333087704330 9.92410048425246 0.117714871308164 0.123732807921769 0.123446062669208 0.127554470062461 0.117271308183301 0.129979375911904 0.116097123335768 0.116097123335768 0.125501910081013 0.116097123335768 0.119558863901087 0.119425807752439 0.116220824899026 0.128014028769867 0.116097123335768 0.116597793373571 0.118108064971917 0.116227802712746 0.119760356677344 5 0|5 /|- 9618670 9619306 9619030.667 9618395 9620536 - gene protein_coding_gene TRUE TRUE AT5G27290.1|AT5G27290.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54680.1); similar to stress regulated protein [Lycopersicon esculentum] (GB:AAW65813.1) -0.319968800671069 -3.12854232393704 0.0100376495738876 1 3.47272950965871 19.1753789065336 -0.319968800671069 0.104963248429524 AT5G01260_at 4.28663707060144 3.80803746586488 5.12096140844161 5.06742213597434 5.25168362735274 4.89193247580363 5.97015044563719 6.30510064794497 4.01813452144148 4.1877499781467 4.96446320628917 4.98856049504125 5.65530615412117 5.58628180238325 5.02753351514678 5.42752269795615 5.45848990469716 4.90503700314155 4.08214086525175 0.206373774691841 0.199137094594239 0.214065483822024 0.201163544625939 0.203190485912828 0.210126907604929 0.210240900847645 0.207551924146684 0.206771249699529 0.200905088118513 0.202494890651956 0.200652996604648 0.206026256340563 0.202116149115787 0.202954893205561 0.199095831251135 0.222378092434190 0.197445086292878 0.207696467888617 5 5 + 105813 106401 106167.091 105324 107404 + gene protein_coding_gene TRUE TRUE AT5G01260.1|AT5G01260.2 glycoside hydrolase starch-binding domain-containing protein similar to PWD (PHOSPHOGLUCAN WATER DIKINASE), catalytic [Arabidopsis thaliana] (TAIR:AT5G26570.1); similar to Glycoside hydrolase, starch-binding [Medicago truncatula] (GB:ABE80775.1); contains InterPro domain Glycoside hydrolase, starch-binding; (InterPro:IPR002044) -0.337616892405089 -3.1271324842177 0.0100624450600592 1 3.47054029379198 9.76156956084945 -0.337616892405089 0.119085824386396 AT5G20300_at 7.8169776834676 7.82872636378084 8.28353828478868 8.18437060446 8.62487520534751 8.31297571895965 7.62611313709567 7.16011216048608 7.9686997137035 7.69523316318005 8.45158464939209 8.54315865020328 8.02839003651554 8.34650493606246 8.11814785019628 8.50009863765358 8.25242314514736 7.51876844390893 7.57902087702181 0.176348501862283 0.176741043007613 0.184828314758163 0.178829592228236 0.176520097627183 0.176077094131981 0.182731235213443 0.175629076049007 0.186310436639812 0.183107793539826 0.179727952719356 0.174545111130640 0.180667627784226 0.187694552475966 0.175545230313487 0.178398985889939 0.177058141749922 0.186161967354111 0.186934410731888 5 5 - 6853546 6854095 6853835.364 6853418 6856979 - gene protein_coding_gene TRUE TRUE AT5G20300.1|AT5G20300.2|AT5G20300.3 chloroplast outer membrane protein, putative|GTP binding similar to ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120), GTP binding / protein translocase [Arabidopsis thaliana] (TAIR:AT3G16620.1); similar to AIG1 [Medicago truncatula] (GB:ABE78362.1); similar to Os12g0197400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066359.1); similar to AIG1 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96654.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917)|similar to ATTOC120 (Arabidopsis thaliana translocon outer complex protein 120), GTP binding / protein translocase [Arabidopsis thaliana] (TAIR:AT3G16620.1); similar to AIG1 [Medicago truncatula] (GB:ABE78362.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917) -0.311920379400750 -3.12423328834779 0.0101136303492843 1 3.46603813231636 15.9634790422666 -0.311920379400750 0.0985668170608046 AT5G49580_at 8.04285843990188 7.82539778508923 8.7002747917273 8.48933760262592 8.6474543737222 8.67342364128117 7.74837140695185 7.4658134885949 8.2765006551604 8.17494333026723 8.68228662465824 8.54708295745561 8.68357930631434 8.41469646784218 8.4291553805395 8.74899835533797 8.71623046779856 8.3914166733205 8.34362742694615 0.129174055908784 0.130459031287519 0.123423156202240 0.122959944754967 0.124155792157528 0.133348798384302 0.130007702030753 0.134765938588515 0.131012777393044 0.133448644806705 0.1242195431535 0.122288708844975 0.132130635515795 0.125378947302270 0.127857749905124 0.12217795116786 0.129527154198221 0.12217795116786 0.125265076626756 5 5 - 20141090 20142013 20141410.636 20141049 20144039 - gene protein_coding_gene TRUE TRUE AT5G49580.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative [Arabidopsis thaliana] (TAIR:AT1G16680.1); similar to putative heat shock protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46232.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.283449933700211 -3.12150036057277 0.0101621224533845 1 3.46179385682298 16.6199687328783 -0.283449933700211 0.0718326988481902 AT5G53460_at 9.86883212061923 10.0036464029294 10.4573441329936 10.5230752526820 11.1869328964419 10.8837471093363 9.79453061155911 9.71632863996957 9.55929101372955 9.7578627399558 10.7625979590230 10.4828613680011 10.7012128097323 10.7718650115311 10.2967252153817 10.4834681751369 10.5993958243442 10.9631360237437 9.82860827141067 0.102887047025850 0.099319062208229 0.101152476489328 0.103998428090676 0.0976753769510751 0.106156431234600 0.106138259671295 0.0989997614882528 0.111551697332345 0.105700185655926 0.0993853046616203 0.0976753769510751 0.100668737495858 0.101537633645024 0.100070938489597 0.0976753769510751 0.10460587635221 0.0983325348321418 0.105509736896396 5 5|0 +|/ 21726083 21726790 21726524.111 21717744 21727259 + gene protein_coding_gene TRUE TRUE AT5G53460.1 GLT1 (NADH-dependent glutamate synthase 1 gene) NADH-dependent glutamate synthase similar to GLU1 (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT5G04140.1); similar to GLU2 (Glutamate synthase) [Arabidopsis thaliana] (TAIR:AT2G41220.1); similar to Glutamate synthase [NADH], chloroplast precursor (NADH-GOGAT) (GB:Q03460); similar to NADH glutamate synthase precursor [Phaseolus vulgaris] (GB:AAL26864.2); similar to NADH-dependent glutamate synthase [Medicago sativa] (GB:AAB41904.1); contains InterPro domain Glutamate synthase, NADH/NADPH, small subunit 1; (InterPro:IPR006005); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Ferredoxin-dependent glutamate synthase; (InterPro:IPR002932); contains InterPro domain Glutamate synthase, central; (InterPro:IPR006982); contains InterPro domain Glutamate synthase, alpha subunit, C-terminal; (InterPro:IPR002489); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.272834755633727 3.11742607680351 0.0102348541541754 1 3.45546588290304 20.4782605491799 0.272834755633727 0.0600807912606552 AT5G55640_at 6.99764254554357 7.22365815246004 7.93883927469654 7.81775142314778 8.38565891413867 8.38713635027412 7.81540625734782 7.71085338857647 6.90472547479677 7.4511297398935 7.71546236929386 8.22879090971907 7.67306313072825 7.9396317675192 7.98853463325239 7.73311053560948 8.21198244365035 7.78376952106405 7.27784533370495 0.172337111492625 0.166927861433043 0.178124840931638 0.175471593288103 0.168791032777213 0.175600788396635 0.170738393277905 0.176110725898298 0.171324761055364 0.182801016774449 0.170404802678574 0.168521776831346 0.170511554204948 0.173533883216829 0.167592565236353 0.182809479182814 0.186519005680779 0.172533598264993 0.179682456777176 5 5|0 -|/ 22550470 22551111 22550674.9 22550385 22551343 - gene protein_coding_gene TRUE TRUE AT5G55640.1 similar to Os03g0412200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050353.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAO37502.2); similar to Os03g0595200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050595.1) -0.263705836608809 -3.11579238554068 0.0102641661980745 1 3.45292833153932 15.3448816282663 -0.263705836608809 0.0479204605420061 AT5G45010_at 8.74244218473457 8.63012813353903 9.64543402674585 9.54291844673173 9.22353867161373 9.2852982974778 8.03859310641904 8.24692974609804 7.99676639946472 7.59097574231789 8.95281072809374 8.9884527477126 8.81107783271343 8.87898236963194 8.78279308060536 9.10403589582143 8.9270161114631 8.71384180221319 7.59493439807935 0.123510198931524 0.123510198931524 0.128943018542654 0.132621583041955 0.125324496577261 0.130197574877589 0.130889370934701 0.123510198931524 0.131637221671462 0.146128182405246 0.130093993056039 0.127530515088144 0.126821491751841 0.127708710254419 0.130890757314447 0.128232671556701 0.127526238373964 0.129214552980041 0.134631747367429 5 5 - 18184681 18185418 18185089 18184471 18185601 - gene protein_coding_gene TRUE TRUE AT5G45010.1 ATDSS1(V) (ARABIDOPSIS DSS1 HOMOLOG ON CHROMOSOME V) Identical to Probable 26 proteasome complex subunit sem1-2 [Arabidopsis Thaliana] (GB:Q9FL96;GB:Q8LD17); similar to ATDSS1(I) [Arabidopsis thaliana] (TAIR:AT1G64750.2); similar to Os01g0316800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042880.1); similar to Os01g0273000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042712.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAA90391.1); contains InterPro domain DSS1/SEM1; (InterPro:IPR007834) 0.262120772250337 3.11269031015626 0.0103200592418748 1 3.44810970865808 17.2306279104962 0.262120772250337 0.0458977695594303 AT5G43260_at 10.2483697121094 10.4146104084371 11.1865489079549 11.2920940885863 11.5378448701953 11.2600969399438 10.5771233895064 10.5799734840945 10.0135037942574 9.7271184523533 10.6921210741712 10.5772468183721 10.9833509984168 10.9122798490339 10.0492107361497 10.9052509581582 11.0469257330425 10.5548280345183 9.67635542026558 0.0797060976292443 0.0797060976292443 0.0871422574410499 0.0874084351886984 0.0824074055102431 0.0904630996427494 0.0811371406197645 0.0797060976292443 0.086013268047358 0.0871371697565208 0.0814714842098914 0.0797060976292443 0.0824588598001026 0.0861805672549378 0.0867682820927766 0.079778137933658 0.0843866980006428 0.0857644417798914 0.0827189925494328 5 5 - 17374921 17375185 17375046.364 17374615 17375310 - gene protein_coding_gene TRUE TRUE AT5G43260.1 chaperone protein dnaJ-related similar to drought-induced protein 1 [Glycine latifolia] (GB:AAO91809.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.271323104987850 3.11075839651698 0.0103550245044443 1 3.44510857478823 21.1474882238659 0.271323104987850 0.0589219466439438 AT5G05480_at 4.94162761389644 5.85250821678694 5.29562366300521 5.46631237869303 6.90996875775416 6.84694889299403 4.97563325437891 5.23385446524023 5.43489897499798 5.23718490573321 5.72036348048857 5.89723172291867 5.4307160002549 5.75629445129291 5.58645120104448 6.04788592011528 5.60428606587739 5.71338992812809 5.56704097085027 0.224494485732749 0.226511726080853 0.240188858971648 0.231201706785597 0.22968707264726 0.235396409403300 0.222629182977718 0.222560467832003 0.234676320449768 0.228767589644103 0.222560467832003 0.222560467832003 0.228381444660855 0.228359848229545 0.225535150919833 0.223408715950392 0.226386972045982 0.222560467832003 0.230454884777334 5 5 - 1622384 1622754 1622555.182 1622173 1624271 - gene protein_coding_gene TRUE TRUE AT5G05480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14920.1); similar to Os05g0395000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055461.1); similar to Peptide-N4-(N-acetyl-beta-glucosaminyl)aspara (GB:P81898) -0.403310424335936 -3.10991964818504 0.0103702422569516 1 3.44380557577240 11.2566191370730 -0.403310424335936 0.166841911404315 AT5G62810_at 9.78782502667008 9.81219713144624 10.5066625186637 10.5163160019310 10.4540277137911 10.3424150283914 10.0098352118990 10.1173213515245 9.90129390109264 9.86871358958399 10.1838174898829 10.0221706679645 10.2098408370327 10.0652195920552 9.94282318121763 10.271913436894 10.2602256390120 10.2655448595482 9.8291223238856 0.0804540838883483 0.0807548333419025 0.0787797002849986 0.0808741514265404 0.0809230073064542 0.082224627957803 0.0820404047059495 0.0804132784361442 0.0885393648232968 0.0857098420117403 0.0816804439630662 0.080357256966225 0.081033187411167 0.0845434868334602 0.0831044655896665 0.0789821367981748 0.0833101686863741 0.082561701883616 0.083820414049253 5 0|5 /|+ 25240215 25240645 25240483 25237373 25241015 + gene protein_coding_gene TRUE TRUE AT5G62810.1 PEX14 (PEROXISOME DEFECTIVE 2) mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2) similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G62800.1); similar to Os05g0101200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054378.1); similar to PEX14 -like [Oryza sativa (japonica cultivar-group)] (GB:BAD44846.1); contains InterPro domain Peroxisomal membrane anchor protein (Pex14p); (InterPro:IPR006785) -0.251813734294142 -3.10558997716612 0.0104491592588041 1 3.43707899235384 20.2028605319421 -0.251813734294142 0.027196492110542 AT5G12280_at 1.07291680318373 1.46147211122226 1.89156690338275 2.04788228498467 1.53456816859870 1.65912465107388 1.36536781774900 1.63924761919375 1.11713354935768 1.46796693883807 1.85490200669227 1.87595086012343 2.20506280021371 1.66654935961905 1.38771692204845 1.71940718614 1.63794619196535 1.53736161325266 1.35827679028100 0.219866494909700 0.206273504972561 0.212465060681892 0.200937070195129 0.204803574428406 0.2056820818021 0.209521927910638 0.205291317212376 0.201287912179015 0.204527722489698 0.200573331868315 0.207288291692921 0.214966406039930 0.217107564606685 0.202184134730885 0.203646292153294 0.205125766120475 0.210549957046703 0.205796431942825 5 5 - 3972117 3972619 3972395.636 3972015 3973637 - gene protein_coding_gene TRUE TRUE AT5G12280.1 RNA binding similar to SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G14650.1); similar to Chain A, Solution Structure Of Ubiquitin-Like Domain In Splicing Factor Aal91182 (GB:1WE6); contains InterPro domain SWAP/Surp; (InterPro:IPR000061); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.299533020468498 3.10504673911955 0.0104591038385919 1 3.43623496750673 3.10905390008982 0.299533020468498 0.0892422261481839 AT5G43870_at 6.08691143927731 6.25807114451416 6.90990896510964 6.83563177391103 7.91021810578988 7.25727077894125 7.61898058417511 7.29748787045818 6.98671093819798 7.05586987626077 8.11784348723354 8.2048931879132 8.39652191776972 8.0347747773219 7.68294349684074 7.85786736139431 7.61559590700118 7.87691535244462 7.15475475462727 0.170101397483818 0.164242890794824 0.173814424977243 0.173313799430575 0.166004434026908 0.173760401772724 0.163915837148512 0.163712660051168 0.170519636919803 0.170087165711632 0.166000110451425 0.162220391618930 0.166295845256087 0.172426911389818 0.169325370346293 0.161193182909707 0.165300441302812 0.160638245098338 0.172084928417951 5 5|0 -|/ 17649780 17651313 17650467.2 17649573 17653138 - gene protein_coding_gene TRUE TRUE AT5G43870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14740.2); similar to Protein of unknown function DUF828, plant [Medicago truncatula] (GB:ABE80297.1); contains InterPro domain Pleckstrin-like, plant; (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant; (InterPro:IPR008546) -0.349669796094665 -3.10451302394703 0.0104688834512043 1 3.4354057276462 14.5414090622814 -0.349669796094665 0.130022744485411 AT5G28140_at 2.4133808135613 2.29889091502672 2.34267032009331 2.77789172674437 1.84795901556681 2.30966316391718 2.32490650519876 2.23296078697073 2.57454625119858 2.44293445108934 2.59926273787745 2.30043752958645 2.5677824213008 2.44540127387419 2.53703370773023 1.87730505897594 2.61986693000867 2.04588651197549 2.57243767341788 0.173959304617846 0.170123096005284 0.179835030313079 0.177297765082798 0.176971150789667 0.173379923833011 0.175980515963218 0.172596929730727 0.179108618247124 0.183410594701189 0.176226786150658 0.173129446407429 0.172121219990547 0.179437881866616 0.182705456651204 0.170123096005284 0.177698700757500 0.178055297409053 0.174690506308882 5 0|5 /|- 10115300 10116446 10115868.556 10115253 10116616 - gene protein_coding_gene TRUE TRUE AT5G28140.1 unknown protein -0.326968762206791 -3.10386416792812 0.0104807853724539 1 3.43439757787836 4.77058781254394 -0.326968762206791 0.112705009638101 AT5G22380_at 1.33375599273415 1.26250375033406 2.52275064982142 2.39191349261838 1.54234034178326 1.58454574823217 0.800986981185952 0.612228684016819 2.10612155636437 1.13002555335270 0.795413756819288 1.13781450495008 1.32041352435516 0.79776711695721 1.42675567551650 0.875540891093582 1.06732576570445 1.35532410366246 0.966977650748997 0.184720395694425 0.189259648662073 0.193713259698119 0.194149001181967 0.187608338727270 0.182514515106423 0.198667299476083 0.186428146462557 0.192825934837679 0.194288487192797 0.183702323701428 0.182514515106423 0.192596137782357 0.188487169279828 0.188143644540058 0.182988562111232 0.190229067556475 0.184431542630284 0.190212681949313 5 5|0 -|/ 7408929 7409905 7409380.667 7408780 7410105 - gene protein_coding_gene TRUE TRUE AT5G22380.1 ANAC090 (Arabidopsis NAC domain containing protein 90); transcription factor Identical to NAC domain-containing protein 90 (ANAC090) [Arabidopsis Thaliana] (GB:Q9FMR3); similar to ANAC061 (Arabidopsis NAC domain containing protein 61), transcription factor [Arabidopsis thaliana] (TAIR:AT3G44350.1); similar to NAC-domain protein [Nicotiana tabacum] (GB:BAA78417.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.259111026935462 3.1036634209348 0.0104844704430811 1 3.43408566727719 2.75542120719296 0.259111026935462 0.042250237320919 AT5G03640_at 1.53267196778694 1.38107360640978 1.34989573254181 1.46967455037379 1.96573903163601 1.70621602199212 1.61694960313363 1.74187292298352 1.68084294294466 1.79283695702284 1.1725084300119 1.09020754921185 1.44052842070539 1.12381453521835 1.15699468532094 1.62670142940018 2.18297980353516 1.62260682499516 1.90761104653046 0.194093174812483 0.194093174812483 0.195663925583275 0.198783621198701 0.194093174812483 0.196890440826254 0.197746997886284 0.199485724063393 0.20447068465848 0.194480700539626 0.199219551243947 0.197672635664531 0.195327464557173 0.194274800999952 0.194093174812483 0.194093174812483 0.195355594121364 0.197916535099263 0.196507213656952 5 5 + 930193 930674 930414.818 927914 930780 + gene protein_coding_gene TRUE TRUE AT5G03640.1 protein kinase family protein similar to KIPK (KCBP-INTERACTING PROTEIN KINASE), kinase [Arabidopsis thaliana] (TAIR:AT3G52890.2); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G36350.1); similar to protein kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98253.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.271372184677143 -3.10127757703009 0.0105283677471261 1 3.43037854984877 3.20591485892346 -0.271372184677143 0.0600195530776418 AT5G47490_at 4.17185145582842 4.06717398794841 3.90650206774747 4.05841512871194 4.43742054716381 4.48024179451487 3.42612467573943 4.35750275825895 3.95106562952298 3.62060426698629 4.10952998936554 4.32017029867842 3.84953723330819 4.2542661489554 4.28267910365736 3.96619605783737 3.62559271336112 4.16723814737334 3.25923076229443 0.209452039584451 0.209312392291097 0.217085531218060 0.209275267450824 0.210717397460401 0.214226256989271 0.215269413412114 0.212288362639643 0.215564881261465 0.208817470349159 0.208354863284551 0.210376461565421 0.208896334358636 0.210898201105977 0.207481005016690 0.210678542726128 0.213305984679052 0.210920617149876 0.212062304962154 5 5 + 19286875 19287645 19287275.909 19281902 19288027 + gene protein_coding_gene TRUE TRUE AT5G47490.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47480.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain RGPR-RELATED (PTHR13402); contains domain SIMILARITY TO UNKNOWN PROTEIN (PTHR13402:SF8) -0.398448362874619 -3.09983765896053 0.0105549511496573 1 3.42814110914753 7.95425476757332 -0.398448362874619 0.164477851498212 AT5G15270_at 6.62520520943324 6.50667666897245 6.72287986744031 6.77942234889496 7.66788040015516 6.46975806297176 6.5337529749138 6.57870781734585 5.82134071756822 5.63300038509996 6.55221287309875 6.86818933946991 6.53050182308816 6.6530539547433 6.47886555524883 6.51886027643195 6.18906014029239 6.14191367469643 5.59656511541604 0.246535631925085 0.246535631925085 0.257500699027584 0.249276388041093 0.247073164911821 0.249700672199381 0.259891125509241 0.255518435986368 0.258443306773843 0.256674680886628 0.246535631925085 0.257586833869319 0.246535631925085 0.264968818853939 0.246535631925085 0.246535631925085 0.259996522994 0.246535631925085 0.246535631925085 5 5|0 +|/ 4960139 4960711 4960450.143 4958340 4962014 + gene protein_coding_gene TRUE TRUE AT5G15270.1|AT5G15270.2 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE82473.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) -0.467628163105442 -3.0993106357979 0.0105646979445566 1 3.42732216671647 12.8231442240968 -0.467628163105442 0.20872746639876 AT5G26600_at 6.90601892691255 7.2158499541305 7.9444920658178 7.8094281358254 7.54146101462718 7.41389121909866 6.65250553407043 6.83817290621427 6.51206905089352 6.51435331474506 6.9892891975404 7.35334993507295 7.35485761596752 7.3832723174382 6.81863240038752 7.41760623989168 7.35983015177379 7.56060337242219 6.66032011406801 0.166900008486364 0.158217271446901 0.161533690204178 0.157700506206180 0.159478553672821 0.163054126223631 0.159819340696257 0.157453022860353 0.172286222045316 0.155111371712683 0.151409139054360 0.154373983235896 0.157063938037894 0.156474766573593 0.157520492377803 0.152773189807485 0.164132426270502 0.158507065203894 0.159093081790025 5 5 + 9378302 9378853 9378563.818 9377405 9379800 + gene protein_coding_gene TRUE TRUE AT5G26600.1|AT5G26600.2 transaminase similar to epimerase-related [Arabidopsis thaliana] (TAIR:AT3G62130.1); similar to Putative isopenicillin N epimerase, identical [Solanum demissum] (GB:AAT39966.1); contains InterPro domain Aminotransferase, class V; (InterPro:IPR000192) -0.279922453653334 -3.09824795135358 0.0105843790857712 1 3.42567082874189 14.2111912931108 -0.279922453653334 0.0702917191300683 AT5G59250_at 9.09147083722579 9.157765850647 9.05410390745725 9.11146701414275 9.791650891631 9.20622546049895 9.68133004253015 9.4996468876072 9.53300756518792 9.56084012847563 10.5594569240401 10.4285739591067 10.1516620964439 10.4817660769343 10.5022167283435 10.2435174252909 9.8015164913881 10.3492928980355 9.33924145104833 0.0934141771350934 0.0863305290765331 0.0931566334015542 0.0890642811935696 0.0863305290765331 0.0923942641658724 0.0906621007083707 0.0888930520228502 0.0930267179222088 0.0945160843083908 0.0885639939200903 0.0886872115972232 0.088164415289225 0.0907250148600016 0.0908104624570644 0.0863305290765331 0.0958605128013966 0.097394203532898 0.0942616440944468 5 0|5 /|+ 23923425 23923981 23923696.714 23921118 23924203 + gene protein_coding_gene TRUE TRUE AT5G59250.1 sugar transporter family protein Identical to D-xylose-proton symporter-like 3 [Arabidopsis Thaliana] (GB:Q0WWW9;GB:Q9FIF2); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT5G17010.3); similar to putative sugar transporter [Nicotiana langsdorffii x Nicotiana sanderae] (GB:ABB17074.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.319335377042551 -3.09642361717355 0.0106182529797063 1 3.42283584589217 19.2204309647268 -0.319335377042551 0.107156652250125 AT5G26830_at 7.44462267302888 7.48346557585665 8.2354602912891 8.29639934473356 8.37699421412509 7.99792828498328 7.2572366172782 7.27377166456969 6.5319442736893 6.80313804182552 8.54173180384924 8.40478956749791 8.34174683786571 8.18822765504998 8.58056829650199 8.46949364309515 8.1429794174647 7.64596515897169 6.67136314674574 0.134306656492838 0.130528628911490 0.135616438686378 0.137307727745699 0.138060945009922 0.133264831002955 0.136513477932490 0.129493193844371 0.151938302270269 0.142270456042867 0.132247762787543 0.135927501035668 0.129493193844371 0.139528807547457 0.135724649051295 0.134857014604563 0.14143867268809 0.137269836334207 0.140231239388517 5 5 + 9440826 9441544 9441170.182 9437300 9441782 + gene protein_coding_gene TRUE TRUE AT5G26830.1 threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) Identical to Threonyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) (THRRS) [Arabidopsis Thaliana] (GB:O04630;GB:O81907;GB:Q84TG4;GB:Q94AG0); similar to threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative [Arabidopsis thaliana] (TAIR:AT2G04842.1); similar to threonyl-tRNA synthetase [Dictyostelium discoideum AX4] (GB:XP_636821.1); similar to threonyl-tRNA synthetase [Aedes aegypti] (GB:EAT47704.1); similar to threonyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:CAC79651.1); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain TGS; (InterPro:IPR004095); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain Threonyl/alanyl tRNA synthetase, SAD; (InterPro:IPR012947); contains InterPro domain Threonyl-tRNA synthetase, class IIa; (InterPro:IPR002320); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain TGS-like; (InterPro:IPR012676); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195) 0.276560742150590 3.09513481937926 0.0106422494485842 1 3.42083300598708 15.274861309045 0.276560742150590 0.0668418404207228 AT5G13030_at 9.21126783756542 9.18325485825956 9.96734611117875 9.98412026015645 9.67575469192655 9.54260585883753 9.14730804992734 9.2731121787215 7.72279400154685 7.3815667296243 8.56062968521771 8.56295781057685 9.12835408593325 8.93715652472847 8.99838917630982 8.91086793134411 9.03532200951573 8.90838976047218 6.98533085953828 0.155709831708489 0.154580234481916 0.158078408657489 0.156204964957651 0.154543973792427 0.159543994093603 0.154240601891439 0.153103960792319 0.176475159773646 0.171904911039994 0.155701142149333 0.150172807754208 0.151466812024919 0.156360594509577 0.154384764177162 0.152041009797113 0.156011965641634 0.154162895972476 0.176723349410662 5 5|0 +|/ 4133527 4136412 4135123.19 4133219 4136691 + gene protein_coding_gene TRUE TRUE AT5G13030.1 similar to Os06g0320700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057514.1); similar to hypothetical protein ebA6654 [Azoarcus sp. EbN1] (GB:YP_160826.1); contains InterPro domain Protein of unknown function UPF0061; (InterPro:IPR003846) 0.252891585340942 3.09257135306187 0.0106901430718357 1 3.41684911041146 17.619840682446 0.252891585340942 0.0321999765895298 AT5G01400_at 7.29178931026287 7.06286692857348 7.9276342613714 7.68442607771833 7.82507493792647 7.73912624760582 6.81083421308104 6.91581726821744 6.97444963287043 6.81374282331166 7.46176974806087 7.46823420045595 7.60598815209205 7.37740081406193 7.38761733328875 7.67997818209284 7.94928875768145 7.2100432385026 6.67284107703765 0.118609589945499 0.122795299144795 0.117535715370738 0.120638656615518 0.122832428418556 0.123121586571490 0.125666727516320 0.124084199978958 0.127337863947650 0.122494594241609 0.128806755460888 0.121303439954716 0.127327491451790 0.129667825790266 0.123475528324902 0.129031124868235 0.125158829985809 0.124686890258498 0.120305648157903 5 5 - 162921 163375 163162.455 162549 171071 - gene protein_coding_gene TRUE TRUE AT5G01400.1 ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27595.1); similar to Os07g0693900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060734.1); similar to MGC53503 protein [Xenopus laevis] (GB:AAH47265.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.272533438591945 -3.09250189491265 0.0106914438084947 1 3.41674116197625 14.576138437771 -0.272533438591945 0.0623871775787985 AT5G55200_at 5.47594709207323 5.75098135085396 7.32212515263461 7.62203146846982 6.4268720856827 6.64233389599617 6.14620311386786 6.40380646853202 4.72841874126222 5.23361745282928 6.44858392532444 6.7530973760037 6.54138351011979 6.5270779326543 6.62256106975423 6.82443676365337 7.0173638158132 6.58770854615379 5.17045429202181 0.166319966922794 0.157475280108215 0.160961970662236 0.159794591165235 0.160129628425861 0.167696939671683 0.160613036263488 0.165021596854836 0.180145266606812 0.166413435193337 0.163156558096837 0.160102824181218 0.160319628227622 0.164135520390715 0.167688511309779 0.158572681527108 0.176040833415988 0.161028221106896 0.172481490594078 5 5 + 22412645 22413537 22413184.818 22411833 22413798 + gene protein_coding_gene TRUE TRUE AT5G55200.1 co-chaperone grpE protein, putative similar to AR192, adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization [Arabidopsis thaliana] (TAIR:AT4G26780.1); similar to chaperone GrpE type 2 [Nicotiana tabacum] (GB:AAC72387.1); contains InterPro domain GrpE protein, head; (InterPro:IPR009012); contains InterPro domain GrpE protein; (InterPro:IPR000740) 0.300420198411551 3.09094718382123 0.0107206008209959 1 3.41432486290976 12.3285076349166 0.300420198411551 0.0913051431686609 AT5G12120_at 8.79155218269103 8.72403499304968 9.09584978565186 9.33613264202125 9.27978382353528 9.38855257537937 8.50569130966015 8.44157002935474 8.70152371218705 8.63427438500348 8.93649940196739 9.12076394788771 9.09365383784132 9.01220934134491 9.05025843791064 9.14683562801177 9.15664065865594 9.13232768827467 8.74380211168076 0.0950638378951452 0.0924848252945708 0.0961605198054314 0.0969537669518502 0.0991988718005801 0.097863692059715 0.096902499139906 0.0954097101548165 0.104971427808787 0.096984917217927 0.101301725548267 0.098116902951626 0.099702328269998 0.103123378593424 0.100096916105094 0.0932667698093276 0.0994573852381589 0.0924848252945708 0.0942208810058216 5 5 - 3916278 3916771 3916557 3916049 3918660 - gene protein_coding_gene TRUE TRUE AT5G12120.1 ubiquitin-associated (UBA)/TS-N domain-containing protein similar to ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G26920.1); similar to Calcium-binding EF-hand; UBA-like [Medicago truncatula] (GB:ABE81075.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) -0.261884136946646 -3.09046601153007 0.0107296410568368 1 3.41357701825246 17.8325702613482 -0.261884136946646 0.0484047852470978 AT5G20940_at 3.45860534670728 2.75531144173909 3.63608061474447 3.16327399628627 3.23992982305241 3.26473749094773 3.1407126067085 2.56024706456528 3.57972618532409 3.35730772696937 3.60958850097467 3.03162815501235 2.88182198273091 3.5773582937384 3.38568338340941 3.32094733951088 3.25106220142201 3.4128477657708 3.42975851841439 0.227301699648618 0.231498633348520 0.221654977988378 0.236109011180272 0.224644559826607 0.235359379087195 0.230125392089836 0.230249151236051 0.230679015909928 0.237435822404474 0.225570594537212 0.222689482229232 0.225168308060226 0.219839783101230 0.222830682712522 0.219839783101230 0.229456831468598 0.227294919511066 0.227861176944919 5 0|5 /|- 7104124 7104519 7104352.8 7103929 7106703 - gene protein_coding_gene TRUE TRUE AT5G20940.1 glycosyl hydrolase family 3 protein similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G20950.2); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT3G62710.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT5G04885.1); similar to beta-D-glucan exohydrolase [Nicotiana tabacum] (GB:BAA33065.1); similar to beta-D-glucosidase [Tropaeolum majus] (GB:CAA07070.1); similar to beta-D-glucosidase [Gossypium hirsutum] (GB:AAQ17461.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) -0.417383243492622 -3.08982692094063 0.010741660215059 1 3.41258372251421 6.53459463795578 -0.417383243492622 0.177810958063694 AT5G58170_at 1.86213188564312 1.62902869616372 1.99560774210482 1.94777625105449 1.5395146660205 1.64080289023515 1.53328570302151 1.88051420055061 2.56567238667531 1.80588568997967 1.84588584992788 1.79080736945746 1.57045648433012 1.84607561162541 1.92705378651119 1.5831692233701 2.09300040882648 1.67822137699547 1.98262356385625 0.225010234747651 0.230613246074393 0.225335617328284 0.227916389692472 0.228055339376000 0.232544619372348 0.227044064224388 0.228779790089142 0.232701158137965 0.228724788079305 0.228916389267571 0.230219705111716 0.230610978140772 0.227109377827093 0.229595467793871 0.228935034576518 0.228583593702789 0.240396348115903 0.227821947445784 5 5 - 23557521 23558143 23557843.091 23557275 23560571 - gene protein_coding_gene TRUE TRUE AT5G58170.1 glycerophosphoryl diester phosphodiesterase family protein similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT5G58050.1); similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66970.1); similar to MRH5/SHV3 (morphogenesis of root hair 5), glycerophosphodiester phosphodiesterase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26690.1); similar to Os02g0187400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046128.1); similar to putative glycerophosphoryl diester phosphodiesterase family protein [Nicotiana tabacum] (GB:BAE53680.1); similar to glycerophosphoryl diester phosphodiesterase 2 precursor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15424.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) -0.283112176542506 -3.08584088783554 0.0108169331518064 1 3.40638818500218 3.70852990970804 -0.283112176542506 0.0749252517606796 AT5G54000_at 0.985021612028106 1.10929653515179 0.970914635184745 1.23271441316986 1.21337472523448 1.14176607441847 1.28054078499296 1.24766915575689 1.7656025878965 1.911882309119 1.42210263845042 1.50762481487193 1.89749087221470 1.33826909581634 1.59890998525227 1.4893948966522 1.83265019427078 1.71235198508104 2.05764946830604 0.187167563950543 0.184489131011484 0.184489131011484 0.189045333922743 0.188699409636109 0.184489131011484 0.189266733507338 0.187396739423575 0.190055256583561 0.190615616973078 0.185341747648482 0.193489252065417 0.187772344648178 0.187680718508504 0.187009775450629 0.186213865097551 0.189977357173962 0.188943376288375 0.185005919817308 5 5 - 21935010 21935737 21935373.818 21935002 21936290 - gene protein_coding_gene TRUE TRUE AT5G54000.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT5G20400.1); similar to ethylene-forming-enzyme-like dioxygenase [Prunus armeniaca] (GB:AAB88878.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.263942538862088 -3.08581046766203 0.0108175096648991 1 3.40634090051698 2.90344262470886 -0.263942538862088 0.0519716673673506 AT5G04430_at 9.29742042689173 9.31477622295102 9.51530235699146 9.59035760192826 9.92953936380888 9.8417865013534 9.93865754360017 9.92759008306318 9.63053947495536 9.35158624342425 10.3483147959937 10.4837365125358 10.1097865555899 10.1790033567343 10.5887074762001 10.1320835521895 9.95293601116974 10.1429962615774 9.39524450361705 0.0812333433087386 0.079005343347513 0.080678849142863 0.081713041741119 0.0822589242726943 0.0793598139636407 0.083011683766999 0.0828669540835324 0.0836223119317282 0.0828173394948271 0.078450720522061 0.0788997620398335 0.078450720522061 0.082845424566052 0.0810828681523217 0.080568413405976 0.0832067841872721 0.0809217454263755 0.0843063062423484 5 5|0 -|/ 1250604 1252721 1251759.2 1250252 1253866 - gene protein_coding_gene TRUE TRUE AT5G04430.1|AT5G04430.2 KH domain-containing protein NOVA, putative similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G33680.1); similar to Os02g0822300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048558.1); similar to transcribed sequence 1087 [Zea mays] (GB:CAA54960.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) -0.247809940382708 -3.08541327858464 0.0108250399228964 1 3.40572351523845 19.520088248864 -0.247809940382708 0.0202980410406849 AT5G52390_at 4.49646446406767 3.95145298272759 3.66099484559415 4.51916995557382 4.24040360596400 3.57942738110131 1.15878096397161 1.08996495576987 1.08498201983700 1.41569134733587 1.03582922861474 0.841544508884862 1.90266272900606 1.26310182085674 1.22356595764075 1.54113045454246 1.29257516530449 1.20700546374650 1.16644661246326 0.263486163514194 0.263150802302096 0.288998049224565 0.272017530836547 0.264566424794364 0.254774065693837 0.249248891382166 0.252422559590361 0.255531233906557 0.249248891382166 0.250835962800526 0.250527960326565 0.253000282566399 0.249248891382166 0.249248891382166 0.255908115320665 0.24980490336859 0.256971673731922 0.249583348172645 5 5 - 21281525 21282341 21281855.909 21281162 21282490 - gene protein_coding_gene TRUE TRUE AT5G52390.1 photoassimilate-responsive protein, putative similar to photoassimilate-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G54040.1); similar to PAR-1c [Nicotiana tabacum] (GB:CAA58732.1); contains InterPro domain PAR1; (InterPro:IPR009489) 0.467206237994651 3.08095319918817 0.0109099640688699 1 3.39879047039878 4.59248251565623 0.467206237994651 0.210183224511082 AT5G63030_at 9.41490705229494 9.6433933782913 10.0909609708556 10.2704175543765 10.2647542719279 10.0182353302058 9.19126978787084 9.40187290507488 9.2599251815129 9.40014962333905 9.6918617362757 9.19818449603245 9.57380418410795 9.5552702297836 8.92172460730056 9.46724671056663 9.38578783320319 9.55889222589339 9.29188637599697 0.124801011289791 0.122639982394193 0.123961267596753 0.118882153001675 0.124246872011588 0.122509723261211 0.125405150091518 0.121995958548596 0.135918207581406 0.118882153001675 0.12808084256248 0.120217422046745 0.118882153001675 0.129184235707066 0.131061551611838 0.118882153001675 0.122961624837704 0.127331560650059 0.120351057010293 5 5|0 +|/ 25303622 25304711 25304343.1 25303449 25304920 + gene protein_coding_gene TRUE TRUE AT5G63030.1 glutaredoxin, putative Identical to Glutaredoxin-C1 (AtGrxC1) (GRXC1) [Arabidopsis Thaliana] (GB:Q8L8T2;GB:Q8RXH1;GB:Q9FM49); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G40370.1); similar to Glutaredoxin, eukaryotic and viruses [Medicago truncatula] (GB:ABE93578.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.282926775424423 -3.07950696318508 0.0109376466454523 1 3.39654220511532 19.1551848546181 -0.282926775424423 0.0753406011475983 AT5G26360_at 7.3255910328788 7.56855485777754 7.94551929909473 8.01331445786954 8.24249578401622 7.8043458327525 7.36220468602424 7.19691046167701 5.62673532272761 6.57832831454337 8.43272696610498 8.78230499334752 8.36986544925018 8.30810119253382 8.42298047754161 8.32832759647268 8.19927352756551 7.44211907430048 6.8760928709814 0.171130183272999 0.171130183272999 0.176198330161996 0.175991489707705 0.180613350144242 0.174180081471744 0.176183416640403 0.175222023220226 0.191402758263867 0.212168333761766 0.171130183272999 0.17483423523347 0.172772457849181 0.175630133365566 0.172498014492681 0.178490254831964 0.184272968964624 0.191940223008997 0.195235063049961 5 5 - 9255566 9256552 9256014.091 9255056 9258994 - gene protein_coding_gene TRUE TRUE AT5G26360.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G11830.1); similar to PREDICTED: similar to Chaperonin containing TCP1, subunit 3 (gamma) isoform 1 [Strongylocentrotus purpuratus] (GB:XP_780013.2); similar to Chaperonin complex component, TCP-1 zeta subunit (CCT6) (ISS) [Ostreococcus tauri] (GB:CAL56638.1); similar to CCT chaperonin gamma subunit [Physarum polycephalum] (GB:AAL35373.1); contains InterPro domain T-complex protein 1, gamma subunit; (InterPro:IPR012719); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) 0.300011548974669 3.07835304385671 0.0109597850505584 1 3.39474831621245 15.0054160077065 0.300011548974669 0.0920490045524518 AT5G15020_at 4.68654257357346 4.59735836046631 5.85384786874009 5.6345667504059 6.7050461832044 5.79161536442994 4.44583697326088 4.71894517299517 3.95834819603666 4.25188276744171 6.03201347416625 5.64628383116094 6.22911204216277 5.49071975136079 5.45089454907095 6.35072806008998 5.14824919307834 5.68466982189955 5.07126794997941 0.262883674714259 0.255300249657935 0.253473693880902 0.253898315998727 0.255222746812978 0.253814948567657 0.250880524283657 0.251613144523672 0.267752834008540 0.27227327786736 0.257568555909185 0.254696622674117 0.258211598119771 0.266375556429959 0.249985414238652 0.259501414500919 0.261073028840159 0.262783989684444 0.253386220618405 5 5|0 -|/ 4859414 4860162 4859798.333 4859141 4866034 - gene protein_coding_gene TRUE TRUE AT5G15020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01320.1); similar to paired amphipathic helix repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70060.1); similar to ATSIN3/SIN3 (Arabidopsis thaliana sin3 homolog) [Arabidopsis thaliana] (TAIR:AT1G24190.1); similar to transcriptional repressor protein-related [Musa balbisiana] (GB:ABF70137.1); similar to paired amphipathic helix repeat-containing protein / transcription regulator-related [Musa acuminata] (GB:ABF70056.1); similar to Paired amphipathic helix [Medicago truncatula] (GB:ABE86951.1); contains InterPro domain Histone deacetylase interacting; (InterPro:IPR013194); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) 0.403512382617105 3.07495783666406 0.0110251874249773 1 3.38946986363888 10.3948449783143 0.403512382617105 0.169997647004296 AT5G37040_at 2.56269822571042 2.58761465142312 2.95558361561087 3.29084220787236 2.43791531577607 2.80188104229932 2.3817025851686 2.96341633669268 3.07382390218542 2.86436277305313 2.4504760195649 3.27544425204358 2.98598932698965 2.64771166116605 2.86908383382442 3.07838256407602 3.0803284284257 3.49510299500686 3.44973154434496 0.216950351429404 0.216950351429404 0.221499418165977 0.22612835014724 0.222131046279964 0.225214483662298 0.218837708818251 0.223747871084926 0.223269923676117 0.227592295617677 0.216950351429404 0.217171428383818 0.22020041482701 0.220356187245169 0.227993373746738 0.219086866139334 0.221448547271794 0.225833985824235 0.221423669222377 5 5|0 +|/ 14656511 14657119 14656808 14656365 14657164 + gene protein_coding_gene TRUE TRUE AT5G37040.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G58090.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) -0.349247503695851 -3.07430488972919 0.0110378105490681 1 3.38845469998739 5.805017226735 -0.349247503695851 0.132234724066947 AT5G49810_at 8.9560599967141 9.1543747845019 9.76151451164708 9.78465154996892 9.54771392318658 9.15854607461114 9.53236504201629 9.57783124489353 8.92068931703515 8.90888716612618 9.46012392170694 9.3555307065772 9.45756599117497 9.59060672592052 9.24848003191724 9.57145584781485 9.36549972844972 9.63729538741345 8.58700653327925 0.0957374272867746 0.094864795020904 0.100925322002448 0.099309796437865 0.100757068549540 0.109720037675500 0.0989953183981715 0.0976222681904314 0.100083636137279 0.0969114105436461 0.0963697360960218 0.0958564551725777 0.0955570610379268 0.0982298169499445 0.0972262426095477 0.0942346552629 0.100474344711141 0.0945549739143062 0.0992280930392296 5 5 + 20262461 20263180 20262839.273 20256569 20263606 + gene protein_coding_gene TRUE TRUE AT5G49810.1 MMT (methionine S-methyltransferase); S-adenosylmethionine-dependent methyltransferase Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation. Identical to Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S- methyltransferase) (MMT1) [Arabidopsis Thaliana] (GB:Q9LTB2;GB:Q9SWR2); similar to ACS5 (ACC SYNTHASE 5), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT5G65800.1); similar to Methionine S-methyltransferase (AdoMet:Met S-methyltransferase) (GB:Q9SWR3); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE78969.1); similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE91874.1); contains InterPro domain Methyltransferase small; (InterPro:IPR007848); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) -0.283049141376363 -3.07292117643053 0.01106460970879 1 3.38630333964272 18.5673058733268 -0.283049141376363 0.0761013403472226 AT5G20280_at 10.1333793588456 10.4480644640567 11.1225756059249 11.3706312747038 11.1627610505565 10.9297234477745 10.5004538515801 10.2901353970773 8.94178789387822 9.58751790247553 10.1855534838425 10.0927145267533 10.1738074172547 10.0507557938643 9.96277763572635 10.3386850428394 10.8110757129451 10.6804496681383 9.11049369120836 0.118683382217990 0.115758675105526 0.117580928301848 0.121133161402818 0.118842703532847 0.11934107656647 0.119308576387836 0.118790322720167 0.140196180170515 0.123479473607209 0.123603188922459 0.115758675105526 0.116949931196038 0.125860817820112 0.123102894296090 0.116488948671158 0.119460998921519 0.119407299609327 0.13161603531174 5 5|0 -|/ 6845021 6845733 6845384.444 6844716 6850156 - gene protein_coding_gene TRUE TRUE AT5G20280.1 ATSPS1F (sucrose phosphate synthase 1F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups Encodes a protein with putative sucrose-phosphate synthase activity. similar to ATSPS3F (sucrose phosphate synthase 3F), sucrose-phosphate synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G04920.1); similar to ATSPS2F (sucrose phosphate synthase 2F), sucrose-phosphate synthase [Arabidopsis thaliana] (TAIR:AT5G11110.1); similar to ATSPS4F [Arabidopsis thaliana] (TAIR:AT4G10120.2); similar to sucrose-6-phosphate synthase A [Nicotiana tabacum] (GB:AAF06792.1); similar to Sucrose-phosphate synthase 1 (UDP-glucose-fructose-phosphate glucosyltransferase 1) (GB:O22060); similar to sucrose phosphate synthase [Actinidia chinensis] (GB:AAL86360.1); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria; (InterPro:IPR006380); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296); contains InterPro domain Sucrose phosphate synthase, plant; (InterPro:IPR012819) 0.294948853423263 3.07031917965290 0.0111151828890345 1 3.38225766458428 20.4948375093272 0.294948853423263 0.0880878339033377 AT5G11500_at 10.9762737443665 11.0408699864151 11.7584007016077 11.7822232516407 11.7641575844685 11.6117598730062 10.7475184990874 10.6829922264664 10.6622806409712 10.3622299458707 11.3495075571259 11.1804977457043 11.2902073049949 11.1868919737425 11.1640524783994 11.3000220773730 11.2383563411130 11.1325595934077 10.3193179626833 0.0823538355730354 0.0803523519558682 0.0813612278016774 0.0824657204638022 0.0834279878096624 0.0845187463991643 0.0832416360693754 0.0821934842795432 0.094207972416941 0.0817849544987776 0.0823930211869782 0.0801780478842686 0.0808414531432358 0.0827255908606668 0.0819535089024536 0.0817681219938297 0.0873660102178207 0.0837021923403982 0.0816495351098927 5 5|0 +|/ 3676830 3678231 3677929.571 3676580 3679353 + gene protein_coding_gene TRUE TRUE AT5G11500.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07560.1); contains InterPro domain Protein of unknown function DUF814; (InterPro:IPR008532) 0.250438737941433 3.06905841306844 0.0111397717594434 1 3.38029730643623 22.1346268502945 0.250438737941433 0.0310192414656118 AT5G19530_at 7.37639618884676 7.32429287630516 7.20342004344417 7.37178859638308 7.957167372976 7.83482537611659 7.33230531166001 7.40201457723054 7.29875266742708 6.31315068183317 7.66527996065513 8.00111414487862 7.81558414564616 8.11481621553269 8.46256016846332 7.68369180526545 8.31396126094513 7.5853797146433 6.51344363225058 0.217551900613725 0.212265663917963 0.211553728785230 0.201825212665210 0.208955979868059 0.223003498652277 0.203322043753231 0.203732337590522 0.214194417586982 0.223706399133692 0.205411279606369 0.207175574039498 0.204393915162863 0.218003493807806 0.207385639797503 0.203122494103801 0.205218877701097 0.208276903210847 0.223567956249970 5 5|0 -|/ 6589180 6589881 6589568.556 6588960 6591365 - gene protein_coding_gene TRUE TRUE AT5G19530.1|AT5G19530.2 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. similar to SPDS1 (SPERMIDINE SYNTHASE 1) [Arabidopsis thaliana] (TAIR:AT1G23820.1); similar to spermine synthase [Arabis gemmifera] (GB:BAB83654.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) -0.254288167482334 -3.06768955149168 0.0111665312721807 1 3.37816881764124 14.8071500032906 -0.254288167482334 0.0390389500021737 AT5G55290_at 9.5432202294542 9.67708807249294 10.3176310507423 10.3361576948216 10.6915344623538 10.3628184132507 9.44623400803537 9.32818900865231 9.37841423551914 9.1333047405135 10.4360339767852 10.4164157261309 10.2327081314721 10.3563147509893 10.3166630724417 10.2624229198353 9.7321410011196 10.2194669712850 9.30420426592727 0.0876326858917265 0.0841262047602684 0.086876538846228 0.085859588916906 0.0866715373836165 0.0889628808916453 0.0882649459120919 0.0873713843668998 0.0916237628159828 0.091384280293508 0.0856870412280817 0.0876881481945624 0.084990635432139 0.0880635239099977 0.0880780812085868 0.0862258211219465 0.0994780448335124 0.0858352954304467 0.0892325094129676 5 5|0 -|/ 22440269 22441277 22440847.5 22440263 22441312 - gene protein_coding_gene TRUE TRUE AT5G55290.1 ATP synthase subunit H family protein similar to ATP synthase subunit H family protein [Arabidopsis thaliana] (TAIR:AT4G26710.2); similar to similar to ATP synthase subunit H protein [Solanum lycopersicum] (GB:BAD95792.1); contains InterPro domain ATPase, V0 complex, subunit H; (InterPro:IPR008389) 0.272307617516375 3.06702538630124 0.0111795383343728 1 3.37713606463207 19.7221067338474 0.272307617516375 0.064809537374357 AT5G12010_at 7.85728730063288 8.23552179467628 8.84061633260627 8.8378790923954 9.15231617434206 8.96156568966138 8.40568671085791 8.88676672608176 8.72493580342601 8.35373672361898 9.0728837037803 8.5486341331763 8.74770822607184 9.0843426453612 8.63905625599127 8.82385659502796 8.72557966617665 8.82619920897866 8.1277747027274 0.122456746231369 0.120688883318181 0.129261700599794 0.129255399520556 0.128619741196376 0.128063770776350 0.127350013463014 0.126151237453788 0.122637852030139 0.12388086094939 0.123735471413273 0.126592052034063 0.122267041599904 0.123772880331394 0.126012918028148 0.120966981000392 0.134016263136520 0.123289617290624 0.140894290722765 5 5 - 3877996 3878488 3878285.182 3877813 3879540 - gene protein_coding_gene TRUE TRUE AT5G12010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29780.1); similar to Os01g0582600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043414.1); similar to Os05g0593000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056499.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72250.1) -0.320873902639995 -3.06681813005504 0.0111836004003992 1 3.37681378591711 17.2525457931124 -0.320873902639995 0.110929599065505 AT5G04550_at 8.10492808437783 8.69200090455743 9.30075215539128 9.47484933330355 9.60162106301349 9.3714164664754 8.53312954642338 8.45113319131688 8.20774619006422 7.84358846852366 9.63533522864223 9.62141283602964 9.54252515823647 9.26450381184741 9.15528540415538 9.45402400746438 8.75037664317596 9.45340979896937 8.27806083556282 0.199988589085729 0.182275826627422 0.193785817624698 0.183733086115442 0.180941256522815 0.181284795865592 0.183029443751552 0.191433937830227 0.193905672879187 0.184675478048138 0.177594647304181 0.17639122072546 0.179565609142239 0.188169668770698 0.190626129700884 0.177382629823757 0.188161292191476 0.182426984089929 0.185017601621942 5 5 - 1303846 1304270 1304032.818 1303181 1306117 - gene protein_coding_gene TRUE TRUE AT5G04550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23160.1); similar to Protein of unknown function DUF668 [Medicago truncatula] (GB:ABE80130.1); contains InterPro domain Protein of unknown function DUF668; (InterPro:IPR007700) 0.324678417438553 3.06569643582927 0.0112056107386242 1 3.37506955491526 17.6759326476651 0.324678417438553 0.114095647509895 AT5G58760_at 2.03241992063417 2.23321889314006 3.35776444863441 2.84482843725228 2.73552931445782 2.75679596092579 2.91380814464223 2.45931626042623 1.81036367091073 2.27007338695756 2.89152371900336 2.68293362055911 2.99469719840042 2.8076350672723 2.24868766479783 3.46323257076315 3.4221835486478 2.16034877296641 2.17496618861768 0.202331698049968 0.205358131981182 0.195656844655278 0.194895931210841 0.200414369954370 0.196908289779034 0.20102938018808 0.197676011522455 0.203626753438227 0.209747747044524 0.194584582453444 0.197305990483497 0.202727522177402 0.199599939485066 0.236773671555945 0.198136271837646 0.203651187218088 0.195254306984082 0.198026029485498 5 5|0 -|/ 23748308 23748680 23748451.5 23747726 23750924 - gene protein_coding_gene TRUE TRUE AT5G58760.1 DDB2 (DAMAGED DNA-BINDING 2); nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G80710.1); similar to UV-damaged DNA binding protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAB16450.1); similar to Os01g0141700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041985.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.336321858986789 3.06076710527018 0.0113028577698445 1 3.36740402357041 5.12623001541244 0.336321858986789 0.123638894834724 AT5G48770_at 1.92333371133715 1.82068284443301 1.85864096964588 1.72483528822146 1.65366729831395 1.93028204040218 1.80137192585394 1.7826011587219 1.96342543254691 2.34029655385037 2.19866140909506 2.14562319600391 2.16616707076576 1.98422494338949 2.21998423840771 2.30277830262830 2.30637457541281 2.15193180915583 2.67205830524031 0.240859812297523 0.251382955137384 0.254701534409866 0.259431805330141 0.257561480536223 0.244589884465356 0.247290278780406 0.240859812297523 0.24127374363191 0.243656724355183 0.241820669098974 0.248160689285789 0.245395207886832 0.246498214027042 0.253360982515306 0.248686664480991 0.240859812297523 0.240859812297523 0.249166530862501 5 5 - 19790614 19791160 19790846.636 19790503 19794468 - gene protein_coding_gene TRUE TRUE AT5G48770.1 disease resistance protein (TIR-NBS-LRR class), putative similar to ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G72840.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G40100.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G17600.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.264751423261149 -3.05968501162121 0.0113243198300241 1 3.36572118124368 4.06679104977613 -0.264751423261149 0.0561586296823333 AT5G65250_at 6.44553211729368 6.72326979146195 7.28550556113091 7.39869807972438 7.4736534398349 7.27366411999943 6.58569075236836 6.85640619469696 6.8100008619876 6.37693597562397 7.47880242219908 7.5435323521023 7.40130386787708 7.13009286048292 7.44289550397544 7.34271993300762 7.01297832045973 7.47682007360855 6.48979350668243 0.140523984340924 0.142200971897084 0.136046964634468 0.133219396874068 0.132593141337298 0.134725312232296 0.141991892776586 0.138751524572182 0.141033071126470 0.145674372583135 0.138911553040483 0.132655242372982 0.137308980329246 0.146873236338193 0.137346445612198 0.140632392907631 0.140735922183604 0.133299379514182 0.137552390411834 5 5|0 -|/ 26095932 26096950 26096579.9 26095759 26097424 - gene protein_coding_gene TRUE TRUE AT5G65250.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10714.1) -0.283545923924285 -3.0582804246639 0.0113522397816397 1 3.36353675654045 13.9615791478032 -0.283545923924285 0.0780154801985702 AT5G52500_at 1.73843248915215 1.63836347680836 2.00441649207204 1.76400851354757 1.68800786600151 1.81424531912465 2.04872091251149 2.13302595829041 2.29295180412702 2.24890506929597 1.46075148538927 1.65510641438039 2.15366993529952 1.81438400645507 1.88135392046081 1.83240803259425 2.07342474401813 1.94838909894887 1.45237944796639 0.218222930009033 0.214806996793388 0.222424809612447 0.227967705843553 0.214916940317146 0.231890597734824 0.223905780478369 0.218108141431413 0.217331330310331 0.222477336977252 0.22303130678968 0.218714117124295 0.220256784468031 0.220312170289615 0.234509218628865 0.220280555591644 0.216604976909207 0.224517740950845 0.221915793669764 5 5 + 21319301 21319864 21319575.636 21318756 21320055 + gene protein_coding_gene TRUE TRUE AT5G52500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G57400.1) -0.261004799493845 -3.04990451167511 0.0115201879870238 1 3.35050933498424 3.77890999268340 -0.261004799493845 0.0521618560965431 AT5G23800_at 1.14922825541028 1.21529314306394 1.4941439622146 1.37360389814994 1.69781320352174 1.76324936146097 1.40034642585452 1.2884873519757 1.18758918021578 1.07276690888363 1.57622398560417 1.98389527495703 0.885577185052515 1.72442201508937 1.81444182804341 1.75230856745435 1.34179067677176 1.98251882840855 1.50791609216132 0.207129260464936 0.207802834269114 0.209420918996661 0.207129260464936 0.210470595457486 0.207129260464936 0.207129260464936 0.211485408702307 0.21676584330979 0.215267844025197 0.208340627248505 0.207129260464936 0.207729731456435 0.209969674453788 0.216958640373247 0.212251981312112 0.218115340703228 0.213115319795775 0.209020880394642 5 5|0 -|/ 8022474 8022964 8022740.6 8022219 8024692 - gene protein_coding_gene TRUE TRUE AT5G23800.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23770.1); similar to Agenet domain containing protein [Brassica oleracea] (GB:ABD65016.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Protein of unknown function DUF724; (InterPro:IPR007930) 0.249474665774503 3.04803336141458 0.0115580497677477 1 3.34759879503704 2.86713971133624 0.249474665774503 0.0326925954203831 AT5G06180_at 3.8073973787224 3.67800348667124 4.39383375997428 4.21596020856356 4.32918133967968 4.50517005982187 3.77228428775191 3.55596269447858 3.59958800036016 4.02485986216984 4.24411364418144 4.24986069538511 4.07538568830454 4.48053398291874 4.21346851451995 4.18866013889465 3.78027425179775 4.64509112001296 4.12829129379296 0.170233221557402 0.171987713330012 0.170233221557402 0.174086102942884 0.189434137152026 0.173544614378586 0.181612069158271 0.173084467998301 0.173504492441588 0.177353621559636 0.171397019690514 0.175816281398129 0.171474056065481 0.176777870420109 0.173859178134405 0.170655718612244 0.177151823063070 0.170233221557402 0.176875076490858 5 5|0 +|/ 1874371 1875311 1874955.8 1873163 1876060 + gene protein_coding_gene TRUE TRUE AT5G06180.1|AT5G06180.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22350.1); similar to OSIGBa0137L20.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66474.1); similar to Protein of unknown function DUF1022 [Caulobacter sp. K31] (GB:ZP_01422054.1); similar to Os04g0414000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052751.1); contains InterPro domain Protein of unknown function DUF1022; (InterPro:IPR009367) -0.267397742583116 -3.04269950438636 0.0116666708956549 1 3.3393015791813 8.10835076359605 -0.267397742583116 0.0614645830997394 AT5G37580_at 3.25855781893486 2.87326211709487 3.13075198308573 3.1723977934254 3.31495863917481 3.18562305865112 2.88582380809304 3.02930278215525 2.93466138393332 3.03451405787819 3.01168472165188 2.88652676107936 2.94100437551551 2.89773500667544 2.94316864167775 2.98180136586014 3.48933678420375 2.96908757602485 2.66411339054973 0.215834845634215 0.210754534338884 0.225376646282836 0.215566406959483 0.219397994041875 0.214966475029228 0.22104464676134 0.218321961800422 0.219671033853610 0.213014718572188 0.212075722559879 0.226200427979136 0.222067945137166 0.222647941650659 0.216969539266199 0.211558059598669 0.215267148482920 0.212680712524209 0.213421314400007 5 5|0 -|/ 14944649 14945825 14945138.556 14944543 14946800 - gene protein_coding_gene TRUE TRUE AT5G37580.1 binding / protein binding contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.279004292166328 -3.04096556386462 0.0117022038830905 1 3.3366041486995 6.05273779918014 -0.279004292166328 0.0749350793199087 AT5G46800_at 9.88724689323142 9.9616372661808 10.3939831323623 10.4768129918326 10.4654682228219 10.3437202974851 10.7549713143208 10.8308666269479 10.238545104107 10.1676903231261 10.9162994067977 10.9063044937248 10.7763620248361 10.8918573293911 10.8332446338433 11.0918226654708 10.5598732204027 10.7070549598269 10.0105368011484 0.0843589416070713 0.0850645433684599 0.0893647521680708 0.0835228130746593 0.0854992525494489 0.089546494700185 0.082322182756847 0.0823653426112358 0.0880317783930667 0.0879207532791865 0.0833982977755627 0.0853910019279936 0.082322182756847 0.0919085217297907 0.0846177595986105 0.0832250909962744 0.0867820430465654 0.0824236294046105 0.0876132793981994 5 5 - 19006028 19006699 19006372.273 19005858 19007991 - gene protein_coding_gene TRUE TRUE AT5G46800.1 BOU (A BOUT DE SOUFFLE); binding Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein Identical to Mitochondrial carnitine/acylcarnitine carrier-like protein (Protein A BOUT DE SOUFFLE) (Carnitine/acylcarnitine translocase-like protein) (CAC-like protein) (BOU) [Arabidopsis Thaliana] (GB:Q93XM7;GB:Q9FIP5); similar to mitochondrial substrate carrier family protein (BAC1) [Arabidopsis thaliana] (TAIR:AT2G33820.1); similar to DIFferentiation abnormal family member (dif-1) [Caenorhabditis elegans] (GB:NP_501223.1); similar to Os10g0573700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065471.1); similar to Os10g0573800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065472.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.248209182716203 -3.03954414927081 0.0117314141268642 1 3.33439284815497 20.8764765521048 -0.248209182716203 0.0314261594694084 AT5G38280_at 2.00213509073116 2.10406097634444 2.68942426467277 2.60294330371066 2.54258924467847 2.58282963075136 2.07536604563167 1.85972693681897 1.68308789364218 1.98821228520313 2.23749366407499 2.00976697695673 2.43941333984263 2.25756895526515 2.16477131940092 2.48369616938147 2.36126143358585 2.64696738444818 2.27418436187794 0.195967945366331 0.196014401137513 0.200418028875217 0.192636035866930 0.194667363407321 0.199665987489276 0.191023177430010 0.192642921860240 0.197773264020465 0.192869042305906 0.204479864402345 0.190708604286908 0.203800544457394 0.190708604286908 0.192064188968582 0.191945222675889 0.208279115513989 0.190708604286908 0.193443887947486 5 5 - 15310557 15311111 15310825.818 15310351 15314553 - gene protein_coding_gene TRUE TRUE AT5G38280.1 PR5K (PR5-like receptor kinase); kinase/ transmembrane receptor protein serine/threonine kinase putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase similar to receptor serine/threonine kinase, putative [Arabidopsis thaliana] (TAIR:AT4G18250.1); similar to receptor serine/threonine kinase, putative [Arabidopsis thaliana] (TAIR:AT1G70250.1); similar to receptor serine/threonine kinase PR5K (GB:AAC49208.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.254947080094479 3.0380824910644 0.0117615283828701 1 3.33211888876374 4.46085722947272 0.254947080094479 0.0444542895471319 AT5G44410_at 4.62063091863228 5.75565131604938 5.55479432788731 6.24948969634603 6.8585977888968 6.19445299125998 6.96500622130971 7.08785368696054 6.37927710709423 6.1049595001774 7.19777189714405 7.44122255144678 7.2262753363068 7.67792443795574 6.44904221289265 7.72740629365799 6.61690068090431 7.07810977769888 6.32528707320033 0.262181939399957 0.231296179593543 0.243475700237205 0.238636652973412 0.227521095409287 0.244337965570917 0.237156685259059 0.230790319857963 0.232096855283041 0.246543686480999 0.233021416981815 0.226040722604099 0.226317394541668 0.229104566196181 0.227999750874105 0.230599951594806 0.243083495388447 0.227270660211478 0.236264038825431 5 5 - 17908515 17909039 17908814 17908449 17910205 - gene protein_coding_gene TRUE TRUE AT5G44410.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20820.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44440.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90046.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR006093) -0.539224682865282 -3.03776827820923 0.0117680122635013 1 3.33163004863041 12.8841460560802 -0.539224682865282 0.258254894929265 AT5G47250_at 4.87993499292068 4.99935802231716 4.75258470845621 5.10362524435259 3.66773637338104 3.79361596340614 3.60344147543697 3.18834141022705 3.53021796627631 3.37433078267562 3.9507837668666 4.5175171886126 4.40892287431365 4.41394951360744 4.88589410269593 4.16507413895116 3.34655121526071 4.15927422904143 3.56439548158797 0.211401466573544 0.215660485491625 0.209798174474409 0.213164910646187 0.214585844935075 0.209092849927079 0.215347012090666 0.22310064043487 0.225108712280466 0.226126352446177 0.217634191588918 0.208716460863152 0.208440008250516 0.223613276365293 0.21268028399443 0.208440008250516 0.215083416852194 0.222896979795836 0.22028534051251 5 5 - 19203283 19203688 19203454.273 19203021 19205972 - gene protein_coding_gene TRUE TRUE AT5G47250.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance protein At5g47250 [Arabidopsis Thaliana] (GB:Q9LVT4); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.303335308005212 -3.03611617774991 0.0118021634626951 1 3.32905973587716 8.1089017515699 -0.303335308005212 0.0987541944101338 AT5G42620_at 3.97395179191567 3.86421435876672 4.69721867952572 5.06886513506872 5.82610501070961 4.98754612474466 4.42253192084483 4.63561953837758 3.3292499756223 2.77606265704305 4.54641061055466 4.52528287772901 5.10951769226452 4.63574900420825 4.64150433347438 4.81983711567994 4.50123055171071 4.65072888869351 3.49452418361478 0.232236594621948 0.226341817271471 0.225870480261594 0.231289138315252 0.221906078724515 0.234488222885345 0.226526669062426 0.223884514014194 0.251748509043692 0.238183608792609 0.231233390173347 0.222964048728155 0.226660861400446 0.225035746962046 0.225785537158349 0.224835705450189 0.225668275065072 0.222576438208978 0.228890721351351 5 5|0 +|/ 17085871 17087078 17086311.9 17083547 17088569 + gene protein_coding_gene TRUE TRUE AT5G42620.1 metalloendopeptidase/ metallopeptidase/ zinc ion binding similar to Os03g0731500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051165.1); similar to putative major surface like glycoprotein [Trifolium pratense] (GB:BAE71247.1); contains InterPro domain Peptidase M, neutral zinc metallopeptidases, zinc-binding site; (InterPro:IPR006025); contains InterPro domain EGF-like, type 3; (InterPro:IPR000742); contains InterPro domain EGF-like region; (InterPro:IPR013032); contains InterPro domain Peptidase M8, leishmanolysin; (InterPro:IPR001577); contains InterPro domain EGF, extracellular; (InterPro:IPR013111) 0.38960198346949 3.03578543880866 0.0118090123393185 1 3.32854516941221 8.62387068985223 0.38960198346949 0.164060086462216 AT5G64630_at 0.932565614363747 1.29496670117860 1.70419756896871 1.54669911864199 0.968031713863267 1.08549773815845 1.41560484210366 1.40844348185585 1.35145622532693 1.07376645137119 1.43991638114904 2.12864210950037 1.41016986961372 1.74532173894163 2.22624760802635 1.91249485004321 1.40376834602055 1.88426752360225 0.86982519062367 0.204282155694152 0.206861793686008 0.201807467837126 0.209453484584079 0.205618849244649 0.207726546310693 0.204709703406730 0.205979948793434 0.215749823753475 0.205745897295018 0.21068827032827 0.203125350919927 0.205631158709488 0.205231855361989 0.217154930208969 0.206063954306118 0.211364904027388 0.204252119102879 0.204744898669601 5 5|0 +|/ 25851997 25852983 25852554.111 25850400 25853610 + gene protein_coding_gene TRUE TRUE AT5G64630.1|AT5G64630.2|AT5G64630.3 FAS2 (FASCIATA 2); nucleotide binding Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. similar to HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA), nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT3G44530.1); similar to FAS2 [Glycine max] (GB:AAG30285.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain G-protein, beta subunit; (InterPro:IPR001632) 0.275193199714559 3.03538438656642 0.0118173226481336 1 3.32792120542243 2.72810226862648 0.275193199714559 0.0713501381015166 AT5G23570_at 4.37794252306499 4.59462547668417 5.75383849920394 5.97167630423917 5.8705122606867 5.69458695944961 4.70904416866492 4.39470818014663 3.93416751689511 4.77357580187529 5.47037232543839 5.29315082853292 5.38143803824051 5.6678008401663 5.4865068879286 5.79626415212691 5.56962805826846 5.54303357466408 4.45655860641588 0.240364978971671 0.233263839474146 0.229998106274149 0.236278636066988 0.230787718107140 0.237567055038016 0.23473460880579 0.239393388055278 0.252268679460888 0.236605838730565 0.236016888586886 0.241408654656173 0.240162920574627 0.23539809144383 0.238328916335727 0.234671804712808 0.23380732867965 0.229998106274149 0.238940216044927 5 5 + 7945115 7945842 7945417.364 7943127 7946053 + gene protein_coding_gene TRUE TRUE AT5G23570.1 SGS3 (SUPPRESSOR OF GENE SILENCING 3) Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48670.2); similar to Emr1 [Triticum aestivum] (GB:AAP80862.1); similar to Os12g0197700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066361.1); similar to Os12g0197500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066360.1); contains InterPro domain Region of unknown function, putative Zinc finger, XS and XH; (InterPro:IPR005381) 0.28487894861185 3.03116616460735 0.0119050889718812 1 3.32135819435403 10.1279292864673 0.28487894861185 0.0819339613608753 AT5G43860_at 6.3314307456156 5.97533781596877 6.79581220876418 6.9513718115715 6.65285239121334 6.13840055949239 6.8450186214004 6.0680849866647 4.03870423225751 4.26243983215067 3.9980573339642 4.11368344228994 5.0377050836804 5.2779676275035 4.57664428249592 4.51954814185446 5.7839078583423 4.74516164728207 3.53686132465478 0.21441027282949 0.207959679722915 0.227705499246004 0.221220798067706 0.224512001339621 0.231697556103531 0.215005832868015 0.213744375715067 0.225162009267405 0.214459053479708 0.207517925619034 0.211462275631945 0.206894649565736 0.215150230103206 0.212519314374473 0.208635117247132 0.21261417239045 0.212845971453844 0.206894649565736 5 5 + 17648816 17649360 17649017.818 17647677 17649539 + gene protein_coding_gene TRUE TRUE AT5G43860.1 ATCLH2 (Chlorophyll-chlorophyllido hydrolase 2) Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation. Identical to Chlorophyllase-2, chloroplast precursor (EC 3.1.1.14) (AtCLH2) (Chlorophyll-chlorophyllido hydrolase 2) (Chlase 2) (CLH2) [Arabidopsis Thaliana] (GB:Q9M7I7); similar to ATCLH1 (CORONATINE-INDUCED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G19670.1); similar to chlorophyllase 2 [Brassica oleracea] (GB:AAN51934.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Chlorophyllase; (InterPro:IPR010821) -0.404733993136109 -3.03063890877445 0.0119161056009204 1 3.32053782312426 10.8210817543518 -0.404733993136109 0.174715591300659 AT5G05110_at 8.94540860569228 8.90234606507885 10.2474250508131 10.3041936424197 10.2848791327431 10.0569670024482 8.7485990967918 9.11117189694673 7.17241395094541 8.38561290680504 8.66974240260967 8.06343672755657 8.94178255689744 8.69349999797244 8.21513623315448 8.80547705658946 9.15959720335535 8.8072521297179 7.95581790015009 0.164772513544147 0.173750652946618 0.169746924929223 0.170071643982132 0.174021594469799 0.165514674605896 0.165415440695712 0.169536500724130 0.2194236147545 0.169285496120668 0.168743398119365 0.176021865955698 0.172370469549202 0.186216572161204 0.164220906700806 0.166209357025693 0.173876325992055 0.178112653592877 0.179082334035313 5 5 - 1507691 1508563 1508129.636 1507420 1508868 - gene protein_coding_gene TRUE TRUE AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.2); similar to cysteine proteinase inhibitor [Ricinus communis] (GB:CAA89697.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) 0.278220380367076 3.03042705675445 0.0119205350010849 1 3.32020819520413 17.8288432071743 0.278220380367076 0.0751304480894362 AT5G52230_at 2.55244518768729 2.80044565488041 3.79089015604335 3.63060588355310 3.67861584738595 4.04982635988460 3.30243193529185 2.93037414204363 2.07110691195925 2.53959658990618 3.45824737826002 3.51114838865799 3.3448032370898 3.32184988188809 3.28194744128412 3.47992167904038 3.82892159182684 2.97292153621858 3.44567670023592 0.241388254375718 0.236676572072461 0.248727282547838 0.236676572072461 0.238229166413713 0.243810503542417 0.240068271277177 0.23821221592586 0.258108314917221 0.242981881675118 0.236676572072461 0.236676572072461 0.243280501016787 0.236819523921757 0.242843282314786 0.236676572072461 0.243523064609371 0.242976927659976 0.243748639516974 5 5 - 21225426 21225885 21225640.727 21225114 21229035 - gene protein_coding_gene TRUE TRUE AT5G52230.1 MBD13 (methyl-CpG-binding domain 13) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to futsch CG3064-PB [Apis mellifera] (GB:XP_001121015.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 0.309127743115271 3.02986744231623 0.0119322434319760 1 3.31933746674774 6.38466950042144 0.309127743115271 0.104324770188844 AT5G47020_at 8.81034941789359 8.81988178661237 9.67569176691339 9.45318398872492 10.1744313412363 9.86695704015037 8.25449467780098 7.99354843380294 9.00321022760817 8.6153710345233 9.99595279332032 9.21159534398678 9.5510425149833 9.53889107348402 9.53526004981277 9.26324622246366 9.39374331296686 9.8280535023914 8.74069185974785 0.122976136329029 0.117659573849254 0.127230956885883 0.126243159952582 0.121775440671818 0.128636971200375 0.124372437649092 0.137541508498904 0.138469912278482 0.127863694653494 0.117578363080514 0.117578363080514 0.118449846409572 0.120338640861529 0.118499123450093 0.121936332348850 0.120908167711674 0.126268217515355 0.130824904730841 5 0|5 /|+ 19106241 19106959 19106571 19099232 19107244 + gene protein_coding_gene TRUE TRUE AT5G47020.1 glycine-rich protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT4G32920.1); similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G11700.1); similar to hypothetical protein MtrDRAFT_AC144766g15v1 [Medicago truncatula] (GB:ABE91983.1); similar to Thiolase [Medicago truncatula] (GB:ABE80802.1); similar to hypothetical protein MtrDRAFT_AC146940g33v1 [Medicago truncatula] (GB:ABE90405.1) 0.282508672095429 3.02919079971568 0.0119464159103376 1 3.31828463961817 18.2941410444598 0.282508672095429 0.0797243069108345 AT5G17690_at 5.29188642252687 5.43292031766443 7.13387225455508 6.85902106739749 6.67924319647918 6.75879037662729 5.13000841078816 5.34515385973194 4.63007970359758 4.85718456041387 5.71681577678685 5.74873270516664 5.70780434947045 5.52032813110406 5.76630985716302 6.2016797403811 6.51877255559845 6.02463025246963 5.22444449422822 0.209130506356327 0.211810816608796 0.219105935143313 0.221695259596838 0.211205285837578 0.228741658980443 0.212017269338297 0.211942961051699 0.230705311177994 0.213311382479412 0.207659587740083 0.207659587740083 0.209613646324086 0.211553143277441 0.223850354456638 0.207659587740083 0.207659587740083 0.214415925871148 0.207659587740083 5 5|0 -|/ 5827509 5828214 5827992.889 5827173 5829684 - gene protein_coding_gene TRUE TRUE AT5G17690.1 TFL2 (TERMINAL FLOWER 2); chromatin binding Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. Identical to Protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) (Protein TERMINAL FLOWER 2) (LHP1) [Arabidopsis Thaliana] (GB:Q946J8;GB:Q9FN82); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G17160.1); similar to Probable protein LIKE HETEROCHROMATIN PROTEIN1 (LHP1) (GB:Q339W7); contains InterPro domain Chromo; (InterPro:IPR000953) 0.270420114474257 3.02885600260599 0.0119534346337492 1 3.31776370573099 11.4811305334367 0.270420114474257 0.0665864903245946 AT5G14090_at 2.91076920200299 3.10184341991457 2.65457665876951 2.72396229706269 2.79511697800718 3.3687150959951 1.97438181848851 1.91601382295797 3.76129325962092 3.00286408692676 3.42615130007038 3.77789132025934 3.06170038421376 3.38442804750945 3.36176355028904 3.28771440527589 2.94860612890162 3.14679706714621 3.57242487184193 0.192603578589552 0.19122902700181 0.192046667853576 0.193332183180477 0.190020918320933 0.202837387520354 0.195065938807723 0.199072961335136 0.209144633206518 0.195209525461704 0.190055688917181 0.197330361505200 0.191347638404250 0.191208110907206 0.202970734166493 0.18867992630885 0.199694325999429 0.194750156859062 0.199325168314314 5 5 + 4548270 4548976 4548474.3 4547214 4549419 + gene protein_coding_gene TRUE TRUE AT5G14090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27025.1) -0.310458256108215 -3.02596405373371 0.012014235758478 1 3.31326381937511 6.05312687744386 -0.310458256108215 0.105796476873718 AT5G13870_at 2.40176007844007 1.70330393709386 2.81320262487496 2.33415742990825 3.15207025177985 3.15256547956828 1.83411955784181 2.17140284018926 2.0699403401396 2.23843595525826 2.37885224919697 2.71524378042976 2.59392562562894 2.57944417813281 2.83993433109051 3.02900206786974 2.79857066873404 2.46133736822983 2.35611082698573 0.202692657621289 0.204386362419645 0.199096515026124 0.212190916889835 0.20360985498004 0.204967881249269 0.199323234571210 0.205091138676143 0.207909067314776 0.207804792165742 0.204820380881954 0.198920697359039 0.199727697855766 0.20376431462605 0.201338736512495 0.200248038186549 0.198920697359039 0.199864125087033 0.212238846263742 5 0|5 /|- 4475092 4475683 4475456.3 4474978 4477047 - gene protein_coding_gene TRUE TRUE AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds EXGT-A4, endoxyloglucan transferase, Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) (XTH5) [Arabidopsis Thaliana] (GB:Q9XIW1); similar to EXGT-A1 (ENDO-XYLOGLUCAN TRANSFERASE), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT2G06850.1); similar to xyloglucan endotransglycosylase (GB:AAB39950.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.378904016568411 3.02358130221699 0.0120645664880588 1 3.30955610897167 4.89334002052468 0.378904016568411 0.157763368482967 AT5G42780_at 1.46278092114291 1.04801700911173 1.53386299640742 1.25297242686244 1.69424382014367 1.31873622687374 1.81570038539421 1.81864742130296 0.525083421985913 1.52375409031326 2.23109946548191 1.78273090592609 1.87301328454178 2.5762443571796 2.14897251891414 2.16543099990551 1.68873765699884 2.20516081645789 1.40300236789503 0.238157387518177 0.246040104943858 0.245779975684849 0.238976848862165 0.235886765559629 0.240622609925109 0.235886765559629 0.238617823329286 0.254625626672700 0.246022596704358 0.242882649421863 0.237406902400818 0.239219515544131 0.237611639979751 0.235886765559629 0.239323124798927 0.248910292664873 0.258359180052805 0.237189329995040 5 5 + 17172217 17172463 17172325.091 17172004 17172985 + gene protein_coding_gene TRUE TRUE AT5G42780.1 ATHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27); DNA binding / transcription factor similar to ATHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G18350.1); similar to ZF-HD homeobox protein-like [Solanum tuberosum] (GB:AAU89768.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) 0.313109943328324 3.02237490997480 0.0120901303499474 1 3.30767884071122 3.11038867294178 0.313109943328324 0.108341514947592 AT5G06265_at 7.24756641006174 7.12342513415004 7.92441941263017 7.8524791638905 8.75029150596207 7.92339586305524 7.6671434882865 7.30911044450067 6.52829738112829 7.05716473218908 7.44964466753425 7.17858321622068 7.40894823220439 7.70789666117962 6.58074180252901 7.81248232843178 7.68419112190298 7.23306248081929 7.22306443275559 0.168875497532193 0.167733669871287 0.163548759112287 0.177614034752792 0.178499773804185 0.163735072057981 0.165282103779596 0.168258253343255 0.17586500222448 0.164296455357781 0.166230488483284 0.165862423257454 0.163231616483434 0.167690073382319 0.188766986190451 0.164286324792085 0.179984293479305 0.1725486675051 0.164503560090316 5 5 + 1906599 1907357 1906902.818 1905293 1908168 + gene protein_coding_gene TRUE TRUE AT5G06265.1 hyaluronan mediated motility receptor-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44280.1); similar to Os07g0250300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059297.1); similar to Os02g0536100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047042.1); similar to Os03g0836500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051825.1) -0.378633440208578 -3.01984963736169 0.0121438193168021 1 3.30374916206494 14.8837885924223 -0.378633440208578 0.157900458041225 AT5G40155_at 1.63516279163186 1.39452897688726 1.56551607765535 1.33912153212290 1.60763007359761 1.53666105157719 1.64113476593090 1.66916660907378 1.88775512935583 2.05069045618997 1.82647932586166 1.62845770405763 1.86905349108615 1.37292859345671 1.26924326116671 1.83360594190433 1.79100132687446 1.93786181911226 1.75677994846072 0.166050289398390 0.170012704553865 0.173896607336912 0.171213965064476 0.168971659683689 0.180478357141284 0.172108680846623 0.170929143918447 0.167855434412206 0.168532733218784 0.166508861180526 0.170578344487436 0.167062381088472 0.165985824228562 0.173696751613586 0.165985824228562 0.173241707029500 0.182239697572828 0.173851342696317 5 5 + 16079420 16079656 16079520.545 16079119 16079776 + gene protein_coding_gene TRUE TRUE AT5G40155.1 Encodes a defensin-like (DEFL) family protein. -0.263180190383922 -3.01952560711455 0.0121507258539644 1 3.30324491592028 3.34335895694735 -0.263180190383922 0.0586809735823956 AT5G38720_at 3.92908349964790 4.33573046483529 4.763581420575 4.96412905398452 4.55114814478657 4.4296057109688 4.17234257172503 4.42634308388172 3.08509403603531 3.56590062982191 3.73399334515474 4.25919718668561 3.68804280074765 3.49743925236419 4.06424142619959 4.26281882795295 3.79319794784402 3.89036302996142 3.65953256920952 0.181960409760334 0.181213924750885 0.185564889569924 0.193602465477159 0.183759027445976 0.203693900767262 0.185497114474532 0.180595356342258 0.186199233461868 0.178996770962105 0.186320894621219 0.181867480648239 0.178996770962105 0.184957664315046 0.182340942744020 0.178996770962105 0.196765516734093 0.188341620214624 0.187785656283265 5 5|0 -|/ 15525649 15526250 15525983.8 15525474 15527789 - gene protein_coding_gene TRUE TRUE AT5G38720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79302.1); contains domain RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED (PTHR13191) -0.293902315143201 -3.01217826800079 0.0123084016212568 1 3.29181064052387 8.11424756320195 -0.293902315143201 0.0923648253022962 AT5G19260_at 4.56342526064805 4.68911890373661 5.56167267832461 5.69326978895882 5.48596589851508 6.05257908090073 5.7428779032288 6.51505106007759 5.04531670914822 5.05647557006733 5.54187969405629 6.82779348948879 6.01586792439005 5.47542852325569 6.39755180374265 5.79591817870623 5.79216133473407 5.76361997668665 5.15494821368085 0.216829640239339 0.194283180638481 0.193423850459104 0.188428476236310 0.193261893725588 0.189921345652654 0.194807571985285 0.199622366063633 0.188561656788473 0.207469057474072 0.191979289590703 0.194512022425274 0.189930119000582 0.189967572611378 0.202379715369013 0.188390564503875 0.213232968772271 0.200913083870163 0.200225049555895 5 5 - 6479703 6480050 6479850.364 6479402 6480448 - gene protein_coding_gene TRUE TRUE AT5G19260.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06020.1); similar to hypothetical protein 12 [Plantago major] (GB:CAJ34820.1) -0.393155746842641 -3.01048247692203 0.0123450867273706 1 3.28917142110628 11.0564239617645 -0.393155746842641 0.168709976747485 AT5G26330_at 2.32733913436973 2.02575192098506 2.47378628443977 2.51498887415996 2.47559051038596 2.68480974358412 3.44297860044266 3.12163640880228 2.77837214327660 2.36204941013197 3.85097086355633 4.44859990467192 3.82456703951804 4.04472713789781 4.74108283915283 4.37879845899354 3.99258645156261 4.21588581047869 2.52518295181260 0.239695477464529 0.223840961319966 0.227972291115081 0.224071373631705 0.233763543670962 0.231632318160185 0.224899208416836 0.237246727725824 0.230487856280570 0.233346203861987 0.228208162678410 0.22808816648392 0.223840961319966 0.231309190319390 0.231941406072757 0.230674466988985 0.241696155771688 0.229096437480971 0.231092818214421 5 5|0 -|/ 9241666 9242600 9242217.4 9241549 9242716 - gene protein_coding_gene TRUE TRUE AT5G26330.1 plastocyanin-like domain-containing protein / mavicyanin, putative similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G31050.1); similar to Blue (type 1) copper domain [Medicago truncatula] (GB:ABE91701.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) 0.285538157628217 3.00839657094373 0.0123903628974253 1 3.28592497819779 6.00453709213087 0.285538157628217 0.0847236456068594 AT5G39360_at 5.96313529040785 5.94609317774383 6.58067145081097 7.05173014511506 7.83740229089318 7.54606655544387 6.11697703205383 6.23487963307527 5.2221802105456 5.64918514002466 6.69819937753566 7.21500760045778 7.14032102495972 7.13026384266837 6.60451363467217 7.47773018587659 7.28774689435526 6.95700225955985 5.80968970107182 0.255522067884929 0.245883718641015 0.251323295329527 0.245155223290630 0.261303334063807 0.262029763774826 0.245051521758354 0.238698732324903 0.271379506577185 0.244122018245544 0.237870247724213 0.235220250422355 0.235220250422355 0.250966162783427 0.251407472254021 0.235220250422355 0.249034840882939 0.235220250422355 0.246372474325252 5 5 - 15770547 15771049 15770833.545 15770220 15771905 - gene protein_coding_gene TRUE TRUE AT5G39360.1 circadian clock coupling factor-related similar to circadian clock coupling factor-related [Arabidopsis thaliana] (TAIR:AT5G15440.1); similar to Os07g0598200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060180.1); similar to Os03g0427000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050411.1); similar to circadian clock coupling factor ZGT [Nicotiana tabacum] (GB:AAK56924.1); contains domain F-box domain (SSF81383) 0.299759779986860 3.00832461176384 0.0123919278187466 1 3.28581298160484 12.9717193401387 0.299759779986860 0.0980418836325882 AT5G03440_at 5.24828759986193 6.16433894351232 6.68013922261249 6.74841232234937 7.46036502200802 7.21557999112465 4.89219568095531 5.75373752115361 4.65292641944713 5.47109119891940 6.84497831925264 6.70661758018172 6.30557903847557 6.69723981484462 6.52856380546363 6.74740945708723 6.49343410796117 6.13020341494337 5.03978119594695 0.249382661023810 0.237048718040189 0.239501717304240 0.233436615148503 0.237251832318434 0.242699805224514 0.238945784298972 0.236702415252688 0.248744596884747 0.236388023253440 0.236551142339765 0.235994337615197 0.232751580059761 0.247135689188371 0.233824629882489 0.232751580059761 0.25521967808607 0.245104868526526 0.232751580059761 5 5|0 -|/ 857181 857861 857511.286 856871 858427 - gene protein_coding_gene TRUE TRUE AT5G03440.1|AT5G03440.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54880.1); similar to hypothetical protein [Glycine max] (GB:AAN03467.1); similar to Os07g0479600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059637.1) 0.474656453773601 3.00619657760205 0.0124382973767766 1 3.28250088659045 12.0760584364709 0.474656453773601 0.222022142185026 AT5G43230_at 0.801438711201504 1.07111640830410 0.913631404791433 0.811690444027395 0.736613199901991 0.767605092639432 0.943882893952686 1.16267238919971 1.28445954022967 1.38275248796449 0.981316232133128 0.704287339548036 1.06352722648012 0.818730425854643 1.26868070139621 0.91202120541298 1.33846509212380 1.28526870295815 1.09735294547482 0.199538797608914 0.199075558838223 0.199465232209934 0.201502030652755 0.200613422157363 0.198648466078796 0.204184363698902 0.200342595451499 0.201580327526515 0.198648466078796 0.203764738053447 0.210507145700052 0.208086515558845 0.205875357100814 0.203714820471898 0.207628974762375 0.207133248669509 0.213051914698013 0.201352847950376 5 5 + 17369300 17369858 17369631.727 17367665 17369975 + gene protein_coding_gene TRUE TRUE AT5G43230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01810.1); similar to hypothetical protein [Nicotiana tabacum] (GB:BAC53933.1) -0.265255933413709 -3.00558112957304 0.0124517405788233 1 3.28154298152633 2.05177737148297 -0.265255933413709 0.0628613438839973 AT5G02030_at 6.52041730699995 6.4766788652144 7.50404168035712 7.81711737422586 8.29348832431676 7.89253221894488 6.14206150300649 6.41192068725373 6.04059786761463 6.38761519909381 7.2550369490735 7.52266032865157 7.60225963074436 7.40918648002793 7.27359328271866 8.06257698297381 7.82573457292975 7.56780085190926 6.75073728665411 0.224515756254530 0.21836863326119 0.218737443392029 0.223298521044661 0.226423752445715 0.227864904781608 0.227453562296581 0.23508608786419 0.231388682795906 0.223451658820512 0.219127838409491 0.21836863326119 0.222027164130864 0.226152766895868 0.222638190594063 0.225687808934824 0.220096274277402 0.221030964899212 0.219823390141015 5 5 + 397962 398713 398505.545 395631 399038 + gene protein_coding_gene TRUE TRUE AT5G02030.1 LSN (LARSON, VAAMANA); DNA binding / transcription factor Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. similar to BLH8 (BEL1-LIKE HOMEODOMAIN 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G27990.1); similar to POX; Homeodomain-related [Medicago truncatula] (GB:ABE84934.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain POX; (InterPro:IPR006563) 0.301127104580036 3.00064440302847 0.0125601061182161 1 3.27385904615035 14.1112020380396 0.301127104580036 0.0999410115092912 AT5G52520_at 9.34313915222515 9.393461274698 9.79658140288667 9.74944244763821 9.70405450665947 9.56387041121729 9.33047525956248 9.3117143196251 9.24174335802958 9.36277895262749 9.71487209766674 9.99793328678152 9.86228407056451 9.86605497473102 10.1978766241632 10.0573975523114 9.68647347152527 10.0480882992308 9.47421861521135 0.092029701523372 0.090560378397786 0.0906958508883223 0.091894274475421 0.0881657446030347 0.0936511070547953 0.0948917497606563 0.0938030956417574 0.104828801511815 0.091130834559258 0.0895120913478589 0.0909868486008407 0.0889083058903312 0.0944832405022513 0.090160216394401 0.0894157283195104 0.100081901653456 0.0876374680367482 0.095111615063144 5 5 + 21330357 21331076 21330753.909 21328289 21331406 + gene protein_coding_gene TRUE TRUE AT5G52520.1 OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT3G62120.2); similar to prolyl-tRNA synthetase [Raphanus sativus] (GB:BAC78195.1); similar to putative prolyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC79747.1); similar to Prolyl-tRNA synthetase (ISS) [Ostreococcus tauri] (GB:CAL57480.1); contains InterPro domain Prolyl-tRNA synthetase, archael and euk type; (InterPro:IPR004499); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain Prolyl-tRNA synthetase, class IIa; (InterPro:IPR002316); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195) -0.243200346676768 -2.99920686011215 0.0125918403300939 1 3.27162145577361 19.1683187746864 -0.243200346676768 0.0272295618994773 AT5G67360_at 8.70498498643972 9.00800952403413 9.39329565732275 9.69407382576273 9.62653068830248 9.63946490412967 9.84299354040531 10.0984845948242 9.94818462079587 9.57439013949476 10.4059182614049 10.3917373576608 10.0697085701981 10.2319303618491 10.3197021634879 10.3288389911642 9.95557547506173 10.4621466769782 9.3743103660401 0.0923552112189895 0.0876946179401108 0.0940840326170838 0.0928156836698728 0.090039333205323 0.0945465087587324 0.089448275637123 0.0915130297671254 0.0979705095494585 0.0916820120559761 0.091890226636626 0.0908664667574587 0.0904721874107456 0.093724469162438 0.0893145255894295 0.0876946179401108 0.0983703442867668 0.0910664612128678 0.0960007538441408 5 5 - 26889489 26889986 26889815.455 26889117 26891805 - gene protein_coding_gene TRUE TRUE AT5G67360.1 ARA12; subtilase subtilisin-like protease that has been located in stem and siliques but not roots. Identical to Subtilisin-like protease precursor (EC 3.4.21.-) (Cucumisin-like serine protease) (ARA12) [Arabidopsis Thaliana] (GB:O65351;GB:P80854;GB:Q39007;GB:Q8RWQ7); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G51750.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G14067.1); similar to Orn/DAP/Arg decarboxylase 2; Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE87035.1); similar to SBT1 [Solanum lycopersicum] (GB:CAA67429.1); similar to subtilisin-like serine proteinase, putative [Musa acuminata] (GB:ABF70004.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.286017544716478 -2.99832186031900 0.0126114172707993 1 3.27024390285537 19.4524746023205 -0.286017544716478 0.0861343582081331 AT5G25750_at 3.50821818198683 3.25927553211828 4.02474099180762 3.95990478748281 3.0295015636722 3.81102441269669 3.50664320062099 3.34354410370964 3.74590234097595 3.56320403905336 3.66636058667530 3.52745382307829 3.95667108743973 3.64707226462350 4.00821712109503 3.67476385684584 3.77055924213418 4.26795678424578 3.36799093027995 0.162850852167030 0.164514444408496 0.164146476657192 0.164020383946829 0.172785351248731 0.163561047519816 0.171923340100590 0.162296689975106 0.166191461022402 0.175468896816842 0.166273362573589 0.164095768900896 0.174596892415234 0.163124753570202 0.167902777961621 0.164323860738687 0.170694853182689 0.162852001383664 0.167051064725779 5 5|0 +|/ 8950905 8951114 8951008.4 8950887 8951146 + gene protein_coding_gene TRUE TRUE AT5G25750.1 unknown protein -0.357980339143681 -2.99774220514343 0.0126242564020177 1 3.26934162940807 7.24231373803036 -0.357980339143681 0.145155158864467 AT5G11690_at 3.26484367337425 3.6261993928391 4.58813280913826 4.88191775391036 4.91454703051098 4.87622687133099 4.32532975387756 4.07213537084252 4.01886063522358 3.86857207524217 5.63673130552295 5.65581092003333 5.44387957490652 5.63585071644986 5.83611085816142 5.22451616079777 5.33242263765352 4.99238909472919 4.59741996261266 0.238474526565242 0.230839074454040 0.242141427529279 0.234005007032418 0.227075148882620 0.228424904483593 0.228202435319345 0.240525622568843 0.255470776136282 0.23373469679414 0.231593531794984 0.233731363606502 0.231863389440120 0.242841629647549 0.234599467723496 0.227075148882620 0.232785443155029 0.229169085274483 0.233530357164821 5 5 + 3761783 3762136 3761961.364 3761245 3762347 + gene protein_coding_gene TRUE TRUE AT5G11690.1 ATTIM17-3 (Arabidopsis thaliana translocase inner membrane subunit 17-3); protein translocase mitochondrial inner membrane translocase similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), protein translocase [Arabidopsis thaliana] (TAIR:AT2G37410.2); similar to unknown [Solanum tuberosum] (GB:ABA81866.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) 0.291844613878225 2.99537839820530 0.0126767507096888 1 3.26566214419773 9.13433231509031 0.291844613878225 0.0919738537007661 AT5G66630_at 2.70789589653192 2.56380961201656 2.63505156181982 3.09291885081003 2.22077551580011 2.43132817807443 2.28136654480024 2.36681567748347 2.68622091106749 2.30860860469972 2.72622379368137 2.28290435564843 2.15036080562666 2.52474594389953 2.43507959407061 2.14943877070788 2.12923367154232 2.61019013589454 2.5669518120062 0.195875452820566 0.204339734103065 0.198035332091306 0.204782405710087 0.199848157752679 0.201853979044023 0.203014818799533 0.198232037678607 0.209437667158046 0.201218227893100 0.207188910113510 0.211138923641178 0.209226118122115 0.196393569190838 0.196334034413918 0.196418977380940 0.207765998610356 0.201078823114941 0.204929035220290 5 5|0 +|/ 26612098 26612887 26612343.667 26609874 26613148 + gene protein_coding_gene TRUE TRUE AT5G66630.1 LIM domain-containing protein similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G66620.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os03g0626600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050702.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781); contains InterPro domain Arabidopsis broad-spectrum mildew resistance; (InterPro:IPR008808) -0.291768537816227 -2.99535875319071 0.0126771878999355 1 3.26563156453498 4.98580318457127 -0.291768537816227 0.0919044571564876 AT5G04540_at 6.57208688738118 7.03153846491786 8.01566226585001 8.01225948998104 8.69665388431315 7.933709490424 6.66695674149805 6.67812187189684 6.61366923447969 6.70584618570763 7.73708642452541 7.9370380806076 7.9276647093221 8.06695646546499 7.55716914290007 8.31175220514711 7.84047711870102 7.77144841217336 6.4131894773009 0.205031887369451 0.197188828191396 0.197464920603372 0.195311219903666 0.196807618532287 0.19811637801787 0.205758698328528 0.196321056730735 0.220199113356212 0.197867216494043 0.197469768099438 0.194996271940378 0.194401881642342 0.203214145146576 0.195712136944766 0.194895090159755 0.203933823818760 0.200556903973764 0.198118984814463 5 5 - 1296835 1297462 1297041.818 1296443 1302445 - gene protein_coding_gene TRUE TRUE AT5G04540.1 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase similar to inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase [Arabidopsis thaliana] (TAIR:AT3G10550.1); similar to PREDICTED: similar to Myotubularin-related protein 2 isoform 1 [Apis mellifera] (GB:XP_395034.2); similar to Os08g0556700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062478.1); contains InterPro domain Myotubularin-related; (InterPro:IPR010569); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387); contains InterPro domain GRAM; (InterPro:IPR004182) 0.370172133595498 2.99495873342697 0.0126860934600068 1 3.26500888770925 14.6865073215417 0.370172133595498 0.154136840598628 AT5G62880_at 6.56182149228588 6.70839194223212 7.54427680638701 6.89894741444306 8.37782010357953 8.25166255900715 6.68449563639408 6.23785610932244 6.21061859648027 6.05771912632786 8.045796884815 7.89882961855807 7.79830299376481 7.51118794433466 7.88028882568341 7.25284311206756 7.24580436051426 7.36037735625699 5.96851198667621 0.181395872591002 0.173713651621665 0.173713651621665 0.177234983133431 0.176370733054878 0.173713651621665 0.177004122633152 0.187962981018702 0.18758842095655 0.180965686947964 0.175815240250871 0.176263009388138 0.173713651621665 0.183796987990236 0.183638485951359 0.176066237503151 0.173713651621665 0.179380057988425 0.174216758273181 5 5|0 +|/ 25254518 25255671 25255117.778 25254360 25256394 + gene protein_coding_gene TRUE TRUE AT5G62880.1 ARAC10/ATRAC10/AtROP11 (rho-related protein from plants 11); GTP binding A member of ROP GTPase gene family. Identical to Rac-like GTP-binding protein ARAC10 (GTPase protein ROP11) (ARAC10) [Arabidopsis Thaliana] (GB:O82481); similar to ARAC8/ATROP10/ROP10 (rho-related protein from plants 10), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G48040.1); similar to Rac2 [Gossypium hirsutum] (GB:AAX77218.1); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras small GTPase, Ras type; (InterPro:IPR003577); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.350362818982320 2.99425113186389 0.0127018621379760 1 3.26390741827835 14.0097234030368 0.350362818982320 0.139878652880365 AT5G01075_at 1.28865122911985 1.67375140554896 1.05723484638489 0.965390517891923 1.31537921255034 1.31631300981856 1.51699082419298 1.69285662658059 2.48494520733067 2.40689429346527 3.77981228920636 3.28339017790735 2.44204640047803 2.53742845160499 2.76774630963991 2.09247648965533 1.92658333725863 2.7365545035409 2.70856138646941 0.233057824666841 0.234258200618731 0.237102502974666 0.242144447765899 0.239411743202872 0.236057766915976 0.241002586374894 0.237414510805891 0.23877813315126 0.237133055796733 0.243297883563889 0.240699001490829 0.236736334841687 0.232811473132320 0.249480825095497 0.232811473132320 0.240702746073626 0.236290682929777 0.236873308257717 5 5|0 -|/ 27098 27394 27231.4 26853 27448 - gene protein_coding_gene TRUE TRUE AT5G01075.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79538.1); contains domain gb def: Hypothetical protein (At5g01075) (PTHR23421:SF7); contains domain BETA-GALACTOSIDASE RELATED (PTHR23421) -0.274743872290314 -2.99419528787279 0.0127031074466775 1 3.26382048986199 3.96793181267762 -0.274743872290314 0.0749682668695632 AT5G19840_at 3.13863483019578 2.4871887584234 4.01257483410817 3.86073162956647 4.24301481353213 3.86243810321761 3.21053402484752 2.84533814750131 2.34513528242457 2.27937832365383 2.59785731749674 2.60332617486354 2.93689655897376 3.06477911128464 2.687140138257 2.98402619005999 3.12458279521582 2.50571592397519 2.26030050295120 0.186405905230532 0.183611589813214 0.191859245897163 0.186946636386352 0.190993664118139 0.204773228409490 0.183016688971318 0.187448859550947 0.188667562800038 0.192227821066089 0.183016688971318 0.183016688971318 0.196629357951025 0.184920362410915 0.184109569192379 0.183528762849673 0.187554160104806 0.186894435962240 0.188485648209193 5 5|0 +|/ 6708067 6709347 6708502.222 6705374 6709794 + gene protein_coding_gene TRUE TRUE AT5G19840.1 transcription factor jumonji (jmjC) domain-containing protein similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G20810.1); similar to transcription factor jumonji (jmjC) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52940.1); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Cupin region; (InterPro:IPR007113) 0.360662955359347 2.99406672365595 0.0127059748693958 1 3.26362036279747 6.01154617397856 0.360662955359347 0.147416268176483 AT5G62160_at 2.33914846566551 2.19678862528926 2.54412376118505 2.95359092365476 2.49398770095571 2.09191513283984 2.12845351772043 1.96230513805340 2.50124968669641 3.05465958116709 2.40728242951967 2.43946094477603 2.64411208644261 2.45349692770657 2.3635641903466 2.35285663401796 2.92375371510165 2.63985041861664 3.2407988103086 0.219110476365374 0.218709419872456 0.231456715540338 0.222623629519976 0.219840268918771 0.217304084069723 0.221825227107933 0.221540113122644 0.232495798983879 0.219056301514186 0.227535809659393 0.22304025505157 0.215761836023368 0.222579193661154 0.218703862646475 0.222504740548057 0.225619189202877 0.23034755741434 0.221575056891880 5 5 + 24977823 24978450 24978182.545 24977333 24978489 + gene protein_coding_gene TRUE TRUE AT5G62160.1 ZIP12 (ZINC TRANSPORTER 12 PRECURSOR); cation transporter member of Fe(II) transporter isolog family Identical to Probable zinc transporter 12 precursor (ZRT/IRT-like protein 12) (ZIP12) [Arabidopsis Thaliana] (GB:Q9FIS2); similar to ZIP5 (ZINC TRANSPORTER 5 PRECURSOR), cation transporter [Arabidopsis thaliana] (TAIR:AT1G05300.1); similar to metal transport protein [Medicago truncatula] (GB:AAR08412.1); contains InterPro domain Zinc/iron permease, fungi and plants; (InterPro:IPR004698); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) -0.307643971589262 -2.99298295595761 0.0127301726145295 1 3.26193332613677 5.06893075535716 -0.307643971589262 0.106283929962139 AT5G62760_at 2.11587336877747 2.28536047409570 1.72740908834887 2.29465889345139 3.16436471741868 2.45655745183031 1.93148209028718 1.95660347265205 1.64913421745347 1.47808719830377 2.34176354446397 2.52028523178676 2.45950847573952 2.50482096645048 2.36261294805085 2.51995161551223 1.79291758024041 2.46423482899784 1.60484682125736 0.203155417554126 0.200031442890408 0.21075127913438 0.203872308264991 0.205886133403388 0.208277481291843 0.200031442890408 0.205430466338811 0.205641799609638 0.208474605440876 0.204430890401034 0.202874591127140 0.200031442890408 0.207346764048102 0.200031442890408 0.200521974066916 0.205781979615593 0.207059897022199 0.205294319484187 5 5|0 -|/ 25225461 25226029 25225767.125 25221698 25226734 - gene protein_coding_gene TRUE TRUE AT5G62760.1|AT5G62760.2 nuclear protein ZAP-related similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT1G49490.1); similar to nuclear protein ZAP-like [Oryza sativa (japonica cultivar-group)] (GB:BAD25050.1); contains domain gb def: Similarity to nuclear protein ZAP (PTHR13413:SF3); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540); contains domain FAMILY NOT NAMED (PTHR13413)|similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT1G49490.1); similar to unnamed protein product; contains similarity to nuclear protein ZAP gene_id:MQB2.8-related [Medicago truncatula] (GB:ABE84462.1); contains domain gb def: Similarity to nuclear protein ZAP (PTHR13413:SF3); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540); contains domain FAMILY NOT NAMED (PTHR13413) 0.377845814315875 2.99253215376785 0.0127402515762844 1 3.26123158392299 4.21559768356277 0.377845814315875 0.159747399376413 AT5G57655_at 7.59477503485747 7.75359686936495 8.51552502647682 8.58845558457795 9.67561161146708 8.87919028576852 6.63900610455098 6.52904918108293 6.71288576343067 5.77119093771197 6.94138344660213 6.40272301677191 7.30388396988005 7.49798599525177 7.0310396895148 7.22565736639772 7.3242500745551 7.09305607539864 6.04110629276688 0.214505083888122 0.204121074923106 0.224002186400317 0.219704070034755 0.210408299105135 0.232391219257464 0.222795142603589 0.209359780543258 0.202562927903253 0.219178549417593 0.207299011227166 0.211859228231965 0.217005510584696 0.209610689388595 0.21411353905248 0.213378132569367 0.210046415989378 0.209253039749010 0.215723981662657 5 5 + 23364845 23365899 23365511.364 23363986 23367265 + gene protein_coding_gene TRUE TRUE AT5G57655.1|AT5G57655.2 xylose isomerase family protein Identical to Xylose isomerase (EC 5.3.1.5) (XYLA) [Arabidopsis Thaliana] (GB:Q9FKK7); similar to Xylose isomerase [Medicago truncatula] (GB:ABE83402.1); contains InterPro domain Xylose isomerase-like TIM barrel; (InterPro:IPR012307); contains InterPro domain Xylose isomerase; (InterPro:IPR001998)|Identical to Xylose isomerase (EC 5.3.1.5) (XYLA) [Arabidopsis Thaliana] (GB:Q9FKK7); similar to Xylose isomerase [Medicago truncatula] (GB:ABE83402.1); similar to Xylose isomerase (GB:Q40082); similar to xylose isomerase [Hordeum vulgare subsp. vulgare] (GB:CAA64544.1); contains InterPro domain Xylose isomerase, bacterial type; (InterPro:IPR013452); contains InterPro domain Xylose isomerase-like TIM barrel; (InterPro:IPR012307); contains InterPro domain Xylose isomerase; (InterPro:IPR001998) 0.353390611631645 2.99110127193369 0.0127722964444697 1 3.2590041783084 14.6606804384015 0.353390611631645 0.142381054034054 AT5G05800_at 6.81009071075394 6.66941498528394 7.66443051607202 7.75838930150428 8.3232676745205 8.06163544572455 6.98919902844295 6.95375602077144 6.96414634130346 7.0726695927329 7.44728418895463 7.51004644193845 7.33516821754287 7.6850506523214 7.37476012609893 7.8533195176755 7.32812958490247 7.59698778612649 7.348816059197 0.206602020105894 0.190067753920007 0.206644890273448 0.200799958988196 0.194016750376598 0.213805210114607 0.189005936530475 0.198691742075759 0.233278251869909 0.193996643267375 0.200910210627579 0.189005936530475 0.198598293269345 0.193524930024841 0.199272704424606 0.194872018243864 0.207709716064414 0.198438729648360 0.191255749687771 5 5 - 1743237 1743757 1743525.364 1743087 1745246 - gene protein_coding_gene TRUE TRUE AT5G05800.1|AT5G05800.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11290.1); similar to PIF-like orf1 [Daucus carota] (GB:ABB83643.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.257146962356029 -2.98761820084066 0.0128506412878853 1 3.25358207292102 14.7262166164790 -0.257146962356029 0.0542645848503946 AT5G25390_at 2.57361587094263 2.39364313692142 2.27188917831873 2.49219411703222 2.16305180672610 2.37316408336774 2.09548593525531 2.41605976755091 2.56084265615521 2.70930279326371 3.02751158006975 2.98479558918297 2.2065575772109 2.67484058131145 2.67349448150738 2.89817248980597 2.79643950871165 3.0012179369407 2.88453159889451 0.250946003357506 0.245866188489941 0.253552590868623 0.255952859927264 0.244992063788164 0.248397158615322 0.242839702834591 0.254124863107627 0.251356881542038 0.250428311816322 0.242941252510179 0.242903441466680 0.242185772086630 0.241989521641984 0.236971969106462 0.239226676780296 0.247507820789138 0.236971969106462 0.238228235442365 5 5 + 8820672 8821719 8821434.909 8820479 8821995 + gene protein_coding_gene TRUE TRUE AT5G25390.1|AT5G25390.2 SHN2 (SHINE2); DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to SHN3 (SHINE3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11190.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE88476.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.281393824910842 -2.98705198201224 0.0128634230685465 1 3.25270062224807 5.09794018744625 -0.281393824910842 0.0826033257667854 AT5G58050_at 1.89122641074084 2.1387005887655 1.85008807054121 2.00220019770219 1.74136129840118 1.75195258167926 1.68336478473302 1.59558170262144 2.65756897759514 2.02500025699556 2.11503759168005 2.28728408885116 2.60152872623065 2.55532176707749 2.09569263487789 2.36570237953028 2.29641407699129 1.67491938714655 2.53177413677317 0.198765857681790 0.202708061695874 0.204316831036094 0.208282876510791 0.204726045381146 0.207749212097482 0.203254094212679 0.205818232803532 0.207193283178414 0.198765857681790 0.201890282716669 0.204505084123395 0.204786243231219 0.205891288663095 0.209911539087686 0.200439142015205 0.214027088286168 0.208120990067495 0.209346817245555 5 5 - 23511724 23512375 23511992.636 23511475 23514807 - gene protein_coding_gene TRUE TRUE AT5G58050.1 glycerophosphoryl diester phosphodiesterase family protein similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT5G58170.1); similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66970.1); similar to MRH5/SHV3 (morphogenesis of root hair 5), glycerophosphodiester phosphodiesterase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26690.1); similar to Os02g0187400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046128.1); similar to Os02g0588500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047275.1); similar to glycerophosphoryl diester phosphodiesterase 2 precursor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15424.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) -0.255889243876998 -2.98702062445483 0.012864131306863 1 3.25265180681981 4.15869380706614 -0.255889243876998 0.052546991550232 AT5G66490_at 8.43550542329719 8.54653818913276 9.44191678392441 9.38408724657987 9.636867585168 9.58410628011001 8.75796181085689 8.96912863855904 8.69955501957202 8.94608703966188 8.89862369481803 8.8713791122057 9.3793950758431 9.1516661777668 8.47044861347739 9.32810056017907 9.52625421787686 8.88803830469081 8.92397596140134 0.082131563152892 0.0802906553350887 0.0850934194201348 0.0869969082249228 0.079361417429333 0.0866351408435067 0.0787866476686098 0.0883665190080411 0.0900948409497886 0.0801655879658683 0.0809913847747744 0.0802509586157767 0.0809122104963154 0.0857647086164746 0.0843009102958279 0.0806364142745524 0.088032068794829 0.0852811836691918 0.078674055637117 5 5 - 26564663 26564948 26564839.091 26564453 26564994 - gene protein_coding_gene TRUE TRUE AT5G66490.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50900.1); similar to hypothetical protein [Thellun (GB:ABB45855.1) -0.24971617293243 -2.98280507568805 0.0129597027067602 1 3.24608918888827 18.054902774613 -0.24971617293243 0.0434528216828566 AT5G42765_at 6.83085151964672 7.4542758035032 7.15760833461237 7.41364907768083 7.65788952592134 7.27122949046583 7.48597317604638 7.67379301661342 7.28151921196724 6.60483278288448 8.33019622319042 8.41880563671692 8.10206944897586 8.54406356466425 8.24915083516595 8.6873942910191 7.65479011962874 7.6868933366028 6.95038909769778 0.185287075036220 0.181481950698632 0.183734708922888 0.180067938308193 0.172505350403217 0.188582089211945 0.172426524491265 0.172426524491265 0.187324590317379 0.196396840865747 0.179041198406364 0.176845839815096 0.175472845460379 0.173020377056613 0.183378986595358 0.175777679919196 0.182859963214286 0.192348884644836 0.181081223367830 5 5|0 -|/ 17167768 17168744 17168309.889 17167466 17168909 - gene protein_coding_gene TRUE TRUE AT5G42765.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP68897.1); similar to Os03g0774400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051422.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99113.1); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) -0.346790356698709 -2.98144760156116 0.0129906306276464 1 3.24397587052075 14.9455341411506 -0.346790356698709 0.138335202200297 AT5G66750_at 1.27344393939979 1.12517482135133 1.80272750616152 1.63238231120450 1.08318118419922 0.91150807698906 1.7944728067463 1.38890994429061 1.47456721824507 1.57375061796620 2.37208823454566 2.98008550608456 2.00097696383532 2.01813110301161 2.76868592009414 1.95172949561438 1.70624359263638 2.08090793460825 1.15090779336522 0.179657175059830 0.179657175059830 0.184555085733946 0.182488952581062 0.180494296180462 0.185899599758239 0.180269746180022 0.181599550203248 0.182599785116366 0.187068455504671 0.185363341534595 0.18426671441638 0.183565397036704 0.185390130168441 0.188192731356610 0.179657175059830 0.18885836856203 0.182823224685353 0.184858940347888 5 5|0 +|/ 26669345 26669975 26669719.625 26666177 26670299 + gene protein_coding_gene TRUE TRUE AT5G66750.1 DDM1 (DECREASED DNA METHYLATION 1); helicase Protein is similar to SWI2/SNF2 chromatin remodeling proteins. Involved in gene silencing and maintenance of DNA methylation and histone methylation. similar to CHR17 (CHROMATIN REMODELING FACTOR17), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT5G18620.2); similar to chromatin remodeling factor DDM1a [Oryza sativa (japonica cultivar-group)] (GB:BAF34942.1); similar to chromatin remodeling factor DDM1b [Oryza sativa (japonica cultivar-group)] (GB:BAF34943.1); similar to putative chromatin complex subunit A101 [Oryza sativa (japonica cultivar-group)] (GB:BAD38081.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.283800503196476 2.98023950974639 0.0130182177913683 1 3.24209509088867 3.19377405895743 0.283800503196476 0.0856496655695266 AT5G52040_at 9.30094194537245 9.35222281262525 10.0115974268654 10.1268287426587 10.2146099901018 9.79303701979802 9.50004900935272 9.591409033805 9.35078131837446 9.61724914606066 9.96766469429407 9.73844474811373 10.0244082250802 9.74567196458566 9.66305481401527 9.8607546565405 9.62616088567073 9.87518581190406 9.76486523769217 0.0978287025562618 0.100473012858920 0.103556805081335 0.100117617785612 0.100584608730770 0.102532441974494 0.100380490351921 0.102267188628045 0.118279876511947 0.100959374769714 0.102926644802496 0.097258694742681 0.100330105372705 0.109679280880342 0.0997003005233118 0.0988854354849192 0.113874570723607 0.109998582636888 0.105510446370147 5 5 + 21149947 21150388 21150143.455 21147546 21150847 + gene protein_coding_gene TRUE TRUE AT5G52040.1|AT5G52040.2 ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41); RNA binding encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Identical to Arginine/serine-rich-splicing factor RSP41 (RSP41) [Arabidopsis Thaliana] (GB:P92966;GB:Q9FJ88); similar to ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35), RNA binding [Arabidopsis thaliana] (TAIR:AT4G25500.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Arginine/serine-rich-splicing factor RSP41 (RSP41) [Arabidopsis Thaliana] (GB:P92966;GB:Q9FJ88); similar to ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35), RNA binding [Arabidopsis thaliana] (TAIR:AT4G25500.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.275945563077585 -2.97876691397168 0.0130519250132195 1 3.23980250176321 19.4314870604397 -0.275945563077585 0.0777742405725733 AT5G59340_at 1.87256672353067 1.97724348790501 2.85287079938104 3.08050753386605 3.74517448294149 3.51261192941561 3.3945127433954 3.67959894635471 2.08480644082538 3.06175123920465 2.67230380473129 2.96960468255939 3.73822461722619 3.83331891903859 2.47215931602782 4.60809377811637 3.4640337681238 3.7145085391575 2.58378419331900 0.268917875577265 0.279836935173495 0.268008953131081 0.263719973411827 0.260702721803996 0.276267222860621 0.275733709307681 0.260702721803996 0.274476617850361 0.262874397795746 0.260702721803996 0.269870355904766 0.268769158117127 0.271067309800931 0.268982647445102 0.275449064554135 0.297020742967547 0.265022366370154 0.270771798659647 5 5 - 23950653 23951723 23951012.182 23950630 23951916 - gene protein_coding_gene TRUE TRUE AT5G59340.1 WOX2 (WUSCHEL-related homeobox 2); transcription factor Arabidopsis thaliana clone 1 WOX2 protein mRNA Identical to WUSCHEL-related homeobox 2 (WOX2) [Arabidopsis Thaliana] (GB:Q6X7K1;GB:Q6X7K2;GB:Q9FIE5); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G18010.1); similar to homeodomain transcription factor [Picea abies] (GB:CAL18267.1); similar to Os01g0840300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044759.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) 0.275158389746708 2.97782827630331 0.0130734560915729 1 3.23834118351757 6.01979160713489 0.275158389746708 0.0770307485874794 AT5G65940_at 8.08734249511914 8.16375890679775 8.88245121759505 8.7674614833358 9.05785648134975 8.67960995674143 8.15864535546412 8.18122807793596 7.84924028629409 8.53122678620331 8.93625823894391 8.8838677550069 8.7718180551675 8.83897394717355 8.7753194321847 8.9159322274662 8.62702345598818 8.45552146367788 8.62591047725481 0.151632358396112 0.148712395362307 0.14931082996884 0.151331211157789 0.154186186696241 0.150111670287829 0.151782744286339 0.15094589032899 0.160498911948968 0.151496355050570 0.148774176521776 0.147612035189130 0.157120585268772 0.148960552453057 0.143284699486310 0.148102778317401 0.162841822341309 0.151540047727996 0.150623293945275 5 5|0 -|/ 26394063 26395093 26394572.3 26393836 26396461 - gene protein_coding_gene TRUE TRUE AT5G65940.1|AT5G65940.2|AT5G65940.3 CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase|CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1) hydrolyzes beta-hydroxyisobutyryl-CoA similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative [Arabidopsis thaliana] (TAIR:AT2G30660.1); similar to Os12g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066529.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96998.2); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753)|similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative [Arabidopsis thaliana] (TAIR:AT2G30660.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97000.2); similar to Os12g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066529.1); similar to 3-hydroxyisobutyryl-coenzyme A hydrolase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96998.2); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753) -0.268565684497799 -2.97738696076836 0.0130835916650662 1 3.23765411763945 17.0528184993933 -0.268565684497799 0.0697911500562467 AT5G04890_at 4.15981188946671 3.98802224245935 4.29517792143457 4.18829944984476 3.74120351522693 4.3499943074632 4.03651660996626 4.1464118155407 4.47374711894331 4.55181146775913 5.36806123439061 6.165187348799 5.49598141947254 5.18426211156604 5.71302077241171 5.56819594399071 5.26627201519717 5.30929900917497 4.42508856563204 0.237497260236887 0.236743250063988 0.232665923467219 0.234399772155810 0.237905596359091 0.234574740041017 0.236336083027589 0.232606524801672 0.250285537159744 0.232606524801672 0.236609543338343 0.255182225674057 0.238469748184142 0.243506209631743 0.241564030908378 0.246360047241565 0.235932435772578 0.232606524801672 0.232606524801672 5 5 + 1427848 1428302 1428140.091 1427174 1428455 + gene protein_coding_gene TRUE TRUE AT5G04890.1 RTM2 (RESTRICTED TEV MOVEMENT 2) Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT3G10680.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT44298.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) -0.313395229059841 -2.9757907352986 0.0131203180354257 1 3.2351690009052 9.10934673525206 -0.313395229059841 0.112636902435069 AT5G03040_at 8.4022341409774 8.57508367671824 9.36908569756975 9.40837919886888 9.92299661401642 9.89669735382184 9.48645134385327 9.43992524990766 9.52438963101246 8.95090995181959 10.9759208129947 10.2767373855763 10.6954884637914 10.6022544854963 10.4337125640505 10.1109353031943 9.9253535006868 10.4056350044158 9.11414524211577 0.103408752385553 0.106394897848126 0.100065462341097 0.100257765121917 0.098233190786007 0.099729964768626 0.101788046660766 0.104866156150007 0.107772920688566 0.104027339664892 0.098233190786007 0.101126957486022 0.101159451641857 0.0988177062999828 0.100404224245533 0.0995271606136421 0.111115136728357 0.102070613120656 0.10094658367444 5 5 - 710919 711996 711490.364 710100 712787 - gene protein_coding_gene TRUE TRUE AT5G03040.1 IQD2 (IQ-domain 2); calmodulin binding similar to IQD1 (IQ-DOMAIN 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G09710.1); similar to IQ calmodulin-binding re (GB:ABE78306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.243050362812548 2.97309081225673 0.0131826756544923 1 3.23096550237721 19.1249748086375 0.243050362812548 0.0320395508423132 AT5G49980_at 9.72194007517557 9.75304576701875 10.0649830108992 10.1991554815934 10.4484407198900 10.5888513597120 9.10375606349151 9.3119668309418 8.67665298917752 9.0687941129021 10.1461482307238 10.0121337371716 10.1173838069824 10.1220352349285 9.4467303770822 9.97050997620363 10.3398975538655 9.98963312849576 9.17793193693379 0.0990617585093496 0.094906018931014 0.0977921800201725 0.0966246745205735 0.0974491004806958 0.0993293957882127 0.0978320260770169 0.096610963248767 0.116069211115821 0.110792275095598 0.0953300648730057 0.094906018931014 0.0967714750109525 0.098199025929507 0.097954624774427 0.096043725314238 0.095593362123819 0.0973998313466884 0.105862262171423 5 5 - 20351651 20352212 20351976.727 20351190 20353891 - gene protein_coding_gene TRUE TRUE AT5G49980.1 AFB5 (AUXIN F-BOX PROTEIN 5); ubiquitin-protein ligase similar to F-box family protein (FBX14) [Arabidopsis thaliana] (TAIR:AT4G24390.1); similar to Os02g0759700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048183.1); similar to F-box containing protein TIR1 [Populus tremula x Populus tremuloides] (GB:AAK16647.1); similar to Putative F-box containing protein TIR1 [Oryza sativa (japonica cultivar-group)] (GB:AAN64135.1); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.252648997697487 2.97259144395112 0.0131942418476469 1 3.23018802900879 19.3952767562667 0.252648997697487 0.04956639868201 AT5G59130_at 8.39380342022824 8.28187571400517 8.54927947086884 8.45198997562435 9.32698011965524 8.96043908893424 9.97688427071223 9.4543813655669 5.18578685645165 8.03804170474072 9.19966148937297 9.16996043567045 9.68985525709335 9.32097654029496 8.94927130885914 9.76585090009206 9.2547576746657 9.22341580741422 7.18966746769945 0.153776955897253 0.144533433657128 0.150324101490274 0.144316480709299 0.143241696735657 0.156500921411304 0.151285436485855 0.147274472337184 0.167044223155558 0.151406612678403 0.143241696735657 0.143241696735657 0.147434109270057 0.145856497413796 0.148044371751764 0.143241696735657 0.151053389146400 0.155653158293170 0.159160126774601 5 5 - 23887424 23888087 23887748.818 23887373 23890917 - gene protein_coding_gene TRUE TRUE AT5G59130.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.3); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.313925537700815 2.97216675920031 0.0132040863071468 1 3.22952682932807 16.9875628546895 0.313925537700815 0.113394346813948 AT5G27620_at 3.26127654423192 3.18668232949679 4.49191358105608 4.75752451776505 4.44871862863765 4.5288395997782 3.79459213728924 3.6446389545638 3.56816312188004 3.3804588946183 4.03232508506558 4.26066089791088 4.1201141025131 4.05119615190844 3.96388269263815 4.28308997799374 4.62452717693208 4.23124079761751 3.05845452678966 0.190320004857305 0.190902744439976 0.194063238821889 0.193928140397391 0.193740886443644 0.209665869732040 0.195455433164498 0.200937536259979 0.2025802050863 0.198687910162995 0.204340535818940 0.190320004857305 0.199993157325541 0.190320004857305 0.190535247246937 0.19335767836834 0.210233181608270 0.193846258234256 0.196504887588871 5 0|5 /|+ 9773059 9774649 9774100.125 9771329 9774878 + gene protein_coding_gene TRUE TRUE AT5G27620.1 CYCH;1 (CYCLIN H;1); cyclin-dependent protein kinase/ protein binding / protein kinase core cell cycle genes similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48640.1); similar to CAK associated cyclinH homolog [Populus tremula x Populus tremuloides] (GB:AAD02871.1); contains InterPro domain Transcription factor TFIIB, cyclin-related; (InterPro:IPR013150); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.257054471569678 2.97138523074069 0.0132222220103127 1 3.22831004781968 7.78005918231155 0.257054471569678 0.0560811383540631 AT5G07300_at 6.85043425247934 6.65314481740515 7.81521781833845 7.72646448417099 7.90252465045038 7.67296971833036 6.4363316622482 6.07044480672223 5.94971199904414 5.42132120810176 6.87769912018209 7.14221904289053 7.09661027896347 6.45470333813062 7.04938315319435 7.10031614360436 7.2719095369756 6.5633186407568 5.34441899779187 0.182179737664499 0.178909524434135 0.192585642721721 0.187307248381694 0.187621368745701 0.187360053147329 0.187200217323427 0.183656793191778 0.206438650484872 0.191395035773207 0.182731359382444 0.179070326062412 0.177206164455143 0.183359189715903 0.191651815799014 0.179954957146830 0.190320818114099 0.189863984818159 0.183174939977917 5 5 + 2302110 2302811 2302421.455 2299888 2303269 + gene protein_coding_gene TRUE TRUE AT5G07300.1 BON2 (BONZAI 2) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. similar to BON1 (BONZAI1), calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G61900.3); similar to BON3 (BONZAI 3) [Arabidopsis thaliana] (TAIR:AT1G08860.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT58837.1); similar to Os02g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046976.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.280903337617439 2.97138296949121 0.0132222745200427 1 3.22830652721334 13.3991101805097 0.280903337617439 0.0835997211167717 AT5G15140_at 0.642520389361192 1.08295048991574 1.10976784763111 1.24611347075884 0.99676490565632 0.963205204820235 1.21454141872647 1.05269926806016 2.06664820119925 1.45786602361756 1.12894658432205 1.21352137518335 1.13681706769128 1.40601106361482 1.482521543813 1.36822613759634 0.787522144267891 1.29456048670221 1.59662643572605 0.228419062184599 0.225665739256045 0.223186510791267 0.231259591236295 0.225158879733803 0.229461307664012 0.223186510791267 0.232022486515624 0.229551287381205 0.230228304301155 0.23241074125028 0.224346285805151 0.238680589089664 0.223670733095023 0.229904752132907 0.223361629211494 0.238491328975390 0.244879102933017 0.227276124693790 5 5 + 4910056 4910631 4910380.636 4908689 4910800 + gene protein_coding_gene TRUE TRUE AT5G15140.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G01260.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE81353.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) -0.281998146611359 -2.97072247775175 0.0132376211796457 1 3.22727818569922 2.5057267179895 -0.281998146611359 0.0847593296739179 AT5G67030_at 12.1038549434618 12.0480325515160 12.7691735745744 12.6687437911648 12.6642284667233 12.5345797567558 12.9521674297746 13.0329584093367 12.5821805868382 12.8771148503142 13.0551556891870 12.8725752420918 13.1299745769742 13.1048071819385 12.7385063397074 13.1833693598667 13.0760031034390 12.9301319643326 12.7108050417094 0.0528567933033814 0.0506890201739402 0.051429463318236 0.0506992382326768 0.0517984950584981 0.0510301849806023 0.0515323400897386 0.0516007275642634 0.055588577262954 0.0506890201739402 0.0533534322292041 0.0521640197820618 0.0511949041701504 0.0540306513149609 0.0519454258491298 0.0506890201739402 0.0561905192407603 0.0524694674846621 0.0518984051507248 5 5|0 -|/ 26771180 26772194 26771683.667 26770736 26774462 - gene protein_coding_gene TRUE TRUE AT5G67030.1|AT5G67030.2 ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. similar to CTF2B, monooxygenase [Arabidopsis thaliana] (TAIR:AT2G29720.1); similar to zeaxanthin epoxidase [Thellun (GB:AAV85824.1); similar to zeaxanthin epoxidase [Vitis vinifera] (GB:AAR11195.1); similar to Zeaxanthin epoxidase, chloroplast precursor (PA-ZE) (GB:O81360); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953); contains InterPro domain SMAD/FHA; (InterPro:IPR008984)|similar to CTF2B, monooxygenase [Arabidopsis thaliana] (TAIR:AT2G29720.1); similar to zeaxanthin epoxidase [Thellun (GB:AAV85824.1); similar to zeaxanthin epoxidase [Vitis vinifera] (GB:AAR11195.1); similar to Zeaxanthin epoxidase, chloroplast precursor (PA-ZE) (GB:O81360); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953) -0.24326001332302 -2.96997291664408 0.0132550591662736 1 3.22611116351309 25.4640584946531 -0.24326001332302 0.0330793667181537 AT5G19855_at 8.3934596081624 8.43964975828465 9.11821800837082 9.22439255888678 9.59262532289024 9.06422773144458 9.6433162919233 9.58234159059668 8.87944060917958 8.8882522379706 9.59094860276863 9.49396628823865 9.65880425087674 9.5852504847995 9.43200430177985 9.68659738901185 9.38725076536864 9.44838435779308 8.77037683223041 0.126386853435724 0.136094818438397 0.134382621158487 0.137420584511568 0.13158261561358 0.134866111345851 0.126003120890428 0.125995657087623 0.139149597893026 0.13890593832901 0.132609417025658 0.126203243962596 0.133715390040427 0.130844234259582 0.128242772051984 0.127534433110996 0.131507260686074 0.128364977272099 0.130301815118135 5 5|0 -|/ 6712172 6713397 6712986.5 6711974 6713638 - gene protein_coding_gene TRUE TRUE AT5G19855.1 similar to Os03g0807900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051646.1); similar to chaperonin-like RbcX [Trichodesmium erythraeum IMS101] (GB:YP_723870.1); similar to Os07g0569600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060039.1) -0.291601672334355 -2.96844255932114 0.0132907338311759 1 3.22372846974771 18.3229908745898 -0.291601672334355 0.0942041455779004 AT5G49470_at 5.47227186103836 5.25030003975365 6.15075297094916 6.1047787621977 6.41823331347569 6.3791277611608 5.84947515395041 5.24493875068661 5.75523655061999 5.26604033505224 6.18621308511116 6.07763124191901 5.67744990406109 6.41077612477149 5.73077075896839 6.24415804619711 6.05349323641935 6.33542951125251 5.45579769211125 0.211549499086394 0.203327446723385 0.208503900179894 0.204002364704916 0.204580070778118 0.211578820274354 0.213497932083707 0.209012309225803 0.221427483839734 0.216657995255728 0.205961307425567 0.210644682757918 0.206337982641613 0.213308912980134 0.205363292171015 0.203327446723385 0.212357115473493 0.204196602621112 0.207530123884229 5 5|0 +|/ 20083159 20084725 20084127.875 20080674 20085891 + gene protein_coding_gene TRUE TRUE AT5G49470.1|AT5G49470.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67890.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06640.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06620.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98953.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67890.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06630.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G06620.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98953.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PAS fold; (InterPro:IPR013767) -0.311652407063339 -2.96721747885690 0.0133193619160632 1 3.22182106039101 11.6496590422426 -0.311652407063339 0.111935553685494 AT5G59890_at 10.2892417055056 10.6509378446556 11.5127992164538 11.5479821976825 11.3403903331277 10.9989003532891 11.0051963700606 11.0838115265899 10.3662801508813 10.4349200825094 11.8215529907350 11.5385935237575 11.5165694949538 11.3663209478387 11.2362977238639 11.5208441743374 11.4897066321225 11.2622550926779 10.1882501872690 0.111753288981472 0.108505243333550 0.109504566738148 0.11032671952705 0.112275688026667 0.121162801253094 0.112263580961723 0.108505243333550 0.120417647829441 0.116277332686124 0.110806396218168 0.109815697967248 0.111384627432384 0.115168161733415 0.109911922717749 0.109806993163349 0.114279753100999 0.125790788456539 0.118339069818510 5 0|5 /|+ 24140346 24140796 24140550.778 24139638 24141138 + gene protein_coding_gene TRUE TRUE AT5G59890.1|AT5G59890.2 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding actin depolymerizing factor 4 (ADF4) mRNA, complete cds Identical to Actin-depolymerizing factor 4 (ADF-4) (AtADF4) (ADF4) [Arabidopsis Thaliana] (GB:Q9ZSK3;GB:Q94A13;GB:Q9FJE7); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.1); similar to Actin-depolymerizing factor 1 (ADF 1) (GB:Q9FVI2); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108)|Identical to Actin-depolymerizing factor 4 (ADF-4) (AtADF4) (ADF4) [Arabidopsis Thaliana] (GB:Q9ZSK3;GB:Q94A13;GB:Q9FJE7); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.2); similar to Actin-depolymerizing factor 1 (ADF 1) (GB:Q9FVI2); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) 0.284191102750830 2.96606077734767 0.0133464492197567 1 3.22002010113595 21.9530746331318 0.284191102750830 0.0873639331439165 AT5G27950_at 8.5967134939286 8.22266559221545 9.48039875545932 9.07866538070795 10.2732672005764 9.52344362923541 8.61465228871752 7.49307296581365 6.99338242698902 8.60138779293227 9.53804902602661 9.10707958600074 9.32883452265328 9.4650775777308 8.75869305873337 9.34975471718875 9.72590984520795 9.13739312775432 8.46636374962583 0.131370266384880 0.126198028335410 0.132830888543288 0.130934573119494 0.128530335349142 0.132803045477612 0.130874003122199 0.144687884571869 0.178873795831021 0.127615245493915 0.129150794626893 0.125022129530085 0.127349360115421 0.127934597002400 0.133002067179580 0.126865578351480 0.130730710443755 0.139168407669642 0.125815832366826 5 5 + 9987032 9987448 9987207.091 9984055 9987994 + gene protein_coding_gene TRUE TRUE AT5G27950.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G55550.1); similar to BY-2 kinesin-like protein 5 [Nicotiana tabacum] (GB:BAB40709.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.515766712340922 2.96234725115434 0.0134337878180193 1 3.21423813535131 17.5712233745873 0.515766712340922 0.252059158704793 AT5G43480_at 2.65201571556357 2.75989976119473 3.04563246975123 2.99833930868916 2.74282257409133 2.85553978772196 2.41739103092928 2.87748344005238 2.9233559420209 2.79222611764997 2.26080709943283 3.13239955021639 3.39613694969850 3.1194443878674 2.81941523928937 2.09773262096781 2.31385013822621 2.99197618113304 2.77641454081571 0.233685435731378 0.230337107956292 0.237605325717919 0.245570608431923 0.230010092377266 0.236604530845959 0.225880271618844 0.226599535484287 0.241381462108047 0.228507307157682 0.226822213973071 0.229760462287671 0.229634044331207 0.234308131033551 0.225344514340380 0.228261264083504 0.232096529149367 0.233756709720321 0.225270312649345 5 5 - 17484626 17484845 17484747.889 17484626 17484871 - gene protein_coding_gene TRUE TRUE AT5G43480.1 unknown protein -0.280680467890931 -2.95985910040065 0.0134926291935721 1 3.21036401174772 5.59220841317394 -0.280680467890931 0.0844722705366491 AT5G51610_at 0.902384248949851 1.05109603545802 0.939240265577883 1.39554837356433 0.659900656141375 1.06686650303539 1.19273474905991 0.973587804887286 1.44367828266223 1.47919328180726 0.704450797349898 0.864430444102681 0.775823334317482 0.896830837595464 0.989018173591918 0.736805881841198 1.04685673774518 1.19140243824494 1.20045678587516 0.21135932094558 0.209135342557532 0.213116433130176 0.208991663704904 0.208991663704904 0.208991663704904 0.211719871527458 0.208991663704904 0.217588278062933 0.208991663704904 0.215068708300853 0.208991663704904 0.212556964804431 0.213862139555714 0.209644645052768 0.212257517056197 0.208991663704904 0.215351182426970 0.213871767027265 5 5|0 +|/ 20982869 20983954 20983360.1 20982803 20984031 + gene protein_coding_gene TRUE TRUE AT5G51610.1 ribosomal protein L11 family protein similar to PRPL11 (PLASTID RIBOSOMAL PROTEIN L11), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G32990.1); similar to 50S ribosomal protein L11, chloroplast precursor (CL11) (GB:P31164); similar to Os03g0122200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048798.1); contains InterPro domain Ribosomal protein L11; (InterPro:IPR000911) -0.314809769936724 -2.95866414913996 0.0135209805243523 1 3.20850341903706 2.16024238660766 -0.314809769936724 0.115309332479060 AT5G63960_at 2.40024901904580 1.90432558947681 3.25542869905324 2.79968516734215 2.44662896498462 2.74620595614587 2.39284341438414 2.13552103101123 1.53274849064625 2.01110906551397 2.20864333790706 3.06027880817703 2.41081594288792 2.23200541825588 2.98543024922111 2.52011231210610 2.48797472607804 2.42414745907435 2.35674131265328 0.228349052134003 0.220057930688835 0.231614563533000 0.219355338645966 0.220432962621069 0.222371021195365 0.218840805663413 0.224107397978864 0.227894855935327 0.218806688247227 0.227744355418564 0.215993952604753 0.215993952604753 0.220978182032677 0.224801510021447 0.215993952604753 0.224563016303992 0.219129996532797 0.227057716379438 5 5|0 +|/ 25622422 25623665 25623164.286 25616823 25623842 + gene protein_coding_gene TRUE TRUE AT5G63960.1 DNA-directed DNA polymerase delta catalytic subunit, putative (POLD1) Identical to DNA polymerase delta catalytic subunit (EC 2.7.7.7) (POLD1) [Arabidopsis Thaliana] (GB:Q9LVN7); similar to ATREV3 (Arabidopsis thaliana recovery protein 3), DNA binding [Arabidopsis thaliana] (TAIR:AT1G67500.1); similar to DNA polymerase delta subunit [Chlorella pyrenoidosa] (GB:BAE48221.1); similar to DNA polymerase epsilon, catalytic subunit A (ISS) [Ostreococcus tauri] (GB:CAL52459.1); similar to DNA polymerase delta catalytic subunit (GB:O48901); contains InterPro domain DNA-directed DNA polymerase B; (InterPro:IPR006172); contains InterPro domain DNA polymerase B, exonuclease; (InterPro:IPR006133); contains InterPro domain DNA polymerase (pol2); (InterPro:IPR004578); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain DNA polymerase B region; (InterPro:IPR006134) 0.339772518965166 2.95771503989153 0.0135435418445993 1 3.20702560509818 4.76413214083945 0.339772518965166 0.135116067669075 AT5G17040_at 2.67134181436515 2.71245542177657 3.22364844216327 2.66677402561337 2.36782118760796 3.03981674757442 2.6398404825939 3.00193292973629 2.55990373606697 3.0572619749407 2.81417228014799 3.01618974967085 2.98049353650759 2.84589598760498 2.43155118518358 2.51420651216159 2.87891301085446 2.68281074146314 2.96428536798857 0.188619939990711 0.193212210269661 0.192848123239581 0.189402972592184 0.191084666645961 0.189569252665739 0.191950795648019 0.18842242710723 0.197259406975531 0.192226171054077 0.192355091731813 0.189365950122597 0.19983108487584 0.198611625066912 0.19229380739372 0.192363439013039 0.198843681461715 0.191876321890266 0.190521408059329 5 5 - 5605552 5605924 5605722.818 5605287 5606973 - gene protein_coding_gene TRUE TRUE AT5G17040.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17050.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G17030.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:BAB41020.1); similar to UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera] (GB:ABF59818.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.378713037546236 -2.95527106362726 0.0136018126794503 1 3.20322017078487 5.60596029065287 -0.378713037546236 0.163670597799434 AT5G59240_at 2.85258629585295 2.62704571153765 3.05845906262766 2.7881458504119 2.46165425289831 2.71369077320826 2.65241489298136 2.86726302604717 2.56766348624951 3.00164051270981 2.84330267550171 3.36288334281248 2.99599317379304 2.91025566464399 2.91793608145424 2.8056027206944 2.83977854337089 2.94746889006278 2.76407650167943 0.181321714912317 0.181321714912317 0.184325668113934 0.184725392960661 0.185537417273918 0.182108587027304 0.181321714912317 0.190775725768289 0.187138323132721 0.181321714912317 0.185074935824319 0.181321714912317 0.182554462390668 0.185328833234707 0.181321714912317 0.182284707875639 0.189642153554621 0.186454820763963 0.182665191329810 5 5 - 23920032 23920434 23920219.909 23919695 23920959 - gene protein_coding_gene TRUE TRUE AT5G59240.1 40S ribosomal protein S8 (RPS8B) Identical to 40S ribosomal protein S8-2 (RPS8B) [Arabidopsis Thaliana] (GB:Q9FIF3); similar to 40S ribosomal protein S8 (RPS8A) [Arabidopsis thaliana] (TAIR:AT5G20290.1); similar to ribosomal protein S8 [Oryza sativa (japonica cultivar-group)] (GB:BAA07207.1); similar to Os02g0489400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046866.1); contains InterPro domain Ribosomal protein S8E; (InterPro:IPR001047) -0.279406446800287 -2.95507918591064 0.0136063982428435 1 3.20292140245192 5.61800555157296 -0.279406446800287 0.0836446637135986 AT5G28080_at 2.57145649310098 2.33513114506472 2.84999999437888 2.51814138113219 2.15195470928366 2.13614369357396 2.40513486813799 2.37940651925744 2.27536708285281 2.59702475645371 2.10212688396623 2.36453616654237 2.83678788198392 2.57506614789863 2.57136115659772 1.94565039288854 2.43713203898312 2.05610837335233 2.27301336407106 0.233206830457248 0.236684295615045 0.237376459274755 0.240266655404718 0.232139893143748 0.237533075429225 0.23323143090846 0.246203855735419 0.250906005816984 0.251720725312884 0.244052398818472 0.240494709645612 0.237627378724846 0.240550912588445 0.244339463692 0.238134316915669 0.238525273139377 0.242250841504233 0.244793837012662 5 5 - 10090327 10090778 10090552 10090074 10092406 - gene protein_coding_gene TRUE TRUE AT5G28080.1|AT5G28080.2 WNK9 (Arabidopsis WNK kinase 9); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. similar to WNK1 (WITH NO LYSINE (K) 1), kinase [Arabidopsis thaliana] (TAIR:AT3G04910.2); similar to mitogen-activated protein kinase kinase [Oryza sativa (indica cultivar-group)] (GB:ABH07431.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to WNK1 (WITH NO LYSINE (K) 1), kinase [Arabidopsis thaliana] (TAIR:AT3G04910.1); similar to mitogen-activated protein kinase kinase [Oryza sativa (indica cultivar-group)] (GB:ABH07431.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.267131149998506 -2.95276681800039 0.0136617828327005 1 3.19932084726424 4.78987003285913 -0.267131149998506 0.070696959521052 AT5G51030_at 1.87011315816977 1.45106850420763 3.4351716969586 3.13710723136353 2.94669143055523 2.86250043513010 2.83946067088217 3.05050484676618 2.03205045165122 2.47624745663291 2.47089077924923 1.98696927001298 2.60863489650257 3.26174019479443 2.24064238964224 2.72704495136029 3.07719184779818 2.68173917716197 2.22925104293015 0.210317927781192 0.198770606854883 0.202043301068532 0.203516618438921 0.216309440513746 0.214938363940691 0.206806314618297 0.200772853378776 0.202856307315974 0.202286098315706 0.205111833621451 0.199163143146304 0.206137046984503 0.207197167423891 0.218980681050396 0.198770606854883 0.210852379972025 0.207987887141728 0.203872479112431 5 5 - 20765112 20765703 20765361.455 20764985 20766732 - gene protein_coding_gene TRUE TRUE AT5G51030.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G61830.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE80213.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.292666731743674 2.94537288852511 0.0138404087054639 1 3.18780763138384 5.13793041611415 0.292666731743674 0.0972912974496637 AT5G62610_at 8.76976574392535 8.8104990879127 9.46016448334132 9.22196017112607 9.39373557487741 9.12706234216632 8.28209149772564 8.25984504846847 8.50779931803735 8.3372291185353 8.72516883567436 8.77959853704956 8.81060443405435 8.79614317854341 8.49615629907528 8.8164800673942 8.38331727457376 8.75202376922139 8.23516293211519 0.11988376051847 0.116891803187748 0.124282214503679 0.124224495602172 0.122559788860250 0.121075173486390 0.127356297241817 0.129146721455250 0.119648773583057 0.125723921042067 0.121747841419803 0.117434528980905 0.117667715563785 0.119695134920867 0.120069464811463 0.116047468591349 0.143659710141861 0.125388618414306 0.122529244473423 5 5|0 -|/ 25150345 25151069 25150629.333 25150125 25152014 - gene protein_coding_gene TRUE TRUE AT5G62610.1 basic helix-loop-helix (bHLH) family protein similar to ZCW32 (BIGPETAL, BIGPETALUB), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G59640.1); similar to bHLH transcription factor [Gossypium hirsutum] (GB:AAV51936.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.259519358620003 -2.94472989623721 0.0138560532667434 1 3.18680640201706 17.4431406631984 -0.259519358620003 0.0623981503052812 AT5G45260_at 5.70085706559133 6.07060286876858 6.78960069123346 6.79388688509382 7.55734814315678 7.08861696943243 5.36514433323302 5.17080533944874 5.68172324011529 5.4469911196783 6.81699897385537 6.76226138085363 6.4221012919718 7.05790949483221 6.03165536472072 6.83497250347968 6.83649428723818 6.09996199325612 5.06680592847253 0.158599968028183 0.158119673052079 0.15437125921742 0.155908680882107 0.154957166579064 0.161144796598024 0.155704922891924 0.158451205028917 0.166507310264572 0.158741865922175 0.154404958251755 0.15459671042452 0.15482022264796 0.157368584288784 0.153450636693659 0.154940061877787 0.162397412192188 0.155891525111676 0.162517232680033 5 5 + 18346942 18349663 18348186 18343430 18349836 + gene protein_coding_gene TRUE TRUE AT5G45260.1|AT5G45260.2 SLH1 (sensitive to low humidity 1); transcription factor|SLH1 (sensitive to low humidity 1) identical to R gene RRS1-R conferring resistance to Ralstonia solanacearum. Single amino acid insertion in the WRKY C-terminal domain that impairs DNA binding activity results in constitutive activation of defense responses which are suppressed under conditions of high humidity. Identical to Probable WRKY transcription factor 52 (WRKY DNA-binding protein 52) (Disease resistance protein RRS1) (Resistance to Ralstonia solanacearum 1 protein) (Disease resistance protein SLH1) (SENSITIVE TO LOW HUMIDITY 1 protein) (WRKY52) [Arabidopsis Thaliana] (GB:Q9FH83;GB:Q689Y9;GB:Q8GZ83;GB:Q9FH84); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657); contains InterPro domain ValRS-IleRS-LeuRS editing; (InterPro:IPR009008); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable WRKY transcription factor 52 (WRKY DNA-binding protein 52) (Disease resistance protein RRS1) (Resistance to Ralstonia solanacearum 1 protein) (Disease resistance protein SLH1) (SENSITIVE TO LOW HUMIDITY 1 protein) (WRKY52) [Arabidopsis Thaliana] (GB:Q9FH83;GB:Q689Y9;GB:Q8GZ83;GB:Q9FH84); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to LIM domain-containing protein / disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT5G17890.1); similar to TTR1 (WRKY domain family protein 16), transcription factor [Arabidopsis thaliana] (TAIR:AT5G45050.1); similar to TIR [Medicago truncatula] (GB:ABD33387.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.305412393894670 2.94455876580342 0.0138602200221017 1 3.18653992751707 12.3202583740104 0.305412393894670 0.108653923241525 AT5G49460_at 7.57620333862051 7.52540298270202 7.21690146582617 7.33602590684007 8.34978884444534 8.21244727208105 8.22954910858098 8.33327425561227 7.57727812725657 7.65889823250937 9.45040709912948 9.6719789685543 9.08799980891031 9.0830219723605 9.3447489518297 8.7839046697138 8.27542656749148 9.05878125559405 7.69361924430457 0.19152081553201 0.180494528879049 0.190580108125855 0.190878683236904 0.175541506199989 0.179684123493495 0.176927891868943 0.178246719119478 0.194511625598748 0.185419044828256 0.181175685730726 0.179118199028504 0.179126123557286 0.185081222836808 0.173799093122901 0.173799093122901 0.200103617697577 0.179003435688862 0.181592188658056 5 5 + 20074623 20075378 20075073 20071749 20075690 + gene protein_coding_gene TRUE TRUE AT5G49460.1 ACLB-2 (ATP-citrate lyase B-2) One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL) similar to ACLB-1 (ATP-citrate lyase B-1) [Arabidopsis thaliana] (TAIR:AT3G06650.1); similar to ATP citrate lyase a-subunit [Lupinus albus] (GB:CAC86995.1); similar to ATP:citrate lyase [Capsicum annuum] (GB:AAK13318.1); similar to ATP citrate lyase [Cyanophora paradoxa] (GB:CAB46077.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) -0.242770179739221 -2.93964905047223 0.0139803033257117 1 3.17889474061044 16.2163485783659 -0.242770179739221 0.0372742722128988 AT5G08100_at 8.21948541060044 8.1686094239119 8.97049631516727 8.73478266041888 9.40612182014279 9.03416626747277 7.37020663256665 7.28558819669549 7.3728363258452 7.35970656439586 8.44900523332635 8.30328805470133 8.32902816881541 8.36668972100653 8.4980673648809 8.12119546379315 8.39768790083543 8.60416759508349 7.22703625456751 0.141161825464928 0.140753818982088 0.142850229363508 0.142288601816322 0.145344379001381 0.150647453284020 0.149866683124244 0.153480945727024 0.161019265706268 0.152338730528240 0.142560133107951 0.143104849286476 0.140042554474523 0.152471543675595 0.14085714458294 0.140428643462844 0.15331736960017 0.142939884348516 0.148740094735361 5 5 - 2593287 2593850 2593477.727 2593051 2594652 - gene protein_coding_gene TRUE TRUE AT5G08100.1|AT5G08100.2 L-asparaginase / L-asparagine amidohydrolase Identical to L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 1) [Contains: L-asparaginase 1 subunit alpha; L-asparaginase 1 subunit beta] [Arabidopsis Thaliana] (GB:P50287;GB:Q9LEZ6); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to L-aspara (GB:Q9ZSD6); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) 0.272601088947644 2.9394044500753 0.0139863131869259 1 3.17851385714518 16.2504325422428 0.272601088947644 0.0780974254326951 AT5G53820_at 2.81176357697192 2.88853979908191 3.1407740249842 3.75384615768523 2.61429725240524 2.64153066138082 2.23534611831609 2.70389255587431 3.07893638359849 3.86765768533206 3.17072936928827 3.35966047010019 3.52308920694845 3.34218871200451 2.91910075127208 3.01860462346826 3.61905499010776 3.74825762864064 3.38793629864146 0.186146244850254 0.180663790768786 0.178130267192233 0.176648133915852 0.190162393846495 0.178413532764873 0.201556277384304 0.181384631974178 0.185057067579830 0.180029962389913 0.178852787358249 0.179282252217615 0.185287658847827 0.173714311710211 0.193000970161709 0.173714311710211 0.178653433348316 0.181246401610469 0.178578818081334 5 5|0 +|/ 21870701 21871068 21870899.1 21870623 21871343 + gene protein_coding_gene TRUE TRUE AT5G53820.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38760.1); similar to pollen coat protein [Brassica oleracea] (GB:CAA63531.1); contains InterPro domain Late embryogenesis abundant protein; (InterPro:IPR004238) -0.336434711724604 -2.93822096950297 0.0140154282470235 1 3.17667097788382 6.23996335575551 -0.336434711724604 0.134274077267741 AT5G03980_at 2.36266931888701 2.19218066329754 2.23528891668981 2.11270172114513 2.07795022170629 2.25216909312084 2.30636362104318 2.07282297086579 2.50598527383405 2.34940663481212 2.60732613752657 2.21247996848975 2.64403935838358 2.34358603801202 2.26066356958887 1.97070477010131 2.38202698983214 2.57071541366196 2.26625676219673 0.20608456803394 0.210686385679273 0.207937836152168 0.215012625136884 0.202290181948181 0.204912872990344 0.208683426972112 0.208785688234485 0.211570577282917 0.219474402126296 0.206807645375015 0.214153450307784 0.205344391349538 0.206436381014955 0.209010631078713 0.203853212870589 0.203570927616978 0.210209944775715 0.206447381345102 5 5 - 1074315 1074758 1074569.364 1074204 1075288 - gene protein_coding_gene TRUE TRUE AT5G03980.1 GDSL-motif lipase/hydrolase family protein similar to lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28590.1); similar to GDSL-like Lipase/Acylhydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93963.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.258717285070448 -2.93781918629536 0.0140253264852091 1 3.17604533230977 4.57543115133469 -0.258717285070448 0.0621522765686190 AT5G51990_at 2.29797041451406 2.28031142165632 2.31101979263463 2.37819966275628 2.28185004855254 2.23026708482596 2.45848976450124 2.20952437200483 2.06252010976912 2.06910830905552 1.78591512639235 2.12366493834699 1.92513060479999 1.75428424695288 2.13864200222615 1.97857367693904 2.35185210321717 2.22730608392182 2.19377323592686 0.209522393227881 0.208720942098692 0.212064345832867 0.21098561825071 0.214073681125628 0.210196049156403 0.217589205293245 0.221602396384753 0.209919892153283 0.209132776840223 0.210269212742798 0.207265241876988 0.22351626927874 0.215792199928684 0.222934116236101 0.208964847276329 0.210428005003209 0.207144287961245 0.214040582138367 5 5 - 21134347 21134913 21134597.091 21134339 21135013 - gene protein_coding_gene TRUE TRUE AT5G51990.1 CBF4/DREB1D (C- REPEAT-BINDING FACTOR 4); DNA binding / transcription factor/ transcriptional activator encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF4). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to drought stress and abscisic acid treatment, but not to low temperature. Identical to Dehydration-responsive element-binding protein 1D (DREB1D protein) (C- repeat-binding factor 4) (C-repeat/dehydration-responsive element- binding factor 4) (CRT/DRE-binding factor 4) (DREB1D) [Arabidopsis Thaliana] (GB:Q9FJ93;GB:Q6J9R8); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to dehydration responsive element binding protein [Brassica napus] (GB:AAD45623.1); similar to DREB1 [Thellun (GB:AAS00621.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.246751658046348 -2.93222526718626 0.0141638710812969 1 3.16733458240378 4.37802322823075 -0.246751658046348 0.0456121486906187 AT5G06300_at 3.42542140477977 3.63304247461876 4.26898646830112 4.54052461968959 6.80817176869497 6.02443223871075 4.52039460157644 3.8596375844722 2.43971485814133 2.96831747550416 3.19689048297871 3.27449633009045 5.33945202928201 3.76682394749508 2.96150364748041 2.73849463489309 4.56856669623383 2.97312827340031 3.23068032338993 0.253565265991486 0.255544425534852 0.246060753262341 0.248295521037995 0.252745211862362 0.255025593109952 0.251710835368471 0.260963608044829 0.251476792998511 0.249190886571315 0.246060753262341 0.246060753262341 0.260404004545878 0.258229022216848 0.255118627182051 0.248842665842652 0.262746165552436 0.246060753262341 0.249458839530422 5 5|0 -|/ 1922255 1924008 1922791 1921745 1925371 - gene protein_coding_gene TRUE TRUE AT5G06300.1 carboxy-lyase similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABD32794.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) 0.409548263139295 2.93170691751684 0.0141767786558904 1 3.16652741314570 7.87607159056055 0.409548263139295 0.187002117247573 AT5G14020_at 0.98848528425768 0.82233797744539 0.997325305552804 1.03107014528497 0.842348507073819 1.17250028122451 1.20260809629696 0.838112774471334 1.34652905158846 1.03605799487189 0.811173960075307 0.582301776318767 0.496424425311526 1.16430754322270 0.638599968945915 0.651163056081309 1.30282367382905 0.671929638460586 1.43337790879662 0.240397164098072 0.238321879105984 0.244080319157756 0.245949818784737 0.244774238154022 0.240689667663012 0.246037712769252 0.242148162042698 0.241829321378051 0.237659294997648 0.244750797028088 0.240062366500568 0.245809921253379 0.245025204760979 0.238134631369866 0.240618500256315 0.245160861542341 0.247454579673253 0.241973362926493 5 5|0 -|/ 4523761 4524763 4524149.4 4523522 4525865 - gene protein_coding_gene TRUE TRUE AT5G14020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73390.3); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23062.1); similar to Os11g0514800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067969.1); similar to Os04g0527400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053367.1) -0.283537902842881 -2.93092855980552 0.0141961830288462 1 3.16531536061034 2.01776295830075 -0.283537902842881 0.0900218111134089 AT5G60020_at 2.04379506955190 1.80179509071456 2.21799141795086 2.10810911929749 1.86507428493629 1.94524902328193 1.99654055045589 1.87453708125872 2.41558976849385 2.35538124438568 3.22923061443046 3.94236416013699 2.88575800948931 3.09116648291661 4.35687247817159 2.94721641550439 3.08027813652787 3.54980731840503 2.59581653073476 0.193548012107511 0.198251992356066 0.205148244938079 0.194865882550632 0.196068501549087 0.191474370540760 0.206910255604648 0.192830188878157 0.190658259027268 0.190688404488715 0.191892082032307 0.194299572539814 0.196618257171502 0.194164432936782 0.210249425096734 0.191139640469715 0.194493286840567 0.196717437051226 0.194145347814815 5 5 + 24186780 24187425 24187102.636 24185222 24187688 + gene protein_coding_gene TRUE TRUE AT5G60020.1 LAC17 (laccase 17); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to LAC2 (laccase 2), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G29130.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17194.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17192.1); similar to laccase [Liriodendron tulipifera] (GB:AAB17193.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.250943849107134 2.92985456475026 0.0142230015512668 1 3.16364294174917 4.90210272959056 0.250943849107134 0.0524760823870754 AT5G62520_at 1.60464688706183 1.82180396444226 2.57530231976265 2.64187074222750 2.17563714895590 2.15012764862631 1.99129571948528 1.32876762332533 1.42575274457513 1.74954333152412 1.74057213892488 1.62289802385050 2.11410937215174 1.83215524202413 1.53459456503469 1.58209654163151 2.14547301167129 1.88953595883314 1.53989949713135 0.230887674213218 0.223335314683582 0.241841414282699 0.223896892216261 0.224220004031257 0.234870319200344 0.22238434378661 0.230712355857044 0.236594394741004 0.231779704532393 0.225314718547058 0.222116824185134 0.222116824185134 0.234016887640623 0.222116824185134 0.222116824185134 0.234205987343286 0.226014531714085 0.234921585524169 5 5|0 +|/ 25115627 25116437 25115995.889 25115224 25117133 + gene protein_coding_gene TRUE TRUE AT5G62520.1|AT5G62520.2 SRO5 (SIMILAR TO RCD ONE 5); NAD+ ADP-ribosyltransferase Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to SRO4 (SIMILAR TO RCD ONE 4), NAD+ ADP-ribosyltransferase [Arabidopsis thaliana] (TAIR:AT3G47720.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93110.1); contains InterPro domain PARP, catalytic; (InterPro:IPR012317); contains InterPro domain Poly(ADP-ribose) polymerase, catalytic region; (InterPro:IPR001290) 0.318996710713764 2.92966546973517 0.0142277286881181 1 3.16334848384739 3.72588711399027 0.318996710713764 0.121284378558850 AT5G18950_at 3.84435248045597 4.07839799887330 4.62146408639939 4.69535871606618 4.78477818533025 4.7437162880218 4.0009502864444 4.32746392989963 3.88061904438298 3.92836137942651 4.34158974847677 4.58035754979963 4.33067648223015 4.7394461413262 4.07046667212499 4.35202505964904 4.60847084744182 4.20060186659344 4.1024797123342 0.183739288465197 0.185519171548721 0.191706990632224 0.190408631845805 0.186396529578897 0.185249632637487 0.181617243336120 0.1772593542572 0.184649662401769 0.178647173591938 0.176780309588965 0.179224912674627 0.176885630212740 0.182211270037468 0.182551767185198 0.182674836972480 0.179290628140867 0.175481648843166 0.180942140331023 5 5 - 6328542 6328958 6328758.909 6328381 6329972 - gene protein_coding_gene TRUE TRUE AT5G18950.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62670.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96889.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) -0.264653698986836 -2.92206289641859 0.0144191001487435 1 3.15150974979349 8.57378075043794 -0.264653698986836 0.0710441477550896 AT5G49590_at 1.94087588578326 1.75926645231618 1.8383316459504 1.98776644208041 2.10336503775077 2.16405869701371 1.92768938941013 1.83207336750797 2.46975223240425 2.14898542674776 2.01937740336778 1.85280140058520 2.01489329046104 1.93725332481826 1.86579961227214 1.78784484275646 2.29643889648368 2.05887250827892 2.21732509251222 0.136478769906985 0.134236596702887 0.13483628873077 0.134964099738641 0.138814472481762 0.131277599924053 0.133769671387420 0.131295289498380 0.135164788108379 0.132991035152292 0.131277599924053 0.132553286652140 0.136517476683705 0.132652263048684 0.138751137764915 0.137860373132225 0.140710620605687 0.141400506547344 0.137264272362764 5 0|5 /|+ 20146666 20146669 20146667.5 20145962 20146780 + gene protein_coding_gene TRUE TRUE AT5G49590.1 unknown protein -0.245392094753367 -2.91917591826988 0.0144924482710923 1 3.14701413537553 4.07310223660961 -0.245392094753367 0.0451731973153148 AT5G06580_at 6.97110176743601 7.05904738896803 7.48864212621936 7.59369157508698 8.17796442675428 7.49024230078092 7.09139628106647 6.88177503777658 6.65995826419037 6.88554854395217 7.52926024861917 7.50221717492419 7.32339642948635 7.30581042374758 7.47901266121315 7.67314222367484 7.17445400803384 7.58588954149319 6.71066616769627 0.195741930587201 0.176664718182878 0.197270126227585 0.175493754283436 0.182925111355652 0.183296547103226 0.173254482892722 0.175424946364342 0.191485784772884 0.178639647228810 0.178233418324715 0.18015561723977 0.178274485769061 0.183420091156988 0.177191424640867 0.180170367545596 0.18429536272237 0.177237004459750 0.180722355006639 5 5|0 -|/ 2011491 2013376 2012394.111 2011289 2016540 - gene protein_coding_gene TRUE TRUE AT5G06580.1 FAD linked oxidase family protein Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. similar to FAD linked oxidase family protein [Arabidopsis thaliana] (TAIR:AT4G36400.2); similar to Putative FAD-binding oxidase [Burkholderia xenovorans LB400] (GB:YP_557074.1); contains InterPro domain FAD linked oxidase, C-terminal; (InterPro:IPR004113); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094) -0.324451648701685 -2.91841476763872 0.0145118489834018 1 3.14582886870333 14.4435853617671 -0.324451648701685 0.126658117001684 AT5G47940_at 3.70647280949029 4.44211517029878 4.67919863424223 5.42349992305886 5.26319149126209 4.52018739128072 3.27118529489383 3.63034525630359 2.88856485018413 2.77377162803571 4.20099973474501 4.56703654985908 4.08127066849607 4.53813537427917 3.96335144806909 4.43324406058808 3.82319783127383 3.84182383744895 3.25201120765013 0.224508251699509 0.221757457304284 0.228752342238898 0.232163332088408 0.228722407384273 0.2320942276687 0.230162383061090 0.221757457304284 0.246770789954129 0.225542372621324 0.225902109300824 0.227984418507913 0.228252306502988 0.221757457304284 0.221792986994618 0.224125172924372 0.235343393914623 0.223130190354312 0.221757457304284 5 5 - 19426663 19427208 19426879.727 19426468 19429119 - gene protein_coding_gene TRUE TRUE AT5G47940.1 similar to hypothetical protein AaeL_AAEL003671 [Aedes aegypti] (GB:EAT44992.1); similar to Os07g0569000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060035.1) 0.47390250999704 2.91642590144551 0.0145626660505476 1 3.14273180030887 7.94331532971291 0.47390250999704 0.2306374669915 AT5G48150_at 9.19500590312092 9.42117917390642 10.2285153509961 10.2610199605091 10.5194576722156 10.5827245132213 9.7061330415871 9.81010936441498 9.66208490822844 9.80234176361963 10.5685156911509 10.6997883893033 10.9797062016226 10.6886481032660 10.5869331020189 11.1212170762045 11.0232022531729 10.7022443854196 10.1362272519921 0.085827645330219 0.0810349074129865 0.082799127921909 0.0830049518000119 0.0832198877304293 0.0851991890787031 0.0809000681619924 0.0799082132530014 0.0924753640720486 0.0812267213124039 0.084566487311661 0.0799082132530014 0.0827097278083036 0.0811413261969218 0.0836721985418567 0.0799082132530014 0.0825806776443281 0.0877737999957321 0.0824791773693186 5 5|0 -|/ 19539724 19540367 19540076.9 19539481 19541924 - gene protein_coding_gene TRUE TRUE AT5G48150.1|AT5G48150.2 PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. similar to SCL21 (SCARECROW-LIKE 21), transcription factor [Arabidopsis thaliana] (TAIR:AT2G04890.1); similar to GRAS7 [Solanum lycopersicum] (GB:ABD72963.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.244825747520705 2.91504173872128 0.0145981381738239 1 3.14057638007282 20.2971013932714 0.244825747520705 0.0448023340914513 AT5G03080_at 6.9141715474272 7.08038775573128 7.99379281847734 7.98633884520697 7.9308142372418 7.80519775166502 6.84300532197318 7.23096714838264 6.80646579563946 6.35498209396254 8.14283490196685 7.9775021886082 8.280410724702 8.01358003731935 8.07614189117404 7.90558843695148 7.96570589948014 7.91423752968343 6.0601420285697 0.152268286432732 0.145567638818553 0.147090293626513 0.144410460014805 0.14033250257924 0.149819770089096 0.148855869943162 0.148752288553168 0.156381269319138 0.165018071131557 0.145155043284825 0.14033250257924 0.145257035377719 0.144234490520881 0.143583424413435 0.143056591808322 0.149762966564454 0.14033250257924 0.166775401417564 5 5 + 722084 722566 722293.909 721866 723399 + gene protein_coding_gene TRUE TRUE AT5G03080.1 phosphatidic acid phosphatase-related / PAP2-related similar to PREDICTED: similar to Dolichyldiphosphatase 1 (Dolichyl pyrophosphate phosphatase 1) (Protein 2-23) [Rattus norve (GB:XP_231129.3); similar to Os03g0288700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049787.1); contains InterPro domain Phosphoesterase, PA-phosphatase related; (InterPro:IPR000326); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase; (InterPro:IPR008934) 0.268455757420384 2.91333304499506 0.0146420470885875 1 3.13791560304199 14.6939328485763 0.268455757420384 0.0762182072198007 AT5G38470_at 9.35968153448274 9.45135006451885 10.3799694947618 10.3156851206062 10.1111403812387 10.0045381636285 9.13282878155766 9.48630234463004 9.21485904721336 9.2473685260198 10.4131592945232 10.2798559810377 10.4113590619263 10.0882202439709 10.4383675034786 10.2946174323604 10.1221765763871 10.0170141514833 9.15105296457988 0.103348230432297 0.101777366835249 0.104689120825319 0.105076422591705 0.103845704524578 0.112742686344265 0.104082603068447 0.106184403698372 0.122904724784524 0.106071473271376 0.101787945217250 0.103965870140281 0.103574675615449 0.112475894436537 0.104710988150925 0.100061607583094 0.106134504795927 0.108494485020398 0.109206215903117 5 0|5 /|+ 15423701 15424457 15424035.143 15421872 15424941 + gene protein_coding_gene TRUE TRUE AT5G38470.1|AT5G38470.2 DNA repair protein RAD23, putative Identical to Putative DNA repair protein RAD23-4 (RAD23-like protein 4) (AtRAD23- 4) (RAD23-4) [Arabidopsis Thaliana] (GB:Q84L30;GB:Q94C35;GB:Q9FF16); similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT3G02540.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96879.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain UV excision repair protein Rad23; (InterPro:IPR004806); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Heat shock chaperonin-binding; (InterPro:IPR006636); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.259882565859162 2.90918936652445 0.0147490815975333 1 3.13146309078427 19.5114485489699 0.259882565859162 0.0667648375485122 AT5G67100_at 2.12025079926916 2.16364342557160 2.69599288757165 2.73091449518652 1.86676710414451 2.19275028560474 2.36301499449803 2.61034578515553 2.2218600832322 2.47131575758563 3.33464503668894 4.11254552536473 2.77778143587768 3.74282516172142 3.74808990005605 3.10679057631016 3.06959871971145 3.57856731664944 2.34133047817703 0.204090030984401 0.200212914293809 0.201447117425060 0.200536726998478 0.202164614446390 0.200924825506154 0.203418430260681 0.200212914293809 0.21049045228676 0.210037885586778 0.210011387435199 0.207783398210074 0.205496583782600 0.201185969126824 0.200212914293809 0.211283309589208 0.203179697396791 0.206322089247852 0.204453400220447 5 5|0 +|/ 26801162 26802281 26801836.3 26794220 26802330 + gene protein_coding_gene TRUE TRUE AT5G67100.1 DNA-directed DNA polymerase alpha catalytic subunit, putative Identical to DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (POLA) [Arabidopsis Thaliana] (GB:Q9FHA3); similar to DNA-directed DNA polymerase delta catalytic subunit, putative (POLD1) [Arabidopsis thaliana] (TAIR:AT5G63960.1); similar to DNA polymerase alpha catalytic subunit [Oryza sativa] (GB:BAA24573.1); similar to DNA polymerase alpha catalytic subunit (GB:O48653); similar to putative DNA polymerase alpha catalytic subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD81999.1); contains InterPro domain DNA-directed DNA polymerase B; (InterPro:IPR006172); contains InterPro domain DNA polymerase B, exonuclease; (InterPro:IPR006133); contains InterPro domain DNA polymerase (pol2); (InterPro:IPR004578); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain DNA polymerase B region; (InterPro:IPR006134) 0.263549111048513 2.9058492035769 0.0148359336425457 1 3.12626183916660 5.23230542148143 0.263549111048513 0.0714654987222731 AT5G65750_at 5.72557760695649 5.77801821111303 6.83625666637414 6.86460561116056 7.06339661450733 6.50379580677657 4.41199541248387 4.28544991138175 3.84811835355873 4.53937955532469 4.90164480800182 5.08398792793615 5.21384104584168 5.19206751830578 4.89289057346789 5.17983226185488 5.28589637284032 4.98198929026544 4.64287035693678 0.231562186351903 0.230574335169792 0.233370540148507 0.232667451496786 0.231510598973902 0.230984331260524 0.232505660111455 0.230943365402137 0.239011094895647 0.230800649921219 0.227652055326555 0.230470973235615 0.234339492801580 0.227652055326555 0.231147436635256 0.227652055326555 0.241655521591455 0.237557582562675 0.227652055326555 5 5|0 +|/ 26324421 26325072 26324709.2 26320932 26325415 + gene protein_coding_gene TRUE TRUE AT5G65750.1 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative similar to 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G55410.1); similar to hypothetical protein AN5571.2 [Asper (GB:XP_663175.1); similar to Predicted 2-oxoglutarate dehydrogenase, E1 subunit (ISS) [Ostreococcus tauri] (GB:CAL52875.1); similar to hypothetical protein DDBDRAFT_0219311 [Dictyostelium discoideum AX4] (GB:XP_636906.1); contains InterPro domain 2-oxoglutarate dehydrogenase, E1 component; (InterPro:IPR011603); contains InterPro domain Transketolase, central region; (InterPro:IPR005475); contains InterPro domain Dehydrogenase, E1 component; (InterPro:IPR001017) 0.291316317218581 2.90418686674475 0.0148793499079194 1 3.12367328626204 10.6511243868047 0.291316317218581 0.0998212704377594 AT5G14500_at 5.61749404123337 5.2996478264534 7.05804224009239 6.81587841543385 7.4138829765349 6.84301976582288 6.91838023225601 6.40371509172039 4.82298169052562 5.04801800228362 6.5718195533712 6.96761185629177 6.31317603809355 6.70027737138905 6.32203137694774 6.79093105395036 7.23640426879103 6.80245420069086 4.82628646648219 0.237042879923496 0.238590741263441 0.234549897851791 0.240817805167676 0.229973647386089 0.234727567694404 0.237187567262329 0.231819335735566 0.233157274617568 0.237449436917838 0.229973647386089 0.229973647386089 0.235398810799646 0.234214005661812 0.235171780553007 0.229973647386089 0.238355535269137 0.236907672789999 0.243537476905191 5 0|5 /|- 4674521 4675369 4674922.667 4674236 4676768 - gene protein_coding_gene TRUE TRUE AT5G14500.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G01590.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE86317.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) 0.353187730164333 2.90406046473299 0.0148826564518358 1 3.12347645633739 12.3523493743790 0.353187730164333 0.149913145724043 AT5G59110_at 2.36767186011214 2.81392907335284 2.29373871686356 2.54592570937789 1.12998206447137 1.59398843006568 1.69115969533781 2.36688041824267 2.31257215945552 2.40251083358138 2.37100219848849 1.93731437472690 2.97151060651796 2.59357667503273 2.80180643886975 2.50175006513936 2.44645217328159 2.05679600125275 2.35617147522960 0.444605372420929 0.431348365680111 0.431348365680111 0.431348365680111 0.46210194244485 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.437801379617551 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 0.431348365680111 5 5 - 23880827 23880930 23880868.667 23880756 23881274 - gene protein_coding_gene TRUE TRUE AT5G59110.1 subtilisin-like serine protease-related similar to subtilase [Arabidopsis thaliana] (TAIR:AT5G59090.3); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains domain SUBTILISIN/KEXIN-RELATED SERINE PROTEASE (PTHR10795); contains domain SUBTILISIN-LIKE PROTEASE (PLANT) (PTHR10795:SF17) -0.377178320082492 -2.90338082115957 0.0149004478930452 1 3.12241813405778 4.50896494068759 -0.377178320082492 0.167304052798029 AT5G37140_at 1.60012948067791 2.39356117437477 1.88226518622350 2.72820880172905 2.14673471717356 2.13023294950071 2.23904938751675 2.55901968447441 2.69039092245207 2.79172384643901 2.11906452522206 2.01225005142927 2.30760411329368 2.47273760117167 2.09633340091941 2.15641280931689 2.1245877659295 2.90482425712945 2.58334207127807 0.206708852371131 0.196044622956389 0.205720610355173 0.204576871384348 0.200369252316313 0.204139062403134 0.194605110838487 0.200771245213787 0.199819467208379 0.195760149546809 0.202559552403551 0.199687430775717 0.200743305909835 0.210977496628248 0.194605110838487 0.197474991161219 0.199280219490339 0.200223267351525 0.204730131147488 5 5 + 14709385 14710032 14709768.727 14707666 14710081 + gene protein_coding_gene TRUE TRUE AT5G37140.1 tRNA-splicing endonuclease positive effector-related similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G37150.1); similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G52090.1); similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G37160.1); similar to putative helicase [Oryza sativa (japonica cultivar-group)] (GB:AAM76346.1); similar to Os04g0599600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053752.1); similar to OSJNBa0088A01.10 [Oryza sativa (japonica cultivar-group)] (GB:CAD41371.2); contains domain DNA2/NAM7 HELICASE FAMILY (PTHR10887); contains domain no description (G3D.3.40.50.300); contains domain SPLICING ENDONUCLEASE POSITIVE EFFECTOR SEN1-RELATED (PTHR10887:SF22); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) -0.435593182576970 -2.89199843709177 0.0152016114524574 1 3.10469411436265 4.69125638717943 -0.435593182576970 0.208227822155661 AT5G65960_at 8.92764997948634 9.10105267188472 9.62955108742916 9.61046663388096 9.92324929664416 9.69307355258794 8.05164746975151 8.32394675511056 8.1243932818914 7.86599474171013 9.22409604469015 9.2305320283297 9.08911710137492 9.1178755135271 9.17590103269555 9.16091663258075 8.47828412753303 8.96166693341769 8.19422249702018 0.135000751469701 0.13134330949613 0.134875608372483 0.135259719686135 0.132928482098630 0.145371491975391 0.139387988059323 0.138523673741483 0.140841040419675 0.156517757948261 0.132835428642833 0.131644474828650 0.133221643836714 0.140288539777392 0.135675891355925 0.13134330949613 0.164801985764536 0.133618778910329 0.141356917493755 5 5 + 26403679 26404315 26403995.091 26402574 26404673 + gene protein_coding_gene TRUE TRUE AT5G65960.1 similar to hypothetical protein DDBDRAFT_0189734 [Dictyostelium discoideum AX4] (GB:XP_647509.1); similar to Os04g0584800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053672.1); contains domain RAS-RELATED GTPASE (PTHR11708); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 0.259687979121247 2.88920012534301 0.0152765841057657 1 3.10033685095269 17.7157474393348 0.259687979121247 0.068692126524823 AT5G62400_at 1.66736874808379 1.37816043361780 1.80608685428272 2.19341424046880 1.66439655764441 1.87051492420579 1.67331110582823 1.76450480597389 2.67875890965953 2.26234322380706 1.75752646716404 1.60831541981885 2.02563963837476 1.71254860785391 2.29029631338191 2.00082789182451 2.21009534516599 2.32022566215978 2.50317024080524 0.188565137193232 0.188220572618281 0.189910673850173 0.189492369808343 0.187070012669061 0.188525576921794 0.194091204921820 0.189323182115392 0.186659980581893 0.185153104982403 0.190366473349236 0.189473687367605 0.191493086662029 0.188692717241358 0.193604453230104 0.186004342245227 0.196188510349976 0.203412084718273 0.187940824653536 5 5|0 -|/ 25071854 25072554 25072090 25071840 25072832 - gene protein_coding_gene TRUE TRUE AT5G62400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G47410.1) -0.281749248861633 -2.88831806621241 0.0153002933018825 1 3.09896340390366 3.9882739802508 -0.281749248861633 0.0922991596389422 AT5G58790_at 2.90774222072622 3.09102748882629 3.74186401731617 3.5238158541333 3.37563562881101 3.24204416352067 3.15406594964390 2.91328505964402 3.26341734305303 3.33825559383767 3.33169828877157 3.39373742621177 3.09301953468716 3.37870258910955 3.17224946343422 3.57675315965017 3.70072952002164 3.44610415062942 3.3157947168124 0.153389413402073 0.152987643902678 0.161121524993791 0.152326327875619 0.150830482978504 0.149567260716566 0.150265607795292 0.152004352286786 0.15429947861451 0.152154651353709 0.152348806290276 0.148945907663415 0.150588906705122 0.156341993133429 0.149611851640254 0.150746665538384 0.154812123283961 0.156186374090382 0.154044662503600 5 5|0 +|/ 23762557 23762685 23762655.5 23762232 23763018 + gene protein_coding_gene TRUE TRUE AT5G58790.1 unknown protein -0.25921696185045 -2.88517272359666 0.0153851397005898 1 3.09406586307052 6.5899084567271 -0.25921696185045 0.0685612368257835 AT5G18390_at 4.92679584671016 5.57759874714448 5.89224536884022 6.37842039340004 6.81359766051275 6.7478860803125 5.15784249771196 5.22522841068277 4.64432240913458 4.79706492688361 5.84948381788021 5.58234366753239 5.93757503119549 6.28534702935383 6.30223975544152 6.45798847930769 6.36624506532679 6.19582492076076 4.62412874747132 0.251821599418818 0.242760697045329 0.255935970175281 0.242760697045329 0.250647764258191 0.253509576189663 0.243933404303005 0.247187241870057 0.259760555584766 0.259283256348142 0.256178537811063 0.245189261073400 0.245650505965898 0.244067710085520 0.257791210947228 0.246017491330494 0.251066121395007 0.242760697045329 0.252203412992435 5 5 + 6091747 6092215 6092028.091 6090956 6092547 + gene protein_coding_gene TRUE TRUE AT5G18390.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G65820.1); similar to Os03g0597200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050605.1); similar to OJ991113_30.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE02059.2); similar to Os08g0525500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062291.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.339465297205103 2.88278245867059 0.0154499338456093 1 3.09034408801896 11.2452700416709 0.339465297205103 0.141521205269577 AT5G52640_at 4.7575014312902 5.07989235931344 6.01612020978542 6.31392035127498 5.82314905743815 5.60315808641019 4.03483298443001 4.60931488876816 4.33501829568162 4.73175772949692 4.23137328775839 3.57799699913903 4.26310398730389 4.27448810593403 3.76585592090452 4.75887031268443 4.71165367495685 4.59761923732622 4.25169714591023 0.212450152728246 0.212511288595088 0.236349795511284 0.23519008250837 0.215388531384262 0.219480801292729 0.216218729436896 0.212450152728246 0.216766539025957 0.214662563555226 0.220187951487361 0.217426655149678 0.212450152728246 0.217056349800127 0.214776871450605 0.215641278916092 0.221549962485954 0.212450152728246 0.213040307416327 5 5 + 21371884 21372322 21372123 21369625 21372587 + gene protein_coding_gene TRUE TRUE AT5G52640.1 HSP81-1 (HEAT SHOCK PROTEIN 81-1); ATP binding / unfolded protein binding Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. Identical to Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) (HSP81-1) [Arabidopsis Thaliana] (GB:P27323;GB:Q03930;GB:Q96268;GB:Q9LTF3); similar to heat shock protein 81-4 (HSP81-4) [Arabidopsis thaliana] (TAIR:AT5G56000.1); similar to HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56030.1); similar to HSP81-3 (Heat shock protein 81-3), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56010.1); similar to heat shock protein 83 (GB:AAA32822.1); similar to heat shock protein HSP81-1 (GB:1908431A); similar to Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) (GB:P27323); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) -0.3251826188188 -2.87872247832777 0.0155606190241530 1 3.08402258505555 9.63579179497907 -0.3251826188188 0.130773267982421 AT5G40590_at 0.683430791535755 0.630892540906621 0.898842603864581 1.02375460189171 0.712429595221048 0.93790054017859 0.517946497907486 0.80771647562062 0.663805579985543 0.891186167434977 0.950333039807592 1.12785382500684 1.48543168963443 1.34634340700219 1.21012964747463 1.29275779948668 0.938695636499251 1.10268377742270 0.78556474998317 0.258633004874356 0.252135060159211 0.246551804197961 0.257377104296042 0.247687232128995 0.247585284921332 0.252839437990599 0.254969402430333 0.251100651903247 0.251581991122422 0.252347318758767 0.243608333787756 0.254350119808018 0.251130389358755 0.246355578134272 0.250358255355061 0.251682880828588 0.257738724667196 0.250330047402992 5 5 - 16268838 16269345 16269200.091 16268665 16269640 - gene protein_coding_gene TRUE TRUE AT5G40590.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G44370.1); similar to CHP-rich zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC21314.1); contains InterPro domain C1-like; (InterPro:IPR011424) 0.257677372463491 2.87569711947871 0.0156436156764444 1 3.07931211566212 1.75759625685398 0.257677372463491 0.0677276487845172 AT5G20160_at 9.34092056436847 9.4861330351592 9.66786518203379 9.78679852092172 9.56076270030415 9.46698719292617 9.18997607480475 9.25525285110812 8.06617109503636 7.55627334866108 8.39773573409155 8.79877933970803 8.79611196985718 8.42004554824237 8.80510432904207 8.68946829376642 8.8342769191165 8.33266454518579 7.84641325912281 0.162527500120736 0.150382873280412 0.15398372482688 0.156939755545954 0.155137761539621 0.162730063712418 0.149846999524371 0.151831882161436 0.157244355487332 0.168241194975367 0.153847083504852 0.151651275222152 0.151414943366022 0.158310151507392 0.151125476862572 0.146714004911915 0.152933501075857 0.156772466280317 0.151032130913138 5 5 - 6804240 6804949 6804563.909 6803784 6805203 - gene protein_coding_gene TRUE TRUE AT5G20160.1|AT5G20160.2 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to Os03g0241200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049514.1); similar to ribosomal protein L7 [Hyacinthus orientalis] (GB:AAT08750.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7AE; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038)|similar to ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis thaliana] (TAIR:AT4G22380.1); similar to Os03g0241200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049514.1); similar to ribosomal protein L7 [Hyacinthus orientalis] (GB:AAT08750.1); contains InterPro domain High mobility group-like nuclear protein; (InterPro:IPR002415); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45; (InterPro:IPR004038) -0.237732042505451 -2.87412928718324 0.0156868018814554 1 3.07687104379666 17.6979499664448 -0.237732042505451 0.0380274399600854 AT5G17290_at 7.58494414057709 7.72156109491128 8.7509011860083 8.63996705019566 8.96882011060637 8.57492857571553 7.48921536425667 7.70130639022191 6.98255567206473 7.48827913000127 7.72445870570373 7.36783485967413 7.49145110649494 7.7685165194558 7.16546881404739 8.070369343005 7.8541441257559 7.7087750013263 7.78615469831352 0.197922670191644 0.195106029473485 0.201562357959558 0.193708254916910 0.203051420430797 0.210721702690073 0.203185871140529 0.203857068805549 0.232436294147630 0.207198157864339 0.201445600437308 0.200822097280858 0.200231199875754 0.199811373436589 0.195146497933579 0.191837105832052 0.206397798514321 0.203341779825714 0.196828597398031 5 5|0 -|/ 5687176 5688350 5687594.9 5686947 5689902 - gene protein_coding_gene TRUE TRUE AT5G17290.1 APG5/ATG5 (AUTOPHAGY 5); transporter Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. Identical to Autophagy protein 5 (ATG5) [Arabidopsis Thaliana] (GB:Q9FFI2); similar to Autophagy protein Apg5 [Medicago truncatula] (GB:ABE83278.1); contains InterPro domain Autophagy protein Apg5; (InterPro:IPR007239) -0.271109278376877 -2.87190539075115 0.0157482650087886 1 3.0734085419124 15.7103923938413 -0.271109278376877 0.0831929980561256 AT5G01780_at 6.65516986460303 6.31325528370122 7.24938543858084 6.60680719076958 7.7118411544811 7.21502124819251 7.5142594844618 6.3259108422148 7.06797711294896 7.46629017293401 7.98856289713792 8.32359822655572 7.81386757788173 7.81114207870474 7.56655247061259 7.96654621677357 7.42607377511925 7.96813439241513 7.50134618388242 0.169304887641428 0.165221474273586 0.159706320708396 0.170168428157857 0.163866846459767 0.160323452745439 0.160661549541269 0.161887065492987 0.176512587210122 0.160408093988598 0.156514834686524 0.159865069625964 0.160590290038389 0.161772525854407 0.162248496651780 0.160090135042971 0.168767502874707 0.160206342761255 0.160865745953926 5 5|0 -|/ 302375 302942 302602.1 302362 304169 - gene protein_coding_gene TRUE TRUE AT5G01780.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G14160.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE94528.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.506194628274638 -2.87148517946321 0.0157599057803931 1 3.07275429870401 14.5505884105365 -0.506194628274638 0.25602821372694 AT5G03720_at 2.81281292944013 2.70075285207585 2.69364398382827 2.92885037283338 2.7879158153348 3.21585953668997 2.26895148534103 2.88553588645266 3.48531985064174 3.24321878556952 3.24701709643944 3.20145908394742 3.20195172303351 2.96514779142266 3.83851857908725 3.29723179946088 3.60928168577654 3.18677642918611 3.23675974691993 0.179269996675207 0.185006180260881 0.189289481397336 0.178349538671119 0.182946421267909 0.187814485008698 0.179689810324727 0.177627471288476 0.179623879467077 0.176688646015213 0.176518732002146 0.178252935307776 0.182982008506282 0.180637660843253 0.187988867766838 0.175862085218932 0.186374272118717 0.181464549931690 0.179486080144968 5 5 - 971950 972480 972165.545 971785 973682 - gene protein_coding_gene TRUE TRUE AT5G03720.1 AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-3 (AtHsfA3) (HSFA3) [Arabidopsis Thaliana] (GB:Q8GYY1;GB:Q9LZR6); similar to ATHSFA1D (Arabidopsis thaliana heat shock transcription factor A1D), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32330.1); similar to heat stress transcription factor A3 [Lycopersicon peruvianum] (GB:AAF74563.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.332855875903521 -2.87104075877263 0.0157722266104081 1 3.07206236504393 6.10688493337682 -0.332855875903521 0.137487727436737 AT5G48060_at 1.82040451322118 1.70458651918124 2.14866581716805 2.15973833851055 1.99226135010202 1.93437362994794 2.13659160534707 1.84776268445975 1.98530014979343 2.05824417808010 2.89631265291282 2.67026541479720 2.58116440797467 2.43000899188791 2.68339658101543 2.95595767366866 2.17764725709429 2.72540990341856 1.78166068993701 0.237893839684279 0.232928505784349 0.237239380707747 0.240599218407244 0.230692387221602 0.23249654136115 0.235196244713847 0.23487545789180 0.245444667817309 0.230250518646937 0.229881007631717 0.236168385877372 0.232729665483269 0.235282477695096 0.254239408466758 0.233517405490365 0.230584106236879 0.237322329573057 0.241255226394423 5 5 + 19495505 19496073 19495768.091 19492522 19496228 + gene protein_coding_gene TRUE TRUE AT5G48060.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12970.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to C2 [Medicago truncatula] (GB:ABD33426.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to C2 [Medicago truncatula] (GB:ABE85066.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.247485172890027 2.87101512588593 0.0157729375349318 1 3.07202245639883 4.25892574038374 0.247485172890027 0.0548093222856833 AT5G03680_at 2.76926072548051 2.59283674094406 2.47526542112018 2.2332506067986 2.39357651261259 1.62508084527401 2.83749648950612 2.59675358541065 1.95681592210609 2.04839863065666 2.41367955607726 2.49317108573265 2.17662295027774 1.99588390114066 2.12222817125975 2.53067967090549 2.25638829828072 3.19597224284342 2.28189956242695 0.200867459153550 0.199293461367243 0.201319491138802 0.199953730590780 0.204085929832533 0.203482803482026 0.203356204863030 0.20254649662506 0.199630258068423 0.211455596615868 0.203590632293103 0.197344207045302 0.196573820732982 0.200140255804535 0.202167367806670 0.200080366460834 0.207556076061274 0.196573820732982 0.198252932039148 5 5 + 960232 960676 960505.455 957743 961031 + gene protein_coding_gene TRUE TRUE AT5G03680.1 PTL (PETAL LOSS); transcription factor Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs. similar to EDA31 (embryo sac development arrest 31), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10000.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17016.1); similar to Os03g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048736.1); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.347413084016102 -2.87000542859873 0.0158009669687685 1 3.07045043284706 4.68733158570731 -0.347413084016102 0.148690046448220 AT5G41990_at 8.2091823198043 8.30352003909123 9.42463255730096 9.20672416160723 9.6283269017119 9.25185728476017 8.10037573210817 7.86688709763522 7.77582489248435 8.0188637842814 9.15274154634951 8.90889854047101 8.79615151077012 9.08603209797924 8.69649680887184 9.29085979485808 8.63385412868805 8.75133498639129 8.10100641001586 0.141744472273302 0.138717827261415 0.137641353286575 0.137659092933497 0.139490093736150 0.149265580725778 0.140707730899774 0.145839354796158 0.161543235254551 0.144432175180433 0.137884558182745 0.139048712167795 0.135352259920034 0.136473011909541 0.144929077742293 0.135279378629508 0.157268032443192 0.142942480711841 0.145911717487378 5 0|5 /|- 16812387 16812852 16812569.4 16812195 16815234 - gene protein_coding_gene TRUE TRUE AT5G41990.1 WNK8 (Arabidopsis WNK kinase 8); kinase Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G64630.1); similar to ZIK1 protein [Medicago sativa] (GB:CAC84087.1); similar to Os02g0672800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047709.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.274386827857006 2.86767685252185 0.0158657996747407 1 3.06682505739245 17.1888271979480 0.274386827857006 0.0869812730498023 AT5G27340_at 2.82995847795494 2.98503471397342 3.23734640329050 2.99109804904922 2.62548354278325 3.22808310853707 2.71283335845723 2.65755390689012 2.80724655708801 3.20826752225395 3.01170774249469 3.08433139484568 3.01005479002905 2.83087063123559 3.02496540773771 2.70421069350349 3.25669154505361 2.92187869833038 2.94118445591034 0.218178468389429 0.218761832359098 0.220567268960577 0.218239398320532 0.226507409202453 0.232198278585383 0.235847870616106 0.221131475181764 0.227513501973844 0.222554339282855 0.221911221865512 0.219925250997154 0.230728749663516 0.221347559787603 0.221392124914747 0.219692086338121 0.225694059519159 0.220729114427224 0.221398348696435 5 5|0 +|/ 9636376 9636838 9636611.6 9635888 9636887 + gene protein_coding_gene TRUE TRUE AT5G27340.1 unknown protein -0.306023648557756 -2.86623254736456 0.0159061465038181 1 3.06457644116863 5.89150146577757 -0.306023648557756 0.116200626517773 AT5G60930_at 1.58273927401972 1.24890842203702 1.94302697050003 1.68090064948155 1.67097539932285 1.47863189303646 1.43321639761590 1.51644381767379 1.83180726179936 2.20077855918325 2.21580533883108 2.90569937182594 2.22020988086727 2.70944172325291 3.30270210652 2.42236854166554 1.95495409430942 2.54107118293189 1.77412035816841 0.214305525988359 0.216068162144004 0.230810403680681 0.215690440874086 0.219230668500425 0.216042407005228 0.220086887829139 0.214699870616495 0.215805714591584 0.215554328174826 0.225661976933125 0.229105493287474 0.216362124048613 0.224739414211377 0.21858437044804 0.219292171841174 0.228811903748641 0.215079676025491 0.219209510403365 5 5|0 -|/ 24532654 24533469 24533118.3 24532624 24539737 - gene protein_coding_gene TRUE TRUE AT5G60930.1 chromosome-associated kinesin, putative similar to KICP-02, microtubule motor [Arabidopsis thaliana] (TAIR:AT3G50240.1); similar to FRA1 (FRAGILE FIBER 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT5G47820.2); similar to Os09g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062580.1); similar to kinesin family member 4A [Xenopus tropicalis] (GB:NP_001006741.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.269285042608836 2.86540117051211 0.0159294178213687 1 3.06328209492641 3.80415548116551 0.269285042608836 0.0819183226399573 AT5G47740_at 1.98031608605758 1.54633905626025 1.62270673799050 1.85614551494410 1.79839814791220 1.68636489367167 1.73399685287133 1.86131510403265 2.01138489288069 2.33459108531782 2.11809624030487 1.74468446731214 1.77846330383857 2.05703991045993 1.87930213934549 1.85328335759258 2.44355466553528 2.15397866751894 2.25994657861077 0.241433467119101 0.248454344661255 0.253008393227046 0.244350710042250 0.261067748705957 0.24774435746996 0.249641150172440 0.246271351586945 0.253711598904194 0.244801042877605 0.250028801474788 0.257772522274284 0.262956800735733 0.243145749348639 0.251902167471894 0.245198928879575 0.245468543012531 0.264756444278950 0.252745304017679 5 5 + 19355977 19356860 19356573.364 19355737 19357001 + gene protein_coding_gene TRUE TRUE AT5G47740.1 similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45910.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD54642.1); contains domain no description (G3D.3.40.50.1420); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) -0.277239198977366 -2.86410358207068 0.0159658073507354 1 3.06126193461425 3.86346006401332 -0.277239198977366 0.090186406918845 AT5G25110_at 2.44191726188389 2.42561554699711 2.64656010261638 2.81916011757337 3.82700289073738 3.37468872150126 2.31204072604932 1.97112943870942 2.51777628228864 2.33116547055086 2.60975168536146 2.14704623343329 2.95064608377793 2.94601322898642 2.67759593741206 2.49003872572601 2.72827128192367 2.45007106857498 2.09444452353687 0.207341835511258 0.202649395942416 0.208286320850882 0.203534733499011 0.204562259275491 0.21223384133237 0.209296121723487 0.199738344688202 0.216537176823953 0.20536988690168 0.200729043129453 0.199738344688202 0.199738344688202 0.204069698010871 0.203640621255361 0.199738344688202 0.202180510712870 0.209923108177703 0.199738344688202 5 5 - 8657817 8658318 8658048.364 8657629 8659325 - gene protein_coding_gene TRUE TRUE AT5G25110.1 CIPK25 (CBL-INTERACTING PROTEIN KINASE 25); kinase member of AtCIPKs similar to CIPK5 (CBL-INTERACTING PROTEIN KINASE 5), kinase [Arabidopsis thaliana] (TAIR:AT5G10930.1); similar to CBL-interacting protein kinase 6 [Populus trichocarpa] (GB:ABJ91234.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.290181310212800 2.86378578878948 0.0159747322536888 1 3.06076717897931 5.19696003714598 0.290181310212800 0.102506972995635 AT5G62420_at 1.16450122921490 1.53744321886581 1.28401940235432 1.67213147639531 1.59456245432811 1.16462504787989 1.41337420243728 1.42299398416714 1.51523980637522 1.91583871613536 1.01007298620373 1.1643492372713 1.58906590625701 1.53682847654336 1.50363276470992 1.47521166738576 1.17857473185818 1.43796777912802 2.01596047422459 0.221764958959761 0.214475967585720 0.221562093991863 0.219252380949277 0.220979076808473 0.221359626337349 0.221027625489087 0.220665250460877 0.214909771497311 0.217118525631297 0.221919523348077 0.22152215640506 0.224389640704745 0.226033305013313 0.228576666267824 0.217296025856517 0.224401346454145 0.231106487916120 0.217152385943173 5 5 + 25082588 25083285 25082923.364 25082061 25083337 + gene protein_coding_gene TRUE TRUE AT5G62420.1 aldo/keto reductase family protein similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G37770.2); similar to aldo/keto reductase [Fragaria x ananassa] (GB:AAV28174.1); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) -0.309334258597107 -2.86361269552726 0.0159795955101605 1 3.06049769972784 2.99552768157937 -0.309334258597107 0.119226427704273 AT5G55390_at 7.9748028303369 7.88471335743626 8.48630777892475 8.59981486532322 9.06743833841603 8.83675117489446 7.8712604461048 8.10779251484285 7.91873579254114 7.98625513361374 8.4846771974727 8.51626317364797 8.75810962933372 8.16950882770045 8.2592011714738 8.87451696960106 8.20729987552985 8.62589412461043 8.22670877020143 0.145241244912121 0.141915105386532 0.146033066848250 0.143318285415528 0.144222786407010 0.141887599556345 0.142225190604954 0.141156827087165 0.160540657415277 0.139206981632901 0.145894382891578 0.142646035143206 0.138559604548985 0.149829274376826 0.156265525936942 0.143946537584525 0.167162169202546 0.144095812885259 0.142133429431098 5 5 - 22465405 22465952 22465668.455 22465192 22471640 - gene protein_coding_gene TRUE TRUE AT5G55390.1 EDM2; transcription factor Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. similar to ELP1 (EDM2-LIKE PROTEIN1), zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G48090.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01751.1); similar to Os08g0502000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062167.1); similar to Os08g0337300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061580.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) -0.252370989158429 -2.86329711030199 0.015988466070435 1 3.06000638366498 16.6190270482633 -0.252370989158429 0.0624350814006695 AT5G24690_at 7.60634322055432 7.55245080758178 8.21162575442875 8.16864491702513 8.91462913324518 8.89218241090142 7.55267625458772 7.63905481087665 7.09398643573692 6.42537552694214 7.96622616679128 8.00273234295941 8.18624757101753 8.09600533306381 8.26573445065834 8.15555434335241 8.05133352706962 8.09475098719337 6.56664025641521 0.156577974038728 0.157765132413528 0.160737127742924 0.159066123569678 0.163455758265055 0.165337277899802 0.161666601537942 0.163387150701504 0.16541413635634 0.184964643886558 0.155049968178434 0.160282886015015 0.157483033115747 0.163193852068647 0.156396180958542 0.160427300286568 0.162111798128386 0.156270375535904 0.176271053545311 5 5|0 -|/ 8455882 8458484 8457279.65 8455460 8458741 - gene protein_coding_gene TRUE TRUE AT5G24690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22790.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84237.1) 0.229650863552569 2.86193450900294 0.0160268232562546 1 3.05788504464018 15.4660294952974 0.229650863552569 0.0195152071606095 AT5G66350_at 2.04425336458358 1.9341837492683 1.86185514784741 1.94221453450268 1.5709443425806 1.81517123888298 2.06470968705489 1.71695041491963 2.24526217078178 2.14520222433167 1.80649442582167 2.0975309085712 1.97328278563317 1.98542995262465 2.39433884844637 1.87277669636450 2.22062271561084 2.39910105311587 2.0442605678153 0.194791411009595 0.192408394753589 0.199119659286959 0.202989654516327 0.199485015995665 0.196442345299027 0.194338420806712 0.195185969274247 0.192408394753589 0.194660999156114 0.192408394753589 0.198340874162427 0.194044376282667 0.192865170822209 0.195807869915346 0.197000342997 0.195385330292606 0.192408394753589 0.200397800541826 5 5 - 26521961 26522842 26522236.909 26521693 26523795 - gene protein_coding_gene TRUE TRUE AT5G66350.1 SHI (SHORT INTERNODES); transcription factor A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. similar to STY1 (STYLISH 1) [Arabidopsis thaliana] (TAIR:AT3G51060.1); similar to hypothetical protein [Thellun (GB:ABB45842.1); contains InterPro domain Zinc finger, LRP1-type; (InterPro:IPR006510); contains InterPro domain LRP1, C-terminal; (InterPro:IPR006511); contains InterPro domain Protein of unknown function DUF702; (InterPro:IPR007818) -0.264592496306092 -2.86154525068537 0.0160377978239104 1 3.05727903993583 3.9880880570799 -0.264592496306092 0.0772289742478705 AT5G30490_at 3.75933687150107 3.65556394142708 5.06261501871392 5.25696247360774 5.40558200371277 5.03012036127314 4.34416713266415 3.63395166888381 3.1193182974412 3.49755962015612 4.76538560671058 4.13911615013804 4.12883393803802 4.5369122011657 4.24822330642092 4.59085643608848 4.4122469652781 4.18730684567276 3.7492483889745 0.229434524698136 0.234229862776395 0.226169654694442 0.225198088526656 0.225913220846336 0.240446490617243 0.221546816224030 0.2322078573903 0.226000547032382 0.248842922194035 0.221546816224030 0.231162315759271 0.225237209133504 0.235428732940523 0.222866197074548 0.223000360538283 0.235849354890261 0.236000829341529 0.227589430574101 5 5 + 11629550 11631451 11630323.273 11629213 11631760 + gene protein_coding_gene TRUE TRUE AT5G30490.1|AT5G30490.2 similar to BCNT [Hyacinthus orientalis] (GB:AAT08752.1); similar to Os01g0328500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042916.1); contains InterPro domain Bucentaur or craniofacial development; (InterPro:IPR011421) 0.339994637283595 2.85808520580916 0.0161356809108532 1 3.05189246623416 8.43428024232947 0.339994637283595 0.144157464615019 AT5G46690_at 2.10653194854168 2.4755081582981 0.9246391379884 0.755076822577036 1.11322453901069 1.55103006432603 1.95625532508610 1.85677789802970 2.51694875546010 2.14775633445900 4.76724617526278 5.26015681554176 3.40216373351061 4.09158944182763 4.30870543680705 3.01679572407595 1.60512756756803 2.84953000552736 3.52371963986880 0.281776673025358 0.281776673025358 0.287595233977956 0.286867038062852 0.285615693131667 0.298561983997008 0.281776673025358 0.282355456433832 0.291218880049305 0.284454104095613 0.290698048196217 0.295430419066082 0.287288404003650 0.287554788287737 0.293207630339711 0.281776673025358 0.281776673025358 0.281776673025358 0.281776673025358 5 5 + 18963645 18964609 18964018.091 18962842 18964864 + gene protein_coding_gene TRUE TRUE AT5G46690.1 BHLH071 (BETA HLH PROTEIN 71); DNA binding / transcription factor similar to basic helix-loop-helix (bHLH) family protein (bHLH096) [Arabidopsis thaliana] (TAIR:AT1G72210.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE79190.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.292035562983846 -2.85761350112617 0.0161490715930161 1 3.05115813245247 4.78845012295444 -0.292035562983846 0.104760875711259 AT5G23860_at 4.97327600145811 5.27651329998071 4.59322917288261 4.00229028123502 4.64997143508351 5.03986584312005 4.52703871555067 5.91666598638226 6.01517462252146 5.23697046213149 7.79857628546872 8.06942624867944 8.02898457341257 7.40712519657168 7.73988480088044 7.11606515006117 5.90624833974842 6.78874508547127 6.18040060200482 0.22272387921545 0.225955224206962 0.228104246920636 0.228469024897209 0.224320039531772 0.225822316877253 0.230934083248024 0.223275668403779 0.221953251239518 0.22483972897973 0.221437805505229 0.219948928692842 0.221869913216110 0.228626876030534 0.219948928692842 0.221599196347787 0.235162216240648 0.231796259857632 0.221207584051741 5 5 + 8043941 8044447 8044146.273 8042879 8044822 + gene protein_coding_gene TRUE TRUE AT5G23860.1 TUB8 (tubulin beta-8) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. Identical to Tubulin beta-8 chain (Beta-8 tubulin) (TUBB8) [Arabidopsis Thaliana] (GB:P29516;GB:Q9FF94); similar to TUB3 (Tubulin beta-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to TUB7 (tubulin beta-7 chain) [Arabidopsis thaliana] (TAIR:AT2G29550.1); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to beta-8 tubulin (GB:AAA32886.1); similar to Tubulin beta-1 chain (Beta-1 tubulin) (GB:P37392); similar to Tubulin beta-2 chain (Beta-2 tubulin) (GB:Q40106); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) -0.533624473638257 -2.85751803465475 0.0161517830379368 1 3.05100951388316 11.4562216030896 -0.533624473638257 0.274946951287411 AT5G24316_at 1.77842590738861 2.07607499439751 2.14425274452518 2.03970108509600 1.57691817544432 1.96055370071163 1.88756369205444 2.04058344836595 2.37395039005456 2.08597681919827 1.87578403588183 1.74789515813670 1.78974040508167 2.15865588333125 1.75742752620411 2.12786542494353 2.31619432125197 1.97805545645188 2.04289828882309 0.177012151533849 0.175749944047116 0.171340846774685 0.184540459422465 0.176389701821714 0.178977703985962 0.169732073183285 0.176988930982630 0.170009332412080 0.179430326627533 0.172806522861209 0.169732073183285 0.169732073183285 0.180004337531425 0.173745623487657 0.179563396142771 0.179222614438363 0.174328104763476 0.184193225656088 5 5|0 -|/ 8279324 8279882 8279492.333 8279182 8279967 - gene protein_coding_gene TRUE TRUE AT5G24316.1 proline-rich family protein -0.276199264606952 -2.85590427665217 0.0161976863104303 1 3.04849729649741 4.00628960638246 -0.276199264606952 0.0899413703908181 AT5G02780_at 2.59546284221986 2.82525780119230 4.40467425895055 4.34251613195881 3.06413988048733 2.58182564727006 1.48236541762666 2.21854755081686 1.60828726959711 2.05016872533443 2.00291704730174 1.66285280231157 2.07482772994052 2.14797618839417 1.73381561993304 1.70155667304987 2.10053455960459 2.01626953401801 2.34409987033208 0.241426439692720 0.231683388767320 0.251539298932378 0.246534909176277 0.237457721215995 0.231687939154630 0.252743433488229 0.233491976221614 0.234518037683002 0.245430820275418 0.235347892459806 0.233088915760747 0.231345849060100 0.229836651963187 0.229836651963187 0.232825042568993 0.234481736813005 0.235676702039109 0.231487858995857 5 5|0 +|/ 631341 632274 631805.667 630874 632681 + gene protein_coding_gene TRUE TRUE AT5G02780.1 In2-1 protein, putative similar to In2-1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G02790.1); similar to glutathione S-transferase [Pisum sativum] (GB:BAC81649.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.356822724094591 2.84719725953755 0.0164476254542417 1 3.03494332589371 4.90482155351883 0.356822724094591 0.157779974785203 AT5G28720_at 2.81370099120338 3.29936608677077 3.2113581876396 3.54107481016213 2.02759572224740 3.06459667370998 2.08289684963804 3.22934301590495 3.20675784421826 3.57372297339325 2.94832027099164 3.01566924953335 2.60054989475271 3.08317214691175 3.55437106029083 3.10321488481274 2.75627655522978 3.51143261983213 3.31893485151667 0.244614805177614 0.254374280234714 0.265428872991754 0.257010065030251 0.247472744259584 0.251069466007369 0.253054975786762 0.245274077708065 0.25367336944646 0.244614805177614 0.245022699625983 0.244614805177614 0.252964392029084 0.244614805177614 0.248938353224296 0.245263337171236 0.245516614208624 0.264941992684338 0.254561743513815 5 5 + 10776765 10776930 10776845.875 10776135 10776956 + gene protein_coding_gene TRUE TRUE AT5G28720.1 unknown protein -0.549295385389059 -2.84599721480482 0.0164823754223243 1 3.03307534447003 6.12779040466141 -0.549295385389059 0.286157983525469 AT5G25540_at 8.94548989868712 9.02373966907231 9.95212506863694 9.7258148056477 9.86664500586608 9.61635192685836 8.34913663482446 8.57930672408547 8.55478140064206 8.28512785399233 9.67423911466493 9.49689327627287 9.44583810357864 9.49640535603993 9.18875319252416 9.34493258306499 9.28737008948196 9.57531608583321 8.5592357531949 0.121788577558925 0.121788577558925 0.130598372582430 0.12556548702673 0.124414397535154 0.130496454435215 0.126952628595234 0.121788577558925 0.132943149196911 0.131739236707940 0.124595975689772 0.125447669404931 0.12656727505876 0.126972964237859 0.13041976979402 0.124398973662091 0.129528773994212 0.130374102348050 0.128509352753839 5 5 - 8891780 8892322 8892056.455 8891528 8892993 - gene protein_coding_gene TRUE TRUE AT5G25540.1 CID6 (CTC-Interacting Domain 6); protein binding Expressed protein contains PAM2 PABC interacting domain. similar to CID5/IPD1 (INCREASED POLYPLOIDY LEVEL IN DARKNESS 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G11440.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin system component Cue; (InterPro:IPR003892) 0.258203377376741 2.84217032894652 0.0165936841165081 1 3.02711860358604 18.2098762889393 0.258203377376741 0.0719716552374517 AT5G05150_at 1.71087739515729 2.06034930677174 2.13122867640432 2.61690420387114 1.93419379409282 2.01047377420566 2.79741617006733 2.38504038307378 2.20982892279832 2.49024542534100 2.70059269174572 2.15405688043512 2.60924581936991 2.17993061828511 2.25047474494791 2.28495837895569 2.24692273206247 2.86246156220417 2.80639051865718 0.221743186677117 0.216886275334369 0.216886275334369 0.219382309937859 0.217572376738818 0.22751926133533 0.218531833381565 0.216886275334369 0.224565949048644 0.228988406443160 0.222442083377173 0.216886275334369 0.219695249408050 0.226105169161566 0.217043992503241 0.216886275334369 0.220083518152649 0.216886275334369 0.219181699502966 5 5 - 1525069 1525557 1525305.182 1524842 1526200 - gene protein_coding_gene TRUE TRUE AT5G05150.1 AtATG18e (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) e) similar to AtATG18d (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) d) [Arabidopsis thaliana] (TAIR:AT3G56440.1); similar to Os01g0168500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042130.1); similar to WD40-like [Medicago truncatula] (GB:ABE86644.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.315124683237574 -2.83684469310357 0.0167498411885940 1 3.01882941647938 4.66242815500531 -0.315124683237574 0.126446456477553 AT5G22950_at 8.46680861256167 8.55625915873918 9.58610330112777 9.74119204474738 9.80964348908914 9.56817172834815 8.84195148788142 8.5601760854403 8.13252757026926 7.82779415591386 9.09542774544948 8.89489694908461 8.85647640398459 8.95766170879144 8.89336207114113 9.07981152321488 9.26254966159266 8.88173113086693 7.8733207801806 0.141950951154971 0.130681523613253 0.137850171663569 0.137181381470016 0.139188107560949 0.136517056449371 0.134758946783949 0.134260600110315 0.142674990409641 0.145653837339705 0.133229094315901 0.133040345953357 0.136964570456295 0.137216982606657 0.131408596305776 0.130681523613253 0.135089148628709 0.135872362969487 0.140068760553388 5 0|5 /|+ 7682098 7682695 7682385.875 7681308 7682906 + gene protein_coding_gene TRUE TRUE AT5G22950.1 SNF7 family protein similar to SNF7 family protein [Arabidopsis thaliana] (TAIR:AT3G45000.1); similar to putative endosomal Vps protein complex subunit [Oryza sativa (japonica cultivar-group)] (GB:BAC45115.1); contains InterPro domain Snf7; (InterPro:IPR005024) 0.257090920222254 2.83616521574747 0.0167698703832355 1 3.01777186890213 17.6086818141853 0.257090920222254 0.071301862220551 AT5G51670_at 2.69679375090501 2.18705101223175 2.6969884472561 2.79055041956511 2.44035828062797 2.83906236915233 2.26001368324438 2.83254765749322 3.15075406699164 2.7850375744511 5.32507843260271 4.63930872521782 4.60414838132953 5.13030169125489 4.38643346257737 4.9057835554659 3.80829165187963 4.07173017027185 3.38717475239628 0.268569681190422 0.248867416959114 0.246674672604248 0.246709036238133 0.246143599904829 0.243432581970839 0.254769482888992 0.249404558664911 0.256296455383086 0.241775353260252 0.240278109810696 0.249249578717826 0.240208395979903 0.245016863610082 0.239238950275759 0.247341118588353 0.245573520062882 0.252461174803846 0.247988149512755 5 5 + 21011730 21012298 21012015.091 21010786 21012322 + gene protein_coding_gene TRUE TRUE AT5G51670.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23160.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP21394.1); similar to Os03g0858600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051962.1); contains InterPro domain Protein of unknown function DUF668; (InterPro:IPR007700) 0.345265754954318 2.83359525274757 0.0168458435164441 1 3.01377202465479 6.45119068927847 0.345265754954318 0.150403480330898 AT5G16160_at 1.67021816099521 1.62532021780351 2.25711280755336 2.30221411054745 2.20587026217054 1.81012451493099 1.57006750995561 2.00810432366234 1.88473288621816 1.38208806385355 1.87174410379591 1.87753803669565 1.97994025570789 1.98515347483358 2.05112787641621 2.38749949615578 2.27442049488572 2.06006789845701 1.56162104568663 0.193196084943455 0.19442692476265 0.194193025734477 0.193388109561273 0.190899261064701 0.19933505240728 0.193410564895401 0.192907781440758 0.203821179338150 0.196700539064812 0.190412766470745 0.191272392262751 0.192975652973577 0.193181709003177 0.190203817850082 0.194762689027552 0.194620721033735 0.194752000223822 0.199343234864875 5 5|0 -|/ 5275955 5276553 5276312.8 5275698 5276609 - gene protein_coding_gene TRUE TRUE AT5G16160.1 similar to hypothetical protein [Cleome spinosa] (GB:ABD96920.1) 0.287105612440949 2.83081763388732 0.0169283434228104 1 3.00944913484407 3.766337548388 0.287105612440949 0.102751474337229 AT5G01610_at 6.02287965089627 6.45382831898665 7.2640285305884 7.19484737110515 6.75689220908532 6.01737809197669 4.45881908062597 4.48101302954628 3.29464262677069 3.76845922472825 5.07242457284106 4.84422658006008 3.97920916057051 4.94487691135364 4.25766937781643 4.92609528440948 4.60448595947601 4.26464140403435 3.45873456930276 0.229523296674906 0.222025687358488 0.227881413003336 0.221102649324841 0.224521264340997 0.235877217430076 0.221767595093185 0.222335394019178 0.235449315160490 0.229954286093558 0.221670544748326 0.220822284139865 0.226003441028105 0.226121571915400 0.223890274784708 0.226301314769122 0.235113154206523 0.228410027627216 0.220804459861434 5 5|0 +|/ 231092 231965 231563.5 230984 232202 + gene protein_coding_gene TRUE TRUE AT5G01610.1 Identical to Protein At5g01610 [Arabidopsis Thaliana] (GB:Q9M015;GB:Q84VV4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.2); similar to Protein of unknown function, DUF538 [Medicago truncatula] (GB:ABE91533.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.342608195517093 2.83070870357861 0.0169315870748427 1 3.00927960656910 10.1407020169784 0.342608195517093 0.14865350173053 AT5G42190_at 10.3964352502071 10.5148231867673 11.2027344835213 11.2326106319041 11.5010975822624 11.5328897048604 10.4296264908290 10.5439333166930 10.5967680072657 10.1069253576499 11.2122969138240 10.8853270702810 11.1739574994308 11.1746928739207 10.8685038909854 11.0026971580710 11.0094337930797 11.2311485940476 10.2362114628981 0.0688762815420644 0.0677721883100054 0.0687084898310437 0.0677721883100054 0.0713293627332673 0.0711566648602151 0.0699735355309388 0.0729455574920509 0.0762185969380841 0.068582721436402 0.0677721883100054 0.068489302297098 0.0703655896575721 0.0694703315341145 0.0711588288346985 0.0700317204380328 0.0711935822962534 0.06911617703601 0.0694144968920898 5 5|0 -|/ 16871734 16872659 16872319.2 16871419 16872866 - gene protein_coding_gene TRUE TRUE AT5G42190.1 ASK2 (ARABIDOPSIS SKP1-LIKE 2); ubiquitin-protein ligase Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis. Identical to SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2) (SKP1B) [Arabidopsis Thaliana] (GB:Q9FHW7;GB:O65283); similar to SKP1 (ARABIDOPSIS SKP1 HOMOLOGUE), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G75950.1); similar to SKP1-like protein [Silene latifolia] (GB:BAE72121.1); contains InterPro domain SKP1 component; (InterPro:IPR001232) 0.230336468286953 2.83028503954311 0.0169442085765979 1 3.00862026039199 21.6107982476187 0.230336468286953 0.0294625640171748 AT5G24810_at 8.94661046836206 8.98828141818172 9.78343364121869 9.5924741256955 9.17660931286171 8.6518688763496 8.59545291932206 8.48675529522565 8.8240498209132 8.6547079525364 9.08764961617476 9.16684226701176 9.00996806231232 9.10519418822925 8.57099492100361 9.7010467128201 9.04453824054053 9.03449242800889 8.43889373949293 0.143812638910703 0.141161846547492 0.144909088836165 0.136014112696097 0.138428731260064 0.138142174360670 0.141371791338994 0.145308485818739 0.143781476630503 0.139894519908052 0.137177926385087 0.134438829234036 0.134011447320934 0.143617949270107 0.142468634026030 0.136370928538946 0.138262177506510 0.137525963401692 0.143324926054484 5 5 - 8516911 8517470 8517120.545 8516638 8522770 - gene protein_coding_gene TRUE TRUE AT5G24810.1 ABC1 family protein similar to ATATH13 (ABC2 homolog 13) [Arabidopsis thaliana] (TAIR:AT5G64940.2); similar to Os06g0701300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058483.1); similar to hypothetical protein Swol_1468 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] (GB:YP_754144.1); contains InterPro domain Penicillin-binding protein, transpeptidase fold; (InterPro:IPR012338); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Beta-lactamase; (InterPro:IPR001466); contains InterPro domain ABC-1; (InterPro:IPR004147) -0.282684460577718 -2.82986151989486 0.0169568352029738 1 3.00796114259401 17.8923397448989 -0.282684460577718 0.098712434758468 AT5G37180_at 2.66069804932651 2.59135928302147 3.03862075115052 2.82595068300786 2.59996124999139 2.58078050217847 3.05174571642071 2.63462455999988 3.40113353896529 3.00296516177986 3.55006266574232 3.8698403424206 2.99621613911867 3.76131412316262 4.04636277852014 3.57549280963344 3.93260147546718 3.37914463922271 3.39469579158599 0.180152670936535 0.169252430033847 0.174574195782236 0.175783101011086 0.166705160064849 0.174361081809475 0.167181817702628 0.166705160064849 0.175318484262049 0.177382436164331 0.181791587366380 0.169512103330661 0.185200353692734 0.166920334354869 0.177346267593118 0.174679789008175 0.178426607890070 0.176765965153285 0.170975506969838 5 5|0 +|/ 14739332 14740105 14739587.333 14735468 14740143 + gene protein_coding_gene TRUE TRUE AT5G37180.1 SUS5; UDP-glycosyltransferase/ sucrose synthase Encodes a protein with sucrose synthase activity (SUS5). similar to SUS1 (SUCROSE SYNTHASE 1), UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] (TAIR:AT5G20830.2); similar to SUS6, UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] (TAIR:AT1G73370.1); similar to SUS3, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02280.1); similar to H0211A12.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66603.1); similar to sucrose synthase 1 [Pyrus pyrifolia] (GB:BAB20799.1); similar to sucrose synthase [Coffea arabica] (GB:CAJ32597.1); contains InterPro domain Sucrose synthase; (InterPro:IPR000368); contains InterPro domain Sucrose synthase, plants and cyanobacteria; (InterPro:IPR012820); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) -0.265988692696503 -2.82974819354962 0.0169602154634033 1 3.00778477498767 6.2005397006061 -0.265988692696503 0.0819764860864554 AT5G19620_at 5.46899710704187 5.44388726502866 5.97566968257472 6.01985360655041 6.01202095775142 6.09992023298539 5.64377227415752 5.14150989554458 5.69871114191335 5.97626820704989 6.48166474465792 7.02256760888975 6.74756570347624 6.25933265870219 6.81302357799972 6.88444935256603 6.9147210611991 6.29051568627278 5.63141046515182 0.205342386424315 0.207569703717758 0.210297453852277 0.207401081482330 0.209544665739593 0.216279550803117 0.214748565761621 0.214171562362727 0.210680577001535 0.213179462241201 0.20857414414828 0.208449378901142 0.207829961864293 0.211297371929893 0.216417362083776 0.205342386424315 0.213731249671760 0.211753467621108 0.208038982445450 5 0|5 /|+ 6626859 6627615 6627312.25 6623206 6627848 + gene protein_coding_gene TRUE TRUE AT5G19620.1 OEP80 (ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA) AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75 similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G44160.1); similar to Os02g0196300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046192.1); similar to Surface antigen variable number [Anabaena variabilis ATCC 29413] (GB:YP_320615.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184); contains InterPro domain Surface antigen variable number; (InterPro:IPR010827) -0.272323964106178 -2.82877340806698 0.0169893189443580 1 3.00626774608518 11.9484672046671 -0.272323964106178 0.088677050166817 AT5G23920_at 8.79614241481961 9.0482287528338 9.54028478439253 9.72536518775832 9.8567540758603 9.58932773535104 9.74767651697132 9.72410928750475 8.38810529319661 8.99263938300416 9.08613676398472 9.24724817823435 9.56984564781926 9.60063258398448 8.79575570001057 9.78708584683589 9.79644803708743 9.21535049699334 8.93363607959673 0.149429674785494 0.140975889524813 0.143941543782159 0.152531499321998 0.148103855159254 0.151441756412652 0.148256180265848 0.141441005645210 0.154558130713134 0.149467340276350 0.141180518740466 0.146574130486131 0.141439096636786 0.144353719283761 0.152355010217744 0.145879227824753 0.145747552232358 0.140731022305913 0.141700067334599 5 5|0 -|/ 8073399 8074000 8073661.3 8073227 8074173 - gene protein_coding_gene TRUE TRUE AT5G23920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52420.1); similar to unknown [Xerophyta humilis] (GB:AAT45003.1) -0.256435817480135 -2.82871490004242 0.0169910673686227 1 3.00617669245879 18.5828726738371 -0.256435817480135 0.0713259318237685 AT5G24580_at 2.79712041298779 3.25569744311754 2.87865867522683 2.88433864922982 2.51850243714505 2.97745308632755 2.9633843990937 2.86512102141503 3.41296775036281 3.83343823644496 4.78153281883089 5.34501065282555 3.83351172647396 4.18566617217866 5.42483979826376 4.27437262041405 3.80477843427963 4.53518633675958 4.03619271429551 0.274159175106744 0.277942937760015 0.274159175106744 0.282778173596096 0.283964168975149 0.282919010797789 0.277059533877777 0.274159175106744 0.276823885213881 0.277586062337326 0.294951492701396 0.310451555573566 0.278123313304214 0.282428599867626 0.285863732726813 0.280462654705272 0.277882244701174 0.276405248288283 0.289583525361663 5 5 - 8410405 8411399 8410918.727 8410261 8412268 - gene protein_coding_gene TRUE TRUE AT5G24580.1|AT5G24580.2 copper-binding family protein similar to ATFP3 (Arabidopsis thaliana farnesylated protein 3) [Arabidopsis thaliana] (TAIR:AT5G63530.2); similar to PPAK motif; Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE84491.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.298844760046807 -2.82757588759929 0.0170251409939010 1 3.00440410861506 7.03452379242009 -0.298844760046807 0.113560857641756 AT5G16250_at 1.94322124520652 2.58075374398574 2.17252634523311 2.50836273885779 2.22842205645640 2.72453158383740 2.37796108010004 2.70850385431266 2.67444238136204 2.93486277644145 3.87671112534364 4.74894435378883 4.45839990123016 4.41914870616132 5.19432335211732 4.16380265961881 4.49037537438916 4.40522595781665 2.98563115843863 0.235305607199887 0.225803276078268 0.237688784377259 0.2266624230707 0.223756742098836 0.224779080531975 0.232286870733719 0.227621485559577 0.224396869437394 0.2328794363829 0.223756742098836 0.228163442496504 0.223756742098836 0.231853977680114 0.245908587690539 0.223756742098836 0.233939594472575 0.230341361104165 0.22795901657117 5 5 - 5310275 5310764 5310540.273 5310098 5310954 - gene protein_coding_gene TRUE TRUE AT5G16250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02640.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78001.1) 0.359749308248683 2.82671771093898 0.0170508586296811 1 3.00306859246338 6.07283293144318 0.359749308248683 0.161842379505897 AT5G57280_at 3.87024572573619 4.67110566693246 5.22164726283049 5.47108866436874 4.90479946978532 4.58923836172408 4.43711030263049 4.94065171683851 3.41579458217562 3.35917798703607 3.22784688397583 3.68916977146967 3.81787591128682 3.44307203928277 4.16176647042902 4.04105879472992 3.77078663970608 4.00782518507166 3.79772092906492 0.203152395851816 0.19790564022983 0.202709608944342 0.200664397966638 0.200810644724151 0.213484645053506 0.209537271290156 0.209137479673522 0.205933417316311 0.201877543872234 0.201323579805350 0.208473412887636 0.203675504768276 0.197418685999894 0.203494251384095 0.205635427912391 0.203637741751749 0.202023650544825 0.202643747926375 5 5 + 23222477 23223666 23223070.091 23221687 23223885 + gene protein_coding_gene TRUE TRUE AT5G57280.1 similar to SAM (and some other nucleotide) binding motif [Medicago truncatula] (GB:ABE83993.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) -0.381808848474149 -2.82559290463803 0.0170846255253143 1 3.00131816431724 8.41031408539887 -0.381808848474149 0.177895685067572 AT5G02890_at 5.09261125074678 6.29318540379647 2.43109948633437 2.7586654556944 4.79260128528106 4.4783535750025 3.54235533901973 3.87309912983257 4.24552881027791 4.31767104542681 6.38951510951073 9.02069833142046 5.79061595933594 5.98932060638329 8.65581011468498 6.78319914201561 3.42129977390228 5.81007131511468 4.95753089608718 0.256281212274860 0.254772529102188 0.262406602647861 0.265245145970256 0.250512432117075 0.251693829974667 0.267051262377815 0.251888519554372 0.261426937779291 0.251840064277289 0.261164865634895 0.262261128534369 0.255244753617655 0.256114847741164 0.254459257342846 0.252402846826964 0.261741562012570 0.260106552454978 0.251607888831758 5 5 - 670229 670725 670524.545 670063 671469 - gene protein_coding_gene TRUE TRUE AT5G02890.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT4G29250.1); similar to transferase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24984.1); similar to Os02g0653400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047605.1); similar to putative protein [Oryza sativa] (GB:CAC39046.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.457141050338974 -2.82503943875222 0.0171012652662579 1 3.00045686844468 9.65248463803513 -0.457141050338974 0.229375508957478 AT5G14530_at 5.09494609411634 5.82910166363117 6.76494254793795 7.04724080226257 7.08373606915187 7.63275664418948 4.23558731902941 5.33754722059293 4.47489474080879 3.94608640091993 4.8767008760026 4.75413524705118 5.8358292731853 5.58017697121653 4.59977067599963 4.9411626576258 4.98226595002064 5.12771647298706 4.07756517618039 0.232728542263675 0.234141139396014 0.240952717840464 0.240062124913821 0.235176946654217 0.252777075817801 0.235842074340336 0.237817435268919 0.240374193091301 0.253004381746648 0.234666603614372 0.238922000617982 0.246335978962068 0.243312448912842 0.238883140885483 0.232728542263675 0.242980290572191 0.248864836775614 0.237865495702506 5 5|0 -|/ 4684785 4686003 4685352.625 4684623 4686912 - gene protein_coding_gene TRUE TRUE AT5G14530.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G66240.2); similar to hypothetical protein DDBDRAFT_0218126 [Dictyostelium discoideum AX4] (GB:XP_641992.1); similar to Os07g0589400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060150.1); similar to Os05g0543300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056203.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 0.492968191020938 2.82458554315635 0.0171149235843479 1 2.99975052742236 10.7549332308544 0.492968191020938 0.252826640482159 AT5G28680_at 2.4317745283146 2.22859107785374 2.69986691649410 2.84428202229277 1.94848935136383 2.30050582303153 2.16882543675937 2.06888654366961 3.06387713278993 2.21611300710960 2.44561963250735 2.42296843270639 2.33866462332029 2.28725090830419 2.47023725264806 2.60204375289147 2.65270383460698 2.22271409602393 2.66611325470135 0.190768355002828 0.186327666611708 0.185731948501385 0.186384802265791 0.178386699545155 0.192376775379599 0.190987736518661 0.179671734188919 0.194716177251055 0.186167029622381 0.181610810277754 0.178912651045239 0.188856077815884 0.180324235567147 0.182601746949547 0.179994482189738 0.183627975515280 0.182787083050728 0.189824288123090 5 5 - 10719509 10719972 10719691.455 10719441 10722017 - gene protein_coding_gene TRUE TRUE AT5G28680.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G04690.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G51550.1); similar to Os05g0280700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055089.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD81103.1); similar to receptor protein kinase-like protein [Capsicum annuum] (GB:AAL40864.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.260433285506863 -2.82238816700178 0.0171812002439723 1 2.99633108927212 4.8758909365523 -0.260433285506863 0.07662289427531 AT5G54220_at 3.04466393817287 3.02178181846696 3.31868542473465 3.85197784854621 2.76544545319258 3.37798246714249 2.89030207560898 3.01617535673766 3.24789376857322 3.02251816031998 3.19305875488826 3.10565110212082 2.91307529203353 2.60666051828793 3.06138378586522 3.14497089258504 2.96589000638874 3.37935223845248 3.04288735608031 0.232622848263778 0.235358767783504 0.234552322373203 0.234353002026743 0.229711043507885 0.236268658595357 0.237922079986952 0.240986361285402 0.229711043507885 0.23119029010132 0.231896359270541 0.23475580521023 0.234638876994297 0.233446568931533 0.231261550622085 0.230937223876791 0.229872048570894 0.239588008220252 0.240402348714271 5 5|0 +|/ 22028589 22028948 22028812.222 22028575 22028981 + gene protein_coding_gene TRUE TRUE AT5G54220.1 Encodes a defensin-like (DEFL) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24062.1); contains domain Scorpion toxin-like (SSF57095) -0.332546143214875 -2.81575921420651 0.0173827029134862 1 2.9860161339058 6.23622100723476 -0.332546143214875 0.142281044193834 AT5G03400_at 2.84974406235820 2.36599138558463 3.01146104089836 2.89551278898393 2.52403894516862 2.99649834440309 2.52942241352755 2.70032543096927 3.07331717827057 2.96375299578290 2.74743899122117 2.71606756227454 3.00341660394065 2.7242540101389 2.83589386086218 2.74990915982908 3.28923693950553 3.18104556868611 2.9744793333391 0.193768448980896 0.194044367261086 0.190040024052022 0.186324728128317 0.193915750078980 0.193594101719175 0.190456789169592 0.194953457755842 0.191791477171093 0.197862545934951 0.19296216814661 0.188823294921727 0.186324728128317 0.192757194112228 0.190465829850227 0.187879868752384 0.186324728128317 0.190682236257469 0.201333951435467 5 0|5 /|- 837925 838237 838097.5 837918 839201 - gene protein_coding_gene TRUE TRUE AT5G03400.1 unknown protein -0.307836575731531 -2.81549480332986 0.0173907892188058 1 2.98560471973519 5.6890031379141 -0.307836575731531 0.122354221391891 AT5G16810_at 7.85694239912494 7.17233243752348 7.88870350818988 7.59596453804206 8.49558897995211 8.07241938546147 8.80785578692089 8.05881062564539 7.44160902605672 7.90822759648263 8.78724670313152 8.05882641910407 8.48992619868288 8.73539520551261 8.64835298985173 8.6332668105796 8.86454087833294 8.6083495236116 7.5752006229558 0.169423010530095 0.170678246887654 0.17213377305882 0.173495590693909 0.164491798453028 0.175331095106463 0.167142636594990 0.170494058014822 0.184656589538963 0.165327309121315 0.162578000465108 0.169125077086394 0.163966833832185 0.164405369076486 0.170592997507600 0.163360836791289 0.170728484860439 0.169534606564187 0.173684285694294 5 5|0 -|/ 5526884 5528803 5528149.375 5526767 5529933 - gene protein_coding_gene TRUE TRUE AT5G16810.1 ATP binding / protein kinase similar to Protein kinase [Medicago truncatula] (GB:ABE91723.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.407419597424627 -2.81474403911537 0.0174137698930797 1 2.98443656574966 16.1160357940738 -0.407419597424627 0.196896974502715 AT5G59180_at 5.72739394561285 5.83413280861145 7.31392359287142 7.02956374652101 7.47873898816312 6.60407873250685 5.84242525651743 5.7816862642614 4.15379609284160 4.22984411537426 5.49490234991134 6.12997101866114 5.89176110830161 5.64366466515501 5.86070931474512 5.56204149943121 5.0736546961148 4.8673956386818 4.11397184821371 0.251918916529956 0.252167281484092 0.252695188397925 0.256232673586813 0.261732025526950 0.267079159496846 0.259235801631338 0.256921476267875 0.257639915632699 0.258763019769207 0.253631235018914 0.251918916529956 0.253296531330993 0.252839028406829 0.253355860712189 0.251918916529956 0.275418277123598 0.257322875164225 0.251918916529956 5 5|0 +|/ 23900751 23902172 23901574.111 23900643 23902434 + gene protein_coding_gene TRUE TRUE AT5G59180.1 DNA-directed RNA polymerase II Identical to DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5) (RPB19) [Arabidopsis Thaliana] (GB:P38421); similar to RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G14660.1); similar to DNA-directed RNA polymerase II 19 kDa polypeptide (RNA polymerase II subunit 5) (GB:P46279); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029); contains InterPro domain RNA polymerase Rpb7, N-terminal; (InterPro:IPR005576) 0.355989032940462 2.81060544829720 0.0175409979482985 1 2.97799735895802 11.3171845278091 0.355989032940462 0.160575099200756 AT5G38910_at 1.06333038277163 0.863813806220702 1.44508825657247 1.71147133450964 1.24504969659349 1.28180738033316 1.03402966605920 0.753428324056988 0.704386245632768 1.07922050491700 1.19659631631155 0.926271181901011 1.07956738180574 1.05599683273934 1.19153408256667 0.787884880258138 1.45792060501660 1.17790469374042 1.04128164936643 0.195081377290603 0.195301685225541 0.205294136158438 0.206801673865586 0.197991383492216 0.195081377290603 0.199187542935653 0.196945975224953 0.195239205278736 0.204429493978078 0.202338748036767 0.20086767260441 0.200917002812179 0.199588178403246 0.195081377290603 0.19941209131314 0.196655982501875 0.199137623645582 0.197518311688941 5 5 + 15596297 15596748 15596499.909 15596041 15596814 + gene protein_coding_gene TRUE TRUE AT5G38910.1 germin-like protein, putative Identical to Putative germin-like protein subfamily 1 member 9 precursor [Arabidopsis Thaliana] (GB:Q9FMB0); similar to manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G38940.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) 0.257976166605739 2.80545213707753 0.0177007222521474 1 2.96997995849952 2.20017183760524 0.257976166605739 0.0756023220687216 AT5G11890_at 3.42277247451308 4.22536906835618 3.11668713581089 3.73359562373221 4.02151453652711 4.33656316782873 2.86300683968207 2.62389031427651 3.46895073246107 2.62717961298368 5.05966619539308 5.36154302923214 4.11749005588564 4.87500210504651 5.10196290972673 4.80389492768739 3.18621255843813 4.85082928371935 3.12387450550791 0.263323751080564 0.266298371203366 0.270051390844443 0.269568516945918 0.264842536682847 0.268239297412637 0.263323751080564 0.269003805335234 0.266105620296444 0.266761992700106 0.263633827894716 0.263323751080564 0.267516824360308 0.264756226918346 0.264570810857107 0.263323751080564 0.278077988016593 0.267423382321418 0.263323751080564 5 5 + 3832045 3832419 3832228.182 3831665 3832945 + gene protein_coding_gene TRUE TRUE AT5G11890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17620.1); similar to Heavy metal transport/detoxification protein; Harpin-induced 1 [Medicago truncatula] (GB:ABE94112.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.39306725960348 2.80278913593222 0.0177838304065505 1 2.96583719606836 7.41437993682019 0.39306725960348 0.188078634020710 AT5G57830_at 2.5079885001119 3.07036062142482 2.89566482250919 3.36806164596339 3.74258754916427 3.45029984814323 2.94382583123882 3.00248476591105 2.90867957076822 2.93237800962863 4.66999370899815 4.39959988162436 3.41071370496981 3.97748592695429 4.20952384833966 4.15924410849915 3.81203606252856 4.11281501611273 2.76816929549994 0.236303727795356 0.235001331035723 0.238911301719160 0.242613056824391 0.239511995357855 0.244209375795278 0.241809556110881 0.237328159599888 0.245950305989699 0.234081390633848 0.234081390633848 0.236958514235688 0.234081390633848 0.236816875895711 0.243410962461319 0.234081390633848 0.236410745170699 0.243245952170264 0.241956401665242 5 5 - 23446740 23447368 23447049.545 23446517 23448222 - gene protein_coding_gene TRUE TRUE AT5G57830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30830.1); similar to Protein of unknown function DUF593 [Medicago truncatula] (GB:ABE79503.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.32439267934451 2.80146238499385 0.0178253819076451 1 2.96377327488151 6.6044936101678 0.32439267934451 0.137171791269230 AT5G28070_at 0.948764595853497 1.04601482116483 1.06020187854078 1.15293819170805 0.804682234368796 0.710193236376492 0.979996535452362 0.929275936246448 1.10558609328730 1.62468728107355 1.09164852154498 1.24661285982185 0.955539514416058 1.19050086108607 0.856106998388776 0.787524764448513 1.20452123736471 1.05130526882015 1.2290598973901 0.185040668094443 0.191984349835742 0.196641410693762 0.183034284744871 0.187664349687712 0.189328351035704 0.187677422503602 0.193106297598404 0.201202308803392 0.211122613039906 0.186709035490830 0.190593577646797 0.193422542460108 0.203621484474755 0.183681311807567 0.188879783591587 0.194295069521934 0.195886267109238 0.1965080449411 5 5|0 +|/ 10083194 10083440 10083373.25 10083174 10083523 + gene protein_coding_gene TRUE TRUE AT5G28070.1 unknown protein -0.227876682034060 -2.79868912405873 0.0179125496256363 1 2.95945928874234 2.13788230895726 -0.227876682034060 0.0297525108501962 AT5G24170_at 5.46326523863751 5.6422128029699 7.37100510139315 7.35033263446131 7.86986096927478 6.43472949679184 6.36636828158701 6.5567511940193 5.15150683740869 5.81354704538807 7.54104153451086 7.33878254678911 7.75518487346084 7.47010320571665 7.0613709637252 7.24225382767593 6.9440519305869 7.56728874267657 5.67702535557561 0.265992189714877 0.258017684221775 0.273469907881394 0.257488870752957 0.261829107446786 0.278373437831512 0.258726769446732 0.258196010147985 0.264587908310847 0.257488870752957 0.263599227096432 0.257488870752957 0.261332306259752 0.279008056144711 0.263399260989255 0.257488870752957 0.275082862506682 0.267566813996083 0.26683627254363 5 5|0 -|/ 8189961 8191265 8190556.556 8189486 8191394 - gene protein_coding_gene TRUE TRUE AT5G24170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23550.1); similar to Os01g0219100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042417.1); similar to Os02g0564500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047161.1); similar to hypothetical protein, conserved [Leishmania major] (GB:CAJ02001.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 0.487360769227021 2.79563700671844 0.0180089753304327 1 2.95471177237559 13.0880004395253 0.487360769227021 0.252464014302236 AT5G57860_at 5.99402059334258 6.08266643462161 7.35633535926351 7.12938644980132 7.5727883431487 6.8445704658073 6.11479752705179 5.43728267043561 4.87736754199382 4.99134621394427 6.60127714566961 6.6373062278117 6.69172022702844 6.59557255185355 6.16452255707871 6.87782800865933 5.99537498791857 6.48501246817601 5.10990861264594 0.168636005982523 0.169004590695064 0.169160738400718 0.168158447954674 0.1719408678689 0.182284428914111 0.163953874000077 0.169268475136939 0.168571116074406 0.176324928609336 0.166525021783342 0.173499054822097 0.167270836204449 0.169904426551545 0.176011747237752 0.172282307826648 0.177927078472575 0.177001149074915 0.177370721012573 5 5 + 23455499 23456269 23455656.364 23454823 23456538 + gene protein_coding_gene TRUE TRUE AT5G57860.1|AT5G57860.2|AT5G57860.3 ubiquitin family protein similar to ubiquitin-like protein [Cucumis sativus] (GB:AAL35978.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.376510608548029 2.79335359096729 0.0180814548653489 1 2.95116013271137 12.3159564277520 0.376510608548029 0.177217739414918 AT5G50360_at 2.92932274366354 3.007072852106 3.41768524742509 3.50263552986057 3.40807371316049 3.78106363477132 2.66114113600115 3.02338116641993 3.36950398497339 3.49523294450495 3.02811692046712 3.12203119443619 3.40619747148871 3.01379958217572 2.90484305220385 3.27365410918449 3.8044138892436 3.27478812591476 3.23545424478954 0.219138340936747 0.222928091637143 0.224049271427790 0.225164390775357 0.234117659699432 0.221306313469181 0.216382562466682 0.224973201648509 0.223796861390057 0.214938297082523 0.218456273477174 0.217063461289215 0.225752106201017 0.226275173355084 0.220541712717069 0.217487102129645 0.217379185820167 0.221386251880832 0.217513746410433 5 5 - 20522683 20523204 20522988 20522406 20523564 - gene protein_coding_gene TRUE TRUE AT5G50360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63350.1); similar to hypothetical protein MtrDRAFT_AC135505g13v1 [Medicago truncatula] (GB:ABE82027.1) -0.272341613216417 -2.79331306177126 0.0180827439639605 1 2.95109709470666 6.51390247020697 -0.272341613216417 0.0921588717944272 AT5G23520_at 5.62097864322868 5.85385159703598 7.00098852770298 6.65373646636336 6.93798083035214 6.59098897288689 4.09198192182223 4.62067088533785 4.6158310944992 4.23878300320750 5.3701212384149 5.29914352145057 4.7894140323215 5.7669990782232 4.86929559519803 5.28334418271961 5.51811800597867 5.15390940200267 4.43423698705652 0.221879382532574 0.219456688054953 0.221751226740099 0.229204246178853 0.221555791212828 0.220467324116322 0.230127652295787 0.223713983411731 0.224683515452472 0.221724166493804 0.217041564977805 0.221599993375053 0.218043706773837 0.216388097006488 0.218671319644107 0.217487749763517 0.239849596156688 0.219719492268064 0.220799627405876 5 5 - 7929596 7930311 7929989.727 7929354 7931796 - gene protein_coding_gene TRUE TRUE AT5G23520.1 similar to Os04g0442100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052880.1); similar to P0076O17.10 [Oryza sativa (japonica cultivar-group)] (GB:CAE02512.1); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625) 0.315895329323567 2.79194767812077 0.0181262260282464 1 2.94897344246180 10.7643523107378 0.315895329323567 0.131194289010796 AT5G49990_at 4.44760064479115 5.57530001828711 5.2328712169791 5.88568004390404 7.16108956555404 6.75866124230863 3.79491597014147 3.89900300033291 3.54484265852245 4.06656722280211 4.45914511347766 4.75013497518043 5.33079138452874 5.12280115487113 3.80316972927346 5.23849537122588 5.35649671813237 4.17917390601062 4.01931959324748 0.282846317310828 0.271427357842723 0.280784357853104 0.277085519880779 0.283887695509452 0.28148323923904 0.28719094803224 0.275253208821026 0.275659385797027 0.273258968650723 0.271427357842723 0.274060609845424 0.276649606191535 0.292570618763176 0.277233785137926 0.273017309316688 0.287787308201618 0.272529917712328 0.274320974687053 5 0|5 /|- 20355090 20355616 20355347 20354867 20359107 - gene protein_coding_gene TRUE TRUE AT5G49990.1 xanthine/uracil permease family protein Identical to Nucleobase-ascorbate transporter 5 (AtNAT5) (NAT5) [Arabidopsis Thaliana] (GB:Q8RWE9;GB:Q9FGR4); similar to permease [Arabidopsis thaliana] (TAIR:AT5G62890.3); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G60030.1); similar to Xanthine/uracil/vitamin C permease; Thioredoxin-related [Medicago truncatula] (GB:ABE83225.1); similar to root uracil permease 1 [Oryza sativa (japonica cultivar-group)] (GB:CAJ84113.1); similar to putative permease I [Lycopersicon esculentum] (GB:AAX73299.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) 0.462761345148286 2.79189490813682 0.0181279086409971 1 2.94889136766339 9.67285814725974 0.462761345148286 0.236689686345816 AT5G17320_at 2.69469837220362 2.27055529798515 2.81665253200076 2.59188579882058 1.99475041031872 2.38130752592597 2.03048528723856 2.47896164871239 2.92808308759490 2.81092363669485 2.93857890766432 2.40976884482060 2.74290685222977 2.75867117946264 2.40384830219666 2.56585006065320 2.79043345154536 2.71928409524045 2.61623810736704 0.221231361302967 0.216750579191191 0.226160701804478 0.222737507249559 0.227086549529715 0.242001107845967 0.230771583904998 0.231248490401703 0.219447665235377 0.218313447692838 0.225087534299167 0.216870826940814 0.223382986242974 0.222820952493352 0.219158780031024 0.225471453959975 0.216750579191191 0.216750579191191 0.219704085951172 5 5|0 -|/ 5703457 5704273 5703821.111 5703382 5707639 - gene protein_coding_gene TRUE TRUE AT5G17320.1 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G34650.1); similar to homeodomain protein HOX3 [Gossypium hirsutum] (GB:AAU12247.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.316699497603509 -2.79135664978049 0.0181450803621946 1 2.94805420240644 5.13303677029016 -0.316699497603509 0.131905221113247 AT5G16620_at 8.35795939905918 8.33505291060808 8.97281215147646 8.82296926010831 9.03047640803254 8.60925501028049 8.70412245372947 8.49679038995574 8.36440711233228 8.4060253748778 8.9573909912179 9.11620261021165 9.17752843759122 9.07234637569894 9.29549368052692 9.07807243968565 9.04139804873046 8.80865151219792 8.28379785571845 0.115607866517692 0.119606369665684 0.123485625719526 0.120055268635545 0.115607866517692 0.116648349559116 0.115607866517692 0.116402501452915 0.120230939820778 0.121810578361097 0.120369111901601 0.115607866517692 0.118644834422812 0.120343001406290 0.122813868016684 0.115607866517692 0.128920198967230 0.119652628196754 0.122359541649975 5 5|0 +|/ 5452548 5454232 5453446.667 5450699 5454720 + gene protein_coding_gene TRUE TRUE AT5G16620.1|AT5G16620.2 PDE120 (PIGMENT DEFECTIVE EMBRYO); heme binding chloroplast protein import (Tic40) similar to translocon Tic40 [Pisum sativum] (GB:CAB50925.1); contains InterPro domain Globin-related; (InterPro:IPR012292); contains InterPro domain Heat shock chaperonin-binding; (InterPro:IPR006636) -0.265422635272629 -2.78997277938477 0.0181893038438978 1 2.94590187749026 17.3760775610523 -0.265422635272629 0.0853760671883837 AT5G59060_at 1.82873230726648 1.96054992768570 2.23616576081613 2.0417318220411 2.20542595736651 1.90124324082684 2.04028587460674 2.00012338233833 1.67320696626805 2.48415649326291 1.73029201555699 2.06351105945745 1.94051026306639 1.90353980309603 1.48378390736496 2.00867205491792 1.81382109265546 1.68401552881728 2.22519977768608 0.250831982071515 0.246311812324336 0.240382349389652 0.244728449190249 0.248763803745548 0.257265391496884 0.244514636473957 0.245482623006382 0.251001789306117 0.238778067746921 0.244260633043891 0.241118909096636 0.244291185578794 0.26070383938839 0.241179525048488 0.242071316944502 0.245239114398797 0.241189891868083 0.239914645876125 5 5 - 23861643 23861923 23861800.636 23861527 23862003 - gene protein_coding_gene TRUE TRUE AT5G59060.1 similar to glucose transporter [Arabidopsis thaliana] (TAIR:AT5G18880.1) -0.249239312932997 -2.78910181349791 0.0182171920152701 1 2.94454729922663 4.00480193146293 -0.249239312932997 0.0668718226058457 AT5G06330_at 1.32772274752318 1.72688050560613 1.89122971941512 2.17116924453698 1.55154420238738 1.68945568384493 0.848834919608572 1.50670547133391 1.34199513371668 1.74900344372720 1.81701944664112 2.10342484500935 1.69983186552068 1.71723093898798 2.21475207819881 1.41453613148259 2.27708511052639 2.29364126356358 1.44013306460400 0.200940875473531 0.202358187889486 0.200940875473531 0.206702097364184 0.201644089437926 0.200940875473531 0.204198944260113 0.202150228262155 0.220698283072652 0.202546684205475 0.202039917330800 0.202319256210718 0.208200457289389 0.204160089776055 0.204815141845578 0.200940875473531 0.202746851884327 0.200940875473531 0.209310667949397 5 5 - 1935004 1935489 1935233.545 1934740 1935645 - gene protein_coding_gene TRUE TRUE AT5G06330.1 hairpin-responsive protein, putative (HIN1) similar to NHL1 (NDR1/HIN1-like 1) [Arabidopsis thaliana] (TAIR:AT3G11660.1); similar to Os12g0159600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066211.1); similar to H0913C04.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86171.1); similar to Os11g0157200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065799.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.331069498923723 2.78798173495422 0.0182531195996071 1 2.94280531985465 3.31547652378566 0.331069498923723 0.143698562996137 AT5G55170_at 6.66952637379709 6.40254732166025 7.38770339936119 7.12996907230294 5.84781180551681 6.25163603126733 3.26957983189861 3.57573524391829 4.27722706196233 3.08927276713186 3.78952824566564 4.54036204968474 4.11136192318843 4.59986322266055 4.12528236185379 4.29166730964902 4.64929595803705 5.23481299223485 3.66772915375908 0.284910070667978 0.280945826813214 0.289209872019549 0.2816775314076 0.278421649845042 0.282673786392992 0.273084402934182 0.281996524677908 0.275031179747404 0.282872686847196 0.277504724654927 0.275165198629377 0.274696523006895 0.275839425260639 0.273084402934182 0.273084402934182 0.276381046176796 0.273084402934182 0.278131351925652 5 5 - 22402712 22403269 22402952.818 22402536 22403340 - gene protein_coding_gene TRUE TRUE AT5G55170.1 SUM3 (SMALL UBIQUITIN-LIKE MODIFIER 3) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. similar to SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) [Arabidopsis thaliana] (TAIR:AT5G55160.1); similar to Os01g0918300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045207.1); similar to ubiquitin-like protein SMT3 [Phaseolus vulgaris] (GB:AAM21576.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.289128513542792 2.78711731771423 0.0182808950435073 1 2.94146097872399 9.86473767771007 0.289128513542792 0.108695679695245 AT5G47500_at 1.82362988032374 1.59237646730874 1.89921948445318 1.66446088274088 1.56109746834858 1.61311373071674 1.44238310137269 1.51335769743038 1.61064248541581 2.19385923801855 2.37011558590195 3.31621221761355 2.33177747579706 1.99895008362752 3.20170934563426 3.18391565193967 2.19464710020559 2.58468275142501 1.97739625155419 0.222352064795016 0.227468492231341 0.233207013090077 0.234449776213666 0.223087000423392 0.229625033599487 0.227754865802717 0.222352064795016 0.224135361573192 0.224467068723852 0.227692987086476 0.237563467577660 0.229301187117501 0.222352064795016 0.231647949872733 0.235771629798141 0.230646093974852 0.226312072554308 0.222352064795016 5 5 - 19288489 19289265 19288837.727 19288186 19290110 - gene protein_coding_gene TRUE TRUE AT5G47500.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19730.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD65006.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD64977.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) 0.243079444414942 2.78610119104837 0.0183135992624359 1 2.93988072860897 3.92623013984400 0.243079444414942 0.0590247897662991 AT5G04750_at 10.0465880547000 9.93698371742087 11.0718518392455 10.9138782690406 10.9356596786966 10.5154384698986 9.7211535574388 9.53054409147288 9.30823232534635 9.4988736846726 10.2604385361834 10.0628752802323 10.2894335749177 10.3324080344971 9.9394717620308 10.3749074818189 10.1685400122583 10.1625380707746 9.3858701789087 0.0921847943527377 0.091764738922566 0.088964832603438 0.0898955369540238 0.0893545704411825 0.0930265395968933 0.0918430630813482 0.0927514932730848 0.103475003016256 0.0926242069503013 0.0908703914918813 0.0895585431876897 0.0904474679412931 0.090379700125065 0.0936290594835639 0.091588066165925 0.101239772033842 0.0926421256808993 0.0915349168328158 5 5|0 +|/ 1372212 1372338 1372276.3 1372148 1373620 + gene protein_coding_gene TRUE TRUE AT5G04750.1|AT5G04750.2 F1F0-ATPase inhibitor protein, putative similar to Os08g0558900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062498.1); similar to Os02g0533800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047032.1); similar to F1F0-ATPase inhibitor protein [Oryza sativa (japonica cultivar-group)] (GB:BAA81661.1)| 0.266065818913273 2.78544107500992 0.0183348765588491 1 2.93885415283229 20.1322548716051 0.266065818913273 0.08650770397776 AT5G48530_at 1.74553226209475 1.83133230010005 2.79516945457147 2.12130039666952 2.25631887682761 2.03360093713291 1.75756643393237 1.65600809129842 1.87075238987596 1.41948975815158 1.99704711692514 1.89217893587712 1.56158165125594 1.95408192788547 2.11366111464471 2.43513923390248 2.15726456633935 1.99432499849592 1.62194804475912 0.217811411421954 0.218691033399006 0.217240875685513 0.219873090760757 0.211808516405506 0.207122442120293 0.206961102201918 0.224490540393979 0.223118549892935 0.220635504673089 0.206961102201918 0.221139344221735 0.211784628480868 0.225113763527731 0.206961102201918 0.211539410730563 0.214288964568159 0.221835248111501 0.207809389165102 5 5 - 19685800 19686026 19685920.909 19684122 19686056 - gene protein_coding_gene TRUE TRUE AT5G48530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G07440.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22058.1) 0.307629727350437 2.78539842507400 0.0183362521296186 1 2.93878782648883 3.84988193112571 0.307629727350437 0.124956795766988 AT5G67460_at 2.60963315250339 2.60949458465617 2.34874205411109 2.55507025611529 2.01678348874455 2.39990369119082 2.55006446421329 2.35175579771132 3.27205620874426 2.16986868272042 3.1095341204537 3.36505232610931 2.85748307091298 2.92074459402999 3.54073319333429 3.1753825105668 3.20979005748181 2.99844802924346 2.96145297332454 0.227303801728232 0.226409799092799 0.224117719222458 0.229255563297159 0.231350981170848 0.229937388207651 0.224875948729439 0.227508618956523 0.235021977020647 0.232941614453432 0.232384607986162 0.227928555474160 0.229970560272672 0.231920627904257 0.227084948469689 0.224117719222458 0.224117719222458 0.234613051454448 0.226018151437236 5 5|0 -|/ 26939211 26939779 26939522.4 26938810 26940500 - gene protein_coding_gene TRUE TRUE AT5G67460.1 glycosyl hydrolase family protein 17 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79480.1); similar to AT5g55180/MCO15_13, putative [Medicago truncatula] (GB:ABE77420.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.262350813108492 -2.78341637963045 0.0184002921815445 1 2.93570554416051 5.40431690750388 -0.262350813108492 0.0827553776744128 AT5G64850_at 5.67172989373063 6.07419606129604 6.44793152336016 7.2830452189955 6.86815898516559 6.58718872328668 7.22094130588554 7.7917318876973 7.35779163815315 6.88943338497467 8.753081772733 8.81940959517997 8.52728682227403 8.1923120557778 8.4216674309252 8.63547754663902 7.02863444818083 7.45522926458426 7.05607464442678 0.241006371217681 0.233355431757028 0.231392232160479 0.236189444184953 0.230469005338280 0.247523285429047 0.231529435875458 0.243946987884954 0.240686564819699 0.229776432298559 0.229776432298559 0.232681931488282 0.235059299918336 0.242437700349223 0.233238829608312 0.230717585969409 0.242743376966746 0.233204516434062 0.239132947635262 5 5|0 +|/ 25939090 25940221 25939334.1 25938635 25940584 + gene protein_coding_gene TRUE TRUE AT5G64850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09960.1); similar to 80C09_15 [Brassica rapa subsp. pekinensis] (GB:AAZ41826.1) -0.399449396091891 -2.78262161922305 0.0184260337258455 1 2.93446964571231 14.408234078038 -0.399449396091891 0.194572253113139 AT5G08400_at 5.91049848600622 6.06562360772173 6.36722515091695 6.06646710420639 7.18026566612184 5.99765546172419 5.68454225816262 4.81550485926520 3.16641483594033 3.87765306340479 3.54346143094251 3.2641009051005 3.81932823844865 3.3990023865658 3.7509005746412 3.49787182344239 4.51646850202881 3.08704590349581 3.72627022689725 0.311235344543971 0.302848118597694 0.302360023922481 0.304088392937405 0.299956939159783 0.312073631613484 0.295902153323893 0.299472932991778 0.309580696046546 0.294325982095346 0.298323038231279 0.298053691725626 0.302863650739729 0.293645805554039 0.297876190751992 0.293645805554039 0.309646656975468 0.310247385473237 0.299381205199309 5 5|0 -|/ 2707469 2708215 2707812.5 2706459 2708947 - gene protein_coding_gene TRUE TRUE AT5G08400.1|AT5G08400.2 similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT4G29400.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD23058.1); similar to Os02g0827600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048595.1) -0.497375214883942 -2.78146383858278 0.0184635975966560 1 2.93266926584242 9.61091541393098 -0.497375214883942 0.26063618669126 AT5G57230_at 3.37615370450339 3.34263418909436 3.88925540073218 3.67194365860827 4.72576040726582 4.13448804021215 2.53647092933973 2.73336365326073 2.51841945164763 2.37071898388016 2.91048171500100 2.8950153184993 3.16154465403504 2.82169024982355 2.88352496041802 2.47363624905481 2.96064903037844 3.08825563546263 2.53581528439813 0.252429581369277 0.238313220383970 0.240661799155118 0.242501905852876 0.236395821892121 0.245353649126636 0.231233526409961 0.231233526409961 0.240384741741341 0.235251096123983 0.232600368551094 0.231886240261197 0.231233526409961 0.231233526409961 0.236530123120944 0.236662284762692 0.244693440032497 0.233418458315867 0.237351576819592 5 5|0 +|/ 23207946 23208643 23208133.444 23207798 23208711 + gene protein_coding_gene TRUE TRUE AT5G57230.1 similar to Os06g0482200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057653.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.294848941163414 2.78118280522585 0.0184727271869974 1 2.93223225794039 6.23842589782345 0.294848941163414 0.114362518005762 AT5G52530_at 6.99799276246424 7.02726588147551 7.98430406431924 8.09164700115707 8.06821610318213 7.53078885334542 6.49444911335056 6.57158226694614 6.13145242285743 5.88785718954518 7.43915399500555 7.52812683434037 7.1287273456145 7.57492459463628 7.55038734840285 7.72529231869418 7.6494341120596 6.84737218336087 5.87228208460922 0.201762998273161 0.207891499557724 0.204541240536992 0.203461013703342 0.198141205568488 0.209329488178977 0.205444895941745 0.202628400281095 0.213600158413462 0.199433778526919 0.195990844514059 0.196309789426171 0.201330833525189 0.199311571938556 0.202016584486755 0.196077120818542 0.205444134777498 0.203599978090397 0.205380208827857 5 5 + 21337559 21338071 21337770.182 21334366 21338462 + gene protein_coding_gene TRUE TRUE AT5G52530.1|AT5G52530.2 dentin sialophosphoprotein-related similar to Os08g0430000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061852.1); similar to hypothetical protein DDBDRAFT_0192009 [Dictyostelium discoideum AX4] (GB:XP_629009.1) 0.274854682967320 2.78035627132657 0.0184996039553853 1 2.93094700946154 14.0429263760391 0.274854682967320 0.095909916353798 AT5G53020_at 6.14280822451173 6.38160395335492 7.15343830063132 7.03753565891111 7.63946914446717 7.2078489627792 6.93217485856104 7.01775227865986 6.60548908799336 7.30754370293718 8.13738171755626 7.9634301947105 8.38527319084121 8.33458840797905 7.25475165937958 8.16730670687419 7.56835805358479 8.08805366872012 7.50459210124354 0.162859268936369 0.150563603513709 0.153807373288513 0.156158232791400 0.157964778569032 0.158051197651896 0.159091787543120 0.154921562463881 0.172253030452766 0.167445792080165 0.151070671968515 0.153685387632975 0.153420878747911 0.152551631451677 0.154710355947361 0.149879555160432 0.156689784338755 0.153629061199601 0.164630103938302 5 5 + 21518775 21519429 21519214.727 21517125 21519627 + gene protein_coding_gene TRUE TRUE AT5G53020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45900.1); similar to putative 200 kDa antigen p200 [Oryza sativa (japonica cultivar-group)] (GB:BAD88062.1); contains domain gb def: Emb|CAB82814.1 (PTHR21596:SF5); contains domain RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED (PTHR21596) -0.267475937541192 -2.7758726334328 0.0186460829922902 1 2.92397540575414 14.5023795464081 -0.267475937541192 0.0889299442392483 AT5G06790_at 1.09255752560520 1.31386324899587 1.74358956749224 2.05367238577523 2.19378675512631 1.93181158751004 2.40989527138889 3.08870344505725 1.90113396421249 1.98408474143799 2.78724948090604 3.20810229935199 2.70283822327053 3.13677723789144 2.3462702477272 3.13485767685667 2.69546119527319 2.36974702738701 1.40146665863771 0.24973931790634 0.241665133317827 0.258701628600088 0.242492220516940 0.240565709240697 0.244779618767891 0.244673371852096 0.249602854332745 0.248595026733814 0.241308823281029 0.241146387587496 0.236814166383742 0.237557246122865 0.251579251090334 0.237835374403626 0.238855799659803 0.248295351799536 0.241957024863615 0.241189931616844 5 5 - 2098259 2098627 2098452.636 2097670 2098741 - gene protein_coding_gene TRUE TRUE AT5G06790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G57950.1); similar to Os09g0279200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062757.1) 0.327627884769133 2.77572746685579 0.0186508448630457 1 2.92374969754484 4.25843066254175 0.327627884769133 0.142130365614350 AT5G11240_at 2.78094563707415 3.35671085540781 4.02947469570262 4.51111742016983 3.4769945960225 3.40120581949376 2.94229830161236 3.61837308907223 1.91989856633732 2.1124010271212 2.9852930129352 3.81211855859920 3.0750537930261 3.30214747169833 2.95745861086908 3.48577508567743 3.41390181747405 2.63812517303238 2.59088243538481 0.218853847143918 0.213061878404422 0.217575688154227 0.229500479081002 0.217965892109669 0.207077668932544 0.209296376212807 0.212403428582464 0.210644616384598 0.214751913044706 0.209125861491092 0.213045665798313 0.220625478927848 0.209970554713068 0.21773077890236 0.212575482920076 0.214793659358738 0.222443492161595 0.212898548218714 5 5|0 +|/ 3585732 3586547 3586203.4 3582541 3586987 + gene protein_coding_gene TRUE TRUE AT5G11240.1 transducin family protein / WD-40 repeat family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15420.1); similar to Unknown (protein for IMAGE:8332239) [Xenopus laevis] (GB:AAI25999.1); similar to LOC398447 protein [Xenopus laevis] (GB:AAH79723.1); similar to Os03g0300300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049856.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Protein of unknown function NUC189, C-terminal; (InterPro:IPR012979) 0.371485300983452 2.77549717240518 0.0186584016602811 1 2.92339163208336 6.22287081850028 0.371485300983452 0.175316106706504 AT5G27810_at 2.15310969340248 2.2056479566089 2.32918520940039 2.66418239082709 2.14995294494641 2.36043367239802 2.15985509274508 2.54204612093286 2.62414170135370 3.2393125728165 3.01123475818792 2.85065924994973 2.72094850336889 2.89497138413852 2.04839467289236 2.92249788843246 2.42256666734236 2.90757005412563 2.54289259198264 0.191265365923968 0.193413746541563 0.197364825946868 0.199095087285055 0.192272702063185 0.193801298593840 0.203754445772288 0.191265365923968 0.198256515954253 0.199795338157794 0.203448316174395 0.191682741991302 0.203705845049936 0.195973709927848 0.197896971686147 0.194205156380134 0.203509068481392 0.201908163541866 0.200020377230282 5 5 + 9855836 9856121 9855955.636 9855831 9856190 + gene protein_coding_gene TRUE TRUE AT5G27810.1 sequence-specific DNA binding / transcription factor similar to AGL80/FEM111 (AGAMOUS-LIKE80), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G48670.1); similar to putative MADS-box protein AGL35 [Oryza sativa (japonica cultivar-group)] (GB:BAD81343.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.273944228043184 -2.77404265132362 0.0187062005232162 1 2.92113016096803 5.08278714483549 -0.273944228043184 0.095628243983433 AT5G67530_at 7.1324463295301 7.35621244661745 7.9733639407117 7.80077525319777 8.39057061469086 8.0043466027682 7.44494898845757 6.65401792640657 7.46485356377778 7.39111825209617 7.74485327020507 7.7691047387552 7.45588063807515 7.65184499414314 7.70036371683189 7.89394860539463 7.71369517034301 7.87553038124507 7.26966507422456 0.158891943782792 0.153008644092364 0.153323598637395 0.156192488763919 0.158289804201937 0.155950845784378 0.156630890171575 0.157961492857889 0.177012463149542 0.153162601767142 0.154893105706252 0.152519246502520 0.158462215833672 0.157706943766683 0.164043564714148 0.154572628937160 0.156510443984172 0.151757459193371 0.160459668074004 5 5|0 +|/ 26960394 26961050 26960711.5 26958408 26961372 + gene protein_coding_gene TRUE TRUE AT5G67530.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT1G01940.1); similar to Os03g0201100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049295.1); similar to peptidylprolyl isomerase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94499.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130); contains InterPro domain U box; (InterPro:IPR003613) -0.349917919050500 -2.76890784904855 0.0188759223114286 1 2.91314721472530 15.1450177558344 -0.349917919050500 0.159979565906609 AT5G56230_at 3.84410850704075 4.09205342547745 5.16787168789974 5.3786901761358 4.63257466277446 4.89095727025654 2.67598803753588 2.79617591623786 4.11655057660813 3.39230022854002 4.09253034492701 3.96569596380406 4.14701894621386 4.78536706200494 3.59161613126022 4.39756683475656 4.04455184386588 4.57703562789654 3.97454197546325 0.238182320324547 0.239305530398743 0.242348204324007 0.237639052792282 0.247510016567979 0.234953697535248 0.258617363907697 0.246193486905965 0.245899577746527 0.239982836824112 0.241379108458204 0.234558478052394 0.238387967391798 0.234558478052394 0.234558478052394 0.242437360050498 0.241476871884369 0.239194602051742 0.241108790275868 5 5 - 22775998 22776508 22776193 22775994 22776597 - gene protein_coding_gene TRUE TRUE AT5G56230.1 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT1G55640.1); similar to prenylated rab acceptor family protein [Thlaspi caerulescens] (GB:AAY18432.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) 0.253897038487128 2.76800765780339 0.0189058346453900 1 2.91174780511268 8.19878767935894 0.253897038487128 0.0748604583709557 AT5G52480_at 1.93363937606563 1.90143061605225 1.32998771358448 1.70744771355665 1.52274846026887 1.74341100000523 1.60593299917755 1.42258854228608 1.99461576866975 2.16539337383926 2.03928018105091 1.94273723231234 1.80899861309494 1.65997981213434 2.16471141572961 2.20953678440235 2.02214702064283 2.03713084096869 2.0679785680344 0.188216825855345 0.186688008118148 0.192911987781184 0.191982113391178 0.18900331242859 0.190409003030495 0.184241762524042 0.188968162372011 0.189748004425912 0.188233728495377 0.19312325585849 0.188554437742284 0.186066803061343 0.186439729507697 0.183871200172339 0.183871200172339 0.193462806422245 0.186472187685958 0.189736274079513 5 5 - 21314182 21314564 21314379.273 21314059 21315084 - gene protein_coding_gene TRUE TRUE AT5G52480.1 protein binding similar to F-box family protein (FBL20) [Arabidopsis thaliana] (TAIR:AT4G05460.1); similar to Os02g0317300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046671.1); similar to Os08g0193900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061182.1); similar to N7 protein [Medicago truncatula] (GB:CAA76808.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.260386709128933 -2.76762312811465 0.0189186265605237 1 2.91115003583860 3.67667887315283 -0.260386709128933 0.0822365890209229 AT5G05130_at 1.85193758046146 1.47700064094713 1.81140847013912 2.46909923264898 2.08082013122401 2.42300668815273 1.5127193543337 1.58537141228281 1.34171726025275 1.91607959058741 1.94603470130607 1.87175351233279 2.05580922468957 2.03552985021824 2.06747330033657 1.69426554436792 2.0801775154468 1.95260478499217 1.54912187907399 0.202311825496846 0.204159341117899 0.201944176549088 0.202415778614075 0.203773601427949 0.199139114846060 0.199554040754435 0.202641226565025 0.219475490899709 0.201687087254286 0.201948626051671 0.202140277987588 0.208176971180241 0.204440391950988 0.207454613731514 0.199792868411469 0.202555725662303 0.198728682526723 0.200673424212786 5 5 + 1514338 1514795 1514511.545 1512121 1515080 + gene protein_coding_gene TRUE TRUE AT5G05130.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein Identical to Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) [Arabidopsis Thaliana] (GB:Q9FF61;GB:Q8RWB4;GB:Q8RWC7); similar to RAD5, ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22750.1); similar to Os07g0642400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060436.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG13358.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.329315167588208 2.76655433832996 0.0189542267708914 1 2.90948858009979 3.68405158753173 0.329315167588208 0.14432227846145 AT5G59510_at 0.468116836109924 0.403120635065472 0.475192355983947 0.539834662494583 0.437022161958021 0.330871273797454 0.698414260851259 0.644315565847682 0.973591592002783 0.312956165645418 1.53950110483463 0.942603444853446 1.66464380702156 1.73756210019867 1.74030208168470 1.55235357866629 0.597775686528374 0.84366795417083 0.70277032626321 0.185935584988481 0.180716862237368 0.189548898675813 0.184511468116831 0.184102309641295 0.183699876965335 0.183453809851455 0.186201435383207 0.18839551373883 0.18596232365995 0.185682979644671 0.182764109462699 0.180716862237368 0.189186097655364 0.186645349654060 0.181029926049242 0.183108856374508 0.185908483779607 0.180716862237368 5 5 + 24007351 24007695 24007514.182 24007300 24007922 + gene protein_coding_gene TRUE TRUE AT5G59510.1 DVL18/RTFL5 (ROTUNDIFOLIA LIKE 5) similar to DVL15/RTFL4 (ROTUNDIFOLIA LIKE 4) [Arabidopsis thaliana] (TAIR:AT3G46613.1); similar to hypothetical protein MtrDRAFT_AC135467g8v1 [Medicago truncatula] (GB:ABE81994.1); contains InterPro domain DVL; (InterPro:IPR012552) 0.223839849542948 2.76559637232206 0.0189861924282155 1 2.90799943697076 1.49481459287118 0.223839849542948 0.0260145621627400 AT5G13170_at 1.10228027015444 1.24613461331594 2.82327013451988 2.85353463506133 1.54280180952763 1.94426468328697 2.54148714314293 2.73325089902409 1.89008169213572 1.83353666785377 1.84567667229641 1.97204388697593 2.10239388697264 2.08600935578361 2.01748799527417 2.67287673102948 3.35972818139602 2.34094477553271 1.68582985651100 0.203428692087995 0.203398893348258 0.199470583083824 0.20658404394026 0.202926073209262 0.202389495982118 0.199470583083824 0.204638495038866 0.200051600019541 0.205908227646127 0.199470583083824 0.201574502510950 0.214620884200427 0.201648315911869 0.201146685258389 0.204738851233306 0.219860351674552 0.214464694176831 0.199470583083824 5 5|0 -|/ 4181348 4182062 4181742.6 4181045 4183309 - gene protein_coding_gene TRUE TRUE AT5G13170.1 nodulin MtN3 family protein similar to MTN3 (ARABIDOPSIS HOMOLOG OF MEDICAGO TRUNCATULA MTN3) [Arabidopsis thaliana] (TAIR:AT5G23660.1); similar to MtN3 [Medicago truncatula] (GB:CAA69976.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 0.259094560034144 2.76498909222229 0.0190064841887669 1 2.90705544670741 4.14977531908304 0.259094560034144 0.0810878441946538 AT5G51380_at 2.19051504266018 2.01307054499116 2.70298982302356 2.65015409850136 2.52428057197849 2.46685026384581 2.20630509045837 2.003162959829 2.36408695664448 1.88590972788411 2.4669100118811 2.4387275188796 2.36565783980923 2.31863428720746 2.62295487187169 2.60639611045107 2.51165253056333 2.67163113890125 1.90133356656343 0.191351417092367 0.188067621656435 0.188067621656435 0.192296545715803 0.189649093149355 0.190756636697577 0.190667234311342 0.192494487719269 0.191538341122956 0.204513361677632 0.208914160801975 0.188299102360317 0.189273285890630 0.190724023389911 0.190530273503708 0.188067621656435 0.189739942832523 0.188067621656435 0.195029896006491 5 5 + 20894074 20894940 20894488.636 20893102 20895215 + gene protein_coding_gene TRUE TRUE AT5G51380.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G51370.2); similar to Os02g0658500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047636.1); similar to putative F-box and leucine-rich repeat protein [Jatropha curcas] (GB:ABI64127.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.234378337932558 2.76455156227817 0.0190211173126209 1 2.9063753338841 4.62004802727412 0.234378337932558 0.0485920513979104 AT5G28150_at 5.32563617667504 5.84884358488139 5.76197079504265 6.30654702735154 6.31253060660757 6.13654608128896 6.24672968310862 6.47188686231856 5.79240560704771 5.62184554088186 7.07313081287148 7.45771366619892 6.64587544931196 6.90987977378914 6.85245119382404 7.25159976505687 6.57450048410432 6.9016380595529 5.62369493023476 0.206197662153689 0.208857864324899 0.223454173278112 0.219341332470578 0.20392429894709 0.205467048586928 0.208046667364176 0.210333521483312 0.222087175855256 0.224377850303698 0.211179283791007 0.211045495354128 0.209912272432922 0.20392429894709 0.213715141840009 0.211443055299155 0.219349636214779 0.22645827168968 0.209255884351193 5 5 + 10136129 10136661 10136468.182 10135438 10136981 + gene protein_coding_gene TRUE TRUE AT5G28150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04860.1); similar to Os07g0572300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060057.1); similar to Os03g0806700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051637.1); similar to Protein of unknown function DUF868, plant [Medicago truncatula] (GB:ABE92686.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) -0.323084375060199 -2.76267939722193 0.0190838587830894 1 2.90346524964338 12.3701683571477 -0.323084375060199 0.139732995880949 AT5G55760_at 5.12033455992075 5.38764673283541 6.12359514368261 6.16772447001664 6.22065362785327 6.14702254663567 5.78947067553185 5.22820071683114 5.06905377400348 5.05189716491372 5.89979756068648 5.74321577265236 5.51770294175923 5.73569789658669 5.82522042883107 5.92350211520409 5.95795468853176 5.78885358932982 5.36932987072625 0.242259192642941 0.242259192642941 0.248078744162515 0.251162165011986 0.245450260538010 0.256702614959264 0.244161374754248 0.24311848885436 0.249641359920889 0.246312493125977 0.246174619151987 0.24326299452216 0.246775321660707 0.247959656049827 0.244984727513609 0.243157102343834 0.260123170803387 0.243248138618824 0.242259192642941 5 5 + 22587160 22587865 22587532.909 22584448 22588189 + gene protein_coding_gene TRUE TRUE AT5G55760.1 SRT1 (SIRTUIN 1); DNA binding similar to SRT2 [Arabidopsis thaliana] (TAIR:AT5G09230.7); similar to SIR2-like histone deacetylase [Zea mays] (GB:AAK67144.1); similar to Os04g0271000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052343.1); contains InterPro domain Silent information regulator protein Sir2; (InterPro:IPR003000) -0.286418422920307 -2.76195366018987 0.0191082358061831 1 2.90233720212133 11.2542910895362 -0.286418422920307 0.108604548632879 AT5G46030_at 9.58377173031229 9.57989794025787 10.6415007217298 10.5720800542800 10.8005452240706 10.5579591953702 9.87782284899208 9.4680610507539 9.63636216851618 9.43202638057085 10.5273374066192 10.2976625843804 10.2398302961860 10.2042625611141 10.2033707215327 10.4417047598325 10.1449286651038 10.2767558357569 9.2986596038137 0.117928600916728 0.113361695749803 0.109199540253192 0.106298094578755 0.109472664359504 0.111011933806689 0.108200666059205 0.110711075900867 0.122099737502457 0.110873506213950 0.108138397623939 0.108192234668483 0.106764777058750 0.124256515225876 0.109857713762505 0.108258745678476 0.108976422415011 0.108475765273013 0.117684442094822 5 5|0 +|/ 18687773 18688324 18687970.556 18687344 18688600 + gene protein_coding_gene TRUE TRUE AT5G46030.1 Identical to Transcription elongation factor 1 homolog [Arabidopsis Thaliana] (GB:Q8LEF3;GB:Q9FNL9); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69422.1); similar to Os07g0631100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060360.1); similar to Os02g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045811.1); contains InterPro domain Protein of unknown function DUF701, zinc-binding putative; (InterPro:IPR007808) 0.260553158459475 2.75923582640861 0.0191998026202217 1 2.89811291778465 20.0090370064455 0.260553158459475 0.0832799292616875 AT5G58280_at 1.89095149130006 1.52256230935312 1.66057424760124 1.66053644336419 1.51646880796301 1.46008674059816 1.51653691408743 1.92399664231361 2.00878894556909 2.08094248814119 1.83203485469928 1.90424352887174 2.18568350928249 1.98760193593060 2.18180279427116 2.12949938439821 1.60358940872847 2.09784193272166 2.21872853367634 0.183737472213101 0.187504864012051 0.190515693074900 0.193887435181768 0.192811059997202 0.18946493744319 0.188013975926579 0.187710686240557 0.193687299314388 0.191140774936744 0.188678953636109 0.190495471226924 0.187927250237214 0.197156869566969 0.186424581989758 0.190956652234063 0.200868504651791 0.18748443155215 0.184539705847518 5 5|0 +|/ 23585059 23585845 23585395.444 23584564 23585896 + gene protein_coding_gene TRUE TRUE AT5G58280.1 transcriptional factor B3 family protein similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G19184.1); similar to Os05g0481400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055860.1); similar to Transcriptional factor B3 [Medicago truncatula] (GB:ABE87425.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.271926979700548 -2.75432300318872 0.0193664341888699 1 2.89047770636075 3.69051777844352 -0.271926979700548 0.0955589235512981 AT5G43000_at 1.85701148808805 1.94522373498128 1.35760983832498 1.75727042258637 1.45193733954615 1.52726595265520 1.57172968729655 1.574699806593 1.84048130847912 1.77067945529889 1.34911367247357 1.56194631297908 1.71591068691376 1.94740980375018 1.79633328575806 1.46994837337557 1.42136800727437 1.94127917580668 1.47527908712378 0.218363097693301 0.211692825125038 0.225072917306902 0.217662974492259 0.211629531795736 0.215700702439657 0.216765932987551 0.213312825829342 0.219469776195806 0.225257280748957 0.215347286166597 0.217602155689802 0.215057962549434 0.215650759420667 0.211629531795736 0.21805613030455 0.224023320460541 0.212117327882650 0.219391277328465 5 5 - 17263649 17264148 17263923.636 17263582 17264430 - gene protein_coding_gene TRUE TRUE AT5G43000.1 unknown protein -0.250145157638671 -2.75303729861114 0.0194102801416855 1 2.88847969605789 3.30329034130495 -0.250145157638671 0.072019272843178 AT5G24930_at 11.7368046056558 11.7851901872865 12.1767399444067 12.0477960808191 12.5005730720658 12.1103937120480 12.4183316784909 12.2606496921221 12.4713939516521 12.514084752616 12.9074376090016 12.8526358293182 12.7953310927676 12.8121900230053 12.6809451633522 12.8901668967703 12.5901250311153 12.7433838075513 12.5230515579778 0.065176887690528 0.0621446462992104 0.06496329477362 0.0626608647765063 0.0621446462992104 0.0650628968231457 0.0665302880380341 0.0621446462992104 0.069058397833771 0.0654658857162348 0.0621446462992104 0.0621446462992104 0.0643899513877556 0.0656678033838102 0.0631059657082909 0.0621446462992104 0.0636242898047096 0.0673046275306894 0.0650325075059534 5 5|0 +|/ 8589975 8590923 8590534.5 8589237 8591239 + gene protein_coding_gene TRUE TRUE AT5G24930.1 zinc finger (B-box type) family protein Identical to Zinc finger protein CONSTANS-LIKE 4 (COL4) [Arabidopsis Thaliana] (GB:Q940T9); similar to COL3 (CONSTANS-LIKE 3), protein binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G24790.1); similar to Zinc finger protein CONSTANS-LIKE 4 (GB:Q940T9); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) -0.253689966906244 -2.74925664846448 0.0195397852436545 1 2.88260486832825 24.7729950477913 -0.253689966906244 0.0766284852077525 AT5G46840_at 5.94185136648036 6.2522571026064 6.53000796502631 6.61105875247264 7.18074929100462 7.26470621972507 4.95941202417418 5.27012173202437 6.37486276701913 5.76699177905536 6.59943997116253 6.64265060924686 6.6847601419101 6.59281076408838 6.65394087264885 6.48837094843995 6.29622291717763 6.35825315097697 6.61220074898328 0.209869224222750 0.202650334851402 0.219586077164459 0.215906105451337 0.205360880060951 0.221039628829241 0.201533736718548 0.209758281711674 0.205284630748254 0.205494649167758 0.203417174266167 0.199371959076291 0.200721177625393 0.207347135616314 0.204824497011535 0.205485574175546 0.205549123859555 0.209577842218496 0.202957744155095 5 5 + 19024185 19024783 19024502 19022828 19024994 + gene protein_coding_gene TRUE TRUE AT5G46840.1|AT5G46840.2 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G09880.1); similar to RNA-binding re (GB:ABE85138.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G55340.1); similar to Os03g0854300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051937.1); similar to RNA-binding re (GB:ABE85138.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.255426391335968 -2.74906167754822 0.0195464872498351 1 2.88230191456665 12.6467245251771 -0.255426391335968 0.0786419191417552 AT5G17530_at 7.57218595787369 7.60030267237726 8.21707656678543 8.25947404218151 8.78214374759667 8.38136763740312 8.23391758594237 7.78617006526617 7.79801231546852 7.83369313282312 8.27344755841106 8.40472200594991 8.28616580079835 8.55245980154368 8.14980889084804 8.3314295018605 8.28306574929506 8.62237562992972 7.542428964049 0.134839447855365 0.133966360171019 0.13291590077458 0.135210910083250 0.134400422002378 0.135974383634847 0.139171708123492 0.134347421421899 0.156648024542789 0.132029461020171 0.137941180594435 0.134152287477736 0.137952247970290 0.139607754879630 0.142075842705557 0.133790739697051 0.14531361562542 0.144228763661355 0.134495872289646 5 0|5 /|+ 5781090 5781815 5781411.429 5777605 5782152 + gene protein_coding_gene TRUE TRUE AT5G17530.1|AT5G17530.2 phosphoglucosamine mutase family protein similar to phosphoglucomutase, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70820.1); similar to Os07g0447800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059541.1); similar to Phosphoglucomutase/phosphomannomutase C terminal:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II:Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III [Crocosphaera watsonii WH 8501] (GB:ZP_00515726.1); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; (InterPro:IPR005845); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; (InterPro:IPR005846); contains InterPro domain Phosphoglucomutase/phosphomannomutase; (InterPro:IPR005841) -0.280197516779113 -2.74591231603601 0.0196550629510691 1 2.87740852109896 16.1479027034832 -0.280197516779113 0.104363215724127 AT5G66710_at 1.82334589654121 2.00060134627265 2.52942288763381 2.01213059425460 1.41288262174117 2.00544002112167 2.04696765331568 2.19772398539158 2.36004432467105 2.27296986183618 2.21985659721689 2.0665092475264 2.02429182236298 1.76799689635638 1.86885566607947 1.73832659268984 1.67216967036048 2.26907762361287 2.03028706380793 0.237619461012274 0.229345440059590 0.237445199244253 0.239472642044340 0.240535250200636 0.234033150447278 0.23486560009837 0.233179093043538 0.228591925349924 0.239569379756493 0.231022190755759 0.228591925349924 0.237833433344152 0.230336637950435 0.234023146565412 0.229697778921027 0.245202488598383 0.234806782903015 0.231911914140535 5 5|0 +|/ 26655097 26655748 26655526.8 26653835 26656020 + gene protein_coding_gene TRUE TRUE AT5G66710.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G50720.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06444.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.323831886236482 -2.74543789412061 0.0196714709383739 1 2.87667141207410 4.09080734143274 -0.323831886236482 0.141953625206985 AT5G20140_at 7.74548015049453 7.66904869557525 8.36713540372034 8.40732386822312 8.46075603279845 8.15479699121241 8.67100764701355 8.40646717522045 7.95186825886585 8.33977603749937 9.25993842989926 9.17688186341222 9.19686682411694 8.70810040506388 9.14827534587202 9.21051522175211 8.91961590081544 8.98763375899073 7.98392745860155 0.193398090585078 0.184189571632389 0.176238494791637 0.163306318476948 0.169878192684771 0.179066421364849 0.165500058616259 0.171231431783181 0.186633874011478 0.166834181720221 0.178910014974105 0.170927991965272 0.172692530155592 0.187726062323790 0.171259169032369 0.172187582501908 0.178086564254756 0.171150115669471 0.176122848577593 5 5|0 -|/ 6799315 6799878 6799656 6798834 6800905 - gene protein_coding_gene TRUE TRUE AT5G20140.1 SOUL heme-binding family protein similar to SOUL heme-binding family protein [Arabidopsis thaliana] (TAIR:AT3G10130.1); similar to SOUL heme-binding protein-like [Oryza sativa (ISS) [Ostreococcus tauri] (GB:CAL53297.1); similar to Os06g0597900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057992.1); contains InterPro domain SOUL heme-binding protein; (InterPro:IPR006917) -0.249063859591249 -2.74517487417069 0.0196805734293933 1 2.87626276213028 16.8191698557302 -0.249063859591249 0.0715721696112107 AT5G61780_at 8.34784338567512 8.49225146697538 8.40002218334162 8.36536928656122 8.94232445959605 8.31126581626676 7.77320582097928 8.06549006203047 7.07837838726329 7.5557168369491 9.32318369668785 9.76752672922866 9.14348152292331 9.4173969605535 9.48916181589347 9.28988478205506 8.83451525373158 8.73002903206271 7.09080909043579 0.166821349748991 0.162525822698786 0.168589111437536 0.166409723691807 0.162405432031985 0.172923091590127 0.165706440162737 0.166006829862915 0.191288547579444 0.171194293242565 0.167151308285770 0.160443751565622 0.160470291796529 0.160443751565622 0.164670255574228 0.160443751565622 0.185824751690821 0.168683893056429 0.193208069779075 5 5 + 24843081 24843840 24843477.818 24838484 24844195 + gene protein_coding_gene TRUE TRUE AT5G61780.1 tudor domain-containing protein / nuclease family protein similar to tudor domain-containing protein / nuclease family protein [Arabidopsis thaliana] (TAIR:AT5G07350.1); similar to Tudor; Staphylococcus nuclease subtype [Medicago truncatula] (GB:ABE80217.1); similar to TUDOR protein with multiple SNc domains [Picea abies] (GB:CAL38976.1); similar to 110 kDa 4SNc-Tudor domain protein [Pisum sativum] (GB:BAC06184.1); contains InterPro domain Maternal tudor protein; (InterPro:IPR008191); contains InterPro domain Staphylococcus nuclease subtype; (InterPro:IPR006022); contains InterPro domain Tudor; (InterPro:IPR002999); contains InterPro domain Staphylococcus nuclease (SNase-like); (InterPro:IPR006021) 0.300784552024619 2.74342905955705 0.0197410984997685 1 2.87355038991332 16.5827376830239 0.300784552024619 0.123066033574703 AT5G46450_at 6.76402711209657 7.0123537853726 7.71142175471193 7.39975952496832 8.34318729623668 7.52050353465948 6.95709993885 6.1833266941161 6.56166874808191 6.0771058569133 6.68327017671508 6.11511132570092 6.88234303831022 6.90605070868865 5.39541808693011 7.22395552231104 6.32262523582083 6.00773248744525 5.95159384789375 0.2050157640988 0.196108496549261 0.212287006194599 0.200981714371415 0.196108496549261 0.209097289492906 0.203377821211324 0.209263043248615 0.206266107132978 0.196108496549261 0.200123715631102 0.200409604436387 0.197827201597209 0.205898129436918 0.196108496549261 0.196108496549261 0.216259899524977 0.215373128542864 0.198045789606984 5 5 + 18856212 18856711 18856426.364 18852845 18856773 + gene protein_coding_gene TRUE TRUE AT5G46450.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46470.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.411792027326324 -2.74321624745163 0.0197484890984267 1 2.8732197645708 13.5558863586447 -0.411792027326324 0.207256574780653 AT5G49220_at 3.94069372022394 3.78371927585218 5.01960514007511 4.81250984739553 5.52694928818644 4.76680651453937 4.71711628523122 4.2752714620476 3.06032026005518 4.16894860800994 5.09953169332355 6.00351705556255 5.16740851587469 4.68940672219601 5.10165736992176 5.10121308757363 4.90081910882186 4.97238379212063 3.58312459382988 0.271130299738758 0.272078581085943 0.282745331626581 0.27130426498862 0.270725310573345 0.281970478708586 0.27128004663541 0.282951913870010 0.295805353911486 0.268240678651646 0.277775266223688 0.27120795337294 0.274779801212278 0.276790580052613 0.277108495051057 0.273042619262275 0.276601286410113 0.270104276591247 0.268240678651646 5 5|0 +|/ 19975079 19975649 19975363 19973663 19976059 + gene protein_coding_gene TRUE TRUE AT5G49220.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01260.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO39871.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46235.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) 0.344850644718772 2.74247865616192 0.0197741257441562 1 2.87207385577808 8.9721456027636 0.344850644718772 0.158661336675611 AT5G51770_at 4.40140935638641 4.41909641605149 5.74140320895373 6.06196507517722 4.52956778821054 4.64200180611709 4.00453763047483 3.89105929970384 4.07250384624075 3.84916397970721 4.18257926344766 4.06625507201352 4.43615949415351 4.68276661066943 3.83458135643286 4.51395739557988 4.14806266910589 3.80381130023708 4.34588169369866 0.245160031783036 0.240264177603754 0.245052378031295 0.255198123216338 0.239601296855775 0.250734103007882 0.252280618565870 0.239601296855775 0.253146843560966 0.250813369935878 0.24213547352475 0.239601296855775 0.239601296855775 0.245286432781183 0.249396771606642 0.239921166961327 0.253312170104717 0.252222542511556 0.253726851876635 5 5 + 21049755 21050149 21049943.909 21048256 21050220 + gene protein_coding_gene TRUE TRUE AT5G51770.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25390.1); similar to Os03g0251700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049573.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94994.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.241409253715602 -2.74207348983791 0.0197882223358856 1 2.87144440621592 8.86023248184465 -0.241409253715602 0.0620568045405036 AT5G64400_at 11.8607585990783 11.9725758924704 12.7037997997497 12.7544250914959 12.2577330779568 12.1887634864429 11.5569428221101 11.9138369203195 11.6421207001324 11.654748275427 12.4739107632183 12.4051643071526 12.5570402843728 12.5978745271852 12.3297208354603 12.5610726005531 12.2768578029363 12.2992406113962 11.5277037066388 0.06171698878993 0.0606901952462118 0.0606901952462118 0.0619902260782822 0.0628483429101402 0.0638154203937271 0.0620816764161574 0.0606901952462118 0.0703756781426421 0.0610719180602051 0.0607262503721321 0.0606901952462118 0.0606901952462118 0.0656678691227623 0.0621100736827088 0.0613833762668474 0.0692587945177118 0.0625135095550966 0.0633084855379712 5 0|5 /|+ 25766689 25767381 25766935.75 25766066 25767615 + gene protein_coding_gene TRUE TRUE AT5G64400.1|AT5G64400.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09570.1); similar to Os03g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050926.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1); contains InterPro domain CHCH; (InterPro:IPR010625)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09570.1); similar to unknown [Hyacinthus orientalis] (GB:AAS21010.1) 0.244597200694596 2.74128570976088 0.0198156595670239 1 2.87022056354982 24.1740050165032 0.244597200694596 0.0663944305225807 AT5G42840_at 1.71431740143589 1.92234956519808 1.88978857596442 2.31633003059229 1.24173830182321 1.76662466340987 1.8475333376634 1.68635230243188 1.78065760361744 1.8077511900631 1.52527251876074 1.44406085953302 1.59645807929344 1.43576203502844 1.51341476122962 1.57453908609143 1.51598177520358 1.74862282681852 2.09220115277055 0.186891214204133 0.184215399100158 0.192240063817335 0.187382955930490 0.187048043492031 0.183694619816542 0.191451350645114 0.182927771584328 0.187473511442155 0.186433352188417 0.185747139308646 0.185705951977732 0.189318801567750 0.187822109345789 0.193191949765214 0.186137615327045 0.206789120431551 0.186409686673768 0.18920953775183 5 5 + 17197816 17198361 17198146.636 17196386 17198401 + gene protein_coding_gene TRUE TRUE AT5G42840.1 DC1 domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27500.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27473.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G28650.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) -0.303462138162442 -2.74090287068068 0.0198290069919971 1 2.86962581968398 3.51702959309582 -0.303462138162442 0.125592866353539 AT5G09250_at 4.81103801376111 4.9537114709451 5.1213830870537 4.93706563617903 5.43052215507824 5.51150328191657 4.2219070931602 4.82216575300714 5.52565030783167 4.98903879530707 6.20791857971163 6.26115844847411 5.60792658605844 6.69220337717484 5.8023984593269 5.99243003110468 5.08263963610729 5.47501768423397 4.79112618738796 0.212790024671086 0.213401820291000 0.227666491561134 0.220238777239451 0.218257992360749 0.213899850131772 0.212790024671086 0.216176338652483 0.223361995611432 0.212790024671086 0.212790024671086 0.213481406100596 0.212790024671086 0.217882633166269 0.218705979352952 0.213809673718094 0.243822488101004 0.212790024671086 0.214430771628009 5 5|0 -|/ 2875444 2876300 2876003.444 2875233 2876576 - gene protein_coding_gene TRUE TRUE AT5G09250.1 KIWI; DNA binding / transcription coactivator putative transcriptional co-activator (KIWI) mRNA, complete Identical to RNA polymerase II transcriptional coactivator KIWI (KIWI) [Arabidopsis Thaliana] (GB:O65154); similar to transcriptional coactivator p15 (PC4) family protein [Arabidopsis thaliana] (TAIR:AT5G09240.1); similar to Os02g0553600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047113.1); similar to p31A, putative [Aedes aegypti] (GB:EAT39474.1); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173) -0.288287733916566 -2.74080332633264 0.0198324790069619 1 2.86947117768041 10.4722370766124 -0.288287733916566 0.112311948809520 AT5G66970_at 1.64326873520830 2.08711677553869 2.26870817574929 1.91841911117371 1.29482955887530 1.45278070823618 1.39810411286758 1.59192256862026 2.02747201446608 1.83605155727866 1.46415814806391 1.45172784397234 1.37654992913116 1.78900535685578 1.53767671208075 1.09907266993827 1.92712831559331 2.07643968671415 1.97412812203521 0.214430521223174 0.216705759052085 0.214430521223174 0.218808174205010 0.214430521223174 0.215936201829014 0.214430521223174 0.223621102285961 0.218031165855418 0.217927709870187 0.214430521223174 0.218866419285737 0.231191956060689 0.217141883951179 0.217811118733103 0.214687540768604 0.225236745353569 0.229775062103856 0.214430521223174 5 5 - 26757671 26758311 26757968.1 26757671 26758351 - gene protein_coding_gene TRUE TRUE AT5G66970.1 GTP binding similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.2); similar to Signal recognition particle 54 kDa protein 2 (SRP54) (GB:P49966); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897) -0.282479249675534 -2.74080000122948 0.0198325949939555 1 2.86946601214461 3.47494558364384 -0.282479249675534 0.106988891763900 AT5G12450_at 2.21567786802804 2.19871968433887 2.8751046328079 2.4416605449462 2.09294513686169 2.12305093855403 2.04426066170242 2.41251678817833 2.64305554439788 2.89889498161349 2.37072182822507 2.69590215187811 2.63960336274207 2.56090330213899 2.49523027818629 2.43585681136045 2.55306435764408 2.68025420954335 2.63092895790658 0.175899500278211 0.175213895823938 0.177819224989862 0.189731498966507 0.175575751947216 0.180267745662228 0.175368089457659 0.177516220068878 0.183269838676391 0.179923164995686 0.175960860127173 0.181961416568766 0.176892876896144 0.181431358350544 0.184876751562288 0.178694301438061 0.175073339408099 0.191450447342202 0.179637687921493 5 5 + 4040940 4041095 4041030.091 4040940 4041131 + gene protein_coding_gene TRUE TRUE AT5G12450.1 similar to syntaxin-related family protein [Arabidopsis thaliana] (TAIR:AT1G48390.1); contains InterPro domain FBD-like; (InterPro:IPR006566) -0.273610577710402 -2.74009769744689 0.0198571080810460 1 2.86837499622587 4.93960963143758 -0.273610577710402 0.0986078004344944 AT5G63580_at 2.22715100350904 2.01714331305073 2.31660172437297 2.53270344977727 2.03496603122589 2.76354692653621 3.0646702985558 3.27596806569565 2.19743750990983 2.43931368894446 4.27067564810671 3.9072032612161 3.05945462761752 5.13329453811035 3.72796974936284 4.73310158160986 4.4279650406774 4.20750533559946 2.81374499579696 0.224319505343562 0.224139554852675 0.217137167772181 0.219687782518224 0.218192323399061 0.222816539267842 0.218640913270701 0.217157914170843 0.228108517269142 0.217137167772181 0.226748009016994 0.220277711812014 0.218644278425604 0.226225134139836 0.221050087013020 0.22941866888907 0.226982125947228 0.224371485483334 0.222053015833792 5 5 + 25472140 25473154 25472685.273 25471956 25473702 + gene protein_coding_gene TRUE TRUE AT5G63580.1 flavonol synthase, putative encodes a protein whose sequence is similar to flavonol synthase similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (GB:O04395); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.322046454858725 2.7376429865107 0.0199430245121204 1 2.86456181325553 5.86254132875942 0.322046454858725 0.141257564432534 AT5G38380_at 4.43217562507285 4.95902157748163 5.68066981283391 5.76507546354355 6.75560058167771 5.39858498224101 4.68904059203939 3.98086138788716 3.58194918340475 3.91779898527528 5.94140235887322 5.90348067092705 5.77299672153373 5.43594099649493 5.36245629720914 5.70995001151086 4.91899626228505 5.58213939723598 4.69967298583022 0.271763033262728 0.273962589113503 0.279689830523089 0.274009808750098 0.285780983729531 0.287486668310583 0.283316629205672 0.281123546506872 0.298303105832087 0.281472358332382 0.280781209926174 0.27376834962518 0.297064537288048 0.286500007284534 0.282922403664550 0.272853220988413 0.300824859505841 0.291948465113554 0.274565635915474 5 5 + 15364671 15365539 15365159.1 15362674 15365657 + gene protein_coding_gene TRUE TRUE AT5G38380.1|AT5G38380.2 similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT2G04620.1); similar to PREDICTED: similar to Solute carrier family 30 (zinc transporter), member 5 [Strongylocentrotus purpuratus] (GB:XP_784123.2); similar to Os07g0283200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059381.1)|similar to Os07g0283200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059381.1) 0.518807445502129 2.73266199339745 0.02011850335758 1 2.85682506884836 10.0300757816866 0.518807445502129 0.280524764383826 AT5G15540_at 6.2414503659597 6.3753009760628 7.14064711781833 7.18615350589474 7.39566368580344 7.10709440551976 5.72560736414877 6.02108290950448 5.93821425317343 5.73565490202847 5.93357360424892 6.21137358931993 6.45105272581207 6.31971414761631 5.85860095641772 6.49454322601518 6.56164765389286 6.62546146631603 5.82885894034469 0.194535348994408 0.183585619223131 0.193687245795032 0.192152292814655 0.190001487405830 0.197248803332633 0.191125522219458 0.183835169669208 0.194330978197232 0.199367880774185 0.191558913894178 0.181354582824091 0.188194828392577 0.181354582824091 0.182939578961267 0.189444008568643 0.189408583031568 0.181354582824091 0.181354582824091 5 5|0 -|/ 5048039 5048744 5048413.111 5047676 5057414 - gene protein_coding_gene TRUE TRUE AT5G15540.1 binding similar to hypothetical protein MtrDRAFT_AC149305g25v2 [Medicago truncatula] (GB:ABE89482.1); similar to PHD-finger, putative [Medicago truncatula] (GB:ABE89485.1); similar to putative IDN3 protein isoform A [Oryza sativa (japonica cultivar-group)] (GB:BAD30168.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.250838957757473 -2.7283661770743 0.0202710794227242 1 2.85015345959326 12.7197443511992 -0.250838957757473 0.0755448217014213 AT5G67130_at 6.49791118025158 6.32487455349034 6.27128801450887 6.36159744015127 7.63436867348983 7.15444535468484 6.10610304130851 6.02157432778266 5.71668244271843 6.05023799551222 7.17211177553917 7.54320919318891 7.15620811881049 6.91644270912406 7.12970269636897 7.03982709360989 6.89830823713205 6.58867853733036 6.56572135857826 0.232144483896618 0.225798443191634 0.241098918854913 0.234490846197148 0.242018561958283 0.238454208951071 0.231937925382820 0.229390714595046 0.248231977424421 0.242361760524316 0.229551465528432 0.225798443191634 0.236208392043065 0.233628966079698 0.243558293839543 0.227514355468829 0.234731059616082 0.237398645737365 0.237562271480901 5 5|0 +|/ 26810200 26810820 26810530.5 26808572 26811108 + gene protein_coding_gene TRUE TRUE AT5G67130.1 phospholipase C Identical to PI-PLC X-domain containing protein At5g67130 precursor [Arabidopsis Thaliana] (GB:Q93XX5;GB:Q8LAF6;GB:Q9FHA0); similar to phospholipase C [Arabidopsis thaliana] (TAIR:AT4G36945.1); similar to Os09g0115600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062585.1); similar to MAP3K-like protein kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96605.1); similar to Os03g0415200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050364.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909) -0.264721839183649 -2.72824051829278 0.0202755598116001 1 2.84995831798285 13.1297411452456 -0.264721839183649 0.0908444621703379 AT5G58010_at 3.31713254441545 3.30802008665744 3.48983071055734 3.26896636813376 2.71643283057682 3.34102678852593 2.51649670834208 3.18386019670296 2.96792839124947 3.08984106399779 3.46759807480177 3.30281945376287 3.28993982938626 3.54970401614584 3.51250684433605 3.19153647976530 3.42470687925643 3.15994920846374 3.49498036928161 0.209942138342953 0.217122136339591 0.226916018831508 0.220587255109783 0.213380540842276 0.218580122116304 0.216223384982319 0.212764102117853 0.224434800886818 0.219370015294568 0.210124945744958 0.214243549068993 0.219216014605775 0.209942138342953 0.210817273551403 0.210020171247949 0.215944013926463 0.221119379068665 0.218017203336909 5 5|0 -|/ 23500899 23501704 23501168.444 23500771 23502115 - gene protein_coding_gene TRUE TRUE AT5G58010.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G24260.1); similar to bHLH transcription factor PTF1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD72512.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.348189284018258 -2.72662049838085 0.0203334104066609 1 2.84744257500916 6.41601829911368 -0.348189284018258 0.162740934561426 AT5G64220_at 7.12627853974155 7.25101612238862 8.02154533668867 8.31204882499962 8.25576905783604 8.08128845145051 7.16085561407382 7.07073672622711 5.62644522012775 6.70311305503291 7.68394753814465 7.81763370238308 7.80783797359893 7.76628671469135 7.63068047243692 7.94454442059908 7.71240983796327 7.28947705510526 6.3560056585245 0.177336152051267 0.169427524253645 0.169427524253645 0.172159531234146 0.174211053002870 0.170436908966196 0.171151401941619 0.177948699840163 0.202585736104058 0.178625622569742 0.174495612205744 0.169427524253645 0.174184878522631 0.169427524253645 0.176019498005564 0.169427524253645 0.174921928032696 0.182602214951618 0.17952163856072 5 5 + 25708393 25709082 25708689.4 25703434 25709476 + gene protein_coding_gene TRUE TRUE AT5G64220.1|AT5G64220.2 calmodulin-binding protein|calmodulin binding Identical to Calmodulin-binding transcription activator 2 (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) (CMTA2) [Arabidopsis Thaliana] (GB:Q6NPP4;GB:Q9FMG3); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.1); similar to EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN), calmodulin binding / transcription regulator [Arabidopsis thaliana] (TAIR:AT5G09410.1); similar to anther ethylene-upregulated protein ER1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94398.1); similar to calmodulin-binding transcription activator [Brassica napus] (GB:AAM10969.1); similar to Putative calmodulin-binding protein similar to ER66 [Oryza sativa] (GB:AAM08530.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.241698929751641 2.72567713683492 0.0203671734206026 1 2.84597767606213 14.6275040969726 0.241698929751641 0.0644071790076099 AT5G49770_at 2.67434552163488 2.35430760301104 2.66437354935807 2.91543225684308 2.27117855207983 2.6891479132161 2.71311033033759 2.42289127801570 2.85252726674222 2.56115044966480 2.84464443991148 2.60789591072164 3.01220572531523 2.56529633522298 2.61657333233157 2.52051733151665 2.93280395777287 2.81294869257801 2.85883002022585 0.154910226082803 0.161180410823571 0.158176803262350 0.156226946546819 0.154910226082803 0.158712175656807 0.159328814601114 0.156252573396899 0.163927725496385 0.159576966529471 0.161606601413455 0.154910226082803 0.159791947053167 0.157958237383975 0.158217097300477 0.158698240890204 0.169388847108306 0.159668490799663 0.155865668830681 5 5|0 +|/ 20243923 20244457 20244329.1 20239895 20244493 + gene protein_coding_gene TRUE TRUE AT5G49770.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79620.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93732.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to putative receptor-like protein kinase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD82283.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.287144829176315 -2.72550210352282 0.0203734440242855 1 2.84570588009488 5.3364050228365 -0.287144829176315 0.112735547797832 AT5G12350_at 5.95586726802937 6.00937086151275 6.50182473983857 6.62655648584918 6.95723701281947 6.85887076035085 5.1493224608649 4.86356778467861 4.79124142394582 5.00552359552776 6.15071007087536 6.60983095734715 5.91989837088299 6.1765030390081 6.32195203220052 6.32188791398033 6.10801615527313 6.25855826927494 5.10272679615139 0.246149087850753 0.236459840318023 0.241717036376918 0.24457404807525 0.240611370889490 0.248564493157993 0.236574048792904 0.236529201918541 0.242472059394851 0.243250762382390 0.243241246324542 0.235444126244795 0.238196739881246 0.241083173688460 0.237355611839529 0.237797247935142 0.242027904740628 0.243090964934575 0.245196529646233 5 5 + 3999785 4000520 4000171.545 3995343 4000802 + gene protein_coding_gene TRUE TRUE AT5G12350.1 Ran GTPase binding / chromatin binding / zinc ion binding similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G42140.1); similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G19420.1); similar to Pleckstrin-like; Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89832.1); similar to unknown prtein [Oryza sativa (japonica cultivar-group)] (GB:AAT77332.1); similar to putative ZR1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87854.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 0.236586078787321 2.72504448274476 0.0203898474728755 1 2.84499528214832 11.7152856082331 0.236586078787321 0.0573310793677228 AT5G50340_at 5.22491555093534 5.31248721709144 6.20475946751378 6.68731539783053 6.69050409224883 5.84518667822153 5.31137595136969 5.29987442736125 4.60568159390359 4.45331809275871 6.15203966421109 6.17106921936088 5.75834650386597 6.15343830070491 6.03698588430403 6.29646206995457 5.92733763184462 5.82589714717425 4.21517516347722 0.206217487607747 0.200036145863014 0.211228972581366 0.203992810081085 0.208515668232365 0.214530189213098 0.200036145863014 0.207380333262765 0.212812139725426 0.201811920082644 0.200036145863014 0.200036145863014 0.200036145863014 0.212287232586811 0.201009294854386 0.203310144339585 0.227935010414513 0.200285354403276 0.214185340149912 5 5|0 -|/ 20509097 20510141 20509441.5 20508643 20513153 - gene protein_coding_gene TRUE TRUE AT5G50340.1 ATP binding / ATP-dependent peptidase/ damaged DNA binding / nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56731.1); similar to Os06g0151600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056828.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain DNA repair protein RadA; (InterPro:IPR004504); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984) 0.356335312785026 2.72419959641959 0.0204201670699757 1 2.84368336000869 11.0545133491836 0.356335312785026 0.169135844674633 AT5G42960_at 5.18003512456372 5.89958911909797 6.48018182066835 6.40002079875094 6.56801817477737 6.57949088089803 5.96823581873512 6.07598530343551 5.31142454887054 5.36916946572196 5.75936839536387 5.74542402003635 6.20137816444704 6.04109117054889 5.42591151743857 6.17734735737237 5.89740521888726 5.95073115448689 4.91410430693226 0.185680479096761 0.182319882151576 0.188489869750327 0.181123317074204 0.193839347002702 0.190753865420829 0.190192638530135 0.191682486329932 0.182294772914413 0.198288867172680 0.182585948095895 0.186124334939876 0.192090022002517 0.180121102143978 0.195345828382561 0.182424427902333 0.193677632700153 0.190585770451227 0.206590331787783 5 5 + 17252462 17253628 17252819.091 17252320 17253907 + gene protein_coding_gene TRUE TRUE AT5G42960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45170.1); similar to pore protein of 24 kD (OEP24) [Pisum sativum] (GB:CAA04468.1) -0.302888325527390 -2.72413924702736 0.0204223344870899 1 2.84358965197924 11.692977079448 -0.302888325527390 0.126687989450066 AT5G55040_at 1.64248210708316 1.73870931734191 2.60585600975392 2.57459713793344 2.65638497235357 1.81708216195172 1.59189493385197 1.72996930191747 1.81310101323796 1.08500142209571 1.34227978061727 1.60339909064785 1.86126223832391 1.98110372022698 1.98829057592004 1.74611991345683 2.04616174316407 1.84718903110023 1.85309100528965 0.231311483819512 0.233363573464863 0.24038842923648 0.227628227620609 0.236908363282858 0.231005730799933 0.233112780469431 0.226977574468904 0.235636621440732 0.234373365192883 0.230784943102881 0.226977574468904 0.228786147820895 0.234897583852067 0.232482075718768 0.226977574468904 0.238095630157333 0.234716485104043 0.240626823771099 5 5|0 -|/ 22347162 22347960 22347712.2 22347146 22347986 - gene protein_coding_gene TRUE TRUE AT5G55040.1 DNA-binding bromodomain-containing protein similar to DNA-binding bromodomain-containing protein [Arabidopsis thaliana] (TAIR:AT1G20670.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM22713.1); similar to Os03g0130800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048857.1); similar to Os09g0550000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063862.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.328653745579357 2.71977469292128 0.0205796944578661 1 2.83681300618224 3.73747544705169 0.328653745579357 0.148235288713394 AT5G57250_at 3.56310052017928 3.0247769381868 3.97399197023306 3.95080217519452 4.58362155701696 3.60792863258364 3.67387519317102 3.55295359722336 2.94045977528102 2.72174204204327 4.26785420718883 4.4257381600405 4.42022134085854 4.18236473383943 4.34188630282109 4.70396482175078 4.31760184638034 4.43688087245138 2.94421350178904 0.245661802490332 0.242261122272216 0.241133795269197 0.237930301436634 0.244479990575381 0.242824224708437 0.237930301436634 0.242332626203974 0.245495005080727 0.24368503865368 0.238565912833254 0.242338499932059 0.241363519040073 0.243706950770319 0.239325344752531 0.237930301436634 0.252804500820306 0.246826266672657 0.240796182859701 5 5 - 23212843 23213347 23213057.909 23212835 23215750 - gene protein_coding_gene TRUE TRUE AT5G57250.1 similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABD28636.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.389631754550218 2.71962332813073 0.0205851733958317 1 2.83657800506683 7.36931589399231 0.389631754550218 0.194016488424951 AT5G35960_at 0.89951930006149 1.41670151151586 1.48573935237001 1.67568388484789 1.50539141853048 1.16564321385195 1.14815000742956 1.33888672927602 1.15330455295289 1.14124183652561 1.46776261309734 1.97204873500356 1.98946299251109 2.06776375270598 1.70173193929316 1.28784363151072 1.40468143062391 1.32374392671853 1.13850121873545 0.205629302846874 0.195137348548946 0.197743347217196 0.205123891828927 0.202863999934999 0.196579369024554 0.204247573710679 0.204604940495645 0.201118079817982 0.203258237459318 0.195137348548946 0.195862871671742 0.205641227038383 0.200536738807373 0.203178067929818 0.200024293058126 0.205211324063431 0.202675478717994 0.196253200132315 5 5 - 14125790 14126647 14126228.636 14125754 14127766 - gene protein_coding_gene TRUE TRUE AT5G35960.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18910.1); similar to putative receptor protein kinase PERK1 [Oryza sativa (japonica cultivar-group)] (GB:BAD45880.1); similar to Os06g0663900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058295.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.290774162643711 2.71734404853555 0.0206678521778975 1 2.83303944640757 2.72757896744592 0.290774162643711 0.116778654656515 AT5G47680_at 6.55796665800565 6.93742624652234 7.07521310904539 7.02659206321097 7.44386640498018 7.60286338036913 5.95510517857478 6.83746051691652 6.41942787014553 6.40256388745392 7.52810709976411 7.31586181053819 7.0585434219968 7.28057259101924 7.67835931126864 7.32709100523068 6.4279491979896 7.21828715843304 6.92095868092841 0.185891435477567 0.177438941769862 0.177809895173368 0.183772245064828 0.18644366634869 0.196318298751977 0.188297330130931 0.181085480089754 0.204012099048100 0.179854850378741 0.192255649460368 0.177893536092537 0.179640665431525 0.192585365223388 0.189929677322282 0.172795065930581 0.181160860385815 0.176694374538961 0.183761511303373 5 5|0 -|/ 19333567 19334213 19333916.7 19333360 19334748 - gene protein_coding_gene TRUE TRUE AT5G47680.1 RNA binding / tRNA methyltransferase similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to Protein of unknown function DUF425 [Medicago truncatula] (GB:ABD28597.1); contains InterPro domain tRNA (guanine-N1-)-methyltransferase; (InterPro:IPR002649); contains InterPro domain Protein of unknown function DUF425; (InterPro:IPR007356) -0.354707429889746 -2.7162859974849 0.0207063443438572 1 2.83139691777035 13.8347266592228 -0.354707429889746 0.168689206001549 AT5G44460_at 2.09109866433378 2.62047961168689 2.88908655949104 2.99578690111826 2.02886106515545 2.23828185335757 1.64807350563894 1.54329465864526 1.14927513267709 1.64991356491128 1.82143067966181 1.62557541372052 1.43155143376408 1.83060243604126 2.02598743908319 1.97555666638684 1.91090293711703 1.70301396311429 1.65037927581576 0.193779628796346 0.189369681780362 0.185228888311397 0.193685967146573 0.186482223470126 0.190395071062546 0.188951455993801 0.185228888311397 0.191944364034004 0.193179269575854 0.188296583092174 0.199629410443484 0.189838839352765 0.187362810448049 0.194753226479508 0.189167779930855 0.187237925095271 0.191231191181386 0.187083370133844 5 5 + 17934544 17935029 17934735.273 17934453 17935210 + gene protein_coding_gene TRUE TRUE AT5G44460.1 calcium-binding protein, putative similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT4G20780.1); similar to putative calmodulin-like protein [Populus x canadensis] (GB:CAG27612.1); similar to Calcium-binding protein CAST (GB:Q09011); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.274360463714082 2.71424350030697 0.0207808529842292 1 2.82822627936360 3.89375382521799 0.274360463714082 0.101862160128643 AT5G35770_at 2.51838674175653 2.44359642892504 2.70440608977370 2.53164118230945 2.09335455922355 2.51344910072339 2.3437673106345 2.44110884031601 2.561602383825 2.53730467654813 2.57882128191548 2.89142131585098 2.63457437758515 2.6360367664573 2.36798805666414 2.5881088573338 2.22237094238423 2.7706925234389 2.56886745476294 0.201680615788437 0.202293766776203 0.205005132860325 0.221140521212594 0.201884423236244 0.207054071720136 0.200392226667132 0.201612375317261 0.207698014286317 0.207230658674776 0.201193083257385 0.20672453282483 0.205305138849563 0.206059535707490 0.215673376872071 0.200381236483090 0.214194440531885 0.203638361260060 0.216000001949292 5 5 - 13953688 13954251 13954007.727 13953316 13958097 - gene protein_coding_gene TRUE TRUE AT5G35770.1 SAP (STERILE APETALA); transcription factor A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development. Identical to Transcriptional regulator STERILE APETALA (SAP) [Arabidopsis Thaliana] (GB:Q9FKH1;GB:Q9ZRQ7); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047) -0.254190135265994 -2.70943773971734 0.0209572180646421 1 2.82076694327100 5.01980208349899 -0.254190135265994 0.0814269733770859 AT5G55060_at 4.909019719029 5.21239066248935 6.06912038578123 5.54416855776938 6.08859492722471 5.95081999125146 4.32413133597341 4.80508153550152 6.19826670695386 5.42370896933405 6.25439472723348 6.35456767880579 6.00989071021943 6.62821760997887 5.78012983651992 6.43615984819297 5.98254033436864 6.38908787468095 6.20977158873626 0.222716875245938 0.217419775323168 0.214039543113132 0.21820960459068 0.222069911851089 0.21683195499908 0.215820199005983 0.217499588627354 0.231884739497406 0.214039543113132 0.214084866420274 0.215800094095346 0.221262325710803 0.218376818183039 0.22936141049899 0.216812371207716 0.218294586189216 0.220323545388673 0.220150340767739 5 5|0 +|/ 22362633 22363590 22363237.333 22359178 22363803 + gene protein_coding_gene TRUE TRUE AT5G55060.1 catalytic similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G58510.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF94658.1); similar to Os07g0511000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059759.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) -0.312315709245370 -2.70907582669134 0.0209705599821820 1 2.82020524099482 11.4495605556315 -0.312315709245370 0.136032786072689 AT5G12870_at 1.04738717897752 1.11180906157395 1.29491846948955 1.9015689946642 1.22581010465309 1.64521060276183 0.881187659945174 1.26770053331060 1.34226897036883 1.19944204233277 1.37294174386077 1.62242552032925 1.26843447657249 1.55171324212452 2.20501546821979 1.30469205260256 2.16878227551364 1.68366657467141 1.22896857633532 0.215698023905878 0.211464696730902 0.22305050072364 0.223765674620581 0.215675996944131 0.215868274512347 0.211464696730902 0.224778039844784 0.234473533964241 0.22110210357555 0.217006586744700 0.211464696730902 0.219089310558149 0.211464696730902 0.221108627482583 0.223215667830655 0.215537900929141 0.216014273098586 0.213805782899666 5 5 - 4062969 4063472 4063219.727 4062727 4064995 - gene protein_coding_gene TRUE TRUE AT5G12870.1 AtMYB46 (myb domain protein 46); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB83 (myb domain protein 83), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G08500.1); similar to Myb, DNA-binding [Medicago truncatula] (GB:ABE90877.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.322478750572910 2.70700404176788 0.0210470992183419 1 2.81698988225414 2.74900013346321 0.322478750572910 0.144525410504057 AT5G27330_at 3.0135488459287 2.78270138084214 2.88039169652626 3.18594592991813 3.08268399870466 2.88050218680873 3.00497678469778 3.00336843671472 3.59063645169930 3.07931278095859 3.53366986311379 3.91313341834190 3.03875902343902 3.44446100724733 3.9227234768619 3.51930513713603 3.70971245274183 3.90570600147309 2.89527973444827 0.176326160837863 0.188490540055777 0.187657553370249 0.187586971684147 0.176965629661583 0.177205956133150 0.176748795422974 0.179494816038307 0.186727930302783 0.175962996534389 0.180414876537807 0.185331832680432 0.184860341780709 0.175864166552743 0.194571664703967 0.175864166552743 0.196495921295033 0.177899114176749 0.177586004814636 5 5 - 9633180 9633564 9633320.091 9632706 9634983 - gene protein_coding_gene TRUE TRUE AT5G27330.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05130.1); similar to PREDICTED: similar to centromere protein E [Apis mellifera] (GB:XP_001120388.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) -0.24811009072124 -2.70417890909304 0.0211519181879559 1 2.81260569912774 6.38518663414085 -0.24811009072124 0.0749416640409212 AT5G50170_at 2.41423843763518 2.35004347525213 3.07752340649846 3.12158643325136 3.10765633584188 2.88940974077888 2.97326932595977 2.58816181537725 1.57168273778955 2.60378129298355 2.99671376653842 2.70462921705279 2.81582089167508 2.88691534672384 3.05376877534677 3.20941786884528 3.28611834082821 3.02192613695321 2.65805455346618 0.226023620812429 0.225107126294455 0.226494196901411 0.224560195160431 0.226574703573093 0.229576042416962 0.234417155225322 0.232019875596640 0.225396555841531 0.221659868763169 0.224872455022416 0.220683650891147 0.237782769428300 0.228792900107157 0.228993214216358 0.225416528477818 0.231925504148682 0.224131103003120 0.222598790817582 5 5|0 +|/ 20441946 20442726 20442239.2 20438299 20442812 + gene protein_coding_gene TRUE TRUE AT5G50170.1 C2 domain-containing protein / GRAM domain-containing protein similar to C2 domain-containing protein / GRAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G03370.1); similar to no pollen; Osnop [Oryza sativa (japonica cultivar-group)] (GB:AAU09489.1); similar to OSIGBa0106G07.15 [Oryza sativa (indica cultivar-group)] (GB:CAH67319.1); similar to OSJNBa0022H21.21 [Oryza sativa (japonica cultivar-group)] (GB:CAE05501.2); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973); contains InterPro domain GRAM; (InterPro:IPR004182) 0.250445051848883 2.70345302210544 0.0211789340762451 1 2.81147929747904 5.45261278186197 0.250445051848883 0.0777787663923996 AT5G49500_at 3.81361860040834 3.84519809197899 5.46660306713888 4.9197616413661 5.58629783987498 4.97289991392376 3.80084699403518 3.99931272407532 3.47734477330291 4.04675060899938 4.54017664700597 5.09191833918012 5.08661942051354 5.17771947819144 4.55704736020823 4.63243276687508 5.02848889194741 4.80346292460936 4.19560457775942 0.223530612488202 0.20860346578628 0.214473113776766 0.210972017922994 0.210850559734680 0.217608716011054 0.212129585736411 0.234548948630433 0.23245867191355 0.218567435518166 0.215937395781856 0.209650125660608 0.211746206004005 0.224701771069762 0.221094495635637 0.207999535427551 0.221225965016277 0.209823194100065 0.216595248899080 5 5|0 -|/ 20094784 20095529 20095077.2 20094782 20097432 - gene protein_coding_gene TRUE TRUE AT5G49500.1 signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B) similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.1); similar to ATHSRP54A (Arabidopsis thaliana signal recognition particle 54kDa A), 7S RNA binding / GTP binding / mRNA binding [Arabidopsis thaliana] (TAIR:AT1G15310.1); similar to Signal recognition particle 54 kDa protein 2 (SRP54) (GB:P49966); similar to GTP-binding signal recognition particle SRP54, G-domain [Medicago truncatula] (GB:ABE77897.1); similar to signal recognition particle 54 kDa subunit (GB:AAA66200.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897); contains InterPro domain Signal peptide binding (SRP54) M-domain; (InterPro:IPR004125); contains InterPro domain Signal recognition particle protein SRP54; (InterPro:IPR006325) 0.324293374293099 2.70267112779791 0.0212080728515517 1 2.81026601652556 8.93621730006034 0.324293374293099 0.146400407114758 AT5G37990_at 2.21496730250836 1.93967927922788 2.09258037225595 2.17495148507647 2.10191641323486 2.02019213899247 2.14959091465475 2.49673492906042 2.20101149109576 2.34295256927782 2.12301386823633 2.44071178725541 2.31342402653818 2.22810982271780 2.38318081152068 2.34027630985414 2.60326100541649 2.03720929408235 2.31073221550854 0.162007865215059 0.161944184561712 0.160746620428132 0.168768102509933 0.167884633548684 0.159618683965792 0.165374882239260 0.157385115590940 0.158345300435862 0.158802914683860 0.156425898686071 0.160216627807548 0.171392321707104 0.165749441230470 0.165247037963272 0.159314243729720 0.165243430260289 0.161931670319889 0.162598100477254 5 5|0 -|/ 15151175 15151717 15151475.3 15150967 15152730 - gene protein_coding_gene TRUE TRUE AT5G37990.1 S-adenosylmethionine-dependent methyltransferase similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G37970.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) -0.251614365240798 -2.70228852580072 0.0212223457761545 1 2.80967233697878 4.44560016654142 -0.251614365240798 0.0792575850218364 AT5G49390_at 2.30930951017566 2.21697603460535 2.57413342209429 1.96676985215704 2.51097978108608 2.31793953867349 2.97901333133537 3.07054729366976 2.62278912959704 3.16738925823165 3.71805816515093 3.73925864331445 3.66502236478328 3.81287978263133 3.71098376026406 3.40352756067639 3.27567753854776 3.30117756912308 3.34034784861921 0.202254652951720 0.206816483483920 0.195148367307072 0.207072166051140 0.194551082467359 0.215137789826295 0.195015625017969 0.201552393415148 0.202923679243045 0.198998689379757 0.201181511674424 0.213682963306513 0.202164520412063 0.205604765413831 0.196901537617892 0.195317198678098 0.204121224744207 0.194551082467359 0.197456216544257 5 5|0 +|/ 20046621 20047020 20046748.1 20045010 20047587 + gene protein_coding_gene TRUE TRUE AT5G49390.1 hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism similar to binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism [Arabidopsis thaliana] (TAIR:AT3G06670.1); similar to Protein of unknown function DUF625 [Medicago truncatula] (GB:ABD32317.1); contains InterPro domain ATPase, F1 complex, gamma subunit; (InterPro:IPR000131) -0.284296344737928 -2.70028520320132 0.0212972357115851 1 2.80656392703668 5.80412455474665 -0.284296344737928 0.112559917491490 AT5G26880_at 9.4662717852493 9.38052784085187 10.1954373461427 10.1314838777615 10.5354591074572 10.1664919271085 8.9252636675643 8.87573396456594 8.62606601139203 8.78250263218935 9.49047630841929 9.28916233164324 9.56862287595277 9.56958925418458 9.60236753937003 9.29582695090486 9.76241084658303 9.41670108128642 8.56175552063685 0.108277990551473 0.105671344259629 0.111243190774678 0.106851467225743 0.106184865847069 0.115508338452302 0.10609565915789 0.104763478764116 0.120846086491754 0.106212018084018 0.108200205297042 0.108302586045282 0.105349300181822 0.107415641940412 0.104763478764116 0.108391091272101 0.117065285797742 0.109743946859844 0.115243526099653 5 5|0 -|/ 9457998 9458924 9458295.75 9457700 9459233 - gene protein_coding_gene TRUE TRUE AT5G26880.1 tRNA/rRNA methyltransferase (SpoU) family protein similar to Os08g0506500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062189.1); similar to tRNA/rRNA methyltransferase (SpoU) family protein (ISS) [Ostreococcus tauri] (GB:CAL55185.1); contains InterPro domain tRNA/rRNA methyltransferase, SpoU; (InterPro:IPR001537) 0.241362580468055 2.69959643142843 0.0213230446767425 1 2.80549525869740 18.7876683745622 0.241362580468055 0.067030941246031 AT5G66640_at 7.14600521481263 6.94709235688794 7.50555057331866 7.53553561474634 7.29236002843262 7.24556001223655 2.76538447259566 3.17327452604907 5.23120710575989 3.51547772025688 3.28538692582971 3.08446649424394 3.14901221530782 3.72401426250141 2.42918508289648 3.59579873241683 2.86752065432125 3.85253719327072 4.11380100074639 0.253884272469398 0.241271949317334 0.246290077320598 0.245563716330654 0.240064998443343 0.254998186871728 0.244604796575552 0.246757795823098 0.265272516175960 0.239268718477248 0.249352424119044 0.243517724120179 0.24097912499739 0.239268718477248 0.245852854045856 0.242122513393942 0.239268718477248 0.24412987055371 0.247941024412079 5 5 + 26618223 26618961 26618629.455 26616855 26619175 + gene protein_coding_gene TRUE TRUE AT5G66640.1 LIM domain-containing protein-related similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G66620.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1) -0.251188012441986 -2.69898990946931 0.0213457974266570 1 2.80455422634608 9.96900475189472 -0.251188012441986 0.0791202374366902 AT5G56150_at 9.75377252958656 9.72229031287037 10.8001281437673 10.7790165397629 10.6208558342590 10.5132894926845 9.90451079362655 10.1183675079034 9.49106839597994 9.88703440041622 10.7084928178455 10.5050248202784 10.6104456647862 10.5664450143553 10.3125927403961 10.4693207353528 10.7080886513284 10.5253113271008 9.43649639969733 0.0823631863621096 0.0818172027690009 0.0843547719878227 0.084443676273227 0.0844398135057721 0.0839542640685065 0.0827972629556157 0.0814693124017138 0.0942313412633498 0.0831172825470144 0.0818475696933781 0.0818689207767204 0.0828021485942322 0.0877622027305024 0.084954466877457 0.0814693124017138 0.0863120411374528 0.0842855164760048 0.0863519667724517 5 5|0 +|/ 22747018 22748151 22747694.375 22746402 22748413 + gene protein_coding_gene TRUE TRUE AT5G56150.1|AT5G56150.2 UBC30; ubiquitin-protein ligase similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum] (GB:AAD51109.1); similar to Os04g0667800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054191.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.224957843451205 2.69646569646163 0.0214407491934142 1 2.80063806361415 20.3543197043717 0.224957843451205 0.0419428393754301 AT5G66000_at 3.45730122180723 3.81217668146033 4.1913650104618 4.40507866952565 4.66911374009438 4.67670133145932 4.10332137749376 4.00642674881231 4.20008842247075 4.02192388668672 4.50135610805847 4.18855450709254 4.53456743077058 4.12953119509197 4.57070228858131 4.1565224917022 4.94215029294266 4.66363288572104 3.83510157686139 0.216714880521559 0.217538522009743 0.22092145861313 0.223694988993887 0.221772770691557 0.228947172092811 0.221141681826569 0.231665429326314 0.230369544420168 0.219856689906186 0.215751473439037 0.218019805296744 0.219196157002420 0.215751473439037 0.221457454255269 0.215751473439037 0.227922367264678 0.220172119199600 0.229320976207493 5 5 - 26413910 26414366 26414136.818 26413693 26414726 - gene protein_coding_gene TRUE TRUE AT5G66000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35510.1); similar to Os06g0728500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058643.1) -0.246264324237686 -2.69583026801662 0.0214647178449945 1 2.79965228878367 8.40514315364004 -0.246264324237686 0.0736359817125094 AT5G13390_at 8.32140357871537 8.5400817722346 8.81647161729262 8.92270814336032 9.00104085292682 8.82531727560646 8.23145839071912 8.20684655181116 8.3092833212733 8.22903551431384 8.79040855224765 8.95799829133163 8.92040262653745 8.96467627360799 8.90213696903195 8.77403969768642 8.29207581623013 8.99875183496395 8.01458661323246 0.116010020990756 0.115641636011288 0.124477199995573 0.115337008116357 0.118300266221675 0.126814632966054 0.123176748333073 0.129929521120875 0.123550096321800 0.117915363514258 0.121695523031449 0.114309050612306 0.118152732765170 0.119477069031118 0.118930807196574 0.119249645072828 0.142986554611550 0.118734189416545 0.121565911132199 5 5 + 4296029 4296502 4296223.273 4292750 4296728 + gene protein_coding_gene TRUE TRUE AT5G13390.1 NEF1 (NO EXINE FORMATION 1) Required for normal pollen development and lipid accumulation within the tapetum similar to hypothetical protein MA4_111B14.46 [Musa acuminata] (GB:ABF72005.1) -0.23065202961976 -2.69577135440918 0.0214669414430218 1 2.79956089398856 17.1128475598222 -0.23065202961976 0.0520865417021831 AT5G03470_at 8.37454669194038 8.73196763452752 8.92604323450865 8.85462413719327 9.68686251823276 9.73995256997842 7.42992899687732 7.33779986649811 7.47311036087598 7.15711713830006 8.32279418348075 8.13081056986316 8.19899507895017 8.51991964727359 7.7733651168167 8.37551118553214 8.64292849457705 8.18122850815653 7.44867515651493 0.156839192252068 0.153333816522617 0.156786039023639 0.156837169160513 0.162187704457652 0.160293516309694 0.176863143809459 0.165650874862030 0.177891923767438 0.162394510141866 0.158014019895361 0.153333816522617 0.163776173500337 0.15690252872501 0.158310055926295 0.156047905667887 0.161521580137721 0.174946166668997 0.167160730951045 5 5 + 867702 868719 868124 866448 869023 + gene protein_coding_gene TRUE TRUE AT5G03470.1 ATB' ALPHA (PP2A, B' subunit, alpha isoform); protein phosphatase type 2A regulator Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa. Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform (PP2A, B' subunit, alpha isoform) (AtB' alpha) (B'ALPHA) [Arabidopsis Thaliana] (GB:O04375); similar to ATB' BETA (Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime beta), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT3G09880.1); similar to H0811E11.3 [Oryza sativa (indica cultivar-group)] (GB:CAC09487.2); similar to Os03g0681800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050908.1); contains InterPro domain Protein phosphatase 2A, regulatory B subunit, B56; (InterPro:IPR002554) 0.239878154690745 2.69422660236656 0.0215253274359911 1 2.79716453151069 16.449129864542 0.239878154690745 0.0657053595503895 AT5G18350_at 0.38474468165444 0.189548232378377 0.977410506166156 0.720551178667794 0.852657811104776 0.252265031509175 0.573363571033907 0.187150295688301 0.0471658476503821 0.539612501608008 0.657491450625913 0.780133252242272 0.846486539932019 0.264018820850286 0.783122536801909 0.741149105904286 0.621931999927939 0.94043339342205 0.47803717987636 0.22270645570939 0.227221177840002 0.222583952073338 0.224757580773124 0.225860791658223 0.233268332848649 0.224377611956583 0.222645682722331 0.238537925848961 0.229121228060373 0.224384613960926 0.222583952073338 0.222583952073338 0.222763000830489 0.229551103068638 0.224048854600248 0.237489964738003 0.234041810098641 0.230025880051529 5 5 - 6074574 6075178 6074986.727 6074525 6078571 - gene protein_coding_gene TRUE TRUE AT5G18350.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18370.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.309618194951095 2.69048617930855 0.0216673568857445 1 2.79136257879159 1.04685361211282 0.309618194951095 0.135570470464847 AT5G55790_at 2.76240988169653 4.73538371585035 4.57020496294299 5.25388865328692 5.40774255176957 5.15615097274022 2.45642566013269 4.22187202222752 4.33449554692828 4.09409450493851 6.71348777974797 6.3637754110191 6.22784253660786 6.81646081634213 6.5743532840016 6.50685259036125 5.3334331463736 4.9994705446021 4.54046375593683 0.307352203765994 0.282788389623906 0.290010257067944 0.294098645815749 0.282788389623906 0.282788389623906 0.311077754875899 0.296526181836874 0.308985139858201 0.291251690409853 0.296818322126228 0.291211425216068 0.295089764066513 0.310820454000951 0.293138295278646 0.293536324722398 0.291635681338404 0.291816865347659 0.286121755421698 5 5 - 22598021 22598487 22598165.25 22597896 22598561 - gene protein_coding_gene TRUE TRUE AT5G55790.1 unknown protein 0.814452253339752 2.69012835589268 0.0216809927243408 1 2.79080758170562 9.5779985273641 0.814452253339752 0.475196520930909 AT5G60290_at 1.66266687098448 1.57664693693011 2.37213347054715 2.25415941732531 2.71371687503344 2.12950669847014 2.07810112169096 1.73815735914659 1.58268335897564 2.26150186764508 1.94647885064218 1.62915692499242 2.63185807396753 2.26895884747104 1.74114084421912 1.97340981828319 2.18372229603439 1.87976284051448 1.32969257048407 0.207657305495357 0.206844795964193 0.210915590948760 0.212610171910466 0.203854556702297 0.222260104351903 0.207088761526252 0.205669907713584 0.206065231503862 0.214840134995395 0.203254306196051 0.204249906942266 0.203254306196051 0.207613199791882 0.217037622109055 0.218749594871853 0.207963884832084 0.209184282928682 0.204848026281255 5 5|0 +|/ 24280110 24281017 24280536.143 24280090 24281069 + gene protein_coding_gene TRUE TRUE AT5G60290.1 unknown protein 0.291068147478849 2.68992089133340 0.0216889026360704 1 2.79048579989841 3.94385459095792 0.291068147478849 0.119668344652789 AT5G08500_at 7.57166980198702 7.74798166359464 8.76208384775162 8.3632715030271 9.2504893792504 8.76990964133991 7.69971981024895 7.51578817701485 5.91841412172337 6.44110257956688 7.71982780055363 7.59948496259907 7.8105800044695 7.55530820295431 7.58638397643603 8.03188306515281 7.77605083259958 7.43085428442377 6.62954111423116 0.176120022892877 0.175833777714004 0.180501885366338 0.181074948600641 0.187380088982387 0.189027003273543 0.175833777714004 0.18192404479932 0.200768105334296 0.200811207233583 0.180425071348239 0.181216991409497 0.186274125340307 0.193905185096127 0.181048318192517 0.180658747954647 0.189137655561208 0.185285732894643 0.196593436049373 5 5|0 +|/ 2750653 2751303 2750980.5 2748194 2751772 + gene protein_coding_gene TRUE TRUE AT5G08500.1 transmembrane CLPTM1 family protein similar to transmembrane protein, putative [Arabidopsis thaliana] (TAIR:AT5G23575.1); similar to Os04g0441900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052878.1); similar to OSJNBa0064D20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE04225.2); similar to P0076O17.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE02511.1); contains InterPro domain Cleft lip and palate transmembrane 1; (InterPro:IPR008429) 0.287733363984745 2.68951334371234 0.0217044493852411 1 2.78985369208042 15.2193555178547 0.287733363984745 0.116722117298467 AT5G27940_at 3.20000498471101 3.57944998914266 3.76978271301389 3.52728611220821 2.74557214368186 3.34499928054161 2.99107589651601 3.65698038412713 2.81659336238789 3.31520544405712 4.01535855853063 3.39327691950641 3.44290666604844 3.60629443266074 3.9007467174491 3.18087885189994 3.52351130725054 3.66243078319695 3.44103009662747 0.226033306306519 0.22949098585435 0.229387942359784 0.224351774618155 0.231354808065205 0.227560720988274 0.231905098186086 0.240807658057448 0.225295721747154 0.229951547261583 0.226828928509396 0.218732219658951 0.218807676942281 0.228208440340822 0.220863214347862 0.226170247501843 0.229216122292543 0.219389460949973 0.219584725930056 5 5 + 9974507 9974864 9974664.182 9974415 9975075 + gene protein_coding_gene TRUE TRUE AT5G27940.1 WPP3 (WPP domain protein 3) similar to WPP2 (WPP domain protein 2) [Arabidopsis thaliana] (TAIR:AT1G47200.1); similar to MFP1 attachment factor 1 [Glycine max] (GB:AAF63659.1); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) -0.357550417755963 -2.68910186414473 0.021720157369564 1 2.78921549514799 6.74270318662213 -0.357550417755963 0.173532050848082 AT5G01370_at 1.41336491911603 2.43734582407285 2.47883594446499 2.17047532841073 1.89231687589293 2.08935513020928 2.31486439988932 2.10200932998241 2.53019315649172 2.70560862277222 4.33943819491147 5.64211152172003 3.13802631687812 4.11765153497174 4.91268822191349 4.24834228029424 3.11596429934385 4.36094716176566 3.20953576950829 0.230075475949310 0.242806982693031 0.228145026979171 0.232560291180073 0.234953176058535 0.226040218652638 0.23619769222922 0.238760461768692 0.237024536454477 0.226040218652638 0.238562495103632 0.247515260457597 0.230443424869375 0.234584796194709 0.242897810118536 0.237837608886217 0.228958467019388 0.227310696113195 0.227697461710794 5 5 + 153323 154249 153745.909 152529 154387 + gene protein_coding_gene TRUE TRUE AT5G01370.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to hypothetical protein DDBDRAFT_0192009 [Dictyostelium discoideum AX4] (GB:XP_629009.1) 0.382110371601922 2.68884660809676 0.0217299072962137 1 2.78881960263299 5.63707532287093 0.382110371601922 0.191751636194225 AT5G45090_at 3.87471483031903 3.89244522403686 4.53999463537593 4.88691783278392 2.73630092274349 3.85949293528127 2.57102712278660 3.59303272372281 3.46714084003076 3.26405787241301 2.98423539518192 2.87741531474710 2.99417300956708 3.10434406758393 2.84272413152814 2.89653084675958 3.23042814088697 3.54271455448690 3.43022518905147 0.236594482019266 0.240830704600137 0.245131063820549 0.260708097874116 0.243738967852418 0.238025852481813 0.238069539155257 0.240667473108042 0.237494520984929 0.240531299785842 0.246844232478699 0.238506635411588 0.241503272211418 0.239435909733946 0.243043583414533 0.240101626951285 0.247833461985155 0.236594482019266 0.239124991514181 5 0|5 /|- 18219980 18221060 18220324.889 18219980 18222227 - gene protein_coding_gene TRUE TRUE AT5G45090.1 ATPP2-A7 (Phloem protein 2-A7); transmembrane receptor similar to ATPP2-A6 (Phloem protein 2-A6), transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45080.1); similar to Os01g0158400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042077.1); similar to unnamed protein product [Oryza sativa (japonica cultivar-group)] (GB:BAB08190.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) -0.49334812469742 -2.68467993381992 0.021889676999926 1 2.78235776366509 6.9673467699268 -0.49334812469742 0.269583720844568 AT5G58710_at 8.9978322034089 8.86461287149806 10.1309956323715 9.9743950960063 9.45160470651915 9.27725998565835 8.3971552786477 8.16269790718389 7.30010009996027 7.87405153735468 8.68275017433499 8.84637424123807 8.38768118563795 8.63246244828972 8.99661600245856 8.36687040765174 8.27240047460693 8.51557830242915 7.5252295890264 0.133899067695879 0.132966537324871 0.136536578851381 0.143223089886571 0.137765697419174 0.133897891713389 0.132450678227534 0.137194523138838 0.160129461107329 0.139610810582758 0.130506222384746 0.128892365319823 0.131931947910237 0.131268746759563 0.128892365319823 0.130191519380908 0.137586426907274 0.132180951106251 0.142516815953661 5 0|5 /|+ 23735882 23736694 23736236.714 23735001 23736991 + gene protein_coding_gene TRUE TRUE AT5G58710.1 ROC7 (rotamase CyP 7); peptidyl-prolyl cis-trans isomerase Encodes cyclophilin ROC7. Identical to Peptidyl-prolyl cis-trans isomerase CYP20-1 precursor (EC 5.2.1.8) (PPIase CYP20-1) (Rotamase cyclophilin-7) (Cyclophilin of 20 kDa 1) (CYP20-1) [Arabidopsis Thaliana] (GB:Q9SP02); similar to CYP5 (cyclophilin 5), peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT2G29960.1); similar to putative cyclophilin [Oryza sativa (japonica cultivar-group)] (GB:BAD53621.1); similar to Os06g0708500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058535.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) 0.235867564024325 2.68099626923388 0.0220318981730975 1 2.77664581471686 17.2340952418424 0.235867564024325 0.0618261755972579 AT5G39760_at 6.27669927829994 6.50880191193379 6.58943275229812 6.3521474301159 6.85137849639667 7.32096529023563 4.80247325111303 5.32528457584707 4.9233030843784 4.80306544658045 6.2193331269737 6.58362063873948 6.33237050963185 6.57690165209086 5.96294745602380 6.668111030562 6.24638150819887 5.98488737880435 4.42620618634696 0.242273374222524 0.24073413697177 0.236939866769503 0.245275526394496 0.237172359299354 0.243261359537548 0.240367824681596 0.245609400960891 0.236939866769503 0.244918674826302 0.236939866769503 0.243463906730979 0.242282476539447 0.246104421154294 0.254189877811448 0.246688530399277 0.242459468329518 0.238096670418107 0.244586877086364 5 5 + 15929252 15929750 15929542.818 15928644 15930058 + gene protein_coding_gene TRUE TRUE AT5G39760.1 ATHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor similar to ATHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G28920.1); similar to Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation re (GB:ABE90495.1); contains InterPro domain Homeobox domain, ZF-HD class; (InterPro:IPR006455); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region; (InterPro:IPR006456) 0.307017674601320 2.67900927557706 0.0221089941760717 1 2.77356507510103 11.7730699074784 0.307017674601320 0.134495808495828 AT5G63050_at 6.59662984308097 6.436070060223 7.25677776384147 6.97238090560209 7.1974785554473 7.09932422778295 6.70045483289029 6.53027292603756 5.77073100010912 5.18147787335601 7.3565286888847 7.78659334049214 7.40386593625436 6.88573783832035 8.04866570625841 7.46941095388094 7.06909261498875 6.54094901003963 4.99808748063431 0.178963415066805 0.182227243602775 0.188701101983619 0.178348235245078 0.178152606232869 0.187113176778105 0.180101892242681 0.177174964783981 0.196725872776001 0.186265064665708 0.180504430163562 0.177163726143688 0.177679455352589 0.188724884104051 0.177851799935032 0.179839268617959 0.182596189915129 0.186570521746619 0.185580023721474 5 5|0 +|/ 25311225 25311963 25311661.6 25309661 25312221 + gene protein_coding_gene TRUE TRUE AT5G63050.1 EMB2759 (EMBRYO DEFECTIVE 2759) similar to hypothetical protein MtrDRAFT_AC124952g13v2 [Medicago truncatula] (GB:ABE93587.1) 0.238706663728253 2.67896447796045 0.0221107354252838 1 2.77349562116015 13.1671091206164 0.238706663728253 0.0659556641357876 AT5G19600_at 2.65472517702622 2.57212411172874 3.35777966885878 3.32618974604426 2.39837823699891 2.10884473465930 3.84182134805937 3.83530423508084 1.82277306541430 3.79300162076067 4.23058964439803 4.48231737460769 4.02700132731445 4.30436998940435 3.7733222858386 3.22644850564192 3.63013130431493 4.61768431095714 3.46890626423925 0.282660329770396 0.257040504007086 0.272113251192929 0.273186248377617 0.273993819566003 0.26855026222003 0.272279493872562 0.259202504191412 0.281161784941454 0.266393813661565 0.261889795400129 0.263033410854484 0.257040504007086 0.266407491251311 0.26887274619969 0.260269953855571 0.270572507827789 0.267902715501428 0.257040504007086 5 5|0 -|/ 6613129 6613792 6613555.3 6612817 6616999 - gene protein_coding_gene TRUE TRUE AT5G19600.1 SULTR3;5 (SULTR3;5); sulfate transporter Encodes sulfate transporter Sultr3;5. Identical to Probable sulfate transporter 3.5 (SULTR3;5) [Arabidopsis Thaliana] (GB:Q94LW6); similar to SULTR3,2 (SULFATE TRANSPORTER 3,2), sulfate transporter [Arabidopsis thaliana] (TAIR:AT4G02700.1); similar to SULTR3,1 (SULFATE TRANSPORTER 1), sulfate transporter [Arabidopsis thaliana] (TAIR:AT3G51895.1); similar to sst1 protein [Lotus japonicus] (GB:CAL36108.1); similar to sulphate transporter [Brassica napus] (GB:CAE46442.1); similar to plasma membrane sulphate transporter [Brassica oleracea var. acephala] (GB:CAG17932.1); contains InterPro domain Sulphate transporter; (InterPro:IPR011547); contains InterPro domain Sulfate transporter/antisigma-factor antagonist STAS; (InterPro:IPR002645); contains InterPro domain Sulphate anion transporter; (InterPro:IPR001902) -0.229213116892494 -2.67667375285532 0.0221999560569921 1 2.76994425186794 6.54425094544758 -0.229213116892494 0.0524024212457649 AT5G45590_at 4.29360643453245 4.40535530641661 4.26942901856168 4.56945534459922 5.58829784431509 4.7761290470118 4.84499907043158 5.38410102563245 4.01531920968172 4.12874489553837 5.00441994778597 5.9343963969701 4.96945759982002 5.14063863116698 5.13740775593562 4.52612606143040 4.19886557737607 5.01936656622337 3.97271347772993 0.236588664907515 0.237115217263721 0.246041195097413 0.244296679679464 0.242629447020572 0.236045884706856 0.228999431356833 0.237412745515386 0.238368268644729 0.242203229888391 0.233355343280599 0.232371894049029 0.228999431356833 0.228999431356833 0.235046918759029 0.229528322959211 0.248676312187838 0.229281174667432 0.23991859221691 5 5|0 -|/ 18501912 18503419 18502912.8 18501677 18503511 - gene protein_coding_gene TRUE TRUE AT5G45590.1 structural constituent of ribosome similar to Os10g0579500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065508.1); similar to unknown protein [Oryza sativa] (GB:AAG46165.1); contains InterPro domain Ribosomal protein L35; (InterPro:IPR001706) -0.361079806412509 -2.67548823097630 0.0222462709130052 1 2.76810642831075 9.28155197547356 -0.361079806412509 0.177560551739874 AT5G64210_at 0.829238129248684 0.818630602134625 1.31066607642523 1.73116719928158 1.25034212441724 1.10878585056226 1.04126363674576 1.20973989865000 0.279731738116316 0.776325040295928 1.00245628701116 0.622443255318099 1.15335829106709 1.21155676837191 0.981844928953395 0.433139593430280 0.497420990959186 0.884510709191646 0.728859612123566 0.220900994178503 0.215757330078718 0.221734176005671 0.227809678502092 0.222633248107408 0.222804921984458 0.227431383478277 0.217794816879439 0.238944148028801 0.229784508575387 0.223288711375433 0.218378973373942 0.217448357541791 0.215757330078718 0.223303546517041 0.215757330078718 0.219380711128593 0.216029455727471 0.218080193950781 5 5|0 -|/ 25701196 25702207 25701683.3 25701191 25702890 - gene protein_coding_gene TRUE TRUE AT5G64210.1 AOX2 (alternative oxidase 2); alternative oxidase encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria. Identical to Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) (AOX2) [Arabidopsis Thaliana] (GB:O22049;GB:Q4PS98); similar to AOX1A (alternative oxidase 1A), alternative oxidase [Arabidopsis thaliana] (TAIR:AT3G22370.1); similar to mitochondrial alternative oxidase 2 [Cucumis sativus] (GB:AAP33163.2); contains InterPro domain Alternative oxidase; (InterPro:IPR002680) 0.251624565975335 2.67528597996369 0.0222541818467856 1 2.76779290238687 1.88413593129140 0.251624565975335 0.0821519750480638 AT5G46550_at 3.97187650313652 4.4874077392413 5.4569676809022 5.57494675585859 5.57490271181972 5.31215992272432 4.08558386757244 4.27104456516206 3.78851307474810 4.29984828340426 5.24011579121887 5.47072511562893 5.10421874041982 4.70694598189061 4.90215103061915 5.63963732538331 5.96236723720099 4.49483518415815 4.31227095669138 0.225206877268464 0.215983994901922 0.220079298212283 0.215334043822847 0.216954606223819 0.216531865693067 0.216095994233834 0.211913115830885 0.225777027516408 0.216006055050140 0.215300316369737 0.211703008122498 0.211703008122498 0.216553182741029 0.224434175997578 0.215396241454471 0.22306718221434 0.221889127173964 0.218857099368995 5 5|0 -|/ 18901773 18902604 18902167.1 18901536 18904166 - gene protein_coding_gene TRUE TRUE AT5G46550.1 DNA-binding bromodomain-containing protein similar to ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9), DNA binding [Arabidopsis thaliana] (TAIR:AT5G14270.1); similar to Bromodomain [Medicago truncatula] (GB:ABE92903.1); similar to Os07g0507700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059741.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.275731611056006 2.67404304976738 0.0223028597633189 1 2.76586618738514 9.50369554618359 0.275731611056006 0.107115239887966 AT5G23170_at 3.02249428165015 2.67464192548132 3.27606360385177 3.20352260131376 2.95951635409411 3.23223530603046 3.00423655077861 2.71474633689315 2.76251958399264 2.98761466538714 2.91670590773875 3.39513309209139 2.98624976841198 2.99749268214069 2.93609319442281 3.34042567452512 2.87229955846324 3.0304596127024 3.28615404861659 0.204184027810906 0.204963930717550 0.211140959266206 0.210559834497425 0.207892026604146 0.205172136150970 0.203250389668109 0.199620292683592 0.201684231479243 0.203810220697886 0.205162959495198 0.199620292683592 0.211593795916441 0.202434568766912 0.205826995424478 0.206803163010091 0.214622205598246 0.209301068782751 0.204070080953846 5 5 - 7798414 7798979 7798673 7798200 7799451 - gene protein_coding_gene TRUE TRUE AT5G23170.1 protein kinase family protein Identical to Serine/threonine protein kinase-like protein At5g23170 (EC 2.7.11.-) [Arabidopsis Thaliana] (GB:Q50IG5); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G28390.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV31339.1); similar to Os05g0387700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055424.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.260722050914248 -2.67279426728098 0.0223518734099338 1 2.76393049320324 6.04665888783375 -0.260722050914248 0.0922956949603557 AT5G49170_at 2.25030590350541 2.77628862563546 1.19935756752835 1.24783958601179 1.6456842658272 1.25520096939927 1.81863551607633 1.73488523253809 2.99013163498604 2.38482238232984 5.02430001568157 7.18005148269261 4.11397910943685 4.86774793944726 6.56093672863584 4.4658030956346 1.75466846814184 4.07058441428137 2.69611207194849 0.272998515267121 0.271244732836604 0.280960130176464 0.282292610089425 0.276438915309311 0.283254868230348 0.271244732836604 0.272775388565206 0.277260668271216 0.273706994616942 0.272711203183539 0.27981801311643 0.277912821364713 0.283519526424612 0.281994513606983 0.271244732836604 0.276632511133263 0.274240103886990 0.271409155241890 5 5 - 19956077 19956670 19956355.182 19955802 19956797 - gene protein_coding_gene TRUE TRUE AT5G49170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06840.1) 0.283553679518258 2.67224225061818 0.0223735736845529 1 2.76307486116989 5.46358184323129 0.283553679518258 0.114595596875076 AT5G45710_at 5.50042367246638 5.62760691651728 6.09731278922918 6.38612137068607 6.73190044955385 6.08643521573418 5.62253262022371 5.32405983226899 5.5384654448863 5.01008501961454 6.18612253945232 5.95296763008181 6.01502600103861 6.60816775559807 5.41900812739818 6.24344643621762 5.95468968345919 5.70202072338375 5.65684050382267 0.227434411800901 0.224868634531000 0.223838724798031 0.224559601596745 0.226763203702846 0.220207234927776 0.225910115419668 0.226894238976691 0.231522411121204 0.226909653385706 0.222722639450062 0.220207234927776 0.220207234927776 0.225040924203501 0.224379028249464 0.222138311583702 0.233979526796883 0.230393724937772 0.226527019176298 5 5 + 18559358 18559790 18559591 18558077 18560090 + gene protein_coding_gene TRUE TRUE AT5G45710.1|AT5G45710.2 AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-4c (AtHsfA4c) (HSFA4C) [Arabidopsis Thaliana] (GB:Q9FK72); similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to heat shock transcription factor [Phaseolus acutifolius] (GB:AAL12248.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Heat stress transcription factor A-4c (AtHsfA4c) (HSFA4C) [Arabidopsis Thaliana] (GB:Q9FK72); similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to heat shock transcription factor [Phaseolus acutifolius] (GB:AAL12248.1); contains domain HEAT SHOCK TRANSCRIPTION FACTOR (PTHR10015); contains domain HEAT SHOCK TRANSCRIPTION FACTOR (HSF)-RELATED (PTHR10015:SF7) -0.306129522731347 -2.66978916343487 0.0224702601789941 1 2.75927277042826 11.6280381590949 -0.306129522731347 0.134638012915289 AT5G05750_at 7.74654836798064 7.99193251186416 8.70834734945738 8.82455375438997 9.56818456639727 9.24403890711193 7.37494468190593 7.46404535891524 6.62797778654634 6.72463968864628 8.23046813327086 7.45436641467201 7.82796787810106 7.56761579009264 7.41441141772378 7.64158366741061 7.68691226794768 7.55735292481223 6.83709101571927 0.249376961926933 0.228809768757456 0.251967873517366 0.241611797417165 0.235105083222476 0.239406893263171 0.238812503552402 0.234468810810746 0.249211776013514 0.24043037754705 0.229589494763060 0.238655479177347 0.235683939319871 0.246736230274588 0.241458361641266 0.227909702267499 0.257462562894778 0.245052334362381 0.243944768446644 5 5 + 1728063 1728455 1728291.273 1727430 1728934 + gene protein_coding_gene TRUE TRUE AT5G05750.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57340.2); similar to dnaJ-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89081.1); similar to Os01g0556400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043324.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.244732826299552 2.66881906279248 0.0225086103424648 1 2.75776929188778 15.5665682582817 0.244732826299552 0.0747801713336208 AT5G49150_at 1.45112690816433 1.19499539466830 1.62954246054481 1.65843237380167 1.76237704128170 1.78086541015947 1.73821493491462 1.59927915796621 2.19825123038633 2.21912106585029 1.51260024262187 1.67190228964771 1.31855233351859 1.95805847409984 2.26597827349609 1.90614688330376 2.10533082842334 2.10986383742780 2.29037162998151 0.191379989695892 0.185099576112115 0.187013885139401 0.187859841052175 0.187697791101230 0.189873159732552 0.184271487149793 0.188448675097532 0.189438230944601 0.194175538198875 0.187140136093164 0.190470872785162 0.202919269863221 0.196821842301467 0.187778773983597 0.188381947432336 0.207274605260536 0.19744051640434 0.192998901788815 5 5|0 +|/ 19945047 19945655 19945414.2 19942160 19945753 + gene protein_coding_gene TRUE TRUE AT5G49150.1 GEX2 (GAMETE EXPRESSED2) Encodes a transmembrane domain containing protein expressed in sperm cells. similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33437.1); contains InterPro domain Filamin/ABP280 repeat; (InterPro:IPR001298) -0.227195841018431 -2.66468158085414 0.0226729050507121 1 2.75135759890357 3.64783860388268 -0.227195841018431 0.0507740582273664 AT5G45700_at 0.834878373156456 0.781865469333166 0.700457208678562 0.689976893791868 0.488214624156363 0.820860946099629 0.579358447452376 0.735694937337951 0.730102647980856 0.398233915522712 1.16946992071306 1.52747657673207 1.33632254243038 1.32857645259818 1.76864839311057 1.08990003877797 1.11661341875973 1.33980608412908 0.931708141850371 0.178639658018874 0.178779180999721 0.179631600481826 0.187790152162189 0.179636947872692 0.180307321053572 0.17547821113532 0.17547821113532 0.187019640065988 0.178850029817398 0.17547821113532 0.186341129868878 0.187725701492719 0.179131797048398 0.175863815040514 0.177709508074732 0.180382768977668 0.177058781464129 0.187378022280587 5 5 + 18554838 18555264 18555075.091 18554576 18555423 + gene protein_coding_gene TRUE TRUE AT5G45700.1 NLI interacting factor (NIF) family protein similar to NLI interacting factor (NIF) family protein [Arabidopsis thaliana] (TAIR:AT1G29770.1); similar to carboxy-terminal domain phosphatase [Dictyostelium discoideum] (GB:XP_628708.1); similar to Os05g0205100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054894.1); contains InterPro domain Dullard-like phosphatase domain; (InterPro:IPR011948); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) 0.236162457500263 2.66420399546034 0.0226919459201953 1 2.75061757165614 1.71455498592964 0.236162457500263 0.064290419825948 AT5G64840_at 11.1596039373424 11.3649648407072 12.0176710811709 12.0256098675802 11.8962415382316 11.8295183562088 12.3384992204569 11.8741363943651 12.0531389643176 12.4607173818258 12.6123074841749 12.4083422289689 12.367077266577 12.4243575739265 12.2426828010501 12.7496290893173 12.5962725616572 12.4456063205029 12.2691056321310 0.0739510051205443 0.0725311125076639 0.0702625908940933 0.0725458784267763 0.0713460082060025 0.072989112351943 0.0730001566280093 0.0761449102973033 0.0764737444634673 0.0708685207051535 0.0724358304446337 0.0703962616219822 0.0743142635667656 0.0741836471471915 0.0717048690923056 0.0702011114498914 0.0729772661232129 0.0770728708638154 0.0711571101766408 5 0|5 /|- 25934190 25934857 25934664.667 25933949 25937036 - gene protein_coding_gene TRUE TRUE AT5G64840.1 ATGCN5 (Arabidopsis thaliana general control non-repressible 5) member of GCN subfamily similar to ATGCN2 (Arabidopsis thaliana general control non-repressible 2) [Arabidopsis thaliana] (TAIR:AT5G09930.1); similar to 80C09_14 [Brassica rapa subsp. pekinensis] (GB:AAZ41825.1); similar to ABCF-type protein [Zea mays] (GB:AAT51734.1); similar to Peptide exporter, ABC superfamily (ISS) [Ostreococcus tauri] (GB:CAL51500.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.255937404247195 -2.65897261205073 0.0229015583726093 1 2.74251238320023 24.1841665254395 -0.255937404247195 0.0886338858337712 AT5G62980_at 7.51357028516401 7.24191874894031 7.91902717482893 7.93330231326216 8.6288202338188 8.00003532197322 6.81945737384138 6.90993275437875 5.51983738386962 5.9599874286582 7.45634428352342 7.76125874597213 7.61426819061728 7.62307407565988 8.07224918174129 7.54778063842896 7.32004601179678 7.31108827689406 6.4558535907664 0.208487509961131 0.203213978308617 0.202458626684799 0.202857335503263 0.207126295738494 0.220919211855112 0.206819850906517 0.202458626684799 0.259740414889788 0.221154173388951 0.202458626684799 0.202458626684799 0.207589688286301 0.208706038248571 0.208767498458264 0.202458626684799 0.216777718136763 0.219244578784661 0.223251465857172 5 5|0 +|/ 25293668 25294230 25293911.1 25293260 25294492 + gene protein_coding_gene TRUE TRUE AT5G62980.1 dihydroneopterin aldolase, putative similar to dihydroneopterin aldolase, putative [Arabidopsis thaliana] (TAIR:AT3G11750.1); similar to dihydroneopterin aldolase [Lycopersicon esculentum] (GB:AAR23754.1); similar to Os09g0560500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063927.1); similar to Os08g0556200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062473.1); contains InterPro domain Dihydroneopterin aldolase; (InterPro:IPR006157); contains InterPro domain Dihydroneopterin aldolase family; (InterPro:IPR006156) 0.287255001609151 2.65548531731474 0.023042354707235 1 2.73711034466888 14.4041695974479 0.287255001609151 0.119589988132382 AT5G37450_at 0.9337334108717 0.699616334684997 1.19989966703690 0.865753470788567 0.827820582254008 1.18182263577682 1.02958973128619 0.613249749598446 0.701420617003326 0.747919968976154 1.18710249540359 1.27986930814538 1.12147494542496 1.35457926497117 0.978181216874653 1.242352784957 1.35359299664782 1.46869617784273 0.800196121313702 0.220469361549664 0.219586200283682 0.213418234713631 0.213244140661754 0.213590297168556 0.218589586813473 0.224662186001423 0.222018418281598 0.221265618857695 0.216812800885078 0.214617154057941 0.214633954721664 0.216724669621181 0.220268263670050 0.217068744849149 0.213244140661754 0.21593035617739 0.215981337838636 0.21607555480041 5 5 - 14870049 14870584 14870248.364 14870031 14874328 - gene protein_coding_gene TRUE TRUE AT5G37450.1 leucine-rich repeat transmembrane protein kinase, putative similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G01950.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G06840.1); similar to Protein kinase; Adipokinetic hormone [Medicago truncatula] (GB:ABE77704.1); similar to Protein kinase [Medicago truncatula] (GB:ABE77702.1); similar to unkown protein [Oryza sativa (japonica cultivar-group)] (GB:AAW56867.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.285380653596920 2.65417105041257 0.0230956396213657 1 2.73507466575959 1.91797405672777 0.285380653596920 0.118022889959812 AT5G40330_at 2.80192644887349 2.92352731819359 3.0092424189941 3.04721956135278 2.55688915608861 3.06270956060429 2.38313355511467 2.51196154795479 2.74834367084142 2.36650933530560 3.08766044312147 3.60454194952136 4.18405554711749 3.88083690887200 3.39311516812419 3.95753201437500 4.14436531664182 3.59470986157248 2.74915864672928 0.228234785398363 0.228234785398363 0.229124673152801 0.235354744756256 0.229647939937167 0.233844651379246 0.232857329564252 0.241405241633006 0.239854037032129 0.232909870893883 0.232586034457867 0.231273692921536 0.229855112575071 0.243246663768810 0.233059726242621 0.241538651507298 0.238523480968755 0.228234785398363 0.234647551599162 5 5 + 16145154 16146637 16146165 16144953 16146883 + gene protein_coding_gene TRUE TRUE AT5G40330.1 MYB23 (myb domain protein 23); DNA binding / transcription factor Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1. similar to GL1 (GLABRA 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G27920.1); similar to werewolf [Cucumis sativus] (GB:AAM23006.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.259148879634075 2.6499967177857 0.023265693655325 1 2.72860975378735 5.96317088029387 0.259148879634075 0.092980447561497 AT5G56280_at 7.88796913944992 7.57225991326257 8.81945859228632 8.69335957416983 9.00093491513372 8.59758333529815 8.40389572023309 8.08899198470854 6.66913063779532 6.88624179045265 8.3856393249172 8.34387138779753 8.31829223062945 8.26487432220054 8.46782249306017 8.20036210614403 8.14978890892867 8.40723703837148 6.58270229556503 0.164245128618821 0.157870918993897 0.161659282723399 0.161144762247271 0.161256328318655 0.176858179080432 0.160615485526171 0.171881567150268 0.205939853107836 0.174820080660427 0.157870918993897 0.160900387301683 0.162569308610632 0.161568219552469 0.160133358210930 0.171876693403187 0.171272317765756 0.165739592681345 0.192662356233220 5 5|0 -|/ 22800884 22802158 22801696.2 22800610 22802803 - gene protein_coding_gene TRUE TRUE AT5G56280.1 CSN6A (COP9 signalosome subunit 6A) one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation. Identical to COP9 signalosome complex subunit 6a (Signalosome subunit 6a) (AtCSN6a) (CSN6A) [Arabidopsis Thaliana] (GB:Q8W206;GB:Q84WB5;GB:Q941I1;GB:Q9FG76); similar to CSN6B (COP9 signalosome subunit 6B) [Arabidopsis thaliana] (TAIR:AT4G26430.1); similar to COP9 signalosome subunit 6 [Chlamydomonas reinhardtii] (GB:ABC49916.1); similar to Os08g0500000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062152.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639) 0.272302325314904 2.64882347391975 0.0233137125188652 1 2.72679292273102 15.898020422373 0.272302325314904 0.106316726362919 AT5G44240_at 6.88286351829489 7.1507705717804 8.34820157656735 8.39006508729767 8.77579923026225 7.82503347726712 7.12065019952062 6.28065565538929 6.57849818342411 6.29364547934642 7.84816455531223 8.16809153182169 7.51961752118086 7.80523801266071 7.59360508837995 7.80461943804153 7.67431048747457 7.71772001623191 6.31406803508087 0.227405459316992 0.220508890128992 0.230326006454295 0.223458090949490 0.221825614485262 0.232679063542002 0.218335761343922 0.222136704821139 0.224987989713177 0.227953743570009 0.218335761343922 0.221170825696958 0.221361105420438 0.221621525759782 0.227136908804548 0.218335761343922 0.238436876615576 0.222939879023811 0.232541187381854 5 5 + 17840049 17840754 17840497.545 17834846 17840933 + gene protein_coding_gene TRUE TRUE AT5G44240.1 haloacid dehalogenase-like hydrolase family protein Identical to Putative phospholipid-transporting ATPase 2 (EC 3.6.3.1) (Aminophospholipid flippase 2) (ALA2) [Arabidopsis Thaliana] (GB:P98205;GB:Q8W567); similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G27870.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92769.1); similar to hypothetical protein DDBDRAFT_0190219 [Dictyostelium discoideum AX4] (GB:XP_645920.1); similar to phospholipid-translocating P-type ATPase, flippase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93313.2); contains InterPro domain Phospholipid-translocating P-type ATPase, flippase; (InterPro:IPR006539); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.421411460749157 2.64677750998408 0.0233976856351340 1 2.72362485660707 14.6776672798833 0.421411460749157 0.224509538250203 AT5G66170_at 3.45976419319888 2.88122634375319 4.04483805937922 4.00034570008054 3.87530908128933 3.65433351448573 2.91060311487787 2.96037924282413 3.90801084121729 3.8910501098851 3.95591168479266 3.96282733956502 3.28567651629108 3.99628079666082 3.83219542012555 3.66405372357237 4.02611021119431 3.52724914928466 3.82841200208778 0.201010589655608 0.199640352545349 0.196031590714757 0.199670365387219 0.20388639969771 0.197729987458777 0.193674766268293 0.200424816513799 0.202562765400278 0.195555802852656 0.197176732101013 0.196141158186302 0.199758653146481 0.192592552014398 0.199013448892655 0.193381106504742 0.203771202463930 0.19800693701334 0.203207074436491 5 5|0 +|/ 26465065 26465768 26465444.6 26464874 26465953 + gene protein_coding_gene TRUE TRUE AT5G66170.1|AT5G66170.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17850.1); similar to Rhodanese-like domain [Medicago truncatula] (GB:ABE88183.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) -0.273406166084139 -2.64463922437405 0.0234857685472727 1 2.72031413464503 7.30190611769404 -0.273406166084139 0.107794231412589 AT5G16960_at 2.19381581878064 2.35079972968958 2.51182674915348 2.77011849427763 2.4003029136141 2.59392311345489 2.81262372153459 2.33922214211435 2.74077211835027 2.79730715535309 2.39421646700663 2.19571726563726 2.56806820422867 2.57155166380204 2.48810777930872 2.46902539563278 2.94921869780558 2.79321176333085 2.41774870359156 0.196682317643051 0.193269467455554 0.200367219860764 0.196700754070896 0.206761976584235 0.196139533081365 0.203170176457503 0.195703680378988 0.202832429282367 0.19597416239354 0.189940834024812 0.191530888123217 0.19695744293045 0.194201604601314 0.198833673764531 0.192059954837843 0.191744553458719 0.193014061267227 0.198144371346699 5 5 - 5574580 5575030 5574779.545 5574284 5575913 - gene protein_coding_gene TRUE TRUE AT5G16960.1 NADP-dependent oxidoreductase, putative similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) -0.268279667311915 -2.64459202468819 0.0234877165603595 1 2.72024105852575 5.09937024217359 -0.268279667311915 0.102812008956228 AT5G47310_at 8.74104398832768 8.84047090846003 9.74268026613282 9.69763221456392 10.1792793200527 9.72813055016958 9.20346052995103 9.13066250515099 8.57365463180648 8.45511848227805 9.95259604238007 9.71283648691911 9.6357385664731 9.61857974948038 9.4157553557773 9.71401277948495 9.6740292658766 9.2922931189864 8.46815375114344 0.129480989473001 0.126220183401243 0.133776030600001 0.129512918817942 0.134067061578062 0.126924616609082 0.134893946682685 0.126671434397919 0.145636867829063 0.138188711546676 0.122222763907652 0.122222763907652 0.130309237977802 0.126857900897747 0.131036640444028 0.122222763907652 0.13641117394525 0.131316709532965 0.133594954593293 5 5|0 +|/ 19218696 19219866 19219454.1 19218009 19220148 + gene protein_coding_gene TRUE TRUE AT5G47310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17486.1); similar to hypothetical protein 25.t00041 [Brassica oleracea] (GB:ABD64953.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic; (InterPro:IPR008580) 0.247899678666725 2.64348618873799 0.0235334022141656 1 2.71852900972323 18.4708979315585 0.247899678666725 0.081308036169407 AT5G54095_at 1.27558832082801 0.84155365469415 1.31551898576635 0.887032430431744 0.882006867912354 1.12377576280109 1.45061132530701 1.22028343713453 2.23915741572600 1.42774228445461 1.55801516649696 1.24649923297935 1.54819859518527 1.47843237165995 1.53440767955379 1.6188777484289 1.50378310199751 1.92254641374551 1.70443294258465 0.173602955981497 0.176794277620147 0.171074925482855 0.17367460180191 0.170681960059328 0.173781153499288 0.171645968499389 0.179781633375629 0.172296878854784 0.168692704240579 0.169867507065661 0.168692704240579 0.171052919629489 0.168860777385584 0.175918788862476 0.170927301280480 0.171590366074539 0.172801586070412 0.171562788875879 5 5 - 21970097 21970538 21970266.455 21969959 21970733 - gene protein_coding_gene TRUE TRUE AT5G54095.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27580.1); similar to ribonuclease E [marine gamma proteobacterium HTCC2207] (GB:ZP_01223791.1) -0.286769685664116 -2.64341975981862 0.0235361494113578 1 2.71842616749200 2.7954409746149 -0.286769685664116 0.120330864099704 AT5G63810_at 8.41129038847333 8.01186780781135 7.72487824104584 7.42053963847972 9.17388155435573 8.51309916825475 6.1746690023878 5.54651770898858 5.38873680478351 5.86911130272708 7.33127638372424 6.91190306689278 7.0915311986618 7.28074142480772 7.27822315845532 6.31671458662416 7.16028696682349 6.49013452137747 4.82114420890043 0.197163308091527 0.192598393350629 0.204854942715645 0.191876162058382 0.206274578567505 0.198805683959116 0.200113124751758 0.198240454142289 0.222779052152339 0.219327009643902 0.195155091243002 0.191876162058382 0.191876162058382 0.198066364180608 0.195285125753054 0.197880401442428 0.197912312527259 0.194444454299240 0.222244474451858 5 5|0 +|/ 25557621 25558451 25558050.667 25554300 25558755 + gene protein_coding_gene TRUE TRUE AT5G63810.1 BGAL10 (beta-galactosidase 10); beta-galactosidase member of Glycoside Hydrolase Family 35 similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT5G56870.1); similar to BGAL8 (beta-glactosidase 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79283.1); similar to beta-galactosidase [Lycopersicon esculentum] (GB:AAF70823.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91080.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.360121428028828 2.64335382538783 0.0235388764732273 1 2.71832409110145 13.7932256981702 0.360121428028828 0.180123869484890 AT5G53640_at 1.71783946354741 1.70180520839858 1.79001984588023 1.83493401782813 1.41688520541669 1.89434551262684 1.52605685709303 1.71521085024338 2.03349573274983 2.08331644325734 1.50776498945329 1.62007899507468 1.90291877711257 1.83184593577946 2.05672638763916 1.44886807564150 2.01603026285917 1.86388210888955 2.10863263017671 0.208208462447806 0.211634414852608 0.213577376026769 0.216697057205219 0.211268110381046 0.213714814868332 0.208093180562146 0.214018955101006 0.215480785834778 0.214903388961579 0.219556008806289 0.212724757956900 0.209390181008799 0.212637329402061 0.208310297553039 0.214022245932644 0.219642135671578 0.208093180562146 0.212035410032835 5 5 - 21803235 21803908 21803506.455 21803225 21807916 - gene protein_coding_gene TRUE TRUE AT5G53640.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G25850.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.254511160759264 -2.63819614582441 0.0237531728248909 1 2.71034014946608 3.62771847527135 -0.254511160759264 0.0892569517609113 AT5G02070_at 1.23477111175768 0.987949164882226 1.66495225056360 1.15829512814349 1.34447889726587 1.45920152758052 0.752798823929117 1.31635143032662 1.42665986648147 0.619210066933062 1.88700294387626 1.41985927422956 1.56100056544795 1.53515370505328 1.45247049639956 1.39030955971455 1.61254120712961 1.74479078859674 1.32095791048329 0.195596684005639 0.199473117087018 0.190874669356180 0.191938489703244 0.193910779739601 0.193974832281791 0.193841913461522 0.195203393009549 0.194908165127879 0.199279606587528 0.192062442386491 0.199241015818283 0.191537518793652 0.193462682343036 0.196884451888781 0.190315306790244 0.198722936467835 0.193321986564258 0.192366251533552 5 5 - 405980 406467 406236.727 405892 408217 - gene protein_coding_gene TRUE TRUE AT5G02070.1 protein kinase-related Identical to Putative wall-associated receptor kinase-like 20 precursor (EC 2.7.11.-) (WAKL20) [Arabidopsis Thaliana] (GB:Q9LZM4); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G53840.1); similar to Os05g0318100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055181.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV44115.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.307693678458122 2.63500380526549 0.0238867791674697 1 2.70539941741367 2.58868329956708 0.307693678458122 0.139346655892969 AT5G19250_at 11.2050627841502 11.4116463653267 11.3850042803325 11.4652227848611 11.285226116118 11.0287316702387 10.6548343544646 10.6294326027134 11.1265637839864 10.5886110771285 12.0756531098515 12.3368431809738 11.9492578261168 12.1693998452601 12.0262619167508 11.7636192205622 11.4819887972287 11.9669554122912 10.4052350997033 0.0798666677922859 0.0816576642136134 0.0818099306066152 0.0824994693655445 0.081606066709631 0.0878289389234264 0.0820504134878076 0.08318516586661 0.092563178780848 0.0799476871580856 0.0798666677922859 0.0798666677922859 0.0817916857414175 0.0806499064281663 0.0820444307947824 0.0798666677922859 0.0896839700916116 0.0880002161123406 0.0824033674547166 5 0|5 /|+ 6472310 6472730 6472532.3 6471908 6472947 + gene protein_coding_gene TRUE TRUE AT5G19250.1 Identical to Putative GPI-anchored protein At5g19250 precursor [Arabidopsis Thaliana] (GB:P59833;GB:Q67ZQ2;GB:Q6ID89); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06035.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC07018.1); contains domain PR-1-like (SSF55797) 0.229457820930379 2.63151374576252 0.0240336980417882 1 2.69999872875807 22.4721704867267 0.229457820930379 0.0588249520504161 AT5G58840_at 1.94054150606952 1.58034998657196 2.04511236164959 1.58760830094548 1.64641908451542 1.53221588027988 1.67352563273787 1.62313273929758 2.55151699333725 1.85580448768327 1.6439056065261 1.54787297915873 1.72377402941606 1.94262852688674 1.94667936473585 1.95999480506810 2.21324807441423 1.61736990271401 1.80360278821585 0.213586506609382 0.218126407256325 0.217265717709257 0.217701564749334 0.215768248399496 0.215871013923874 0.213586506609382 0.213716104898941 0.221528820767776 0.225620526772219 0.220944818956367 0.219870902572394 0.214993879862838 0.217112481861164 0.219620262352295 0.213586506609382 0.226849605779384 0.214143740991116 0.215612852552552 5 0|5 /|+ 23778636 23779052 23778804.5 23776229 23779285 + gene protein_coding_gene TRUE TRUE AT5G58840.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58830.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58820.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.267140063778703 -2.63093779041721 0.0240580296098359 1 2.69910755022464 3.65098431193863 -0.267140063778703 0.103055427115112 AT5G24320_at 4.11034756857315 3.93428896778977 5.22237975463262 4.64515520085785 6.14104725295174 5.36182341095456 4.86198242629134 4.69364043166319 3.91952282381092 3.41755631418202 5.19005602287973 5.21015136113919 5.55893782032719 5.33258929915258 4.31270461060477 6.09331680464295 5.79511137123283 4.53137161066495 3.88081391131033 0.247451340370264 0.239072238150388 0.247652889599709 0.241411746250212 0.238253644053692 0.250594262453512 0.244292295203616 0.241901548128691 0.263631236417392 0.256628538480729 0.247838483676459 0.238253644053692 0.238253644053692 0.243659598422995 0.253665821457920 0.241504997873660 0.245025848433904 0.242553625302877 0.238253644053692 5 5 - 8284941 8285283 8285093 8284861 8287654 - gene protein_coding_gene TRUE TRUE AT5G24320.1|AT5G24320.2 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G53500.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.349080852605557 2.63030187202917 0.0240849227037708 1 2.69812361803363 9.36749689955508 0.349080852605557 0.173029884025136 AT5G62210_at 1.23733581808192 1.33492697027004 1.67164342802580 1.20817441160014 1.15194994021283 1.14795575936114 1.09275309530162 1.06942191904105 0.996754187697715 1.46228304111513 2.00770267009597 1.83586880137430 1.96044440254879 1.62497028039401 2.08644715234607 1.79378901740009 1.65816989316488 1.70192123685359 1.32616527874330 0.191613229351934 0.180012127570634 0.189199785722612 0.188182735362232 0.187822198387813 0.188500803258436 0.187529060984318 0.183117030245154 0.197827605987183 0.186753583573695 0.185583448564212 0.187763241576680 0.189253290181908 0.185912363296952 0.189735871847295 0.186244225573472 0.186291133773127 0.181992867949879 0.186542328769185 5 5|0 -|/ 25003769 25004569 25004153.8 25003553 25004715 - gene protein_coding_gene TRUE TRUE AT5G62210.1 embryo-specific protein-related similar to ATS3 (ARABIDOPSIS THALIANA SEED GENE 3) [Arabidopsis thaliana] (TAIR:AT5G07190.2); similar to CAPIP2 [Capsicum annuum] (GB:AAT35533.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976); contains InterPro domain Embryo-specific 3; (InterPro:IPR010417) 0.247266552426859 2.62973947334261 0.024108731455691 1 2.69725346412595 2.78696934321562 0.247266552426859 0.082066575862556 AT5G54160_at 10.1983903352460 10.3405676823115 10.8856062196785 10.9175642084252 10.7076234915243 10.3454665524123 11.1683585874355 11.1710287154691 10.7763319744482 11.1954820009671 12.1507198855614 11.7606072189246 11.4602301528045 11.6428214390741 11.8583765263361 11.1184848655046 11.2781427306274 11.7949939849701 10.8449526981758 0.0866819970862343 0.084980075125866 0.0902328539448349 0.0885466058313165 0.0870572282057636 0.0871123619964938 0.0848239317422255 0.0883400517368234 0.0931024151816452 0.0837852200268085 0.0832992696536504 0.0848753670404961 0.0832992696536504 0.0868493778496991 0.0849213972728044 0.0848187654938179 0.0858633159374754 0.0858387680080252 0.0837512678708574 5 5|0 +|/ 22000637 22001343 22001034.9 21999222 22001589 + gene protein_coding_gene TRUE TRUE AT5G54160.1 ATOMT1 (O-METHYLTRANSFERASE 1) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase Identical to Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1) (Flavonol 3- O-methyltransferase 1) (OMT1) [Arabidopsis Thaliana] (GB:Q9FK25;GB:O49964;GB:Q42170); similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77530.1); similar to O-methyltransferase [Fragaria x ananassa] (GB:AAF28353.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077); contains InterPro domain Dimerisation; (InterPro:IPR012967); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.235424336801414 -2.62877284641471 0.0241497074195100 1 2.69575793353895 22.0028103865657 -0.235424336801414 0.0675579540124065 AT5G43410_at 2.63752917256458 2.30085424027052 2.98732678663956 2.66692352146798 2.53683444546936 2.82759339698669 2.60929457164216 2.80183194307573 2.81716121593923 2.78192103088411 3.10407286503980 2.86648050440602 2.68999629572041 2.65501879655193 3.09014374046965 2.40375583882589 3.17266501998972 2.82747990334226 2.92309425489739 0.195318511666613 0.196781187064801 0.187566423454758 0.193135603689971 0.187685945721950 0.188689683243138 0.188788468430865 0.193096588586966 0.192330321827577 0.187566423454758 0.200283959530678 0.192059211429304 0.192547264014607 0.202877211047275 0.191322355541062 0.193148411620383 0.205971950653175 0.190849116084127 0.19700545926333 5 5 - 17452383 17452603 17452475.273 17452238 17452633 - gene protein_coding_gene TRUE TRUE AT5G43410.1 ethylene-responsive factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to ATERF14 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 14), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G04370.1); similar to putative transcription factor Pti5 [Oryza sativa (japonica cultivar-group)] (GB:BAD46612.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.264340840580425 -2.62802976720127 0.0241812539465537 1 2.69460831359395 5.51698707032297 -0.264340840580425 0.100553496865204 AT5G45680_at 9.89245824170347 10.0838415798219 9.89389674040642 10.0104154739835 10.6870281268353 10.2120564279733 10.5985072787389 10.3455848003818 10.4273348588758 10.4726334550215 11.3956280258889 11.5332122708303 10.7755770030213 11.1342046635387 11.3891622859136 11.1365072491386 10.4886236694345 10.9935697995848 10.1726937000158 0.123265748960714 0.111305986907073 0.121396381333830 0.117799378986 0.111269539133158 0.120742338677036 0.114821550043097 0.114503926205570 0.118768604005311 0.111269539133158 0.111444465546004 0.111956244670095 0.113370338948804 0.115888416959495 0.119122102090626 0.111269539133158 0.126912488788856 0.117340203451470 0.112941063736681 5 5|0 +|/ 18548264 18549313 18548682.778 18548107 18549564 + gene protein_coding_gene TRUE TRUE AT5G45680.1 FK506-binding protein 1 (FKBP13) Identical to FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (AtFKBP13) (FK506-binding protein 1) (FKBP13) [Arabidopsis Thaliana] (GB:Q9SCY2;GB:Q8M8T4); similar to immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative [Arabidopsis thaliana] (TAIR:AT4G39710.1); similar to Chain A, Crystal Structure Of Atfkbp13 (GB:1U79); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) -0.264541554387765 -2.62686359458727 0.0242308447176621 1 2.69280420490038 20.9471558965088 -0.264541554387765 0.100873516354515 AT5G56290_at 9.54403261284826 9.58255963844613 10.1435203484515 10.1584947578778 10.2441673058045 10.1293140620572 9.66824548884336 9.64054118063176 9.56769965240677 9.62853676092254 9.8675181465986 9.90581809278824 9.9711612320503 9.97938573424827 9.84383511603546 10.1952869447735 10.2166098329119 10.0272844635192 9.67276303629373 0.0808428828247765 0.0778751041268428 0.0821847107559802 0.0804395285217678 0.0825550515674433 0.0766348415598028 0.0806658335631713 0.0786088090100344 0.0871417140550817 0.0793180424124236 0.0773770350161108 0.0769000392054659 0.0796174224667303 0.0811242960282385 0.0798514767493704 0.0779360640125417 0.0783865066937952 0.0783338161460626 0.0796254104335069 5 5|0 +|/ 22808320 22809159 22808657.3 22803732 22809387 + gene protein_coding_gene TRUE TRUE AT5G56290.1 PEX5 (PEROXIN 5); peroxisome targeting signal-1 binding Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions. similar to SPY (SPINDLY), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11540.1); similar to peroxisomal import receptor PTS1 [Brassica napus] (GB:ABB92565.1); similar to peroxisomal targeting signal-1 receptor [Citrullus lanatus] (GB:AAC97489.1); similar to peroxisomal targeting signal 1 receptor; PTS1 receptor; Pex5p [Nicotiana tabacum] (GB:AAC69177.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.211240001563429 -2.62569429360087 0.0242806696685881 1 2.69099535531546 19.7007905553234 -0.211240001563429 0.0216611361561041 AT5G17840_at 8.18053264138643 8.21014210724872 8.40454546100057 8.36257188503512 8.60564970925045 8.69936618719971 7.84974962160806 8.00281230644774 7.30789212782287 7.6484656263658 8.66904564252631 8.35829747860836 8.23606418378696 8.25771612091918 8.53609334660428 8.23768081947361 8.23990550178616 8.30991516062438 7.3564560242184 0.119567981590245 0.108945572024725 0.113521345062757 0.110519845694613 0.113832166599058 0.122816236653620 0.118533500955860 0.118070385219328 0.132348366414201 0.130025069711237 0.121214717823095 0.116400464400434 0.119220938197628 0.125533341545747 0.117106302139944 0.121353639065386 0.119102166044229 0.116237825796831 0.119597219271213 5 5|0 -|/ 5895882 5897033 5896409.3 5895678 5897152 - gene protein_coding_gene TRUE TRUE AT5G17840.1 chaperone protein dnaJ-related similar to hypothetical protein MtrDRAFT_AC137986g14v1 [Medicago truncatula] (GB:ABE92416.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) -0.214581889639119 -2.62358162188739 0.0243709499306457 1 2.68772741114172 16.1860184271939 -0.214581889639119 0.0323058645141882 AT5G55010_at 1.13603295002347 1.16838262214071 1.53529563484210 2.46165343783805 3.17532014292782 1.6369715578462 2.22525945711255 0.987535118075877 0.908572453425829 0.730757468243202 1.32663408716517 1.26790771232933 2.30342603900548 1.95684640462349 0.625763466010575 1.78674898773840 1.6778408638298 1.25837475244978 0.922648774221539 0.246494028021457 0.23129101290966 0.254152296635176 0.233851967314513 0.283510803890874 0.245267089413239 0.258241751748595 0.234756288174565 0.242196708157778 0.23129101290966 0.231318892080892 0.234894733061081 0.242507800293969 0.242877630564193 0.252053305612432 0.23129101290966 0.23129101290966 0.250461453666876 0.23290057207669 5 5 + 22339169 22339414 22339277.909 22339126 22339455 + gene protein_coding_gene TRUE TRUE AT5G55010.1 unknown protein 0.643368927883414 2.62306708149905 0.0243929879519144 1 2.68693155401091 2.98052420898794 0.643368927883414 0.377468012838111 AT5G27440_at 0.788857380733491 1.22063711978728 1.48003294423772 1.34147918667792 1.71512623942526 1.38908190331475 1.17621541645453 0.990042616427036 0.870596116312587 1.14196670643575 1.07119630870126 1.75800031181595 1.33951199505796 1.38085660545462 1.07543228988567 1.14605236567746 1.22481700596841 1.76642248462612 1.25588698442442 0.214291149816516 0.215193102361483 0.226884883813681 0.222423186743766 0.212394510042659 0.218463780655342 0.21700595559592 0.215627058988981 0.217784447863734 0.218421834343767 0.217065417943829 0.219271727655353 0.213443240791801 0.222817940069823 0.227001089104580 0.215556493991272 0.227497281385117 0.212394510042659 0.218983502561755 5 5 - 9689684 9690199 9690011.364 9689501 9690321 - gene protein_coding_gene TRUE TRUE AT5G27440.1 similar to Ctp [Cucumis melo] (GB:AAO45758.1) 0.265114076090703 2.62257839613335 0.0244139368627644 1 2.68617570571857 2.48006882086026 0.265114076090703 0.101881457294944 AT5G48140_at 1.71723723572548 1.45890451500165 1.46704732879462 1.77069177003437 1.10114440832040 1.64819306903167 1.30972121846816 1.67883269707766 2.66167895144331 1.30973644112647 1.43698753195572 1.45982670847479 1.18944964013731 1.88065731166089 1.34304573839839 1.53511048186049 1.87192989969393 1.90759141988340 1.71597758981885 0.180522083019387 0.187933618852893 0.188866934552059 0.180522083019387 0.189592006102756 0.181306267217191 0.185607417918490 0.180522083019387 0.192539318521124 0.186569761835732 0.180522083019387 0.182158741150246 0.185979780386471 0.186997494165207 0.185255199395705 0.180522083019387 0.18735341354953 0.194342366910544 0.185983564367479 5 5 - 19536140 19536776 19536370.727 19535996 19537752 - gene protein_coding_gene TRUE TRUE AT5G48140.1 polygalacturonase, putative / pectinase, putative similar to polygalacturonase 3 (PGA3) / pectinase [Arabidopsis thaliana] (TAIR:AT3G07820.1); similar to polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] (TAIR:AT3G07830.1); similar to pollen-expressed protein MF6t [Brassica juncea] (GB:ABG38467.1); similar to pollen-expressed protein MF9c [Brassica oleracea] (GB:ABG38468.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -0.299175421460226 -2.62142309108609 0.0244635332291116 1 2.68438886852686 3.25590778145891 -0.299175421460226 0.133425175215128 AT5G47560_at 9.90069098161555 10.0588301580789 11.177309893976 11.2870124973450 11.0764938378498 11.0833782506768 11.0694646433379 11.2464986269630 10.2866857076392 10.5834441456496 10.5113668985808 10.1379647519822 11.1276890285733 10.8695923220032 9.54279837862976 10.8625960788286 11.2756872203849 10.498090611076 10.3877308720251 0.0885263396882498 0.0816451773677248 0.08080444584377 0.0790286675924335 0.082246779515619 0.0803416247866157 0.0872038319278345 0.0836984465005862 0.0878193226978059 0.080150614761989 0.084489809609138 0.0823845668466632 0.0805794896080633 0.0857859630549427 0.0870976371124267 0.078599527788339 0.0882201864222183 0.0850779951263409 0.0800355404856418 5 5|0 -|/ 19305271 19305717 19305503.8 19304595 19307691 - gene protein_coding_gene TRUE TRUE AT5G47560.1 ATSDAT/ATTDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transporter/ sodium:dicarboxylate symporter Encodes a tonoplast malate/fumarate transporter. Identical to Tonoplast dicarboxylate transporter (AttDT) (Vacuolar malate transporter) (Sodium-dicarboxylate cotransporter-like) (AtSDAT) (TDT) [Arabidopsis Thaliana] (GB:Q8LG88;GB:Q9FEH9;GB:Q9FGK1;GB:Q9MAW4); similar to vacuolar citrate/H+ symporter [Citrus sinensis] (GB:ABK27327.1); similar to sodium-dicarboxylate cotransporter, putative [Brassica oleracea] (GB:ABD64997.1); similar to sodium/dicarboxylic cotransporter, putative [Brassica oleracea] (GB:ABD64928.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) -0.220346604119762 -2.62062227595952 0.0244979701481733 1 2.68315035628879 21.3737148960780 -0.220346604119762 0.045269951241322 AT5G62050_at 7.18786682063622 7.52986026846611 8.19741190154307 8.14922902173848 8.07093043507631 7.97993755260246 7.30951691242889 7.6973230697971 5.8400429185631 5.66851172895396 6.12930563920161 6.38656096494209 6.59646420522562 6.20188310644919 6.517781229203 6.39098213620535 7.06917991759383 6.60584880807444 5.26264129893689 0.222751541279915 0.217571082937868 0.218615051737158 0.218536953084270 0.220293499472367 0.222887467849711 0.219400370621459 0.215538736271168 0.214148308058636 0.218783109116431 0.213686748971531 0.213209098422449 0.220951812853852 0.219403862210256 0.220891001739018 0.211837294312999 0.227776991537678 0.21782685739916 0.231608174988734 5 5 - 24941356 24942197 24941709.727 24941000 24944538 - gene protein_coding_gene TRUE TRUE AT5G62050.1 OXA1 (Oxidase assembly 1); protein translocase essential factor for protein sorting and assembly into membranes Identical to Inner membrane protein OXA1, mitochondrial precursor (Oxidase assembly 1 protein) (AtOXA1) (OXA1) [Arabidopsis Thaliana] (GB:Q42191;GB:Q42190); similar to OXA1 protein, putative [Arabidopsis thaliana] (TAIR:AT2G46470.1); similar to putative Oxa1 protein [Oryza sativa (japonica cultivar-group)] (GB:AAG13422.1); similar to Os10g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065089.1); contains InterPro domain 60 kDa inner membrane insertion protein; (InterPro:IPR001708) -0.254580323467384 -2.6199663143103 0.0245262137889069 1 2.68213590468824 13.8040841976260 -0.254580323467384 0.0912368131041192 AT5G60170_at 7.46352555796522 7.49268098282102 8.72163811631676 8.64768524714045 8.83551217014914 8.50206553076068 7.90807964901824 7.64456302025158 6.22633014835489 7.15536939061978 8.11708600534657 8.24264198385998 8.16261775431157 8.44464836670869 7.90095000701579 8.54044618066865 8.46770566967261 7.86658666802686 7.352140496367 0.159669206615153 0.153862679093231 0.145322319750802 0.146206998186311 0.152397072733123 0.156722831074447 0.145089224911174 0.150433775085819 0.168625699845472 0.166873689169844 0.156675672668861 0.15128580300029 0.155808730191359 0.152958214792817 0.156015600098153 0.157527948552223 0.162156032030869 0.151680469835958 0.147565165709951 5 5 + 24249049 24249575 24249311.545 24244643 24250099 + gene protein_coding_gene TRUE TRUE AT5G60170.1 RNA binding similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G45630.1); similar to RNA-binding re (GB:ABE87889.1); contains InterPro domain RNA recognition, region 1; (InterPro:IPR003954); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.240205209263407 2.61905724008538 0.024565408969123 1 2.68073006467389 15.7165264549188 0.240205209263407 0.0748242300930045 AT5G53410_at 3.17296403488195 2.61613017111025 2.81726961382771 3.10558728308352 2.76175525708509 3.29482212469726 3.17750401654193 2.85897811505265 3.12801381206693 3.0161087885612 3.20274207907498 3.32942772031254 3.06917256178654 3.33293152888525 3.52115388601527 3.07084629963521 3.72505156021249 3.20677722435920 3.06444016678366 0.175792078389531 0.17806842156625 0.173071666524132 0.171273052070624 0.167645075261976 0.169522866539331 0.178618754271690 0.168970598812195 0.171450062601929 0.172705224862555 0.167645075261976 0.172347240903836 0.172124807163981 0.174912575613023 0.167645075261976 0.170038198802725 0.172866194029971 0.177628415724087 0.167645075261976 5 5 + 21685200 21685218 21685210.455 21685165 21685272 + gene protein_coding_gene TRUE TRUE AT5G53410.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52080.1) -0.321887467312022 -2.61841376405504 0.0245931902325319 1 2.67973499683763 6.16401821703794 -0.321887467312022 0.152721114915907 AT5G03180_at 3.68346524398332 3.38280297226960 5.14443185246458 4.93180212513904 5.94045098259164 5.10627966643723 4.77054413329581 4.4022816988956 4.13605372631487 4.06358606395921 5.25835549329375 5.21665693888414 5.69813554574541 5.31669395014735 5.37836948089892 5.64910335497557 5.83632714875577 5.4268756108633 4.46972476442455 0.213975734533104 0.227257742634492 0.215729118885036 0.223655617555417 0.220544028698752 0.212634138536555 0.223983399522195 0.215945131808273 0.219727608732879 0.226635495037489 0.214343335185843 0.213252200261171 0.213240893473315 0.217053154586066 0.216026491838429 0.213541685152943 0.241350533786182 0.212634138536555 0.217228180511491 5 5 - 754272 754933 754588.273 753950 756645 - gene protein_coding_gene TRUE TRUE AT5G03180.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G09760.1); similar to Os06g0677300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058355.1); similar to zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45521.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.343578704026436 2.61644071071513 0.0246785683688952 1 2.67668407102092 9.5181004387238 0.343578704026436 0.17018130949069 AT5G23010_at 12.7087944598272 12.6687978683354 12.8917615829667 12.9061535392758 13.0471015013864 13.0634157333704 12.7282168782121 12.7682827648994 11.3220086331754 12.7991838602417 13.257804030521 12.8648244544619 13.086213944003 13.3414797088318 12.6613564517042 12.8787867095053 13.3156286870877 13.3406709603444 11.9768523336277 0.0718423435110767 0.0700974584883434 0.0709702953341709 0.0706812565180016 0.0715179549775956 0.0725480395756975 0.0700974584883434 0.0700974584883434 0.0773843030164626 0.0728667364970242 0.0702442437395567 0.0709915448508719 0.0700974584883434 0.0727098262141634 0.0726959364702685 0.0734353580647002 0.0701750004802046 0.0722889273859915 0.0739054155561126 5 5|0 +|/ 7705455 7706744 7706093.556 7703095 7706894 + gene protein_coding_gene TRUE TRUE AT5G23010.1 MAM1 (2-isopropylmalate synthase 3); 2-isopropylmalate synthase Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates. similar to MAM-L (METHYLTHIOALKYMALATE SYNTHASE-LIKE), 2-isopropylmalate synthase [Arabidopsis thaliana] (TAIR:AT5G23020.1); similar to methylthioalkylmalate synthase a [Boechera divaricarpa] (GB:CAJ55512.1); similar to methylthioalkylmalate synthase b [Boechera divaricarpa] (GB:CAJ55513.1); similar to 2-isopropylmalate synthase [Brassica oleracea] (GB:AAV25874.1); contains InterPro domain Pyruvate carboxyltransferase; (InterPro:IPR000891); contains InterPro domain Alpha-isopropylmalate/homocitrate synthase; (InterPro:IPR002034) 0.208124932830008 2.61453475823518 0.0247613215088859 1 2.67373718119025 25.4108291546953 0.208124932830008 0.0104955694464745 AT5G35330_at 8.37374336913945 8.46092254947876 9.26876671409235 9.03807911167401 9.89064993017282 9.67476482887078 8.2643673370116 7.241375313508 7.54094688380887 8.27599963176876 9.47313682048976 9.13359652006466 8.99568401403026 8.90895110508098 8.9193588112547 9.1867491808246 9.34658583159522 8.61784377061601 8.46129031173889 0.148931127745912 0.137433127085904 0.145893278793706 0.137433127085904 0.145136111198113 0.144178152979939 0.145941761926345 0.148323736801635 0.162808660107413 0.144772711527524 0.140227460762029 0.137433127085904 0.142291664462908 0.141359318934558 0.146621655900445 0.137433127085904 0.142473433565057 0.145235022632185 0.143946406246824 5 5|0 -|/ 13540979 13542216 13541633 13540705 13543017 - gene protein_coding_gene TRUE TRUE AT5G35330.1|AT5G35330.2 MBD02 (methyl-CpG-binding domain 2); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to MBD12 (METHYL-CPG-BINDING DOMAIN 12) [Arabidopsis thaliana] (TAIR:AT5G35338.2); similar to putative methyl-binding domain protein MBD108 [Zea mays] (GB:AAK40309.1); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) 0.363732114825732 2.61418523288697 0.0247765270679637 1 2.67319679212973 17.3593255771685 0.363732114825732 0.185897768303107 AT5G24800_at 8.42295669878432 8.70169226147813 8.49495745918947 8.61642281849931 9.84000298128899 9.59403719670835 8.61612297750943 8.41770659475664 9.43467842882347 9.22680395165921 10.1411834064740 10.4699953785897 9.52406155195453 9.54502891053524 10.1200245634227 10.2069187749392 8.95556954858374 9.95578407048406 9.70217611230937 0.130738057988734 0.114499466999637 0.121849957625211 0.122966985148017 0.113924320670828 0.121691234499201 0.123369641849632 0.125798857585657 0.12653490979492 0.118378232989497 0.115008372414996 0.115793236718887 0.115233606490731 0.118970606407484 0.117725940475871 0.113924320670828 0.131628854053477 0.118355708914729 0.114955600820052 5 5 + 8515739 8516510 8516296.091 8515203 8516672 + gene protein_coding_gene TRUE TRUE AT5G24800.1 BZO2H2 (basic leucine zipper O2 homolog 2); DNA binding / transcription factor Encodes bZIP protein BZO2H2. similar to BZO2H1 (basic leucine zipper O2 homolog 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G02640.2); similar to bZIP transcription factor bZIP16 [Glycine max] (GB:ABI34676.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.240076870270936 -2.60825097778505 0.0250361024987068 1 2.66402346984285 18.4976741768036 -0.240076870270936 0.0758910457848648 AT5G14220_at 6.70189172655222 7.00914526141 7.53821898292747 7.28310345497537 7.73069085145844 7.40153029630141 6.53944659554427 6.42614434474808 6.44195048225663 7.0553467024957 7.59346198014049 8.05616373946157 7.54598500395926 7.21688274821956 7.9464371315974 7.81479249111668 7.29776786616989 7.39251890626226 7.18115557300195 0.169027361824520 0.161661886812594 0.166802402370138 0.167046338109095 0.165580080004072 0.170595467960872 0.165377332842819 0.166275019584396 0.178647774587779 0.164751701832077 0.161954659341093 0.161661886812594 0.161661886812594 0.172380423055765 0.175105082093925 0.161661886812594 0.178483622501667 0.165089875202125 0.170193768847116 5 5|0 -|/ 4583538 4584679 4583971 4583271 4587429 - gene protein_coding_gene TRUE TRUE AT5G14220.1 HEMG2/MEE61 (maternal effect embryo arrest 61); oxidoreductase/ protoporphyrinogen oxidase similar to PPOX (PROTOPORPHYRINOGEN OXIDASE), protoporphyrinogen oxidase [Arabidopsis thaliana] (TAIR:AT4G01690.1); similar to protoporphyrinogen IX oxidase [Glycine max] (GB:BAA76348.1); similar to Amine oxidase [Medicago truncatula] (GB:ABE79724.1); similar to Protoporphyrinogen oxidase, mitochondrial (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) (GB:O24164); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Amine oxidase; (InterPro:IPR002937); contains InterPro domain Protoporphyrinogen oxidase; (InterPro:IPR004572) -0.253504235153040 -2.60465051905232 0.0251949029645081 1 2.65845911642152 14.3291808488817 -0.253504235153040 0.0916818617827884 AT5G57910_at 5.75152700378181 6.0908968921243 7.2333841575306 7.54186110955719 7.57763032239697 7.69561692674592 3.96064032521113 4.25988482696988 5.47647330942432 4.6057724714206 5.39364319516079 4.47904896101904 4.69300216978864 5.21190496849407 4.13986471271402 5.16572345319781 5.02380583722411 5.34928125367587 4.69575643587957 0.208513912994783 0.200912619295774 0.203434558308273 0.202045643794599 0.202385188608236 0.205014578423144 0.200893523778678 0.209785099525292 0.204262445579889 0.208056469024545 0.20215296864946 0.205986133408209 0.20515363508998 0.200893523778678 0.202751113522933 0.205856512363058 0.203040097980882 0.205729152834041 0.208653239218203 5 5|0 -|/ 23468553 23469641 23468980.1 23468375 23469840 - gene protein_coding_gene TRUE TRUE AT5G57910.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30630.1); similar to tRNA-binding arm [Medicago truncatula] (GB:ABE78788.1) 0.258302407770090 2.60292395179156 0.0252714073504531 1 2.65579114171568 11.1929477244485 0.258302407770090 0.096941210026848 AT5G63860_at 8.23614597888885 8.40407097720372 8.54927088501408 8.69965949834695 9.123678638107 8.84916086612193 7.90971122813557 8.28999207983492 7.21188238789846 8.09290441474309 9.61466403240413 9.60612688960574 9.55724131608394 9.58937547867175 9.36308748686805 9.40874839474662 9.04004016324158 8.92472512947178 8.12920564381223 0.132391944562067 0.129122370102599 0.131627291070912 0.128949178232128 0.132408325373517 0.143767083612747 0.135054567152687 0.140477182456059 0.186521118603486 0.132277976302438 0.132406555637594 0.128075853647612 0.132849045694259 0.132474205269949 0.140311176287691 0.132482010874656 0.133316534429127 0.138233454929433 0.129888670650960 5 5|0 -|/ 25572352 25573614 25572866 25571734 25575978 - gene protein_coding_gene TRUE TRUE AT5G63860.1 UVR8 (UVB-RESISTANCE 8) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to Os04g0435700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052849.1); similar to Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] (GB:ABE79269.1); similar to Os02g0554100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047115.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 0.251456164156728 2.59900377994288 0.0254459646865386 1 2.64973438077011 17.1073772323923 0.251456164156728 0.0900531432208234 AT5G25510_at 6.81632264164079 6.9921177330427 7.54955277167754 7.5046211585157 8.119610227343 7.88791934112547 7.51283945521492 6.95153421199411 6.69407080546376 6.473107253609 7.77940359872854 7.51788660098317 7.49849435567473 7.25337656439382 7.65746588712749 7.42292617471072 6.93601584569326 6.86580214467674 6.53787115774471 0.187159606123561 0.18259649472825 0.184068053243119 0.186038204073069 0.190745025038611 0.182005932931305 0.188532266753230 0.191784650266118 0.199521208675192 0.191535110803603 0.185037132239576 0.180524439247861 0.181976490382387 0.190165984129996 0.191669681516729 0.181872097372185 0.197455972538239 0.197397535977181 0.181740457231325 5 5 - 8882746 8883387 8883076.818 8882471 8884837 - gene protein_coding_gene TRUE TRUE AT5G25510.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform (PP2A, B' subunit, iota isoform) (AtB' iota) (B'IOTA) [Arabidopsis Thaliana] (GB:Q93YV6); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B' (B'gamma) [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] (GB:CAC85920.1); contains InterPro domain Protein phosphatase 2A, regulatory B subunit, B56; (InterPro:IPR002554) -0.270467258128223 -2.59746752583779 0.0255146956847031 1 2.64736116569575 14.3842002602881 -0.270467258128223 0.109677208428946 AT5G48650_at 2.40067445480486 2.32741152885522 2.61951782958210 2.67570738630643 2.38311549861953 2.65658535269052 2.07769147728161 2.38119580886849 2.86016478189279 2.73828118797445 2.51717474124139 2.54118023626652 3.01682002846294 2.77874860063188 2.55895941170064 2.73722540408649 2.96200405492688 2.60672604141741 2.97218005545501 0.198348859842965 0.193565974802381 0.195491794820565 0.200209657753767 0.213694327942909 0.201369229394357 0.212609816651798 0.193565974802381 0.199359077874707 0.205643471083362 0.195214169734749 0.199991924884784 0.202705670235521 0.206402297593259 0.198767917036096 0.202560390734832 0.202100724406857 0.201304847266959 0.207220575475599 5 5|0 +|/ 19745784 19746727 19746241.875 19743959 19746880 + gene protein_coding_gene TRUE TRUE AT5G48650.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD23032.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.236243086070865 -2.59606414264554 0.0255776425340281 1 2.64519337660977 5.22610249543402 -0.236243086070865 0.0724818884396675 AT5G66140_at 8.1987636711874 8.12377649293042 9.1759868797993 9.02238535978788 9.21220604584356 8.84092090660125 8.10138540420495 7.70924747212061 7.82272823919406 7.28152071926948 8.59081299296576 8.5232361002626 8.43311966405315 8.53972659155512 8.7802368888706 8.7228120735982 8.52880956782598 8.55154362608986 6.92730515113074 0.149509259481036 0.143829290414803 0.153472380507498 0.142174857175918 0.148356122744756 0.157422838121968 0.149220915825547 0.147772140863729 0.161973936723398 0.159315084496854 0.142609758978943 0.144011016242816 0.143100868911670 0.152806853087513 0.142383001915029 0.138073799666149 0.146848158429175 0.143551051428274 0.154546949515774 5 5 - 26454769 26455303 26455124.182 26454396 26455990 - gene protein_coding_gene TRUE TRUE AT5G66140.1 PAD2 (20S proteasome alpha subunit D2); peptidase Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. Identical to Proteasome subunit alpha type 7-B (EC 3.4.25.1) (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-2) (Proteasome component 6B) (Proteasome component 6C) (PAD2) [Arabidopsis Thaliana] (GB:O24616); similar to PAD1 (20S proteasome alpha subunit D1), peptidase [Arabidopsis thaliana] (TAIR:AT3G51260.1); similar to proteasome, alpha subunit-like protein [Solanum tuberosum] (GB:ABA40445.1); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353); contains InterPro domain Proteasome alpha-subunit; (InterPro:IPR000426) 0.258649111321962 2.5959287612421 0.0255837229970023 1 2.64498426300983 16.5119033080681 0.258649111321962 0.0980231044315977 AT5G42310_at 9.4268672820738 9.61217549662633 10.1763479882014 10.0941888747575 10.2369093847788 10.2287418166537 10.1851411127680 10.0370904917474 9.74346743985903 9.69738284394107 10.2642984140318 10.37380295819 10.0706485569116 10.2684779515715 10.1007705943313 10.5543760818141 10.1639061125347 10.1386012965663 9.69258091573666 0.0749818972866579 0.0756467176460079 0.079095399713951 0.0771100485880919 0.0767569376362893 0.0780717618725846 0.0749818972866579 0.0776713858248708 0.0785232267206577 0.0770432491562912 0.0774538169059845 0.0749818972866579 0.0804705443329142 0.0749818972866579 0.0758045095596669 0.0749818972866579 0.083170383070007 0.0796326026365206 0.0807636079836284 5 5 + 16934717 16935442 16935038.545 16933011 16935797 + gene protein_coding_gene TRUE TRUE AT5G42310.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G22470.1); similar to CRP1 [Zea mays] (GB:AAC25599.1); similar to Os07g0548300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059927.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.217230414950217 -2.59471272620671 0.0256384035831909 1 2.64310601063914 19.9761847954123 -0.217230414950217 0.0434622059040658 AT5G04740_at 7.7659272249909 8.05784510879608 8.78580278324596 8.71118046110397 9.05849675986982 8.46919358295334 8.08240237330592 8.33623266675913 7.54563180813627 8.33782935923802 9.67603479493288 9.68274583913861 9.2889085647808 9.43104896727226 9.7808873005689 9.6056410372822 8.5244961745214 9.86735885051412 7.94368899395878 0.171706465194694 0.172724322068403 0.168581967342453 0.170750369962601 0.165215251907618 0.180093980759411 0.167108779020893 0.172345964587467 0.193522851594134 0.165152716162667 0.163225876476653 0.163225876476653 0.164556887388378 0.173480615367413 0.166629051731009 0.163759807658731 0.181328766819673 0.171736342055090 0.182147526283140 5 5|0 -|/ 1368723 1370360 1369341.286 1368543 1371481 - gene protein_coding_gene TRUE TRUE AT5G04740.1 ACT domain-containing protein similar to uridylyltransferase-related [Arabidopsis thaliana] (TAIR:AT1G16880.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58487.1); similar to Os08g0242700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061342.1); similar to Os12g0152700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066177.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) 0.283925310892762 2.59360187539746 0.0256884553893403 1 2.64139032788486 17.1206469092468 0.283925310892762 0.122672761166012 AT5G11280_at 8.13236536555898 8.4362638329166 8.74755937457022 8.81032990311469 8.59037548274915 8.7658967440668 7.39746267506384 7.9860830167856 7.925598960694 7.43339413329712 8.3411810315573 8.11497760535936 8.41160283291842 8.4154727657484 8.15671250969014 8.14761437707311 7.31910390053543 8.02767511969149 7.49876976054196 0.159856085462219 0.157826655216404 0.159643316962874 0.159671063177839 0.161696722685549 0.174688646444143 0.172540852687274 0.159779607496980 0.164183201694269 0.155228914629108 0.155236060627746 0.152378459306423 0.159518076265732 0.153975623275359 0.166832483816024 0.154476003514924 0.180442734180333 0.163967415288037 0.168549636486493 5 5|0 +|/ 3597364 3598226 3597850.4 3597248 3598522 + gene protein_coding_gene TRUE TRUE AT5G11280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80200.1); similar to Ankyrin [Medicago truncatula] (GB:ABE78998.1) -0.279925813675179 -2.59272668088617 0.0257279572007141 1 2.64003868164856 16.2263154506863 -0.279925813675179 0.119090787673747 AT5G56320_at 2.35897521524360 2.43711863723075 3.14711382189371 2.96090089341814 2.39613496877427 2.67811178054278 2.74031307919809 2.68761804850819 2.22705505262038 1.97340687885982 2.63930401225611 2.55268162783036 2.71434715575788 3.06674669779238 2.60286758933828 2.79345543926468 3.54114372019961 2.54510646255877 1.83640189403273 0.215052191814556 0.220463222280195 0.217226206235788 0.221684712040129 0.215617548397516 0.223872925078903 0.221291890208218 0.222215081632812 0.227186326963951 0.221739849299712 0.220080361624974 0.220674340838258 0.219101110070840 0.215003193490959 0.221862882110022 0.225454940651414 0.230891436756414 0.217249107624386 0.225369055908647 5 5|0 +|/ 22826457 22827107 22826767.3 22825867 22827463 + gene protein_coding_gene TRUE TRUE AT5G56320.1 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A14 precursor (AtEXPA14) (Alpha-expansin-14) (At-EXP14) (AtEx14) (Ath-ExpAlpha-1.5) (EXPA14) [Arabidopsis Thaliana] (GB:Q9FMA0;GB:Q0WLD1;GB:Q8L9W7); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to expansin [Pyrus communis] (GB:BAC67191.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) 0.227324707809255 2.59256976996770 0.0257350457027820 1 2.63979635579999 5.08540807058239 0.227324707809255 0.0607097213931474 AT5G12940_at 5.77456629517681 6.7767525601694 2.17153790529529 2.83103616432684 4.04155590581034 3.84089694157451 3.15229669237912 3.54659946966873 4.39304272954212 3.59344484303033 7.59658601263595 9.27694865158165 6.64993258641495 7.81094943215053 8.67553166907666 7.18293919771076 3.64006669794644 7.74757690273044 6.08102758598918 0.340746438941012 0.340746438941012 0.358492053100579 0.356472618270301 0.340746438941012 0.350261300821984 0.352034497777012 0.340959557713184 0.354813177851911 0.347497746745782 0.346578312484897 0.350612285262275 0.341991754283479 0.35657491842424 0.341845457658661 0.342451326902025 0.345197619863648 0.348946971771637 0.340746438941012 5 5 + 4088304 4088833 4088589.727 4087715 4089007 + gene protein_coding_gene TRUE TRUE AT5G12940.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G20820.1); similar to polygalacturonase inhibitor-like protein [Cicer arietinum] (GB:CAD56505.1); contains InterPro domain Rudiment single hybrid motif; (InterPro:IPR011054); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.407986895505477 -2.59038826576706 0.0258337960665307 1 2.63642755274535 10.0227742984509 -0.407986895505477 0.221283663754825 AT5G01480_at 1.26891058777169 1.41570695581599 1.62341862559713 1.46005131722025 1.73961131980171 1.56783348643840 1.6601848515751 1.49358587763123 1.43868965807631 1.92921022765517 2.15058396490906 2.32607901897540 2.57220061981683 2.36690702271269 2.09516923936414 2.39516584934634 2.26143589624608 1.85699608257037 1.66450969557385 0.194517193852278 0.200606853570761 0.196681721087235 0.209164479086077 0.203256461218501 0.201433151746149 0.194414841260464 0.199087707025579 0.197001045413031 0.196768926235351 0.201929712832728 0.203473976104148 0.200944936337940 0.208284333046860 0.206111154659257 0.198496460930398 0.210015450344569 0.212959744646695 0.205970997229965 5 5 + 193638 194201 193918.455 192989 194230 + gene protein_coding_gene TRUE TRUE AT5G01480.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G02610.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.224139373049695 2.58996348388530 0.025853068223519 1 2.63577162598059 3.4939314138203 0.224139373049695 0.0562097141066576 AT5G60430_at 4.60956691318855 3.98457155748777 6.11145350360491 4.98463450938093 6.45647298148396 5.14699527141612 3.82394266781625 2.47691799338799 3.18376619179474 3.89107167825944 4.79458577163307 4.99306222670377 4.12236810471836 4.7252599812295 4.2294531452793 5.20879911661058 4.96453918712195 4.77497550455024 3.98367331218887 0.381711215934467 0.381711215934467 0.381711215934467 0.398771175156662 0.381711215934467 0.417073682781615 0.411438127993052 0.395248190428468 0.381711215934467 0.381711215934467 0.381711215934467 0.407861774137503 0.445582765130716 0.381711215934467 0.422520414403223 0.422144473874631 0.42001211097611 0.396997606821039 0.381711215934467 5 0 / Inf -Inf NA 24318838 24320294 + gene protein_coding_gene TRUE FALSE AT5G60430.1|AT5G60430.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16650.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE80926.1); similar to Os01g0968000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045514.1); contains domain MULTIDRUG RESISTANCE PUMP (PTHR11206:SF1); contains domain MULTIDRUG RESISTANCE PUMP (PTHR11206) 0.658052839266962 2.5801291216415 0.0263032414049096 1 2.6205901159986 8.90571981162674 0.658052839266962 0.394228536099824 AT5G60850_at 7.6523520828685 7.88681697864023 8.55569474299174 8.86945792625775 9.80162552422425 9.25480669987055 8.40019544970547 8.6028454634335 8.03560445160129 7.8082821548383 9.53836676558483 9.08746219905562 9.6367981055785 9.22303923406376 8.68188213850892 9.18738949866924 9.19756323170276 8.89635823209843 7.99306762046915 0.140813441739242 0.145453265278510 0.139491890564283 0.145253393362974 0.149598767102160 0.145317849958717 0.142292728436027 0.142700812445296 0.150556583786539 0.160276446588182 0.139730709993638 0.141976115844141 0.137988495971449 0.150195986803104 0.140335339172478 0.137988495971449 0.146980996051781 0.146093655254433 0.148694957425758 5 5 + 24498139 24498700 24498424.455 24497675 24499099 + gene protein_coding_gene TRUE TRUE AT5G60850.1 OBP4 (OBF BINDING PROTEIN 4); DNA binding / transcription factor Encodes a zinc finger protein. Identical to Dof zinc finger protein DOF5.4 (AtDOF5.4) (OBF-binding protein 4) (DOF5.4) [Arabidopsis Thaliana] (GB:Q8LDR0;GB:Q9FJH1;GB:Q9XGU5); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37590.1); similar to Dof4 [Glycine max] (GB:ABI16005.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) 0.281100835327099 2.57877947754264 0.0263656232530933 1 2.61850728139714 17.1913537758127 0.281100835327099 0.121570005535447 AT5G54610_at 9.49068210356384 10.1065768957394 11.5379270496441 11.2651434195296 10.4522838227825 9.7611207381941 9.01405916171113 8.816146208595 9.46934296767057 8.00530011722566 9.36607293237356 8.72609416175606 9.51470760844711 9.8425649935178 7.45234866924645 9.73105451769245 9.60220070285436 10.2589109284054 8.32536398418353 0.183737955094228 0.176416755160143 0.190269060125919 0.183529712024486 0.186954247011944 0.186550079528241 0.180290600090603 0.181067435534034 0.18521046386492 0.185012997136900 0.188792063354761 0.189938501990719 0.176416755160143 0.192333113590337 0.199048457236699 0.176416755160143 0.182599098711644 0.185141285874114 0.188448682321600 5 5 - 22202021 22202535 22202268.909 22202005 22203751 - gene protein_coding_gene TRUE TRUE AT5G54610.1 ANK (ANKYRIN); protein binding Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54620.1); similar to Ankyrin [Medicago truncatula] (GB:ABE88815.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.338958991384436 2.57826164860654 0.0263895965663986 1 2.61770818477781 19.0113657602932 0.338958991384436 0.170492946301101 AT5G11090_at 7.11286483120533 7.72617667310316 8.66684566097797 8.9707147153705 9.18355495522204 8.58601295359658 7.75291842085469 7.7085997378377 7.07326349002473 6.47523225113124 7.78189147944284 7.89694639499573 7.99275447395794 8.10820430265098 7.75529266472207 8.6843668658553 7.84347907200536 7.8507170231763 6.63152129877404 0.206825028790274 0.197365132965244 0.223166709382824 0.219537096570568 0.205815285355630 0.222877425076535 0.204813226791337 0.198355974641254 0.217661364173309 0.205137897237008 0.199528672688611 0.205847511392285 0.204482724474750 0.214990813968738 0.206849964085271 0.197308477624244 0.219222816695024 0.208214997602832 0.224208062595923 5 5 + 3524905 3525407 3525138.273 3524681 3525847 + gene protein_coding_gene TRUE TRUE AT5G11090.1 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G25280.2); similar to unknown [Solanum tuberosum] (GB:ABA40431.1) 0.322318842144134 2.57536535427005 0.0265240802702621 1 2.61323914485426 15.5714004341431 0.322318842144134 0.157423482409124 AT5G49320_at 2.86831215956095 2.47367558189196 2.41427406008155 2.42830740256134 1.88272001080792 2.86244680429777 2.36490137969016 2.73735733647892 2.84288649656999 2.58227836139073 2.8041471110381 2.67640690676560 2.27773077025913 2.32451050624296 3.41530232556161 2.80671709097633 2.51258368409892 2.88683149990622 2.47161803925892 0.246573579789616 0.24982951222334 0.26051667510734 0.251394378701794 0.250046276220642 0.250818119226099 0.247092611169047 0.250398628511004 0.244080533802046 0.2439068132977 0.245638376030011 0.249300092627049 0.248501475007017 0.251655065711275 0.248552684691254 0.2439068132977 0.24557346943501 0.2439068132977 0.250641550951287 5 5|0 -|/ 20012388 20012968 20012672.1 20012251 20013540 - gene protein_coding_gene TRUE TRUE AT5G49320.1 similar to Os01g0253400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042612.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAA84605.1); contains InterPro domain Protein of unknown function DUF1218; (InterPro:IPR009606) -0.368520466981216 -2.57397527249955 0.0265888660594736 1 2.61109447928819 5.17664419321932 -0.368520466981216 0.193830725231416 AT5G09520_at 0.246574468343082 0.667878990067884 0.305896147652116 0.265963907829755 0.43847667372582 0.513178406203808 0.618589062632884 0.0141747501333383 0.947635104498486 1.18279171453976 0.391710662519098 0.144193658244173 0.413102251689528 0.380257206460181 0.383988489132773 0.591255539339734 0.354174955855566 0.0533794386615281 0.309024425638539 0.187125964100348 0.186598819444939 0.187327175241929 0.182804023455057 0.184590104182397 0.187347885043399 0.189465845567266 0.188267404182966 0.186716909818700 0.189688235651802 0.183675155326109 0.183332858931748 0.182237159879421 0.186511406707431 0.186125479811517 0.187900784255476 0.184452400197131 0.185187387089374 0.185047024966825 5 5 - 2958465 2958806 2958644.909 2958293 2958857 - gene protein_coding_gene TRUE TRUE AT5G09520.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G09530.1); similar to Os07g0599600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060191.1); similar to C protein immunoglobulin-A-binding beta antigen [Streptococcus agalactiae] (GB:AAL56262.1); similar to Os07g0599700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060192.1) -0.288011559526655 -2.57381769482774 0.0265962199341820 1 2.61085137370689 0.959920645888627 -0.288011559526655 0.128339501122895 AT5G10530_at 1.11243719249007 1.17913723155547 1.52161086336837 1.72577194326555 1.50732211347149 1.40147991673228 1.34192385882634 1.18965009132863 1.43337050670500 1.65155694739303 1.77751421386689 2.14054741465508 2.02616911385268 1.71699716329216 1.65191371406731 1.39528471683075 2.08773734084105 1.87826531228024 1.46397332602964 0.165648710454427 0.164503121435458 0.172171323753520 0.164503121435458 0.166669260606205 0.169172566018836 0.164503121435458 0.168834083450190 0.176318137668855 0.171534410164618 0.178845541553653 0.169863345460728 0.175759735367991 0.167313786997319 0.170485783000643 0.166488289648413 0.165715294529545 0.172349230572724 0.168547914346707 5 5 - 3324991 3325523 3325191.636 3324979 3326934 - gene protein_coding_gene TRUE TRUE AT5G10530.1 lectin protein kinase, putative similar to legume lectin family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G65600.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE89762.1); similar to 117M18_32 [Brassica rapa] (GB:AAZ66951.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.218424650966445 2.57297698887826 0.0266354881565907 1 2.60955439724259 3.04771859325644 0.218424650966445 0.0491062277347734 AT5G21105_at 5.7657394377731 6.19215125110004 6.10544213582827 6.4465639644202 6.59697247424036 6.80536527856834 5.96146379378815 6.45025707407792 6.07144642982659 5.37539455600494 8.22438698083644 8.1964554884874 7.93864276611935 8.06462749769451 8.5079070900046 8.14645006384227 7.76829311984135 7.89608677890536 5.99790639388948 0.237163205354461 0.202502766362654 0.210363780463614 0.208075005261811 0.204473375519799 0.220415928178337 0.206854511525660 0.206044275711502 0.230204183871055 0.230481579267385 0.209368513777233 0.215720396067689 0.21171742342515 0.214121798754228 0.212741100939901 0.208677043035550 0.220874527585663 0.221287534136199 0.232155457122053 5 5 + 7176845 7177385 7177073.636 7172752 7177844 + gene protein_coding_gene TRUE TRUE AT5G21105.1 L-ascorbate oxidase/ copper ion binding similar to L-ascorbate oxidase, putative [Arabidopsis thaliana] (TAIR:AT5G21100.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20933.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20931.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20932.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.291785143381535 2.57225882809582 0.0266690777839321 1 2.60844652302956 13.2443804344529 0.291785143381535 0.131855567631724 AT5G63890_at 7.63473855074953 7.72996522273258 8.32416079294993 8.3269317030065 8.35053051062665 7.73407850277038 8.2206048695947 7.95327906259753 7.50223074883978 7.8426796843633 8.60881176879064 9.1770758705467 8.20004378149403 8.46317749225834 8.97759417223212 8.48341703436422 7.82030681702307 8.49719066524694 7.32867282247006 0.161263146756826 0.153464401209820 0.158170179488124 0.164645455735507 0.163354561121829 0.167989352131323 0.158728552851100 0.163471582774863 0.167670862979640 0.161386224622208 0.15930733671359 0.163609906103586 0.171229778708526 0.174645374942934 0.163961315643770 0.154728815446359 0.171454197243772 0.165271998910582 0.164991001347557 5 0|5 /|- 25582907 25583345 25583075.889 25582657 25585432 - gene protein_coding_gene TRUE TRUE AT5G63890.1|AT5G63890.2 ATHDH (HISTIDINOL DEHYDROGENASE) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. Identical to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) (HDH) [Arabidopsis Thaliana] (GB:Q9C5U8;GB:Q8LA77;GB:Q9FN00); similar to Histidinol dehydrogenase, chloroplast precursor (HDH) (GB:P24226); similar to histidinol dehydrogenase [Thlaspi goesingense] (GB:AAC83459.1); similar to Os01g0232700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042506.1); contains InterPro domain Histidinol dehydrogenase; (InterPro:IPR001692)|Identical to Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) (HDH) [Arabidopsis Thaliana] (GB:Q9C5U8;GB:Q8LA77;GB:Q9FN00); similar to Histidinol dehydrogenase, chloroplast precursor (HDH) (GB:P24226); similar to histidinol dehydrogenase [Thlaspi goesingense] (GB:AAC83459.1); similar to Os01g0232700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042506.1); contains InterPro domain Histidinol dehydrogenase, prokaryotic; (InterPro:IPR012131); contains InterPro domain Histidinol dehydrogenase; (InterPro:IPR001692) -0.275923309165903 -2.57197383603744 0.0266824189430468 1 2.60800689118595 16.0774427946129 -0.275923309165903 0.117441780388959 AT5G55340_at 1.80747333811252 1.52259425601561 1.96275418274119 1.75458551788264 1.69126999570157 1.98573200629572 1.59988522567542 0.851005160040542 1.37084730521794 1.46522272715722 1.94997810673454 2.00168694707105 1.53255226969668 2.00448780202678 1.89149088565815 1.89812347630775 1.90820662473793 1.67233795590402 1.33993626897885 0.208706942196603 0.212403171202318 0.206437606191667 0.20582217988343 0.203463535012811 0.209359629619349 0.203463535012811 0.207556110211132 0.210115269028680 0.207300010715340 0.211615986272804 0.204385144139319 0.217092668761363 0.203905525662947 0.203723031999174 0.204284594921068 0.207046326706744 0.213894844592530 0.206136360528476 5 5 - 22457281 22457754 22457519.909 22457077 22458231 - gene protein_coding_gene TRUE TRUE AT5G55340.1 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55350.1); similar to wax synthase isoform 1 [Vitis vinifera] (GB:AAO18664.1) 0.315363291718222 2.57189266357406 0.0266862200251765 1 2.60788167496755 3.27159251479238 0.315363291718222 0.152053858995382 AT5G42670_at 5.58199451892188 5.74379801449175 6.69002247452299 6.53808144122175 7.00815917982903 6.90431176762133 6.27665678236151 6.52225672934796 5.2319972246031 5.43255165792956 6.06008367977233 6.71212248018445 6.64130874103873 6.28912398787345 6.43487872861527 6.78103110770399 6.51648437094832 5.67195252560612 5.86956106657736 0.207442078163213 0.213216985864906 0.213039167526549 0.224129900505607 0.205926364810218 0.208979068993140 0.216902832995513 0.209953372454909 0.219318686920607 0.211914097924405 0.207504250548924 0.205926364810218 0.208295374307441 0.218549465671792 0.219033299159197 0.208217783855443 0.229083127958638 0.208957804421205 0.215694602822736 5 5 + 17125941 17127431 17126729.455 17125490 17127983 + gene protein_coding_gene TRUE TRUE AT5G42670.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52070.1); similar to Os05g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054599.1); contains InterPro domain Agenet; (InterPro:IPR008395) -0.224902996595494 -2.57006376603451 0.0267720040608929 1 2.60506058090757 12.3580317064170 -0.224902996595494 0.0600402594804127 AT5G63800_at 11.3187261790252 11.3478325643025 12.4746663128833 12.379862301848 12.5074578152233 12.4495747818524 12.0367371043792 11.7736507014934 11.7256294123457 11.7911358146675 12.3939776151854 12.0673372859582 12.4573709038892 12.4264245662872 11.9873132322364 12.3176799901702 12.4959340220818 12.3407616807807 11.6061979192686 0.06971249379019 0.0647145847364936 0.0662665656211453 0.0687184496074511 0.0672169582851336 0.0685810653208625 0.0699944213488334 0.0652754982420323 0.071497147893081 0.0659686073883132 0.068039424156687 0.0665188637283845 0.0641465402724389 0.0692396853550942 0.0683349610057624 0.0655788254520915 0.070734485475514 0.069139087091761 0.0643497233270809 5 5|0 +|/ 25552032 25552869 25552508.667 25547281 25553075 + gene protein_coding_gene TRUE TRUE AT5G63800.1 BGAL6 (beta-galactosidase 6); beta-galactosidase member of Glycoside Hydrolase Family 35 similar to BGAL11 (beta-galactosidase 11), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G35010.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT1G77410.1); similar to BGAL13 (beta-galactosidase 13), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G16730.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79804.1); similar to beta-galactosidase [Gossypium hirsutum] (GB:AAS76480.1); similar to Galactose-binding like [Medicago truncatula] (GB:ABE79284.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.218494893268855 2.57001326478109 0.0267743766683234 1 2.60498268636879 24.0453156172097 0.218494893268855 0.0496759985572358 AT5G39785_at 3.11576850748557 3.9026667779499 4.27772263229591 4.56182398447343 3.96405195690736 3.60587430907454 3.1523299198909 2.75212357473955 2.24208417754073 2.54362236855346 2.76238257960670 3.7531564241322 3.10885462120688 2.87655489748718 2.67494850745198 3.87080110170891 3.07282401911575 3.36493642366508 2.32790751893797 0.166508491057225 0.171058957696961 0.170557970020834 0.169924793474911 0.167641957977470 0.167363550481894 0.171139350739371 0.168665384246173 0.177597465491727 0.169117346681352 0.169460606754354 0.165118576105797 0.168365325966767 0.167779003401064 0.170776558452664 0.165084707336877 0.173356575738351 0.173335865952523 0.173022991157684 5 5|0 +|/ 15946806 15949403 15948006.55 15946416 15949504 + gene protein_coding_gene TRUE TRUE AT5G39785.1|AT5G39785.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69610.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD32213.1); contains InterPro domain Protein of unknown function DUF1666; (InterPro:IPR012870) 0.339831370802775 2.56998699450865 0.0267756109582272 1 2.60494216645858 6.44492621292259 0.339831370802775 0.172046174938908 AT5G48120_at 6.44889851097811 6.5649500352704 7.92461084659295 7.78349143307823 8.34536421394878 7.93854510975818 6.0663077170124 6.4185667494974 5.45052923462195 5.43478724280846 6.18077924298954 6.22763103364904 7.06075423143628 6.12714519076728 6.05859312789304 7.13472427256684 6.6403953037117 6.46700977910266 5.63454100485593 0.232351794045166 0.232490325404186 0.234040221113219 0.234456628438636 0.232351794045166 0.239568671778272 0.232351794045166 0.237249806900609 0.244977272133297 0.235082414428423 0.236457206838659 0.232351794045166 0.232351794045166 0.240204586958238 0.233051902977219 0.232351794045166 0.248285777378358 0.232829769699734 0.236001512949519 5 5|0 -|/ 19525445 19526909 19526296.625 19525140 19532077 - gene protein_coding_gene TRUE TRUE AT5G48120.1 binding similar to hypothetical protein MtrDRAFT_AC123570g3v1 [Medicago truncatula] (GB:ABE84590.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.256227814923382 2.56851040626522 0.0268450777539973 1 2.60266473890603 13.1832159187804 0.256227814923382 0.0983478735978055 AT5G49120_at 1.38000755294496 1.33589564020049 1.48740204238167 1.7313959693235 1.92508795417062 1.55015976987646 1.48339323772962 1.37820432599567 2.04908690353576 1.37606355062536 2.05560712297483 2.12857189217975 2.09293586074579 1.64125390255528 1.99958945880971 1.89085270467385 2.16681230508743 1.85283068341481 1.18990400414883 0.216179062715746 0.214574819148919 0.214574819148919 0.217893213464592 0.215620500920184 0.222967442958433 0.217700285655633 0.220903021368675 0.232803037733720 0.223811788211373 0.223013539975133 0.225180674813885 0.220501095603365 0.214574819148919 0.224765230300962 0.214574819148919 0.221994000415190 0.219929763006633 0.217341417813087 5 5 - 19926026 19926431 19926264.273 19925854 19926625 - gene protein_coding_gene TRUE TRUE AT5G49120.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G78020.1); similar to Os02g0592800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047297.1); similar to hypothetical protein LOC_Os11g43790 [Oryza sativa (japonica cultivar-group)] (GB:ABA95187.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 0.23950545932336 2.56661927603799 0.026934306678404 1 2.59974822223050 3.29239742528213 0.23950545932336 0.079889565691428 AT5G13950_at 8.54805775985167 8.63295331525703 9.218664404395 9.10758188892502 9.63978053620813 9.23253715300608 8.64204350368261 8.61167038383233 8.8785866775444 8.6519665950811 9.46538927694856 9.37821784442863 9.29372691984054 9.34283337469712 8.96557218135737 9.33371637640593 8.93494496014058 8.93225162588046 8.91094346261332 0.115169731262722 0.114459690218842 0.117827239560807 0.115023909608913 0.113093827462126 0.120826659469090 0.115749971702743 0.118354246028670 0.131346311759969 0.126717354415223 0.116129741647518 0.113016461190167 0.116343297103278 0.122956625287943 0.121965144969891 0.114110415145173 0.123081892317991 0.120216209315278 0.119980108418015 5 5 - 4496237 4496773 4496509.909 4495973 4500683 - gene protein_coding_gene TRUE TRUE AT5G13950.1|AT5G13950.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45830.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84162.1); contains domain NFRKB-RELATED (PTHR13052); contains domain NFRKB (PTHR13052:SF1) -0.23528590685185 -2.56650920630115 0.0269395090856075 1 2.59957848159621 17.9639930256657 -0.23528590685185 0.074697954666353 AT5G41060_at 1.77591558609807 1.7168006305913 1.51824997110835 1.64813665316978 2.27035878065222 2.22997077898861 2.49823371492682 2.42941217361835 2.48254065785366 2.30313639443830 3.69120094407934 4.9172761204868 3.19535287959063 2.97540001106237 4.59228205884467 2.92632303435632 3.04416072559911 3.65061551475377 2.56119994830458 0.238002313287499 0.237711424331789 0.237665651071089 0.237868537703223 0.235285935095310 0.244749134686478 0.243213271694232 0.235492457544588 0.242680020801858 0.238581269110121 0.235285935095310 0.2370932793137 0.235476255356759 0.24460436393037 0.245837531608488 0.235285935095310 0.235285935095310 0.236017694734664 0.235963549751533 5 5 + 16454132 16454692 16454310.273 16452596 16454927 + gene protein_coding_gene TRUE TRUE AT5G41060.1|AT5G41060.2 zinc finger (DHHC type) family protein|zinc ion binding similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G26935.1); similar to Os09g0508300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063622.1); similar to Os08g0535400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062355.1); similar to P0482D04.5 [Oryza sativa (japonica cultivar-group)] (GB:BAB89658.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594)|similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G26935.1); similar to Os01g0925300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045255.1); similar to Os09g0508300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063622.1); similar to P0482D04.5 [Oryza sativa (japonica cultivar-group)] (GB:BAB89658.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 0.208458467810506 2.5664019461157 0.0269445796541931 1 2.59941307466657 5.04740249179192 0.208458467810506 0.0282946880473413 AT5G55860_at 6.42816049789204 6.63348310544105 6.29342959647956 6.69752051881984 7.02023732957512 6.28537958242317 5.77984353305507 5.25441581739883 5.65340581418183 5.83645289180683 7.07018523482577 6.68438480693898 7.01252477137312 6.86261877990938 6.16722477960923 6.47089894622157 6.59565600468293 6.76924031214852 6.06528584873663 0.204941649574173 0.201727823361899 0.199148902088021 0.196323410126211 0.199061704464155 0.208040799333034 0.194841822261927 0.198099442097413 0.210946853726236 0.194252553505754 0.192421169716715 0.202075993374465 0.191895956729827 0.196609091280807 0.200681197610736 0.191895956729827 0.196741211586691 0.200486743351322 0.200190429330513 5 5 + 22628816 22629356 22629070.273 22626758 22629619 + gene protein_coding_gene TRUE TRUE AT5G55860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12150.1); similar to Prefoldin [Medicago truncatula] (GB:ABE89308.1); contains InterPro domain Protein of unknown function DUF827, plant; (InterPro:IPR008545) -0.342903942610501 -2.56582557390725 0.0269718429382251 1 2.59852426335155 12.5769620256550 -0.342903942610501 0.174908279204785 AT5G27110_at 2.08315953421461 2.58753930524258 2.79485846589524 2.48967874313694 2.77605946916482 2.51103694429619 2.70528332960523 2.37536534287221 2.14759846779334 2.69143705586897 1.97225177641843 2.44536733655906 2.26037818483541 1.71264798198706 1.88250116049137 2.35964400618794 2.31306878595835 1.99544141474876 2.31681508052425 0.201238727428165 0.195725524622086 0.190030397303826 0.191435548254555 0.193726822884240 0.195161843047495 0.196696748179114 0.195216489221186 0.192230500113676 0.192364912408853 0.191472873955731 0.196537240508010 0.192859586286595 0.196827215180198 0.191794561431254 0.193145379840084 0.204543082806409 0.190936343908517 0.190030397303826 5 5 - 9538592 9539094 9538834.818 9538575 9540650 - gene protein_coding_gene TRUE TRUE AT5G27110.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.283935144829903 -2.56463194241313 0.0270283901027004 1 2.59668368434373 4.79184569961705 -0.283935144829903 0.125582901139649 AT5G11720_at 7.83518230957524 7.97252175098203 8.49430909895244 8.47369477515584 8.85128333709957 8.40043344448632 7.70945750275327 7.77100705686841 7.97248310206601 7.8089765390812 8.35522568467327 8.4934810963592 8.35781068562965 8.42066018410056 8.3620235522966 8.60746782711905 8.25013776609077 8.48679227104483 7.76784092633924 0.120119570045210 0.115122039809866 0.124532817256348 0.112601115207229 0.115906846260562 0.122264364029543 0.117730105188377 0.119120797852261 0.117830420699875 0.112390045527194 0.110850445466037 0.107767892095830 0.110196952870441 0.118343053892266 0.113631526429204 0.107767892095830 0.127083015110702 0.115885850446564 0.111072968685521 5 5 + 3779383 3779897 3779619.545 3776815 3780129 + gene protein_coding_gene TRUE TRUE AT5G11720.1 alpha-glucosidase 1 (AGLU1) similar to alpha-xylosidase, putative [Arabidopsis thaliana] (TAIR:AT3G45940.1); similar to ATXYL1/XYL1 (ALPHA-XYLOSIDASE 1), alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] (TAIR:AT1G68560.1); similar to Alpha-glucosidase precursor (Maltase) (GB:O04893); similar to Alpha-glucosidase precursor (Maltase) (GB:O04931); similar to high pI alpha-glucosidase [Hordeum vulgare] (GB:AAF76254.1); contains InterPro domain Glycoside hydrolase, family 31; (InterPro:IPR000322) -0.241342488605939 -2.56435074041512 0.0270417287953961 1 2.59625008967405 16.3217195291057 -0.241342488605939 0.082331298894436 AT5G40170_at 9.62068614095954 9.93563771419294 10.7237903454728 10.8361811742926 10.9327826286439 10.6525535623905 9.61583060634813 9.5372976271694 9.31311240642323 9.54428746936835 10.0606350707038 10.2204888400807 10.2102619976663 10.3249165391299 9.72946057809821 10.2722669633689 10.1102749078492 10.1628907782822 9.46987901354094 0.103481943137367 0.101054864599106 0.107568565346904 0.103763358575921 0.105736760125182 0.109418939505126 0.103816302708888 0.104412736686575 0.113215831750009 0.105637241551239 0.110766021815959 0.101054864599106 0.101054864599106 0.102696949713434 0.108551385448328 0.104265506167092 0.109000813124918 0.106453340752505 0.108217736472093 5 5 - 16082433 16082982 16082662.545 16082319 16084802 - gene protein_coding_gene TRUE TRUE AT5G40170.1 disease resistance family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33060.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G33050.1); similar to putative kinase [Brassica napus] (GB:ABI99471.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.236626549521214 2.56357109927765 0.0270787447004838 1 2.59504797244430 20.0212578528545 0.236626549521214 0.0767165105441132 AT5G01850_at 6.77744765042327 6.86411400385043 6.56905845114953 7.18841884881765 5.27462992554523 5.37788886328749 3.78120892755726 4.36484760697804 3.30882968262855 3.4437596260928 3.52703776413941 3.73687183995993 3.50129862153169 3.86824895350631 3.46825728814958 3.96466062036445 3.50871134602809 4.05453890186274 2.97699383805236 0.236267014920771 0.23647810747156 0.246283538041661 0.240709753070476 0.239423383702174 0.237881137009037 0.231125697959205 0.238690835147753 0.233707451766642 0.241453760551583 0.233605669682661 0.231125697959205 0.243678598334045 0.249250127781581 0.235156723654006 0.233514610632020 0.248323371918713 0.232930071249769 0.231125697959205 5 0|5 /|+ 333456 334055 333780.111 332334 334467 + gene protein_coding_gene TRUE TRUE AT5G01850.1 protein kinase, putative similar to ATN1, kinase/ protein threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT3G27560.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06441.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.310738996670597 -2.56290715014711 0.0271103071709615 1 2.59402428226912 9.24815055930145 -0.310738996670597 0.149109955466578 AT5G44785_at 5.44649607916146 5.83953990890357 5.57358917223543 5.40844691154978 6.55813292725168 5.93875669988644 5.90254507060547 5.70917649012719 4.10862564686333 5.44012302935873 5.53472296631979 6.65172245089567 5.56354051799856 5.79698253732087 7.0564520955292 7.12022295708374 6.7654607701518 4.99109695391756 5.19717866745713 0.228193926961271 0.222090221786162 0.248279301927549 0.235546850525258 0.226153668420296 0.243674366906541 0.228265657543101 0.227130065161039 0.24232332589331 0.22639534460786 0.222090221786162 0.225547390912445 0.225349221674535 0.236360532516381 0.231162618944833 0.227734758056747 0.224272183794362 0.230331297550411 0.222909554989619 5 5 - 18088140 18088993 18088503.364 18087908 18090356 - gene protein_coding_gene TRUE TRUE AT5G44785.1|AT5G44785.2 single-stranded DNA binding similar to PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9), single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G20010.1); similar to mitochondrial SBP40 [Solanum tuberosum] (GB:AAX34397.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Single-stranded DNA binding; (InterPro:IPR010913); contains InterPro domain Single-strand binding protein/Primosomal replication protein n; (InterPro:IPR000424) -0.292867231918135 -2.55690693559359 0.0273971929424358 1 2.58477484890129 11.3472525428211 -0.292867231918135 0.134357052861538 AT5G01810_at 5.19443664847476 5.37779604030969 6.00709088808297 6.28773309903566 6.6140109004321 6.9079184402241 7.45808512807096 7.75141157091255 7.90248762275409 7.71015495784457 9.74567173544933 9.77781042049423 9.5955417728316 9.62606787153716 8.79282117663795 9.8040859689435 7.9745384481375 8.92811142797666 7.8604807275831 0.229852537587108 0.219328372222452 0.219534072058926 0.209726745631036 0.207221198544957 0.212970651696442 0.212730697221315 0.206523030989275 0.213221991978454 0.203087312778858 0.20656759001162 0.212079821992226 0.20694723547464 0.214084569673662 0.203087312778858 0.211707292503284 0.208424932796436 0.207490447138505 0.203087312778858 5 5 + 311132 311697 311435.545 309431 312094 + gene protein_coding_gene TRUE TRUE AT5G01810.1|AT5G01810.2 CIPK15 (CBL-INTERACTING PROTEIN KINASE 15); kinase/ protein kinase|CIPK15 (CBL-INTERACTING PROTEIN KINASE 15); kinase Encodes a CBL-interacting serine/threonine protein kinase, also has similarities to SOS2 kinase. Identical to CBL-interacting serine/threonine-protein kinase 15 (EC 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) (CIPK15) [Arabidopsis Thaliana] (GB:P92937;GB:Q9LZW5); similar to CIPK2 (CBL-INTERACTING PROTEIN KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07070.1); similar to CBL-interacting protein kinase 22 [Populus trichocarpa] (GB:ABJ91228.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.249421995385775 -2.55640559467267 0.0274212984305417 1 2.58400217266724 15.0022881088486 -0.249421995385775 0.092353935257961 AT5G03520_at 9.74913921449105 9.87196176371445 10.7182413840600 10.7137952202109 10.9993598198736 10.7776364911483 10.1834878934369 10.2327933923708 10.0986598111271 9.889738777158 11.2722751030169 10.7974090665775 10.8045732739861 10.9058083066831 10.9356213848424 10.6425312167126 10.6626355367607 10.9707895065141 9.9516241221934 0.096658609199372 0.096028710075991 0.0943383142939357 0.0950687007500286 0.0948019055057758 0.0971505475004645 0.0939496640535285 0.0954923858748408 0.112264834599552 0.0966126634934642 0.09343219348778 0.0919450574125195 0.0938971363572 0.0920156792473527 0.0981529142882635 0.094437046192312 0.101506732770922 0.0933954020732574 0.101549178611624 5 0|5 /|+ 884005 885133 884643.286 883446 885422 + gene protein_coding_gene TRUE TRUE AT5G03520.1|AT5G03520.2 AtRABE1d/AtRab8C; GTP binding similar to AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09900.1); similar to small GTP-binding protein [Pisum sativum] (GB:CAA90082.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753)|similar to AtRABE1e/AtRab8E (Arabidopsis Rab GTPase homolog E1e), GTP binding [Arabidopsis thaliana] (TAIR:AT3G09900.1); similar to ethylene-responsive small GTP-binding protein [Lycopersicon esculentum] (GB:AAD46405.1); contains InterPro domain GTP-binding nuclear protein Ran; (InterPro:IPR002041); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras small GTPase, Ras type; (InterPro:IPR003577); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.214468374834011 2.55425960694392 0.0275247184274687 1 2.58069499798364 20.8327833946863 0.214468374834011 0.0446928247851442 AT5G03960_at 1.26287459007751 0.846250322579682 1.34909411205887 2.39513219932920 1.5710546274742 1.33150089645064 1.49185084857178 1.21055569473919 1.47009228796352 1.81834967497868 2.59582962257362 2.9125566932043 1.67566962451679 2.54354814189199 2.60866507689895 2.34241439361115 1.26779583635208 1.86674093191408 1.73431883188154 0.267692092667457 0.281798395543694 0.274056360236112 0.268519521950654 0.269344184688080 0.264528545945015 0.260390546808185 0.273639482881666 0.263560274329733 0.275301749668385 0.268686295634645 0.270224789554473 0.272529074335445 0.260390546808185 0.260390546808185 0.260390546808185 0.274140777288059 0.274198332090116 0.260390546808185 5 5 - 1068390 1068893 1068642.571 1068275 1069977 - gene protein_coding_gene TRUE TRUE AT5G03960.1 IQD12 (IQ-domain 12); calmodulin binding similar to IQD11 (IQ-domain 11), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G13460.1); similar to IQ calmodulin-binding re (GB:ABE86306.1); similar to Os03g0355700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050136.1); similar to Os01g0833800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044716.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.380091955570194 2.55137381341559 0.0276643977885379 1 2.57624838640915 3.38274223060761 0.380091955570194 0.205074114904672 AT5G40050_at 0.91344236914304 1.21874488826382 0.462688067312226 0.942181841917821 1.01905848353416 0.886751032248496 1.03738688546195 0.839197032187813 0.886901483310832 1.77844897414252 0.914939927423154 0.895753356413454 1.10097717445133 1.46226204367829 1.10908474880851 1.31865505212239 1.37198834816674 1.29151014393577 1.5040905452321 0.184980469934205 0.188832252958496 0.198865655633512 0.185159443312322 0.190811518809844 0.186263488599326 0.196099670512883 0.189807916876713 0.193427011072539 0.192616086070755 0.187275476903071 0.184980469934205 0.186461401352380 0.195039780120153 0.184980469934205 0.188615569203265 0.200468005521843 0.184980469934205 0.184980469934205 5 5 - 16049329 16050022 16049754.727 16049311 16050779 - gene protein_coding_gene TRUE TRUE AT5G40050.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G25860.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE92031.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.262550300754508 -2.55057699532424 0.0277030886474919 1 2.5750207364625 2.20141133347705 -0.262550300754508 0.106665199268624 AT5G59305_at 1.97396111260294 1.95119751462384 2.12825787698802 1.95057287694949 1.70634175616735 1.87478457543901 1.75473577402209 1.95851556949503 2.27179572860756 2.2411112933098 2.21681984984405 2.10940451021872 2.02844487089613 2.06217949952014 2.01566014910366 1.81465029140823 2.27853656347725 2.33891689288591 2.10140009372717 0.175290100658259 0.170127760699618 0.174553215621155 0.171691558511001 0.173036619006423 0.176924078309916 0.176542438471604 0.176015859415782 0.177823533698182 0.170127760699618 0.173184166877859 0.179500960322442 0.179346225446911 0.170127760699618 0.174004755950278 0.178530793360646 0.176543299877347 0.170127760699618 0.179098990691720 5 5|0 +|/ 23940467 23940866 23940665.667 23940427 23941136 + gene protein_coding_gene TRUE TRUE AT5G59305.1 unknown protein -0.220104065037744 -2.55011232129061 0.0277256763014925 1 2.57430484521132 4.06871869051969 -0.220104065037744 0.0552663362902222 AT5G63740_at 1.72945771732630 1.99212065993241 2.10782074460709 2.24923761754449 1.42855428585575 1.61150158926524 1.61553686553906 1.54466801257558 2.04465804894434 2.34377532388447 1.62950977480756 1.32045549925709 1.97380097728625 1.62110487362579 1.87565605574109 1.73280428644052 1.86785150013542 2.06430871168106 1.74994321063380 0.177619354475788 0.177619354475788 0.177983148068828 0.186667201675160 0.189920535101574 0.186983345744497 0.188965099655351 0.177619354475788 0.190769417056127 0.180302235116204 0.187449348653235 0.179232183233795 0.189961098781512 0.183161712360617 0.180974436118226 0.188236112278015 0.188674498228282 0.191988422007423 0.181585142922411 5 5 - 25528016 25528546 25528217.818 25528002 25528682 - gene protein_coding_gene TRUE TRUE AT5G63740.1 zinc finger protein-related similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63760.2); similar to aspartic acid-rich protein aspolin2-1 [Cyprinus carpio] (GB:BAD42843.1); similar to aspartic acid-rich protein aspolin2-2 [Cyprinus carpio] (GB:BAD42844.1); contains InterPro domain Aspartate carbamoyltransferase, regulatory chain, C-terminal; (InterPro:IPR011069) -0.224262959489057 -2.54938079314991 0.0277612724326812 1 2.57317787144447 3.6882681804271 -0.224262959489057 0.0617886735849989 AT5G46470_at 5.09993153103878 4.78651996830382 6.80903610601329 6.54056139386181 6.8245809011197 6.0978997624036 6.17056498570663 5.32581931891028 5.02027242817157 4.86849346167095 6.66365947054786 6.4686261337095 6.7566393203196 6.63946859732625 6.18906813992487 6.92027681385764 6.48361225878258 6.3159136271645 5.05164928610051 0.179353968748093 0.176280713868556 0.179147037861248 0.179598065449567 0.175029226629829 0.18081289308251 0.173437008109232 0.178454045896142 0.187243049184357 0.179437924955887 0.172443834377211 0.173447134601042 0.175667629813033 0.187396439181142 0.174972391876559 0.172268853769603 0.18520679757964 0.178869061208382 0.176553712673752 5 5 + 18863442 18866785 18864968.05 18859928 18866968 + gene protein_coding_gene TRUE TRUE AT5G46470.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.380345635327904 2.5480889651605 0.027824242762295 1 2.57118783730744 11.7242624645123 0.380345635327904 0.205634253040693 AT5G35080_at 7.06129707534396 6.94179444485154 8.24604377381452 8.08428468569618 7.9230129394521 7.46518235212103 5.51231742931173 6.08168281801406 5.57900790085577 4.63809071182686 6.74501374632545 6.32048461657867 5.97645998127644 6.69241065465115 6.36663960390763 6.3526198039806 5.50059630891339 5.73810022226583 5.00530483365058 0.264868430625758 0.254323936262650 0.270895072441850 0.266336522386362 0.256625752830647 0.284259303280682 0.2612406088262 0.261251627895842 0.265279369499283 0.258834470200164 0.257385102602096 0.265896544468080 0.261357942870436 0.254323936262650 0.259769426211335 0.254323936262650 0.289243544920926 0.259129302541104 0.254323936262650 5 5|0 -|/ 13371862 13372642 13372299.125 13371503 13374047 - gene protein_coding_gene TRUE TRUE AT5G35080.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD37440.1); contains InterPro domain Mannose-6-phosphate receptor, binding; (InterPro:IPR009011); contains InterPro domain Glucosidase II beta subunit-like; (InterPro:IPR012913) 0.287898251088057 2.54506258040805 0.0279723159341387 1 2.56652637484740 12.8072894894999 0.287898251088057 0.131137608119046 AT5G55250_at 1.84727625907014 1.28969434313560 2.55700837566619 2.49786422917079 2.77662951632166 2.59246664059237 2.77902633203949 3.09538156411813 2.16779178204200 3.06355048461763 2.69118411195970 3.18070631233551 3.35083851889473 3.57612274970708 3.39830631611961 3.85067377780323 4.00263226285263 2.67701691965871 2.26342655685102 0.228721626299836 0.222904209136306 0.222840335962908 0.221293875894696 0.21989567426053 0.231344683429852 0.224446589348603 0.224268017475559 0.233127136806832 0.225204027843007 0.226144661535089 0.227822150007084 0.223489573090802 0.233722037701947 0.224848035843135 0.227308233253354 0.231720298088875 0.242298047842426 0.223354573449636 5 5|0 -|/ 22424836 22426706 22425801.3 22424699 22428170 - gene protein_coding_gene TRUE TRUE AT5G55250.1|AT5G55250.2 IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1); S-adenosylmethionine-dependent methyltransferase|IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1) Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. similar to GAMT2, S-adenosylmethionine-dependent methyltransferase/ gibberellin carboxyl-O-methyltransferase [Arabidopsis thaliana] (TAIR:AT5G56300.1); similar to OSJNBa0087O24.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE03582.1); similar to H1005F08.6 [Oryza sativa (indica cultivar-group)] (GB:CAH65977.1); similar to Os04g0665200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054175.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.271119630016486 2.54244865059186 0.0281008334423952 1 2.56250091085967 5.34901410534927 0.271119630016486 0.115881028902812 AT5G66780_at 1.30538737579991 1.65890995267673 1.13737462102393 1.22247519844177 1.32299100755965 1.12283190617100 0.9653999178123 1.04563603266624 1.48852393730980 1.57248448297733 1.03248080678443 1.15182129930608 1.22687040284646 1.21392187853494 1.37372106542388 1.1500638481525 1.18886347795766 1.73483687917015 1.46038543403138 0.169325143357039 0.176906204755330 0.177400156896313 0.170521049468851 0.174918416178925 0.173159522004191 0.178131517118704 0.177140990372860 0.175827215770498 0.174278916848208 0.171804498664374 0.173725773987611 0.178005980816335 0.171528380852482 0.173799889678738 0.170391204041981 0.186111258235004 0.172478141371748 0.183067581226301 5 5|0 +|/ 26680855 26681394 26680998.625 26680799 26681629 + gene protein_coding_gene TRUE TRUE AT5G66780.1 similar to unknown [Ammopiptanthus mongolicus] (GB:AAW33981.1) -0.231674071286292 -2.54013797393537 0.0282149253211226 1 2.55894300650944 2.60572762254137 -0.231674071286292 0.0731597306642347 AT5G46140_at 1.69705012276661 1.45416220239311 2.67465604415881 2.57789869218969 2.53315881555879 1.99322403161878 1.98020435415691 1.51767546677217 1.67100159862144 2.10918363162220 2.21654120123797 1.53142917425351 1.74603214016294 1.77680302616730 1.92110587631635 2.17659047762901 2.24125836809284 2.41461416436360 1.84617943046901 0.205784411627127 0.207108833786483 0.206550956030827 0.207464005464733 0.20222900146381 0.205662916476705 0.20222900146381 0.208880336974804 0.214721011703148 0.208725016984266 0.209796261746658 0.205364904453349 0.211327108523073 0.211728121095758 0.208610617514541 0.20222900146381 0.209216990385813 0.213702268270148 0.208757658907493 5 5 - 18722381 18722963 18722651.091 18722241 18723935 - gene protein_coding_gene TRUE TRUE AT5G46140.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46130.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) 0.286903945172568 2.53673695985214 0.0283836840548396 1 2.55370718030630 3.99275456141794 0.286903945172568 0.131090372179043 AT5G65860_at 5.62512314872091 5.87724172299354 6.3343627867268 6.6008908825804 6.78518352142902 6.90746221555256 6.06062509914225 6.38396416967337 4.17785316431828 4.62289798353335 6.26350576904519 7.11764529892634 6.11397545236647 6.66294440620259 6.9207603202056 6.62974495997248 6.25296357645417 6.06630446839833 5.11209573479649 0.178358267917025 0.175235337520380 0.183728713073579 0.179257903702629 0.181684447659147 0.183165609714015 0.178724484055783 0.178194876600098 0.18735976497802 0.189833128081494 0.179940346804517 0.175877186641611 0.183363876782236 0.182351242639501 0.191774810059459 0.178199706278992 0.178663173672059 0.183962281052674 0.180742679015382 5 5 - 26364937 26365438 26365214.091 26364819 26366282 - gene protein_coding_gene TRUE TRUE AT5G65860.1|AT5G65860.2 ankyrin repeat family protein|protein binding similar to ankyrin repeat family protein / methyltransferase-related [Musa acuminata] (GB:ABF70003.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.24282486013062 2.53551032490613 0.0284447934021841 1 2.55181906622482 11.8924047728502 0.24282486013062 0.0872341825714731 AT5G18280_at 3.95870829123201 3.52668993757566 3.85889708715771 4.10005002489406 3.59857166644217 4.20230118318342 3.62096340875884 3.99266370123593 3.91425839166707 3.14764553284628 5.90537525686152 5.84356430130635 5.63764335449758 5.60164965116838 6.03239039390138 4.81526895867272 5.5325659018182 4.39366391272518 3.3266202011595 0.20715962610457 0.201199562224730 0.202230120464397 0.208102455916641 0.205428879486348 0.206217523592744 0.201199562224730 0.209428112718346 0.207265923213265 0.218180951743741 0.201199562224730 0.201199562224730 0.213186158825101 0.203282934099838 0.207409590871987 0.204937191936028 0.212819781307909 0.204451235870414 0.203383325196886 5 5|0 -|/ 6050826 6051869 6051354.4 6050516 6054343 - gene protein_coding_gene TRUE TRUE AT5G18280.1 ATAPY2 (APYRASE 2) Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. similar to ATAPY1 (APYRASE 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G04080.1); similar to PsAPY2 [Pisum sativum] (GB:BAB85978.1); similar to apyrase [Vigna unguiculata subsp. unguiculata] (GB:BAD80837.1); similar to apyrase-like protein [Medicago truncatula] (GB:AAO23007.1); contains InterPro domain Nucleoside phosphatase GDA1/CD39; (InterPro:IPR000407) 0.307488139134399 2.53119657801516 0.0286607291439062 1 2.54518025436976 8.32390895835657 0.307488139134399 0.14961424261664 AT5G23750_at 6.64967644869595 6.64625168612134 8.30796416483778 8.57388814308788 8.48560987509579 8.47128379907014 9.22675781881172 9.0929603002206 7.46409245003968 7.93566728350558 8.94123820082208 7.94095643440045 8.93845777130105 8.46670770318442 7.56605683323959 8.90153378791782 9.19987997854948 8.56487695707592 7.92650201880146 0.181648001580582 0.169710383862278 0.169633418522309 0.166978993351759 0.162836149673659 0.164166665523914 0.165010871921041 0.169932702299143 0.176464971941306 0.162330562671708 0.158425890555599 0.164711387447301 0.15993322187916 0.164481633614798 0.168440626697490 0.158425890555599 0.170152308454279 0.163471461843808 0.161343988857699 5 5|0 -|/ 8010022 8011403 8010891.5 8009809 8011622 - gene protein_coding_gene TRUE TRUE AT5G23750.1|AT5G23750.2 remorin family protein similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT3G48940.1); similar to Remorin (pp34) (GB:P93788); contains InterPro domain Remorin, N-terminal region; (InterPro:IPR005518); contains InterPro domain Remorin, C-terminal region; (InterPro:IPR005516) -0.216158981161822 -2.52982079417274 0.0287299363385343 1 2.54306332645413 16.3519910507061 -0.216158981161822 0.0515790880360126 AT5G05780_at 9.24767296272594 9.45217574260475 10.1600693552856 10.2817494527311 10.2760248961943 9.91752496787194 9.6456073702988 9.3834937167278 8.82076228239277 8.57031752575891 10.1491877635986 10.0750115222831 9.6456804452275 9.75965702348474 10.2090600681432 9.91780934707481 9.79449817503617 9.52552834148742 8.72079832470366 0.101697146764436 0.103394901654473 0.101745608806110 0.100557258873798 0.100557258873798 0.105244078907892 0.100557258873798 0.103766000765843 0.125885204073989 0.110954585471075 0.101835673263262 0.102730049236877 0.108017243245000 0.106512110117157 0.108164201760374 0.10214250491324 0.112045517794383 0.112557921572304 0.108760912539005 5 0|5 /|+ 1736943 1738141 1737717 1735731 1738493 + gene protein_coding_gene TRUE TRUE AT5G05780.1 ATHMOV34 (ASYMMETRIC LEAVES ENHANCER3) Encodes a 26S proteasome subunit. Identical to Probable 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (MOV34 protein) (RPN8) [Arabidopsis Thaliana] (GB:O24412); similar to MEE34 (maternal effect embryo arrest 34) [Arabidopsis thaliana] (TAIR:AT3G11270.1); similar to 26S proteasome regulatory particle non-ATPase subunit8 [Oryza sativa (japonica cultivar-group)] (GB:BAB78487.1); contains InterPro domain Mov34/MPN/PAD-1; (InterPro:IPR000555); contains InterPro domain Mov34-1; (InterPro:IPR003639) 0.242224102732769 2.52962466064694 0.0287398159921170 1 2.54276154988837 19.0897965397602 0.242224102732769 0.0871915962226588 AT5G06110_at 6.11178001161532 6.55353070108665 6.74223621191512 7.3107682830205 6.79926026373816 6.59582635347964 5.42204612083597 5.91934860462626 5.70239278672245 5.50736642474054 6.14294180729528 6.58834715452264 6.07169482328217 6.48057046798676 6.63139967830778 6.28654182944447 6.1839348675656 6.28715785023079 6.00283995054907 0.209553048849237 0.208858379509688 0.20920305206356 0.211720039330987 0.206294982027027 0.217241410158503 0.226311568217074 0.206713637777193 0.213298601984722 0.212371161271488 0.218438884566635 0.213527535321773 0.206056182960849 0.206487181366409 0.206056182960849 0.206056182960849 0.207994577237229 0.210438104727975 0.210617311678352 5 5 - 1841019 1841585 1841259.091 1840831 1843001 - gene protein_coding_gene TRUE TRUE AT5G06110.1 DNAJ heat shock N-terminal domain-containing protein / cell division protein-related similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to gonidia forming protein GlsA [Lilium lon (GB:BAC77346.1); similar to DnaJ domain, putative [Medicago truncatula] (GB:ABE90980.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.314160976484922 -2.52893441163143 0.0287746118679240 1 2.54169954398260 12.4676528757064 -0.314160976484922 0.155467007261042 AT5G19400_at 7.05439678652492 6.67063116847276 8.2542090504059 8.18741821283889 8.54234084383448 8.11785096982423 6.98745242227164 6.85947737761798 6.5829374572186 6.47884339556063 7.80931847775503 7.46153381432851 7.69787180233836 7.52797750410158 7.1991607157885 7.78945626103866 7.49845063008751 7.88096264377295 6.34249769110742 0.226525741506561 0.210593904709129 0.219929982767161 0.207433236772574 0.205870644804613 0.227073013531046 0.206588475518852 0.206103434632353 0.226415403804705 0.208056103373775 0.207700680254336 0.209485620531355 0.210009888865093 0.218074205082083 0.206641764187106 0.207161774649186 0.216107929541783 0.205870644804613 0.21961036774266 5 5 + 6543788 6544676 6544001.5 6540005 6545017 + gene protein_coding_gene TRUE TRUE AT5G19400.1 similar to binding [Arabidopsis thaliana] (TAIR:AT1G28260.2); similar to putative cytokinin inducibl protein [Oryza sativa (japonica cultivar-group)] (GB:AAQ56453.1); similar to Os08g0305300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061501.1); contains domain SMG-7 (SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7) (PTHR15696); contains domain TPR-like (SSF48452) 0.255869271197029 2.52873183377926 0.0287848318089254 1 2.54138787007025 14.6223142685306 0.255869271197029 0.102132506913657 AT5G47760_at 6.52760880122957 6.29387490894431 7.48975982509058 7.3697848728824 7.63326170367107 7.79712098671986 6.33563388550617 6.2044131675856 6.02058529989954 6.13318620429586 7.36452026897932 7.07598584575116 7.3695607324944 7.61414219345038 7.4430084635674 7.44491326053405 7.36553971932108 7.37152264056835 6.12982375661445 0.177484899911668 0.177599399148797 0.175632663958801 0.176656843390949 0.177584708106327 0.171912435756887 0.171656077769018 0.177043194412885 0.179614904750235 0.176572075969495 0.171811428592094 0.173482387343755 0.171656077769018 0.173968920729488 0.176018651239238 0.173305070927280 0.185743983283319 0.174565618357652 0.180706771951028 5 5|0 -|/ 19360571 19361531 19361038.25 19360112 19362265 - gene protein_coding_gene TRUE TRUE AT5G47760.1 ATPK5 (Arabidopsis thaliana serine/threonine protein kinase 5); phosphoglycolate phosphatase serine/threonine protein kinase similar to phosphoglycolate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G36790.1); similar to phosphoglycolate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G36700.1); similar to putative phosphoglycolate phosphatase precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD29554.1); similar to Os09g0261300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062708.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IIA; (InterPro:IPR006357); contains InterPro domain 2-phosphoglycolate phosphatase, eukaryotic; (InterPro:IPR006349); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.220035775194619 2.52807773099645 0.0288178553287195 1 2.54038153563294 13.6942727160470 0.220035775194619 0.0581974016962283 AT5G59070_at 2.51416119877842 3.23388511588286 3.36167679529268 3.58386146293482 3.04073642759576 2.84964763914829 1.37609132874268 1.71261676950474 2.9474804323562 1.62764217435525 2.11331460542665 2.75348275421459 1.57048372465691 2.49171957827283 2.20210172570846 2.22191908370806 1.57827928818862 2.97640338160303 1.73706742885084 0.223130860646944 0.219524010475267 0.232779794775020 0.218848290037974 0.225544403926717 0.225460937512365 0.222088949023254 0.227271130270283 0.217255472824478 0.223635631905541 0.217255472824478 0.222752277607344 0.221148266038626 0.220541722623666 0.221094436326907 0.217255472824478 0.225741869685346 0.223673761062891 0.223824322448739 5 5 + 23864030 23864506 23864267.364 23862424 23864619 + gene protein_coding_gene TRUE TRUE AT5G59070.1 glycosyl transferase family 1 protein similar to glycosyl transferase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G19460.1); similar to glycosyltransferase family-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10154.1); similar to Os01g0653200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043742.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) 0.303433430000686 2.52737890138297 0.0288531781558573 1 2.53930643673643 4.88034777368994 0.303433430000686 0.146549085815459 AT5G18840_at 1.55254566509800 1.39725070903312 1.56645973181298 1.39907458604690 1.45802848440687 1.63070234759598 1.49745444209574 1.57576526211054 2.27619965041491 1.44919043072480 1.45508155770405 1.64231856223261 1.94204509997843 1.57261179915775 1.45940387209765 1.40164140105066 1.49043024489212 1.55217624650555 1.60211563049369 0.193535489328813 0.200698667047571 0.20626701472741 0.203920748892185 0.193535489328813 0.199351550949443 0.193535489328813 0.201920233732964 0.200334284193486 0.205854625023059 0.200961134188448 0.202912246692178 0.20133288130242 0.207020470756989 0.198527089961575 0.193535489328813 0.19940038959338 0.204128658446420 0.204113852125446 5 0|5 /|+ 6285526 6286283 6285775.857 6282883 6286709 + gene protein_coding_gene TRUE TRUE AT5G18840.1 sugar transporter, putative Identical to Sugar transporter ERD6-like 16 [Arabidopsis Thaliana] (GB:Q8LBI9;GB:Q8VZI5); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT2G48020.1); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT3G05150.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.215768954547462 -2.5267281444458 0.0288861094244535 1 2.53830533847064 3.17980957110676 -0.215768954547462 0.0513605595218144 AT5G65460_at 5.36259705181346 5.253062068163 6.55160968786418 6.48005315828662 7.23256049409284 6.73564380310586 7.05428535241861 6.75647423759135 6.68365063770809 7.01129762746762 7.9855006071043 7.9055497310142 7.77675080140059 8.01719631256712 7.439543294379 7.75756963541061 7.70614628260596 7.88173075703363 6.97298679526626 0.166197453722320 0.161066065514576 0.163396650127729 0.154633163230847 0.148675882851919 0.160329159364175 0.15786625458378 0.148415553867337 0.154449775981241 0.154207693076962 0.147484250592404 0.153247473677007 0.150273455195470 0.155003437811681 0.147315332353826 0.151157635707034 0.162360017233216 0.146510137752681 0.15435082710428 5 5 - 26179102 26179664 26179347.455 26179057 26186227 - gene protein_coding_gene TRUE TRUE AT5G65460.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G10470.2); similar to 117M18_26 [Brassica rapa] (GB:AAZ66945.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.256286365726168 -2.52667341222911 0.0288888808097368 1 2.53822114258248 13.7773157889187 -0.256286365726168 0.102779888898999 AT5G16720_at 2.06744028958870 2.02908816155357 2.35258066045829 2.06397608709233 2.80160327985832 2.91573419969942 2.19738356440447 2.47828008888359 2.31886295234504 2.95017147768841 3.51925867451973 4.55866999970156 3.48352776210348 3.77655746235335 3.92432916384412 3.90652879005346 2.77843483049606 3.43133466038497 3.18008966373930 0.213653165183865 0.217096304274094 0.215504677065425 0.22521135181084 0.222738897883912 0.2120660076696 0.214167111773117 0.214893092361597 0.216605931654301 0.214162679309409 0.210505566765156 0.220712464034233 0.219211170417895 0.217650625129459 0.212995980337985 0.215848817416589 0.219243122750892 0.209601020380247 0.222098863140474 5 5 + 5496051 5496512 5496288 5494231 5496813 + gene protein_coding_gene TRUE TRUE AT5G16720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70750.1); similar to Os03g0708700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051039.1); similar to Protein of unknown function, DUF593, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX95673.1); similar to Os03g0259900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049616.1); contains InterPro domain Protein of unknown function DUF593; (InterPro:IPR007656) 0.230120147571220 2.52659240471873 0.0288929831340711 1 2.53809652733244 5.6076132243705 0.230120147571220 0.0727431342145925 AT5G03620_at 1.94041871898239 1.79302456570338 1.84903220787004 1.73441104729347 1.85207049391078 1.68498883158384 2.00881049039139 1.88597130922103 1.83653093247758 1.73845190532047 1.87735299217189 1.66096951538526 2.12279631617355 1.51493461898671 1.81298115778100 1.87123215980374 1.96291517796852 1.79070761210007 1.93776229593785 0.221575063250672 0.224782016547713 0.226599804067312 0.228148181162569 0.229464523702837 0.232254354424298 0.22908439339264 0.227865715113524 0.227648153872680 0.227307472650752 0.233725844715327 0.226176707200514 0.236791540989854 0.23272369774526 0.232084335921719 0.225324932847107 0.226313544044637 0.222398066597982 0.221575063250672 5 0|5 /|+ 921361 921832 921553.6 918737 921873 + gene protein_coding_gene TRUE TRUE AT5G03620.1 subtilase family protein similar to XSP1 (XYLEM SERINE PEPTIDASE 1), subtilase [Arabidopsis thaliana] (TAIR:AT4G00230.1); similar to subtilisin-like protease C1 [Glycine max] (GB:AAN12272.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.213996762149270 -2.52608489914379 0.0289186969157711 1 2.53731583785936 3.67574991064036 -0.213996762149270 0.0482908700415194 AT5G45650_at 10.0096648917108 10.1162284863141 9.7020373925764 9.7202802999597 10.6135183175706 10.4420094075413 10.2277640681270 10.0231031657714 9.21839670285017 9.86680843556517 10.3233589362852 10.6068592824463 10.2121620210882 10.3837527677914 10.4442080741758 10.1176017463798 10.2517429089808 10.2851094835064 9.26704634287702 0.0742339698282827 0.070678194787846 0.0740820695633 0.0711981295649706 0.070633613035683 0.0739107988908996 0.0702236266463954 0.0708990664680386 0.0796185616402408 0.0743096145945123 0.0710345967341448 0.0702236266463954 0.0729411293682866 0.0721767627576707 0.0727384776083502 0.0702236266463954 0.0702236266463954 0.072506668790664 0.0755834926152838 5 0|5 /|- 18530750 18531168 18531040.667 18530658 18536095 - gene protein_coding_gene TRUE TRUE AT5G45650.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G45640.1); similar to subtilisin-like proteinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAB21149.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.214701108222675 -2.52422309926926 0.0290132216796104 1 2.53445207802499 19.9962507018694 -0.214701108222675 0.0498535599587593 AT5G04140_at 12.0459659183058 12.0403324629029 12.5746860990217 12.4254312775513 12.6547450959292 12.2843151841234 12.8854833253836 12.6241370300087 12.9672983176033 13.2839191613012 13.5261194322784 13.5661380040724 13.3473376557092 13.4566354129133 13.3276714203482 13.7504600055462 13.1252227221884 13.7709062733165 13.2467983291664 0.0775049797649047 0.072977612806125 0.0769715538590456 0.0715667616106187 0.0711175683240108 0.0838132321120108 0.0748314728222211 0.0714438612455885 0.0808221540783916 0.0708902695265317 0.073170060250666 0.0708902695265317 0.0713117139624122 0.0732865493338798 0.0762015396642097 0.0708902695265317 0.0770476626929057 0.0715597829449492 0.0708902695265317 5 5 + 1137473 1138161 1137814.818 1129853 1138443 + gene protein_coding_gene TRUE TRUE AT5G04140.1|AT5G04140.2 GLU1 (FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. Identical to Ferredoxin-dependent glutamate synthase 1, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT 1) (GLU1) [Arabidopsis Thaliana] (GB:Q9ZNZ7;GB:P93649); similar to GLT1 (NADH-dependent glutamate synthase 1 gene) [Arabidopsis thaliana] (TAIR:AT5G53460.1); similar to GLU2 (Glutamate synthase) [Arabidopsis thaliana] (TAIR:AT2G41220.1); similar to Ferredoxin-dependent glutamate synthase [Medicago truncatula] (GB:ABD28330.1); similar to Ferredoxin-dependent glutamate synthase, chloroplast precursor (Fd-GOGAT) (GB:P23225); similar to Ferredoxin-dependent glutamate synthase, chloroplast (Fd-GOGAT) (GB:Q43155); contains InterPro domain Ferredoxin-dependent glutamate synthase; (InterPro:IPR002932); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain Glutamate synthase, central; (InterPro:IPR006982); contains InterPro domain Glutamate synthase, alpha subunit, C-terminal; (InterPro:IPR002489); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583) -0.23777175056738 -2.52401141562115 0.0290239882201036 1 2.53412649544828 25.7667953667301 -0.23777175056738 0.0826014661235716 AT5G06520_at 1.9087086828478 1.60183363549523 2.66221334482204 2.69122633263755 2.45597645173306 2.50253026648976 2.1178748508097 2.06325750788985 2.17538101486337 2.20375224610469 2.79048015998118 1.75751555150255 2.32218387145407 2.29021495617679 2.16019534106751 1.87186403366356 2.68181337582804 2.40660988104263 1.87098735293364 0.224750581491788 0.202555215861332 0.207684035918581 0.201693834704142 0.208002000749006 0.208742517080751 0.204236418107303 0.21153085600886 0.208839885418039 0.206647423478119 0.207427373324655 0.205418047130138 0.201270215484845 0.213766023009624 0.213385799651439 0.207414091677386 0.200973766884926 0.207400862975539 0.203481820969609 5 5|0 -|/ 1987310 1987867 1987602.8 1987251 1989373 - gene protein_coding_gene TRUE TRUE AT5G06520.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT1G14650.1); similar to PREDICTED: similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120) isoform 5 [Canis familiaris] (GB:XP_865871.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) 0.217528621169214 2.52377562540369 0.0290359854836936 1 2.53376384084713 4.43469422624401 0.217528621169214 0.0547696440121828 AT5G02810_at 11.0741396480404 10.9697691396577 11.6990591736996 11.5197455839614 12.0691165504267 11.7547496487856 11.1011707057420 10.8216701095271 10.6687257444751 10.6289125339265 11.5583208319805 11.4397796620682 11.5579329465499 11.6230780482397 11.1191478599635 11.5430291033042 11.5145241534211 11.3898640605383 10.6207168726272 0.0687750046959019 0.0640767726076245 0.065204746520576 0.0645735913427343 0.0656729066186912 0.0693305274613389 0.0655549281791031 0.064268759662548 0.07338085775276 0.0651775900160043 0.0640767726076245 0.0646108382676882 0.0640767726076245 0.0640767726076245 0.0673132679882978 0.0642722324205762 0.0708628120398908 0.0711308582566809 0.065239622816885 5 5 - 638318 638959 638720.818 637895 641975 - gene protein_coding_gene TRUE TRUE AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Identical to Two-component response regulator-like APRR7 (Pseudo-response regulator 7) (APRR7) [Arabidopsis Thaliana] (GB:Q93WK5;GB:Q9LZ04); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to Os03g0284100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049760.1); similar to pseudo-response regulator 73 [Oryza sativa (indica cultivar-group)] (GB:BAD38859.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.236508465242203 2.52324397771933 0.0290630542027166 1 2.53294616666071 22.4300082201140 0.236508465242203 0.0811686697770037 AT5G11930_at 1.69429710107716 2.11450204305297 2.38997425503032 3.13614399757446 2.42841995479324 2.68676021850369 2.21421081123397 2.31115844893448 1.66013992525191 1.65440162343336 2.08610572107617 1.93107459789987 2.55973745212085 2.11436965938229 1.35552800553978 2.59539185575740 2.74312143511300 1.75916949756417 1.78768949824069 0.195991319781016 0.187876396412711 0.191419206566963 0.19082956516126 0.191266574458721 0.195302837496965 0.187161926202212 0.187389515337452 0.198338802686609 0.193157778992969 0.192897274193276 0.194981869304594 0.194096624427532 0.195455866767981 0.190684536027774 0.187161926202212 0.190864357025784 0.188760481177866 0.187161926202212 5 5 - 3845173 3845566 3845348.727 3844941 3845646 - gene protein_coding_gene TRUE TRUE AT5G11930.1 glutaredoxin family protein Identical to Glutaredoxin-C10 (AtGrxC10) (GRXC10) [Arabidopsis Thaliana] (GB:Q29PZ1;GB:Q9LYI0); similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G33040.1); similar to Glutaredoxin [Medicago truncatula] (GB:ABE86256.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin-like, plant II; (InterPro:IPR011905) 0.313636314654423 2.52247972091489 0.0291020096595421 1 2.53177079019490 4.29383633395771 0.313636314654423 0.155699197205251 AT5G08040_at 8.89024417458957 9.00436945504926 9.49279902193524 9.62195732315005 9.62557910952307 9.42524458086455 9.45200685537395 9.54709685402364 9.06330084805402 9.26805768010441 9.94807943970291 10.2191502216891 9.74485397595577 9.98038156258457 10.1812888570510 9.97563865661806 9.63433554966152 9.91626733849644 9.45377006144879 0.104851099231963 0.108358783952064 0.109976561300204 0.105939938012347 0.102182295641969 0.103984032468241 0.102510345615929 0.104924102268781 0.124525035211782 0.105253780930439 0.105786307278294 0.101396276256043 0.108092295617046 0.108706145076226 0.104125698049146 0.100551451010185 0.117425875086692 0.105084563312757 0.100551451010185 5 5|0 -|/ 2577363 2578048 2577669.333 2577203 2578120 - gene protein_coding_gene TRUE TRUE AT5G08040.1 TOM5 (MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG) Identical to Mitochondrial import receptor subunit TOM5 homolog (Translocase of outer membrane 5 kDa subunit homolog) (TOM5) [Arabidopsis Thaliana] (GB:Q9SD80;GB:P83431); similar to hypothetical protein LOC_Os12g38650 [Oryza sativa (japonica cultivar-group)] (GB:ABA98999.1) -0.213642643885093 -2.51989073557501 0.0292343566956752 1 2.52778954675091 18.9882666618582 -0.213642643885093 0.0486041754017634 AT5G03690_at 5.44748764903259 5.08957315604943 6.41156032546636 6.24258897284064 6.53822561005541 6.6832516331984 5.51354343172063 4.90175626143722 4.85668279275118 5.22821350472084 6.18577075041833 6.58236155304667 6.04939385377097 6.10561701915859 6.09241641215778 6.52614131008177 6.53370423112926 6.16346634106606 4.71959961291212 0.168027317981135 0.169525858285783 0.16091044064709 0.166277149423308 0.165090749925672 0.164727179765521 0.163740400083656 0.178752458524939 0.183168067240016 0.176605896230679 0.168114871969939 0.170385874948528 0.171490804607513 0.170802696439030 0.174956512248904 0.169295135939513 0.164252077971292 0.177382684088446 0.168253458103337 5 5 - 963438 963922 963666.364 963147 965049 - gene protein_coding_gene TRUE TRUE AT5G03690.1|AT5G03690.2 fructose-bisphosphate aldolase, putative similar to fructose-bisphosphate aldolase, putative [Arabidopsis thaliana] (TAIR:AT2G36460.1); similar to Fructose-bisphosphate aldolase, class-I [Medicago truncatula] (GB:ABE84500.1); contains InterPro domain Fructose-bisphosphate aldolase, class-I; (InterPro:IPR000741) 0.282076324309208 2.51852281913128 0.0293045224187403 1 2.52568629541409 11.4608438319659 0.282076324309208 0.128570437094845 AT5G40960_at 3.84097808654584 4.99128414665604 5.99627960823483 6.5841923722081 7.0974610062519 6.71783302732905 5.49214575208362 5.97471511308329 4.50727817045123 5.12443719903695 6.10318447259619 6.07119472763123 6.16345349601715 6.05690559997067 5.20563818683086 6.60109431513962 5.9820073956316 6.92434637291638 4.7746240206071 0.313072745837934 0.282518612760898 0.290264311625887 0.291512432742818 0.282653063688388 0.285023890391814 0.284312886849357 0.278335877922151 0.297872638273399 0.278335877922151 0.289482855242910 0.286457682273715 0.282552695132613 0.298294806020349 0.298763357475487 0.278335877922151 0.294547966519145 0.278335877922151 0.278335877922151 5 5 - 16429976 16430153 16430073.091 16429973 16430179 - gene protein_coding_gene TRUE TRUE AT5G40960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63500.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45503.1); similar to Os01g0849500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044809.1); similar to P0402A09.15 [Oryza sativa (japonica cultivar-group)] (GB:BAB62632.1) 0.431833365595489 2.51606424229289 0.0294310488897137 1 2.52190657746350 11.3071567394858 0.431833365595489 0.247524801293375 AT5G43110_at 1.32065492552593 0.928372281459214 1.71544170425676 1.75360369449696 1.24754821932110 1.56452873969259 1.15448593792103 1.21171152092634 1.24742399144453 1.55036845229866 1.29236403122781 1.21557036426072 1.61255208690969 1.58820666818697 1.9133177403117 1.35718566230659 2.00004711330065 1.5717643458754 1.13843769416047 0.218690573935966 0.221505496088831 0.228419845853647 0.221659725611674 0.220574456626129 0.218797976593994 0.221305867907310 0.220613035993409 0.213279700239695 0.218952752293062 0.213279700239695 0.213961380010824 0.224533004029767 0.218239066509707 0.224119303803125 0.216759723461475 0.227557582308470 0.213279700239695 0.219193579736346 5 5|0 +|/ 17328491 17328870 17328658.125 17327070 17329165 + gene protein_coding_gene TRUE TRUE AT5G43110.1 APUM14 (ARABIDOPSIS PUMILIO 14); RNA binding similar to APUM13 (ARABIDOPSIS PUMILIO 13), RNA binding [Arabidopsis thaliana] (TAIR:AT5G43090.1); similar to Os11g0579900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068151.1); similar to Os12g0488900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066792.1); similar to Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57619.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Pumilio/Puf RNA-binding; (InterPro:IPR001313) 0.241544913312108 2.51441011871384 0.0295164776606112 1 2.51936394814959 2.80251973504099 0.241544913312108 0.088086936545871 AT5G10710_at 5.51752178860646 5.72959296691422 7.37993297494493 7.0905166586085 7.54491976194807 7.18777093016783 5.31576213593984 5.34630975354692 5.12122217345594 5.37997002352303 6.07692731726633 5.64612861948321 6.45606446688806 6.072202447775 6.15582984857906 6.64725568105583 6.81491159635371 6.12305535017459 6.03991530438069 0.206135902098548 0.199179469030028 0.195786007212086 0.201826838874496 0.198793913535058 0.205624455906205 0.198493674976218 0.214703584069808 0.213445596117565 0.195786007212086 0.200345773655473 0.195786007212086 0.200326925049767 0.201320415323996 0.201261834558964 0.1969176435211 0.199412773383419 0.205511772806433 0.201598231546977 5 5|0 +|/ 3381400 3382474 3382037 3379050 3382780 + gene protein_coding_gene TRUE TRUE AT5G10710.1|AT5G10710.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80411.1) 0.241220446102999 2.51391627900639 0.02954202970301 1 2.51860489994376 12.2704155795347 0.241220446102999 0.0877686499183712 AT5G57460_at 7.44710168467565 7.67231487830413 7.71178138005839 8.1028627382051 7.99410114564829 8.36202091176466 6.69753313989617 6.98503800581747 7.02667016128207 6.99007380876871 8.92476269220248 8.87291595992524 8.3638218414872 8.26963931187322 8.92814688323405 8.2390713380114 8.17105401429555 8.69252269381674 6.84549977845234 0.186082805470564 0.18354232410103 0.190855270713252 0.188257047879975 0.190046214004051 0.184762223008374 0.189014302409885 0.187933608721181 0.197297195967214 0.186872647067299 0.18354232410103 0.186153779044555 0.183603002013065 0.193167681223047 0.187767085318931 0.189090942149591 0.185006027289518 0.190163758499106 0.186722524683708 5 5 + 23293953 23294394 23294118.455 23292395 23294710 + gene protein_coding_gene TRUE TRUE AT5G57460.1 similar to Os08g0243900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061348.1); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) 0.264403323265621 2.51309664599414 0.0295844868093844 1 2.51734515296691 15.3775057812246 0.264403323265621 0.112377601880224 AT5G07710_at 4.96695614404188 5.39092685536099 6.41751441305991 6.47100387197185 6.52263663766726 5.9931461872679 4.31377016702617 4.37662775755678 4.52826678388513 4.58867941073639 4.9763877827122 5.29458391748251 5.41348488881887 5.18718760105727 5.33680896749741 5.60238781713949 5.98237872646378 5.61088735988597 4.54154861889121 0.222826563466009 0.217475237692299 0.222506041030081 0.218711476631793 0.226523001387465 0.220687728501232 0.222076812332833 0.224092407657531 0.226741516946835 0.217276598670997 0.213476352575224 0.217536824508881 0.216731032037544 0.222077583110217 0.215348973567796 0.225039579709400 0.225565929598672 0.213476352575224 0.222018279292286 5 5 + 2454656 2455318 2454929.545 2453136 2455547 + gene protein_coding_gene TRUE TRUE AT5G07710.1 exonuclease family protein similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT5G61390.1); similar to Os10g0407500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064570.1); similar to exonuclease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66074.1); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 0.270403962518132 2.51266417324712 0.0296069131286518 1 2.51668048608972 10.5457452478123 0.270403962518132 0.118251368145928 AT5G17800_at 2.34176329656329 2.65775396673525 2.81232539923331 2.81648376299941 2.71677525811644 2.80259236851839 2.56476182740689 2.67679028260896 2.76080118686367 2.98052676043697 2.75136443828618 2.89538102337898 2.77306424445476 2.73634997163357 2.79495548880722 2.67893653709691 3.26226181050805 3.01044035871389 2.72734132805477 0.217689560114052 0.207733800256280 0.208083319126882 0.211447589433338 0.219620119549669 0.210644040093993 0.21854049993612 0.209064095303727 0.21538757635842 0.216468599529858 0.211579345199695 0.207733800256280 0.215162307949140 0.213175765408803 0.207733800256280 0.213822483970945 0.207733800256280 0.214662024592344 0.222987161751321 5 5|0 +|/ 5877995 5878977 5878232.2 5877191 5879333 + gene protein_coding_gene TRUE TRUE AT5G17800.1 AtMYB56 (myb domain protein 56); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB54 (myb domain protein 54), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G73410.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:BAD81105.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.219784063726344 -2.51265938046959 0.0296071617566660 1 2.51667312018560 5.51652276655361 -0.219784063726344 0.0598935033307575 AT5G39400_at 0.746904475905703 0.861539496420557 0.727960050682178 0.854726244434787 0.467021379531134 0.543546210038593 0.440676325084704 0.688351331671915 1.48841440282358 0.335322273220316 0.481916810203065 0.589857156384928 0.491818204981846 0.481922554152165 0.95990025493026 0.488681019362974 0.732447025075032 0.666783999152716 0.879530037818814 0.250859904034925 0.242096001727418 0.249218870545780 0.24651921216047 0.249827427981856 0.242096001727418 0.252272423529601 0.242096001727418 0.249710064728333 0.245063909101328 0.243389237655119 0.247643241583025 0.250422302762336 0.244336986624385 0.247683543716734 0.242620570592692 0.24598553094233 0.252323497212886 0.24472883045802 5 5|0 +|/ 15784391 15785089 15784781.7 15783265 15785472 + gene protein_coding_gene TRUE TRUE AT5G39400.1 pollen specific phosphatase, putative / phosphatase and tensin, putative (PTEN1) similar to phosphoric monoester hydrolase [Arabidopsis thaliana] (TAIR:AT3G19420.1); similar to PREDICTED: similar to PTEN [Strongylocentrotus purpuratus] (GB:XP_001177499.1); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.215896036218234 -2.51203127601083 0.0296397627923204 1 2.51570782253369 1.42271808054684 -0.215896036218234 0.0537333517182312 AT5G13990_at 1.66598337456747 1.56915093821184 1.31110288646992 0.96488682315368 1.50906181387685 1.43141708880938 1.75748620289810 1.25127876929577 1.55557534239441 1.63737729410419 1.35965223561129 1.50136253293706 1.35167443987119 1.37204903725634 1.59539728741198 1.12975315729104 1.39808367624503 1.63182702037668 1.25456584197335 0.209274358571936 0.209274358571936 0.211359471702521 0.214480191758784 0.213842335047574 0.210540693755989 0.212895774640922 0.219137656405165 0.211873794537501 0.209274358571936 0.215425115502673 0.209274358571936 0.223483559863858 0.217213083869721 0.217659057291333 0.209274358571936 0.22095652115391 0.215664816098219 0.217743530589105 5 5 - 4514727 4515254 4514976 4514570 4516894 - gene protein_coding_gene TRUE TRUE AT5G13990.1 ATEXO70C2 (exocyst subunit EXO70 family protein C2); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70C1 (exocyst subunit EXO70 family protein C1), protein binding [Arabidopsis thaliana] (TAIR:AT5G13150.1); similar to Os12g0165600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066242.1); similar to Os11g0167600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065840.1); similar to unnamed protein product [Solanum lycopersicum] (GB:CAA78112.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.259947294707825 -2.50977331265643 0.0297572514562539 1 2.51223803250954 2.88253652859324 -0.259947294707825 0.108282552030759 AT5G10870_at 6.51630238052674 6.04203401580368 7.82475237411258 7.20553883162691 7.84924798339442 6.92610454654529 6.22274773386716 6.16922230071883 5.26793096706111 5.01418520575599 6.72857578045315 6.92923178346201 6.21629121583171 6.90307867780337 6.65673684077949 6.17057373251539 6.13158616806113 6.82872342829082 4.52791633396389 0.278628217638257 0.278032543127406 0.270774888343231 0.275599986109400 0.273556780755096 0.295227836337047 0.264530517587169 0.269487957810903 0.270511386682989 0.271255556669113 0.268214727733854 0.266910690897505 0.271338003914318 0.277304841661045 0.264850287848995 0.264530517587169 0.286097568632056 0.27520652506213 0.278961424893609 5 5|0 -|/ 3430698 3431448 3431018.4 3430547 3432463 - gene protein_coding_gene TRUE TRUE AT5G10870.1 ATCM2 (CHORISMATE MUTASE 2); chorismate mutase Encodes chorismate mutase AtCM2. similar to CM1 (chorismate mutase 1), chorismate mutase [Arabidopsis thaliana] (TAIR:AT3G29200.1); similar to chorismate mutase [Medicago truncatula] (GB:ABE94587.1); contains InterPro domain Chorismate mutase; (InterPro:IPR002701); contains InterPro domain Chorismate mutase of the AroQ class, eukaryotic type; (InterPro:IPR008238) 0.379471043691989 2.50963701295285 0.0297643581730053 1 2.51202859938067 12.5981323736544 0.379471043691989 0.209347129392599 AT5G44230_at 0.827709941406409 1.27549760732169 1.49751951462360 1.47321517963201 1.38293515342686 1.38164675077053 1.14621331354695 1.23754121386621 1.01229711813382 0.738072379504038 0.882670539096649 1.28765541045388 1.21097713421248 1.23865701644872 1.60682394799243 1.57103397161815 1.13734959928808 1.19113816306894 1.11251997790888 0.202368688511674 0.205837596799952 0.204858629560999 0.206766229198018 0.205115931886427 0.212400280557034 0.203191823934570 0.202434060395746 0.212898732226194 0.207748700993348 0.21075047687242 0.201174125636053 0.208715203846337 0.205492947608677 0.201174125636053 0.201174125636053 0.210399160933293 0.207731407786096 0.204595640572623 5 5 + 17832940 17833434 17833193.545 17831563 17833536 + gene protein_coding_gene TRUE TRUE AT5G44230.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G29760.1); similar to Os06g0694300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058441.1); similar to Os01g0176300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042180.1); similar to Asp/Glu racemase; Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83029.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.233601177760328 2.50933740234166 0.0297799858445715 1 2.51156823563077 2.38782719163495 0.233601177760328 0.0791991129957886 AT5G58900_at 6.75124526081949 6.96506843411475 6.879804333482 6.89858087831104 8.28665619084816 7.38519786255178 6.67071708971436 6.91329068741978 6.89900478629279 6.52542557663622 8.71311965948508 8.99430635211205 8.6159011914422 9.07248225999888 8.86720624008417 9.09186797173712 7.8913242270476 8.48738271891888 6.41006905710116 0.262934283360794 0.260215007609102 0.257069651182927 0.260834466128535 0.26258761983616 0.258946629168334 0.256461437150472 0.259532100192542 0.257062041473381 0.259268500025475 0.255575862196962 0.257614581583549 0.25350573221904 0.262874093160798 0.257463413552757 0.256344843233412 0.263904886275803 0.25796794481572 0.271136937084882 5 5 - 23800519 23801573 23800853.364 23800349 23802560 - gene protein_coding_gene TRUE TRUE AT5G58900.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G38090.1); similar to MYB-like transcription factor DIVARICATA [Antirrhinum majus] (GB:AAL78741.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.324065536839097 2.50897212003979 0.0297990498570539 1 2.51100697759216 14.7579194092977 0.324065536839097 0.165766313334126 AT5G05870_at 6.10015993649829 6.14748885521482 7.10548873561918 6.74304639344228 7.28944254066384 7.37513805991064 6.43631484510301 6.47675309015805 6.28024894590303 6.04826818905088 7.16914465827911 7.05831537920074 6.92249284349398 6.75822794892913 6.91625863964194 7.02726755807869 7.21875883955361 6.88020256060157 6.23702120098012 0.173429746734204 0.169387596938918 0.181603043131160 0.18202171752757 0.181815454416815 0.174662941082353 0.167016892840138 0.167016892840138 0.190180447630382 0.182684542246345 0.172738516431461 0.167016892840138 0.171702552901601 0.169854688133548 0.171267793476317 0.167683666893601 0.167966852134992 0.182528906870499 0.180980686953538 5 5 + 1768619 1769148 1768847.545 1767640 1769263 + gene protein_coding_gene TRUE TRUE AT5G05870.1 UGT76C1 (UDP-GLUCOSYL TRANSFERASE 76C1); UDP-glycosyltransferase/ transferase, transferring glycosyl groups Identical to Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-) (UGT76C1) [Arabidopsis Thaliana] (GB:Q9FI99); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.223103275793039 -2.50863713400069 0.0298165432560789 1 2.51049228238454 13.3004022231348 -0.223103275793039 0.0653458286925077 AT5G23230_at 3.67273453281113 3.83777628565616 4.6758313830458 4.82291059488316 6.09288161864403 6.41797616637606 3.98069254324241 4.62642512609764 2.71720103726389 2.9486593914633 3.13357274588748 2.56844021249062 3.64217679367191 3.4735199234755 2.96986653483713 3.90578889945176 4.03227363029751 3.33907109223360 2.83891576495636 0.254884304004265 0.24906687580345 0.251984001899615 0.258718750434422 0.266129104545092 0.276228986935987 0.254014504672982 0.249827363059627 0.251169771622689 0.252074323396807 0.250274840352564 0.257365147608975 0.255974068006656 0.250828878089917 0.261080459176558 0.24906687580345 0.259838967518011 0.249734351884904 0.255345642824291 5 5 - 7826022 7826518 7826296.545 7825885 7826614 - gene protein_coding_gene TRUE TRUE AT5G23230.1 isochorismatase hydrolase family protein similar to isochorismatase hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G23220.1); similar to isochorismatase hydrolase family protein [Musa acuminata] (GB:ABF70079.1); contains InterPro domain Isochorismatase hydrolase; (InterPro:IPR000868) 0.283390801975580 2.50821881118465 0.0298384027792160 1 2.50984955969299 7.8749105948134 0.283390801975580 0.130828422595829 AT5G44720_at 10.1228167715993 10.3206239175110 10.3347250685313 10.4844069203017 10.9038075425525 10.0987334136022 10.2466956141825 10.0228161075952 8.28889722527862 9.6163232672587 10.7596901515993 10.8649832614920 10.7060392645359 10.7800264901043 10.4214516044049 10.5921103644864 10.4869599630633 10.9280865908140 9.22413778105017 0.120555971201173 0.116269563050251 0.122821461686262 0.116269563050251 0.118509312814053 0.119736696155657 0.119177500827894 0.117246586007838 0.138306611593464 0.120710381572348 0.124731104415892 0.117590712772209 0.116269563050251 0.125443848992998 0.120918580123308 0.118604838739584 0.123140488728642 0.118505706419318 0.122706758557435 5 5|0 +|/ 18061645 18062472 18061980.889 18060198 18062723 + gene protein_coding_gene TRUE TRUE AT5G44720.1|AT5G44720.2 molybdenum cofactor sulfurase family protein similar to molybdenum cofactor sulfurase family protein [Arabidopsis thaliana] (TAIR:AT1G30910.1); similar to molybdenum cofactor sulfurase-like protein 1 [Oryza sativa (japonica cultivar-group)] (GB:ABH88162.1); similar to Os09g0560700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063929.1); contains InterPro domain MOSC, N-terminal beta barrel; (InterPro:IPR005303); contains InterPro domain MOSC; (InterPro:IPR005302) 0.305910276233627 2.50635875984950 0.0299357908939188 1 2.50699195178574 20.1845971124053 0.305910276233627 0.150845578189893 AT5G44570_at 0.517827704675131 0.691499900798554 1.20989428740357 1.36642829851671 0.781108221660177 0.699415541519696 -0.0541123183480074 0.387205142380807 0.326345770404167 0.701285115056964 0.46499636791796 0.226980110828310 0.756848036182155 0.413231803295672 0.469679197444502 0.45866392812153 0.658527472911357 0.646487447110703 0.649199701131225 0.200730449507150 0.194512571513947 0.200601621964905 0.196601341779844 0.203769066864370 0.202707612234642 0.193969448218212 0.193969448218212 0.202725429448637 0.200162854761758 0.193969448218212 0.203733353978297 0.195395321143747 0.196354958483241 0.198368998737887 0.198748071901174 0.202233081028124 0.199690553186173 0.198965067409551 5 5|0 +|/ 17981695 17982789 17982103 17981666 17982841 + gene protein_coding_gene TRUE TRUE AT5G44570.1 unknown protein 0.240292103403999 2.50597488342015 0.0299559286494974 1 2.50640224623574 1.23534350949615 0.240292103403999 0.0875765560921455 AT5G60400_at 4.93432908005661 5.19438193439608 5.37375529843181 5.54946808411247 6.40904473794628 5.73677100455116 5.0540640695102 5.51406159889332 6.42301697805515 6.11589880228176 7.66392408855041 7.28975934587189 7.19595708766834 7.38442307956489 6.81418073448388 7.25823609650748 6.5033300042796 6.85199393954453 6.22723210405746 0.305762879385019 0.280636897377393 0.288582924402025 0.292015127405189 0.288935858316306 0.293093135522655 0.28296491625832 0.282014192442663 0.290535250333812 0.275395937767436 0.283634600835538 0.276177214044335 0.274881405460693 0.274881405460693 0.275927215531714 0.276329561195469 0.285348866700837 0.281757098900790 0.275016482114976 5 5 - 24308380 24308761 24308531.3 24308366 24309388 - gene protein_coding_gene TRUE TRUE AT5G60400.1|AT5G60400.2|AT5G60400.3 unknown protein| |similar to hypothetical protein MtrDRAFT_AC152176g22v1 [Medicago truncatula] (GB:ABE89561.1) -0.305959154691393 -2.50461545241567 0.0300273500628139 1 2.50431403474992 12.1585385635824 -0.305959154691393 0.15106910629055 AT5G06100_at 2.67592941479715 2.65323242428024 3.83845264161484 3.48420889148345 5.16316046553786 3.35944587620326 3.24665184937277 2.52673721754818 2.47459491564787 2.40337419535246 3.71409319084441 3.11410352048201 3.90028473887909 3.44925368277014 3.56649749894898 3.7262459975072 3.27752124687723 3.70640003919029 2.95016498794287 0.215363636544427 0.216055984203937 0.216261738211066 0.217241803600549 0.225438121385441 0.223318220434946 0.215991786445039 0.217685166156788 0.225241428788539 0.226514476341140 0.220676742683449 0.215363636544427 0.215363636544427 0.218498203609721 0.216685729264099 0.220575258418806 0.224961601526824 0.224515485985425 0.225215817144030 5 5 + 1839404 1839961 1839659.727 1837908 1840728 + gene protein_coding_gene TRUE TRUE AT5G06100.1|AT5G06100.2|AT5G06100.3 ATMYB33/MYB33 (myb domain protein 33); DNA binding / transcription factor|ATMYB33/MYB33 (myb domain protein 33) Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. When the target site is mutated , expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. similar to ATMYB65 (myb domain protein 65), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G11440.1); similar to transcription factor GAMyb [Hordeum vulgare] (GB:AAG22863.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to ATMYB65 (myb domain protein 65), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G11440.1); similar to Os01g0812000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044592.1); similar to transcription factor GAMyb [Oryza sativa (indica cultivar-group)] (GB:CAA67000.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.562322624239001 2.504222129892 0.0300480455206190 1 2.50370989213735 6.45156635881396 0.562322624239001 0.341653350699465 AT5G25460_at 10.3790660502314 10.4514142618470 9.6204556058557 9.67957938165046 10.7594909273453 10.5199062594147 10.5020635257568 10.6476341725014 11.2044721764349 10.9533451676930 12.7135427051675 12.8830454138912 12.5093416108825 12.2145861744905 12.9541290352254 12.2980779239048 11.2920059609617 12.125484103384 11.7544384315494 0.0891654099890315 0.083887214125226 0.0892467522184765 0.0865901292175108 0.0854041157571476 0.0883129905803818 0.0869234395882805 0.0856433505695318 0.0965767947988906 0.0882086202279175 0.0858046180087854 0.083887214125226 0.0860633785691704 0.0896593797369652 0.0887381907226946 0.0844685176832978 0.0959809333741262 0.0887633260386236 0.0890737539676115 5 5 + 8864702 8865331 8865017.818 8863366 8865680 + gene protein_coding_gene TRUE TRUE AT5G25460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain Protein of unknown function DUF642; (InterPro:IPR006946) -0.213590054086494 -2.50269262212128 0.0301286569364663 1 2.50136072993563 22.1588822103491 -0.213590054086494 0.051138022364165 AT5G40850_at 8.10888677348002 8.0858145391926 8.30564848070466 8.19605176976912 8.64231786848628 8.45913469041042 8.51674769639316 8.47549608261819 6.77534123251207 7.9551215800284 8.86249473076943 9.01576545352334 8.51702813371814 8.5008149796498 8.87450494228262 8.80567010625673 8.5599510579456 9.25550123719334 7.97257850509578 0.123068888709572 0.125344915764698 0.119003817948235 0.128599004293445 0.121894403424095 0.120474963607424 0.118019495687045 0.120343669223339 0.145426819886093 0.127485771737929 0.127556784773395 0.122110213082991 0.119376424974693 0.127922513147636 0.123474969626032 0.123517058106130 0.130640980785192 0.122964899882817 0.122858855528642 5 5|0 +|/ 16385080 16385909 16385481.375 16383698 16386327 + gene protein_coding_gene TRUE TRUE AT5G40850.1 UPM1 (UROPHORPHYRIN METHYLASE 1); uroporphyrin-III C-methyltransferase Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. similar to uroporphyrinogen III methyltransferase [Zea mays] (GB:BAA11909.1); contains InterPro domain Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; (InterPro:IPR000878); contains InterPro domain Uroporphyrin-III C-methyltransferase, C-terminal; (InterPro:IPR006366); contains InterPro domain Uroporphiryn-III C-methyltransferase; (InterPro:IPR003043); contains InterPro domain Uroporphyrin-III C-methyltransferase, plant; (InterPro:IPR012383) -0.206865517316917 -2.50196418044559 0.0301671234852937 1 2.50024200951609 16.5320856223215 -0.206865517316917 0.0378359157262818 AT5G54780_at 3.44778332382597 4.11006294855847 5.2955798174405 4.96540516043536 4.83718666831513 4.26491008292778 3.19684152646627 3.40618738739468 3.13610712619947 3.49481879657599 4.09294087121956 4.34381634017868 4.35931849619167 4.26634465587186 3.86272261659009 4.14884210873648 3.68053241611967 3.91885025359816 3.22152254252473 0.238963954316158 0.230421106555253 0.237658261679777 0.234222082987671 0.238952431891312 0.25335046327321 0.230421106555253 0.230421106555253 0.235294787161887 0.235222924391641 0.230421106555253 0.237358940335520 0.230421106555253 0.230421106555253 0.230421106555253 0.230421106555253 0.237916367015943 0.231389258510802 0.236591167226817 5 5|0 -|/ 22266264 22266807 22266573.4 22265673 22269089 - gene protein_coding_gene TRUE TRUE AT5G54780.1 RAB GTPase activator similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT4G27100.2); similar to TBC domain, putative [Medicago truncatula] (GB:ABE91156.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.323130385009737 2.50053272997539 0.0302428541519383 1 2.49804379559738 7.87465484354385 0.323130385009737 0.165893976001441 AT5G40300_at 7.14092246086567 7.02104973685545 8.31526120436905 8.14205584600452 8.26730211913663 7.65345378615875 6.18937676563967 6.6855668711968 5.26451336506002 4.69035056076233 6.10925929399271 6.39491052643533 6.19725775595262 6.41518187763967 5.83576338244578 6.40981739725206 6.37575719908155 6.67327658580253 4.91525608655574 0.21792210142869 0.216905048422044 0.22443277157948 0.222556137687425 0.214160708078825 0.210613405617663 0.215470098168891 0.212473927116174 0.216943779626062 0.216977877209047 0.211196667134172 0.216977459702055 0.212702241670627 0.220664442754348 0.213878389420919 0.214650179201849 0.230192787506871 0.221066483906657 0.222726589078306 5 5 + 16128298 16129891 16129144.273 16127916 16130196 + gene protein_coding_gene TRUE TRUE AT5G40300.1 integral membrane protein, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36330.1); similar to Os01g0661000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043777.1); similar to MtN24 [Medicago truncatula] (GB:CAA75572.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702) 0.293768395856653 2.4961307727484 0.0304769108459843 1 2.49128531067728 13.0559284353373 0.293768395856653 0.141374535560720 AT5G66050_at 5.18537228169986 5.67434023462841 6.10338961474098 6.18916117202143 6.30102250792428 6.20606546585672 4.26110515022997 5.06894345806794 4.82663293005185 4.37352696405293 6.41378626783766 6.49253400803736 5.62713746195319 6.50687947832552 6.21153303965328 6.06895523563974 5.29018666088904 5.88895424283226 4.62690639948508 0.194160848201973 0.197610823676468 0.198828128151569 0.194415065859220 0.193203477620618 0.206357004342119 0.205275613120004 0.207593123934526 0.199144115944719 0.19556917246833 0.200498166161088 0.192150029382773 0.194934238289171 0.205111111436207 0.196440978771758 0.192736940584066 0.193645327125106 0.196258204782227 0.199972006920489 5 5|0 -|/ 26429870 26430928 26430482.333 26429314 26431762 - gene protein_coding_gene TRUE TRUE AT5G66050.1|AT5G66050.2 similar to wound-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G19660.2); similar to Os08g0357000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061624.1); similar to putative wound inductive gene [Oryza sativa (japonica cultivar-group)] (GB:BAD03758.1); contains InterPro domain Protein of unknown function DUF151; (InterPro:IPR003729) 0.321274549373433 2.49540029317617 0.0305159229097421 1 2.49016398481568 10.9594339342758 0.321274549373433 0.164908109596449 AT5G43810_at 6.31504446792212 6.76787052597813 6.65662424658942 6.88234509208725 7.86706899249215 7.24057470575293 6.33001004169225 6.23616448368388 3.98545860527457 5.5872529189202 6.95474328356253 7.61851466471718 7.22756227893638 6.61661516501475 6.83420788771969 7.36250722211825 6.47011290941286 6.76966119960653 5.59234839340968 0.207658251074238 0.21182926035348 0.200417848314914 0.212285936823704 0.200104751410206 0.215727160211095 0.195768426162872 0.196040757076052 0.222450266004987 0.202254191306576 0.204794198288 0.208062169270579 0.205776945399189 0.216991049922236 0.202342522667094 0.201827302951493 0.224178127978209 0.217134089467342 0.198903444301427 5 0|5 /|+ 17633014 17633733 17633407.2 17628199 17634024 + gene protein_coding_gene TRUE TRUE AT5G43810.1 ZLL (ZWILLE) Translation initiation factor. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Identical to Protein PINHEAD (Protein ZWILLE) [Arabidopsis Thaliana] (GB:Q9XGW1;GB:O49256); similar to argonaute protein, putative / AGO, putative [Arabidopsis thaliana] (TAIR:AT2G27880.1); similar to AGO1 (ARGONAUTE 1) [Arabidopsis thaliana] (TAIR:AT1G48410.1); similar to AGO1-1 [Nicotiana benthamiana] (GB:ABC61502.1); similar to ZLL/PNH homologous protein [Oryza sativa (japonica cultivar-group)] (GB:BAB96813.1); similar to ZLL/PNH homologous protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33046.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain Stem cell self-renewal protein Piwi; (InterPro:IPR003165) 0.292075711817010 2.4920362670305 0.0306962161130000 1 2.4850007844302 12.8053430939852 0.292075711817010 0.140302772665310 AT5G46010_at 0.786970923953715 0.631671284681067 0.264797941633778 0.449999466102903 0.803305318332976 0.66350692592845 0.646997714198416 0.553335458146458 1.22454601882253 0.199213702456045 0.311169284575024 0.551394005828677 0.670450718262085 0.579532950430498 0.427363527916426 0.294675804899383 0.297152242437777 0.276362367282306 0.505380554540979 0.192898337646176 0.191387065733120 0.193836421090025 0.192446502882234 0.196989167531167 0.190751298190710 0.195878413947848 0.195755550533702 0.205796189031045 0.192687235348508 0.191601465459811 0.193921936032593 0.195103916735876 0.190751298190710 0.198282386310872 0.196765741928396 0.195337085270654 0.208159356934077 0.193107283442167 5 5|0 +|/ 18677864 18678336 18678144 18677811 18678410 + gene protein_coding_gene TRUE TRUE AT5G46010.1 homeobox-leucine zipper transcription factor family protein similar to WOX8 (WUSCHEL-related homeobox 8), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G45980.1); similar to WOX9B protein [Zea mays] (GB:CAJ84164.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.212574888577298 -2.49193615750447 0.0307015974208807 1 2.48484715283586 1.13460281477749 -0.212574888577298 0.0509656389696021 AT5G52970_at 8.8858250944492 8.69200429003946 8.38539892836812 8.45305095955617 9.71467641915425 8.99903215384088 9.03491456372594 9.12566309877724 9.01179159044984 9.3015557355843 10.1379821846058 10.3740170627999 9.6507796784831 10.0614512676990 10.8727317017860 10.2153209281645 9.5711418839142 9.84547517617821 9.04765497249468 0.105570406902812 0.100403558312073 0.109264877721891 0.113804744904715 0.106391651583881 0.106244526642642 0.104293968300672 0.102809267814747 0.104096357375435 0.0996783801421763 0.100908133070368 0.100909799164830 0.0994749642199768 0.109002739369579 0.0994749642199768 0.0994749642199768 0.105836978030551 0.103256805962019 0.109546340279537 5 5|0 +|/ 21496980 21497997 21497514.143 21496825 21498452 + gene protein_coding_gene TRUE TRUE AT5G52970.1 thylakoid lumen 15.0 kDa protein similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58595.1) -0.280371054039766 -2.4914581393027 0.0307273056787019 1 2.48411358473185 18.5170439809706 -0.280371054039766 0.129793918138359 AT5G46080_at 4.19150788306597 4.06645449299007 5.79756250950692 4.91905129660741 6.11282445855104 4.84345047016391 3.60929898448958 2.79351964747836 3.17259958425231 2.93443493630784 3.62054993686504 3.52289531521637 3.42342318308312 3.84129246523282 3.26014174689918 3.42977033470935 4.33677545641363 3.70292779336008 2.72000425157317 0.233454495788474 0.234184172232186 0.235023274577502 0.240461315260545 0.23942137245809 0.232526517233090 0.23785083073676 0.234845854734331 0.236540821885702 0.24627419401751 0.237997264405386 0.227455314418832 0.229050458177211 0.227455314418832 0.233383784669646 0.227729976582356 0.227455314418832 0.243625279432534 0.236208695248081 5 5 - 18706987 18707525 18707304.455 18706769 18708084 - gene protein_coding_gene TRUE TRUE AT5G46080.1 protein kinase family protein similar to ACR4 (ARABIDOPSIS CRINKLY4), kinase [Arabidopsis thaliana] (TAIR:AT3G59420.1); similar to Os05g0498900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055953.1); similar to Os03g0637800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050726.1); similar to Putative receptor protein kinase CRINKLY4 precursor (GB:O24585); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.504265210491904 2.49078983583636 0.0307632830762333 1 2.48308804709755 7.83399286103177 0.504265210491904 0.302931017537975 AT5G47780_at 9.20375143417972 9.24489489335842 10.0497863395427 10.0181797026399 10.3663392974937 10.2270751656414 9.3619217662352 9.25854580208567 9.27849473604439 9.35480849584955 10.6257926408226 10.3086839216470 10.2313347188087 10.1924517437896 10.4571343907309 10.0317173163539 9.87496758602357 10.2708143227747 9.4537399110126 0.117225488109718 0.112028373014708 0.110116049669141 0.113594656957631 0.114212071350731 0.113514682572543 0.110595050384126 0.113825854606036 0.139737988358122 0.12254346505373 0.112300271713867 0.113928889131738 0.115853773681446 0.121503658696846 0.122322194444503 0.108262936097279 0.122002781677385 0.118471659517760 0.115630920539195 5 5 + 19367064 19367606 19367337.091 19365145 19367895 + gene protein_coding_gene TRUE TRUE AT5G47780.1 GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups Encodes a protein with putative galacturonosyltransferase activity. similar to GAUT1/LGT1 (Galacturonosyltransferase 1), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G61130.1); similar to glycosyl transferase-like protein [Triticum aestivum] (GB:CAJ19325.1); similar to glycosyl transferase-like protein [Brachypodium sylvaticum] (GB:CAJ26362.1); similar to NUDIX hydrolase; Glycosyl transferase, family 8 [Medicago truncatula] (GB:ABE87702.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) 0.203350024405180 2.49063595388464 0.0307715729996749 1 2.48285191633785 19.5220416973576 0.203350024405180 0.0313285595589157 AT5G19590_at 10.6654499131857 10.8364424060582 11.5218504638832 11.5650007680912 11.5361987629557 11.3360510104502 10.6820161736897 10.6011923570071 10.3070764382533 10.3844720413052 11.2121837459473 11.0735756264729 11.2824760094061 11.0645931508330 10.8838142206743 11.2944058124920 11.2661667521742 11.0735963457929 10.3359150111383 0.0778868717539783 0.0792463925214381 0.0776182898962084 0.0786848495531835 0.0799143103589594 0.079481756913425 0.0789717833912735 0.0795904112701804 0.079514512329879 0.081334572807015 0.0794101016116583 0.0776182898962084 0.0794847358140538 0.0832905633944891 0.083006398499141 0.0787851973646526 0.0821689398540734 0.0798817775024948 0.0787355924653201 5 5 - 6611665 6611997 6611843.182 6610732 6612105 - gene protein_coding_gene TRUE TRUE AT5G19590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02360.1); similar to protein of unknown function [Oryza sativa (japonica cultivar-group)] (GB:AAT76982.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO38494.1); similar to Os01g0595400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043469.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.210841549272108 2.48918693411673 0.0308497421484402 1 2.48062853594716 21.8361948760183 0.210841549272108 0.0482360171287778 AT5G27700_at 10.3101462215348 10.5405363047205 10.5820865821650 10.6026722066090 11.0448111548351 10.8954155032301 9.89469945855148 10.3871816362387 10.5811912395533 10.3662865002411 10.9582795383534 11.0010530006779 10.9368623914385 10.8311206631405 10.8456748264390 10.7020461430672 10.1759968312623 10.5313131287151 10.5853072902984 0.0996764769280138 0.0946717430807985 0.0980157262391138 0.0953717353188692 0.0954917222786976 0.095415718560595 0.0987331454825685 0.0946717430807985 0.102832494273749 0.0948817604810602 0.100772444234071 0.0963398665708994 0.098687360614009 0.100197451453885 0.0977468128413083 0.0958408762568153 0.108739388200062 0.100583965588918 0.0969876139254598 5 5|0 -|/ 9807573 9808019 9807817.6 9807305 9808510 - gene protein_coding_gene TRUE TRUE AT5G27700.1 40S ribosomal protein S21 (RPS21C) Identical to 40S ribosomal protein S21-2 (RPS21C) [Arabidopsis Thaliana] (GB:Q3E902); similar to 40S ribosomal protein S21 (RPS21B) [Arabidopsis thaliana] (TAIR:AT3G53890.2); similar to Ribosomal protein S21e [Medicago truncatula] (GB:ABD28456.1); contains InterPro domain Ribosomal protein S21e; (InterPro:IPR001931) -0.247403024659957 -2.48657667733900 0.0309910476477973 1 2.47662394583389 21.1615544628611 -0.247403024659957 0.0976434950450854 AT5G36870_at 2.84159437407908 3.12312697153818 3.28224633597411 3.47850947930822 3.01945303501737 3.35286789497269 3.20243644266211 3.01316021630003 2.88143881946486 3.18321663345379 3.19314014696375 3.33499563449412 3.42224951780739 3.05236693990771 3.18450670156906 3.15131584498569 3.2744278192336 3.35145041666954 2.94968157040731 0.193352927352672 0.197335627155823 0.193352927352672 0.197804281273901 0.203169143755317 0.203305375842737 0.194999085264467 0.199566181883029 0.209684964142864 0.195928359306510 0.209201916662564 0.19812670860126 0.199775449471058 0.194718548646881 0.209954978364845 0.193352927352672 0.202870681714041 0.194991397325754 0.200900050002334 5 5|0 +|/ 14550101 14551133 14550797.5 14535546 14551160 + gene protein_coding_gene TRUE TRUE AT5G36870.1 ATGSL09 (GLUCAN SYNTHASE-LIKE 9); 1,3-beta-glucan synthase encodes a gene similar to callose synthase similar to ATGSL07 (GLUCAN SYNTHASE-LIKE 7), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G06490.1); similar to ATGSL03 (GLUCAN SYNTHASE-LIKE 3), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G31960.1); similar to ATGSL11 (GLUCAN SYNTHASE-LIKE 11), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G59100.1); similar to putative callose synthase 1 catalytic subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD23015.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93351.1); similar to Glycosyl transferase, family 48 [Medicago truncatula] (GB:ABE81550.1); contains InterPro domain Glycosyl transferase, family 48; (InterPro:IPR003440) -0.239575355820529 -2.48526754747501 0.0310621559533077 1 2.47461580179072 6.28934216147106 -0.239575355820529 0.0890468043338601 AT5G61420_at 9.71475122132673 9.5467883119926 10.6276635092909 10.5344274044085 10.9837414804583 10.6033101110394 10.7156998013091 10.2701818796848 8.88589902270594 10.3192765063819 11.0211342514255 10.9242892002417 10.9002761630983 11.1996426526181 10.3765719458824 11.0297588777415 10.9318180182473 11.0225896739947 10.1140539720856 0.105728075462783 0.103736701910887 0.0998516495725075 0.100397150294839 0.103147364613282 0.102858459830989 0.105781977899739 0.0989944609668542 0.127380975130778 0.098819960929608 0.101191738423051 0.100309136934198 0.100133614139465 0.102960518623295 0.106799950934848 0.098819960929608 0.104204617633794 0.104333484436252 0.103311968584411 5 5 - 24706714 24707228 24706968 24706377 24708321 - gene protein_coding_gene TRUE TRUE AT5G61420.1|AT5G61420.2 MYB28 (myb domain protein 28); DNA binding / transcription factor Encodes a putative transcription factor (MYB28). similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to PH4 [Petunia x hybrida] (GB:AAY51377.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to MYB29 (myb domain protein 29), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07690.1); similar to MYB1 [Dendrobium sp. XMW-2002-1] (GB:AAO49410.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.2553984228247 2.48082041240522 0.0313049094514362 1 2.46779556201826 20.7239887640875 0.2553984228247 0.106694727202962 AT5G18090_at 1.56597743693223 1.47658211365599 2.08822251648270 1.54252016162104 1.62583187183422 1.42903680401582 1.52135773007291 1.73060525839723 1.80763203396245 2.39355564803549 1.8383883518405 1.83670361794717 1.82391661456343 2.18168115517960 1.69553416281451 1.7907836195009 2.24239557458628 1.82236982449802 2.46823544366755 0.193815683939617 0.193714216505271 0.194466488486825 0.197709950491283 0.197094589553823 0.19021061420596 0.190327755425822 0.191551279154831 0.196946823570352 0.188543763722229 0.193695639815684 0.188501092274326 0.198253393360149 0.191017544436472 0.197919485823666 0.188572185082396 0.193312309853145 0.196248355188078 0.190967592656333 5 5|0 +|/ 5986141 5986880 5986529.9 5985367 5987167 + gene protein_coding_gene TRUE TRUE AT5G18090.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G18000.1); similar to Transcriptional factor B3 [Medicago truncatula] (GB:ABD32483.1); similar to OSIGBa0111I14.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66511.1); similar to OSJNBa0020I02.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE02098.2); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.256509043905370 -2.48079781443176 0.0313061477350277 1 2.46776091097105 3.68607306512892 -0.256509043905370 0.107836165562723 AT5G53060_at 3.41829811930376 3.69002068583177 4.71678376781857 4.54683712054103 5.25162348579758 4.64849015559417 3.79773808623843 3.60327459247633 3.08763325784922 3.45252728457811 4.26986439182257 4.45642409823832 4.36766391680606 4.19414601830886 4.13728699962947 5.00516835091535 3.95178211533052 4.08850999358153 3.73977622285335 0.233244390109018 0.242308115855221 0.237220386952564 0.23778382701238 0.231502780087673 0.236152042176719 0.231832865580216 0.233968111925159 0.244373769764737 0.239032450860277 0.236226404181880 0.233707139546229 0.235763202237179 0.241536172423002 0.243005189629552 0.237068642646911 0.238421098546717 0.243969996515361 0.240247879070088 5 5 + 21534395 21535265 21534828.5 21532252 21535663 + gene protein_coding_gene TRUE TRUE AT5G53060.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G15270.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE93137.1); similar to Os06g0342500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057572.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, prokaryotic type; (InterPro:IPR009019); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.271771445978962 2.48046089282538 0.0313246154648942 1 2.46724429256012 8.0768839137032 0.271771445978962 0.122893290068405 AT5G64600_at 5.21752948881896 5.05620573413333 6.1153285018082 6.11249888987994 6.65051636938296 6.39895809840599 5.40374934015843 4.85365951299275 4.70829979718532 4.99975910221532 6.33692578917404 6.28295513110751 6.07583779004172 6.23820610235687 5.85115906830517 6.27071719771079 6.13142524224554 6.05968251516295 4.81205567951179 0.202896013856967 0.19908894248898 0.199278742811316 0.192702573861696 0.197424765028203 0.19655879317597 0.196897010206826 0.204041449773921 0.200117853005996 0.209866171946087 0.192060167635611 0.192060167635611 0.198492450869142 0.194893068310459 0.199037734724499 0.192292846236552 0.196875907338688 0.195293815090854 0.193855310238797 5 5|0 +|/ 25844305 25845057 25844555.2 25842393 25845411 + gene protein_coding_gene TRUE TRUE AT5G64600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22460.1); similar to Os12g0190100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066339.1); similar to putative auxin-independent growth promoter [Oryza sativa (japonica cultivar-group)] (GB:BAD37235.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) 0.256777112004422 2.4786462304717 0.0314242666919836 1 2.46446200670867 11.2240066406895 0.256777112004422 0.108337436240926 AT5G28650_at 2.72336738869655 2.98998975060799 3.20330895806831 3.58063360380024 2.63273683016578 2.86768602198194 2.31852587307611 3.05982035445608 3.24306392938543 3.24035818690728 3.21632424881809 3.16082801421263 3.23063686620236 3.54708936057737 3.34091435480173 3.36589334250956 3.57384529017739 3.42373426871664 3.48760166677213 0.212854148854781 0.216312438936422 0.220828712467376 0.215591789573760 0.227732744134330 0.219385679821374 0.224932498673149 0.229170655701289 0.221069814892106 0.213361397178636 0.222414017455271 0.214651331393238 0.214586057159032 0.218723110726929 0.215410577108928 0.214301990015468 0.224757259034162 0.221820956655040 0.217966546911904 5 5|0 -|/ 10677795 10678504 10678181.2 10677720 10679208 - gene protein_coding_gene TRUE TRUE AT5G28650.1 WRKY74 (WRKY DNA-binding protein 74); transcription factor member of WRKY Transcription Factor; Group II-d Identical to Probable WRKY transcription factor 74 (WRKY DNA-binding protein 74) (WRKY74) [Arabidopsis Thaliana] (GB:Q93WU6;GB:Q8VWY9); similar to WRKY39 (WRKY DNA-binding protein 39), transcription factor [Arabidopsis thaliana] (TAIR:AT3G04670.1); similar to WRKY DNA binding domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99243.1); similar to Os12g0597700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067197.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) -0.309111770431730 -2.47820806169722 0.0314483750562181 1 2.46379025233256 6.26255000391008 -0.309111770431730 0.156533659474248 AT5G06850_at 4.25152796127009 4.67448765724627 5.1193090099138 5.19497802787359 5.0633776333019 5.34797105293912 4.23007091906554 4.57404281786682 4.6021759596863 4.65387486770752 5.20982375408658 5.3867479048775 5.45080479887737 5.30189218664791 4.40126130484874 5.50051131621147 5.6734222403763 5.66972766653869 4.99562410203705 0.223547532103157 0.205181849379939 0.218259159337504 0.207970510893866 0.218435057090975 0.212649083644908 0.21359623610739 0.212936346982025 0.236226637887021 0.225359537262172 0.205644799338914 0.224437305001855 0.216655068104462 0.219120741303360 0.226285408516086 0.209449915192846 0.216466282494903 0.212823515523145 0.238672874988103 5 5 - 2127293 2127743 2127516.273 2126976 2129325 - gene protein_coding_gene TRUE TRUE AT5G06850.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48060.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to H0305E08.5 [Oryza sativa (indica cultivar-group)] (GB:CAH67434.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to C2 [Medicago truncatula] (GB:ABE85066.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.255438587097304 -2.47617408081908 0.0315605238639671 1 2.46067225770129 9.84438673811882 -0.255438587097304 0.107228388012819 AT5G39100_at 2.57497196755215 2.44052050908279 4.04903189971913 3.56661229597874 2.68344551218718 2.74600681833838 1.98822695758582 2.2683546199888 2.33778695309569 2.42074493915795 2.50204771719404 2.24679049900973 2.46479605051204 2.50537837644225 2.62073517287976 2.85522530730544 2.54060190486973 2.38295958918135 2.28235111837458 0.217129055484672 0.21586507441235 0.223102294260517 0.220756396223136 0.21586507441235 0.221443527020472 0.21586507441235 0.219239072328577 0.216215927183646 0.217284198391774 0.21586507441235 0.221383295864214 0.223430426045593 0.219468854439541 0.21586507441235 0.216926897616161 0.223288548705563 0.223533563445463 0.218888363022678 5 5 - 15670443 15670773 15670633.273 15670318 15671248 - gene protein_coding_gene TRUE TRUE AT5G39100.1 GLP6 (GERMIN-LIKE PROTEIN 6); manganese ion binding / metal ion binding / nutrient reservoir germin-like protein (GLP6) Identical to Germin-like protein subfamily 1 member 13 precursor (GLP6) [Arabidopsis Thaliana] (GB:P92997); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39110.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39120.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) 0.247615701658409 2.46787369710874 0.0320222655700519 1 2.44795318765821 5.22053523791264 0.247615701658409 0.0998918669245394 AT5G02020_at 7.18158280593983 7.22911568445723 9.1396188941607 9.09354806973355 9.78401593970144 9.33883358745138 8.47664218212914 8.37383084663166 7.55336477509037 6.57467988123873 6.10395125737317 7.01543819223945 7.60097216858136 6.83692023182938 5.96142941803713 8.26679476457794 8.0233474648078 6.61922583787361 7.34454021365543 0.197316050062339 0.197316050062339 0.205299832293172 0.204546674130333 0.220386623153586 0.217556557419494 0.207970155163277 0.201115658203263 0.198327278295152 0.204187628057873 0.209041182760293 0.201115239822313 0.197316050062339 0.205277514960139 0.207480871257938 0.197316050062339 0.224297146986990 0.207360055281826 0.208336124823938 5 5|0 -|/ 386673 387881 387313.556 386079 388120 - gene protein_coding_gene TRUE TRUE AT5G02020.1|AT5G02020.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59080.1) -0.230276866762732 -2.46768310760971 0.0320329452451196 1 2.44766123391182 15.6826676047305 -0.230276866762732 0.0798941848691862 AT5G12180_at 1.80119288534723 1.60303479833122 2.11194833560027 1.98526820586375 1.52242066592476 1.81211178525763 1.61579859658583 1.92192045137010 2.7233847607074 1.87223587881777 1.68547807825797 1.87201263833983 1.96986279536547 1.79929198098642 1.91966693138902 2.27714199232358 1.65810228635298 2.18827872717682 1.98784091290521 0.191972081296312 0.185411556642125 0.191471554884995 0.191387620783091 0.192910953441662 0.185411556642125 0.18632745800593 0.189164266390526 0.194284639727127 0.193285932787967 0.194311328111433 0.185411556642125 0.185963133327045 0.1925494535387 0.189220044384466 0.194081874677205 0.195375472109504 0.194422843285871 0.190827292216973 5 5|0 +|/ 3938442 3939282 3938776.5 3937025 3939597 + gene protein_coding_gene TRUE TRUE AT5G12180.1 CPK17 (calcium-dependent protein kinase 17); calcium- and calmodulin-dependent protein kinase/ kinase member of Calcium Dependent Protein Kinase similar to CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), anion channel/ calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G23650.1); similar to CPK21 (calcium-dependent protein kinase 21), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK34 (calcium-dependent protein kinase 34), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19360.1); similar to EPS15 homology (EH); Protein kinase [Medicago truncatula] (GB:ABE77685.1); similar to calcium-dependent protein kinase 17 [Nicotiana plumba (GB:CAG27840.1); similar to calcium-dependent protein kinase 1 [Petunia inflata] (GB:AAZ76712.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.232989389944257 -2.46521182825469 0.0321717396779121 1 2.4438760068222 3.85457027199384 -0.232989389944257 0.0835239361766155 AT5G09830_at 7.93443650455076 7.7117699909075 8.66699888329864 8.79702529569719 8.86352429588139 8.73264312007293 7.36053225174413 7.37704798651741 7.23692780138285 7.46459787507294 8.5961641024797 8.7062648345086 8.0324104336673 8.31489702246902 8.14706716987064 8.61103293936129 8.45286678201535 8.05637207456369 7.14109495053109 0.161940897693116 0.161784798404166 0.171247324270348 0.164261313139956 0.166707067738410 0.158423081618205 0.165254618040073 0.172631457656355 0.172565937674593 0.170233553338272 0.159380048069873 0.158423081618205 0.176006813021565 0.163703147556617 0.166518530660938 0.158423081618205 0.175157964400771 0.163602147369047 0.181104208825924 5 5|0 -|/ 3057826 3058736 3057997 3057647 3058822 - gene protein_coding_gene TRUE TRUE AT5G09830.1 BolA-like family protein similar to ATSUFE/CPSUFE/EMB1374 (EMBRYO DEFECTIVE 1374), enzyme activator/ transcription regulator [Arabidopsis thaliana] (TAIR:AT4G26500.1); similar to Os01g0866600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044908.1); similar to hypothetical protein MG11028.4 [Magnaporthe grisea 70-15] (GB:XP_359957.1); contains InterPro domain BolA-like protein; (InterPro:IPR002634) 0.209744159202289 2.46421012864195 0.0322281657726125 1 2.44234192431652 16.0032512721817 0.209744159202289 0.0501231245180352 AT5G13300_at 5.7082992593146 6.37157838423962 6.80965922637664 6.76682522393474 7.4930377237557 6.73836320978771 4.74749300393908 4.80489308313484 4.98833797611978 5.06528283622895 6.27409946653029 6.33680756251487 6.03985052552854 6.29493678873941 6.39168868899923 6.33262732766064 5.88458546809847 6.58088408329488 5.26396698483025 0.262572638924585 0.257581242233150 0.263152673393257 0.277591945824966 0.274652447905096 0.265555061624204 0.267663447078081 0.259294774440111 0.28681159728303 0.258409014712156 0.260064729487378 0.256111183488684 0.261070226541863 0.266531679761906 0.261361890230521 0.260598211225642 0.283341517765435 0.271859068446904 0.267252536142283 5 5|0 -|/ 4255949 4256580 4256332.1 4255604 4262317 - gene protein_coding_gene TRUE TRUE AT5G13300.1 SFC (SCARFACE, VASCULAR NETWORK DEFECTIVE 3) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. similar to ARF GTPase-activating domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G60860.1); similar to AGD4 (ARF-GAP DOMAIN 4), protein binding [Arabidopsis thaliana] (TAIR:AT1G10870.1); similar to AGD1 (ARF-GAP DOMAIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G61980.1); similar to Os09g0510700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063635.1); similar to putative ARF GTPase-activating domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01238.1); similar to Os08g0537600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062366.1); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain BAR; (InterPro:IPR004148); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 0.328324815871928 2.46215285256059 0.032344357037033 1 2.43919162610782 11.8664174333006 0.328324815871928 0.174313586222162 AT5G27820_at 4.99129035361907 5.12877229654613 4.86326709903948 4.72858653174351 4.73148009833328 5.20365022301758 4.45039118233264 4.55222466766997 3.91237486820516 4.64142380273365 5.87287812295472 6.43483923861592 5.18202652859184 5.48734120940243 6.39384692165191 5.71706593849978 5.49571929888353 5.02844279360726 4.75625855351623 0.214035385125247 0.213381313038499 0.209533283011403 0.218442570660903 0.209533283011403 0.213718264964808 0.209811793116050 0.217929593831353 0.230798882713494 0.215053507370222 0.217059857307387 0.210551839389044 0.209533283011403 0.215136337877529 0.22737345415889 0.209533283011403 0.211437584806011 0.209533283011403 0.218508635047289 5 5 + 9860592 9860880 9860735.909 9859858 9861133 + gene protein_coding_gene TRUE TRUE AT5G27820.1 ribosomal protein L18 family protein similar to 50S ribosomal protein L18 family [Arabidopsis thaliana] (TAIR:AT3G20230.1); similar to ribosomal protein L18 family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98333.1); similar to Os03g0694800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050972.1); similar to Os01g0256600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042627.1); contains InterPro domain Ribosomal protein L18P/L5E; (InterPro:IPR005484) -0.237736372784899 -2.45784411488372 0.0325890378205323 1 2.43259533273203 9.90031068054317 -0.237736372784899 0.089980907842025 AT5G17980_at 0.854384061792632 1.02310854461797 1.27271949824958 1.15055108071731 1.51321785418874 1.06179550681172 1.57893829657024 1.39869341442651 1.45578315435538 1.22629752311021 1.77413249079276 1.95025596915828 2.10491812181743 1.53643719120967 1.67692254933989 1.97417801874986 1.37423144638814 1.95089617664814 0.82338323335409 0.190283932224410 0.191162336418324 0.192582170781626 0.188465613141235 0.186688448575970 0.193265902689275 0.186679871923031 0.188197609739867 0.186679871923031 0.195481910905200 0.186679871923031 0.186717473167031 0.191331309317240 0.187350198181683 0.196505042681879 0.187542570563910 0.191549507862626 0.188581496723955 0.190726715522223 5 5 + 5956184 5956700 5956457.727 5953598 5956747 + gene protein_coding_gene TRUE TRUE AT5G17980.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G03680.1); similar to NTRB (NADPH-dependent thioredoxin reductase B) [Arabidopsis thaliana] (TAIR:AT4G11610.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G74720.1); similar to putative phosphoribosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAB89913.1); similar to putative phosphoribosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAP68393.1); similar to putative anthranilate phosphoribosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAC79748.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.239062514045806 2.45775069884845 0.0325943626715105 1 2.43245234611022 2.71229326506496 0.239062514045806 0.0915168672674791 AT5G22710_at 3.37665362747699 2.87896198855801 3.83257829535147 3.19669209712406 4.84007427556885 4.32153982530981 3.49935703842385 3.06999881215434 2.58379361149907 2.95691129153029 4.05298598682018 4.06137903419474 4.19158086011671 3.53917447657022 3.57519173998846 4.21260950391822 3.52666180089479 3.3416663415644 2.88567564812506 0.221892982125503 0.224587435532087 0.233499792825938 0.222903491140328 0.232842742737512 0.25063525981556 0.228639904817378 0.224707624824016 0.226376077278866 0.224020522906027 0.22816278594111 0.223926911126670 0.221814846125459 0.228307138553983 0.233102712249048 0.224170454820173 0.229498831149586 0.228307491825381 0.232828373062776 5 5 - 7547888 7548522 7548215.727 7547800 7549372 - gene protein_coding_gene TRUE TRUE AT5G22710.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22670.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596) 0.336977995790574 2.45711446274544 0.0326306517275549 1 2.43147852397411 6.93770686252589 0.336977995790574 0.181935906911053 AT5G48640_at 5.71028330875146 5.92894957565223 6.66939352681574 7.20563786621937 7.62246251393692 7.15276205739902 6.30083984317822 5.86245669022446 5.16364528716317 4.73945069751157 6.25260260665886 6.23319472737538 6.44102564405478 6.62990250018496 6.62476779880077 6.62048068468432 6.68249144605344 6.312245099601 5.13128796466183 0.212516992837744 0.219483540923201 0.226848302047030 0.223817950089902 0.229647238368273 0.212516992837744 0.216041450133739 0.216690574689764 0.238956067828749 0.226678362236231 0.217774936591627 0.223060470785863 0.212516992837744 0.215392089068245 0.230188354689161 0.217943381544898 0.214842706480579 0.212900376332741 0.230599478142420 5 5 - 19740891 19741975 19741491.222 19740759 19742915 - gene protein_coding_gene TRUE TRUE AT5G48640.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48630.1); similar to G1/S-specific cyclin C-type (GB:P93411); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.298563436409517 2.45704540042926 0.0326345932202950 1 2.43137282026079 12.2996232377083 0.298563436409517 0.149686905949727 AT5G63670_at 9.5766990113480 9.54206009159996 10.1663755902512 10.1991005337381 10.3224689392756 10.1294978891165 9.65570189844827 9.68383134460154 9.41654143470912 9.34697811513858 9.82716863033423 9.80776515647882 9.80223327299054 9.77380655195052 9.8922407420084 10.0738315134958 9.5997353947454 9.56666442259715 9.45738279027564 0.0990298190663988 0.0987618829408928 0.100353285116294 0.0981131734396645 0.103696917569438 0.101329715933810 0.095703694325324 0.0936548729757483 0.108952302695002 0.094866234035779 0.100458061842219 0.0938269398834082 0.0967254065067466 0.097158836729 0.0963628820473357 0.093889061629872 0.110759628587004 0.101554468297346 0.0972008040932766 5 5|0 +|/ 25505253 25506438 25505581.571 25505207 25506654 + gene protein_coding_gene TRUE TRUE AT5G63670.1 transcription initiation protein-related Identical to Transcription elongation factor SPT4 homolog 2 [Arabidopsis Thaliana] (GB:Q94C60;GB:Q9FFP7); similar to positive transcription elongation factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G08565.1); similar to Transcription elongation factor SPT4 homolog 1 (GB:Q8LCQ3); contains InterPro domain Transcription initiation Spt4; (InterPro:IPR009287) -0.201825345994304 -2.45631099674353 0.0326765356131769 1 2.43024881070141 19.5094159909388 -0.201825345994304 0.0347404246857586 AT5G07830_at 10.2955918718088 10.3820251330956 11.3291748294150 11.2818964572384 11.2550963808570 11.0904923800781 9.28613520464804 9.25620031242237 9.83978629477666 9.48179928566363 9.6973267957007 9.28605270903796 9.72207649062551 9.76141938539164 9.36226732590201 10.0500230810781 10.079860371835 9.89308084690881 9.00304589754047 0.0845375942260263 0.086144986788321 0.0836080249185066 0.0857563063049616 0.0887462616254913 0.0852472090792791 0.0863415356047018 0.0850237706332795 0.0908625882822842 0.0868853496821197 0.0860337786189123 0.0856758964615436 0.087751605600151 0.0855211142639703 0.085661596150546 0.0847745594514788 0.0876679041660526 0.085509005095101 0.0918704635173784 5 5|0 +|/ 2505821 2506535 2506259.667 2503324 2506689 + gene protein_coding_gene TRUE TRUE AT5G07830.1 glycosyl hydrolase family 79 N-terminal domain-containing protein Identical to Heparanase-like protein 1 precursor (EC 3.2.-.-) [Arabidopsis Thaliana] (GB:Q9FF10;GB:Q9SDA1); similar to glycosyl hydrolase family 79 N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G61250.1); similar to Os03g0211700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049350.1); similar to putative heparanase [Hordeum vulgare subsp. vulgare] (GB:CAD42650.1); similar to Os12g0578400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067122.1); contains InterPro domain Glycoside hydrolase family 79, N-terminal; (InterPro:IPR005199) 0.201275814298807 2.45498764171061 0.0327522467605705 1 2.42822357421872 20.1086051720972 0.201275814298807 0.0335995904511832 AT5G42830_at 5.998784759321 6.31972030439699 7.82802713963807 7.96782895681303 6.09147263081823 6.06291200714971 2.62096268385234 2.6309417496767 4.62815566799315 3.44319210053599 3.45683146392658 4.00639102906484 3.04380264442038 3.19259241004326 3.28615732405646 3.20873862459089 3.55609017068027 3.50280572371259 3.39992649741294 0.355481743910742 0.354727699720629 0.353730472169319 0.357331938814113 0.370099664161026 0.362393791097864 0.345938221397954 0.351718246786692 0.352771842466403 0.346189465306795 0.344946017815792 0.355595721500401 0.351572481277426 0.344913758475001 0.348071757618625 0.344913758475001 0.348445855639689 0.344991210965535 0.344913758475001 5 5 + 17194555 17195110 17194785.909 17193612 17195246 + gene protein_coding_gene TRUE TRUE AT5G42830.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07850.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.215199016711344 2.45357524994275 0.0328332412757716 1 2.42606231518398 9.30529841018789 0.215199016711344 0.0608058690782265 AT5G49440_at 3.33579120243693 3.62322291387043 3.52240223339634 3.76645298503779 4.01635564583693 3.80885480968444 3.94438671918268 3.2517408415682 2.85762666491365 3.48207295083691 3.89644036275823 3.80066849688607 3.81673591967788 3.54538943062633 3.5855161405083 3.56987781734942 3.37339204981436 3.36939209173100 3.31060877968048 0.267207179614626 0.271683911868535 0.277971888570995 0.280938963809796 0.317651346163947 0.279213789093622 0.305864669597642 0.270841545081635 0.28275613743294 0.274719486403373 0.272982452390137 0.273397128892714 0.267207179614626 0.267633389705784 0.282451153426967 0.272013492203396 0.268992862682677 0.273878846847280 0.268349008208453 5 5 + 20066247 20066657 20066400 20065465 20066823 + gene protein_coding_gene TRUE TRUE AT5G49440.1 unknown protein -0.288014996127465 -2.44963974842642 0.0330599606953399 1 2.42004146401537 7.07687392078303 -0.288014996127465 0.141121029517595 AT5G17360_at 1.91867852740364 1.68421241669398 2.21779228963584 2.16440747193805 2.24870341562291 2.25692198359812 1.99699657035497 1.89576955506241 1.88449330633791 1.63441136948815 2.10050594708727 2.36085750425791 2.45519204347252 1.98389084047724 1.82940418017719 2.36364121766008 2.46385411943932 1.88307143414045 1.80517697863944 0.178316968126513 0.172406225182471 0.177016802516311 0.175051074017962 0.176849506177600 0.172989505446256 0.174977272179242 0.168055521737025 0.172702992435874 0.177377560528596 0.176292191280295 0.174451667875908 0.172403071923749 0.169559901890424 0.174180267097445 0.172627670151619 0.180177761913019 0.183000437817102 0.172942166299471 5 5 + 5720635 5721109 5720914.909 5720378 5721661 + gene protein_coding_gene TRUE TRUE AT5G17360.1 similar to ATP dependent DNA ligase family protein [Arabidopsis thaliana] (TAIR:AT1G66730.1); similar to ATP-dependent DNA ligase; DNA repair metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase [Medicago truncatula] (GB:ABE93666.1) 0.205919677217034 2.44961367021526 0.0330614681268803 1 2.42000157385658 4.02530830161915 0.205919677217034 0.0451731511664044 AT5G60010_at 2.25692129545809 2.35683442308838 2.3697374752697 2.63950407707802 1.78692427430552 2.51850584391576 2.15657967846246 1.96855394682597 2.72852642742817 2.72056117665991 2.53386172317402 2.02467934877133 2.40609215372680 2.7463784090564 2.59808384808957 2.40637700888738 2.35241395778098 2.45434152068552 2.49881452715595 0.189333402850783 0.193881194980063 0.182180744333911 0.187050358591987 0.187311099902260 0.193884211806479 0.184233632935438 0.189210123414044 0.200185358774519 0.184226124204445 0.185949598858435 0.187537969432181 0.182974885196004 0.188074332953984 0.196397459211652 0.189494825264871 0.192812681005075 0.190953860917090 0.186532364326965 5 5|0 +|/ 24180601 24181419 24180959.6 24177682 24181631 + gene protein_coding_gene TRUE TRUE AT5G60010.1 ferric reductase-like transmembrane component family protein similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to ATRBOH F (RESPIRATORY BURST OXIDASE PROTEIN F), NAD(P)H oxidase [Arabidopsis thaliana] (TAIR:AT1G64060.1); similar to ferric reductase-like transmembrane component family protein [Arabidopsis thaliana] (TAIR:AT3G45810.1); similar to putative respiratory burst oxidase [Oryza sativa (japonica cultivar-group)] (GB:BAD73392.1); similar to NOX1 [Striga asiatica] (GB:ABG35770.1); similar to respiratory burst oxidase protein A [Zea mays] (GB:ABH85405.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916); contains InterPro domain NADPH oxidase Respiratory burst; (InterPro:IPR013623) -0.286387042571094 -2.4475186836837 0.0331827872330962 1 2.41679728533142 4.80148473014358 -0.286387042571094 0.139877197765923 AT5G41870_at 5.43169482085496 6.01466266593907 6.56259967482534 6.70721876840955 6.95424906684615 6.94986790955794 5.61130338565739 5.6026529885026 4.76089434754164 5.10273417888626 6.36203855863692 6.92282796755018 6.47603857284413 6.45715582683284 6.38150859933616 6.55842756744417 7.2031925357029 6.3347439034327 5.58985946376582 0.207794870710400 0.209713277696381 0.219881998863402 0.205844721819940 0.208025603283073 0.210377968149946 0.202932639970101 0.205303116811468 0.222049903550652 0.216972931428295 0.202932639970101 0.202932639970101 0.202932639970101 0.205594805488749 0.213791735363295 0.216518996665460 0.219654635987731 0.212245625062719 0.225656388116617 5 5 - 16776083 16776619 16776348.091 16775937 16777804 - gene protein_coding_gene TRUE TRUE AT5G41870.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT4G23820.1); similar to Os05g0587000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056466.1); similar to Os02g0256100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046468.1); similar to putative polygalacturonase [Oryza sativa (japonica cultivar-group)] (GB:AAT44156.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat; (InterPro:IPR006626) 0.249188173349119 2.44578544594438 0.0332834868768169 1 2.41414670819974 12.0983583375093 0.249188173349119 0.103956777717456 AT5G18550_at 3.77684819420407 3.39866534169342 3.31054131440827 3.56897362532616 3.92790405481261 3.34625816446934 4.03829654656933 3.73376753296059 4.08869631914751 3.09250652362243 4.35078737735143 4.68233355725628 4.23956180403590 4.8217191180917 4.83771455922445 4.14026556979687 4.18010811942021 4.92794430675303 3.30963724275553 0.233938198871554 0.229854918797831 0.237602691426592 0.236810618174321 0.233727452749805 0.242874040581597 0.234464943376990 0.233912454170977 0.237139563011143 0.247784436535035 0.234684437057854 0.229854918797831 0.229854918797831 0.231088081880142 0.229854918797831 0.229854918797831 0.235497349146606 0.229854918797831 0.236665333877249 5 5 + 6162011 6162651 6162360.455 6160180 6163132 + gene protein_coding_gene TRUE TRUE AT5G18550.1 nucleic acid binding Identical to Zinc finger CCCH domain-containing protein ZFN-like 3 [Arabidopsis Thaliana] (GB:Q6NPN3); similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G06410.1); similar to Os01g0258700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042637.1); similar to Os01g0257400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042632.1); similar to Zinc finger CCCH domain-containing protein ZFN-like 3 (GB:Q5NAV3); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) -0.284665968916803 -2.44544310319374 0.0333034120261230 1 2.41362322059021 7.64740734513867 -0.284665968916803 0.138536650894184 AT5G04590_at 10.4175221734650 10.5470102287603 10.8905407522486 10.8586619195429 10.6831382530187 10.5330277020275 11.0318384066934 11.0308632686847 9.9789162070349 10.6707315301623 11.4171249421239 11.2775714829522 11.1059577503679 11.1305532021194 10.8877099616285 10.8617912175057 10.8892920853291 11.4413871902380 10.2763642773999 0.0961374698833444 0.0898353647612893 0.0968619499676688 0.091072545353991 0.0906787390690107 0.0998376215127758 0.0926074592694509 0.0914949379821926 0.0939585342511486 0.0941275391652591 0.088420851131149 0.0888463621042643 0.0880217580221571 0.0967455903455575 0.0898471106776046 0.090259453994058 0.0970026532120928 0.0889436637844619 0.0906839519332722 5 0|5 /|+ 1321554 1322049 1321760.444 1319357 1322525 + gene protein_coding_gene TRUE TRUE AT5G04590.1 SIR (sulfite reductase); sulfite reductase (ferredoxin) A.thaliana gene encoding sulfite reductase. similar to NIR1 (NITRITE REDUCTASE), ferredoxin-nitrate reductase [Arabidopsis thaliana] (TAIR:AT2G15620.1); similar to sulfite reductase [Pisum sativum] (GB:BAD12837.2); similar to Sulfite Reductase [Nicotiana tabacum] (GB:BAA33531.1); similar to sulfite reductase, ferredoxin dependent [Asparagus officinalis] (GB:ABB55339.1); contains InterPro domain Nitrite/sulfite reductase, flavoprotein alpha-component, domains 1 and 3; (InterPro:IPR011255); contains InterPro domain Ferredoxin-nitrite reductase; (InterPro:IPR008287); contains InterPro domain Nitrite and sulphite reductase 4Fe-4S region; (InterPro:IPR006067); contains InterPro domain Sulfite reductase, ferredoxin dependent; (InterPro:IPR011787); contains InterPro domain Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; (InterPro:IPR005117); contains InterPro domain Nitrite and sulfite reductase iron-sulfur/siroheme-binding site; (InterPro:IPR006066) -0.200850203643835 -2.44440681937546 0.0333637973129263 1 2.41203869477096 21.4666224133379 -0.200850203643835 0.0347480427280128 AT5G14180_at 1.91768334888847 1.98622648517312 1.57451230099712 1.63846061015596 3.38869303210873 2.95957211938387 1.18691827660256 0.919545992507176 1.81812024143373 1.35605814334248 1.21468994343135 1.07306965565110 1.27717226382763 1.24897535113634 1.33363567416017 1.49087796381930 1.15994907761277 1.63710232824658 1.25244152454307 0.237748528681397 0.245144550436920 0.234796690442443 0.238231974216450 0.330748293262617 0.31911951646514 0.236477379350181 0.23117945212519 0.240801175610661 0.232515075095854 0.232413021774413 0.232925055899941 0.230539703277544 0.230031533189179 0.231432869437717 0.227971568270697 0.233807158391145 0.229858057305871 0.230604644812278 5 5|0 -|/ 4571449 4574378 4573054.105 4571339 4574464 - gene protein_coding_gene TRUE TRUE AT5G14180.1 lipase family protein Identical to Triacylglycerol lipase 2 precursor (EC 3.1.1.3) (LIP2) [Arabidopsis Thaliana] (GB:Q67ZU1;GB:Q681B0;GB:Q6VY31;GB:Q94AE7;GB:Q9FMT2;GB:Q9FMT3); similar to ATLIP1 (ARABIDOPSIS THALIANA LIPASE 1), galactolipase/ hydrolase/ phospholipase/ triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT2G15230.1); similar to lipase [Ricinus communis] (GB:AAY17358.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain AB-hydrolase associated lipase region; (InterPro:IPR006693); contains InterPro domain Lipase, active site; (InterPro:IPR008262) 0.235582877592447 2.44437305352609 0.0333657666830842 1 2.41198706750666 3.3364385217315 0.235582877592447 0.0889878386454439 AT5G42890_at 9.64858970624504 9.6445525612641 10.4672585043552 10.4505077624764 10.6223604803442 10.3413284060839 9.4485315826753 9.26556271395025 8.94047573740909 9.43876024043449 10.0622150834922 9.93993425704883 9.9193458382303 10.1220829700802 10.0526446746074 9.79361059985411 9.95280853905024 10.3172168215843 9.19695007867721 0.0763253442814537 0.076584842253312 0.0759871784771565 0.0776704270193606 0.0763330551365633 0.080473031302515 0.0796212131063577 0.0803619425297672 0.0919650941736855 0.0816232400477809 0.0786051411171577 0.0754494710560887 0.0754494710560887 0.0761193965685113 0.0774727430842396 0.0754494710560887 0.0769219773997825 0.0779428975568074 0.0836419107342542 5 5|0 -|/ 17211691 17213103 17212537.4 17211425 17213260 - gene protein_coding_gene TRUE TRUE AT5G42890.1 sterol carrier protein 2 (SCP-2) family protein similar to Sterol-binding [Medicago truncatula] (GB:ABE88913.1); contains InterPro domain Sterol-binding; (InterPro:IPR003033) 0.212678531553411 2.44416988045640 0.033377619014608 1 2.41167642325111 19.5921086480911 0.212678531553411 0.0581096636388028 AT5G24750_at 3.50524321495785 3.34023801880796 3.91138161428133 4.29510072179389 4.07565073597262 4.33135897638994 3.52094731584705 3.57620447369390 2.99796604709350 3.57787733758923 4.81640514132674 4.06902388039217 4.21770220766466 3.97057386644088 4.46823159285033 4.3968081995962 4.63668692460326 5.02116318011042 3.17483268817895 0.204031997939362 0.210897989642120 0.210520048551617 0.208486778559232 0.20812959396665 0.212101893381571 0.215971864180917 0.204031997939362 0.222486019411372 0.204031997939362 0.205390289661033 0.206272459116885 0.211082228341830 0.224322220171593 0.212883637982665 0.208499380065505 0.216612809543679 0.213341057954936 0.210677712887563 5 5|0 -|/ 8490746 8491934 8491250 8490575 8494590 - gene protein_coding_gene TRUE TRUE AT5G24750.1 similar to UDP-glucose:sterol glucosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G43620.3); similar to Os02g0210800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046269.1); similar to glucosyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] (GB:NP_639206.1); contains domain UDP-Glycosyltransferase/glycogen phosphorylase (SSF53756); contains domain no description (G3D.3.40.50.2000) 0.232316385077797 2.44271896167198 0.0334623797982962 1 2.40945817278931 7.66941549983989 0.232316385077797 0.0852910450475939 AT5G13350_at 2.1518057501619 2.07087379724497 1.99260811971016 1.87477954228105 1.60603594391390 1.83323419984880 1.60740820362419 2.07596791829094 1.98257297454743 2.20873349102527 2.22581307934276 2.08712262602699 2.25404850320069 2.2395358194768 2.11597495303706 2.07400772304309 1.82259157958255 2.34919618860688 2.2006733424994 0.199055907156310 0.199848177074079 0.203413409189366 0.208953983520968 0.204062827207090 0.205167557111396 0.204228348843037 0.204978350586012 0.200278703172853 0.201397248956799 0.199055907156310 0.201406486470857 0.209382672089437 0.209299296869922 0.204791538403170 0.199086624879597 0.214207798082710 0.203028703060995 0.205754484008916 5 5 + 4281732 4282266 4281949.818 4279887 4282290 + gene protein_coding_gene TRUE TRUE AT5G13350.1 auxin-responsive GH3 family protein similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13370.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13380.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13360.2); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) -0.239237239224929 -2.4421661992744 0.0334947268041 1 2.40861314709543 4.03993730691630 -0.239237239224929 0.0934496479876115 AT5G59845_at 1.30914363063614 1.22327076004292 1.75439072722859 1.34934411703557 1.36410233334192 1.58051573499547 1.45089432448953 1.03587556779129 1.26683684786617 1.10745068642934 1.29948520511729 1.70603527235807 1.14670606673406 1.74815864333906 2.16702306723343 1.88543225236729 1.50460406053707 1.87920238163781 1.30381619596548 0.187512225123731 0.181123723706422 0.186326232852046 0.181123723706422 0.181123723706422 0.187434772660691 0.186409943697382 0.187388897790655 0.1827527938289 0.183987809173147 0.193847887652435 0.188579923415317 0.186164204942514 0.187020339835844 0.191902749662700 0.181748690416071 0.199359638755360 0.187748129022867 0.182450264777187 5 5|0 +|/ 24128670 24129009 24128892.444 24128550 24129238 + gene protein_coding_gene TRUE TRUE AT5G59845.1 gibberellin-regulated family protein similar to gibberellin-regulated family protein [Arabidopsis thaliana] (TAIR:AT2G39540.1); similar to snakin-1 [Solanum tuberosum] (GB:CAC44032.1); contains InterPro domain Growth factor, cystine knot; (InterPro:IPR002400); contains InterPro domain Gibberellin regulated protein; (InterPro:IPR003854) 0.252760143820171 2.44167646107885 0.0335234112549665 1 2.4078645009375 2.82999987215476 0.252760143820171 0.108143552169636 AT5G61190_at 5.82487290422629 5.14349872416286 5.63391184499633 5.55024596211523 4.81448936000574 4.59598546584076 3.6263400317255 3.38349581549910 5.19307942557915 4.56530308153560 5.57885536314239 6.08142310878303 4.76294329659921 5.66140704914964 5.11068112619564 5.65721860469809 4.94169304547208 6.19409464329376 4.79241579160164 0.193157130946202 0.193374868024044 0.192125621885271 0.189648139364163 0.191259325467664 0.194035370537810 0.195454747778310 0.190335176355707 0.190731727498645 0.193170996023025 0.185797720570853 0.190976089702056 0.194421075205909 0.191888493281479 0.188294193254681 0.186253260390586 0.197751266996634 0.191817024044032 0.188834785709808 5 5 + 24636422 24637071 24636764 24632706 24637279 + gene protein_coding_gene TRUE TRUE AT5G61190.1 zinc finger protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); similar to Os07g0637200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060400.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96170.1); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.276058582426565 -2.43635405599340 0.0338367029589655 1 2.39973029483177 9.9960078281909 -0.276058582426565 0.131565713646969 AT5G10650_at 5.5342523851403 6.33788488949298 8.47349537922706 8.2201148239268 8.31069226074573 7.35904934285595 5.62953200742798 5.94305292229341 4.67034444424512 6.0331793925866 6.88196171613377 5.47995938775202 6.38284022461637 6.27157885970268 4.75254716704401 6.7082118267915 6.32610346489605 5.34026329404181 5.42540970210987 0.256422546104436 0.258100916836877 0.260126928093319 0.26145699699611 0.256422546104436 0.260229987169386 0.259502854802338 0.265649946859442 0.276127589809835 0.272435975474966 0.256422546104436 0.256422546104436 0.258374239907917 0.26604017804814 0.262417214927538 0.256422546104436 0.261713734954266 0.264840230429246 0.270416179757382 5 5 - 3365256 3366231 3365750 3365009 3368128 - gene protein_coding_gene TRUE TRUE AT5G10650.1|AT5G10650.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G24870.2); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE80412.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.390519013002949 2.43601313351768 0.0338568678701085 1 2.39920938847656 12.6731314625235 0.390519013002949 0.226559324250553 AT5G11410_at 1.57454783689933 2.05358174253399 1.34747196896985 1.36756053303035 2.01327917334571 1.70655851745713 1.35337680432246 1.23809485793394 1.24875820213220 1.75225438511555 2.57118138027404 2.33936894601216 2.07446860833659 2.70857894235244 2.64311006842858 1.48988668828981 2.01609313077718 2.64931422151993 1.81012088376700 0.204939755897114 0.213910241030001 0.224301764776402 0.207095528344366 0.207679740498904 0.214352104973243 0.2127507036869 0.213159775815526 0.209305354353926 0.210913523688778 0.213581573276622 0.212873899976119 0.206691385905218 0.220365952363024 0.223306578400274 0.214322310705108 0.204939755897114 0.217323321533723 0.206253176259272 5 5|0 -|/ 3638469 3639118 3638795.8 3638432 3639884 - gene protein_coding_gene TRUE TRUE AT5G11410.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to H0409D10.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66747.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.244949697187257 2.43575777544459 0.0338719795049185 1 2.39881922852174 3.53941463193847 0.244949697187257 0.100497615957584 AT5G14000_at 2.02539207093917 2.00451340613312 1.96652742600233 1.83847562062885 2.12808504819679 2.27411958661329 1.75934245406421 1.96589609560311 2.59293587941474 1.46444006696642 2.01742221947805 1.68335126985913 1.53648512855335 1.71318560661710 2.03846361546657 2.09214611820284 1.6668093095849 2.16548072881556 2.12244109044543 0.231628817124112 0.229122525600358 0.232215065394796 0.228907949996380 0.233051103112490 0.230507810295396 0.227794087436248 0.225963643759064 0.227100421988183 0.243615918147845 0.229062021287534 0.23658628585515 0.236392773452321 0.225963643759064 0.225963643759064 0.228597191045761 0.232655806188605 0.225963643759064 0.235977129615837 5 5|0 +|/ 4518228 4519012 4518640.4 4518010 4519302 + gene protein_coding_gene TRUE TRUE AT5G14000.1 ANAC084 (Arabidopsis NAC domain containing protein 84); transcription factor similar to ANAC083 (Arabidopsis NAC domain containing protein 83), transcription factor [Arabidopsis thaliana] (TAIR:AT5G13180.1); similar to unknown [Solanum lycopersicum] (GB:CAA99760.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.206693354278302 -2.43420622729595 0.0339639391796549 1 2.3964488090911 3.95734746944647 -0.206693354278302 0.0491985846942025 AT5G36120_at 8.99826933510467 9.45332365778621 9.01848249378553 9.412423021805 9.89948141167697 9.35548735754474 10.0748602541039 9.98412968401826 9.72904069538657 9.434485392264 10.6073298009295 10.6813463363912 9.98862941310955 10.5264132318913 10.5416351602216 10.3952776944283 10.1987357410694 10.3012344484273 8.985274075006 0.141144837717027 0.128147604113367 0.143530863258982 0.132320715488077 0.128534785248974 0.135360657485242 0.136752529953010 0.126682795452541 0.15601130149482 0.126682795452541 0.126682795452541 0.126682795452541 0.126724042059447 0.132780588049583 0.128130189704179 0.126682795452541 0.140149490458121 0.127847186016804 0.141258784889289 5 5 - 14215989 14216354 14216159.333 14215817 14216473 - gene protein_coding_gene TRUE TRUE AT5G36120.1 YGGT family protein similar to YGGT family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD88254.1); similar to Os01g0966200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045500.1); contains InterPro domain Protein of unknown function YGGT; (InterPro:IPR003425) -0.286320638121337 -2.43380157417919 0.0339879629097928 1 2.39583064060027 19.4185614599085 -0.286320638121337 0.141272943841738 AT5G52975_at 1.29405697996468 1.71847629686305 1.45136479230853 1.41847064084314 1.35135507421641 1.74673087311911 1.70911679875795 1.6813274474584 1.95005965566739 1.49485766160064 1.22313110035017 1.54404477433580 1.83606098281205 1.46678953278128 1.79689700267436 1.08986312465338 1.93561387881187 1.75060338865079 1.74806054959965 0.246612059152975 0.246612059152975 0.265744950808661 0.255153354322823 0.246612059152975 0.262067734256370 0.253895069732878 0.255901283459808 0.261807775960339 0.250223845818976 0.256602703184499 0.252432492557773 0.246828963295246 0.260985309632881 0.254877705215404 0.260471901029794 0.252847580140445 0.259308341375261 0.246612059152975 5 5 + 21498769 21499058 21498918.375 21498683 21499261 + gene protein_coding_gene TRUE TRUE AT5G52975.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52965.1) -0.244864315458557 -2.43346052427233 0.0340082234965928 1 2.39530965205702 3.20204641065288 -0.244864315458557 0.100655955381542 AT5G28490_at 2.88687824877079 2.45611266557968 2.87502609773242 2.47364571898415 2.85264525041297 2.62205077386373 1.89630460848303 2.33446047162874 2.57993086479781 2.62699060561018 3.52186697484032 3.97807953718779 3.17556371620919 3.51546749598993 3.47181089471475 3.22034475968076 3.20939239484858 3.86533123756106 2.38622886368713 0.233092426318125 0.233946520944644 0.234281706966265 0.237031875449518 0.233693511944454 0.240039965840547 0.243377766942119 0.24496226631576 0.262237857251566 0.243472650590532 0.249742626343193 0.237275478148717 0.240272205867340 0.240849013861922 0.242262365318457 0.242625205208028 0.233092426318125 0.240092625341529 0.235769780360515 5 5 - 10454553 10455087 10454805.909 10454397 10455200 - gene protein_coding_gene TRUE TRUE AT5G28490.1 LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04510.1); similar to Ribulose bisphosphate carboxylase, large chain [Medicago truncatula] (GB:ABE90860.1); contains InterPro domain Protein of unknown function DUF640; (InterPro:IPR006936) 0.277395915696518 2.43336174167052 0.0340140940310455 1 2.39515875436736 5.56253159830398 0.277395915696518 0.133130624343198 AT5G07780_at 3.10034097423066 2.57903134885743 3.25535961800428 3.01806944357788 2.88230706113891 2.94916123593765 2.57288206382605 2.53617141782345 3.24093789286635 2.69827503207476 3.01768299261660 2.7345695921084 2.62259645929894 2.83892754120874 3.27417782598861 2.85221447861763 3.1460787133443 3.29968383211353 2.99366303937288 0.206488619855465 0.202192576592025 0.191984311448795 0.197655137103288 0.198262140336178 0.197583117916349 0.191984311448795 0.197664114975228 0.203913308939363 0.198211428501763 0.196814103813590 0.19644243812929 0.200500554386603 0.199413142091954 0.199183669637976 0.191984311448795 0.199095658218916 0.191984311448795 0.192622875055630 5 5|0 +|/ 2481350 2482600 2482148.571 2479515 2482851 + gene protein_coding_gene TRUE TRUE AT5G07780.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07770.1); similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07760.1); similar to putative diaphanous homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC55695.1); similar to Os07g0596300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060171.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) -0.244125588500162 -2.43213737783137 0.0340869388017034 1 2.39328855373876 5.83709877084959 -0.244125588500162 0.0999961757464897 AT5G04060_at 4.36589482684583 4.5576280535973 3.69979409765132 4.42649060630108 5.26289641819977 3.43485015939737 5.17152128033302 4.96240966214891 3.68683646923229 3.59898929865139 5.18608912993693 5.47762965668083 4.3554429359278 4.90527677110549 5.20422646978974 3.74995888707547 3.31056814888178 4.92647516671316 3.40930505830690 0.225730360213867 0.218700479618815 0.226028419004738 0.223518390546026 0.218700479618815 0.242120872152455 0.222638859555916 0.227747005560921 0.223921211725621 0.220945025928036 0.231150161585312 0.218700479618815 0.218940043334348 0.225345069611478 0.23055119438711 0.218700479618815 0.230489489950483 0.225481687570879 0.231911298555337 5 5 + 1100956 1101704 1101372.364 1099119 1102059 + gene protein_coding_gene TRUE TRUE AT5G04060.1 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G10200.1); similar to dehydration-responsive protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46056.1); similar to Os05g0378800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055389.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Ankyrin; (InterPro:IPR002110) -0.548520054801288 -2.42843892922381 0.0343079087200183 1 2.38764040620930 8.58743664030637 -0.548520054801288 0.343953718989254 AT5G05220_at 2.50606611291327 2.46230545365365 2.43079452913137 2.04828479123233 2.36432760740848 2.56133411672853 2.36250366638465 2.40199061001308 2.62291140593956 2.3007654328398 2.77084592992456 2.09590785759298 2.54865201298655 2.27826736626882 2.69176253127011 2.40830790958798 2.59598255858210 2.37441735705688 2.06240879338972 0.198856900356638 0.202292841282923 0.201066530671733 0.193744076642338 0.192674747304498 0.191923805284156 0.191923805284156 0.202843509955751 0.198777359190623 0.202688919196946 0.198035358317073 0.196717994512559 0.197969074159292 0.195091733997102 0.200143568117982 0.192520512498550 0.208608703297458 0.197624126271573 0.196180791131091 5 5 + 1550275 1550663 1550401.727 1550268 1550929 + gene protein_coding_gene TRUE TRUE AT5G05220.1 unknown protein -0.222759954790621 -2.42614738092845 0.0344455225844672 1 2.38414173012203 4.79180743649906 -0.222759954790621 0.0751542511109301 AT5G53310_at 8.73938038882174 9.00738834854347 9.61005539347971 9.70339684098805 10.2101903820758 9.73330801780644 8.82429336661111 8.87905352551388 8.52490085849286 8.06959023591364 9.52839840470058 9.216112832395 9.0829301183531 9.59902911283421 9.3702960283364 9.55678815074948 8.85965609431506 9.43780686059043 8.22152461597013 0.144052957537426 0.142179655178152 0.142905783269872 0.145965504262187 0.143443107019248 0.156926236154478 0.149784830968443 0.142819839122507 0.181570757554311 0.15107362630011 0.142779979041995 0.142403129548463 0.146624029467100 0.143886473071098 0.141997055632450 0.139018590467254 0.175540802329348 0.145838739779133 0.141356999118272 5 5 + 21651928 21653145 21652283.727 21651807 21653581 + gene protein_coding_gene TRUE TRUE AT5G53310.1 myosin heavy chain-related similar to Os01g0621700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043606.1); similar to myosin heavy chain-related (ISS) [Ostreococcus tauri] (GB:CAL52493.1); contains InterPro domain Myosin tail 2; (InterPro:IPR010926) 0.240241763317552 2.42489041143225 0.0345212359454141 1 2.38222291614197 18.1400745015183 0.240241763317552 0.0965012697116777 AT5G34830_at 2.52531339017327 2.82219945646062 3.17452786536490 3.34127062234194 2.06494688640578 2.35294845196860 1.54505471681303 2.81412946373285 2.91944598156292 2.84194639610602 2.08430154819938 2.34402682137002 2.54268015226635 2.10819460066106 2.33238253947688 2.65002510306252 2.98531559095849 3.02815541794239 3.1335181811043 0.216089234166810 0.214270715138627 0.226790827998973 0.223955383436422 0.212230925129100 0.219156137987938 0.216785284360943 0.218271048204635 0.207671587679319 0.211923657985852 0.214964640968453 0.220340441235423 0.222471507008907 0.219738998666003 0.230750481653002 0.211817126215104 0.218255092109368 0.220619971373995 0.216691137594549 5 5|0 +|/ 12998897 12999697 12999385.375 12998875 12999727 + gene protein_coding_gene TRUE TRUE AT5G34830.1 similar to SLL3 ORF2 protein [Brassica napus var. napus] (GB:CAB89177.1) -0.39641962650125 -2.42239243110254 0.034672184169494 1 2.37841027144513 5.31722656065757 -0.39641962650125 0.232785225648219 AT5G05370_at 8.52135723661599 8.56915766543186 9.00974098862875 9.11160636874173 9.0440042568906 8.53157779991754 8.2879407612684 8.3719445243405 8.25505124073808 7.99958977557863 9.09509183749819 9.24711119616551 8.63445613516413 8.7555946700113 9.0063859552169 8.78537720670763 8.31798451652166 8.48218166204133 7.98821623252644 0.122472025168499 0.114191667582571 0.117051855210245 0.112831798548452 0.110603916993188 0.117886140644354 0.114115368203739 0.116493713139115 0.121682633884677 0.116560584533410 0.111125195583716 0.114933581526203 0.115614700658068 0.112550519391058 0.113309151719900 0.115344453836507 0.129357504128994 0.112835629830924 0.111891296467742 5 5|0 -|/ 1590978 1591820 1591614.4 1590798 1591904 - gene protein_coding_gene TRUE TRUE AT5G05370.1 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative similar to ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative [Arabidopsis thaliana] (TAIR:AT3G10860.1); similar to Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (Ubiquinol-cytochrome c reductase complex 8.2 kDa protein) (GB:P46269); contains domain Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (SSF81508) -0.235898126126628 -2.42140308522317 0.0347321464925118 1 2.37690047137442 17.1166538570779 -0.235898126126628 0.0919470783134117 AT5G44930_at 4.40211841183126 4.50036779472817 5.78174011170648 5.15629799486814 6.42068354066496 5.56819600578068 4.72179117968787 4.30384533362288 3.27653669305092 4.05192504860369 4.88495863596652 5.09834247067994 4.90965079822383 4.98204983155723 4.5079637279352 5.14370102212851 5.52964911135053 4.52408622077943 3.84582477216711 0.206017758409092 0.191645566051025 0.191949663719298 0.199488937553878 0.198319734412817 0.196918244847214 0.206122124072716 0.201823351428588 0.219792775924627 0.193746887722730 0.192762018095225 0.194072980242259 0.196173139678111 0.19860798955282 0.194887198600353 0.197086234334812 0.220849264730480 0.199624382394196 0.203437106355507 5 5 - 18157863 18158465 18158217.273 18156002 18159374 - gene protein_coding_gene TRUE TRUE AT5G44930.1|AT5G44930.2 ARAD2 (ARABINAN DEFICIENT 2); catalytic Encodes a putative arabinosyltransferase. similar to ARAD1 (ARABINAN DEFICIENT 1), catalytic [Arabidopsis thaliana] (TAIR:AT2G35100.1); similar to Exostosin-like [Medicago truncatula] (GB:ABC75371.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.350832257714817 2.4187608425988 0.0348927843852914 1 2.37286889512588 9.44303624591208 0.350832257714817 0.197482936146454 AT5G42110_at 2.34008379053615 3.0092990759982 2.68918804750607 3.13095748666983 3.32091997224762 2.73051019346945 3.31363107770109 2.98827690195936 3.04255068529279 3.6328503289594 3.89258719250859 3.69441676919684 3.18943470641587 3.43202282811799 3.86643344214135 3.23125646889089 3.2518076969462 3.15778867944884 2.99828385117292 0.174176115937606 0.175591215751657 0.180213819871175 0.178439732483640 0.174176115937606 0.180386795931322 0.177045348057704 0.180401217233185 0.180822829601012 0.179803599925476 0.174176115937606 0.180176991135473 0.180583113679455 0.184772889833537 0.174176115937606 0.174176115937606 0.175167239196222 0.179641184310338 0.177028433786731 5 5 - 16849288 16849430 16849342.091 16849284 16849454 - gene protein_coding_gene TRUE TRUE AT5G42110.1 unknown protein -0.330900477848604 -2.41850300086508 0.0349084989305459 1 2.37247552621883 6.28487336564432 -0.330900477848604 0.181290630471710 AT5G20580_at 5.60184826227505 5.40898238657548 6.09074088714094 6.15911241834962 6.71874050373482 6.28466657812152 5.30625382440340 5.14489372029829 4.40376044884770 4.58065270549564 6.04082902821971 6.29225280430952 5.79780007581124 6.53603014038859 6.09798238085746 6.53307613867904 5.83024104204333 5.90583873976651 4.89144094892117 0.222881754940890 0.224253705598701 0.219365230210983 0.218942150057462 0.215579517050444 0.222458881806923 0.219809112905543 0.226089225528567 0.224809735339370 0.222664516837836 0.220689700828691 0.219575828331991 0.217447595236683 0.219371039929332 0.220280679874342 0.215579517050444 0.229019264663640 0.219716856743284 0.235842193668929 5 5|0 -|/ 6958803 6960019 6959452.625 6958599 6962806 - gene protein_coding_gene TRUE TRUE AT5G20580.1|AT5G20580.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G06005.1); similar to Os02g0778300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048294.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16977.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 0.231844722619151 2.41753677076073 0.0349674487283566 1 2.37100150431439 11.2166753200362 0.231844722619151 0.0876157781109087 AT5G41450_at 1.74090835623418 1.06315876882037 1.69447085500031 1.93511827199777 1.24937643898932 1.57677631387252 1.25718967083935 2.09699811583000 2.37748813720362 2.69211809096365 1.85644907770507 2.05568017980359 2.34810521363187 2.00625992053510 1.56350641615803 2.19879350708218 1.68988670583286 2.18306511238608 2.31345533340387 0.182700218992409 0.186019585403777 0.185630218703712 0.188541247518455 0.178980783776375 0.184951831203915 0.178980783776375 0.183262986481449 0.193711584618448 0.188387247155593 0.185079338576317 0.182653977170776 0.189378309658945 0.187086396594378 0.192033498400563 0.180402065179689 0.193388008868787 0.178980783776375 0.182021068750865 5 5 - 16605846 16606292 16606046.818 16605828 16606322 - gene protein_coding_gene TRUE TRUE AT5G41450.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G41430.1); similar to C3HC4-type RING zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC15936.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.353225485425007 -2.41745151468415 0.0349726548732305 1 2.37087144886454 3.80111899253076 -0.353225485425007 0.199555709159502 AT5G67300_at 8.76892009182155 9.05662469370153 10.5352421757201 10.7535230484275 10.4519771061047 10.0865262926437 9.47914973121889 9.60280276589659 9.21112174717553 9.1551560270591 10.1416950406488 9.29400009851236 9.88741420728269 9.95143553696124 8.99884518126782 9.58207125844325 9.88867221983254 9.7664506772687 8.7484462485915 0.131875115531596 0.131869525820023 0.138935062329134 0.134184643493377 0.133674431995373 0.132794306724850 0.138983203882581 0.131715558088603 0.140040020663777 0.136812865959654 0.128116088931628 0.133196295726748 0.130111589078667 0.134228910914320 0.135304181837387 0.131887174177337 0.144467982683058 0.128116088931628 0.140649952151330 5 5 + 26871684 26872173 26871842.909 26871248 26873232 + gene protein_coding_gene TRUE TRUE AT5G67300.1 AtMYB44/AtMYBr1 (myb domain protein 44, myb domain protein r1); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G50060.1); similar to sucrose responsive element binding protein [Vitis vinifera] (GB:AAY28930.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.234960224649077 2.41615219778912 0.0350520910844134 1 2.36888950339640 19.2053779224264 0.234960224649077 0.0914516286196194 AT5G57130_at 1.73837462731916 1.85671421997125 1.90027854393299 1.50548348791041 1.96066133394680 1.94512175321517 1.43827923604754 2.13089696578494 1.92438344715524 2.16135344080494 3.27187829368123 3.50700409648731 2.80175781740295 3.17853200820367 3.66912314351143 3.31613332308114 2.10174504503368 2.94741005749208 2.36483416964011 0.220154443204392 0.219404760497524 0.228346651638572 0.221103774855804 0.221191843641053 0.227810917122837 0.219673465452738 0.223043813801996 0.230885925269468 0.216959825757906 0.223331921036365 0.246287723881985 0.220456815831805 0.232773210179988 0.230439027284791 0.239552100393516 0.218585591695902 0.237078807528708 0.216977353257417 5 5 + 23166026 23166597 23166292.818 23162206 23166794 + gene protein_coding_gene TRUE TRUE AT5G57130.1 protein binding similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G29920.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28470.1); contains InterPro domain Clp, N terminal; (InterPro:IPR004176) 0.282097878941305 2.41435266244722 0.0351624000118921 1 2.3661449144417 4.43417043383859 0.282097878941305 0.139502690255530 AT5G10810_at 8.08387708156953 8.23225051340129 8.51655217759966 8.96205356893434 9.20889760165776 8.48816242983553 7.6516279090814 7.51597795747207 6.50861507583957 5.79544814846951 7.74100320696203 8.15379797636786 7.77291624621328 7.946193816314 7.8955466265518 8.1005557904423 7.75385298493243 7.40507475815727 6.48971984222319 0.186646849647354 0.192501034971179 0.195121480874571 0.191134966180813 0.191421853632589 0.199006628653621 0.185690328393467 0.190071765669105 0.220192874761392 0.209071656606791 0.193609513661739 0.185690328393467 0.190279614768877 0.199937774368780 0.191844502687218 0.185690328393467 0.206138344126551 0.198351041558889 0.199307634286745 5 5|0 -|/ 3418922 3420261 3419755.889 3418667 3420636 - gene protein_coding_gene TRUE TRUE AT5G10810.1 ATER (Arabidopsis thaliana enhancer of rudimentary homologue) enhancer of rudimentary homolog ATER Identical to Enhancer of rudimentary homolog [Arabidopsis Thaliana] (GB:Q96319;GB:Q9LEV8); similar to rudimentary enhancer [Glycine max] (GB:CAA06199.1); contains InterPro domain Enhancer of rudimentary; (InterPro:IPR000781) 0.294333987858319 2.41284493262138 0.0352550824439607 1 2.36384571567924 15.3877809205706 0.294333987858319 0.150701329342774 AT5G61520_at 7.3920499794534 8.24096923364881 8.67728528999498 8.95436827492139 9.24829280509693 8.91402088094337 5.70313845710181 6.09052595611761 6.30535618425974 5.90775028235865 6.36815410431557 6.65359387254615 7.2751278737522 6.5628427763383 4.59081724381959 6.65025527746146 7.089416249496 6.25582311856201 5.2054760059334 0.263210444690316 0.252743941850708 0.261201554441455 0.252191657616499 0.259154859287438 0.258622361141777 0.248772348130243 0.248623914011345 0.260389212348308 0.244566508600482 0.253095660104037 0.248153252538071 0.247782434014671 0.252694144012513 0.267822131125673 0.246257261496915 0.259578867866366 0.244634560585157 0.251478217580294 5 5 - 24756584 24757140 24756928.091 24756252 24758499 - gene protein_coding_gene TRUE TRUE AT5G61520.1 hexose transporter, putative Identical to Sugar transport protein 3 (Hexose transporter 3) (STP3) [Arabidopsis Thaliana] (GB:Q8L7R8;GB:Q9ZS56); similar to glucose transporter, putative [Arabidopsis thaliana] (TAIR:AT4G21480.1); similar to STP1 (SUGAR TRANSPORTER 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT1G11260.1); similar to Hexose carrier protein HEX6 (GB:Q07423); similar to putative hexose transporter [Vitis vinifera] (GB:AAT09978.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) 0.326215602351484 2.41229230654455 0.0352891128683775 1 2.36300307114961 14.0210553456866 0.326215602351484 0.178107274374111 AT5G23880_at 5.29103209583077 5.40141326772705 5.79939723676254 5.80976095758909 5.37791965016834 4.93919738953263 4.06396361677986 4.52038035931713 4.12364565035862 3.95532951865271 4.1637568669479 4.72382568838376 4.30881180651607 4.70496164505559 4.44066796663264 4.69490262423912 4.73153019558193 4.65287853658351 3.78828013857534 0.197017745805811 0.199729456456277 0.196785561644173 0.206573984126084 0.19459444774519 0.200093644928233 0.204532451734408 0.19459444774519 0.196795788276006 0.197316807819577 0.199004400508025 0.196878170628697 0.202119636971943 0.199719183926723 0.198291833108136 0.19929152532341 0.19459444774519 0.200431588081357 0.199316125987776 5 5 + 8057232 8058118 8057696.273 8052507 8058357 + gene protein_coding_gene TRUE TRUE AT5G23880.1 CPSF100 (ENHANCED SILENCING PHENOTYPE 5) Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus. Identical to Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit) [Arabidopsis Thaliana] (GB:Q9LKF9;GB:Q9FF92); similar to hydrolase [Arabidopsis thaliana] (TAIR:AT1G61010.3); similar to PREDICTED: similar to cleavage and polyadenylation specific factor 2 isoform 1 [Strongylocentrotus purpuratus] (GB:XP_780045.2); similar to Os09g0569400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063978.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279); contains InterPro domain RNA-metabolising metallo-beta-lactamase; (InterPro:IPR011108) -0.252545366980974 -2.41102237794740 0.0353674359021484 1 2.36106684138732 9.40459241443249 -0.252545366980974 0.111225138357766 AT5G46100_at 1.65072316064578 1.81147151532717 2.11992804911699 2.09243515573420 2.28170969478991 1.79609553458059 1.93447315263891 2.02980856956034 0.844315702650532 1.21710311258367 1.7479752974125 1.61869132860959 1.68775442660487 1.77188334543913 1.64664920561459 1.31098309927009 1.9837957498748 1.47147939507356 1.40343860860738 0.199415359328008 0.198105524331451 0.207138824854866 0.198376258873231 0.197814964644620 0.203782468013013 0.198606120259194 0.201111707144496 0.216262289352308 0.204659053722812 0.205767665840407 0.199159374197288 0.203850978780252 0.206053316083998 0.206647992485944 0.199938250090236 0.201920320957018 0.204812472401250 0.207609659427113 5 5 - 18711557 18712115 18711880.818 18711543 18712961 - gene protein_coding_gene TRUE TRUE AT5G46100.1 pentatricopeptide (PPR) repeat-containing protein similar to EMB1025 (EMBRYO DEFECTIVE 1025), binding [Arabidopsis thaliana] (TAIR:AT4G20090.1); similar to fertility restorer B-like [Oryza sativa (japonica cultivar-group)] (GB:BAD73299.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.233231652175268 2.40959440835753 0.0354557087147523 1 2.35888991400606 3.36950758184986 0.233231652175268 0.0901722489544775 AT5G65550_at 1.57873524790471 1.36287574076548 1.69760956017853 1.49037074230107 1.36397624472510 1.05308035665619 1.39479641658818 1.54051465896036 1.64775084517356 1.97444952897451 1.22755112568166 1.05049479758314 1.57077359508491 1.06629036896979 1.54580420203713 1.50893385136074 1.74000802029293 1.57158018413489 1.13911381039079 0.172884269887569 0.174150676991074 0.184950284778974 0.183132207585774 0.174079275687471 0.183816595397462 0.173939098373443 0.178088749443208 0.180431073558028 0.184959304184993 0.180023019782727 0.182090092762969 0.183460264954426 0.188980884090104 0.177843441428659 0.178925923775631 0.179523806101196 0.17870181806044 0.179902189393478 5 5 - 26215792 26216182 26215969.091 26215530 26217053 - gene protein_coding_gene TRUE TRUE AT5G65550.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G49690.1); similar to putative UDP-rhamnose:rhamnosyltransferase [Fragaria x ananassa] (GB:AAU09445.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.223998700361442 -2.40935895584389 0.0354702843119225 1 2.35853099554073 2.93388699417134 -0.223998700361442 0.0788174828108958 AT5G50160_at 9.57475572312663 9.4968785474083 10.3516107672149 10.2830054968930 10.8090588818765 9.92736204086593 9.31087726420816 8.8513110398289 8.6468688346618 7.87294188334121 9.37629457876983 9.30555821976399 9.43530491712419 9.46774769043019 9.443341781915 9.28563757329683 9.34344367262535 8.82890452877508 8.16890025069637 0.124983550364646 0.122508870000577 0.124657291336345 0.118361427824185 0.121646792590576 0.139275270100379 0.124243889842693 0.120567467354966 0.132469172279384 0.134927887676120 0.123472515690306 0.122642682410585 0.118361427824185 0.127194571461581 0.123969779372005 0.121395010987087 0.121457950017264 0.125496396756563 0.124793768311248 5 5 + 20435092 20435781 20435303.5 20432997 20435968 + gene protein_coding_gene TRUE TRUE AT5G50160.1 ATFRO8/FRO8 (FERRIC REDUCTION OXIDASE 8); ferric-chelate reductase/ oxidoreductase Encodes a ferric chelate reductase that is expressed in shoots and flowers. similar to FRO1 (FERRIC REDUCTION OXIDASE 1), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G01590.1); similar to ATFRO3/FRO3 (FERRIC REDUCTION OXIDASE 3), ferric-chelate reductase [Arabidopsis thaliana] (TAIR:AT1G23020.1); similar to ferric reductase [Cucumis sativus] (GB:AAT01415.1); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916) 0.319660168027937 2.40889117353433 0.0354992595396639 1 2.35781794141678 18.5957821917965 0.319660168027937 0.172999448111471 AT5G11580_at 8.21830785807582 8.53606111843403 8.9584114223023 8.91946380840755 9.86920229810803 9.13172392735909 7.96399083246038 7.93839381233286 7.20118219813529 7.91504429271345 8.68180294746651 9.03156364116048 8.8718979253877 8.916521471774 8.4217022106708 9.15879843762654 8.8100616023523 8.69512603926492 7.752314032516 0.178851338567179 0.179226429057982 0.183126233354813 0.180073857203892 0.181479587174707 0.184984203035432 0.190855125484474 0.183138541519907 0.200033990068831 0.178475234129951 0.183593755860897 0.173388173755054 0.175872460262875 0.190049800193883 0.177344106875568 0.173388173755054 0.188693560003844 0.193306890517686 0.176834944564249 5 5 + 3720532 3721101 3720726.727 3718811 3721335 + gene protein_coding_gene TRUE TRUE AT5G11580.1 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to regulator of chromosome condensation family protein [Beta vulgaris] (GB:CAK22423.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 0.281026919882291 2.40799870626167 0.0355546045319149 1 2.35645761123312 16.9150849474773 0.281026919882291 0.139200249821773 AT5G22875_at 6.53186006259419 6.39648382565987 7.53969074430033 7.70064999653855 8.71010252642186 7.68203772542009 6.10456875611374 6.3352681696075 6.81493118386138 6.39664968872954 7.97668145835552 7.91514013438453 7.9892054309882 8.20391534296595 7.36986162738317 7.80184810738855 6.94626947365497 7.54934787675926 6.49382813117555 0.223239778576855 0.2257536101171 0.224204649485623 0.224311679545268 0.243247996665846 0.221504611172192 0.227364638098140 0.224090473701437 0.228074540734303 0.225480103863399 0.223152784904499 0.223706244780486 0.218003130197991 0.232146165274288 0.231380752214138 0.229707750934948 0.224752674139953 0.218003130197991 0.223872633400337 5 5|0 +|/ 7651324 7651576 7651474.778 7650585 7651779 + gene protein_coding_gene TRUE TRUE AT5G22875.1|AT5G22875.2 similar to Os04g0165500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052133.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79573.1) 0.334943502989441 2.40696984751746 0.0356185120745919 1 2.35488952461503 14.2688344005356 0.334943502989441 0.185933047564386 AT5G38130_at 2.53264475358169 2.23364775725234 2.18761545239197 2.43824618085005 1.83409258924701 2.10091447541098 2.12895032969694 2.4156695901234 2.22701401527697 2.33814886024014 2.44149300687554 2.41950644650927 2.23732692008543 2.24430631717879 2.81301931170924 2.5147238895169 2.24686458457296 2.58051924888493 2.24168064130844 0.199408931755341 0.200555538201462 0.202471215728412 0.200880787562094 0.202743918982058 0.206339579455983 0.201789683145066 0.204223517792611 0.198134313372533 0.205634482850223 0.202019402179978 0.198397897365028 0.206597239076746 0.199704276611618 0.203502306959848 0.200585992474739 0.211976963792015 0.203959702914389 0.198134313372533 5 5 - 15235206 15235727 15235492.182 15235176 15236602 - gene protein_coding_gene TRUE TRUE AT5G38130.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G50300.1); similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase [Malus x domestica] (GB:AAV50009.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.23772499047094 -2.4069105545459 0.0356221984689059 1 2.35479916047844 4.58705654337354 -0.23772499047094 0.0956691540165825 AT5G28020_at 10.1742275268467 10.1444623140158 11.4548634899965 11.3559606609527 11.7894465859706 11.3018381236946 10.9809105262684 10.7321553906135 10.7037976938504 10.7647918977575 11.4671172430839 11.0265764179323 11.4851444876961 11.4648214787023 10.8828803446970 11.7395863749382 11.5844732247967 11.3254456200031 10.6501906305859 0.0863480282279233 0.0834662864902098 0.0853988722900483 0.0856048462064374 0.0812037203873544 0.0855272791192222 0.0836750013294945 0.0887169763697729 0.0894995382952611 0.0856035425647176 0.0825663249342698 0.0813944926381153 0.0835685351619917 0.083707228135769 0.0851154591433776 0.0810844907856433 0.0855683498408088 0.0864980147787744 0.084528642707187 5 5|0 -|/ 10026583 10027554 10027149.111 10026187 10028584 - gene protein_coding_gene TRUE TRUE AT5G28020.1|AT5G28020.2|AT5G28020.3|AT5G28020.4|AT5G28020.5|AT5G28020.6 ATCYSD2 (Arabidopsis thaliana cysteine synthase D2); cysteine synthase|ATCYSD2 (Arabidopsis thaliana cysteine synthase D2) Encodes cysteine synthase AtcysD2. similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.1); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926); contains InterPro domain Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; (InterPro:IPR001216); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859)|similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.1); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926) 0.238091591801841 2.40408546112225 0.0357982735576273 1 2.35049420390412 22.0308659388177 0.238091591801841 0.0964007474264992 AT5G42400_at 5.29680492283757 4.69728287969716 6.45240487296604 6.29224025131639 6.81976731745079 6.04604452182758 5.28747376195308 4.46199887960792 4.995121849331 5.15938636342176 6.41400510606878 6.56937960817749 6.37548391794427 6.37161334100975 6.69169093816069 6.53521226425145 6.27785569761874 6.33608338867345 5.2630379698531 0.204497402373673 0.204992328910974 0.205994427914903 0.210674399742601 0.210854386981336 0.209508684099096 0.204947201974027 0.207960737046662 0.230200921155875 0.226551905717486 0.207952967943166 0.207429091311515 0.220202640600414 0.208038740720423 0.212720212454591 0.204497402373673 0.204798023456719 0.204980642091207 0.214167776742929 5 5|0 -|/ 16971736 16972842 16972400 16971697 16977899 - gene protein_coding_gene TRUE TRUE AT5G42400.1 SET domain-containing protein (TXR7) similar to ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX), histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding [Arabidopsis thaliana] (TAIR:AT2G31650.1); similar to PREDICTED: similar to CG40351-PA.3 [Tribolium castaneum] (GB:XP_969339.1); similar to Os12g0613200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067262.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain GYF; (InterPro:IPR003169) 0.381075592365985 2.40308347035144 0.0358609266889637 1 2.34896760864063 11.4620509727604 0.381075592365985 0.223309937473785 AT5G05950_at 7.38396780772088 7.62308413619252 8.13987615463612 8.02117513996564 8.82397123953682 8.28658456885737 6.44923676754463 7.29250738103274 6.11863596652571 5.70833707949834 7.68619656085709 7.76836827486616 7.92194020450434 7.51047023966269 7.50674108569264 7.69242337018105 7.10590984740104 7.36369602887396 6.26049511313127 0.218337119078930 0.20472849556862 0.218865925440488 0.210849586302764 0.218029025369784 0.232059504320926 0.214303506084112 0.223849734194937 0.227533719870941 0.218253541753700 0.20472849556862 0.213001635650959 0.205881485062240 0.215978105216524 0.209405887901644 0.209583490898028 0.232471074968381 0.211557980853897 0.208603974248295 5 5 + 1788817 1789290 1788991.364 1788768 1789439 + gene protein_coding_gene TRUE TRUE AT5G05950.1 MEE60 (maternal effect embryo arrest 60) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46890.1); similar to Os07g0240400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059264.1); similar to Os10g0178200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064246.1); similar to H0201G08.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67780.1) 0.326148505113327 2.40295296667307 0.0358690947733271 1 2.34876878846702 14.5518625267142 0.326148505113327 0.179105834448448 AT5G20540_at 2.72278021968971 2.44819073308426 2.80177080021866 2.79916384999655 2.79964732648993 2.82955332689465 3.19357329635142 2.93402881425264 2.95564758335361 2.95451710208463 3.58138913696686 3.58451750294232 3.31727811927989 3.21431241106364 3.73663723603895 3.29683559230365 3.09303784733001 3.37945928585382 2.93126501251260 0.15379384404271 0.146819044534904 0.148307270155841 0.150651849908492 0.150255433294664 0.152734172815558 0.151524228464503 0.149664218980377 0.154990115276032 0.149243563294063 0.148941788621415 0.146819044534904 0.146936006768533 0.150878593250728 0.149433435573479 0.14842268313876 0.150267777808299 0.151381853793886 0.149498276772115 5 0|5 /|+ 6948162 6951517 6950228.938 6947845 6952040 + gene protein_coding_gene TRUE TRUE AT5G20540.1 ATBRXL4/BRX-LIKE4 (BREVIS RADIX-LIKE 4) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. similar to ATBRXL2/BRX-LIKE2 [Arabidopsis thaliana] (TAIR:AT3G14000.2); similar to major intrinsic protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD38314.1); similar to Os02g0700700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047842.1); similar to Os08g0462700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061986.1); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591) -0.213868838349070 -2.40294503219826 0.0358695914420329 1 2.34875670050381 5.98987685793356 -0.213868838349070 0.0655929431228373 AT5G03770_at 2.43655386399906 2.61926107922374 3.101994128876 3.2078620036857 3.82005948657910 3.63487430011851 2.27086092558843 2.40342746909513 2.81478942345358 2.76797506317132 2.97469019890776 2.93190375309618 3.22567936790356 2.65506666283186 2.65319506764545 3.2489110715561 3.26887356109408 3.09891539845878 2.78812657174212 0.230137287357986 0.225185465911362 0.226481227704855 0.227543921469769 0.223398002069843 0.23245630757235 0.223398002069843 0.225666872827678 0.223398002069843 0.230664077184345 0.225535753807637 0.233488435761296 0.232244132011545 0.235161431102185 0.224852415898865 0.223398002069843 0.244721106006645 0.227348852730054 0.223398002069843 5 5|0 +|/ 996787 997561 997172.8 995159 997847 + gene protein_coding_gene TRUE TRUE AT5G03770.1 3-deoxy-D-manno-octulosonic acid transferase-related similar to Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] (GB:ABE80128.1); contains InterPro domain Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; (InterPro:IPR007507) 0.206525793735137 2.40291741146060 0.0358713204501055 1 2.34871462110661 5.8355873594669 0.206525793735137 0.0537466039204948 AT5G61210_at 10.707203615335 11.0225518977502 11.6340609990646 11.6436034094835 11.1688106765400 11.1725865642777 9.65484409478902 9.77469663817525 10.2232465814571 9.3729652369085 10.3907667736750 10.3471524073683 9.9092960650656 10.2768399064912 9.88543546437567 10.3048600382968 10.3581625662882 10.2056167075864 9.33335435220115 0.0986889096837488 0.096929375095539 0.0988038667961094 0.0984928018765703 0.0977930767310561 0.103852583038401 0.105671398229761 0.0990503109778008 0.102866959255959 0.103231049043640 0.0975929414055577 0.0939260579512114 0.098036887118521 0.097577610853583 0.102429328772059 0.0939321619781377 0.101198317993605 0.0991992715278733 0.101739781949072 5 5|0 +|/ 24641637 24642558 24642068.111 24640525 24642857 + gene protein_coding_gene TRUE TRUE AT5G61210.1 SNAP33 (synaptosomal-associated protein 33); t-SNARE membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation Identical to SNAP25 homologous protein SNAP33 (AtSNAP33) (Synaptosomal-associated protein SNAP25-like 1) (SNAP-25-like protein 1) (Snap25a) (SNAP33) [Arabidopsis Thaliana] (GB:Q9S7P9); similar to SNAP30 (synaptosomal-associated protein 30) [Arabidopsis thaliana] (TAIR:AT1G13890.1); similar to SNAP-34 [Hordeum vulgare subsp. vulgare] (GB:AAP79417.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain SNAP-25; (InterPro:IPR000928); contains InterPro domain t-snare; (InterPro:IPR010989) 0.209252451949566 2.40271166757182 0.0358842022015887 1 2.34840117957546 20.7737722192597 0.209252451949566 0.0584080605989683 AT5G48940_at 1.58318585887164 1.76874840468982 1.62762570123057 1.36530991430119 1.37946357321068 1.53827460336431 1.24191726258853 1.38670727444445 2.05819844735503 1.84781759201423 1.44593675853873 1.39101654271939 1.97226910727624 1.67661190894086 1.73231723831072 1.32533621815539 1.88792098135137 1.95526752123231 1.64320090326714 0.185994626986777 0.186974687777449 0.190513408328878 0.187562025918108 0.1849848301096 0.190592756252619 0.185969300552852 0.188877607175307 0.190108019842672 0.189746653666341 0.187715812927566 0.184611449913532 0.188862102759301 0.192696460673123 0.191055165614674 0.189025030201127 0.187053235733988 0.184315011583035 0.183959338036748 5 5 + 19859823 19860886 19860448.182 19856936 19861033 + gene protein_coding_gene TRUE TRUE AT5G48940.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G56040.2); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to receptor protein kinase [Pinus sylvestris] (GB:CAC20842.1); similar to CLAVATA-like kinase [Triticum aestivum] (GB:CAJ19346.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.214608234373151 -2.40138118015919 0.0359676137904436 1 2.34637438479239 3.24794083180986 -0.214608234373151 0.0668958961729808 AT5G17350_at 2.14551124459159 2.03508502173459 2.01267983015753 2.07442295662502 2.0384499317362 2.15080965250032 2.30885074161692 2.54708680096982 2.02273017062793 2.01254015443737 2.13204786663177 2.36737691457070 2.43476896924771 2.39991019561012 1.82590555849750 2.50835040391812 2.24877414845611 2.38984404700031 2.27012267468211 0.199248479439835 0.1942489978751 0.202833302270173 0.190123524892728 0.195732142202849 0.198091782795869 0.198125123270628 0.196300310155665 0.194808265124511 0.195188406535998 0.190123524892728 0.193269957286747 0.198281424391226 0.191197210086327 0.212461207055256 0.192988039662864 0.200062126633365 0.20178873779598 0.198638569169956 5 5 + 5718859 5719205 5719041.727 5718774 5719610 + gene protein_coding_gene TRUE TRUE AT5G17350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03280.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92227.1); contains InterPro domain TGS-like; (InterPro:IPR012676) -0.204463458872161 -2.39936341519801 0.0360944733365672 1 2.34330110058064 4.3591969872785 -0.204463458872161 0.0505684830783934 AT5G07900_at 4.28992639088224 4.49970609453712 4.95217911314175 4.55643929955996 5.28980725572297 5.13149482533866 4.82225033127061 4.70224354792441 3.83766992460035 4.13509583719759 4.66688024202119 5.57489905455314 4.87939374234708 4.83382709732488 5.83608344034731 5.08077656141956 4.62632013522214 4.7048131500591 4.41272444490393 0.219829027028198 0.222123827297040 0.211646116621818 0.216581638933846 0.216937411030375 0.22565509928036 0.213032137750697 0.226464848771531 0.215463791494287 0.217748640218904 0.216295608741140 0.218592145258006 0.215059917250533 0.216823771442175 0.211935381024100 0.215494320056644 0.227891989220852 0.219351243961144 0.214947919084617 5 5 + 2520834 2521382 2521089.727 2520170 2521547 + gene protein_coding_gene TRUE TRUE AT5G07900.1 mitochondrial transcription termination factor family protein / mTERF family protein similar to mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] (TAIR:AT1G21150.1); similar to Os05g0403400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055498.1); similar to mitochondrial transcription termination factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37286.1); similar to Os07g0423000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059486.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) -0.227786264642356 -2.39933244998690 0.0360964235542886 1 2.34325394151710 9.35744131403676 -0.227786264642356 0.0847936027292198 AT5G43640_at 2.06137096432277 1.79024922332891 1.89129165421734 1.9967410924985 1.88937115381977 1.52652022786324 1.90100998220617 1.82887433969904 2.19633763449186 2.05909293113989 2.20040001935476 1.93271348142767 2.18143439757169 1.86623274369975 2.32987581975972 1.80783711540194 1.81015829639582 2.10003636131376 1.99879779826935 0.156767705870294 0.162092164220499 0.152563197730571 0.153599086348992 0.151457920259581 0.159737555293413 0.157452739238181 0.150063775473077 0.158088470235078 0.153692615533177 0.151153501800845 0.149823379757124 0.153378420400867 0.158852081742505 0.166222515409729 0.155041620133307 0.165578263212643 0.15521531407357 0.157195649862791 5 5|0 +|/ 17548763 17549520 17549304.889 17548529 17549597 + gene protein_coding_gene TRUE TRUE AT5G43640.1 40S ribosomal protein S15 (RPS15E) Identical to 40S ribosomal protein S15-5 (RPS15E) [Arabidopsis Thaliana] (GB:Q9FIX6); similar to 40S ribosomal protein S15 (RPS15C) [Arabidopsis thaliana] (TAIR:AT5G09500.1); similar to Os03g0798600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051572.1); similar to ribosomal S15 protein [Retama raetam] (GB:AAL32040.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713) -0.225015130826435 -2.39831222337434 0.0361607358421589 1 2.34170024326911 3.9173429884108 -0.225015130826435 0.0814444095687194 AT5G22600_at 1.32828630478635 1.68815162074664 2.05545210357321 2.45766707592334 1.52271728023002 1.89961446769067 1.67824244709984 1.66039493579144 1.49506842150274 1.53587790475583 1.37911388813274 1.4827155890268 1.97756644779399 1.91979526137499 1.53338360754802 1.82837635685893 2.04373126266451 1.61591850430789 1.0649069748539 0.214461694956285 0.211639195099887 0.226075105411257 0.216801519939874 0.213345896938717 0.213292340807445 0.221491743158159 0.214550863782809 0.228047074878655 0.211639195099887 0.213968900014692 0.215007742457055 0.229805242262123 0.216916584708679 0.217187932717796 0.216241319991978 0.211639195099887 0.22411106187983 0.215537865830637 5 5|0 +|/ 7510859 7511601 7511288.4 7510026 7511635 + gene protein_coding_gene TRUE TRUE AT5G22600.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22610.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.253835220388979 2.39802613339333 0.0361787902107816 1 2.34126458453151 3.33024555368901 0.253835220388979 0.113960136278534 AT5G18360_at 1.69968622954921 2.32741214500677 3.06227364608359 3.0051862314575 2.32316383847967 2.06242679584132 1.77962929612344 1.78096641055526 1.62135788884372 2.07632742425348 2.29075473849949 1.98772941105746 1.93246570764771 2.27652700150753 1.53082479571404 2.03714394584843 1.72636905376866 1.84157657687801 1.68435641037202 0.224304318963673 0.227102398832063 0.227256624255104 0.225500352853576 0.224423616440125 0.224304318963673 0.230156062485231 0.226091890218518 0.229724120022753 0.231563637595326 0.232227740555558 0.224304318963673 0.229854635516628 0.229186245112579 0.224926505926302 0.224870392168188 0.234038461578313 0.231396811631947 0.224817202325897 5 5 - 6080103 6080559 6080333.636 6080051 6083029 - gene protein_coding_gene TRUE TRUE AT5G18360.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18370.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G49140.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G17970.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.257849057594091 2.39792264217474 0.0361853234266642 1 2.34110699061680 4.12856197998121 0.257849057594091 0.118043628255396 AT5G62960_at 2.10020371270398 2.38653618192001 1.83404032821284 2.10563442163005 2.01425319238103 2.24457921114953 2.63719363276747 2.50747357963645 2.45226670707721 2.09800624075029 3.31815885297951 3.66936122665205 2.53404117317245 2.73185334688732 3.40555942720082 3.38433144824425 2.71007188769510 2.83941246564223 3.22933393803974 0.286986685952929 0.28477731396935 0.296837889547698 0.290001917971046 0.299736152438623 0.285869404825317 0.28477731396935 0.28477731396935 0.292823246110121 0.321672348634529 0.28477731396935 0.288439810657654 0.287862957526088 0.307819615440273 0.320307871323754 0.28477731396935 0.28477731396935 0.316090090143521 0.28477731396935 5 5|0 +|/ 25287027 25288674 25288080.429 25286508 25288867 + gene protein_coding_gene TRUE TRUE AT5G62960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.1); similar to hypothetical protein MtrDRAFT_AC124952g40v1 [Medicago truncatula] (GB:ABE93571.1) -0.225486685313662 -2.39697121035616 0.0362454395190536 1 2.33965824421262 5.06238979447432 -0.225486685313662 0.0822013299286693 AT5G09360_at 2.11508942371381 1.69776177651583 2.09395784057249 2.04043382954917 1.77791400543158 1.85006753755721 2.13414386301024 2.01992868531213 2.27357597661093 2.42801866437620 2.34701649587793 1.9725186665283 2.77780155135411 2.20884342352721 2.39783301951092 2.09906576571502 2.60335857482524 1.97862646316085 2.20658746395672 0.190768494222149 0.18740232565244 0.184494893816681 0.185572798297123 0.189945549199599 0.193912449839193 0.196724260031377 0.184406666645911 0.192171923743316 0.189259393923876 0.186276166274862 0.184768837531428 0.190900065342337 0.186923168140877 0.192151462357225 0.190799244039741 0.187248861716777 0.185498303677542 0.184406666645911 5 5 - 2906462 2907182 2906910.636 2906427 2908659 - gene protein_coding_gene TRUE TRUE AT5G09360.1 LAC14 (laccase 14); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to LAC12 (laccase 12), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G05390.1); similar to laccase [Pinus taeda] (GB:AAK37826.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.221007889645319 -2.39634195932519 0.0362852521233206 1 2.33870015321026 4.26659230189634 -0.221007889645319 0.076473406916098 AT5G28090_at 1.44298849654729 1.08427074888239 1.51857741350281 1.64917756816846 1.17729588734877 1.78313080164128 1.17226868554827 1.11007055183014 0.959312059958233 1.39477232570224 1.25254282982884 1.96812486090831 1.74100324649420 1.86635266824530 1.59227761123543 1.38316420518607 1.83659102751737 1.05893087124855 1.25342771290681 0.19391298710089 0.195098288114567 0.197767657363593 0.195782684773909 0.194360954468655 0.196227484304682 0.197281318946649 0.190459692112539 0.197270684402 0.196358553268858 0.197649884885022 0.199811614577456 0.195056441154373 0.196673634473449 0.191005948669158 0.193739160757694 0.19463782303605 0.19800638920511 0.201821597379471 5 5 + 10101095 10102234 10101759.182 10101046 10102278 + gene protein_coding_gene TRUE TRUE AT5G28090.1 unknown protein 0.264049068272914 2.39607792627085 0.0363019701386643 1 2.33829815595641 2.76216124315306 0.264049068272914 0.124387591512718 AT5G38390_at 2.1310905274618 2.17526132595988 1.80597308685639 2.23212714868281 1.89790475343503 2.05949753967616 1.75521073929220 1.83803932520580 1.87395114114328 2.31704816833509 1.78692739970196 2.11410942809668 1.94581120531986 2.65967413011965 1.89169551651027 1.75930041069341 1.94205841610012 2.12283699342115 2.25847523692559 0.175213169415014 0.183280621358385 0.173521320595414 0.173917825124686 0.164382485206141 0.166047328090451 0.168308170288751 0.172601622420039 0.17643313136058 0.1668334133744 0.167423977204705 0.163368459668020 0.168173512512428 0.163368459668020 0.163368459668020 0.166451560277175 0.179848804218119 0.170786612048297 0.166528708237405 5 5|0 +|/ 15384463 15385235 15384944.111 15383662 15385283 + gene protein_coding_gene TRUE TRUE AT5G38390.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G38386.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE85825.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.224080114528344 -2.39600073468844 0.0363068591644723 1 2.33818063161275 4.07570132396961 -0.224080114528344 0.0805273664533541 AT5G06960_at 7.42491244777115 7.15542029724902 8.18081864184128 8.28025719685684 8.4611944419851 7.8346472614889 6.93428927062627 6.61834651374225 5.30650816191894 6.11898534431925 5.84142429457319 5.99430878104823 6.06812270576158 6.03883422890462 5.22825888924762 6.0886379035706 6.87741470142492 6.36866052944673 5.59860106696914 0.196834818397953 0.193105179445101 0.194746892775568 0.187274726397605 0.191738457833438 0.195151448335829 0.196758821071052 0.190152007249481 0.201685636135052 0.195539974355047 0.184626292600781 0.185414400469103 0.186508736741781 0.190219837749294 0.198834556846899 0.183455686892689 0.190722999346074 0.189157992227903 0.192539042469844 5 5 + 2156643 2157365 2157041.182 2154781 2157647 + gene protein_coding_gene TRUE TRUE AT5G06960.1|AT5G06960.2 OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / transcription factor Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element. Identical to Transcription factor TGA5 (Ocs element-binding factor 5) (OBF5) (AtbZIP26) (TGA5) [Arabidopsis Thaliana] (GB:Q39163;GB:Q9FL50); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to bZIP transcription factor bZIP99 [Glycine max] (GB:ABI34658.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.270535356082487 -2.39087137790774 0.0366331751340172 1 2.33037307538698 13.4801887316032 -0.270535356082487 0.131213241528879 AT5G28570_at 1.62488890426515 1.92206569007029 2.14044005101029 1.85860769910094 1.81178718367290 2.27527671219519 1.97422988200964 1.79223058307258 2.30309964548484 2.13458875429668 1.84705147962209 1.99895144861351 2.29111266915660 1.73412152088363 1.97275481770563 2.25070566752708 1.88121494790551 1.48523573473206 2.41413616487345 0.183935975001571 0.179204427051636 0.179886550888872 0.187709075031957 0.179407203802326 0.186951673161365 0.183256870537595 0.201065515986422 0.179204427051636 0.188055619190929 0.183289871517924 0.179204427051636 0.184943663110525 0.187997296171587 0.194292971672757 0.184001276506938 0.185703972491030 0.18891161115768 0.191662483791116 5 5 + 10574640 10575095 10574876 10574625 10575163 + gene protein_coding_gene TRUE TRUE AT5G28570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12725.1); similar to GRF zinc finger containing protein [Brassica oleracea] (GB:ABD64950.1) -0.250501370152084 -2.38830087474836 0.036797776531737 1 2.32646184775172 4.03323336683458 -0.250501370152084 0.111575282313688 AT5G42990_at 7.57440972201739 7.8150517456236 8.19099678043075 8.23981455985196 8.26899344103281 8.01018835518362 7.85827825608549 8.0295823037854 6.86239648461023 7.23600505973698 8.26889684618578 8.4589319579169 8.22955325619929 8.14768747616236 7.49317144518306 8.5575465525309 7.9342303419364 7.79092149500426 6.90346495979418 0.17522926643602 0.167351976768085 0.168674464516872 0.167374523110964 0.169794815593989 0.171349331616559 0.168375560169910 0.163860801190949 0.198357287474369 0.173992833757789 0.162991522466781 0.162991522466781 0.166589113786252 0.172598339008543 0.169423574146815 0.168793151502747 0.184895918576851 0.178873865920153 0.173446716790443 5 5|0 -|/ 17261473 17262937 17262311.875 17261215 17263204 - gene protein_coding_gene TRUE TRUE AT5G42990.1 UBC18 (ubiquitin-conjugating enzyme 16); ubiquitin-protein ligase similar to ATUBC2-1 (Arabidopsis thaliana ubiquitin-conjugating enzyme), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G45050.1); similar to Ubiquitin-conjugating enzyme, E2 [Medicago truncatula] (GB:ABE89644.1); similar to Os12g0636800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067367.1); similar to Os03g0681400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050906.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) -0.214508918111209 -2.38813271079885 0.0368085699268659 1 2.32620600591357 15.5537841902199 -0.214508918111209 0.0684861308539064 AT5G51290_at 2.51199338008775 3.81867545157573 4.94394066709063 4.67934872465997 5.21271604213956 4.21045858033287 3.33451831825989 3.07356431710013 3.06812929010476 2.41284978670771 3.03492012386013 3.07079354989116 3.45816933135886 3.34801756370816 2.98160459977727 3.77247893222997 2.68112958272400 3.72010770989793 2.67351721662260 0.354851795003057 0.334774521995193 0.344979767995135 0.331261136557186 0.340430143897032 0.333461559454363 0.333293876978314 0.33051994473446 0.344416273631513 0.330467165879884 0.326453209495327 0.326453209495327 0.326519703712724 0.34718995688757 0.327692053097811 0.326453209495327 0.342142173679936 0.326453209495327 0.326453209495327 5 5|0 -|/ 20863085 20864399 20863450.444 20861224 20865566 - gene protein_coding_gene TRUE TRUE AT5G51290.1 ceramide kinase-related similar to diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.2); similar to Os02g0656200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047623.1); similar to putative ceramide kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD25337.1); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) 0.468841777700617 2.38752022539694 0.0368479076152925 1 2.32527421531381 6.9614359878188 0.468841777700617 0.292152149545074 AT5G50370_at 5.60123195552989 5.27269569327631 6.1465449951805 5.64807949208032 5.04223812877146 5.31273820458444 5.70660114837676 5.9451515112118 4.82707137377193 5.10122471153301 6.38330767840159 7.42997078086595 5.81229382238805 6.59839689428214 7.27699064788617 6.03578903291931 5.77628469540288 6.66971819453636 4.84903141860065 0.204010866017533 0.195894744806398 0.195894744806398 0.200038047677158 0.196834414057196 0.198219152089577 0.204033597989786 0.205396128444808 0.206883982084299 0.198243876980368 0.195894744806398 0.197755685159119 0.196897317315159 0.202642051658914 0.198067064087673 0.201047808805007 0.200606121320856 0.197350062598484 0.204393666202596 5 5 - 20526650 20527415 20527094.182 20526385 20527929 - gene protein_coding_gene TRUE TRUE AT5G50370.1 adenylate kinase, putative Identical to Adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP transphosphorylase 2) (ADK2) [Arabidopsis Thaliana] (GB:Q9FK35;GB:Q8LD90); similar to ADK1 (ADENYLATE KINASE 1), adenylate kinase [Arabidopsis thaliana] (TAIR:AT5G63400.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) -0.258875524370257 -2.38286848422318 0.0371480108776599 1 2.31819917051133 11.2962200426117 -0.258875524370257 0.120702433590040 AT5G32600_at 1.83939268347299 1.89560772752155 1.97602925487960 1.95074679458091 1.51526945975936 1.7248842045623 1.89229090205642 1.72160447524588 2.20523120377459 2.27545058436306 2.19192677352152 1.83443869525317 1.9274210051997 2.65999940190463 2.12006086919488 1.88560892896140 2.16390182725415 2.15232071771272 1.95715252630468 0.180455186990517 0.178157623337957 0.180199340085696 0.187491907905062 0.182583737750266 0.177112709728881 0.180002509709732 0.182689999789637 0.181746116111067 0.181838619796528 0.180966070047269 0.177112709728881 0.179766836581304 0.189379510889514 0.177676803356160 0.180245600105889 0.180166540834963 0.184547961030530 0.179599959330548 5 5 - 12266961 12267636 12267376 12266929 12268873 - gene protein_coding_gene TRUE TRUE AT5G32600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60930.1) -0.201666256762681 -2.38240653842829 0.0371779424882939 1 2.31749674808060 3.9459304621879 -0.201666256762681 0.0479806442200298 AT5G15750_at 6.86958353784905 7.44050373392719 7.25663554259989 7.85335348543875 7.82525067254064 7.08267803603724 7.00925015272503 7.4985624125499 4.77460213907696 4.94130280168304 6.1737676630976 6.42705419965261 6.45600392956479 6.16622581303271 5.68464445621167 6.61614468608331 5.84344922999121 5.75377461875698 5.49220617742033 0.245804922407827 0.243728011531962 0.261716674563962 0.243728011531962 0.243728011531962 0.258832164502046 0.24445674688874 0.249073876991574 0.250994665615222 0.257573030734516 0.250684694880107 0.243728011531962 0.256062484956973 0.251837415671975 0.255830712946527 0.243728011531962 0.270001730757961 0.251626922689337 0.243994157532691 5 5|0 +|/ 5141547 5142618 5142224.6 5141106 5142869 + gene protein_coding_gene TRUE TRUE AT5G15750.1 RNA-binding S4 domain-containing protein similar to hypothetical protein [Cleome spinosa] (GB:ABD96845.1); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) -0.360952930081007 -2.38160243809226 0.0372300998853998 1 2.31627412902959 12.9592289203463 -0.360952930081007 0.210021836597091 AT5G45770_at 0.856594990968669 1.07369472706858 1.42605475681502 1.32865660481750 0.941257728735097 1.31583391740254 1.01618823022756 0.955042838567768 0.187622512941722 0.678188939479426 0.0779550125824736 0.802091859332937 0.854696396059484 0.627489173843368 0.691581732745099 0.470019801030242 0.920130608686798 1.61489998500109 0.562924847622795 0.242662539524964 0.245083074103426 0.255763853249321 0.24899709010879 0.244895775669365 0.252803420211960 0.244870670531364 0.251711215848783 0.255079622511078 0.247218211873319 0.245468819261401 0.242662539524964 0.257439464188671 0.247898965140703 0.244039399208750 0.242662539524964 0.247457712442153 0.246420969044923 0.250442704578292 5 5 + 18581476 18582032 18581729.455 18580795 18582148 + gene protein_coding_gene TRUE TRUE AT5G45770.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G18760.1); similar to putative leucine-rich repeat family protein [Gossypium hirsutum] (GB:AAT64015.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.220212557054494 2.37920483861323 0.0373860415997715 1 2.31262918805342 1.73096722657943 0.220212557054494 0.0775209131367951 AT5G60660_at 2.50586205559659 2.9182228204119 3.16402028717088 3.06475214911951 2.89979218318411 2.87253122544859 2.96871654970626 3.17504312234193 3.47013514101841 3.26928038434875 4.00111701556424 3.92521448473827 4.0254716921527 3.67528181169856 4.09967471594979 3.95067505523977 4.01162911311097 3.67540824675326 3.50328937425919 0.250697319912254 0.246035637041292 0.253955436585032 0.253184584218050 0.250429358406434 0.242433472503585 0.252346727076033 0.253733791683739 0.255250681453984 0.244563060143003 0.250749969257448 0.239778583119038 0.241287057383861 0.241942513712939 0.250013892336368 0.24090695132738 0.247934993520875 0.24312901666403 0.236931350562727 5 5 - 24392937 24393619 24393276.636 24392683 24394215 - gene protein_coding_gene TRUE TRUE AT5G60660.1 PIP2;4/PIP2F (plasma membrane intrinsic protein 2;4); water channel Identical to Probable aquaporin PIP2.4 (Plasma membrane intrinsic protein 2.4) (PIP2.4) [Arabidopsis Thaliana] (GB:Q9FF53); similar to PIP2B (plasma membrane intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT2G37170.1); similar to plasma intrinsic protein 2,2 [Juglans re (GB:AAO39008.1); similar to putative aquaporin [Phaseolus vulgaris] (GB:AAY22203.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) -0.223376215579287 -2.37821721749708 0.0374504619267299 1 2.31112800689774 6.613514540844 -0.223376215579287 0.081759744685683 AT5G27650_at 5.62184930600577 5.9866902301418 6.91127481209733 6.79829801257318 7.21725902316615 6.97703652502111 6.05026304043888 5.96923650282137 5.66628741317048 6.36764367191827 6.76416093402657 6.9878157311404 6.95549193878046 6.69102207589821 6.37307881919814 6.99756699676259 6.6861596047793 6.73691445089165 6.54596203212462 0.225304591850800 0.224617944093207 0.222940925430926 0.219567148290697 0.223436009237574 0.227551685447475 0.228482071898311 0.225324798693607 0.244215724172526 0.218441121097616 0.219780700110923 0.220678178022880 0.224271996893870 0.225257233325239 0.233743809502518 0.223999343711027 0.241621136087948 0.231333293490364 0.228374109797206 5 5 + 9788539 9789065 9788816.364 9785410 9789235 + gene protein_coding_gene TRUE TRUE AT5G27650.1 PWWP domain-containing protein similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G05430.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAV24808.1); contains InterPro domain PWWP; (InterPro:IPR000313) -0.221471182682071 -2.37795360248488 0.0374676752030911 1 2.31072733718805 12.9251504438694 -0.221471182682071 0.0793309468309658 AT5G11060_at 10.0621871677582 10.0806241746009 11.0942563951488 11.0710831019791 11.3824665573973 10.9346268149247 10.3558709711604 10.1567757675618 9.8286328634504 9.84626246611902 10.6988502960108 10.3447817226448 10.5501396551730 10.6000921949198 10.0464197681170 10.7237096572483 10.6552764593647 10.4274310582658 9.56819512358178 0.0882582110234995 0.088515487360519 0.094242118525314 0.0887073955425244 0.088042420098806 0.0925618575447812 0.0892606738236589 0.0900692867073832 0.0947507837104596 0.0948517401613412 0.0945149868207526 0.0894802357021787 0.0896324063800643 0.0878585566980351 0.089690391838662 0.0878585566980351 0.097143145569508 0.099410037216569 0.0979235156587828 5 5 + 3511569 3512958 3512221.545 3510119 3513306 + gene protein_coding_gene TRUE TRUE AT5G11060.1 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription factor A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root. Identical to Homeobox protein knotted-1-like 4 (KNAT4) (KNAT4) [Arabidopsis Thaliana] (GB:P48001;GB:Q9FY59); similar to KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G25220.1); similar to Homeobox protein knotted-1-like 3 (KNAP3) (GB:O04136); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain KNOX2; (InterPro:IPR005541); contains InterPro domain KNOX1; (InterPro:IPR005540) 0.225729341319573 2.37618294695382 0.0375834934185963 1 2.30803637565331 20.7690035784090 0.225729341319573 0.0849690045719486 AT5G19960_at 5.78298324735095 5.535008576983 6.52988408356276 6.40922735050842 6.53179134471872 6.52965851680127 4.86053473633438 5.16320771663488 4.82594257149413 4.63467987504227 5.32594002346718 5.25025475769235 5.17572301489345 5.19255335524149 4.91205982554688 5.03239977404843 5.54696036804026 4.98773137364188 4.9810512844299 0.183077072917602 0.183077072917602 0.193834463911616 0.186970319203896 0.187552890788814 0.194615471310949 0.189761226709018 0.186071360304312 0.185609324853327 0.186369062894526 0.185223242802582 0.184531234182791 0.183244471254871 0.18607870269478 0.186727117668711 0.186942408271968 0.188552040321255 0.192438812562876 0.18685285376484 5 5|0 +|/ 6744791 6746109 6745467.778 6743928 6746341 + gene protein_coding_gene TRUE TRUE AT5G19960.1 RNA recognition motif (RRM)-containing protein similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.2); similar to cold inducible RNA binding protein [Danio rerio] (GB:CAK04928.1); similar to cold inducible RNA binding protein [Danio rerio] (GB:CAK04927.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.215072459628829 -2.37605935223185 0.037591590716989 1 2.30784855936208 10.9137089742253 -0.215072459628829 0.0708605421916921 AT5G38530_at 8.36870748507449 8.51315893432186 9.48416805713091 9.39118967762636 9.11229019833007 8.6501094728782 8.43868011551759 8.38744873937533 6.93107771289922 7.66363876845434 8.45472555520032 8.85526940941456 8.4107844505453 8.7205755363152 8.20383484085172 8.23014807866955 7.75382008856007 8.85079021265347 6.28310383154136 0.170549377261191 0.162741333191451 0.166270253055407 0.169251613658303 0.162741333191451 0.167769659081878 0.167972267069191 0.164749594778860 0.182279983420309 0.170833209128329 0.168904620745415 0.16320320002378 0.167085969932078 0.167632104298527 0.162741333191451 0.166119462665954 0.171801024909806 0.162741333191451 0.193549832498279 5 5|0 +|/ 15442672 15443487 15443096.222 15441268 15443700 + gene protein_coding_gene TRUE TRUE AT5G38530.1 tryptophan synthase-related similar to TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT), tryptophan synthase [Arabidopsis thaliana] (TAIR:AT4G27070.1); similar to putative Tryptophan synthase beta chain [Oryza sativa (japonica cultivar-group)] (GB:BAD37798.1); similar to putative Tryptophan synthase beta chain [Oryza sativa (japonica cultivar-group)] (GB:BAD37797.1); contains InterPro domain Tryptophan synthase, beta chain-like; (InterPro:IPR006316); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926) 0.226280028995265 2.37503172864394 0.0376589811492174 1 2.30628705575945 16.4903525646108 0.226280028995265 0.085788151846576 AT5G03310_at 0.427137041016978 0.45790999533134 0.219387205815568 0.200464631044353 0.456900962021391 0.810604230944213 0.589392687701473 0.559342504047087 0.686539191961026 0.818863965001544 -0.0175870896066417 0.207964451993691 0.959186249488911 0.792993207830112 0.386163300344619 0.310583964917630 0.762911902293598 0.521513951082937 0.666286517951139 0.191678899204406 0.190051376357793 0.189361982075218 0.187318466378495 0.188688668644884 0.189822315778883 0.186698289913862 0.192202791031926 0.189315882757583 0.193247272910402 0.189512588791003 0.194455548349376 0.202932957035098 0.197551574584601 0.189984872536179 0.189454224606288 0.189817447878297 0.194434729574799 0.192592611295362 5 5 - 799334 799610 799460 799223 799705 - gene protein_coding_gene TRUE TRUE AT5G03310.1 auxin-responsive family protein similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G37030.1); similar to Auxin responsive SAUR protein [Medicago truncatula] (GB:ABE87816.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) -0.208826021026604 -2.37418932175153 0.0377143129238641 1 2.30500711129716 1.07232380753914 -0.208826021026604 0.0617477991169424 AT5G05200_at 11.2281905003209 11.0755281982459 12.0925264956477 11.8894562879768 12.1297381983413 11.8282785364524 11.5170526560560 11.3101712546802 11.0022867704628 11.3098275296641 11.8796998677053 11.6648513440286 12.0520647950011 11.9568152207742 11.6188352497518 12.1493946204039 12.2567890113206 12.1644988841808 11.1911762239770 0.0624277252473839 0.0605296958043833 0.0614013727112329 0.063792433309885 0.0609042162532925 0.06250917820979 0.0599677178351377 0.0597036969125282 0.0680146922393393 0.0657133465794737 0.0626602666750962 0.0605180463205761 0.0598999009633918 0.0603710954840624 0.0637034439406448 0.0593877701053372 0.0611703717490473 0.065016647585978 0.0631127702564047 5 5|0 -|/ 1544249 1545145 1544590.667 1544008 1547142 - gene protein_coding_gene TRUE TRUE AT5G05200.1 ABC1 family protein similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT4G31390.1); similar to Os07g0227800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059219.1); similar to ABC1 family protein kinase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20904.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain ABC-1; (InterPro:IPR004147) 0.219306784462546 2.3732539615838 0.037775842800965 1 2.30358605837706 23.2016838320553 0.219306784462546 0.077047452091681 AT5G52660_at 6.14670779653779 6.54174885564348 7.64864834463191 7.7554971150134 8.39727686797969 8.13439929638504 6.96120312572498 7.16198654160204 5.7165113762722 6.03075391128337 6.79507473408845 6.9965152683176 7.35732562239037 7.08502474817409 6.637748539605 7.32203626219867 7.39765188196607 7.2778824173574 5.82008694527931 0.223351570215351 0.217684389424047 0.216365227964492 0.216365227964492 0.222168621235602 0.220798686763295 0.220197151936312 0.222197185863563 0.244477561147616 0.222486985574074 0.221111740816945 0.216365227964492 0.216365227964492 0.216365227964492 0.21907542028186 0.217216757923765 0.226615174623319 0.222350420254631 0.218474532376969 5 5|0 -|/ 21376651 21377727 21377240.7 21376285 21379386 - gene protein_coding_gene TRUE TRUE AT5G52660.1|AT5G52660.2 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT4G01280.1); similar to MYBR5 [Malus x domestica] (GB:AAZ20444.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.230299058062095 2.37159027948476 0.0378855245346542 1 2.30105881967286 13.8256542488767 0.230299058062095 0.091062392791582 AT5G27530_at 2.27381541607933 1.98137777266844 2.50147372581072 2.69006108540956 1.90870117730953 1.94282201646230 2.17561385114363 2.53346532011648 2.45394491831729 2.28111999391019 2.27076638475251 2.12607457143722 2.40404918868454 2.67686498899846 2.16406395411420 2.38099855223888 1.8512956764013 2.51423879988006 2.22713395095469 0.232489859694701 0.224989183444908 0.225531622242938 0.231593019007854 0.222825309332412 0.222706970382959 0.222235824968812 0.224068829324234 0.218950644922095 0.219424140593638 0.220802536568171 0.224885860220024 0.224665696760038 0.224827404908500 0.226368604940304 0.223696387281624 0.248737938348180 0.223677133107216 0.219733361419754 5 5|0 +|/ 9719914 9721076 9720732.375 9717506 9721100 + gene protein_coding_gene TRUE TRUE AT5G27530.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT4G35670.1); similar to Glycoside hydrolase, family 28 [Medicago truncatula] (GB:ABC75354.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743) -0.226284020921029 -2.36834826135366 0.0381001519044405 1 2.29613518060517 4.56055478010372 -0.226284020921029 0.0865804214215824 AT5G28950_at 1.75850293879494 1.96156226933271 2.13086266310964 2.62463886298847 1.51422363753428 1.91116955573848 1.67714430268659 2.34770220374294 2.58968420529821 2.44452570897341 2.04685342706480 2.49467647871405 1.90346071726226 2.06856072661345 1.69504227464817 2.37909743068122 2.01733836023631 2.15728038047577 2.24804229046307 0.174094310106461 0.179877933141077 0.168152831783972 0.179899257261837 0.171200398811978 0.169448045140238 0.169187462214677 0.170667429268760 0.180242563149545 0.174666669074436 0.168152831783972 0.168808691383797 0.189041517437368 0.183433268565460 0.175165826318801 0.177041792983319 0.174826215003381 0.173447684330853 0.170156644072874 5 5|0 +|/ 10992548 10993364 10992880.875 10992509 10993439 + gene protein_coding_gene TRUE TRUE AT5G28950.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41980.1); similar to transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa (japonica cultivar-group)] (GB:ABA96611.1); contains domain gb def: SI:dZ173M20.16 (Novel transposase) (PTHR22930:SF4); contains domain FAMILY NOT NAMED (PTHR22930) -0.303248468629488 -2.36820472647764 0.0381096814495686 1 2.29591723136645 4.25207886726112 -0.303248468629488 0.163466778458074 AT5G61720_at 0.639754658590164 0.866255393192209 1.09056814497690 0.546510391170963 0.469468817093329 0.671027161543329 0.649016936223316 0.754644784862965 1.84182779077095 0.275409052890917 0.540165585261871 0.360803002610821 -0.165057241923665 0.714887560620022 0.383971020859046 0.804241105902405 0.393760241406591 0.770082265360498 0.373370005505004 0.188506301879861 0.187802898849980 0.196154312396933 0.191106374749809 0.187802898849980 0.196839629113279 0.190006469090638 0.193091670787527 0.193111583652356 0.199961320657511 0.187802898849980 0.195226741112881 0.200752685374891 0.198556654863904 0.200431612785488 0.191637423031485 0.189902406108469 0.195602314713302 0.191503784205514 5 5 + 24819566 24820197 24819834.818 24818780 24820395 + gene protein_coding_gene TRUE TRUE AT5G61720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28830.1); contains InterPro domain Protein of unknown function DUF1216; (InterPro:IPR009605) -0.246175289037207 -2.36737061562772 0.0381651054881287 1 2.29465074481195 1.36368527374056 -0.246175289037207 0.109324047120830 AT5G15510_at 0.717117651750157 0.856230751313962 1.21161550177919 1.23714125707471 1.16933159796183 1.08078575644406 1.15208196491063 0.822055098291209 1.23942300230310 1.64137624481314 1.39526512315470 1.74341935282435 1.38454107015641 1.30386433571439 2.00196153766295 1.67666836286419 1.78983874264412 1.81446671707390 1.14314587718582 0.160324542493022 0.168059188767472 0.159454178405408 0.154843746592573 0.161969959645419 0.154843746592573 0.156531729011080 0.159762744536657 0.164100403405562 0.161267436949249 0.154843746592573 0.154843746592573 0.155381563665158 0.158016141218536 0.160365185380678 0.156958767127940 0.159844593802781 0.166635856869595 0.159399736858258 5 5|0 +|/ 5035483 5036591 5036195.222 5034123 5036798 + gene protein_coding_gene TRUE TRUE AT5G15510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01015.1); similar to EGF-like [Medicago truncatula] (GB:ABE89479.1); contains InterPro domain Targeting for Xklp2; (InterPro:IPR009675) 0.209565572494059 2.36629490153067 0.0382366990145274 1 2.29301757110291 2.52082904578867 0.209565572494059 0.0639979725841671 AT5G64610_at 7.28421974794571 7.5705560772134 8.1781788119946 8.20209601408554 8.88203561354196 8.75162803680696 6.99181938702458 7.33397295604428 6.62427073468121 6.13803561574068 7.8319202502916 7.782549899648 7.54056117990698 7.47858670252614 7.31420397065282 7.9009691915482 7.54110954613903 7.32472254108529 6.3655031870971 0.226370696654363 0.226191020901719 0.231468870198057 0.243233350239404 0.234183634397655 0.230103265030686 0.240341179190076 0.226191020901719 0.232468835225253 0.250688508975899 0.230910254892193 0.226191020901719 0.226191020901719 0.233067726335136 0.230553928897822 0.228518955531787 0.230555369439994 0.236034886876697 0.23814150951127 5 5|0 -|/ 25845628 25846378 25846012.889 25845386 25847750 - gene protein_coding_gene TRUE TRUE AT5G64610.1 histone acetyltransferase, putative Identical to Probable MYST-like histone acetyltransferase 1 (EC 2.3.1.48) (HAG4) [Arabidopsis Thaliana] (GB:Q9FLF7); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G09740.1); similar to histone acetyltransferase protein HAC108 [Zea mays] (GB:AAM89290.1); similar to MYST-type acetyltransferase [Solanum chacoense] (GB:AAQ24535.1); similar to 181 [Daucus carota] (GB:BAA32822.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.221315515079726 2.36627980196642 0.0382377048858790 1 2.29299464784638 14.8819455419477 0.221315515079726 0.0805468105857709 AT5G61480_at 3.91892373082014 3.75890529686921 3.67317376519352 3.82816996947123 3.8187815738925 4.02292179698357 3.72528602637927 3.96412152033704 3.83169526872977 4.07776184061258 5.50129754873756 5.73799472462446 5.02471306010792 5.39815952167854 5.86801600458205 5.09323995488492 4.75829440800535 4.94111307733132 4.40220635405638 0.185544058323222 0.185133052498407 0.182395736210684 0.186584690951349 0.189013447093199 0.201921489266850 0.180544628821404 0.197860803658860 0.191196536958391 0.180755018140622 0.192926580811755 0.196527834674573 0.195761611907076 0.187614150647391 0.190211611131806 0.184584116439113 0.187251430608252 0.188958656574594 0.185948678494237 5 5 - 24741846 24742502 24742217.545 24741767 24745068 - gene protein_coding_gene TRUE TRUE AT5G61480.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G28650.1); similar to CLAVATA1 receptor kinase (CLV1) [Arabidopsis thaliana] (TAIR:AT1G08590.1); similar to BAM1 (big apical meristem 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G65700.1); similar to putative receptor-like protein kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:AAP68887.1); similar to Protein kinase; Actin-binding, actinin-type [Medicago truncatula] (GB:ABE92015.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17351.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.211059266787029 -2.36348416232228 0.0384243829151917 1 2.28875107121181 8.53590613930677 -0.211059266787029 0.0666530874899634 AT5G19030_at 4.08485849364201 4.09513959179843 4.34527543542868 4.81642929157174 5.02548071060562 4.46839742347563 4.38807049543009 4.21658446526261 3.44202727337658 3.25183739123880 3.78650732103035 3.39555715577877 3.81206126367522 3.96162612825277 4.01376195594203 4.36170034651947 4.18362388851045 3.92213467538224 3.56710315247684 0.222197243735649 0.224292201039742 0.230915664920715 0.23822277452005 0.229071929853103 0.242580207019387 0.225715665962586 0.22070234209392 0.232249379965317 0.22070234209392 0.228659649436269 0.233599201094295 0.224475788864416 0.231501228040124 0.222641636624359 0.223563753732831 0.225195541216694 0.227959529686286 0.224525130131004 5 5 - 6357776 6359019 6358500.091 6357385 6359126 - gene protein_coding_gene TRUE TRUE AT5G19030.1|AT5G19030.2|AT5G19030.3 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G20030.1); similar to PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 (inducible form) isoform 1 [Mus musculus] (GB:XP_917137.1); similar to Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp (GB:1X5S); similar to Os03g0278800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049729.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G08000.1); similar to PREDICTED: similar to poly(A) binding protein, cytoplasmic 4 (inducible form) isoform 1 [Mus musculus] (GB:XP_917137.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) -0.265856866659135 -2.36320398125229 0.0384431406900112 1 2.28832584239281 8.10500158719376 -0.265856866659135 0.129714935868193 AT5G14040_at 9.80657780624722 9.70452850269616 10.4929348807227 10.4928778567016 10.0777021120050 10.1242095161229 10.0617822989666 10.2786104168157 9.19702912408977 9.1187687700304 10.4490896682177 10.7401632686518 10.4757364734092 10.3878197298493 10.8109359761997 10.4373820600234 10.2429022377883 10.2048803096498 8.88502239561009 0.0958750746879716 0.0955541999886709 0.0991754497394364 0.096121803806129 0.0966959698683987 0.100625925138359 0.096929871761976 0.0973208692388735 0.118281850558358 0.106698490384087 0.0953949558756314 0.0949805049211154 0.095816614769541 0.100137153803117 0.0950058214184215 0.095392762283627 0.101969575423310 0.095780259770405 0.110621634387220 5 5|0 -|/ 4531071 4532040 4531529.3 4530645 4533072 - gene protein_coding_gene TRUE TRUE AT5G14040.1 mitochondrial phosphate transporter similar to mitochondrial phosphate transporter, putative [Arabidopsis thaliana] (TAIR:AT3G48850.1); similar to mitochondrial phosphate transporter [Glycine max] (GB:BAA31582.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.197197724655855 2.36208674277624 0.038518026956678 1 2.28663033664089 19.8976798298100 0.197197724655855 0.0422449917442688 AT5G51390_at 3.56100207508498 3.35158661728751 3.45118610062178 3.39000106511793 4.64536681547335 5.06896816778678 2.62965573292928 2.37517551339136 2.95001221344083 2.82323234200142 3.1197113241195 3.13650828740724 3.48036675508153 3.67421862771772 2.97327997704370 3.35524776024953 3.89484846156497 3.00163200546666 3.04337008835641 0.225973878419062 0.228142781067087 0.231319013268254 0.223776965826774 0.23278163166322 0.247883445024163 0.228639019977028 0.223293103419971 0.234156395712682 0.229384216264523 0.227350928278644 0.225324055231451 0.225970183927517 0.229639486256780 0.22323721876851 0.22323721876851 0.226092680271221 0.228527235924684 0.229461922918157 5 5 - 20895305 20895605 20895477.909 20895193 20895690 - gene protein_coding_gene TRUE TRUE AT5G51390.1 unknown protein 0.230993600476319 2.35774154374524 0.0388106270320469 1 2.28003794121417 6.69329185984374 0.230993600476319 0.0934810363880627 AT5G10740_at 5.71653713626784 5.41757121763844 7.16770106694623 7.02477785309118 6.51174640021353 6.25078485412606 3.37242198051914 3.53823455954749 4.1089000669886 3.20902117564962 2.91720926888129 3.08425361921349 3.67790715171821 3.78110954406653 2.57410033893558 4.3064324049157 4.44127767038436 3.21288090335661 3.38422172745311 0.243082870988763 0.246549303006862 0.250732119338804 0.254259226719331 0.246426183710556 0.260370415726983 0.241270723749141 0.242657031367261 0.242664304184175 0.243360472869891 0.246711637254083 0.244286671700535 0.249734673981616 0.241270723749141 0.249786788272265 0.243046562292265 0.255087484502322 0.254938748172339 0.241624486827136 5 5 - 3393822 3394656 3394077.273 3393570 3396201 - gene protein_coding_gene TRUE TRUE AT5G10740.1 protein phosphatase 2C-related / PP2C-related similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT5G24940.1); similar to protein phosphatase 2C [Mesembryanthemum crystallinum] (GB:BAB88944.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.218902371085047 2.35768017381157 0.0388147750300749 1 2.27994485354236 9.15836055990095 0.218902371085047 0.0784306962985663 AT5G40980_at 1.97606386647388 2.21898682130861 2.18450588854509 2.42330599234106 1.78398468960064 1.96925715388174 1.89371923705252 2.86555131081230 2.10901604714641 2.55212984716289 4.21355346449739 5.14139033129092 3.2728470680946 3.61909835083055 4.41020103682783 3.8038219374188 2.17113230162661 3.66368739402246 2.45552581355835 0.224083727350413 0.222268172084819 0.228909235242188 0.226319584721731 0.221757756234109 0.220507770408712 0.218262132250242 0.218328653667541 0.231059871675546 0.225195917023145 0.225657255851883 0.219710340041285 0.223571429259879 0.220703982343887 0.220240701802039 0.221971180576486 0.236091979543061 0.221254235092140 0.221095842328134 5 5 - 16432110 16432288 16432195.364 16432076 16432448 - gene protein_coding_gene TRUE TRUE AT5G40980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01940.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84797.1); similar to Os01g0923200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045237.1) 0.321934082404706 2.35484095774587 0.0390071493827258 1 2.27563888629212 5.24401706410132 0.321934082404706 0.181073448117312 AT5G20590_at 4.4148809006996 4.60008835770645 5.34934708444402 5.30302173834017 5.68567033778194 5.23087846996552 5.03179951120733 5.38917803225447 4.02440630397435 4.84865719409387 6.12953550895332 6.23389396241253 5.76705530232503 5.54438822661195 5.54446866715025 6.16403943857972 4.99897703645975 5.12503821281645 5.53518164148724 0.248503557140392 0.227977605245203 0.236551047153871 0.233893307429778 0.227977605245203 0.236927298717415 0.227977605245203 0.230191144043689 0.264117792005791 0.234351579176756 0.236826810289044 0.232395938844691 0.23311518120266 0.239496958549262 0.231739414673992 0.227977605245203 0.250309669739999 0.245680646743867 0.235584845656893 5 5|0 +|/ 6965053 6965966 6965596.9 6963440 6966228 + gene protein_coding_gene TRUE TRUE AT5G20590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G60790.1); similar to lustrin A-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35858.1); similar to Os06g0659400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058264.1); similar to Os06g0207500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057100.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -0.241171730808614 -2.35411893442706 0.0390562184092252 1 2.27454406201982 10.3711945161827 -0.241171730808614 0.105407607114551 AT5G17700_at 2.21539561909752 2.84580888855846 1.33423929525302 1.69480124768058 1.47970486764009 1.47185187614583 3.31923014300678 4.09503456238063 2.16888974366894 2.73117946041945 3.62880249165991 4.71554821993647 3.90318106901946 3.55516365060297 4.41110565192373 6.32683819934651 3.05147011649979 3.91407880430343 2.50815874170986 0.284639750412714 0.284639750412714 0.287751101646305 0.289401395947362 0.295576782389954 0.297869311860716 0.298037079740471 0.29209283513309 0.298170746934703 0.286907591323038 0.290205946312059 0.293226850317602 0.290469488873099 0.289462811828451 0.284639750412714 0.302720201561087 0.290309332043642 0.297711942652268 0.284639750412714 5 5|0 -|/ 5831046 5832100 5831540.111 5830583 5833903 - gene protein_coding_gene TRUE TRUE AT5G17700.1 MATE efflux family protein similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G03620.1); similar to Os11g0126100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065623.1); similar to Multi antimicrobial extrusion protein MatE [Medicago truncatula] (GB:ABE91544.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) -0.325179482130712 -2.35408100163591 0.0390587979954186 1 2.2744865457025 5.63584973280917 -0.325179482130712 0.183907527092220 AT5G60880_at 2.00941844055345 1.79422494271048 2.19884280045698 2.04042499216324 2.20290024240624 1.83556097598289 1.96836559754178 1.6237488440326 2.75026352214948 2.70814806790055 2.09263694807590 2.11237179757515 2.62131963608901 2.24139148485429 2.40324235976599 2.31479440367868 2.33099778844174 2.49329755310757 2.33581390502787 0.206555823649251 0.210703978794732 0.203852182187252 0.196104460313279 0.204600524190185 0.199131057186505 0.200385600720472 0.202153823971834 0.215048977078761 0.211847615665269 0.199604366503258 0.198946742771266 0.198510402030759 0.201586072463107 0.197936743044907 0.203373226232087 0.202197993103116 0.202060495676651 0.196761433705291 5 5|0 -|/ 24505793 24506630 24506266.9 24505515 24507004 - gene protein_coding_gene TRUE TRUE AT5G60880.1|AT5G60880.2 unknown protein -0.235076778396632 -2.3536323533478 0.0390893204833173 1 2.273806291174 4.42135168521821 -0.235076778396632 0.0986720129811983 AT5G66390_at 0.779413573233891 0.784290111642369 1.14196938038460 0.87213963310601 0.750655832904566 1.08256707612524 0.78834643704485 0.740806253767184 1.26802685490306 0.67851221987977 0.890809044069219 1.05563764392195 1.37173581093791 1.32224184479147 1.32116444546320 1.14137868644336 1.23652741717322 1.46113477016436 0.621653797230525 0.175560557765431 0.178715254494974 0.183302699398571 0.186910371520599 0.179790055505086 0.186861744912092 0.185974162027167 0.175560557765431 0.183971876865172 0.182283532926734 0.179536420063421 0.175791572561190 0.186564872480115 0.182283162695445 0.175966575808254 0.177402923075669 0.176756797597335 0.192423007792786 0.179537044845347 5 0|5 /|- 26533301 26533931 26533656.3 26533142 26534617 - gene protein_coding_gene TRUE TRUE AT5G66390.1 peroxidase 72 (PER72) (P72) (PRXR8) Identical to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a) (PER72) [Arabidopsis Thaliana] (GB:Q9FJZ9;GB:Q43736); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT4G36430.1); similar to hypothetical protein [Thellun (GB:ABB45838.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.215375219097241 2.35100049344372 0.0392688384680282 1 2.26981641535613 1.90809503654694 0.215375219097241 0.0744853117297384 AT5G54660_at 5.9893894771628 6.207973459287 8.2423353793067 8.17759557047152 7.58643047187736 7.38326131518361 7.56671302429997 7.83129330160984 6.77894231498861 7.36022153221251 8.15994902572823 8.49565712577785 8.5850729881332 8.4341413368672 8.17375715853134 9.09426922361015 8.77187510890559 8.32289542324044 7.12207149898366 0.171265932746706 0.166058037372322 0.162517411608751 0.158837620887062 0.162283498333908 0.168563269690986 0.167167902465721 0.163082217452878 0.185183355989093 0.177075156556228 0.167874923298494 0.164107802602921 0.157414581739028 0.163199587263477 0.157666126642738 0.157414581739028 0.175651020323409 0.16169697063645 0.183664782708242 5 5|0 +|/ 22221209 22222136 22221694.9 22221131 22222378 + gene protein_coding_gene TRUE TRUE AT5G54660.1 heat shock protein-related similar to 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) [Arabidopsis thaliana] (TAIR:AT1G53540.1); similar to small heat shock protein [Retama raetam] (GB:AAL32036.1); similar to Os05g0500500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055964.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.21179144545101 2.34698065613143 0.0395445756849285 1 2.26372447416009 15.1690143111886 0.21179144545101 0.0699215006054517 AT5G05030_at 2.38911881381193 2.32944326057917 2.53823661974564 2.05168419756598 1.98760443618576 1.95907227674063 1.88568216110728 2.24225428451033 2.77422600321279 2.39270785061654 2.21177624055593 2.38777768947097 2.47291745675717 2.48193217632167 2.60547447926152 2.11195696420438 2.91999794851114 2.91982829740537 2.16774934161141 0.194659301081195 0.19759214017466 0.200309212551458 0.203324487436437 0.195077691345025 0.192253288611419 0.193392639169366 0.192253288611419 0.20618858964573 0.201746757053615 0.19297633575024 0.194508235424589 0.192360926235297 0.192253288611419 0.196685158350659 0.195742861487544 0.197755137374102 0.19554252009869 0.196847399671845 5 5 - 1484246 1484841 1484574.909 1484178 1486066 - gene protein_coding_gene TRUE TRUE AT5G05030.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11660.1); similar to hypothetical protein 25.t00048 [Brassica oleracea] (GB:ABD64955.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.239980432188458 -2.34597357874835 0.0396139491308701 1 2.26219867798696 4.65231303380147 -0.239980432188458 0.105016122728857 AT5G48800_at 2.57610906231702 2.67859986342881 3.01491012120586 3.43538834250115 2.98786404056037 3.72439211576963 2.34186693301809 2.28182003375996 2.22183066083726 3.65362391372865 3.7028902409004 4.21945508351843 3.38805834890402 4.17896387588777 3.91025351107296 3.67968314976147 3.65491015686767 3.84627768950594 3.43311863915887 0.220920743118413 0.230087696103720 0.216491239129066 0.217554175000130 0.218316653741848 0.223426899136260 0.220534930483223 0.222679757541517 0.235596607323705 0.219539633707984 0.215693989140032 0.221759617466749 0.231256574857612 0.232450887665077 0.224894761409289 0.218153527530993 0.223800424982818 0.221952412017111 0.225877804756866 5 5 + 19805565 19806155 19805859.545 19803990 19806355 + gene protein_coding_gene TRUE TRUE AT5G48800.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G03010.1); similar to transposon protein, putative, Mutator sub-class, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91176.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.283193807469405 2.34388439465097 0.0397582413514839 1 2.25903392306701 6.34282843655041 0.283193807469405 0.148200434797221 AT5G37890_at 4.85422159050298 4.51426457957092 5.41342354458001 5.45649303989395 6.30976398473389 5.85722343029939 4.61455496739635 4.74038471517857 4.26037780575102 3.35045317728586 4.54327890692477 4.77157561003568 4.99289144178105 5.09665009030053 5.22560938629102 4.98020603431615 4.73743075093525 5.10599650156188 3.63427081087309 0.232230911686364 0.230860785859602 0.233649068688144 0.234715206958391 0.239001212449803 0.2355678881369 0.227795888180007 0.229355335255125 0.230093415258848 0.232166791665419 0.233477461800271 0.234188745226953 0.233271301054313 0.232340261772235 0.231921879761302 0.227795888180007 0.229418779986924 0.235340108704785 0.24174833040651 5 5 - 15107892 15108310 15108099.818 15107516 15109124 - gene protein_coding_gene TRUE TRUE AT5G37890.1 seven in absentia (SINA) protein, putative similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G37910.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.235796232355147 2.34367770594972 0.0397725442693792 1 2.25872086287492 9.56007728397198 0.235796232355147 0.100617831521934 AT5G23420_at 2.92793990714117 2.78465409048943 3.91228001860669 3.92796479399303 2.86567588000789 2.73344288422404 3.33167510476518 3.36409695280157 2.18517672185134 2.91975781190283 3.84780630132211 4.15939714953922 3.192912727677 3.63853746809507 4.29723643076275 3.55068341195395 3.44123162937605 3.29876150164295 2.61359205413673 0.185880383778782 0.177135575257212 0.174469379051378 0.18123398496318 0.180883671842929 0.189188204875365 0.173764414932717 0.174639884343987 0.181857613369791 0.178532066086650 0.181666934135590 0.184842733560082 0.180060546804194 0.180417463064880 0.185577382241491 0.178889821186573 0.173410893671220 0.175685335759856 0.177147319915601 5 5|0 -|/ 7889284 7889813 7889605.5 7888516 7890183 - gene protein_coding_gene TRUE TRUE AT5G23420.1 HMGB6 (High mobility group B 6); transcription factor Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins similar to high mobility group (HMG1/2) family protein [Arabidopsis thaliana] (TAIR:AT5G23405.1); similar to HMG-protein [Plantago major] (GB:CAJ38371.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.192323410482911 2.34260598925258 0.0398467874724386 1 2.25709770061817 6.35654771575851 0.192323410482911 0.0343126767079636 AT5G39320_at 2.80558200552613 2.68596229313662 2.30303278349005 2.13171764349484 1.66117201757101 1.99145629100138 3.01463577123015 3.13411297381986 3.29841127251426 3.43565991539336 5.41164827826384 7.3882158499239 3.6298692903952 4.23421405309591 6.78615034360959 4.2836900572814 3.61370746006080 4.94683222582378 3.68914056929153 0.203738345384052 0.201244305829823 0.206801667563478 0.203300607936808 0.206061892614031 0.213744663003564 0.209956809750338 0.205391618853255 0.212666714002541 0.218965950299946 0.200184765884198 0.203770231356845 0.205132516394628 0.206801380247740 0.218835925098790 0.205702965606451 0.203590070996975 0.200184765884198 0.208689380980453 5 5 + 15761326 15761882 15761622.091 15759990 15762171 + gene protein_coding_gene TRUE TRUE AT5G39320.1 UDP-glucose 6-dehydrogenase, putative similar to ATUGD1/UGD1 (UDP-glucose dehydrogenase 1), UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G26570.1); similar to UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G29360.2); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G15490.1); similar to UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (GB:Q96558); similar to putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum] (GB:AAT40105.1); similar to putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum] (GB:AAT40106.1); contains InterPro domain UDP-glucose/GDP-mannose dehydrogenase; (InterPro:IPR001732); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927) -0.211769435560792 -2.34061130687982 0.0399853273346559 1 2.25407715398436 6.72155640434535 -0.211769435560792 0.0707241734364418 AT5G52010_at 6.99611324552449 7.10015070388002 7.70940363518813 7.50862074967108 8.0115742799056 7.5968054424206 7.53352578346917 7.22238324234499 6.93399110245649 7.27699317011555 7.8591135722455 8.41809323132182 7.77490975850552 7.9646383798984 8.35383989723578 8.217134011409 8.24875241860409 8.02453070771821 7.12494601117998 0.205885424266912 0.190546919709877 0.196584292742861 0.192709972980564 0.197132030031626 0.191810227297433 0.201444843492866 0.197808146229359 0.221798399386773 0.198831198311043 0.193695385321703 0.194220594089210 0.197753317739144 0.194518380014453 0.198054558165276 0.190546919709877 0.192180275655097 0.19556205868947 0.190792836562541 5 5 - 21138933 21139427 21139190.727 21138718 21140211 - gene protein_coding_gene TRUE TRUE AT5G52010.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G12240.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE86261.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.233002985902322 -2.33968053647717 0.0400501334058029 1 2.25266790658506 15.0696237644845 -0.233002985902322 0.097891507454658 AT5G12860_at 11.0578912833489 11.1576929187546 11.5969931715842 11.5342833662786 11.1970492570863 11.3433980968737 11.8215948144743 12.1340974364914 11.8468914107491 11.832979613786 12.6688284538350 12.7897640883983 12.3065578266921 12.4929155523210 12.6837943606394 12.4911146053685 12.0721927097850 12.5125815345870 11.5944300904680 0.0706410654251507 0.0655273156630089 0.0681906063085085 0.0689418602550341 0.0667535726128168 0.0692791190806334 0.0660738284810194 0.0694547819165443 0.0731693718736141 0.0666176190341976 0.0654904815917177 0.066717039105221 0.0669806113384743 0.0685501510214107 0.0694738239488367 0.0654904815917177 0.074817717712183 0.0699569771093107 0.066286863118445 5 5 - 4059969 4060478 4060174.182 4059689 4061953 - gene protein_coding_gene TRUE TRUE AT5G12860.1 DIT1 (DICARBOXYLATE TRANSPORTER 1); oxoglutarate:malate antiporter similar to DCT/DIT2.1 (DICARBOXYLATE TRANSPORT), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64290.1); similar to putative plastidic 2-oxoglutarate/malate translocator [Mesembryanthemum crystallinum] (GB:BAD91178.1); similar to 2-oxoglutarate/malate translocator, chloroplast precursor (GB:Q41364); similar to plastidic 2-oxoglutarate/malate transporter [Zea mays] (GB:BAD06219.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) -0.206594650641365 -2.33916183420125 0.0400862929089283 1 2.25188261762603 23.610534549672 -0.206594650641365 0.063104177971355 AT5G61570_at 1.78436786145777 1.81475628513706 1.47133806345519 1.36991626374904 1.99058595697206 1.78270815505485 3.26834093637203 3.1013864177192 2.02157581150292 2.11666943947176 3.3315449596143 3.56195152984853 3.07971076389569 3.08461414267658 3.43168212116788 2.76635110078808 2.28740785940507 2.50472593645907 2.16123763438405 0.226824182769417 0.219153455349205 0.22541102658278 0.218962876574772 0.217208222299273 0.229866778804471 0.219624697679021 0.224230735012396 0.224584155529156 0.220371527763066 0.217208222299273 0.224214110719352 0.224211542829042 0.225352704292834 0.219821409885344 0.217208222299273 0.223259098237049 0.219723789389933 0.221988761432041 5 5 + 24776230 24777370 24777064.818 24775573 24777878 + gene protein_coding_gene TRUE TRUE AT5G61570.1|AT5G61570.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07620.1); similar to protein kinase [Sisymbrium irio] (GB:AAR15438.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G07620.1); similar to protein kinase [Sisymbrium irio] (GB:AAR15438.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.198846479609878 -2.33909055461286 0.0400912643886444 1 2.25177470731717 4.62583808258206 -0.198846479609878 0.0496449251598699 AT5G15460_at 6.31537642585877 6.01468466143744 7.54173140265798 7.08527021212101 7.89860187286106 7.4037369874745 6.88840129322686 6.17516164362465 5.64608154742412 6.7061898597926 8.02563534837088 8.17941829543752 7.81191978623122 7.89964058857069 7.67420457886806 7.60307539844456 7.57871413539051 7.52148320800463 6.30954621342725 0.183308520371394 0.175278602108259 0.176036401480775 0.183214297498428 0.168941693541483 0.179734521498825 0.177672091932018 0.179224982043326 0.199667427551749 0.176934740030948 0.172964228952572 0.173952319701094 0.171949347692298 0.171758888187528 0.176286571860103 0.171904452141913 0.188331531168124 0.181417743336769 0.175266531557533 5 5 - 5018957 5020053 5019632.091 5018714 5020706 - gene protein_coding_gene TRUE TRUE AT5G15460.1|AT5G15460.2 MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2) Identical to Membrane-anchored ubiquitin-fold protein 2 (Membrane-anchored ub-fold protein 2) (AtMUB2) (NTGP5) (MUB2) [Arabidopsis Thaliana] (GB:Q8LCS8;GB:Q9LF36); similar to MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G01050.1); similar to ubiquitin-fusion protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96722.1); similar to Os03g0426800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050409.1); contains domain no description (G3D.3.10.20.90); contains domain Ubiquitin-like (SSF54236) 0.315516142984301 2.33815066287496 0.0401568742150685 1 2.25035187973901 13.9190542078892 0.315516142984301 0.177528648615435 AT5G50230_at 8.48545818215778 8.65900143530831 9.70268007903919 9.49923215143415 9.6277760880015 9.7086974590852 8.20269139016261 8.46671676053528 8.66183993565456 8.21376393863907 9.22975927387764 8.99461677913943 9.32604904899542 9.3297358891652 8.94993067731783 9.42903995635682 8.8389354751773 9.04955045003429 8.11217028552953 0.139900891937629 0.128042434612284 0.136555551806036 0.134746330230265 0.131799632569216 0.132725587676841 0.138985986611051 0.142703205458302 0.160592619943545 0.140460046299538 0.136206703169364 0.135803252597283 0.131311671483719 0.136913146435931 0.133032789600022 0.132489206407953 0.147661255858413 0.140155411353346 0.152173279219724 5 5 - 20465886 20466413 20466138.545 20465596 20468107 - gene protein_coding_gene TRUE TRUE AT5G50230.1 nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to Os03g0746600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051251.1); similar to putative WD-repeat protein [Oryza sativa (japonica cultivar-group)] (GB:AAK71564.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.208597538980137 2.33687851389624 0.0402458433854798 1 2.24842630075676 17.7803868167317 0.208597538980137 0.0665228035244785 AT5G16390_at 9.12167663051431 9.52080823583414 9.1202382791848 9.23970189516787 9.76197698467012 9.62488247661839 9.60110963461458 9.62990682105568 9.81703437765224 9.57813092019203 10.8074703837253 11.0290998277502 10.4500196251439 10.5424948129604 11.0220512119045 10.4163729736423 9.91174572818872 10.7131187692768 9.51738030210468 0.107304882880692 0.101311800506377 0.115921848908418 0.104853166519510 0.105967158253757 0.105295638548655 0.103273946158808 0.106072237443423 0.108262587250571 0.102455732962740 0.101127927338814 0.101127927338814 0.101152949378044 0.108428372477445 0.102754983951963 0.101127927338814 0.106672006896345 0.101127927338814 0.103612304472878 5 5|0 -|/ 5361286 5362237 5361819.778 5360804 5363129 - gene protein_coding_gene TRUE TRUE AT5G16390.1|AT5G16390.2 BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A (BIOTIN CARBOXYL CARRIER, BIOTIN CARBOXYL CARRIER PROTEIN 1); biotin binding Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex. Identical to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (CAC1) [Arabidopsis Thaliana] (GB:Q42533;GB:O04845;GB:Q9LL78); similar to BCCP2 (biotin carboxyl carrier protein 2), biotin binding [Arabidopsis thaliana] (TAIR:AT5G15530.1); similar to acetyl-CoA carboxylase biotin-containing subunit (GB:AAC49114.1); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin-binding site; (InterPro:IPR001882); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Single hybrid motif; (InterPro:IPR011053)|Identical to Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP) (CAC1) [Arabidopsis Thaliana] (GB:Q42533;GB:O04845;GB:Q9LL78); similar to BCCP2 (biotin carboxyl carrier protein 2), biotin binding [Arabidopsis thaliana] (TAIR:AT5G15530.1); similar to acetyl-CoA carboxylase biotin-containing subunit (GB:AAC49114.1); similar to acetyl-CoA carboxylase (GB:AAB51193.1); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Single hybrid motif; (InterPro:IPR011053) -0.215130852977847 -2.33584896043484 0.040317986293004 1 2.24686811586211 19.5770685529860 -0.215130852977847 0.0760656998082211 AT5G54020_at 0.690049000155973 1.07573075329183 1.45515648758525 1.48662478965554 0.929557076677436 0.98787131175792 1.24550752187914 1.34356309288921 0.987897336200592 0.876580944694162 1.38400155296788 1.33833627907456 1.40560875721068 1.34787162902406 1.39629517556895 1.40061631720847 2.11370143984133 1.15259790462127 1.11178945598508 0.202914085587108 0.206735314247112 0.209469779417992 0.210985315207666 0.206841544281811 0.208560878970635 0.206821917278595 0.210846415922273 0.213990558008862 0.202914085587108 0.209233205329782 0.202914085587108 0.207660763431013 0.213544796605195 0.211940050840420 0.204888161794432 0.211085422286783 0.209444367430317 0.209599729118497 5 5 - 21939091 21939656 21939330.182 21939090 21940760 - gene protein_coding_gene TRUE TRUE AT5G54020.1 similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54040.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54050.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44770.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.210660121741911 2.33524672640520 0.0403602441724814 1 2.24595673998771 2.36899144301967 0.210660121741911 0.0698155178435507 AT5G20640_at 3.09321157417289 3.22892442131946 3.24579770648432 3.38375222842192 2.91322613464652 3.50333336905632 3.22108831373889 3.26737090969784 2.81869718707489 2.99042956135674 3.28122887651092 3.14809104462457 3.50492130871015 3.50655006682743 2.72366304773634 3.30346660849747 3.2037262201074 3.29699320446189 2.69434066580738 0.217040677403686 0.217486428674895 0.207449144373957 0.207449144373957 0.211409268326472 0.213900873604588 0.227344915540390 0.209506262035331 0.212823729128835 0.212814611851188 0.208599696507667 0.212389148306244 0.207739795553586 0.207449144373957 0.223861896791376 0.218937883709738 0.214810492502089 0.213631214503974 0.211158618663692 5 5|0 +|/ 6984446 6985183 6984853.5 6984381 6985207 + gene protein_coding_gene TRUE TRUE AT5G20640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05910.1); similar to Os03g0179700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049157.1); similar to Protein of unknown function DUF567 [Medicago truncatula] (GB:ABE88870.1); similar to Os04g0446000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052906.1); contains InterPro domain Protein of unknown function DUF567; (InterPro:IPR007612) -0.241289505245756 -2.33419384007164 0.0404342268616358 1 2.24436352179439 6.27237267482437 -0.241289505245756 0.107769860150626 AT5G58600_at 5.28663461836025 5.61395486437057 4.85755567619296 5.16984749765277 6.0070351375392 6.00502585468454 3.91188984606663 3.83408235935772 3.749390303933 3.46119388933001 5.23156352652476 5.1010982005463 4.65415997304211 4.86317902003708 5.53707577569085 4.30038426396361 4.84447544870686 4.69152929106854 3.48806244186979 0.233871129445080 0.239749692625652 0.236918926359889 0.234268103230845 0.239779632336870 0.235971455074226 0.239844742525196 0.251306218533159 0.236281530191227 0.251999106146162 0.235603761594135 0.239704480436234 0.232057716400185 0.236724313024496 0.236576488484057 0.236029450839546 0.233009632979310 0.240165428580915 0.253338871216881 5 5|0 -|/ 23701174 23701884 23701462 23701017 23702951 - gene protein_coding_gene TRUE TRUE AT5G58600.1|AT5G58600.2 PMR5 (POWDERY MILDEW RESISTANT 5) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30010.1); similar to unknown [Pisum sativum] (GB:ABA29158.1); similar to Os01g0652100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043736.1); similar to Os03g0290900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049797.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.217441806477643 2.33380977402155 0.0404612465739324 1 2.24378240123535 9.32032759802397 0.217441806477643 0.0794399639853834 AT5G54430_at 8.3675514504678 8.89453443036598 9.48973786970166 9.65282854821806 9.7951986610081 9.5108689311603 8.53834411742329 8.83024557695901 7.87217234862743 7.10483556318407 8.86847339051436 8.72521693069199 9.02734119369598 9.01576057689756 8.66217186086689 8.92819634855625 8.65186954239627 8.65429200725914 7.92165548801037 0.167835224142318 0.164223902908134 0.163562526342240 0.163572736300044 0.169724722352170 0.174684381379621 0.161730769901444 0.166784334763853 0.187765410564677 0.209348772025377 0.164847065447794 0.161730769901444 0.161730769901444 0.168267982738770 0.163293016346345 0.165964925004026 0.175173536254408 0.169499011558462 0.182476461940587 5 5 - 22116204 22116766 22116525.909 22114392 22116984 - gene protein_coding_gene TRUE TRUE AT5G54430.1 universal stress protein (USP) family protein similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT4G27320.1); similar to Os07g0551400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059943.1); similar to CHP-rich zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC65369.1); contains InterPro domain Universal stress protein (Usp); (InterPro:IPR006015); contains InterPro domain UspA; (InterPro:IPR006016) 0.251412541808117 2.33227724961317 0.0405692367114181 1 2.24146381627819 17.3596902138132 0.251412541808117 0.118685663608871 AT5G22030_at 5.83210876446614 5.89941638917586 6.75554121901001 6.70274086436134 7.16066846421839 6.4317628534282 6.99717327184784 6.50852325612758 5.97627764707544 5.14437919484924 6.45033294393844 6.41773506717994 6.73000215785174 6.59303867361277 6.40570301319502 6.57885668304552 6.786912866907 6.61864002168599 5.41090654963128 0.197292415452082 0.197292415452082 0.206094524563680 0.207565940715363 0.201892389161813 0.198939176722839 0.202583149274871 0.209731720769960 0.210369307239193 0.206547217261264 0.200115354657555 0.201786123379482 0.201594898842489 0.203080395873209 0.202277828358903 0.197943191857699 0.205293593317580 0.200721317363043 0.204551086451705 5 5|0 -|/ 7290189 7291104 7290733.2 7289706 7293597 - gene protein_coding_gene TRUE TRUE AT5G22030.1|AT5G22030.2 ubiquitin-specific protease 8, putative (UBP8) similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10570.1); similar to ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G10590.1); similar to Os12g0621000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067298.1); similar to PREDICTED: ubiquitin specific protease, proto-oncogene isoform 8 [Pan troglodytes] (GB:XP_001163445.1); similar to PREDICTED: ubiquitin specific protease, proto-oncogene isoform 4 [Pan troglodytes] (GB:XP_001163293.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) -0.286430084412593 -2.33121472471529 0.0406442720455527 1 2.23985652694489 12.5775787898023 -0.286430084412593 0.152582839886180 AT5G65120_at 2.88193253333201 3.22436840558104 3.41844661238377 3.47995591299318 3.51614842728344 3.48109329031348 2.78295794181755 2.95913169151911 2.44226598872654 2.7143538501199 3.22481063310252 3.57567462848004 3.45311542659046 3.53166236653901 3.58292984787811 3.38663532759532 3.19619431963687 3.27377667120509 2.54113424255499 0.193999422592457 0.196068275216727 0.191087178623921 0.187483079923074 0.196541268623472 0.187483079923074 0.191272288946804 0.194125115852961 0.192370649156389 0.191619713280166 0.187483079923074 0.198060262905671 0.187483079923074 0.189785758364129 0.190143968921872 0.189312636764004 0.191195742679138 0.195656472096671 0.187483079923074 5 5|0 +|/ 26030982 26031515 26031211.444 26030059 26031866 + gene protein_coding_gene TRUE TRUE AT5G65120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10110.1); similar to 52O08_25 [Brassica rapa subsp. pekinensis] (GB:AAZ67571.1) 0.208537351378474 2.32705371110771 0.0409394191115711 1 2.23356390893626 6.20251331678407 0.208537351378474 0.0677596355737862 AT5G18370_at 3.45768094839218 3.07325383219785 4.08053709663201 4.04907315732342 4.21497987380713 3.46287409526305 3.15194711713807 2.32169311511488 1.91856172665046 2.24136133080386 2.33463276629157 2.51070271217005 2.82000697253212 2.89530277916014 1.93537420678727 3.08162194852999 3.37562790859101 2.30206935017316 2.12867352838090 0.224878370151363 0.221612408825523 0.229421393513793 0.235533752918678 0.227742345100694 0.236180303590785 0.219903253086742 0.219567118097023 0.224815032687423 0.227990337102646 0.220209781875231 0.225014385036105 0.237035526300775 0.219567118097023 0.223038669110120 0.219567118097023 0.219567118097023 0.222169304573276 0.236548223476516 5 5 - 6085042 6085533 6085259.455 6085038 6088928 - gene protein_coding_gene TRUE TRUE AT5G18370.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18350.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984) 0.346547503654864 2.32651790795722 0.0409775750627877 1 2.23275383121988 5.85306300072082 0.346547503654864 0.205035746801256 AT5G58450_at 6.76574943196036 7.07378988049426 7.59656364769884 7.87857438521444 7.85171314844667 7.48276412198022 6.68526327506516 6.57026333763243 5.93147899858889 6.13017456751417 6.41766007036967 7.25571322505921 6.72875269025568 6.79655501048759 7.13912741241837 6.91847450769808 6.61863430586869 6.60580300351068 6.31020854849592 0.232920862773511 0.235048417627929 0.232920862773511 0.238086167074368 0.239165313751625 0.237101843800313 0.242163491629715 0.239731616331629 0.239316666658564 0.237787777701508 0.232920862773511 0.233031505863733 0.232920862773511 0.232920862773511 0.240609998459701 0.232920862773511 0.251809529797642 0.233539561978354 0.235204364343051 5 5 + 23648698 23649266 23648983.091 23644052 23649449 + gene protein_coding_gene TRUE TRUE AT5G58450.1 binding similar to Unknown (protein for IMAGE:3404939) [Xenopus laevis] (GB:AAI08817.1); similar to Os05g0345400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055256.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.23173144368875 -2.32189912044316 0.0413079227982193 1 2.22577268104229 13.7051071867656 -0.23173144368875 0.0984690683916891 AT5G28640_at 2.10087996509150 1.7671077188997 1.40503219274615 1.84872871323301 1.47606906355204 1.65233834270623 1.72039819242957 1.59045681855940 1.7085008060211 2.13342151906624 1.95288247510051 1.69034141772460 2.24075172414778 1.88967525874101 1.74876858598773 1.94785459153143 1.71849044442103 2.20054620230836 1.89975026289664 0.165998887222168 0.168257792011087 0.165873628094014 0.165940763819680 0.165311021928164 0.165709979028577 0.165496337200534 0.167354559893709 0.175419898477623 0.174048991883988 0.164847209255670 0.164642943822810 0.164473456557063 0.164344656589185 0.164344656589185 0.165581345436394 0.167964508334077 0.169565019106629 0.164344656589185 5 5 - 10647937 10649556 10648263.273 10647574 10649896 - gene protein_coding_gene TRUE TRUE AT5G28640.1 AN3 (ANGUSITFOLIA3) Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. similar to GIF3 (GRF1-INTERACTING FACTOR 3) [Arabidopsis thaliana] (TAIR:AT4G00850.1); similar to Os12g0496900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066805.1); similar to Calcium-responsive transcription coactivator (ISS) [Ostreococcus tauri] (GB:CAL54353.1); similar to Os03g0733600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051174.1); contains InterPro domain SSXT; (InterPro:IPR007726) -0.235615736574355 -2.31843811702984 0.041557151944609 1 2.22054381017220 3.61390372598051 -0.235615736574355 0.103287126867897 AT5G22790_at 2.47827181912238 3.01754898344139 3.26251563891160 3.30502954966728 3.37881681577808 3.55662919187925 3.20845162288901 2.65358681541235 2.66012201747082 2.91221783098869 3.38944802644704 4.12082284278387 3.59807308772549 3.33162117353513 3.59386549733005 3.42387585462368 3.67961748260452 4.15372645310621 2.53494704834767 0.228832825381031 0.219812752036998 0.224130116741962 0.226159663920650 0.219812752036998 0.227190681983442 0.226188018845262 0.219812752036998 0.227524497534955 0.233850453920000 0.223263663074722 0.219812752036998 0.223336705236247 0.224267118175873 0.221614213408185 0.219812752036998 0.243329162262083 0.221316138724962 0.219812752036998 5 5 - 7599402 7600606 7599988.364 7599149 7601693 - gene protein_coding_gene TRUE TRUE AT5G22790.1 similar to LCD1 (LOWER CELL DENSITY 1) [Arabidopsis thaliana] (TAIR:AT2G37860.3); similar to Os04g0524400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053349.1); similar to OSIGBa0153E02-OSIGBa0093I20.13 [Oryza sativa (indica cultivar-group)] (GB:CAH67884.1); similar to unknown [Euphorbia esula] (GB:AAF31706.1) 0.268533266303829 2.31532299897684 0.0417827182027403 1 2.21583921824228 6.28951143857362 0.268533266303829 0.137588741389055 AT5G09650_at 9.30093684445175 9.49199604152943 9.67178907029112 9.71341337703759 9.83164324500915 9.58435157363864 10.2018488830044 10.1678772854005 9.7165653268544 9.7851471711096 11.0101329287825 11.1287217329464 10.2871782446231 10.6638184532058 10.9718842850652 10.7371761258714 10.0389731764549 10.7645645884759 9.5110754422868 0.142335352011578 0.141445677422590 0.143035368609359 0.136690249112426 0.134446505103926 0.144301219169022 0.150299176246704 0.135485271609079 0.136429296917618 0.142400959649987 0.136210522524567 0.141062894819813 0.133804050774513 0.141791882921628 0.132473630613830 0.135746252684952 0.142988811810891 0.138135490440105 0.143217284213033 5 5|0 -|/ 2991335 2992267 2991758.4 2991150 2993214 - gene protein_coding_gene TRUE TRUE AT5G09650.1 inorganic pyrophosphatase family protein Identical to Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) (Chloroplast inorganic pyrophosphatase 1) (PPA1) [Arabidopsis Thaliana] (GB:Q9LXC9;GB:Q8LBD6); similar to inorganic pyrophosphatase, putative (soluble) / pyrophosphate phospho-hydrolase, putative / PPase, putative [Arabidopsis thaliana] (TAIR:AT4G01480.1); similar to Inorganic pyrophosphatase [Medicago truncatula] (GB:ABE86848.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) -0.199574506529818 -2.31480274205994 0.0418205054227862 1 2.21505366201348 19.9310997927179 -0.199574506529818 0.0548731861540657 AT5G39230_at 1.49133459865150 1.50270561823748 1.59107257639903 1.84508250522604 1.86865711422453 1.34945726241000 1.75652064945738 1.69690441854341 1.95446293815197 1.77554279603494 1.57032180182899 1.66836545111538 1.52989880518834 1.26127001303373 1.55323202360009 1.52467788505792 1.32689165545113 1.26247761052527 1.50443044406431 0.154392267303841 0.154385861897211 0.153764833084446 0.159748665487216 0.154706083165672 0.156076686045786 0.156435526089711 0.155577743572342 0.163823466547699 0.161423158516347 0.155290251072974 0.157769317861007 0.153500942941217 0.155546050658804 0.153627021371346 0.158041275449308 0.168398684810223 0.154844073592281 0.155752211209206 5 5 + 15726704 15727122 15726875.636 15726702 15727153 + gene protein_coding_gene TRUE TRUE AT5G39230.1 transcription initiation factor-related similar to transcription factor IIB (TFIIB) family protein [Arabidopsis thaliana] (TAIR:AT3G29380.1); contains InterPro domain Transcription factor TFIIB related; (InterPro:IPR000812); contains InterPro domain Zinc finger, TFIIB-type; (InterPro:IPR013137) -0.232783160466410 -2.31409048690892 0.0418722914759564 1 2.2139782742929 3.24119382546476 -0.232783160466410 0.100576316369221 AT5G02480_at 9.88610689543618 9.81972190638075 10.1916859967387 10.3828737873842 10.5768417433323 10.3983525117466 9.88344510990665 9.75150128726205 9.1138781492109 9.46910973424052 10.2840427964438 10.8538849346491 11.0140361590534 10.5979101497572 10.4235698672692 10.8952736646972 10.6731401085117 10.6786087677336 9.98216872946108 0.0712314757380347 0.0700669453117788 0.076062134241708 0.0712204185341414 0.0695970930241617 0.0757568458085311 0.072100832673556 0.0709022582059756 0.083016096816046 0.074546265951603 0.0707069460384745 0.0701378640719434 0.069758035740735 0.0690779524311671 0.0696943975140045 0.0693431622028461 0.0725534543873794 0.0687089186132822 0.0719688610753992 5 5 + 549094 549643 549330 547561 549910 + gene protein_coding_gene TRUE TRUE AT5G02480.1 similar to SLT1 (SODIUM- AND LITHIUM-TOLERANT 1) [Arabidopsis thaliana] (TAIR:AT2G37570.1); similar to SLT1 protein [Nicotiana tabacum] (GB:AAG39002.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.197904415218814 2.31368047372423 0.0419021305160502 1 2.21335926095988 20.2109547432661 0.197904415218814 0.0519819213411038 AT5G49660_at 9.95977346135015 10.2231431154752 10.9174700123903 10.9550787494174 10.8786041199978 11.0679781399972 10.1006819465903 10.3623024761145 9.73895812123355 9.96903885636018 10.7655612192922 10.6427978363272 10.8827856826546 10.3979996304741 10.5341288757608 10.8598491755143 10.9908941238170 10.6980072989931 9.80110927808448 0.0858823351241743 0.083641205106433 0.083641205106433 0.084606327835678 0.0864637465703867 0.0879598464141426 0.0918936881201467 0.0847351856223544 0.0914591599024684 0.0862797394080086 0.083641205106433 0.083641205106433 0.0841155323988929 0.0863180226382082 0.083641205106433 0.083641205106433 0.0894285753226637 0.0841457266483936 0.0861286052661551 5 5|0 -|/ 20178636 20179425 20178902.3 20178432 20181955 - gene protein_coding_gene TRUE TRUE AT5G49660.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G09970.1); similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99940.1); similar to clavata-like receptor [Picea glauca] (GB:ABF73316.1); similar to Os12g0632900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067348.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.210443416504606 2.31308974111092 0.0419451577476993 1 2.21246745830366 20.8370648687901 0.210443416504606 0.0724117071285715 AT5G09950_at 1.54342205079155 1.44354528838214 1.54331191291696 1.53130905300821 1.31570053136328 1.41481283787077 1.27153589330179 1.31064142622653 1.41198740078384 1.36422891259102 0.945576023481881 1.16430616211047 1.05309413391566 1.07657584205418 1.29273257588367 1.22482291529670 1.29552025684418 1.33784070109460 1.49633871474249 0.196903775645417 0.192760454279857 0.192228414089083 0.189140625540388 0.187878456024983 0.193437340131196 0.192370498283622 0.194793233160299 0.201850646910488 0.187878456024983 0.196132468267073 0.191404723555853 0.203004985088175 0.192443887889911 0.192536432716450 0.194414459363583 0.190290907078709 0.195893573941961 0.192409127312265 5 5 - 3102887 3103237 3103068.727 3102878 3105865 - gene protein_coding_gene TRUE TRUE AT5G09950.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G13650.1); similar to putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89038.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.187027565768360 -2.3130230153941 0.0419500205402787 1 2.21236672918355 2.72078166708646 -0.187027565768360 0.0253582239137129 AT5G56200_at 2.20509584723919 2.32252823083721 2.66049045597088 2.69709707846301 2.42336002069261 2.70838708084586 1.80518926185896 1.78387818371164 1.86181597196501 2.09947136589291 2.1250919845534 2.51385119239376 1.98340832226236 2.18536837216991 2.17453020536764 2.22739948503003 2.39220939074422 2.04380790935670 1.98691445600250 0.22837588414864 0.222072415444902 0.230607598780309 0.232964665802750 0.233566843921971 0.225436212509723 0.223219793172094 0.235839752542379 0.225886109984207 0.224465749009124 0.233812541041623 0.223205742868572 0.230291270350735 0.230305342045148 0.224540403086088 0.224738933420863 0.221226355909238 0.222965998626712 0.227651677343200 5 5 + 22765924 22766431 22766162.545 22764994 22766475 + gene protein_coding_gene TRUE TRUE AT5G56200.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G26940.1); similar to tapetum-specific zinc finger protein 1 [Petunia x hybrida] (GB:BAA19113.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.1988039368083 2.31242264146270 0.0419937987408224 1 2.21146043884851 4.4199744144632 0.1988039368083 0.0538489269104148 AT5G42980_at 13.0435294035502 13.2828901643347 13.9272619178030 13.8875127054129 13.7199514773840 13.6658048347121 13.3630641391815 13.5154704403418 13.1454532657681 13.5765068468108 14.2057013950835 13.9117750803497 14.1347807228300 13.9013379615138 13.7081914850451 14.0547988220565 14.109024911073 13.9518655848666 13.2177809033271 0.0678710853658147 0.068366006363581 0.0705600738427855 0.06744118187621 0.0681271157591183 0.0693346919040289 0.0671156993933814 0.0698170687664964 0.0740453046894003 0.069295326335932 0.0672688123718382 0.0671156993933814 0.069378091637097 0.0733401807912383 0.0696055444789555 0.0671156993933814 0.0688906185527587 0.0701944634353106 0.0694642853586549 5 5 + 17260010 17260918 17260577.182 17259835 17261140 + gene protein_coding_gene TRUE TRUE AT5G42980.1 ATTRX3 (thioredoxin H-type 3); thiol-disulfide exchange intermediate encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. Identical to Thioredoxin H-type 3 (TRX-H-3) (TRX3) [Arabidopsis Thaliana] (GB:Q42403); similar to ATTRX5 (thioredoxin H-type 5), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G45145.1); similar to thioredoxin h (GB:AAC49356.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Thioredoxin; (InterPro:IPR005746) 0.196819422712698 2.31029917115867 0.0421489934291157 1 2.20825546014334 27.2059013856672 0.196819422712698 0.0504634975905164 AT5G45640_at 2.15020953471879 2.30833612474975 2.28142475662986 2.62435572831145 2.31506438066850 2.19464118747384 2.42241193829833 2.2058525733342 2.6757855092336 2.64882691220779 2.65627661359398 2.85940872425968 2.85665675987936 3.32117530056378 2.63849359308535 2.91287201654593 2.68113754657763 2.35855443592725 2.84008046408244 0.210598376767711 0.219762837837719 0.212187929317459 0.209672159845762 0.217525504590708 0.21495127672602 0.213162119439717 0.216204996358784 0.225465971811576 0.214115661438828 0.209651974039686 0.2179672569976 0.209830489621309 0.208755923453599 0.213619724659423 0.212432933612110 0.213213949072143 0.212641939307656 0.209525281568467 5 5|0 -|/ 18524722 18525409 18525103.1 18524716 18528843 - gene protein_coding_gene TRUE TRUE AT5G45640.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G45650.1); similar to subtilisin-like proteinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAB21149.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259) -0.214244726527052 -2.30963497276522 0.0421976504796145 1 2.20725313532128 5.06635511251245 -0.214244726527052 0.0781635204868494 AT5G13670_at 0.988666212912622 0.737346808255046 0.754192182208471 0.707653295143885 0.82045570748025 0.879107754685764 1.08949269796936 0.930315087103525 0.89216013127772 1.02913051109673 0.617117750710441 1.06744823959639 0.717265388749929 0.863449903059 0.770529537323705 1.39967358120260 1.34033958800434 1.01137282221933 1.36965231194216 0.211169338894329 0.204683328361298 0.211685956800865 0.20679440632985 0.206749030069286 0.204999000232946 0.204194967385476 0.213113913863135 0.216008478333476 0.209833727675999 0.214233262885116 0.215267593944662 0.205764703711724 0.209706449945701 0.210364267915061 0.203289511850456 0.203605454332877 0.216184977985501 0.203289511850456 5 5 - 4407218 4408103 4407556.636 4407080 4409014 - gene protein_coding_gene TRUE TRUE AT5G13670.1 nodulin MtN21 family protein similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G39510.1); similar to Peptidase M14, carboxypeptidase A [Medicago truncatula] (GB:ABE82104.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) -0.198036266667973 -2.30830721334719 0.0422950808477562 1 2.20524967329567 1.89859401128507 -0.198036266667973 0.0530871478998878 AT5G02170_at 1.73552303008541 1.40708324547173 1.60565898400434 1.55360838909509 1.20683687235998 1.50650377295808 1.66911527713945 1.24614326519735 2.20483951709471 2.47270318955655 2.71015223968138 2.22965081934252 1.49943380241241 2.92750396361059 2.32460718575185 1.755147014068 1.92034688664552 1.70751475987666 2.13314945949703 0.223360912297527 0.218409286713157 0.220919631896122 0.224341667495107 0.22010098259338 0.227436849352410 0.221835083515022 0.218409286713157 0.245400239442506 0.229886802808194 0.226040213479606 0.238640632089138 0.227636440200330 0.228430889706581 0.218409286713157 0.225933252583259 0.224309068538456 0.232526243011474 0.218409286713157 5 5|0 +|/ 429415 430423 429881.375 427831 430693 + gene protein_coding_gene TRUE TRUE AT5G02170.1 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G09330.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G02180.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G09340.1); similar to Os12g0574000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067099.1); similar to Os02g0101000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045585.1); similar to Amino acid/polyamine transporter II [Medicago truncatula] (GB:ABE87832.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -0.237446083379089 -2.30746447295296 0.0423570336115511 1 2.20397821505591 3.69357175752545 -0.237446083379089 0.106578006002852 AT5G18170_at 10.203734227602 10.0844657314408 9.69873605327089 9.7052368976063 10.6932647673871 10.1645832510847 8.30546626413005 8.38596177754657 9.7672332264311 9.0652109794311 9.45679811960457 10.0409061870670 9.48035633042755 9.68508188234587 9.63542976534266 9.8925315479343 8.99996421663085 9.57779101410044 9.54158228547747 0.095322596028114 0.0945842422713624 0.0979666802625646 0.0966424043444684 0.0951889449845559 0.101225636215044 0.0977453959729815 0.0998933321082884 0.102398882854841 0.112160524913602 0.0941579062686764 0.0941932136487141 0.0957440002669023 0.101925486937181 0.0975811393989165 0.0942622489591575 0.0960975851452327 0.104404831365255 0.099338615492971 5 5 + 6007416 6008217 6007871.182 6006041 6008474 + gene protein_coding_gene TRUE TRUE AT5G18170.1 GDH1 (GLUTAMATE DEHYDROGENASE 1); oxidoreductase encodes the beta-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. Identical to Glutamate dehydrogenase 1 (EC 1.4.1.3) (GDH 1) (GDH1) [Arabidopsis Thaliana] (GB:Q43314); similar to GDH2 (GLUTAMATE DEHYDROGENASE 2), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07440.1); similar to glutamate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G03910.1); similar to glutamate dehydrogenase [Nicotiana tabacum] (GB:CAD12373.1); similar to GDHB glutamate dehydrogenase [Vitis vinifera] (GB:ABF57084.1); similar to glutamate dehydrogenase 1 [Glycine max] (GB:CAI53673.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase; (InterPro:IPR006095); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, dimerisation region; (InterPro:IPR006097); contains InterPro domain Glu/Leu/Phe/Val dehydrogenase, C terminal; (InterPro:IPR006096) -0.227188556617161 -2.30742766604209 0.0423597414147983 1 2.20392268655209 19.1822392279477 -0.227188556617161 0.0948255724330566 AT5G48710_at 2.08176334001906 2.09319396202644 2.85063518682869 1.90326618188397 2.03846277825857 2.24773623829367 2.23936436986014 2.05697096160904 2.54499810809151 2.70035572311865 2.35601963656871 2.38931009395903 2.43376667316523 1.83513113138521 2.12259874673977 2.47195353388939 2.30002494478208 2.42618760318490 2.48501914463908 0.214052155093920 0.207146930553196 0.207313055578962 0.209110361136035 0.207682208498829 0.206888164474316 0.208163155479275 0.210806041744018 0.209304600274853 0.206888164474316 0.206888164474316 0.215215674502286 0.220619851303628 0.221579075962223 0.211468922743275 0.210962449676410 0.213853891979987 0.208287707799402 0.212876801725357 5 5|0 -|/ 19772303 19772729 19772522.125 19772291 19772798 - gene protein_coding_gene TRUE TRUE AT5G48710.1 ubiquitin-related similar to ubiquitin-related [Arabidopsis thaliana] (TAIR:AT5G48700.1); similar to Ubiquitin-like protein [Cicer arietinum] (GB:CAA05079.1); similar to ubiquitin-like protein SMT3 [Phaseolus vulgaris] (GB:AAM21576.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.303697705108877 -2.30696293910274 0.0423939447584657 1 2.20322159929625 4.62325664605197 -0.303697705108877 0.170851623093285 AT5G50900_at 6.72913868477225 7.83295192541215 7.61254694467772 7.89106657990565 8.31436341954045 8.15141981244204 7.66532511120652 7.94997157348397 7.84728274708495 7.5673006427159 8.86273802593685 8.6744213947709 8.5097505280752 8.93799731005116 8.3551563023042 8.50340451110448 7.96453931172095 8.4472535194933 8.05989529059708 0.176874687697133 0.160777742579823 0.160699527322147 0.166694404454366 0.164521928706759 0.160217506136238 0.163856310473221 0.161827515033828 0.168837137431446 0.162165203670317 0.161632605650461 0.160636406448071 0.159436386223094 0.160466595702188 0.160460892170153 0.157437731586733 0.171951229721021 0.165028343884622 0.160480418783337 5 5 - 20722278 20722784 20722489.182 20722030 20724004 - gene protein_coding_gene TRUE TRUE AT5G50900.1 armadillo/beta-catenin repeat family protein similar to binding [Arabidopsis thaliana] (TAIR:AT2G45720.2); similar to Armadillo [Medicago truncatula] (GB:ABE89397.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.343510532704115 -2.30625179341666 0.0424463359489592 1 2.20214883636551 15.9467149262958 -0.343510532704115 0.205020562215141 AT5G19000_at 8.82294470467591 8.761693780374 9.21003369069929 9.11151740719265 9.26631450838527 9.331095835119 8.2786017126171 8.34656322652611 8.69720525618912 8.27345466769479 9.21364320613094 9.1592149261584 8.99852322737564 9.20695242146575 8.86938800317847 9.3472140283282 8.92986839027376 8.85389561956353 8.62764723701069 0.123198047164462 0.139221926361328 0.135954010221735 0.123198047164462 0.148055092437387 0.123198047164462 0.133807187450599 0.141538563822448 0.138493908937043 0.148365273812395 0.123198047164462 0.127532926706925 0.134915081492848 0.134720139223759 0.127374645100723 0.123198047164462 0.131119011705491 0.126524537000329 0.140242664451235 5 5 + 6344149 6344611 6344377.429 6342269 6344796 + gene protein_coding_gene TRUE TRUE AT5G19000.1 ATBPM1 (BTB-POZ AND MATH DOMAIN 1); protein binding similar to ATBPM2, protein binding [Arabidopsis thaliana] (TAIR:AT3G06190.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAO37987.1); similar to Os07g0101400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058677.1); similar to Os07g0655300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060495.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) -0.186522543175843 -2.30517994210155 0.0425254192210754 1 2.20053211338979 17.6936488739191 -0.186522543175843 0.025826645506872 AT5G40820_at 2.26972487954315 2.44236911589442 2.22844782748139 2.83603370752665 2.47477598964351 2.29177326304727 2.31779714340293 3.12757511600752 2.46364597408394 2.35084184246665 2.34479386388775 2.40710798696708 2.43261880014904 2.45100114228408 2.01765342873485 2.26015067304801 2.23908253278139 2.50727809276527 2.26839135985842 0.195625601824371 0.201365750994727 0.201375240469103 0.195597856039613 0.196596498220904 0.195597856039613 0.197638412534392 0.202311864213901 0.201453532522747 0.203533523587994 0.200534530265631 0.200351019200332 0.199011798382806 0.208539665235951 0.196309610066586 0.205160025565208 0.196172086972125 0.205434563780829 0.199299738401088 5 5 - 16361091 16361808 16361438.273 16359973 16371126 - gene protein_coding_gene TRUE TRUE AT5G40820.1 ATR (ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED); inositol or phosphatidylinositol kinase Encodes a Arabidopsis ortholog of the ATR protein kinase involved in a wide range of responses to DNA damage. Identical to Serine/threonine-protein kinase ATR (EC 2.7.11.1) (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) (ATR) [Arabidopsis Thaliana] (GB:Q9FKS4;GB:Q9MAZ4); similar to TOR (TARGET OF RAPAMYCIN) [Arabidopsis thaliana] (TAIR:AT1G50030.1); similar to GlimmerM protein 276 [Beta vulgaris] (GB:ABD83299.1); similar to Serine/threonine-protein kinase ATR (GB:Q5Z987); similar to Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair (ISS) [Ostreococcus tauri] (GB:CAL54608.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403); contains InterPro domain PIK-related kinase, FATC; (InterPro:IPR003152); contains InterPro domain PIK-related kinase, FAT; (InterPro:IPR003151); contains InterPro domain UME; (InterPro:IPR012993) -0.314332135292351 -2.30386167376251 0.0426228790458199 1 2.19854397952396 4.84527240059178 -0.314332135292351 0.180524881880781 AT5G11020_at 3.30944529005061 4.05928452108559 3.95334100010939 4.18095442617859 4.86134502759666 3.79984924201775 4.21844834128077 3.69398475980718 3.62685151125112 3.84616780726694 4.04365601581468 4.34995817969818 4.15440430854639 3.99476218823917 4.19602793527637 4.2893471756607 4.0998702974733 4.53674973590814 4.1562980381397 0.240649675548643 0.240827219499804 0.253925076785296 0.247416530256652 0.24658278793511 0.250273292051729 0.237883328862653 0.242148087796162 0.23927390962831 0.244002195640691 0.235071404439627 0.235071404439627 0.238617181194945 0.247868340198138 0.247817443786276 0.238231020783939 0.251356016406853 0.243244002838775 0.241431075265084 5 5|0 -|/ 3486498 3487346 3486812.714 3486243 3489235 - gene protein_coding_gene TRUE TRUE AT5G11020.1 kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32000.1); similar to putative protein kinase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD25150.1); similar to Os05g0319700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055185.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.393111535365473 -2.30374309207314 0.0426316563937389 1 2.19836515637266 8.05184962524734 -0.393111535365473 0.245707281039464 AT5G27740_at 5.9914607799429 6.15103075137977 6.52049125250858 6.43706898901529 7.84025360633934 6.54194529834157 5.83449232356356 5.46290569765413 4.67720910777781 4.91934244548471 6.36667227396239 6.9760945847929 6.58926728093879 6.6590510019873 7.0465895521201 6.73544816576508 6.56567017693264 6.61435662592526 4.92809972857176 0.263332343947542 0.252133751580467 0.252133751580467 0.255916921497416 0.25749847935295 0.252133751580467 0.261452933626607 0.254678362927170 0.276692038320557 0.260476119804810 0.261855455986300 0.256098448868401 0.258709086241137 0.252133751580467 0.259010038481668 0.25332263435119 0.259799846253437 0.264509190629521 0.25322234534093 5 5|0 +|/ 9825258 9826849 9825832.444 9823683 9827068 + gene protein_coding_gene TRUE TRUE AT5G27740.1 nucleoside-triphosphatase/ nucleotide binding similar to EMB1968 (EMBRYO DEFECTIVE 1968), ATPase [Arabidopsis thaliana] (TAIR:AT1G21690.1); similar to Os03g0792600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051525.1); similar to replication factor C 38 kDa subunit [Oryza sativa (japonica cultivar-group)] (GB:BAC76086.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.380280892133204 2.30118720484436 0.0428212670708462 1 2.19451142728437 12.1153031548837 0.380280892133204 0.235767716115426 AT5G45060_at 6.13484285852629 6.22159937258078 6.81030851747102 6.90178537595364 7.63253319636366 7.03009555310844 6.09467456046789 6.0444324285174 6.0918854533235 6.06948940960633 6.63089838416132 7.02054804916745 6.47013160209459 6.7314048626126 6.25879083081288 6.8298964735956 7.10608137185936 6.3773941392762 5.92648577154208 0.176256912604819 0.176937286672692 0.177785688056988 0.175273848797738 0.203384291455228 0.181992455135324 0.181613370159846 0.174922098202325 0.175372146001569 0.177514919251433 0.178678090132334 0.174193799468924 0.180274575093022 0.185157042867047 0.17803688725401 0.173513685307849 0.187533887724264 0.18261121329385 0.172756464586117 5 5 + 18202695 18203225 18202867.818 18199265 18203722 + gene protein_coding_gene TRUE TRUE AT5G45060.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) -0.237012112073122 -2.30071180895818 0.0428566245432615 1 2.19379475726594 12.9624990290510 -0.237012112073122 0.106867398405707 AT5G63260_at 5.49337597169232 5.52760112058721 5.95635102222655 5.93510933567106 6.17571725405721 6.71969863944387 4.22692755888297 4.26378243118158 5.0798981624818 4.44611259398717 5.91311196094576 5.64915665739281 5.49359807124246 5.82243594086434 5.90613853415481 5.52683003368916 5.39896097799907 5.67507119311537 4.28734848059426 0.185576028373095 0.188275752024777 0.187681843471744 0.190945370002498 0.185576028373095 0.19081210270763 0.187792327627052 0.188828182055392 0.189903615906361 0.190042797877644 0.187371979124969 0.185576028373095 0.189167312281543 0.185576028373095 0.196571201167094 0.185576028373095 0.198774727235129 0.185576028373095 0.190662722196348 5 5|0 +|/ 25380889 25381629 25381272 25378976 25381940 + gene protein_coding_gene TRUE TRUE AT5G63260.1 zinc finger (CCCH-type) family protein Identical to Zinc finger CCCH domain-containing protein ZFN-like 5 [Arabidopsis Thaliana] (GB:Q5RJC5;GB:Q9FMJ7); similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT3G48440.1); similar to Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97111.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) 0.226347395342775 2.30070461931089 0.042857159488418 1 2.19378391901184 10.6761284168161 0.226347395342775 0.0946114710196576 AT5G61890_at 2.08629021482065 2.09122819569108 2.03614631514915 2.25332476134242 1.98568727331607 2.35359169756665 2.20347690820003 2.05285895884294 2.28201174412023 2.72189509135444 2.39744971883185 2.30553513499344 2.05455794256944 2.45799089392198 2.31203532410201 2.59055929187734 2.33911624724182 2.36785573594115 2.17044001767504 0.186768994495665 0.185835938398537 0.186218903497607 0.184719537263554 0.189187044044439 0.186058680858609 0.186290264786477 0.196505728671916 0.184737210993185 0.201214275858574 0.195080316664053 0.194110250307836 0.188294298989205 0.184553071027447 0.195056742670632 0.184426665960873 0.195962529564842 0.183480971047711 0.183968479290069 5 5 - 24869865 24870772 24870182 24869865 24871136 - gene protein_coding_gene TRUE TRUE AT5G61890.1 AP2 domain-containing transcription factor family protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G07310.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80204.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.213507348881568 -2.29983322226004 0.0429220435470248 1 2.19247037137218 4.50511878423351 -0.213507348881568 0.0783978298051661 AT5G43120_at 1.65692613442250 1.64359272092057 1.96004487214450 2.09007010766260 1.71427821017933 1.98883114137613 1.59643397347908 2.00477726921985 2.10287843635426 2.26593369179891 1.76049093183989 1.80406946353723 1.78809162140502 1.55593917520824 2.10808532699948 1.53446146917322 2.03021397615643 1.90314584223589 2.09793000188464 0.198187503440121 0.197624745078745 0.192373064378793 0.198320421777641 0.19431528863483 0.201014056671508 0.192269404728137 0.192448281387289 0.192982850348319 0.193677443068698 0.197910551993696 0.194395631017109 0.20474201072709 0.208037267740507 0.201567169859537 0.195475008618386 0.200473888401716 0.200996275165216 0.193577771594483 5 5 + 17331113 17331470 17331293.636 17329830 17331596 + gene protein_coding_gene TRUE TRUE AT5G43120.1 tetratricopeptide repeat (TPR)-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT5G10200.1); similar to Os05g0421300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055582.1); similar to 80A08_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67602.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.220811653845007 -2.2984217172138 0.0430273454821419 1 2.19034294314018 3.81494077159158 -0.220811653845007 0.0881063937422263 AT5G45970_at 1.38822690283973 1.35811907866662 2.20268937253773 2.3478258163955 1.73711058196086 1.81866424027322 1.72466932707953 1.91100017201427 1.99251616376058 2.08548851763508 2.05435681163315 2.30040959706520 1.88035371584800 2.37880317213657 2.33365388763099 2.38884187667068 2.75415434571883 2.30999605754693 1.96388869046642 0.193057513597769 0.188152029231313 0.185730550300946 0.186438059268362 0.189573381911614 0.183589878987686 0.189567209675704 0.189927301408589 0.193711920948294 0.183905629602519 0.183589878987686 0.190085521543339 0.185175206742374 0.195291346271393 0.187723715028897 0.186839933261108 0.187644224561336 0.183589878987686 0.189297347436212 5 5|0 +|/ 18661063 18662899 18661821.6 18660961 18663193 + gene protein_coding_gene TRUE TRUE AT5G45970.1 ARAC2 (RHO-RELATED PROTEIN FROM PLANTS 7); GTP binding Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family. Identical to Rac-like GTP-binding protein ARAC2 (GTPase protein ROP7) (ARAC2) [Arabidopsis Thaliana] (GB:Q38903); similar to ARAC11/AtROP1/ROP1/ROP1AT (rho-related protein from plants 1), GTP binding / GTPase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G51300.1); similar to Rac-like GTP-binding protein RAC9 (GB:Q41254); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.192431691485819 2.29800972556074 0.043058128179403 1 2.18972205255207 3.96805600663026 0.192431691485819 0.0435538576661282 AT5G38500_at 0.80494638448362 0.850788024873529 1.21602396653018 1.10205243560614 0.936917007832872 1.19889936308061 0.986144941286429 1.38503535181930 0.905633244931011 0.885327622007726 1.53568626263468 1.35302753000397 1.10852038573435 1.32508325400007 1.26399701512922 0.930542366078531 0.974522454689088 1.06247574922213 0.401425804708629 0.17654969391973 0.180495921899822 0.180592408918998 0.179037016163560 0.181706062854853 0.182611381640467 0.183564288109828 0.184775466557953 0.182966686890748 0.186827672911060 0.179835748035821 0.177265392004250 0.179427790000208 0.190304691254392 0.182399293275312 0.177467652182579 0.18610695337582 0.193209235406047 0.183734191797269 5 5 - 15433249 15433818 15433618.545 15433248 15434483 - gene protein_coding_gene TRUE TRUE AT5G38500.1 DNA binding similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G38490.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Protein of unknown function DUF313; (InterPro:IPR005508) 0.218526346081540 2.29781948410709 0.0430723495946616 1 2.18943535983551 2.02261465164023 0.218526346081540 0.0852791329621038 AT5G40140_at 2.82379435507368 2.92221911503805 3.33667644313385 3.19249132277579 2.70964721950293 2.83392584521339 2.75978429007289 2.96107689726413 2.88887094021499 2.92266651440589 2.84729256326252 3.26353646980519 3.4602871749985 3.43843451980254 2.85424511655413 3.35558032358041 3.26967525990877 2.72090978990528 2.72858615001541 0.18554117089593 0.185909680640854 0.188570277861708 0.185840838733407 0.194710359832271 0.189245200667093 0.188062490549104 0.188979793070976 0.184712854070073 0.191101973516095 0.191029066974661 0.191305737490437 0.196366128741726 0.184120731779275 0.186088053020928 0.189499052342286 0.194267564168590 0.185041291350395 0.185455308439839 5 5 + 16075635 16076198 16075895.273 16074575 16076227 + gene protein_coding_gene TRUE TRUE AT5G40140.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G65200.1); similar to Os09g0386200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063073.1); similar to arm repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37863.1); similar to Os06g0238000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057254.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) -0.195938373126136 -2.29743640635278 0.0431010001781528 1 2.18885808317470 5.94142844622897 -0.195938373126136 0.0508794464039743 AT5G07080_at 1.80671086173086 1.71880275612395 1.87801950923826 1.30467699462511 1.72179549795926 1.87255730134282 1.91993377467077 2.01013706958987 2.61013875034742 2.27437507334369 2.56525993842075 2.77723665430038 2.30926098085091 2.27164978635836 2.96519576337781 2.20359895329181 2.07354507772121 2.81328109268961 2.36728060931075 0.199331514675583 0.196054813921701 0.203600266296921 0.215613274192757 0.19851080299943 0.202380156075131 0.196054813921701 0.20548029908156 0.200734529780322 0.198016310030993 0.196054813921701 0.198751086728194 0.199224771100325 0.196054813921701 0.19632247338066 0.202642323432713 0.20265212375286 0.201319071012053 0.200936803711110 5 5 + 2201427 2201912 2201605.091 2200333 2202111 + gene protein_coding_gene TRUE TRUE AT5G07080.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G47170.1); similar to Transferase [Medicago truncatula] (GB:ABE89145.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.234878547395033 -2.29726385131227 0.0431139116752583 1 2.18859806080183 4.2364008915986 -0.234878547395033 0.104882438446510 AT5G08050_at 10.4192885019317 10.3016371967301 10.4156331937990 10.4674606993057 10.5954712632921 10.383417861242 11.4623370798009 11.2646250901671 11.0494610778836 10.8773335186082 12.2580690700036 12.4749010035055 11.7274780447974 11.9739140710166 12.4582186578493 11.8645614923936 11.5976549370541 11.7437025978899 10.6546600966085 0.0858915043033112 0.0834413984667302 0.0832976161956361 0.0842063461533661 0.0829597614038087 0.0849494772230555 0.081490630545687 0.083724573221283 0.0968091206450957 0.0871856733589614 0.081490630545687 0.081490630545687 0.0815652521741803 0.0834916654616492 0.0843382900759744 0.081490630545687 0.0823776486292879 0.0922384830157092 0.0863494584821023 5 5 + 2578421 2578927 2578694 2578346 2579164 + gene protein_coding_gene TRUE TRUE AT5G08050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74730.1); similar to Os12g0575000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067105.1); similar to hypothetical protein LOC_Os11g27300 [Oryza sativa (japonica cultivar-group)] (GB:ABA93451.1); contains InterPro domain Protein of unknown function DUF1118; (InterPro:IPR009500) -0.198064530372224 -2.29721699872181 0.0431174180835741 1 2.18852745975434 22.1001325517905 -0.198064530372224 0.0548844158410405 AT5G22410_at 1.72633180486202 1.78772168887998 1.56913980010497 1.74858181468430 1.18925185478916 1.92916339029372 1.28780086338385 1.70870377373305 1.83597367476596 1.66413907519299 1.36489853907707 1.24440317064292 1.81475123363167 1.33420774129192 2.12389204597062 1.73851091288829 1.69314977587401 1.96483695641754 2.33751931954460 0.203618570786214 0.197834286135549 0.199330656582976 0.198651181548853 0.198774828704109 0.201096285099405 0.198936895655047 0.197834286135549 0.204037632522925 0.198804091933324 0.200734862001053 0.202466666841154 0.198354684693055 0.204494631620836 0.204708436175166 0.198945043727205 0.197834286135549 0.207426017370737 0.197834286135549 5 5|0 +|/ 7426991 7427516 7427250.7 7426317 7427967 + gene protein_coding_gene TRUE TRUE AT5G22410.1 peroxidase, putative Identical to Peroxidase 60 precursor (EC 1.11.1.7) (Atperox P60) (ATP14a) (PER60) [Arabidopsis Thaliana] (GB:Q9FMR0;GB:Q96507); similar to peroxidase 57 (PER57) (P57) (PRXR10) [Arabidopsis thaliana] (TAIR:AT5G17820.1); similar to peroxidase [Spinacia oleracea] (GB:CAA71489.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.280247058982571 -2.29540126319616 0.043253518702984 1 2.18579166751644 3.4211912005791 -0.280247058982571 0.150924750926764 AT5G61340_at 5.41773308348763 6.45471962208806 7.44970068795333 7.38393210158893 8.60630898159878 8.43236360878737 7.75152329974138 7.81980413142874 5.4157568364899 6.89054535166647 7.68549777050297 7.76874592140407 7.82417823995937 7.68297177946893 7.36186073169819 8.01398997471566 7.85008682885352 7.25024356534607 6.03210984832696 0.24055248513659 0.211902552424587 0.233579692631356 0.210263111851567 0.206720685014841 0.223648337279186 0.205852870393019 0.205852870393019 0.264631376866600 0.215184572518555 0.208613246663619 0.217115585928323 0.208057283686339 0.221473211110995 0.210790059903455 0.215227837150583 0.223983746547248 0.234281293847405 0.207146552771297 5 5 - 24679426 24679789 24679626.909 24679230 24680343 - gene protein_coding_gene TRUE TRUE AT5G61340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26650.1); similar to Os12g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067114.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55692.1); similar to Os12g0507400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066845.1) 0.315467042945505 2.29384558254782 0.0433704567343342 1 2.18344816369093 14.3107611214116 0.315467042945505 0.182700641050257 AT5G17560_at 9.4554785373395 9.64914281371967 9.85247363516763 10.0157164724593 10.2383253005627 9.7427599853602 10.3326459283213 10.2233593609679 9.6516591468092 9.51517136517615 10.3022575528925 10.5104042562098 10.2285507907312 10.4556793536209 10.3309439870547 10.4062870879699 10.3010045496594 10.1953711414052 9.33540374131898 0.138814285827792 0.129857140384753 0.141893477636882 0.133826485870961 0.138534419785478 0.137962281091606 0.139108155596109 0.134811176988187 0.140895495858897 0.139386048003658 0.136312614234027 0.133105896987045 0.132699936990259 0.139041500041801 0.138832620218144 0.135939334365796 0.133757455340052 0.139269173331697 0.140795288017079 5 5|0 +|/ 5788488 5789539 5788711.6 5788456 5789925 + gene protein_coding_gene TRUE TRUE AT5G17560.1 BolA-like family protein similar to BolA-like family protein [Arabidopsis thaliana] (TAIR:AT1G55805.1); similar to BolA-like [Oryza sativa (japonica cultivar-group)] (GB:BAD37765.1); contains InterPro domain BolA-like protein; (InterPro:IPR002634) -0.228613056060702 -2.29337233379792 0.0434060906449192 1 2.18273533820661 19.8597662997595 -0.228613056060702 0.098151536088762 AT5G44660_at 3.75149547319412 3.60974732866961 4.56164401583333 4.01273202709613 4.60794870471835 4.20107309879275 3.92096177830033 3.25533403623393 3.64610677073241 4.28270110174946 4.50453544036397 4.77021112611797 4.32338360530009 4.55440097918975 4.23697490683931 5.03343262044721 4.71289732914247 4.12330534821996 4.87148388213397 0.207197931477798 0.201591856937527 0.205089218571190 0.199839852628396 0.203618766070148 0.208904368455889 0.203398864085198 0.203297526342619 0.202464729155740 0.212176530893028 0.204053282706576 0.203013961183714 0.205617826572290 0.218771040447946 0.205776262119621 0.204702866373383 0.219429254165952 0.202051551460741 0.205949634805902 5 5 + 18033758 18034240 18033946.273 18033037 18034404 + gene protein_coding_gene TRUE TRUE AT5G44660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20190.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61849.1) -0.297367729722783 -2.29259835098075 0.0434644297067343 1 2.18156962059643 8.38969535168375 -0.297367729722783 0.166888318850161 AT5G40610_at 3.82774337901313 3.48820560666518 3.50781992522663 3.26811763585324 4.7555108168738 4.06182521393827 3.77799562246476 3.32974285780843 4.05017211803765 3.98181290824674 5.92901767045662 7.4705223204887 5.55269596010375 6.10859603656197 6.67049355577258 6.03495228614472 4.21752611281884 5.79969311227349 4.0855751561842 0.222210344443081 0.225543988323674 0.224147528120488 0.223665369482145 0.218894894287674 0.226352097552365 0.220557849513044 0.225552722285235 0.234674265113137 0.231376454848441 0.218894894287674 0.222058838065622 0.221472815589344 0.230468027731301 0.219131893973439 0.221967735149607 0.227739318477796 0.219148921649233 0.222133873975500 5 5|0 -|/ 16282306 16283306 16282716.9 16282090 16284582 - gene protein_coding_gene TRUE TRUE AT5G40610.1 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH similar to GLY1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1), glycerol-3-phosphate dehydrogenase (NAD+) [Arabidopsis thaliana] (TAIR:AT2G40690.1); similar to Glycerol-3-phosphate dehydrogenase [NAD+] (GB:P52425); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase; (InterPro:IPR006168); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; (InterPro:IPR011128); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; (InterPro:IPR006109) 0.289490858515359 2.29052457488794 0.0436211144883279 1 2.17844676900623 8.75818206188899 0.289490858515359 0.160005236290660 AT5G38350_at 1.14498040219985 0.837812427984226 1.54179062337265 1.24130194609347 0.638110499945817 1.17827817724075 0.476274832950754 0.532861251979625 0.475626114426164 0.600469460211925 0.391391580308141 0.882082340471508 0.558975833694305 0.662643392811806 1.07063140386389 0.837151910782429 1.25288787106525 1.06728566898283 0.815469504410801 0.232566274593561 0.228687329600308 0.230313247606892 0.230953146768885 0.228687329600308 0.235905656200839 0.237352109656682 0.228687329600308 0.250543149988572 0.24095113096111 0.230877663654598 0.229306020660832 0.231421251320429 0.233877792652807 0.228687329600308 0.231809894445283 0.229703869577511 0.228838189756418 0.23168404950346 5 5 + 15348163 15348682 15348460.091 15345889 15348758 + gene protein_coding_gene TRUE TRUE AT5G38350.1 disease resistance protein (NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G38340.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G65850.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G25510.1); similar to Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28507.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.247773312929324 2.28820801761545 0.0437967878116274 1 2.17495922045665 1.6843777418528 0.247773312929324 0.119849413410821 AT5G04900_at 7.59256914978736 7.55611117101202 8.5474603671329 8.72530334908372 8.85616688959617 8.7252042762999 7.87425166118636 8.15439406481764 7.0808816249552 7.38175827342488 8.59020709125562 8.52503481764026 8.6613908020615 8.66014548236519 8.49654590026546 8.9207691312232 8.78917116749184 8.26547437423393 7.53361000485492 0.1575343246766 0.159404927704884 0.165553481846573 0.158982267449112 0.157712331201730 0.169229722058699 0.159693382709498 0.154599643507090 0.184198832323315 0.170883314206146 0.162300198026383 0.164126789466811 0.162549920753967 0.165616907073970 0.163639519869009 0.15816695901261 0.163676379876305 0.157459782114521 0.158118987576951 5 5|0 +|/ 1435827 1436983 1436397.571 1434775 1437331 + gene protein_coding_gene TRUE TRUE AT5G04900.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT4G13250.1); similar to putative oxidoreductase protein [Oryza sativa (japonica cultivar-group)] (GB:AAO73232.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.201449029695924 2.28818624831868 0.0437984418961668 1 2.17492645157317 16.2267704395622 0.201449029695924 0.0620560325736293 AT5G47650_at 6.50643424147293 6.75191515376677 8.41494780877205 8.6093474345149 8.6499275771393 8.46114618952495 8.21945845668382 8.44708935936365 8.12993517997713 7.80162532961038 9.27060012651155 8.85133615929844 8.87553976024585 8.80595525643185 8.91587705502353 8.9427150061399 8.97821664537532 9.082845482361 7.55747923884135 0.153484418627624 0.143698138445441 0.160498177203288 0.146204739659019 0.146158111802182 0.148454360225462 0.150968875152752 0.141308862493116 0.153980703345218 0.156472669002293 0.142744769377717 0.141149674860616 0.150902687105801 0.146782381326860 0.145215121294408 0.141149674860616 0.151421307873222 0.145438068119532 0.160909349189386 5 5|0 -|/ 19327625 19328595 19328143.1 19327418 19329664 - gene protein_coding_gene TRUE TRUE AT5G47650.1 ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2); ADP-ribose diphosphatase/ NAD binding / hydrolase Identical to Nudix hydrolase 2 (EC 3.6.1.-) (AtNUDT2) (ADP-ribose pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase) (EC 3.6.1.22) (NUDT2) [Arabidopsis Thaliana] (GB:Q94B74;GB:Q9FGJ2); similar to ATNUDT10 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 10), catalytic [Arabidopsis thaliana] (TAIR:AT4G25434.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64992.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG; (InterPro:IPR003293) 0.209597155604408 2.28754344365947 0.0438473109700846 1 2.17395888873533 16.405066078938 0.209597155604408 0.0745354157461109 AT5G09410_at 9.05680514960486 8.96412720663228 9.70223010266223 9.57734787451066 10.0150290973431 9.73437304324277 9.3797187108261 9.21431512348392 9.58903760617545 9.6430116556745 10.0708247732235 10.0448300437243 9.94924573338823 9.92804667391047 9.90899411272442 10.1770082344751 9.99631041451342 10.015247429142 9.6097914922823 0.072917944845392 0.0763064849955956 0.0743849801391705 0.0742346798619762 0.072917944845392 0.0737160033987575 0.0779857742733756 0.072917944845392 0.086763278301906 0.072917944845392 0.0745798649784072 0.0730598699036993 0.0736656987707384 0.0749819972456737 0.075473252618703 0.0738550212188125 0.0741215843866322 0.0759543368924178 0.0736015436994883 5 5|0 +|/ 2926548 2927268 2926897 2921269 2927417 + gene protein_coding_gene TRUE TRUE AT5G09410.1 EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN); calmodulin binding / transcription regulator calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum) Identical to Calmodulin-binding transcription activator 1 (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) (CMTA1) [Arabidopsis Thaliana] (GB:Q9FY74); similar to calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G64220.2); similar to ethylene-responsive calmodulin-binding protein, putative (SR1) [Arabidopsis thaliana] (TAIR:AT2G22300.1); similar to putative calmodulin-binding transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR06369.1); similar to calmodulin-binding transcription activator [Brassica napus] (GB:AAM10969.1); similar to Putative calmodulin-binding protein similar to ER66 [Oryza sativa] (GB:AAM08530.1); contains InterPro domain CG-1; (InterPro:IPR005559); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.201601579658321 -2.28704340893383 0.0438853624005261 1 2.17320627709214 19.2681234610041 -0.201601579658321 0.0624703221923961 AT5G59520_at 2.09139629738291 2.58103192554226 2.66940288897655 2.27870480801026 2.41624197636405 2.33070655854718 2.26409591867931 2.18452507251036 2.03383198454168 2.63613294212142 2.06595422367750 2.1225727811596 2.35494518877615 2.14659422662761 2.57848261124811 2.24146009099630 1.807875016506 2.57883244399661 2.48197348399665 0.20870101134145 0.207104653312451 0.21541438362709 0.215797034896343 0.220490286575446 0.225544881463904 0.210211387006533 0.214676532253467 0.218299688291845 0.209877008225303 0.220662864583093 0.204427027074144 0.214207579294260 0.209120138456152 0.217644351009688 0.204427027074144 0.218176479083992 0.215299325028403 0.206100684159095 5 5 - 24008684 24009488 24009028 24008479 24010024 - gene protein_coding_gene TRUE TRUE AT5G59520.1 ZIP2 (ZINC TRANSPORTER 2 PRECURSOR); transferase, transferring glycosyl groups / zinc ion transporter encodes a metal ion transporter whose expression is regulated by copper. Identical to Zinc transporter 2 precursor (ZRT/IRT-like protein 2) (ZIP2) [Arabidopsis Thaliana] (GB:Q9LTH9;GB:O81124); similar to ZIP11 (ZINC TRANSPORTER 11 PRECURSOR), cation transporter [Arabidopsis thaliana] (TAIR:AT1G55910.1); similar to zinc transporter [Medicago truncatula] (GB:AAG09635.1); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) -0.238685375334441 -2.28703541238264 0.0438859711776579 1 2.17319424169540 4.66254770229831 -0.238685375334441 0.110272064828258 AT5G14880_at 7.53154192642902 7.49492787729166 8.50256718163465 8.56702200955593 8.67952192865976 8.48433413426805 8.02814706342432 8.20693594285241 7.52235107754758 8.01081462343871 8.37365694927477 8.33414059316978 8.64688563494192 8.45779248598443 8.2766862813655 8.79845950618817 8.43892672181147 8.11660957476857 7.78144211803217 0.132659032277144 0.130194108967442 0.128996166001519 0.133537847186697 0.132570596459352 0.141359399550178 0.131935921429557 0.133454874867694 0.134364546546478 0.135770943076894 0.128697405188768 0.132501708406478 0.125538912725912 0.131279026470019 0.127447495161808 0.129586827855300 0.129980444345848 0.130610650021912 0.132527014788248 5 5 + 4817094 4817553 4817279.818 4814247 4817670 + gene protein_coding_gene TRUE TRUE AT5G14880.1 potassium transporter, putative Identical to Potassium transporter 8 (AtPOT8) (AtHAK8) (POT8) [Arabidopsis Thaliana] (GB:Q9M7J9;GB:Q9LEQ2); similar to KT2 (POTASSIUM TRANSPORTER 2) [Arabidopsis thaliana] (TAIR:AT2G40540.2); similar to KUP3 (K+ uptake permease 3), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT3G02050.1); similar to KUP6 (K+ uptake permease 6), potassium ion transporter [Arabidopsis thaliana] (TAIR:AT1G70300.1); similar to putative potassium transporter HAK1p [Mesembryanthemum crystallinum] (GB:AAK53758.1); similar to putative high-affinity potassium transporter protein 1 [Nicotiana tabacum] (GB:ABI14646.1); similar to putative high-affinity potassium transporter protein [Phytolacca acinosa] (GB:AAX13997.1); contains InterPro domain K+ potassium transporter; (InterPro:IPR003855) -0.193067039936223 -2.28318793318637 0.0441798273291695 1 2.16740483014731 16.2878400870699 -0.193067039936223 0.0475691833652291 AT5G17460_at 2.20633409751049 1.94999884889113 2.65371980874123 2.76620983279866 1.97890891217769 2.36486661284690 2.0458141425645 2.01713713581062 2.08309843714757 1.86463286408900 2.24732644754941 2.38837857351957 2.39866888291639 2.35232168713501 2.51329039310211 2.18996798071675 2.29553642888796 2.24489454856808 1.69413354843923 0.190869920718095 0.198197615021056 0.193152126289108 0.197083048438685 0.204836774478545 0.192829708760053 0.196093022065482 0.187923488297329 0.200303024964826 0.199452480594557 0.188184382865783 0.193720043625769 0.192067872471073 0.198140785223321 0.198979892143827 0.193623717962020 0.193062439483481 0.185875010035712 0.202186459482486 5 5 - 5757670 5758108 5757894.545 5757100 5759721 - gene protein_coding_gene TRUE TRUE AT5G17460.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE78854.1) 0.215111344838684 2.28300124788524 0.0441941338726807 1 2.16712398701438 4.35258354109666 0.215111344838684 0.0826591906396133 AT5G42330_at 3.70662900060782 3.41653328625658 3.8129739566371 3.95745488608564 2.85447387869958 3.93015126114368 3.10393044673029 3.34570706727389 3.35068829540300 3.66734390758366 4.00953980336610 3.96118744013407 3.26055085707825 4.33315338070662 3.98475097852847 3.54299244556455 4.46418653463369 3.83149437297365 3.65092284010502 0.248909976937880 0.239003218553615 0.239003218553615 0.251001811136367 0.239003218553615 0.239003218553615 0.256076196960686 0.239003218553615 0.247713825167636 0.262334244393418 0.244171513187534 0.250693884499638 0.239003218553615 0.239694831632531 0.240064087207702 0.239003218553615 0.252938663592460 0.252152040453545 0.248786395874228 5 5 + 16944254 16944531 16944446.6 16943836 16944716 + gene protein_coding_gene TRUE TRUE AT5G42330.1 unknown protein -0.332689768794921 -2.2824546183327 0.0442360503031547 1 2.16630169183443 7.25588188508952 -0.332689768794921 0.198867446429260 AT5G51840_at 6.26769054729645 6.20863083158435 6.4287607046546 6.41716845804091 6.78662507881452 6.88966722338343 5.83070365329812 5.75285455158866 5.6257451987182 5.51727506330773 7.15090658526354 6.91025816916743 6.67852593389452 6.73418625189603 7.14090003026195 6.40665548902873 6.04348350181653 6.82413109092512 5.75857849240726 0.159072740300166 0.167116742562206 0.162968482135197 0.167990044398187 0.165862080837185 0.160548571775907 0.161356564873705 0.171704079620443 0.171831488167934 0.175523430198052 0.163404526681657 0.165104152052439 0.169187841074845 0.17282882897739 0.159236291617313 0.163369528609969 0.175650644206517 0.160332599679921 0.168823262180724 5 5|0 +|/ 21089980 21091322 21090831.4 21089170 21091664 + gene protein_coding_gene TRUE TRUE AT5G51840.1 similar to ACI13 [Lycopersicon esculentum] (GB:AAY97863.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) -0.184333095599953 -2.28201522990629 0.0442697711296264 1 2.16564075855706 12.5077611975874 -0.184333095599953 0.0246568564327934 AT5G44090_at 7.11924486547284 7.46052000822709 8.52532590258894 8.52447783370896 8.76329389197639 8.27616497159824 7.37740072283694 7.30954365460128 6.53995615792205 7.1127727433671 8.30734155422417 8.02879651493036 7.89968768716496 7.96297075044923 7.68462224035728 8.33169384585069 8.03957174571406 7.84403963114964 6.84538599497116 0.197475595732784 0.189441744942706 0.183038832684474 0.190462391928978 0.18989281217383 0.196515140968049 0.189921871013597 0.183988356311418 0.203599252625504 0.187806958940729 0.178849619785602 0.185389130509326 0.194220952115028 0.188074221690805 0.183081748656779 0.188063473772434 0.195786291208574 0.183848833362114 0.18344228032775 5 0|5 /|- 17760587 17761691 17761117.222 17759993 17765623 - gene protein_coding_gene TRUE TRUE AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT1G03960.1); similar to calcium-binding EF-hand family protein [Arabidopsis thaliana] (TAIR:AT1G54450.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to putative phosphatase subunit, 3'-partial [Oryza sativa] (GB:AAL31038.1); similar to putative protein phosphatase 2A 48 kDa regulatory subunit isoform 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD34016.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.232001613256397 2.28019942518482 0.044409388207641 1 2.16290977295877 15.3420192122014 0.232001613256397 0.103597264636236 AT5G19875_at 5.86346742277872 6.13825755491094 7.12055919163497 7.54572911818603 5.1400795233216 4.64070867691346 4.70072189366384 5.71813337504049 3.42885714436977 3.67469116849157 3.4999436462316 3.89750441914211 4.35866553565277 4.42695387354519 3.17284901338688 4.86111713437325 4.656722110708 4.40583957591467 3.55756174866114 0.249148998424305 0.254771345753656 0.256588982653291 0.266121762734541 0.251913639782383 0.254461275931243 0.253344283822284 0.255296769000814 0.260397273052329 0.245927100474163 0.250068211379607 0.246037401373819 0.250510574729973 0.250050750939107 0.267463609870112 0.245927100474163 0.248673623896425 0.247689068936163 0.253494214772224 5 5 + 6718414 6718751 6718581.727 6718343 6718997 + gene protein_coding_gene TRUE TRUE AT5G19875.1 similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G31940.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE77569.1) -0.350790778884137 -2.27675974398287 0.044675030727544 1 2.15773810007988 9.71528347828632 -0.350790778884137 0.21480932163637 AT5G40380_at 3.37324870346612 3.98296268926375 5.72147325447441 5.63080414326289 6.79211325168891 6.86918766674181 7.69691709301399 7.63746168755327 6.9034354083681 7.39783967628061 9.08741205342574 8.69353135784951 8.56799478170471 8.3249563838025 7.81011180705827 7.69038490191733 6.87377095829187 7.82904621239915 6.93186302672956 0.277271441601200 0.265537578686804 0.258397207592207 0.25877769639143 0.248367682470712 0.269659517501831 0.246614405130423 0.24480312490113 0.256542710560296 0.246825317289575 0.247633348847745 0.246899868118943 0.251225340374954 0.261547282286404 0.247463456049554 0.24467816226662 0.249294128815696 0.245985134674055 0.250591880057340 5 5|0 +|/ 16171516 16172240 16172006.9 16169375 16172405 + gene protein_coding_gene TRUE TRUE AT5G40380.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G70530.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93633.2); similar to Os05g0130100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054549.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.235331726923804 -2.27459677835554 0.0448428584115128 1 2.15448711310572 13.5567029416076 -0.235331726923804 0.107996016435776 AT5G44760_at 2.56253941242107 2.35506142641243 2.67840874222924 2.89317270048545 2.30866293873931 2.63638686566441 2.42479382818289 2.39979584845643 2.70906064565673 2.67550208976707 2.50999951060686 2.16605505426390 2.60570378913538 2.86026678936542 2.63859065678497 2.69286584565074 2.94440464206729 2.9208468626739 2.62710164957815 0.204712233734239 0.211662967056456 0.213921793542078 0.210706839770398 0.206455474274476 0.211289158528512 0.206735503630591 0.207382243683663 0.216536239541331 0.210000863235539 0.209387034578537 0.207115663883390 0.212984413086949 0.204712233734239 0.205959162287348 0.208716443001772 0.206592805696754 0.209222914134674 0.204712233734239 5 5|0 +|/ 18078708 18079952 18079224.7 18077813 18079991 + gene protein_coding_gene TRUE TRUE AT5G44760.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20080.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to Os05g0370600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055351.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.210045762911584 -2.27457717452539 0.0448443822789514 1 2.15445765200549 5.20130093973351 -0.210045762911584 0.0768484583705212 AT5G15680_at 6.12747685301158 6.50099427557522 7.04331430608977 6.73348317804435 7.377541285591 6.94434363164615 6.21953171813744 6.15840156322344 5.56021593877835 6.05299236015306 6.55552969089184 6.93803122686807 6.85817476203943 6.6151216204318 6.2589900612592 6.60373946787314 7.07678371319405 6.70949396079801 5.96852757686918 0.195498293884477 0.198976712249121 0.200088474013590 0.203102635444700 0.195128729267901 0.199464075584058 0.196170124402786 0.202046896380656 0.216652631046655 0.214957108370135 0.210528014380881 0.192778261167514 0.200195952937024 0.202310210598552 0.215728480540827 0.195710345925385 0.205874114526523 0.212103700006413 0.204866625693666 5 5 - 5101250 5101755 5101500.545 5100987 5110796 - gene protein_coding_gene TRUE TRUE AT5G15680.1 binding similar to hypothetical protein [Cleome spinosa] (GB:ABD96931.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96836.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96932.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.239070220095193 -2.26627140197228 0.0454945287392795 1 2.14198189602842 12.9194166955080 -0.239070220095193 0.113070757080647 AT5G60720_at 0.9571956175231 0.957321516641744 1.44069876821966 1.14178719018798 1.09316170445836 1.65796505656666 0.798908939609433 1.50577004829247 1.35592010665065 0.755733916131 1.90431153368771 2.35538782354557 1.42298692993609 1.52399101212228 2.04163634416578 1.5652641016234 1.88564198928692 1.79438677742938 1.85002113016535 0.252240457555814 0.259863016284080 0.258125510922856 0.251254635655642 0.248933500109681 0.253383556554566 0.248933500109681 0.253701172277028 0.272009147486169 0.248933500109681 0.252656325202551 0.248933500109681 0.251893556655431 0.248933500109681 0.25162962258604 0.24901711835394 0.251997574669142 0.25402879877995 0.261557311856248 5 5|0 -|/ 24435664 24436416 24435917.8 24435455 24439460 - gene protein_coding_gene TRUE TRUE AT5G60720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37080.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44737.1); contains InterPro domain Protein of unknown function DUF547; (InterPro:IPR006869) 0.291753377504700 2.26615204294143 0.0455039376487084 1 2.14180270471477 2.76023070433258 0.291753377504700 0.164902444406958 AT5G64370_at 9.50784773293863 9.72256471969678 10.2776120687843 10.2851870652618 10.6947927408397 10.1480752144322 8.8790811106734 8.81922099988688 9.03315963095212 8.51927672859159 9.52651655925601 9.45345223031909 9.5328714443571 9.7718557649219 9.01839995144752 9.65908261462622 9.11574079779824 9.82289816664644 8.55905430422645 0.100329753533419 0.0986942869401104 0.093798743451409 0.098561264827007 0.0983888792568437 0.100030809186037 0.0975504320348261 0.098125495305189 0.109796948259844 0.0988276126264584 0.096469909967366 0.0950387907374153 0.096282832779316 0.097444490863368 0.0997053259142673 0.0949434819905465 0.106390721497610 0.0980355402575046 0.103342755296634 5 5 + 25757592 25758200 25757921.182 25756404 25758438 + gene protein_coding_gene TRUE TRUE AT5G64370.1 BETA-UP (BETA-UREIDOPROPIONASE); beta-ureidopropionase PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. similar to NLP1 (NITRILASE-LIKE PROTEIN 1), hydrolase, acting on carbon-nitrogen (but not peptide) bonds [Arabidopsis thaliana] (TAIR:AT2G27450.2); similar to Os07g0485100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059656.1); similar to Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase [Medicago truncatula] (GB:ABE93097.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010) 0.229328882760979 2.26601260028053 0.0455149320987108 1 2.14159336560413 18.8875139127783 0.229328882760979 0.102182009185616 AT5G05420_at 2.55061848992218 2.27582431546999 2.65954840869788 2.82134592448156 2.43124388185323 2.83612233375846 2.37606605025883 2.37865671987342 2.61639610911210 2.7880265696785 3.02173935111435 2.36047205321592 2.31386125414012 2.6502397499613 2.84370958195858 2.5589219161768 2.53413616248018 2.72206226100877 2.80938873338531 0.166812334513535 0.160876177725898 0.155510631543720 0.157450477012842 0.159270696563897 0.161819962989272 0.163668182165751 0.162615524391861 0.161595868896145 0.158809222655923 0.163730007929707 0.161332414236009 0.164270682286032 0.164105145911564 0.160492911433121 0.162545167209444 0.162165615314116 0.161510285661436 0.154873583152121 5 5|0 -|/ 1604051 1604741 1604463.75 1604041 1604824 - gene protein_coding_gene TRUE TRUE AT5G05420.1 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative similar to immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related [Arabidopsis thaliana] (TAIR:AT4G25340.1); similar to putative immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase [Helianthus annuus] (GB:AAR23804.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) -0.218543849529977 -2.26591756940612 0.0455224263386155 1 2.14145070201864 5.22296822986393 -0.218543849529977 0.0891900882646493 AT5G49880_at 5.83194764476677 6.40296221440972 7.24484981068744 7.19680636064093 7.88671679572231 7.43848061193937 5.88389893623038 5.52031085090722 5.35066783857378 5.60849363513987 6.33222787017932 6.8819030581119 6.77379294791593 6.91207433210793 6.13405571772243 6.87049113843758 6.30812453755756 6.42742406455148 5.50817024379658 0.224165926575557 0.216888137612510 0.216922903742782 0.218712008194846 0.220847029245993 0.225428123719576 0.226383778839765 0.224134931027383 0.216503367982447 0.228678944612955 0.215779520038715 0.226852668430007 0.222982953636378 0.220551977077095 0.217337842072121 0.213426461277591 0.229971849723495 0.219946215854467 0.217346978706868 5 0|5 /|+ 20303559 20304971 20304463.3 20299391 20305310 + gene protein_coding_gene TRUE TRUE AT5G49880.1 mitotic checkpoint family protein similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to Os01g0877300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044973.1); similar to PREDICTED: similar to mitotic checkpoint protein [Gallus gallus] (GB:XP_425231.2); contains InterPro domain Mitotic checkpoint; (InterPro:IPR008672) 0.266004721938961 2.26570029258021 0.0455395654979383 1 2.14112452495509 12.7103077935762 0.266004721938961 0.1407475809896 AT5G50800_at 7.6441021422417 8.0497914513354 9.46733271099448 9.60463666439897 9.1875897150629 9.2910105076069 9.71016739858692 9.96016535854307 6.33712165088683 6.66355585647967 7.73359762638423 6.95012289993734 9.44621960087284 8.58071824205294 5.95909170558786 8.7704216272141 9.59536053531387 7.60062845839906 6.24556824458208 0.182655422431410 0.178104656051753 0.183248564983190 0.188377866336823 0.181562402790526 0.182990389210922 0.184668355764726 0.182633759552997 0.206599871574833 0.204778131196655 0.188709420035361 0.182613160226536 0.182954618183560 0.185625563462040 0.203650146223375 0.176913404853417 0.184302837188738 0.187482097983049 0.190837578454993 5 5|0 -|/ 20682551 20683663 20682911.4 20682303 20684530 - gene protein_coding_gene TRUE TRUE AT5G50800.1 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G25010.1); similar to N3 like protein [Medicago truncatula] (GB:CAC44123.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 0.217316652118350 2.26562591796689 0.045545433720463 1 2.14101287542858 16.3618171624062 0.217316652118350 0.0876673527821405 AT5G58070_at 11.8105441846923 11.8529113010188 12.2931971719306 12.5040280106703 12.5071532574428 12.3010844211663 11.5041834053191 11.6909523400747 10.9603827709255 11.2154026781705 11.7000378655103 11.4692495302827 11.9505277086091 11.8136996247200 11.5768812895162 11.9621545543857 11.9035758199668 11.7525884937267 10.8577595104536 0.0707920950527825 0.0696780791980085 0.0725513207049966 0.0716683142587883 0.071853892480633 0.081187989924813 0.0726517263859373 0.0696780791980085 0.0777422927652205 0.0719971145448885 0.07344549419019 0.0709069939389712 0.0703417232042928 0.0735915901280458 0.0719887992305182 0.070620240060525 0.071326323747364 0.0726524487407704 0.0721168075070252 5 5 - 23517738 23518297 23518045.091 23517287 23518435 - gene protein_coding_gene TRUE TRUE AT5G58070.1 lipocalin, putative similar to temperature-induced lipocalin [Brassica napus] (GB:ABB02398.1); contains InterPro domain Calycin-like; (InterPro:IPR011038); contains InterPro domain Lipocalin-like; (InterPro:IPR013208); contains InterPro domain Lipocalin, bacterial and plant; (InterPro:IPR002446); contains InterPro domain Calycin; (InterPro:IPR012674) 0.198363507564911 2.26140657027924 0.0458795399202259 1 2.13468057328070 23.4466422685508 0.198363507564911 0.0608384039748501 AT5G63720_at 2.02965225586853 2.11085372191787 2.08165833451305 2.24679742709617 1.87366356943921 1.47604866877202 2.17744942763996 2.14250176613056 1.99933839097721 2.25839189447770 2.17881691407024 2.27240045797796 2.47059956672771 2.41825912178481 2.21188606507382 1.81025381786632 2.1322087318467 2.31194608107390 1.98051749521476 0.197407871915098 0.197465990794273 0.195809945233362 0.202685790416549 0.203227268993669 0.199037063310598 0.195220802196220 0.198877860376230 0.197594034818223 0.195908426419007 0.203286916069539 0.193666253880074 0.19975690628612 0.193928674178921 0.193666253880074 0.195299202589128 0.204086799672779 0.205073210285607 0.198896258985362 5 5 + 25524646 25525156 25524867.727 25523575 25525243 + gene protein_coding_gene TRUE TRUE AT5G63720.1 similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86374.1) -0.208246810804577 -2.26113087800284 0.0459014524234245 1 2.13426693640520 4.16993428214346 -0.208246810804577 0.0760621110995749 AT5G58440_at 6.02281274706756 6.4223705923514 7.4278270590019 7.04644714218057 7.67613812358283 7.40580438890473 6.30577571749837 6.39575592378182 6.57842892511464 6.15099558412688 8.19608507322212 8.2388714752623 7.82967682385909 7.85071557587857 7.94470239124751 8.0293195628437 7.2867879809346 7.14790212390928 6.41919887505678 0.196349152268011 0.18151030144685 0.188030904864201 0.183043230514978 0.188906314291888 0.200259537176727 0.188841566186456 0.203517515446772 0.193000820392591 0.187138654347339 0.185371330697468 0.182003555835588 0.186321025970036 0.194412196487974 0.196692276453368 0.183385088030743 0.205283568466871 0.189975829017260 0.186017516779853 5 5 - 23641397 23642579 23642175.636 23641084 23644013 - gene protein_coding_gene TRUE TRUE AT5G58440.1 phox (PX) domain-containing protein similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07120.1); similar to Os05g0474500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055825.1); similar to Os05g0346100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055259.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73617.1); contains InterPro domain Phox-like; (InterPro:IPR001683) 0.233411800404855 2.25983562728759 0.0460045362371612 1 2.13232378873331 13.9370575054599 0.233411800404855 0.107555092478913 AT5G07460_at 8.72478158330603 8.5726131979216 8.5881322468063 8.91496105784073 9.11515905873602 8.65460348704294 8.7784154707583 8.94684890975463 6.48588475834681 8.03855725321407 9.1494197112961 9.11928823459614 9.34432906894458 9.4941265721764 8.98084721906113 9.11372874273946 9.09004622122967 9.48822552984405 6.87990680429055 0.168194998270143 0.162155223919725 0.171941411926821 0.168563792028135 0.172678925590312 0.185686098565792 0.167231259386221 0.167543925520091 0.201497124523923 0.181879655162435 0.168569294017994 0.166259628098398 0.165006466743760 0.164492734305552 0.163608431893924 0.16924662319251 0.176341576241524 0.167567246251274 0.205978810191196 5 5 - 2360859 2361800 2361456.909 2360635 2362014 - gene protein_coding_gene TRUE TRUE AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins. similar to PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G07470.1); similar to peptide methionine sulfoxide reductase [Brassica oleracea] (GB:AAR13689.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 0.231322923126408 2.25865234594336 0.0460989037483832 1 2.13054889435346 16.9655815520724 0.231322923126408 0.105329539831360 AT5G25640_at 2.65122974253128 2.94113269694116 2.94018267277359 2.53112529452213 3.04099698103741 2.91198824804375 2.91710569209636 2.80920631801809 2.97990077045812 2.68705286095352 2.70201290535952 3.05278600755059 3.59950481028897 2.83373147743087 3.09633709573125 3.23690963093232 3.43447545689067 3.31549143225166 2.77574669418103 0.2188134311693 0.217247732644957 0.217290487886135 0.220613700227869 0.210058958123535 0.210761357856738 0.210058958123535 0.210058958123535 0.214026130495214 0.2172098838732 0.215394074377445 0.213347005538058 0.215226398952059 0.210058958123535 0.215859852700328 0.211433796897666 0.212656407941042 0.214553792732366 0.213257660602217 5 5|0 -|/ 8949858 8950257 8950141.222 8949852 8950334 - gene protein_coding_gene TRUE TRUE AT5G25640.1 similar to rhomboid family protein [Arabidopsis thaliana] (TAIR:AT5G25752.1); similar to Os05g0220600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054947.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) -0.219667396008731 -2.25836205582026 0.0461220830533886 1 2.13011350623934 5.82944072770482 -0.219667396008731 0.0915158467979431 AT5G07470_at 9.92903317479836 10.0853604651330 10.8273992168410 10.8920310591206 10.9403334260102 10.5319195874214 9.75858929522742 9.87250979040682 9.2901215509132 9.44215164736357 10.2276557760168 10.0001451504710 10.2873036557336 10.1664042819303 10.1000122288231 10.2755799068519 10.1076814199038 10.1074036261415 9.17324339606384 0.0821689115523906 0.0820543356084178 0.084704137363842 0.083464039803833 0.0803530268392237 0.0889273748274713 0.0818963050525259 0.0810489578961716 0.0843473506000845 0.0865192054817091 0.0801106326928152 0.0801106326928152 0.0801106326928152 0.0818901045810287 0.0814819329557876 0.0801106326928152 0.0890647326172895 0.0828183403944323 0.085246562408645 5 5 - 2362785 2364220 2363756.091 2362571 2364375 - gene protein_coding_gene TRUE TRUE AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); protein-methionine-S-oxide reductase ubiquitous enzyme that repairs oxidatively damaged proteins similar to PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1), protein-methionine-S-oxide reductase [Arabidopsis thaliana] (TAIR:AT5G61640.1); similar to peptide methionine sulfoxide reductase [Capsella rubella] (GB:AAR15455.1); contains InterPro domain Methionine sulfoxide reductase A; (InterPro:IPR002569) 0.209985264287159 2.25720707131276 0.0462144183577532 1 2.12838137424513 20.0850780621270 0.209985264287159 0.079000020675014 AT5G16010_at 10.5265455440835 10.6428921714577 10.9434234564997 10.9858772324665 11.2525734336606 10.855164582682 11.1135578819371 11.0653265393394 10.7589111295532 10.7065106255807 11.3954090815622 11.1859520294524 11.1726510464028 11.3113009927344 11.1123846715662 11.0883726251298 11.1112307913822 11.3300038842157 10.4050589180817 0.091343598607847 0.0799489939113956 0.0897132340359214 0.0863825369520501 0.0800200904629096 0.0920070374239389 0.0835521319565478 0.081884032844618 0.0843468072052396 0.0893229406843536 0.0827037522390501 0.0854862744146 0.0869251454711615 0.085064496826776 0.0869122892399028 0.082298001052812 0.0943216610629245 0.0830173650891348 0.090432669546875 5 5|0 +|/ 5228195 5228985 5228724.2 5227927 5229119 + gene protein_coding_gene TRUE TRUE AT5G16010.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein similar to ATTSC13/CER10/ECR/TSC13 (ENOYL-COA REDUCTASE), 3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid elongase/ trans-2-enoyl-CoA reductase (NADPH) [Arabidopsis thaliana] (TAIR:AT3G55360.1); similar to hypothetical protein DDBDRAFT_0190926 [Dictyostelium discoideum AX4] (GB:XP_646664.1); similar to Os07g0162100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058945.1); contains InterPro domain 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal; (InterPro:IPR001104) -0.205316485346542 -2.25594555821293 0.0463154735021663 1 2.12648976925426 21.8416234542879 -0.205316485346542 0.0725177341360194 AT5G44380_at 2.16750202376143 2.24274229569875 2.10549673452210 2.25453405468759 1.95611397579446 2.00828466429247 1.45823149815476 1.82188588066862 2.19715066158334 2.66816411463822 2.38675724485924 2.11802317014247 2.02339947433636 2.18593786212957 2.39496286548823 2.28021000018378 2.30866195872461 2.4160750485539 2.41518397013395 0.18146255622378 0.189478132612428 0.183876288361241 0.186099351799227 0.191335707774650 0.187450806499597 0.187047484386872 0.204578946614722 0.197681354642078 0.186933940970042 0.182129474217768 0.193298754547824 0.181109924933311 0.193195047006543 0.191900299631830 0.181094687495835 0.192147879229768 0.182968071536287 0.188363230303170 5 5 - 17896192 17896661 17896478.364 17895949 17898667 - gene protein_coding_gene TRUE TRUE AT5G44380.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44390.1); similar to EDA28/MEE23 (embryo sac development arrest 28, maternal effect embryo arrest 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44400.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90048.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) -0.203513035304682 -2.25588771414608 0.0463201122747856 1 2.12640304085405 4.34739207519957 -0.203513035304682 0.0698334027161345 AT5G57520_at 1.11037652227990 1.00746194847317 1.44720169725276 1.74512758178181 1.43048815188243 1.15449417884003 1.68416550251787 1.94108126206070 1.58995817411501 1.30981907601771 1.04186288150093 1.01167715688625 1.25780136738245 1.34304261700617 0.817302521338122 1.64410186829350 0.95881329499192 1.17635550807894 1.33152743782217 0.204445934822266 0.205608891724068 0.20931250977333 0.204892359621184 0.203052180441900 0.201130859173274 0.201130859173274 0.20974895809402 0.213264580966651 0.207326264167042 0.213745666601883 0.202450319370208 0.20263927761724 0.206665174638149 0.206193451094084 0.206108013104361 0.209146210560817 0.20848506226929 0.204929581632821 5 5 + 23313269 23313667 23313484.364 23313195 23313909 + gene protein_coding_gene TRUE TRUE AT5G57520.1 ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding Encodes a zinc finger protein containing only a single zinc finger. Identical to Zinc finger protein 2 (ZFP2) [Arabidopsis Thaliana] (GB:Q39261); similar to ZFP4 (ZINC FINGER PROTEIN 4), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G66140.1); similar to zinc finger protein (GB:AAA87300.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.214211284735166 -2.25429493344927 0.0464480203335768 1 2.12401515720967 2.72345187959596 -0.214211284735166 0.0850488625267111 AT5G45950_at 8.85496931690301 9.36275127252472 9.32961440616358 9.48811149920014 10.2245200083531 9.99290110164595 10.9648366274210 10.8816507061864 9.96928471992003 10.5945277909184 11.8579329790992 11.9435418060067 11.5387265981186 11.4610855768336 11.5636620859584 10.9979354356724 10.5964308991705 11.4498363941617 10.5194215331382 0.108976713544128 0.0976468974771566 0.105475801232814 0.100706939185458 0.0971554894208493 0.0975179026950594 0.0997583437962125 0.0998479381964435 0.101770932855716 0.0978377106590047 0.0989361557148389 0.0985417835064523 0.102337850113747 0.0994903348863748 0.0971554894208493 0.0971554894208493 0.101810821552410 0.0973067218130636 0.097705916395067 5 0|5 /|+ 18653233 18653698 18653431.333 18651306 18653926 + gene protein_coding_gene TRUE TRUE AT5G45950.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G45960.1); similar to Os09g0247600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062663.1); similar to Os02g0110000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045647.1); similar to Lipolytic enzyme, G-D-S-L [Medicago truncatula] (GB:ABE90349.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.227293271597639 -2.25227233695931 0.0466109348483113 1 2.12098359227441 20.781030360568 -0.227293271597639 0.101429973425676 AT5G62070_at 3.55213379745176 3.71767175906898 3.12481683848363 3.28266740567909 3.43374816117158 2.99055366334087 4.17916558000218 4.57091785494767 3.93588621638537 4.01444498354317 6.4017673136015 7.1554665483867 5.11208864695232 6.09359121450043 6.14335517309471 5.70770602056535 4.52380839516508 5.8866623388783 3.90189656545119 0.217863011114909 0.211903998184341 0.213417990205458 0.214236086778676 0.210956912219143 0.218409823829748 0.212404684057051 0.216712216825844 0.222729586196283 0.214137491610674 0.212305123409785 0.211942033630676 0.212505749413157 0.222452905297597 0.22054962971389 0.210721110903161 0.231631447062147 0.211817852676105 0.210877999342964 5 5 - 24947291 24947853 24947620 24947145 24949802 - gene protein_coding_gene TRUE TRUE AT5G62070.1 IQD23 (IQ-domain 23); calmodulin binding similar to IQD24 (IQ-domain 24), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G07240.1); similar to IQ calmodulin-binding re (GB:ABE86306.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.234569947186384 -2.25208369814508 0.0466261571928307 1 2.12070089108202 8.5208585299447 -0.234569947186384 0.109751429619177 AT5G25170_at 5.14193580175347 5.45411821636842 6.15210363022485 6.30075135414334 6.9359467705226 6.39993778949766 5.10862718257157 4.9863364175602 5.24789151741438 4.88860487271723 6.77160754707306 6.57958892870547 6.05170247143605 6.56003747689664 6.43535487691011 6.07192501490221 5.55939825163128 6.45497476100247 5.1472324363264 0.199125681376508 0.195661847517969 0.202274715305050 0.20144087078293 0.199687450018449 0.204314124738773 0.196454843774184 0.194975234904957 0.200935754784814 0.193880129265132 0.199969776077523 0.193791395320265 0.193851815473848 0.198366591613250 0.200217988775123 0.200969386966943 0.199123734541966 0.204663033408606 0.194711563686303 5 5|0 +|/ 8693325 8694321 8693844.9 8693140 8695098 + gene protein_coding_gene TRUE TRUE AT5G25170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25190.1); similar to hypothetical protein 25.t00041 [Brassica oleracea] (GB:ABD64953.1); similar to Os03g0198500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049279.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic; (InterPro:IPR008580) 0.236903622175723 2.25157392328992 0.0466673177840383 1 2.11993695736685 11.5125446161081 0.236903622175723 0.112394263328842 AT5G43990_at 2.11027103384725 2.25138153106675 2.57184340739983 2.52272777526266 2.30297428880740 2.78054122077067 2.64655669695759 2.68003724328285 2.37576055564155 2.81179477719397 3.69988807789049 4.50555688183788 3.08688132435873 3.22879597343895 3.90444260569039 3.52699372872959 3.09553957167567 3.86407718460082 2.54967235046535 0.221551129949172 0.217860700370609 0.223507792858000 0.223410593430942 0.22025969409975 0.220101786707332 0.219710615188786 0.221163281292257 0.217071583753704 0.220784282883053 0.224737786491652 0.221876214033357 0.223597453172617 0.226925276919259 0.222806003123397 0.218742978929479 0.219908349056221 0.225678073320132 0.216558016669421 5 5|0 +|/ 17717767 17718766 17718343.8 17715085 17719232 + gene protein_coding_gene TRUE TRUE AT5G43990.1|AT5G43990.2|AT5G43990.3|AT5G43990.4 SUVR2; histone-lysine N-methyltransferase/ zinc ion binding Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. Identical to Histone-lysine N-methyltransferase SUVR2 (EC 2.1.1.43) (Suppressor of variegation 3-9-related protein 2) (Su(var)3-9-related protein 2) (Protein SET DOMAIN GROUP 18) (SUVR2) [Arabidopsis Thaliana] (GB:Q9FNC7;GB:Q941L4); similar to SUVR1 (Arabidopsis homolog of SU(VAR)3-9 1), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G04050.1); similar to SET-related re (GB:ABE92042.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Pre-SET; (InterPro:IPR007728); contains InterPro domain Nuclear protein Zn2+-binding; (InterPro:IPR003606) 0.215214405513747 2.25080428437337 0.0467295267669936 1 2.11878369301016 5.57984055615509 0.215214405513747 0.0867892240091343 AT5G11480_at 9.41110595772349 9.50127703816306 9.68497577432317 9.47605835337665 10.0370941431537 9.83822920598335 9.75949672049478 9.36356200415776 8.96813543142125 9.31359495178594 9.9516562812401 10.0813026665186 9.76173778547231 9.74449825808517 10.1113446076571 10.0826769474419 9.91605791031077 9.7700271802886 9.30360289559144 0.0949069019418522 0.0933363295332865 0.0935606753052655 0.093754794682519 0.0955331139540645 0.0958822939119244 0.0959263142937702 0.0927743246284438 0.110743384891017 0.0959401885854636 0.0965282519386857 0.0914068839630776 0.095134031368385 0.097951046085917 0.098547093759581 0.0914068839630776 0.0996713267524788 0.0944403718499516 0.095467784484206 5 5|0 -|/ 3669425 3671072 3670321.1 3669194 3671575 - gene protein_coding_gene TRUE TRUE AT5G11480.1 GTP binding similar to EMB2001 (EMBRYO DEFECTIVE 2001), GTP binding [Arabidopsis thaliana] (TAIR:AT2G22870.1); similar to Putative nucleotide binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19136.1); similar to Os01g0732200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044154.1); similar to Os03g0232500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049468.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain GTP-binding; (InterPro:IPR005289) -0.214566663631764 -2.24880638398691 0.046891387372947 1 2.1157904711902 19.1952367984518 -0.214566663631764 0.08619596838127 AT5G65840_at 9.40699088676662 9.49385551893672 10.2205674021823 10.3854130146141 10.5502875113351 10.3030487760487 10.3744053571426 10.3500918911120 9.4574691355258 9.77855917541435 10.6430410724830 10.5306124711098 10.8842153689172 10.7914351673461 10.6929648904774 10.8717114531744 11.0318457304019 10.8155413030194 9.41547492284253 0.0845713659770964 0.0822485226970511 0.0920098723071996 0.085193313562607 0.0816212016159116 0.0931735817922823 0.0840118895709766 0.0861518393748031 0.097615500038224 0.0920789353914536 0.087473620872128 0.0827686274685517 0.0834292006995572 0.0836880308251804 0.0948745276750573 0.0818272040655342 0.0887352532552415 0.0829394376975795 0.0908860267166403 5 5|0 -|/ 26362609 26363222 26363023.3 26360956 26363308 - gene protein_coding_gene TRUE TRUE AT5G65840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37240.1); similar to Os03g0729300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051154.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98680.1); similar to Os03g0729200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051153.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.193272097901371 2.24874525957794 0.0468963478847492 1 2.11569890766335 20.3021685497891 0.193272097901371 0.0537411157105283 AT5G02880_at 8.44315570956635 8.53230971155362 9.5182242562364 9.71298368875395 9.8732823180951 9.5332509705668 8.08850188375163 8.13752342619665 8.7955866310539 8.77271949500036 9.35071276789397 9.15044509401263 9.48176589102716 9.34886754780523 9.00799333980441 9.89920066465281 9.61993667693272 9.51390403821085 8.95259855511845 0.108360952311221 0.105487971693831 0.103384191977495 0.099342008208892 0.100406218614367 0.102926668311824 0.116959464086394 0.107220885565484 0.114638323019426 0.102499798659642 0.101453930251603 0.100421809303077 0.0990918477858573 0.103151773494697 0.104522604474348 0.102874099042257 0.109890324177481 0.104989083808184 0.103360523289364 5 5|0 +|/ 667693 668816 668265.444 662641 669105 + gene protein_coding_gene TRUE TRUE AT5G02880.1 UPL4 (ubiquitin-protein ligase 4) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. similar to KAK (KAKTUS) [Arabidopsis thaliana] (TAIR:AT4G38600.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS72363.1); similar to Os05g0122400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054503.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HECT; (InterPro:IPR000569); contains InterPro domain HEAT; (InterPro:IPR000357) 0.203009034034302 2.24863655880624 0.046905170672987 1 2.11553607716956 18.1108564020568 0.203009034034302 0.0700613044023573 AT5G44630_at 1.7226542242862 2.08011222507522 2.38330637790080 2.18867109868083 1.27579570506772 1.76966856575407 1.48260311644466 2.09164883890958 2.12056610814961 2.12661711848506 1.47845439762691 1.54834348593114 1.77248878868544 1.83550249575941 1.61177864611529 1.91965682821097 1.96239209662685 2.04831331188185 1.98659258006106 0.194006495543069 0.194006495543069 0.200696624478579 0.208897463605844 0.194006495543069 0.198971073453301 0.196777402877137 0.197882188273577 0.194632184382939 0.199953226055302 0.200721155183657 0.194006495543069 0.205944450254740 0.200374652445691 0.202851237333849 0.195313981277920 0.203084109414789 0.205320328476348 0.200054025460622 5 5 + 18022149 18022810 18022509.364 18020482 18022843 + gene protein_coding_gene TRUE TRUE AT5G44630.1 terpene synthase/cyclase family protein Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries. similar to ATTPS12/TPS12 (TERPENOID SYNTHASE12), cyclase [Arabidopsis thaliana] (TAIR:AT4G13280.1); similar to wound-inducible putative cytosolic terpene synthase 1 [Medicago truncatula] (GB:AAV36464.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpene synthase-like; (InterPro:IPR001906) -0.276485461846198 -2.24766072977050 0.046984446208365 1 2.11407441623982 3.79932828164154 -0.276485461846198 0.152887327465591 AT5G16400_at 9.31949870493114 9.61045535102337 10.2047282893339 10.1416573511021 10.2289897716971 10.2162234440864 9.44685056557682 9.69322626120787 9.92272094413764 9.77374287541868 10.9423128046977 10.8176424526574 10.8973410641790 11.0173324574272 10.6653199104432 11.0678057701563 10.5623846043215 10.5824682192243 9.64547405312623 0.144298820602243 0.134937449876056 0.149639096032457 0.146864262987631 0.137280513413801 0.134873355754181 0.138227798784786 0.139014573382852 0.145058795370610 0.137399588063938 0.139823710326241 0.132958492309266 0.137653743627196 0.138579860389714 0.142997938824511 0.140838154985572 0.153180991089866 0.140015593150551 0.145005562662803 5 5|0 -|/ 5363924 5365190 5364842.111 5363664 5365333 - gene protein_coding_gene TRUE TRUE AT5G16400.1 ATF2/TRXF2 (THIOREDOXIN F2); thiol-disulfide exchange intermediate Identical to Thioredoxin F-type 2, chloroplast precursor (TRX-F2) [Arabidopsis Thaliana] (GB:Q9XFH9); similar to ATF1/TRXF1 (THIOREDOXIN F-TYPE 1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G02730.1); similar to Thioredoxin F-type, chloroplast precursor (TRX-F) (GB:O48897); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.200853452938384 2.24735983368627 0.0470089167497196 1 2.11362375122980 20.1575646513444 0.200853452938384 0.0669114633894382 AT5G19760_at 11.5515818636111 11.5924568262921 11.9774341216604 12.0186537690776 11.8700052456499 11.8252763351760 12.3349699815384 12.2723292173682 11.9641208939467 11.9842325992184 12.6187905115993 12.5870400831872 12.5207521974701 12.5728285595475 12.6612718282696 12.7051125905976 12.3907644298702 12.5676323464750 11.8505855739690 0.067052429548643 0.0654698518828013 0.0687671994110512 0.067827942186756 0.0666109264940864 0.072993241912547 0.066075949571281 0.0664856834458364 0.073549440610383 0.0659011187869525 0.0654698518828013 0.0661145645269939 0.0662526040905866 0.0667278444135181 0.0654698518828013 0.0654698518828013 0.0724471860884147 0.0657447571330554 0.0661695658529419 5 5|0 -|/ 6679755 6680770 6680337.9 6679308 6682003 - gene protein_coding_gene TRUE TRUE AT5G19760.1 dicarboxylate/tricarboxylate carrier (DTC) similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G22500.1); similar to Mitochondrial carrier protein [Medicago truncatula] (GB:ABE79078.1); similar to oxoglutarate malate translocator [Solanum tuberosum] (GB:CAA68164.1); similar to dicarboxylate/tricarboxylate carrier [Nicotiana tabacum] (GB:CAC84547.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.179727973326762 -2.24655969428100 0.0470740482070891 1 2.11242543284441 24.1858402987576 -0.179727973326762 0.0166837285662307 AT5G18560_at 1.23754359982657 0.907643420728383 1.10930035189109 0.90662537318544 0.800692785416365 0.751586148453968 0.736784396452111 1.43812726550147 0.96352592741803 1.47881765341809 1.12305944329825 0.972490291547995 0.717292729112203 1.38680773308821 1.16111973344762 0.522449070372594 0.787316782678407 1.45638320292480 1.19943251005994 0.195975900634777 0.193584470234324 0.196769461841750 0.200049470501642 0.191251203037672 0.204152626012663 0.192651661568378 0.198542472173976 0.191673452669186 0.19114011594203 0.194898862953239 0.191426698426206 0.208453640385127 0.192919763709614 0.198034087235617 0.195897474791577 0.19114011594203 0.200396722426757 0.198858708517743 5 5 - 6164870 6165358 6165080.182 6164589 6165993 - gene protein_coding_gene TRUE TRUE AT5G18560.1 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. similar to LEP (LEAFY PETIOLE), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G13910.1); similar to Os07g0669500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060587.1); similar to branched silkless1 [Zea mays] (GB:AAO21119.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.261865722606615 -2.24643887376439 0.0470838905555348 1 2.11224449828902 2.10093303615231 -0.261865722606615 0.138897747955112 AT5G14370_at 6.8356021869104 6.71995445898678 7.15526805879681 6.91985286653147 7.94144369977319 7.56507395667971 6.84888249390441 6.57688737382959 6.14847212397783 6.02722157128712 6.85830351118169 7.49594045984042 6.73386272532817 7.29823503216212 7.22836011392361 7.46590331710383 6.63218697005632 7.00188889556564 6.11802323840739 0.178614724040950 0.182480323710381 0.188490712297256 0.177105976954173 0.189806949146036 0.177998769371206 0.185663818421278 0.185474815581007 0.204029649860734 0.187276733578871 0.181072436751188 0.177304993028821 0.183221166093406 0.185314236074317 0.183888848203783 0.180168956703516 0.190820113465701 0.178051393864329 0.198190706142982 5 5|0 -|/ 4632395 4633189 4632909.4 4631894 4633716 - gene protein_coding_gene TRUE TRUE AT5G14370.1 similar to CIL [Arabidopsis thaliana] (TAIR:AT4G25990.1); similar to CCT [Medicago truncatula] (GB:ABE93500.1); contains InterPro domain CCT; (InterPro:IPR010402) -0.219125287560393 -2.24638265175476 0.0470884712192846 1 2.11216030407555 13.6639910232779 -0.219125287560393 0.0922935159293082 AT5G59940_at 1.49305684785786 1.49476597117082 2.01886637694938 2.09210505979512 1.44467572771022 1.69436757329171 1.70306376755218 1.32895005933043 1.34395979535397 1.88513844415587 1.44344109838042 2.02738127247178 2.09071690592201 2.18759757860312 1.63726763774497 2.04653347718082 2.30177523196286 1.65886949948424 1.45321877524571 0.240941005044136 0.241097167244186 0.244330067520025 0.244370780028398 0.237821060285202 0.240090918623768 0.242566773192004 0.249346094334575 0.254193607232937 0.243140729633045 0.244097391845433 0.242851142106286 0.242499084869714 0.241214025977638 0.24055598507762 0.237772470483173 0.243835839653201 0.240947063375651 0.241134531749620 5 5 + 24156042 24156543 24156265.818 24154638 24156593 + gene protein_coding_gene TRUE TRUE AT5G59940.1 DC1 domain-containing protein / UV-B light-insensitive protein, putative similar to DC1 domain-containing protein / UV-B light-insensitive protein, putative [Arabidopsis thaliana] (TAIR:AT5G59930.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01350.1); similar to ULI3 (UV-B light insensitive 3) [Arabidopsis thaliana] (TAIR:AT5G59920.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) 0.20882503114389 2.24579516494982 0.0471363621052816 1 2.11128056073488 3.40121651094253 0.20882503114389 0.078863178711071 AT5G42080_at 9.7987889497324 9.95694934970305 10.6682051492830 10.7773416258901 10.8154703710152 10.6648739714731 9.74602868465833 9.87175354591344 9.3036866711686 8.99368902800816 9.93144691013463 9.79184214642186 10.0271963036278 9.95008343767693 10.0648489480869 9.79994392089012 10.0147036078589 10.0965918949241 9.06400957353224 0.113217590747799 0.105901487767777 0.117876259643578 0.114459732366504 0.105901487767777 0.117080059002233 0.112920128784750 0.111200472553602 0.114323910667114 0.118078391470035 0.108239490516376 0.105901487767777 0.108463645902566 0.114827684115249 0.109874521008084 0.109436662504257 0.116497849020339 0.105901487767777 0.11142847959003 5 5 - 16838792 16839816 16839120.273 16837512 16841981 - gene protein_coding_gene TRUE TRUE AT5G42080.1|AT5G42080.2 ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. Identical to Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) (DRP1A) [Arabidopsis Thaliana] (GB:P42697;GB:Q39118;GB:Q8L9V5;GB:Q8LPS7); similar to dynamin-like protein B (DL1B) [Arabidopsis thaliana] (TAIR:AT3G61760.1); similar to ADL1C (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G60190.1); similar to SDL5A (GB:AAC49183.1); similar to SDL (GB:AAB05992.1); similar to Dynamin central re (GB:ABE94040.1); contains InterPro domain Dynamin GTPase effector; (InterPro:IPR003130); contains InterPro domain Dynamin central region; (InterPro:IPR000375); contains InterPro domain Dynamin; (InterPro:IPR001401)|Identical to Dynamin-related protein 1A (Dynamin-like protein A) (Dynamin-like protein 1) (DRP1A) [Arabidopsis Thaliana] (GB:P42697;GB:Q39118;GB:Q8L9V5;GB:Q8LPS7); similar to dynamin-like protein B (DL1B) [Arabidopsis thaliana] (TAIR:AT3G61760.1); similar to ADL1C (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G60190.1); similar to SDL5A (GB:AAC49183.1); similar to SDL (GB:AAB05992.1); similar to Dynamin central re (GB:ABE94040.1); contains InterPro domain Dynamin central region; (InterPro:IPR000375); contains InterPro domain Dynamin; (InterPro:IPR001401) 0.189576604755038 2.24217185771208 0.0474327649364962 1 2.10585624566576 19.8274484078447 0.189576604755038 0.0475228080598784 AT5G16440_at 4.39994421452038 5.22823552504905 4.63659418026255 5.29525828629107 5.51797851771694 5.39320189018002 4.14168187018179 4.16706447325043 3.9553241256187 3.78573388553157 5.84278739295187 5.82735034582679 4.93898481348237 5.36190074683132 6.17645939957239 5.77618287995603 4.81409128772413 5.18115665097738 3.70527156404714 0.242771079186494 0.230706311643262 0.237111005201132 0.234891890094519 0.230706311643262 0.233217239769281 0.245215312309957 0.246261681773778 0.240529755211482 0.237934646536082 0.232943191274236 0.233829030854379 0.235246551072453 0.246578457523019 0.232426138837987 0.230706311643262 0.246058366504183 0.234377908829507 0.243421134086920 5 5|0 +|/ 5372541 5373453 5373057.5 5371630 5373738 + gene protein_coding_gene TRUE TRUE AT5G16440.1 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. Identical to Isopentenyl-diphosphate Delta-isomerase I (EC 5.3.3.2) (IPP isomerase I) (Isopentenyl pyrophosphate isomerase I) (IPP1) [Arabidopsis Thaliana] (GB:Q38929;GB:Q42552;GB:Q9FFE1); similar to IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLLALLYL PYROPHOSPHATE ISOMERASE 2), isopentenyl-diphosphate delta-isomerase [Arabidopsis thaliana] (TAIR:AT3G02780.1); similar to isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Brassica oleracea var. botrytis] (GB:AAF36996.1); contains InterPro domain NUDIX hydrolase; (InterPro:IPR000086); contains InterPro domain Isopentenyl-diphosphate delta-isomerase, type 1; (InterPro:IPR011876); contains InterPro domain Isopentenyl-diphosphate delta-isomerase; (InterPro:IPR002667) 0.310324543814208 2.24205039232922 0.0474427323416695 1 2.10567444858339 9.5001485603804 0.310324543814208 0.184456983215934 AT5G47430_at 3.49119707306248 3.51194011571462 3.84809803408493 3.66760727550333 3.93284660806576 4.13036515448061 3.20059591099622 3.45176024038053 3.25676042446112 3.23566621013245 3.79255076226197 3.86946679649826 4.00048652028558 3.57325042933408 3.90232173893187 3.90889724291866 3.89089749815788 3.60262422624358 3.74173171269172 0.208147445748670 0.210478908276799 0.213594174714791 0.208214019234506 0.208356987837427 0.214308201133227 0.216517668310219 0.208897270809593 0.206577341344659 0.208457309901928 0.206897516265164 0.209869721233454 0.216746304362104 0.211159476648129 0.205719068155939 0.203722076170182 0.208970457818790 0.211506791858063 0.220948652973786 5 5 - 19253131 19253607 19253413.182 19252858 19258448 - gene protein_coding_gene TRUE TRUE AT5G47430.1|AT5G47430.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17410.1); similar to hypothetical protein 31.t00039 [Brassica oleracea] (GB:ABD65123.1); similar to Zinc finger, RING-type; Zinc finger, CCHC-type [Medicago truncatula] (GB:ABE84222.1); similar to hypothetical protein 24.t00020 [Brassica oleracea] (GB:ABD64942.1); contains domain RING/U-box (SSF57850); contains domain Retrovirus zinc finger-like domains (SSF57756); contains domain RETINOBLASTOMA-BINDING PROTEIN 6 (PTHR15439); contains domain no description (G3D.4.10.60.10); contains domain no description (G3D.3.30.40.10)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17410.1); similar to hypothetical protein 31.t00039 [Brassica oleracea] (GB:ABD65123.1); similar to hypothetical protein 24.t00020 [Brassica oleracea] (GB:ABD64942.1); contains domain RING/U-box (SSF57850); contains domain Retrovirus zinc finger-like domains (SSF57756); contains domain RETINOBLASTOMA-BINDING PROTEIN 6 (PTHR15439); contains domain no description (G3D.4.10.60.10); contains domain no description (G3D.3.30.40.10) -0.197632004393521 -2.23422271710015 0.0480893325978522 1 2.09396485423628 7.26877531033143 -0.197632004393521 0.0636088975464029 AT5G09900_at 9.6540246571933 9.73819042319822 10.5924309032504 10.6399123020470 10.5407921198454 10.3372966092842 9.85994941785234 9.57479290964032 9.33508327913241 9.14514066071738 10.2171383156127 10.2690715778103 10.1271023267216 10.1970308970407 10.2677411134026 10.2344822310432 10.0049791421832 10.1681250655975 9.3166468290263 0.105190175494363 0.102218416945532 0.105934520475111 0.108142170486022 0.110665818814678 0.107032679021846 0.105392104540148 0.106603323340363 0.115242632405183 0.119577615383043 0.102218416945532 0.103601654450910 0.104235337413032 0.106997553791540 0.108979646956517 0.103067617748335 0.108360943559499 0.109933545114731 0.116870976521894 5 0|5 /|- 3089473 3090251 3089887.667 3089279 3092596 - gene protein_coding_gene TRUE TRUE AT5G09900.1|AT5G09900.2 EMB2107 (EMBRYO DEFECTIVE 2107) similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.1); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.2); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.197187124296083 2.2341143568303 0.048098342800263 1 2.09380284008974 19.8428398794398 0.197187124296083 0.0628888878076968 AT5G65780_at 7.61639536975571 7.55562877082211 8.67550850245394 8.31053553606396 8.79200455232049 8.35430769840649 8.6309350627317 8.29030429307962 7.971074371547 7.92190732235924 8.53148484457943 8.61860927749733 8.48050765829662 8.85416292574037 8.63834154190092 8.89505498502586 8.66006434074591 8.73091459421494 7.86377645142317 0.163452272380763 0.163007185268993 0.164901394980195 0.166327922025474 0.181048729091625 0.181120329912821 0.171680620624443 0.164216447998414 0.169497466432780 0.168365306390534 0.156686638500867 0.1633767871116 0.156686638500867 0.156789777197977 0.159958772486251 0.156686638500867 0.179678643572301 0.162975254111371 0.172733127382049 5 5 + 26334715 26335754 26335147.4 26332616 26336038 + gene protein_coding_gene TRUE TRUE AT5G65780.1 ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant Identical to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5) (BCAT5) [Arabidopsis Thaliana] (GB:Q9FYA6;GB:O49539;GB:Q9FLG9); similar to ATBCAT-3, branched-chain-amino-acid transaminase/ catalytic [Arabidopsis thaliana] (TAIR:AT3G49680.1); similar to branched-chain amino acid aminotransferase [Solanum tuberosum] (GB:AAF07191.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786) -0.237660089192801 -2.23300323591443 0.0481908266297799 1 2.09214168866867 16.5757334245926 -0.237660089192801 0.115377726396174 AT5G60990_at 6.76585348487534 7.38923773400202 7.85475342768877 7.90599507762704 7.70169554638632 7.39386405500431 6.95214653568849 6.8535915688577 5.33049670006481 5.81914885704499 6.2275794651881 6.80459453159128 6.40782449220653 6.75928570068027 6.78960906175364 6.96609252544845 6.76183419354737 6.39043418437893 6.14820851087802 0.224818785425399 0.225615935723829 0.229549961562457 0.220927770055529 0.225872987645264 0.251470146874944 0.224561917732203 0.222735937181826 0.240955262317722 0.22323575395454 0.228397051311003 0.227037259099657 0.234234780866919 0.222544319462413 0.233350754766499 0.221362262274488 0.24864244078564 0.233096291975967 0.220923260696197 5 5 - 24564133 24564756 24564530.727 24563656 24566565 - gene protein_coding_gene TRUE TRUE AT5G60990.1 DEAD/DEAH box helicase, putative (RH10) Identical to DEAD-box ATP-dependent RNA helicase 10 (EC 3.6.1.-) (RH10) [Arabidopsis Thaliana] (GB:Q8GY84;GB:Q8LA24;GB:Q9FME1;GB:Q9ZS10); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT1G16280.1); similar to putative replication protein A1 [Trifolium pratense] (GB:BAE71224.1); similar to Helicase, C-terminal [Medicago truncatula] (GB:ABE88834.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent helicase, DEAD-box; (InterPro:IPR000629) -0.243548564510082 -2.23193371385282 0.0482800093749318 1 2.09054295898973 13.5543212414389 -0.243548564510082 0.121841659747319 AT5G63370_at 8.11761824268783 8.14085740502649 8.95426372296066 8.84727038078752 9.38578008567275 8.66490622964282 8.02693833678365 7.31173542678848 7.6105525903049 7.5645939657575 9.0682650990487 9.04722430569668 8.838776172782 8.91607774100198 8.7976724927732 9.10226707239767 8.52261129491636 8.87828408443708 7.73218782743211 0.162693031513202 0.158063280494027 0.164706292854844 0.157523563890266 0.161719051090881 0.170555854752839 0.165669807966481 0.171638484151347 0.176568327908826 0.175954233236282 0.157795996108384 0.157523563890266 0.161268928759524 0.162958818101286 0.167722135227790 0.162122623177702 0.172642630939762 0.174847270431963 0.162163999865934 5 5 - 25402190 25402667 25402451.636 25401132 25404450 - gene protein_coding_gene TRUE TRUE AT5G63370.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67580.1); similar to Protein kinase [Medicago truncatula] (GB:ABE82023.1); similar to Os02g0602100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047355.1); similar to Os04g0488000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053147.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.300167048261162 2.23080320698162 0.0483744497635875 1 2.08885331505419 16.6972589341504 0.300167048261162 0.17674990022502 AT5G35390_at 1.04570676261219 1.13197371480350 1.28707689547218 1.37350544495909 1.11363691943007 1.27428723063194 1.65409435634729 1.04435301271379 1.56370381852478 1.69441643978988 1.22452046489826 1.35494026271950 1.40230950404623 0.885679351112822 1.47562720687932 1.41753575261267 1.48826950652561 1.17765848396057 1.63738795127609 0.195124877521989 0.185868734881738 0.184180262437346 0.189707209535791 0.186054571951037 0.187415525353666 0.183357911457434 0.185994305951372 0.187858113975248 0.187803716360544 0.182993315747984 0.18805692889556 0.190429612257821 0.187077648275880 0.183849398507919 0.188625894864513 0.194201703149081 0.185739182022045 0.189755312995357 5 5 + 13615614 13616116 13615862.909 13614148 13616206 + gene protein_coding_gene TRUE TRUE AT5G35390.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G07040.1); similar to Protein kinase [Medicago truncatula] (GB:ABE79211.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.233491077633712 -2.22978051913406 0.0484600360299531 1 2.08732503481433 2.70815611035023 -0.233491077633712 0.111147031738326 AT5G66055_at 7.46958884944569 7.51394973491844 8.07812240532684 7.90286927714512 8.81656307677442 8.08982222072618 7.92324482275703 7.59063308083202 7.45909501081762 7.55956098789616 8.12370176926182 8.21944907712554 7.69685005747677 8.13723887458847 8.39491941659767 8.22500381333771 8.07789024391654 8.27920996189862 7.14318986808151 0.155080070511227 0.155164970445189 0.158728592460621 0.155097495136857 0.150849084467923 0.153140283684233 0.158355956690261 0.148452411426697 0.156878564396791 0.153028121227638 0.145308721573215 0.158127207309277 0.154953463787499 0.161944186252744 0.148707050503268 0.154683231317229 0.159640863751695 0.151247748141703 0.148184262189125 5 5|0 -|/ 26435059 26435799 26435416.125 26434382 26436490 - gene protein_coding_gene TRUE TRUE AT5G66055.1|AT5G66055.2 AKRP/EMB2036 (EMBRYO DEFECTIVE 2036); protein binding Identical to Ankyrin repeat protein, chloroplast precursor (AKRP) (AKR) [Arabidopsis Thaliana] (GB:Q05753;GB:Q8GYN6;GB:Q940Y0); similar to EMB506 (EMBRYO DEFECTIVE 506), protein binding [Arabidopsis thaliana] (TAIR:AT5G40160.1); similar to ankyrin repeat-containing protein (GB:AAA32812.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) -0.262460608668991 -2.22640078559073 0.0487439135459668 1 2.08227592319719 15.6888816121776 -0.262460608668991 0.141806063307497 AT5G26850_at 5.8883102068386 5.62414305334987 4.77548851961342 4.43490955297694 5.11760245785234 5.41446091156364 3.48022241903376 4.35876808531326 4.54587190902585 4.31183501292911 6.11590666422909 6.80214088951392 5.43194485977163 5.95917311868071 7.11129835049914 5.75963838812485 4.66948319808013 5.68144586439479 5.40332611739928 0.202705464416323 0.203515763495272 0.202553488142806 0.209988883660714 0.204885956080809 0.209273326833678 0.205921030272309 0.204030912553489 0.210353154346303 0.203116984964396 0.201066665709017 0.209293983229955 0.202273175525135 0.199256027126815 0.201714761370457 0.200884565201814 0.206520826379461 0.202583043147941 0.205839954628256 5 5|0 +|/ 9449437 9450217 9449947.444 9445443 9450822 + gene protein_coding_gene TRUE TRUE AT5G26850.1|AT5G26850.2|AT5G26850.3 similar to cyclin-related [Arabidopsis thaliana] (TAIR:AT2G41830.1); similar to Os03g0308200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049903.1); similar to cyclin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95548.1); contains domain ARM repeat (SSF48371); contains domain UNCHARACTERIZED (PTHR12444) -0.299764907980194 -2.22601699211192 0.0487762507099136 1 2.08170270383736 10.234266449041 -0.299764907980194 0.176968659595322 AT5G35970_at 11.6106024417944 11.5677515830707 12.2535652620904 12.2453903039298 12.1970819371187 12.0241399031149 12.5933238053553 12.5293276274945 12.5700064240221 12.4938906139676 12.9939072789661 12.9554337167642 12.9557112409776 13.1013335669670 12.6871018846290 13.0654578175624 12.8036795692188 13.0410893379732 12.3679048721083 0.0637174718073207 0.0621807608025068 0.0688095325015333 0.0632120712690493 0.0625801166285287 0.0704371615559882 0.0630088481337194 0.0650761101177525 0.0672048397100529 0.0651203267664993 0.0635407332162026 0.0621807608025068 0.0621807608025068 0.0652013937249862 0.0645201315982212 0.0621807608025068 0.065600993513475 0.0627252433205362 0.0637704414365252 5 5 - 14136300 14137193 14136710.364 14136106 14140570 - gene protein_coding_gene TRUE TRUE AT5G35970.1 DNA-binding protein, putative similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G03270.1); similar to putative DNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD08079.1); similar to Os09g0130800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062621.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545) -0.182183880547861 -2.22547635127232 0.048821838262724 1 2.08089527324865 24.8415136604952 -0.182183880547861 0.0327925957612175 AT5G43280_at 6.37205887743107 6.64622007383154 7.36948757915614 7.69451018653907 7.91879095789528 7.61014835935752 6.30471198310957 6.85015461027653 5.93982129709498 5.95030636320448 7.37987670635909 7.44430440639978 7.33367690325436 7.43767844128274 7.40069633312911 7.65316180843937 7.24502985560002 7.2574265704323 5.8701613842648 0.206473663501154 0.19924518772553 0.205126170415032 0.205930696011629 0.200794972992055 0.206237087474259 0.197697018374633 0.201036677113967 0.215541516391265 0.206922212739692 0.199089402587498 0.198727579007080 0.203978701412142 0.201817072494844 0.201796472905736 0.197576791517263 0.208256970470020 0.197576791517263 0.217428579594597 5 5 + 17385442 17386279 17385740.182 17385116 17386627 + gene protein_coding_gene TRUE TRUE AT5G43280.1|AT5G43280.2 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1); delta3,5-delta2,4-dienoyl-CoA isomerase/ enoyl-CoA hydratase|ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination. similar to enoyl-CoA hydratase, putative [Arabidopsis thaliana] (TAIR:AT4G16800.1); similar to Os01g0925200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045254.1); similar to enoyl-CoA hydratase [Pseudomonas fluorescens PfO-1] (GB:YP_348613.1); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753)|similar to enoyl-CoA hydratase/isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G16210.1); similar to Os01g0925200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045254.1); similar to GA21887-PA [Drosophila pseudoobscura] (GB:EAL32000.1); contains InterPro domain Enoyl-CoA hydratase/isomerase; (InterPro:IPR001753) 0.251230746930268 2.22156590686982 0.0491527922799897 1 2.07505689138062 13.7527991915997 0.251230746930268 0.131062143895298 AT5G07010_at 3.85658200612196 3.37179440307604 3.73788999546562 3.98559229054965 2.72963036530298 2.42448381902625 1.35339012579434 1.12917766611119 1.59549905897213 1.43029236023721 1.55224628386904 1.86756381140773 2.16476157118948 1.50278985942676 1.72884370205189 1.53444047024648 1.92186794309355 1.70121083994027 1.85915980795764 0.233697025872253 0.237122087181516 0.232380774971900 0.247921288775961 0.225643195914414 0.23160954505092 0.228921358016026 0.227660636696142 0.228115626755355 0.230131724466511 0.232974316094396 0.230000357811886 0.228177036811042 0.234380915983649 0.225365626154259 0.225365626154259 0.235808341814008 0.234265573212560 0.230744825166571 5 5 - 2175031 2175491 2175312 2174679 2176107 - gene protein_coding_gene TRUE TRUE AT5G07010.1 sulfotransferase family protein similar to sulfotransferase family protein [Arabidopsis thaliana] (TAIR:AT5G07000.1); similar to Sulfotransferase [Medicago truncatula] (GB:ABE88692.1); contains InterPro domain Sulfotransferase; (InterPro:IPR000863) 0.235642912129278 2.21931866732763 0.0493439569817048 1 2.07170310682087 4.51108390186874 0.235642912129278 0.114760308651483 AT5G06700_at 8.77534230339638 9.1320387399417 9.28389962880924 9.35842789161273 9.55928496147692 9.6191967055678 9.51052537816355 9.3777938759738 9.6464662535728 9.50523841058485 10.6582949423666 10.5249178863719 10.198412495039 10.1961450800294 10.2649532302677 10.2196666630046 9.96835459051072 10.3606073314518 9.48886908646551 0.133410969633194 0.120264650432709 0.121318154130573 0.124163552045947 0.120359763097389 0.119171847041442 0.123608735742849 0.128216483839576 0.127364332195185 0.122933800705079 0.117872161975792 0.117872161975792 0.118631228342800 0.119933155616889 0.12183656683829 0.118387853162039 0.123808219238466 0.117872161975792 0.119073544465232 5 5|0 +|/ 2065232 2065780 2065595.1 2063488 2066040 + gene protein_coding_gene TRUE TRUE AT5G06700.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12060.1); similar to lustrin A-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35858.1); similar to Os06g0207500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057100.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -0.198810742949871 -2.21744925585981 0.0495035246372913 1 2.06891397307292 19.2499521577451 -0.198810742949871 0.0679102042561932 AT5G42270_at 11.3007197331677 11.4051327720363 11.8061657433246 11.8369302661416 11.6387557491260 11.5476194721349 11.9575277143218 12.0630438247141 11.5323427790322 12.0423282498742 12.5060813666761 12.4310891098061 12.2661849841991 12.4243526283886 12.3660596824005 12.5805337301704 12.2019143355218 12.4527477295697 11.7393825769606 0.0710331436864989 0.0669691661973607 0.0711369875306353 0.068481599625219 0.0671253844231903 0.0723790503029365 0.0681334247187344 0.0684694160464222 0.0755017727351125 0.0669691661973607 0.0683520168135298 0.0669691661973607 0.0700360682013016 0.0714550601256647 0.069395028194884 0.0685732212462067 0.073542281368295 0.0692344444080556 0.0674813600284224 5 0|5 /|+ 16921583 16922288 16921900.9 16919714 16922522 + gene protein_coding_gene TRUE TRUE AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Identical to Cell division protease ftsH homolog 2, chloroplast precursor (EC 3.4.24.-) (FTSH2) [Arabidopsis Thaliana] (GB:Q9FH02); similar to FTSH1 (FtsH protease 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT1G50250.1); similar to Cell division protease ftsH homolog, chloroplast precursor (GB:Q9BAE0); similar to Cell division protease ftsH homolog, chloroplast precursor (GB:Q39444); similar to Cell division protease ftsH homolog, chloroplast precursor (DS9) (GB:O82150); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.180727153198459 -2.21634689271629 0.0495978511668148 1 2.06726959671986 23.7819727332695 -0.180727153198459 0.0306106303230684 AT5G20570_at 9.61813178368025 9.8937260227085 10.5345586055115 10.4829746544083 10.7418412103974 10.5012897266336 9.7115650352271 9.66513832007086 9.1712976797045 9.37774282341388 10.2496913791965 10.1468160677922 10.2266428865247 10.3006782295573 10.1727786897536 10.0619061410240 10.1441507568476 10.1523337297372 9.31741887285967 0.0998336354812117 0.0934537661721517 0.0991379704848784 0.091073862883355 0.0919547808567014 0.0999072976973255 0.091073862883355 0.0981218059353192 0.102472517708172 0.0933784448247438 0.100427632262927 0.0922733919795532 0.094202359928415 0.0991239960254881 0.0923910975960114 0.0946826163630281 0.0951544749558304 0.0933792096635884 0.0943768420914577 5 5|0 -|/ 6957038 6958189 6957773 6956662 6958313 - gene protein_coding_gene TRUE TRUE AT5G20570.1 RBX1 (RING-BOX 1) Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. Identical to RING-box protein 1a (RBX1a-At) (At-Rbx1;1) (RBX1-2) (RBX1A) [Arabidopsis Thaliana] (GB:Q940X7); similar to ring-box protein Roc1/Rbx1/Hrt1, putative [Arabidopsis thaliana] (TAIR:AT3G42830.1); similar to RING-box protein [Arachis hypogaea] (GB:ABC41134.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.196482355450749 2.21557620193252 0.0496638996946329 1 2.06612011738206 19.8790004333531 0.196482355450749 0.0644343530069074 AT5G47840_at 10.9038701375585 10.7837349262255 11.1969991222896 11.0084941650204 11.4913553049200 11.2120591965529 11.2934077219352 11.0748360204062 11.3582844921283 11.2847650911491 11.9653309641415 11.8857137710012 11.6718067806259 11.8142335103293 11.8179109638263 11.9028829574205 11.2723348850310 11.8320950399146 11.1950564297435 0.078585118904048 0.0749187273893592 0.0763352160788798 0.0764508362829253 0.0762121780556679 0.0767239684611187 0.0764271246716087 0.0758049205659243 0.08893012604961 0.0746287666102189 0.0763949189508105 0.0757966973355555 0.0742965592826236 0.0760695764867924 0.0770617859476963 0.0742965592826236 0.0884140389026781 0.078707217992062 0.0761204287360511 5 5|0 +|/ 19394190 19395253 19394823.5 19392667 19395565 + gene protein_coding_gene TRUE TRUE AT5G47840.1 adenylate kinase, chloroplast, putative / ATP-AMP transphosphorylase, putative Identical to Probable adenylate kinase 2, chloroplast precursor (EC 2.7.4.3) (ATP- AMP transphosphorylase) [Arabidopsis Thaliana] (GB:Q9FIJ7); similar to nucleotide kinase [Arabidopsis thaliana] (TAIR:AT5G35170.2); similar to Os08g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060810.1); similar to Adenylate kinase, chloroplast (ATP-AMP transphosphorylase) (GB:P43188); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) -0.201642241765396 -2.21535084001025 0.0496832292461986 1 2.06578401470634 22.6454232143852 -0.201642241765396 0.0725481999783245 AT5G48340_at 6.80221637397894 7.08624867944382 8.00426786102992 8.25760502485521 8.50587342651078 8.05067559226579 6.81130126251286 7.13419540777018 7.39835424201659 6.83219127042347 8.42649968594151 8.52054482063523 8.24199844330616 8.2726094374472 8.20512547706965 8.61824753039755 8.05282310070337 7.99514432698221 7.18059585011424 0.197294660823173 0.188123122680271 0.196021648458968 0.189677113669054 0.189052196848568 0.193373447072303 0.194809977339620 0.198070761555684 0.186405716784257 0.191030273614316 0.189362279878066 0.186385581338152 0.185596414531554 0.188630067316377 0.195418546160719 0.185596414531554 0.189683567159178 0.188587342945764 0.185596414531554 5 5|0 +|/ 19609032 19609522 19609258.2 19607699 19610179 + gene protein_coding_gene TRUE TRUE AT5G48340.1 similar to Os01g0897100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045085.1); similar to hypothetical protein DDBDRAFT_0218214 [Dictyostelium discoideum AX4] (GB:XP_641450.1); contains domain no description (G3D.1.10.418.10) 0.236920998603875 2.21303165683761 0.0498825679772456 1 2.06232580935332 15.2958835653768 0.236920998603875 0.116900925314826 AT5G53960_at 1.35161120863655 1.33465465610133 1.70778267798172 1.13468029174820 1.00876189388101 1.25542213597212 1.17034374398491 1.15675865424278 2.22582043459382 1.35671791984633 1.47946387540257 1.14690720470625 1.56288925301334 1.49687988112407 1.60915206195240 1.27397068946206 1.70856293985883 1.68131064372024 1.74594233193780 0.209501612986842 0.210926139301155 0.208744603183374 0.212138046252492 0.208340336636758 0.21782128523736 0.215679006108043 0.216516112815345 0.217946970859131 0.218879387345855 0.220884987654510 0.21256398064019 0.220436441961741 0.209176828760138 0.210391414002185 0.208340336636758 0.214731396015729 0.225487835184142 0.209633361184390 5 5 + 21924968 21925548 21925285.818 21924864 21925892 + gene protein_coding_gene TRUE TRUE AT5G53960.1 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) contains InterPro domain DNA topoisomerase, type IIA, subunit A, alpha-helical; (InterPro:IPR013757) -0.228871269498034 -2.21178807260578 0.0499897724038945 1 2.06047191630780 2.90052805654239 -0.228871269498034 0.108039303032821 AT5G20370_at 3.0353285141601 2.60809149615331 2.63916403511443 2.68856203356886 1.88886850482957 2.98289791234049 2.06024877621077 2.39341546477068 3.19745343035513 2.61949285315676 3.09189744234521 2.65490439542106 3.08164479784144 2.82166106089396 3.30122481550757 2.82596114666793 3.16947245365327 2.5532099444804 3.01173485374626 0.228742123708558 0.222087971873541 0.23045001947871 0.233871431156945 0.232467997534684 0.224293843141983 0.221751769201842 0.226280228619447 0.228876476087557 0.2259000131413 0.222249916975916 0.225714636855410 0.225553550566988 0.234545934771428 0.227119170306443 0.220342553600196 0.220342553600196 0.220393609530623 0.224580285333106 5 5 - 6886942 6887421 6887209 6886933 6887460 - gene protein_coding_gene TRUE TRUE AT5G20370.1 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT5G11090.1); similar to CTV.15 [Poncirus trifoliata] (GB:AAN62344.1) -0.336726447637622 -2.21087844605748 0.050068327550133 1 2.05911607708526 5.4772674519039 -0.336726447637622 0.211443625605425 AT5G18500_at 7.23671696390744 7.26768507520662 7.13214802839289 7.21117479298032 7.85468605317301 7.46910805422235 7.49397717632321 7.38986653837901 8.11670878849626 7.4669042186127 10.1056564992101 9.65639431228382 8.94267354791314 9.5960939636037 9.27884995052531 8.9762540514799 7.98235287250314 8.96759883716743 7.83294173668949 0.191868075482588 0.192773226533975 0.198101345441698 0.199562118357528 0.195135223154960 0.211053616189796 0.197720700303657 0.192761806274392 0.208771504074477 0.198068377700375 0.194097543548077 0.192996605356154 0.195424828529609 0.194482997422388 0.189580009418269 0.189008386009980 0.205586426320235 0.190570120109862 0.193645139247657 5 5|0 +|/ 6140459 6141249 6140913.5 6138385 6141632 + gene protein_coding_gene TRUE TRUE AT5G18500.1|AT5G18500.2 protein kinase family protein|kinase similar to GPK1 (Glyoxysomal protein kinase 1), kinase [Arabidopsis thaliana] (TAIR:AT3G17420.1); similar to putative receptor-like protein kinase 3 [Glycine max] (GB:AAU10525.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.199970385714869 -2.21066939337146 0.0500863980147326 1 2.05880449871037 15.8787965864574 -0.199970385714869 0.0706592325578531 AT5G35510_at 0.662217221645171 1.01088853406321 1.89843362697762 1.80573041299057 1.48050043960742 1.12912534616984 1.97572837131364 2.08470412598738 1.91278290580811 2.84528788824443 2.10029838100039 1.716443421958 1.63962257256625 2.18269903640364 1.70473458441074 2.44782787150795 2.56114118597135 1.53325975857452 2.05720633325256 0.174241961523683 0.176796829229214 0.190823173866235 0.176749784719935 0.174371700696293 0.176879175874896 0.180797771877718 0.174367252494262 0.189527992331327 0.175224779827203 0.177812684228131 0.179394523523386 0.178206805535584 0.181452676280813 0.179275243921915 0.177996008733001 0.186258812652157 0.181566933969703 0.177223633066602 5 5 + 13717089 13717241 13717184.091 13717060 13717266 + gene protein_coding_gene TRUE TRUE AT5G35510.1 unknown protein -0.212795458716433 -2.20647499392589 0.0504502849857613 1 2.05255494512679 3.63467220683643 -0.212795458716433 0.0891703079361306 AT5G65320_at 0.892490452816508 1.728312624222 1.05715556173130 0.721203785315708 0.916019597011241 0.55764006012874 0.876607349347932 1.59880241541226 0.702827473014988 1.53113055114413 1.24991002122188 1.55328740620115 0.932099014125388 1.30607324362657 1.47830522163619 0.980466488894818 1.09014342143980 1.10214066237647 1.56605960243084 0.213561886023682 0.214161665864982 0.221887839347674 0.205287204761163 0.206636635271647 0.205287204761163 0.205287204761163 0.213330523341126 0.215103510425693 0.208586997665131 0.208160641492348 0.215700986722516 0.213089201840309 0.205287204761163 0.21305427091598 0.205287204761163 0.205412728424848 0.214319390100557 0.214752697957001 5 5|0 -|/ 26124646 26125537 26125085.5 26124395 26125952 - gene protein_coding_gene TRUE TRUE AT5G65320.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein (bHLH096) [Arabidopsis thaliana] (TAIR:AT1G72210.1); similar to helix-loop-helix DNA-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19748.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.332679965571618 -2.20124702354238 0.0509073881401165 1 2.04477050497262 2.28264184431668 -0.332679965571618 0.209207550566728 AT5G08350_at 3.44313515902203 4.2462937947474 2.73112966144216 3.58841629263861 5.39117113808481 4.95458607226252 3.24971797197487 4.249461909021 2.25711189134103 2.30573203641668 2.12696272493878 2.59617946304598 2.31214833094091 1.70050568442354 2.45867807026706 2.08644006350467 1.31388727450752 2.03039830613211 2.47549406423859 0.281528625675356 0.281645733750614 0.28592594880368 0.28257024422108 0.283888092397609 0.277940410298484 0.275387016998804 0.275387016998804 0.289669582219894 0.276075737539675 0.27674645782535 0.275387016998804 0.276265642081726 0.277841027380229 0.278186746967009 0.278628593785214 0.284209668153176 0.280475265723344 0.276280598680086 5 5 - 2686438 2687083 2686727.364 2686246 2687250 - gene protein_coding_gene TRUE TRUE AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related similar to GRAM domain-containing protein / ABA-responsive protein-related [Arabidopsis thaliana] (TAIR:AT5G23370.1); similar to Os02g0636700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047525.1); similar to Avr9/Cf-9 rapidly elicited protein 140 [Nicotiana tabacum] (GB:AAV92899.1); similar to Os04g0526800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053364.1); contains InterPro domain GRAM; (InterPro:IPR004182) -0.414023157293996 -2.20074164844878 0.0509517849223277 1 2.04401830448472 6.1938703267586 -0.414023157293996 0.277433053803316 AT5G41760_at 5.11166819551363 5.59112833490219 5.73793287486608 5.68349587161592 7.31289292895377 6.22252910393649 6.60971475535133 6.30285104572697 6.06454709965813 5.44641202572589 7.06660628226097 7.40383041034819 6.73446846065992 6.89682629050614 7.18625798457454 6.5891877763587 5.85737288433309 6.64301548037582 5.6694239334863 0.243542793323036 0.236930001462227 0.237675451422898 0.239865123894049 0.240817219661761 0.248396239635294 0.241996051053493 0.233748420261325 0.24690769993591 0.239024591855197 0.240063429765213 0.236510699597243 0.233748420261325 0.237865738195711 0.238275167984732 0.233748420261325 0.269093597487383 0.237928294695394 0.234066339705133 5 5|0 +|/ 16725567 16726354 16726024.1 16724114 16727137 + gene protein_coding_gene TRUE TRUE AT5G41760.1|AT5G41760.2 nucleotide-sugar transporter family protein|nucleotide-sugar transporter similar to nucleotide-sugar transporter [Arabidopsis thaliana] (TAIR:AT2G43240.1); similar to Os07g0573700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060069.1); similar to Os06g0523400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057753.1); similar to Predicted UDP-galactose transporter (ISS) [Ostreococcus tauri] (GB:CAL52633.1); contains InterPro domain UDP-galactose transporter; (InterPro:IPR004689); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271) -0.336924300528899 -2.19984759843176 0.0510304173380345 1 2.04268773112123 12.3335216634253 -0.336924300528899 0.213068456743177 AT5G07350_at 8.6667664480165 8.63283136262377 9.07054620187965 9.25305037612024 9.04860930285171 8.93822907707305 8.4432810463896 8.42091907213927 8.4616183254562 8.59105691695746 9.25890222820844 9.78319459099296 9.03675628424514 9.01952227047396 9.1025914545464 9.08095791322513 9.2309490903114 9.31437633661015 8.5631292939016 0.137117674375521 0.142867860580629 0.139543002971609 0.144843885735189 0.136595198874798 0.149884003825746 0.143148899181927 0.136595198874798 0.139166924993523 0.143724299051999 0.145308430483750 0.138830748024175 0.139774746783701 0.156008799357479 0.142916590342958 0.139219810001545 0.140188491266903 0.139741433117867 0.150385888471221 5 5 - 2320350 2320778 2320545.714 2320082 2325420 - gene protein_coding_gene TRUE TRUE AT5G07350.1 tudor domain-containing protein / nuclease family protein similar to tudor domain-containing protein / nuclease family protein [Arabidopsis thaliana] (TAIR:AT5G61780.1); similar to Tudor; Staphylococcus nuclease subtype [Medicago truncatula] (GB:ABE80217.1); similar to RNA binding protein Rp120 [Oryza sativa (japonica cultivar-group)] (GB:AAP85377.1); similar to 110 kDa 4SNc-Tudor domain protein [Pisum sativum] (GB:BAC06184.1); contains InterPro domain Maternal tudor protein; (InterPro:IPR008191); contains InterPro domain Staphylococcus nuclease subtype; (InterPro:IPR006022); contains InterPro domain Tudor; (InterPro:IPR002999); contains InterPro domain Staphylococcus nuclease (SNase-like); (InterPro:IPR006021) -0.181778431524873 -2.19974435912856 0.0510395048004254 1 2.04253409562505 17.6927830024776 -0.181778431524873 0.0375744740124707 AT5G64620_at 8.40418025073244 8.75131139349675 8.0582753887108 8.3079205268827 8.66070728214748 8.82194890848176 6.30843144013449 6.58261435191311 8.06916872358059 6.60176216349351 8.72219994504296 8.63704344741304 7.78799876044309 8.42564423935564 8.95476202299087 8.39150714102453 7.15610550006714 8.74285408801489 6.30007055833863 0.195236220631573 0.192187937059266 0.199916914999807 0.196063340805163 0.192690908511171 0.189821095728338 0.209156163300767 0.215825750997323 0.191225249043437 0.207217783955473 0.189704663952018 0.189020267551393 0.192182728001781 0.191017197244085 0.196565938521464 0.191228051599404 0.201822938168052 0.192889085119922 0.218813904761161 5 5 + 25849132 25849607 25849364.455 25849060 25849728 + gene protein_coding_gene TRUE TRUE AT5G64620.1 C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2); pectinesterase inhibitor Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. similar to C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1), pectinesterase inhibitor [Arabidopsis thaliana] (TAIR:AT1G47960.1); similar to nvertase/pectin methylesterase inhibitor -like [Oryza sativa (japonica cultivar-group)] (GB:BAD09396.1); similar to Os08g0108100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060803.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.214507977290886 2.19961376411011 0.0510510024233344 1 2.04233975394366 15.6582227969032 0.214507977290886 0.0922233383634387 AT5G66360_at 6.76020507384746 6.74525661195549 7.3713556281928 8.01248889756228 7.68398240203515 7.27080590832289 6.25960889560512 6.35344118410734 6.49077040639432 6.3262185537077 6.5495567908012 7.12602141251768 7.02416585216086 6.91053459707711 6.68771596791643 7.01903389873953 6.88837521875653 6.82081214686827 6.2475982641398 0.266832385438882 0.259208448277919 0.272260267226345 0.266750279804622 0.260320467624473 0.272695971598048 0.257085138507559 0.259869784279626 0.267999175388461 0.253116231612469 0.259371088745225 0.250807695992979 0.252531932368663 0.269977207027939 0.257387760780735 0.250023933140554 0.267557236783412 0.251770862925646 0.250023933140554 5 5 + 26528343 26528849 26528606.364 26527455 26529028 + gene protein_coding_gene TRUE TRUE AT5G66360.1|AT5G66360.2 ribosomal RNA adenine dimethylase family protein similar to dimethyladenosine transferase, putative [Arabidopsis thaliana] (TAIR:AT2G47420.1); similar to hypothetical protein [Thellun (GB:ABB45840.1); contains InterPro domain Ribosomal RNA adenine methylase transferase; (InterPro:IPR001737); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain RRNA 16S rRNA dimethylase; (InterPro:IPR011530) -0.250480307722581 -2.19823532953408 0.0511725115818722 1 2.04028868970046 13.6737127720462 -0.250480307722581 0.133015294660828 AT5G01750_at 12.4799554892206 12.5308824386529 13.1239162276501 13.0424665437924 13.2451877751638 13.1173035715173 12.7626689758463 12.6052753822068 12.0567008242279 12.1977432779654 12.7901809256089 12.7157382857201 12.8711189352425 12.7150436759483 12.6828653122183 12.8402812966724 13.0434570956124 12.9682170437061 12.0238457157397 0.0572873048033869 0.0570042808443639 0.0570042808443639 0.0592772141998901 0.0630211552920157 0.0590587402629982 0.0590364668318815 0.058476270559363 0.0628392088590494 0.0599750587573042 0.0570042808443639 0.0570374232155351 0.0589482351095316 0.0570042808443639 0.0584267141206354 0.0575078267804724 0.0622746920269818 0.0588097263256224 0.0612187246911926 5 5 + 290035 290651 290324.818 289762 291323 + gene protein_coding_gene TRUE TRUE AT5G01750.1|AT5G01750.2 Identical to Protein At5g01750 [Arabidopsis Thaliana] (GB:Q9LZX1;GB:Q8LEK9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11740.1); similar to Protein of unknown function DUF567 [Medicago truncatula] (GB:ABE88870.1); contains InterPro domain Protein of unknown function DUF567; (InterPro:IPR007612)|Identical to Protein At5g01750 [Arabidopsis Thaliana] (GB:Q9LZX1;GB:Q8LEK9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11740.1); similar to Protein of unknown function DUF567 [Medicago truncatula] (GB:ABE88873.1); contains InterPro domain Protein of unknown function DUF567; (InterPro:IPR007612) 0.182109687035548 2.19790941425852 0.0512012815112722 1 2.03980379712412 25.324020097499 0.182109687035548 0.0388332190223527 AT5G28750_at 10.5623303473029 10.7067883188760 11.0660004742604 11.0973594311944 11.1549069526652 10.9453828326598 11.0809496459105 11.1337615710318 10.7917018014532 11.1231191308479 11.7494112610288 11.7818133771549 11.4047702158667 11.5303123156477 11.7847342770839 11.7648957260772 11.2511380186813 11.3789674835161 11.1058697924794 0.0861292142037983 0.082811364433475 0.0859108491930264 0.0865341139040193 0.082811364433475 0.085299191893916 0.083468497198106 0.083584870424695 0.0935659696247369 0.0830258648252564 0.0857619582110598 0.082811364433475 0.0837496997366499 0.0870953793992582 0.082811364433475 0.082811364433475 0.0908272062769652 0.0850968456051687 0.0833199179676879 5 5 - 10784154 10785551 10785015.091 10783987 10785726 - gene protein_coding_gene TRUE TRUE AT5G28750.1 thylakoid assembly protein, putative similar to HCF106 (High chlorophyll fluorescence 106) [Arabidopsis thaliana] (TAIR:AT5G52440.1); similar to Tha4 protein [Pisum sativum] (GB:AAD33943.1); contains InterPro domain Bacterial sec-independent translocation protein mttA/Hcf106; (InterPro:IPR003369); contains InterPro domain Twin-arginine translocation protein TatA/E; (InterPro:IPR006312); contains InterPro domain Twin-arginine translocation protein TatB; (InterPro:IPR003998) -0.184732238565542 -2.19686090529147 0.0512939429795141 1 2.03824399060629 22.2622610680588 -0.184732238565542 0.0453062748409228 AT5G25620_at 1.78795822341361 1.53275974207681 1.71992661809205 1.64804910997173 1.98931467070414 1.84830502921217 1.62010865601037 1.84671762617893 1.61148688628996 1.78955917031523 2.10388669204938 2.01153078709561 2.37883155300335 2.12712005678139 2.10784035582261 2.29708927319439 2.51657154868012 2.25785028265917 1.54277008717553 0.224058823522152 0.219177568832848 0.226047988677308 0.237027146484391 0.22421950104094 0.249143715749151 0.222274756640801 0.221698947989773 0.244101847457866 0.225241870270171 0.221667860265784 0.219604207058003 0.226488908239549 0.228126895086339 0.220388640633257 0.227273742806846 0.218767711914020 0.226247970276270 0.226804821865140 5 5|0 -|/ 8935617 8937540 8936239.111 8935112 8938669 - gene protein_coding_gene TRUE TRUE AT5G25620.1 YUC6 (YUCCA6); monooxygenase similar to YUC2 (YUCCA2), monooxygenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G13260.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I; FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Medicago truncatula] (GB:ABE83417.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.195049957155807 2.19485623175265 0.0514715522214259 1 2.03526239861540 3.68565685108464 0.195049957155807 0.0651035199732119 AT5G64010_at 5.31559211745835 5.77920971208897 6.49247106675971 6.27911398343331 5.48743734506037 5.61153131407422 3.86226525450152 4.32089172806544 4.74421219779675 4.49101031375928 4.68359443026856 4.95354125326035 4.92966347062095 5.09963881691029 5.07209736752193 5.17683955149113 4.57876821175558 5.09189370041444 4.83467712688456 0.253654230525138 0.250833615557953 0.251898202898049 0.257496691962131 0.256037095818187 0.256352353953943 0.256325816122503 0.246395054414745 0.272930003471061 0.253374945125991 0.246063038340488 0.246063038340488 0.254537052648222 0.24693850838127 0.246063038340488 0.246063038340488 0.251568820398527 0.246063038340488 0.251017396802292 5 5|0 -|/ 25636194 25637020 25636631.143 25635832 25637405 - gene protein_coding_gene TRUE TRUE AT5G64010.1 unknown protein -0.237951841145734 -2.19056714795718 0.0518535341803894 1 2.02888601600822 10.2126746383939 -0.237951841145734 0.120667639875539 AT5G02250_at 7.46712512112906 7.25308668332991 7.83297461801396 8.11066474685216 8.7653363876416 8.37507819698852 8.18681364508373 7.50732523574176 7.81506269272567 7.57195444356439 8.28738665800078 8.4927029768509 8.26353004971102 8.36199899751762 8.59460713877254 8.60505338443743 8.28848199593127 8.35854888807638 7.93396301955421 0.15954734724557 0.155922171765172 0.159374365816251 0.152651551138404 0.163460835144171 0.163255149125929 0.155734897966132 0.157130862194441 0.162615393127230 0.160358216659978 0.162252396093654 0.157833327983645 0.153223129408422 0.155086570385714 0.158667035829239 0.150621545087316 0.164410177591615 0.158350174158887 0.158045939536526 5 5|0 +|/ 458215 459005 458573.5 454781 459525 + gene protein_coding_gene TRUE TRUE AT5G02250.1 EMB2730 (EMBRYO DEFECTIVE 2730); RNA binding / ribonuclease similar to ribonuclease II family protein [Arabidopsis thaliana] (TAIR:AT2G17510.1); similar to ribonuclease II-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81730.1); similar to Os01g0841800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044770.1); contains InterPro domain Ribonuclease II and R; (InterPro:IPR001900) -0.264648563540707 -2.18738807268309 0.0521384088908215 1 2.02416236057485 16.0273999859028 -0.264648563540707 0.148558152409595 AT5G11450_at 9.51819060921622 9.4940673153089 9.77663042309187 9.63783473141593 10.2680418766221 9.75911317726455 10.2905793801469 9.95723200584047 9.7001540099562 9.81091491582062 10.5751594052621 10.8804695867852 10.4583996223661 10.5015057881278 10.8670213060102 10.4135976969154 10.3228681448182 10.2588122326194 9.57897771493269 0.0888876365056257 0.085278317420663 0.0882749931485726 0.0871932141357305 0.085278317420663 0.0859807567375089 0.0863675923110489 0.0956043324651743 0.0945074556831128 0.088270887029965 0.0862087171364267 0.0854890966097544 0.0882700837457622 0.0906086816572032 0.085278317420663 0.085278317420663 0.0904450450930703 0.0896061681767476 0.09190521764193 5 5|0 +|/ 3655217 3656299 3655796 3654428 3656556 + gene protein_coding_gene TRUE TRUE AT5G11450.1 oxygen-evolving complex-related similar to Os01g0617900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043586.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61296.1); contains InterPro domain Photosystem II oxygen evolving complex protein PsbP; (InterPro:IPR002683) -0.226307849799728 -2.18676648331140 0.0521942838212083 1 2.02323901964821 19.9534169080798 -0.226307849799728 0.108069148734150 AT5G66020_at 1.55564966012448 1.34736370674276 1.57051552483769 1.69274871395701 1.27895983596699 1.51165895520087 1.43430443284807 1.90400496435504 2.04625345718171 1.33350949886703 1.40385528591421 1.18964303871710 1.68137007190648 1.50096226532049 1.49105613587158 1.68235025840813 1.69348480847312 1.48696787522569 1.67252958397926 0.191369028722347 0.193311644793358 0.191406072709639 0.194357709328614 0.194587424749629 0.199391615636908 0.198667099852427 0.20330356386947 0.200628775326670 0.197305001377017 0.193187499152889 0.191558716053984 0.195469251922395 0.195031128699144 0.189947939354468 0.189806802500116 0.198334231645807 0.202904251439143 0.191998456628124 5 5|0 -|/ 26418505 26419522 26419040.889 26418419 26421917 - gene protein_coding_gene TRUE TRUE AT5G66020.1 ATSAC1B/IBS2 (IMPAIRED IN BABA-INDUCED STERILITY 2); phosphoinositide 5-phosphatase Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13. similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G51460.1); similar to Os02g0554300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047117.1); similar to MGC84016 protein [Xenopus laevis] (GB:AAH74260.1); similar to Similar to SAC domain protein 7 [Oryza sativa (japonica cultivar-group)] (GB:AAX96819.1); contains InterPro domain Synaptojanin, N-terminal; (InterPro:IPR002013) -0.219124811448164 -2.18404048718646 0.052440001911281 1 2.01919066455801 3.13705508966525 -0.219124811448164 0.0998769007083228 AT5G19440_at 9.47672833452547 9.24197363360551 10.0375329862520 9.99439568541042 9.6416892273553 9.55429479324649 8.78900547968618 8.63821457433837 6.92277214358056 8.00516831226622 8.71966344382629 8.67844726061 8.50988649906633 8.57111011469817 8.72607201532694 8.20115408436242 8.91056967645212 9.04861874785905 7.42147547140346 0.135541008762797 0.137394761648994 0.145885057479946 0.142870586311843 0.135215316771985 0.138865390761468 0.137614776086267 0.134031320881464 0.158015679498703 0.143293091327038 0.140258836269962 0.132338388475082 0.136944250592058 0.136856342464050 0.132338388475082 0.139286289500147 0.132338388475082 0.138447412423094 0.151246741965839 5 5|0 +|/ 6557220 6558001 6557656.8 6556422 6558344 + gene protein_coding_gene TRUE TRUE AT5G19440.1 cinnamyl-alcohol dehydrogenase, putative (CAD) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase similar to cinnamyl-alcohol dehydrogenase, putative (CAD) [Arabidopsis thaliana] (TAIR:AT1G51410.1); similar to putative cinnamyl alcohol dehydrogenase [Malus x domestica] (GB:AAC06319.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.186294072741321 2.18281618124307 0.0525507190985971 1 2.01737297843783 17.4819771089818 0.186294072741321 0.0511452747754386 AT5G51580_at 1.10947565515441 1.37128800579082 1.64628306512046 1.82072667349891 1.92234026289762 1.40608631653764 1.35378004092778 1.12364844140323 1.41903723034277 1.44876298622332 1.35304271255126 1.27247697148020 2.06219083322766 1.99592871486716 1.43647783458177 1.65923944926162 1.87015642554852 1.58594008505691 1.46378354023329 0.196186646370523 0.197457300943953 0.201245053132060 0.201519752691601 0.199637854020820 0.197912277312086 0.195182543358624 0.195182543358624 0.207981285256536 0.197723550253855 0.200492062050882 0.196805595454057 0.199908899458678 0.197058245103398 0.202276222944106 0.204845148958087 0.195621987984055 0.196935443785879 0.202865146168051 5 5 - 20969875 20970243 20970047.091 20969668 20970619 - gene protein_coding_gene TRUE TRUE AT5G51580.1 unknown protein 0.229201680127748 2.18212526079142 0.0526132994791173 1 2.01634733482516 3.01834999796053 0.229201680127748 0.11194576615837 AT5G58860_at 1.05767103047814 0.644686180401667 0.600398122507258 0.435366350992919 0.482299825085238 0.458095065305042 0.154169961250578 0.400193606206465 0.566992432082425 0.814303868552864 0.763949797633581 0.217998002790433 0.447229878171027 0.566651596492149 0.179098047846240 0.772050507737857 0.151468052697834 0.438023643164171 0.697872393141405 0.211746727310755 0.219721797154974 0.213433382879544 0.217460144205887 0.21499593356325 0.216406957025440 0.211746727310755 0.214766309910041 0.221118676527979 0.22006612728257 0.217020433125492 0.215148470906318 0.219121960881675 0.217649473758105 0.212680168762545 0.214937764266093 0.221951578031024 0.218606476707788 0.211775072005291 5 5|0 -|/ 23783275 23784257 23783600.2 23783040 23785275 - gene protein_coding_gene TRUE TRUE AT5G58860.1 CYP86A1 (cytochrome P450, family 86, subfamily A, polypeptide 1); oxygen binding Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue. Identical to Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI) (P450-dependent fatty acid omega-hydroxylase) (CYP86A1) [Arabidopsis Thaliana] (GB:P48422;GB:Q9FIM3); similar to CYP86A8 (LACERATA), fatty acid (omega-1)-hydroxylase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT2G45970.1); similar to CYP86A7 (cytochrome P450, family 86, subfamily A, polypeptide 7), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G63710.1); similar to CYP86A2 (ABERRANT INDUCTION OF TYPE THREE GENES 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G00360.1); similar to cytochrome P450 monooxygenase CYP86A24 [Glycine max] (GB:ABC68403.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE91393.1); similar to Os01g0854800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044838.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.209593046240523 -2.18205235075255 0.0526199074886975 1 2.01623910882646 1.09666747881619 -0.209593046240523 0.0880549807111143 AT5G13800_at 9.69812997557604 9.41017055593946 10.6914720039993 10.5917284675118 10.7520186001379 10.5753422205353 9.44508628294682 9.06290056525894 9.17868861351009 9.19824609154534 9.6998816895489 8.9573109222658 9.82519958900163 9.77128518674568 9.09105491257896 10.0169342107860 10.0549463339595 9.60607260443664 8.80625176864348 0.117805282388818 0.118840815253853 0.116759702816460 0.117422224862346 0.124837939194774 0.126667280406676 0.117979155290286 0.121398273139394 0.122853229517346 0.125520265948541 0.116595470235003 0.124203754454623 0.117323861122553 0.121433219858641 0.123768083871407 0.120009229492701 0.11939992153932 0.127018821953092 0.1255618298541 5 5|0 -|/ 4452235 4452774 4452534.222 4451840 4454624 - gene protein_coding_gene TRUE TRUE AT5G13800.1|AT5G13800.2 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G36530.2); similar to Os06g0354700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057593.1); similar to hydrolase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35415.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.211030459392721 2.18201489551217 0.0526233024544385 1 2.01618351156905 19.3728050035207 0.211030459392721 0.0899467936323372 AT5G17520_at 8.74064067970293 8.66017311430773 9.15220739727855 9.01778149048957 9.56507436250443 9.29293187108985 9.11755088996388 9.14629846651192 7.69378907342394 8.640990170811 9.93044492234333 9.71597038305171 9.88251550322285 9.70596190344502 9.77860338035978 9.82647905598649 9.59924184450989 9.5871797316579 8.19475489442855 0.126324969483296 0.121247958020903 0.125710020447975 0.124669319482805 0.123235481672936 0.130771327602985 0.122728743883763 0.121805841563422 0.154755707799312 0.127977497273278 0.121937339776407 0.121247958020903 0.121247958020903 0.129539082731287 0.127473041399630 0.121247958020903 0.137875240733401 0.127781058078080 0.141700395511898 5 5|0 -|/ 5772823 5774308 5773529.556 5772585 5775347 - gene protein_coding_gene TRUE TRUE AT5G17520.1 RCP1 (ROOT CAP 1) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. Identical to Maltose excess protein 1, chloroplast precursor (Root cap protein 1) (MEX1) [Arabidopsis Thaliana] (GB:Q9LF50;GB:Q9SPJ2;GB:Q9SPJ3); similar to maltose transporter [Malus x domestica] (GB:ABG47411.1) 0.187792054781663 2.17998549965177 0.0528075615447361 1 2.01317160108399 18.0514877690444 0.187792054781663 0.0545694103896458 AT5G38460_at 2.42907188208305 2.96645987959466 3.23224289645127 3.36645988129259 3.90482346103766 3.7247409032061 3.22355252185249 3.23256548803605 2.76934161077203 2.46606911082807 3.62321295319594 3.79838312541911 3.50144396065992 3.15902980746842 3.67569096809169 3.70069225120476 3.48773571739242 3.29031005672695 2.86716862030498 0.239371914960015 0.239371914960015 0.251700987304648 0.267866755254101 0.245627173640281 0.250382155002781 0.246965659269966 0.245201981534147 0.251752908852715 0.246003155494697 0.240741305342413 0.243706127135977 0.239886041882932 0.248929418092352 0.239371914960015 0.239371914960015 0.252061479488333 0.241688539520777 0.244701741046287 5 5 - 15415845 15416462 15416176.182 15415514 15418256 - gene protein_coding_gene TRUE TRUE AT5G38460.1 ALG6, ALG8 glycosyltransferase family protein Identical to Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3- glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP- dolichyl glucosyltransferase) [Arabidopsis Thaliana] (GB:Q9FF17); similar to ALG6, ALG8 glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT2G44660.1); similar to putative alpha 3 glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAC79743.1); contains InterPro domain ALG6, ALG8 glycosyltransferase; (InterPro:IPR004856) 0.219246691011024 2.17765193039748 0.0530202004792236 1 2.00970935956779 6.3752006820217 0.219246691011024 0.100805050238358 AT5G37870_at 1.56687450518488 1.79700109852046 1.88228268263917 2.17488604826630 1.89652853366132 1.81041141947633 1.44649118483803 1.99810112990170 2.02781070353968 1.71032096927946 1.41347630454265 1.43227847139658 1.59188266922873 1.78131123888765 1.24748818213385 1.21956799399967 1.52495373079214 2.06249157958486 2.14792848114213 0.189102191713580 0.190449426132798 0.193309518187359 0.194075234518189 0.188069850902569 0.186891057745636 0.195997899397367 0.188754399220256 0.195473349182435 0.193816851968749 0.190673768291478 0.186641270789537 0.188826474252280 0.188931076367499 0.194433892744931 0.192011445551814 0.191066704170431 0.189245059357098 0.188990532574166 5 5 - 15091056 15091569 15091307.636 15090994 15092081 - gene protein_coding_gene TRUE TRUE AT5G37870.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G37910.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.232381750564343 -2.17715230827511 0.0530658331778534 1 2.00896824042242 3.56967273663162 -0.232381750564343 0.116122731352643 AT5G27160_at 2.07470602964302 1.49046369681575 2.47935836951468 2.06227220188318 1.81544786155087 1.30528575395302 2.06581677871704 1.80432940221184 2.09614221371843 2.45313628793665 1.86473265063284 1.75044151868705 1.95919150954017 2.19768643098080 1.85853961752821 1.91140735403545 1.91703231822785 2.03196959628056 2.08066585705862 0.166697102449045 0.166697102449045 0.171614895293014 0.166697102449045 0.171553852336231 0.179959113558685 0.170149770647027 0.170508955947947 0.172031302354044 0.17209485239119 0.168229831761739 0.172854457983346 0.166802521588826 0.173528377264446 0.170885087187606 0.166798521980617 0.168691654218715 0.173757623209959 0.168682029200370 5 5|0 +|/ 9565242 9565820 9565512 9562599 9565844 + gene protein_coding_gene TRUE TRUE AT5G27160.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G07520.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001067658.1); contains InterPro domain Protein of unknown function DUF287; (InterPro:IPR005048) -0.273975769229668 -2.17621290149733 0.0531517350137233 1 2.00757491008050 3.96038830048302 -0.273975769229668 0.158978849862373 AT5G10480_at 7.7076397123846 7.9426218436407 8.14428028581414 7.99039140622412 8.72456666827503 8.77358888474012 8.62612832803082 9.1525069126799 9.07723783270593 8.3458493339961 10.1874907424096 10.2194466283750 9.74287507892134 9.7415726844355 10.1396326767330 9.45927642568584 8.4616650393998 9.93171603801197 8.44028094461172 0.151979663963699 0.139262181420353 0.147799801252979 0.148367772188935 0.135394273321778 0.138773803181647 0.136546331526013 0.140159128114935 0.143704042872705 0.147312883405999 0.132348815503729 0.133510618906526 0.137471029292387 0.14277515211301 0.136395221790429 0.132348815503729 0.158341741092611 0.132348815503729 0.140731650634782 5 5|0 -|/ 3297976 3299387 3298821.125 3297805 3300152 - gene protein_coding_gene TRUE TRUE AT5G10480.1|AT5G10480.2 PAS2 (PASTICCINO 2) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59770.1); similar to Os01g0150200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042032.1); similar to protein tyrosine phosphatase [Hyacinthus orientalis] (GB:AAT08740.1); similar to Os04g0271200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052344.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59770.1); similar to Os01g0150200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042032.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); similar to Os04g0271200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052344.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482) -0.221340794306190 -2.17541210290622 0.0532250670627658 1 2.00638731595546 17.5610065642326 -0.221340794306190 0.103598330222874 AT5G37630_at 2.79883031829713 2.6245735711291 3.53777226027817 3.58951904823623 3.21913789308204 3.28644763640732 2.93979928852113 2.86344547477159 2.72207141996702 3.37629260587381 3.83005237507894 4.10162607737583 3.67455628201809 3.62572351736781 4.30038169713287 3.70099379630282 3.71988130323748 3.93746756891546 3.07700552699543 0.235291947087037 0.246057283907293 0.238304623177165 0.240627413227869 0.239481150764193 0.233071704072963 0.237582290528501 0.241109083609514 0.243420992624339 0.239403538135181 0.233071704072963 0.239074637177944 0.233071704072963 0.246625343507306 0.246257090149258 0.236374750344366 0.254768252342056 0.236142322220516 0.23825398664906 5 5 + 14969114 14969654 14969422.9 14964560 14969995 + gene protein_coding_gene TRUE TRUE AT5G37630.1 EMB2656 (EMBRYO DEFECTIVE 2656); binding similar to Os06g0256000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057312.1); similar to chromosome condensation protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46299.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.179177288686684 2.17502027339153 0.0532609835384738 1 2.00580627909238 6.56733660873571 0.179177288686684 0.0360534173935363 AT5G26940_at 6.09953249757383 6.05442989292044 7.02400517905221 6.13234502431992 8.03490133810351 7.72158234264257 6.23211244864538 6.43769804326282 5.89074337087709 5.38530920268589 6.75464028134768 6.38079918601976 6.19628704804684 6.31223755591548 5.7894847108926 5.79174867123171 5.80188796024482 5.80454128712971 5.53382308421564 0.264417711752524 0.264981463714499 0.258129553444065 0.279732888734226 0.266743173536044 0.258363101583966 0.270342775695819 0.258129553444065 0.26681237814215 0.263528337453315 0.258129553444065 0.258129553444065 0.265729538287746 0.261683294637153 0.271141471461830 0.272064988198172 0.279550241119748 0.258625060186796 0.261102206012567 5 5 + 9481848 9482611 9482263.727 9480576 9482793 + gene protein_coding_gene TRUE TRUE AT5G26940.1|AT5G26940.2|AT5G26940.3|AT5G26940.4 exonuclease family protein similar to ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL55462.1); similar to Os03g0301400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049864.1); similar to OSJNBa0053K19.7 [Oryza sativa (japonica cultivar-group)] (GB:CAE03499.2); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) -0.282640294135069 -2.17356143657038 0.0533949093972582 1 2.00364329221943 12.5706984575800 -0.282640294135069 0.167561808561281 AT5G53370_at 10.6496055618436 10.7121869511147 11.8430371414486 11.8169644434736 11.2908716871099 11.1820895998929 10.4050152236060 10.2888754392523 10.5421336069719 10.4250447832743 11.0796867651297 10.8355803796840 10.9819624533103 11.0955738493163 10.3214745013409 11.1235370646641 11.1018922214928 11.1600369886984 10.3703790033973 0.093725645599333 0.0861174141378792 0.0880274585298405 0.0887806299605272 0.0881059481725219 0.08664684147564 0.087131860943855 0.0880947049402466 0.0974741838356747 0.0901750495682611 0.0861174141378792 0.0861174141378792 0.0873849744812715 0.092458027209438 0.0896140158352368 0.0861174141378792 0.0932871477908434 0.0890454229574262 0.0892308308723043 5 5 - 21666909 21667459 21667192.545 21666758 21668819 - gene protein_coding_gene TRUE TRUE AT5G53370.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G49220.1); similar to pectinesterase inhibitor [Lycoris aurea] (GB:ABJ99595.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE82757.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE80825.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.176882488395692 2.17173194524039 0.0535633173033635 1 2.00093140398685 21.7277410022189 0.176882488395692 0.0299330585834701 AT5G54910_at 3.53648015804 3.59495105067877 4.17699018369428 4.31688734444208 4.12268504021435 3.84724890849580 3.93192605429297 3.7287852237183 2.91215779722203 3.15164958167581 3.52651724716406 3.77873772737752 3.25848279111753 3.22707082195919 3.45058507012583 3.76624863442859 3.27388150678515 3.31627940095484 2.97693388828820 0.21563910035684 0.211041501762348 0.210134437629217 0.204022526810172 0.201149038880321 0.210669611427309 0.205726949854677 0.208700679204234 0.209989393699878 0.208555526173035 0.207034686517876 0.201149038880321 0.211074491110989 0.209180072502985 0.201149038880321 0.201149038880321 0.214862216748045 0.206433780683923 0.210467595914227 5 5|0 -|/ 22315896 22316658 22316289.889 22315783 22318945 - gene protein_coding_gene TRUE TRUE AT5G54910.1 DEAD/DEAH box helicase, putative Identical to Probable DEAD-box ATP-dependent RNA helicase 32 (EC 3.6.1.-) (RH32) [Arabidopsis Thaliana] (GB:Q9FFT9); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT5G65900.1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAC83715.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -0.192675035708563 -2.17032116347388 0.0536935286253909 1 1.99884067964943 7.13864715663929 -0.192675035708563 0.0647791759114836 AT5G45320_at 1.17023196175397 1.26512222700966 1.64124212449167 1.21228752939688 1.33758660701314 1.26769328541272 1.63685120248511 1.33980766032005 1.03076313392700 1.12611629718822 1.82052660823871 1.87005923758261 1.94175032067738 1.50626397238371 1.85856810362120 1.70125301944368 1.40876324754722 1.84235046378495 1.26850232998663 0.183802666435414 0.189462095520355 0.183802666435414 0.187397002462263 0.188685344939965 0.188782634177887 0.184185025352327 0.195936284243274 0.192462625635739 0.193480369103435 0.188798280986893 0.187556605403305 0.197308942873341 0.183802666435414 0.188771138970152 0.186987769698649 0.19136129463592 0.191540061586821 0.191096914617653 5 5 - 18379582 18380246 18379952.727 18379338 18380395 - gene protein_coding_gene TRUE TRUE AT5G45320.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26350.1); similar to Os08g0163600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061066.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC99811.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.211750387978849 2.16859134813323 0.0538535985147552 1 1.9962777594022 2.80159572074901 0.211750387978849 0.0925682563278017 AT5G37490_at 1.44644619563610 1.39735796204465 1.65422309706059 1.75962455598199 1.57237161477111 1.31868766304672 1.64191310441971 1.64998268947927 1.54002257166157 1.74391782591601 1.49298926262634 1.16738352520235 1.59289894815543 1.48835422139876 1.02703127250989 0.998432074402028 1.19493114141964 1.26930096298956 1.17113975404994 0.219333085495359 0.224987124674668 0.222084873032502 0.217990926400750 0.221664591302105 0.220670908159239 0.217752806860063 0.218701074854629 0.236334657984022 0.219649282376788 0.234383044992580 0.217016210733257 0.225387046481524 0.223099745652783 0.221386511108458 0.217019349966371 0.226153144004912 0.21480871381533 0.223142501309226 5 5 + 14905685 14906114 14905859.182 14904708 14906381 + gene protein_coding_gene TRUE TRUE AT5G37490.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G66160.1); similar to syringolide-induced protein 13-1-1 [Glycine max] (GB:BAB86896.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) -0.183611790227931 -2.16728979723606 0.053974338929638 1 1.99434979869189 2.9370468069536 -0.183611790227931 0.0483128789207982 AT5G16650_at 9.29466054457757 9.10114534801915 10.0883708231455 9.88224151750356 10.3217027480644 10.1104441002812 10.0322029519363 9.82285484219411 9.29873545134535 9.47262138023038 9.85296941621101 9.85785809911711 9.82915293715417 9.97354113718454 9.42135228966738 10.0683187661703 10.1187304575858 9.8769212371926 9.49675948098378 0.0938822372666442 0.094383882039283 0.0929195048552413 0.095443991816213 0.0931836201920339 0.0911045382043841 0.0907024847842078 0.0932898936748836 0.10171724448407 0.0927631659841773 0.094209656221714 0.0906710702345721 0.0941739002065122 0.0945021147899031 0.100280798994221 0.0923151117673661 0.0906710702345721 0.0906846974114815 0.0950141926440496 5 0|5 /|- 5463579 5464692 5463987.8 5463180 5465332 - gene protein_coding_gene TRUE TRUE AT5G16650.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G33735.1); similar to Os02g0693200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047800.1); similar to DNAJ heat shock N-terminal domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19401.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.196098613463122 -2.16535089112910 0.0541546840214472 1 1.99147843386611 19.4804833494928 -0.196098613463122 0.0710144882606405 AT5G43160_at 2.70195271537884 2.68230917574677 2.97996733961852 2.74398804930921 2.94148743771885 2.93072333980946 2.8337301147653 2.73398387419228 2.84417421624066 2.45873756210804 2.70391010217843 3.34666081946357 3.12534047460018 2.83988212418684 3.23358120991711 2.73188019032776 2.56940699641149 3.10532110668863 2.87989227391602 0.212658890336811 0.210819704069998 0.213566972922420 0.207539449985579 0.206249390301428 0.218571543789689 0.209271552885253 0.213481698661071 0.213303118850674 0.206249390301428 0.208389782113234 0.207814160825868 0.207743478623295 0.206249390301428 0.209042903656538 0.209366667877252 0.207643419524175 0.206249390301428 0.209613496181371 5 5 + 17346417 17347867 17347437.909 17345679 17347923 + gene protein_coding_gene TRUE TRUE AT5G43160.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19570.2); similar to Protein of unknown function DUF566 [Medicago truncatula] (GB:ABE79541.1); contains InterPro domain Protein of unknown function DUF566; (InterPro:IPR007573) -0.181687887668875 -2.16482684525833 0.0542035262051978 1 1.99070250736810 5.66081737018073 -0.181687887668875 0.0445047584297167 AT5G03740_at 6.82451553122502 6.88540414090668 7.74429949621718 7.45964781613365 7.63797976181603 7.72454889348237 6.57984705389405 7.1817309773218 6.46484041183056 6.55434369365748 7.3348433211873 7.34805713717363 7.44922487427132 7.32971156356332 7.60411466284063 7.45118880324289 7.05030731031553 7.23500853181556 6.58331960880785 0.191699924546925 0.173806507187623 0.185918382132356 0.180181815247591 0.170848390756535 0.183714550079221 0.179102609269196 0.180897406197608 0.18021916270207 0.179063011572719 0.175172279590058 0.170721494279243 0.181951579195498 0.184021175157308 0.173400621833292 0.178108731397837 0.190890985761741 0.170117452984410 0.171197608211579 5 5 + 983570 983936 983796.111 981875 984199 + gene protein_coding_gene TRUE TRUE AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); nucleic acid binding / zinc ion binding HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression Identical to Histone deacetylase 2c (HD-tuins protein 3) (HD2C) [Arabidopsis Thaliana] (GB:Q9LZR5;GB:Q9M4T4); similar to HD2A (HISTONE DEACETYLASE 2A), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G44750.1); similar to putative histone deacetylase HD2 [Oryza sativa (japonica cultivar-group)] (GB:AAU10714.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.231336994346759 -2.16282544340715 0.0543904483217342 1 1.98773970284108 14.1969841740329 -0.231336994346759 0.116666630726389 AT5G41800_at 4.37403778658168 4.44341969726936 4.50079917831240 4.66946332785484 6.05901865179262 6.31305299979602 3.55037812657484 3.99565558898097 4.27978319467936 4.47950878909134 5.99788109152562 5.19639635997797 5.01951250644855 5.78680888910389 5.2472223625455 4.71033124431148 5.2552746864637 4.99650323961115 4.31160790867134 0.219061304384699 0.220198518590705 0.216123129868004 0.224874779277628 0.237591684020112 0.246689786107376 0.224676736603189 0.229582782490166 0.225324995967309 0.229461025619674 0.224685451786593 0.217246855468699 0.219382711710273 0.218313392217442 0.225351935336961 0.216127104484053 0.237113077747743 0.224534732654803 0.219536598940324 5 5|0 +|/ 16752471 16753039 16752804.8 16751001 16753219 + gene protein_coding_gene TRUE TRUE AT5G41800.1 amino acid transporter family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08230.2); similar to Os05g0586500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056462.1); similar to Os01g0621200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043602.1); similar to hypothetical protein [Cicer arietinum] (GB:CAA06244.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.212361424036104 2.16212560328968 0.0544559553639403 1 1.98670389538348 9.5548321338016 0.212361424036104 0.0941625575756083 AT5G58580_at 3.2805091548444 3.47576984770875 3.05079781014535 3.23164367594193 3.4283948951976 3.35497654121072 2.88799675740066 3.08283194151714 2.22524782243513 3.29581887927474 3.25095898261812 4.2228977083879 3.0497970498581 3.39568879370891 3.83338529240027 3.40698276561215 3.33813309889649 2.99150635843257 3.19832381198184 0.182943464306943 0.186068266229638 0.190259409670181 0.188425119074114 0.189266876364644 0.187176060892556 0.193957609716910 0.19084792512567 0.199208101395361 0.189584107938762 0.187967221646145 0.187194373954378 0.195430302508842 0.195433454049243 0.195245315283776 0.184255455869526 0.196905227187425 0.186769386579008 0.190945057238629 5 5 - 23694144 23694697 23694405.364 23694132 23695058 - gene protein_coding_gene TRUE TRUE AT5G58580.1 ATL63; protein binding / zinc ion binding Identical to RING-H2 finger protein ATL5O (ATL5O) [Arabidopsis Thaliana] (GB:Q9LUZ9;GB:Q4PSB0); similar to ATL2 (Arabidopsis T?xicos en Levadura 2), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G16720.1); similar to Avr9/Cf-9 rapidly elicited protein 132 [Nicotiana tabacum] (GB:AAG43550.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.188150278899298 -2.15997617915448 0.0546576186717261 1 1.98352329802509 6.39543120839743 -0.188150278899298 0.0584768504720117 AT5G49050_at 1.59994782287580 1.48499508383768 1.79228145261168 1.76631834429220 1.35008137630066 1.69495177568834 1.68531846166528 1.40363074985540 1.98577586044752 2.07039972070133 1.75990723827155 1.82764604185586 1.65952936730605 1.81873766503579 1.71253326289837 1.80458270008457 1.88670610428249 2.29096097599806 2.18523608284793 0.180706127221241 0.181455366378088 0.183038640778494 0.184394555876118 0.176925683427135 0.177280078908382 0.179971398918251 0.181566277020336 0.184577826315093 0.182070666145369 0.178718873747961 0.176925683427135 0.178739549930184 0.180378939735980 0.178034360003769 0.180669259155808 0.182217403379654 0.183898473499247 0.181227844308687 5 5 + 19901156 19901581 19901379.545 19901155 19901607 + gene protein_coding_gene TRUE TRUE AT5G49050.1 similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT2G47710.1); similar to fiber protein Fb19 [Gossypium barbadense] (GB:AAR07598.1); contains domain no description (G3D.3.40.50.1420); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) -0.201236485347304 -2.15783954587284 0.0548587879888373 1 1.98036265613986 3.55996362045697 -0.201236485347304 0.0797126252464164 AT5G64790_at 1.86830655300265 1.66345166204541 2.42595716195201 2.01531891092104 1.81992196211807 1.24864777957087 1.93101567400077 1.74179016420097 2.18069247290916 2.37468879839247 2.03409360369811 1.59989369283529 1.97871246569847 2.01324963810977 2.13118937523589 1.99496861988645 1.83588058842722 2.4032259877732 2.14172753773325 0.232607082416183 0.237724049446903 0.239702781044096 0.233316749878425 0.230253322504018 0.231283964416241 0.230253322504018 0.240327050384787 0.23550673686754 0.230253322504018 0.230253322504018 0.234990851908009 0.231861590276047 0.235271641612966 0.240953403012423 0.231319513354235 0.237159023962184 0.233063285415014 0.230253322504018 5 5 + 25921249 25921736 25921496.273 25919867 25921927 + gene protein_coding_gene TRUE TRUE AT5G64790.1 glycosyl hydrolase family 17 protein similar to hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G64760.2); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT3G04010.1); similar to 80C09_11 [Brassica rapa subsp. pekinensis] (GB:AAZ41822.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.243701388412309 -2.15577050827625 0.0550542659951875 1 1.97730298657689 3.95493690821131 -0.243701388412309 0.130968174855301 AT5G46760_at 8.07061471750605 8.34892992398557 8.96466083751604 9.21282271342645 9.43748780600738 8.8929343109702 7.81563520619907 7.43110558673343 6.72245042540631 7.30332766712238 8.29434423549936 8.23406293406612 8.28727610254712 8.51423026199393 7.50635804471274 8.39605701336414 8.52214361542928 7.52141004216189 7.17733679806125 0.191721645009767 0.188274833598838 0.192647728847972 0.189047014707831 0.194638266255149 0.189196811510210 0.193026810446599 0.195235610054551 0.220256121344300 0.198167858361649 0.196269794577282 0.193157871017216 0.185059622670367 0.190240619652486 0.205390289378212 0.188839275078250 0.188047664542153 0.190686109205129 0.191426729592441 5 5 + 18992684 18993184 18992911.545 18991458 18993236 + gene protein_coding_gene TRUE TRUE AT5G46760.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G17880.1); similar to basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] (GB:ABD65632.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.244845208373846 2.155699815627 0.0550609566003565 1 1.97719846416673 16.1353690101689 0.244845208373846 0.132185356485697 AT5G05670_at 5.74345612815689 5.28648221010057 5.77085265361100 5.82559691254331 6.18627601883779 6.36627213383034 5.19743047797199 5.32335445210904 5.24441932387778 5.25274973173975 6.0229506828023 6.35796236020665 5.89982182809216 5.9199867668235 6.27136835235977 5.88414529821214 5.56251402140801 5.92911144505857 4.66922399481165 0.185422574392855 0.176061837340474 0.181843720405989 0.175980526293235 0.180912052216043 0.187826790821803 0.191894932904136 0.181603625516482 0.179931070133608 0.191081735527355 0.179168612652135 0.181694400494227 0.179348802096628 0.187757337955136 0.175096062187614 0.175096062187614 0.187717737801275 0.186288502306648 0.188736634869281 5 0|5 /|- 1695973 1696765 1696366.3 1695731 1698154 - gene protein_coding_gene TRUE TRUE AT5G05670.1|AT5G05670.2 signal recognition particle binding| similar to signal recognition particle binding [Arabidopsis thaliana] (TAIR:AT2G18770.1); similar to AAA ATPase; Small GTP-binding protein domain [Medicago truncatula] (GB:ABE88783.1); contains domain SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT RELATED (PTHR19326:SF4); contains domain FAMILY NOT NAMED (PTHR19326); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) -0.207184677832892 -2.15542959767583 0.0550865381415333 1 1.97679894462311 11.2306885956518 -0.207184677832892 0.0882540686025614 AT5G40190_at 7.42750298945765 7.98907638549387 8.16700058634103 8.52180575855563 8.8253353478713 8.56446373898512 6.97068187781013 7.36013919311845 7.2132428581736 6.95286600284807 8.6847393192186 8.48787644543086 8.6341346393357 8.49376725583399 8.44451163203613 8.66986465419022 7.86789182484822 8.17181565509946 7.25436787757041 0.226741771123949 0.216543067946591 0.221688000296572 0.217137010691057 0.214032396722758 0.239354008502954 0.224544899451154 0.215446635457296 0.236149861409367 0.23840746393974 0.211331214859061 0.216138448788228 0.221462039664001 0.221309017424445 0.224705900888779 0.219448935587425 0.223193815478557 0.22004835749711 0.235057101605997 5 5 - 16086539 16086950 16086732.636 16086407 16087176 - gene protein_coding_gene TRUE TRUE AT5G40190.1 calmodulin-binding protein Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT3G28140.1); similar to calmodulin-binding protein [Clostridium thermocellum ATCC 27405] (GB:ZP_00504052.1); similar to Os09g0375400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063037.1); contains InterPro domain Appr>p cyclic nucleotide phosphodiesterase; (InterPro:IPR009097) 0.252723134499563 2.15301219161929 0.0553158988406106 1 1.97322552514459 15.7642427802607 0.252723134499563 0.140694866353158 AT5G56940_at 8.07856945312339 8.10485780255733 8.82484598761723 9.04993874729675 9.00997626525373 8.73528516465533 7.6833818800488 7.8823215422582 7.12310471769973 6.95902378334694 8.22200987330995 8.41903103403352 8.1505529271617 7.93887400137955 8.93311368839635 8.32103364532975 8.09783890663888 8.27889336594025 7.08290515148272 0.177135077505087 0.173663843729763 0.189261741845178 0.174603597036761 0.181175989234019 0.181365226397537 0.176706362148144 0.177623622123095 0.192013212927276 0.185854835802152 0.178663360617931 0.173663843729763 0.174228467321287 0.180401734611655 0.176892314873371 0.178884259970617 0.183297511012039 0.180446607991566 0.180062791731511 5 5|0 +|/ 23048106 23049373 23048862.9 23048012 23049637 + gene protein_coding_gene TRUE TRUE AT5G56940.1 ribosomal protein S16 family protein similar to SSR16 (ribosomal protein S16), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT4G34620.1); similar to Ribosomal protein S16 [Medicago truncatula] (GB:ABE93061.1); similar to Os09g0498100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063564.1); similar to Os08g0517900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062247.1); contains InterPro domain Ribosomal protein S16; (InterPro:IPR000307) 0.194576035967045 2.15151674314736 0.0554582408296121 1 1.97101561150694 16.0962369292431 0.194576035967045 0.0705906111672463 AT5G59980_at 3.323604377038 3.3934894434762 4.38665655807887 3.73741772205394 3.54566976541751 3.6364604742762 3.20779570555674 3.5382847494094 3.06358723583177 3.36006211375812 3.23991715500942 3.20453885168132 3.20923957779504 2.85053839662413 3.44664559297570 3.39963869849048 3.45046666983664 3.81615937802868 2.97866107887211 0.279334290113537 0.28672006975716 0.292874488245081 0.293374820772235 0.272365453165556 0.290177786409273 0.264850749280500 0.31021454385916 0.281203889715481 0.278895333494893 0.264850749280500 0.269744752490806 0.264850749280500 0.272955643406707 0.27761765697098 0.268213529102919 0.277463929621239 0.264850749280500 0.277570090612957 5 5 + 24166295 24166741 24166446.286 24164433 24166953 + gene protein_coding_gene TRUE TRUE AT5G59980.1 RNase P subunit p30 family protein similar to RNase P subunit p30 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95564.1); similar to Os12g0175900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066293.1); similar to RNase P subunit p30 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22323.1); contains InterPro domain RNase P subunit p30; (InterPro:IPR002738) -0.239850138618502 -2.14938565820977 0.0556616883708439 1 1.96786726029238 6.82679560751795 -0.239850138618502 0.127622499575688 AT5G45420_at 6.25819021069563 6.26324869615709 7.3365488231918 7.3963306194196 7.13329816308948 7.20016706579154 6.88232123698451 6.98782008511104 6.09960848699694 5.94275833614306 7.06716672368727 7.32504493122653 7.0450935231522 7.16463076584447 7.04106460792853 6.95468378740835 6.89034628160109 7.0466567970929 5.94547848300174 0.179013027227113 0.180838857256514 0.183878678346550 0.189767693370024 0.190897812835366 0.188139770382286 0.18469987467952 0.186407017199724 0.208033900069937 0.191046741825569 0.182124999734552 0.179957986387898 0.186510191892552 0.185936587030371 0.186631616536023 0.176882510663718 0.184411662541425 0.179177987221752 0.197546935411889 5 5 - 18422899 18423433 18423204.727 18421296 18423833 - gene protein_coding_gene TRUE TRUE AT5G45420.1 myb family transcription factor similar to DNAJ heat shock N-terminal domain-containing protein / cell division protein-related [Arabidopsis thaliana] (TAIR:AT3G11450.1); similar to Os08g0159000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061040.1); similar to gonidia forming protein GlsA [Lilium lon (GB:BAC77346.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.173215455432004 -2.14642936307044 0.0559450940779586 1 1.96350150714932 13.4636327938667 -0.173215455432004 0.0239797249542162 AT5G04390_at 1.39351944823678 1.25398268064140 1.63740040373751 1.92432659229825 1.45071071019635 1.59354129508674 1.10147102040735 1.13241090406538 1.22110996363324 1.16966119487532 1.29172729073838 1.61477640995682 1.08415136211510 1.87660026008712 0.922011847678989 1.17827463433265 1.32950457280299 1.57502104680494 1.30108697000483 0.187021439531911 0.189340757713901 0.199017440972409 0.189882491188489 0.192198646503346 0.19623763320839 0.188100436535421 0.189902534451517 0.187954212282546 0.196186490511814 0.19870765182501 0.193572896778355 0.187209333862771 0.194301813873955 0.187308717817304 0.186100663930456 0.186372498808629 0.196823826993368 0.186240075306060 5 5 + 1239664 1240220 1239936.727 1239101 1240518 + gene protein_coding_gene TRUE TRUE AT5G04390.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G10470.1); similar to DNA-binding protein [Petunia x hybrida] (GB:CAA43111.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.187986412631765 2.14379316403607 0.0561989729098333 1 1.95961015357823 2.73073428395159 0.187986412631765 0.0607308460695339 AT5G04520_at 5.09051173053365 4.88857523239584 6.09376232757356 6.03671037750381 6.45917013808942 5.38543805619638 4.09939477790654 4.24841723558585 3.56968347321714 3.83938074559932 4.52319834362646 4.33156981075377 5.11048594749777 4.63119887816614 4.20038243988601 5.07006402508743 4.51061636201105 4.64032315262947 3.57841036458192 0.25468134931189 0.259353433882907 0.264999846380782 0.256610245882901 0.269320887637522 0.261900931561333 0.256790088077215 0.259736194750756 0.263933978496994 0.25468134931189 0.25468134931189 0.25468134931189 0.255624800441652 0.257182645537243 0.255430799836827 0.25468134931189 0.273356640708141 0.266274253933521 0.256748780640158 5 5|0 -|/ 1290028 1290571 1290376.3 1290013 1291064 - gene protein_coding_gene TRUE TRUE AT5G04520.1 oxidoreductase/ transition metal ion binding similar to oxidoreductase/ transition metal ion binding [Arabidopsis thaliana] (TAIR:AT1G06240.1); similar to Si:xx-184l24.3 protein [Danio rerio] (GB:AAH96959.1); similar to Os03g0363200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050162.1); contains InterPro domain Protein of unknown function UCP012318; (InterPro:IPR011197); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078); contains InterPro domain Protein of unknown function DUF455; (InterPro:IPR007402) 0.30385222478409 2.14333797563228 0.0562429207397031 1 1.95893840169993 9.4326081833515 0.30385222478409 0.191077862585409 AT5G05540_at 5.09303777437543 4.84519472267572 6.05267905080209 5.94056718153559 7.2676138302243 6.66818966257506 4.68364759795881 3.66236116758985 4.2033687180923 4.38778682499431 4.74926116120556 4.79510828818953 5.12859189497695 4.50457426025384 5.42616121278786 5.0763953758474 5.42252119831005 5.05316559583899 4.59600459352076 0.245057339922658 0.243048432942873 0.250764110651940 0.250356995103226 0.252852568564425 0.256427555632165 0.241264772332542 0.252354951136118 0.241264772332542 0.241264772332542 0.242442118371266 0.244866027954178 0.241615895641352 0.246666586871311 0.243340217127939 0.243070708549497 0.250236838815266 0.241326264738009 0.241264772332542 5 5|0 +|/ 1637959 1638703 1638302.667 1636299 1638940 + gene protein_coding_gene TRUE TRUE AT5G05540.1 exonuclease family protein similar to exonuclease [Arabidopsis thaliana] (TAIR:AT5G67240.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) 0.324985026439498 2.14245255933253 0.0563285002793581 1 1.95763187087761 10.2342575829481 0.324985026439498 0.210268933600064 AT5G62330_at 1.18228883405235 1.24770650330077 1.20933949321764 1.15598356341098 0.97537848087673 1.31452543841004 1.01216345085785 1.16998183411534 1.39316054719653 1.51631508987117 1.52224450445329 1.06147922326338 1.34060699812750 1.07573265770250 1.39376391238833 1.15214222677494 1.33235268235869 1.03990266251362 1.49254693615189 0.210347057887113 0.211886150789460 0.214274911631061 0.206713125330836 0.209823985846686 0.216081307543780 0.213602135835613 0.219113143656678 0.207011176236906 0.210944490254396 0.217493788172019 0.212373381944327 0.217129057260632 0.207471643631226 0.208829682769032 0.206709367631775 0.218447352033973 0.209931382573224 0.216941375304686 5 5 + 25048900 25049359 25049131.273 25048827 25049430 + gene protein_coding_gene TRUE TRUE AT5G62330.1 similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT5G62340.1) -0.191133861606069 -2.14232074162148 0.0563412516665782 1 1.95743737458974 2.51198043287404 -0.191133861606069 0.0663622617509558 AT5G16880_at 9.76012720248403 9.86697015796385 10.6738091724426 10.6828729418291 10.7329718856979 10.6036407835402 9.08862322136766 9.27969795625785 9.70067465879542 9.32170734206403 10.1086793162761 9.96632696777475 9.93191434999153 9.93936310349724 9.77885465942685 10.1063841442405 9.95777978284834 10.0698771875476 9.31877806145317 0.0938328438041578 0.0896530815465122 0.0921330797119397 0.0910248288593331 0.0946677000714654 0.0914450744795043 0.092892533099671 0.0977587131394612 0.102238124975558 0.0942288169508002 0.0917422228971928 0.0896530815465122 0.094421303782006 0.0983506698428203 0.0929070147496742 0.0896530815465122 0.0964058713004193 0.0952715384025403 0.0953820163742566 5 5 + 5550585 5551253 5550955.636 5548917 5551466 + gene protein_coding_gene TRUE TRUE AT5G16880.1|AT5G16880.2|AT5G16880.3 VHS domain-containing protein / GAT domain-containing protein similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G06210.1); similar to Os02g0697300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047818.1); similar to hepatocyte growth factor-regulated tyrosine kinase substrate-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAL58181.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain VHS; (InterPro:IPR002014); contains InterPro domain ENTH/VHS; (InterPro:IPR008942) 0.179591829309805 2.14227002465760 0.0563461585047771 1 1.95736254306645 19.8008145617252 0.179591829309805 0.0440299690647339 AT5G60240_at 2.45461227329113 2.28409634497502 2.57227600067624 2.51721855508319 2.16055719440391 2.46014881516954 2.63449505882278 2.32091724409559 2.40674353421305 2.32301707861498 2.45800483262421 2.58712619342222 2.47743678830172 2.52993585820203 2.50802115470142 2.13324668125528 2.75662622000831 2.65083698661526 2.44507240901058 0.191521863070283 0.191056419342618 0.187170515126083 0.198749881769934 0.193840248845561 0.204297927313906 0.185949586750874 0.199816259914093 0.196861866790906 0.195840234090288 0.199928492211453 0.189235727896803 0.188017975919223 0.195868136830436 0.198007383347087 0.186910143677741 0.199209263212241 0.194201329257336 0.189283599658763 5 5 + 24268610 24268824 24268731.727 24268608 24268854 + gene protein_coding_gene TRUE TRUE AT5G60240.1 unknown protein -0.200795395442952 -2.14195572680861 0.0563765757253374 1 1.95689881826705 4.87767285915009 -0.200795395442952 0.0812054633761212 AT5G01010_at 9.14819969252035 9.06946318588919 9.69541225080697 9.66151718363244 9.8600667168751 9.70387983004729 8.4435541849124 8.38587606523021 7.69497270162039 7.53659038519974 8.6808682543732 8.34424219627636 8.51554153406667 8.3857231789407 8.59060402400838 8.54316674975316 8.57270234975643 8.43098304679434 7.19079007844287 0.142932072143988 0.139755371384501 0.146535837988684 0.141773261057569 0.151445938643371 0.145483203176910 0.144116515350252 0.144266598978251 0.144391406691609 0.158905177365793 0.139705155956819 0.139705880372713 0.143025792659641 0.139390859769165 0.141482026152877 0.143924445844886 0.150011266816061 0.159638080211146 0.159074547325626 5 5|0 -|/ 3613 4624 4211.6 1279 4993 - gene protein_coding_gene TRUE TRUE AT5G01010.1 similar to emp24/gp25L/p24 [Medicago truncatula] (GB:ABE93045.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD; (InterPro:IPR009038) 0.175158410902120 2.14117266741442 0.0564524269347597 1 1.95574356757851 17.2370444579895 0.175158410902120 0.0324076554607712 AT5G47450_at 0.743055245121664 0.694309353544841 1.52162797254715 1.11880265217367 1.55724126545287 1.31790517875535 1.34356270622563 1.36298720767494 0.996039549962892 1.37477638948201 1.86566898657596 1.64816271148176 1.75968708021376 1.60291225692488 1.32104049773744 1.55915174524435 1.58166755350603 1.13118673872184 1.59884876960051 0.225719339086111 0.225017854550489 0.231487819671253 0.225641409394843 0.217764469550979 0.217423902960570 0.212712937379493 0.220236630433525 0.228264456607644 0.213682397912461 0.212712937379493 0.212712937379493 0.217430245238337 0.216567069807629 0.217835347784361 0.219021464944815 0.216886542789113 0.221592206160993 0.212712937379493 5 5 - 19265787 19266495 19266144.909 19265476 19266731 - gene protein_coding_gene TRUE TRUE AT5G47450.1 AtTIP2;3 (Arabidopsis thaliana tonoplast intrinsic protein 2;3); water channel Tonoplast intrinsic protein, transports ammonium (NH3) and methylammonium across the tonoplast membrane, gene expression shows diurnal regulation and is upregulated by ammonium (NH3). Identical to Aquaporin TIP2.3 (Tonoplast intrinsic protein 2.3) (TIP2.3) [Arabidopsis Thaliana] (GB:Q9FGL2;GB:Q53XE4); similar to DELTA-TIP2/TIP2,2 (tonoplast intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT4G17340.1); similar to tonoplast intrinsic protein, putative [Brassica oleracea] (GB:ABD65010.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) 0.200984197658848 2.14106127707343 0.0564632246755701 1 1.95557924449586 2.64838958067829 0.200984197658848 0.0815936635039806 AT5G49530_at 7.27153350989472 7.38693227996437 7.59382076198769 7.98746680402871 7.98249905864971 7.67880890348993 6.61673659736392 6.81630047298586 6.76027688276713 6.26459797484978 6.9663976447598 7.30055809680271 7.43897255726633 7.23856268727822 7.1950789105083 7.38880131402623 7.41989452252107 7.42650702876271 6.3604152277765 0.171717363784886 0.168159502163248 0.172501810717659 0.166941573387917 0.177868593193018 0.173806126648667 0.181805528409253 0.168620676650438 0.181082822839811 0.183032375574586 0.170759861754736 0.166947241826032 0.168469457302648 0.168924772456893 0.168558408410199 0.165660284736969 0.177792250527423 0.173668709456685 0.170879623125188 5 0|5 /|+ 20120928 20121268 20121075.5 20117805 20121673 + gene protein_coding_gene TRUE TRUE AT5G49530.1 SIN-like family protein similar to BAC19.10 [Lycopersicon esculentum] (GB:AAG01125.1); contains InterPro domain Sin-like protein conserved region; (InterPro:IPR006886) -0.210769534503311 -2.14057302662089 0.0565105769587469 1 1.95485901113103 14.2960672770649 -0.210769534503311 0.0948376715300573 AT5G19180_at 6.40321225815272 6.16148140660504 7.71372455256566 7.39113171256662 7.29419620606949 7.16557765410853 6.01066498717977 5.74074336708663 5.59348924356548 5.56934966910886 6.5743490856983 7.10480104977158 6.44749297243067 6.65841603809071 6.96641248596332 7.1567154282646 6.34541409175253 6.43983821460005 5.40342891625889 0.184794783595959 0.178482966701207 0.194533651840971 0.178585077036779 0.183376206388160 0.191584852641366 0.181166770926694 0.182343299075954 0.186855591354694 0.180622804553992 0.198337791393035 0.186638010709260 0.186901298445972 0.201957864742845 0.182481679113683 0.178603893037375 0.195483210778634 0.184904534207418 0.182610810244687 5 5|0 +|/ 6454656 6455708 6455217.9 6453278 6456016 + gene protein_coding_gene TRUE TRUE AT5G19180.1 ECR1 (E1 C-TERMINAL RELATED 1); small protein activating enzyme Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. Identical to NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-) (RUB- activating enzyme) (Ubiquitin-activating enzyme E1-like protein) (ECR1) [Arabidopsis Thaliana] (GB:O65041;GB:Q94A29); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to Os01g0271500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042708.1); similar to SMT3/SUMO-activating complex, catalytic component UBA2 (ISS) [Ostreococcus tauri] (GB:CAL53137.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain Ubiquitin-activating enzyme repeat; (InterPro:IPR000127); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594) 0.204705739044654 2.14039036456599 0.0565283018992050 1 1.95458957488451 12.8519761166081 0.204705739044654 0.0868555751061358 AT5G64905_at 0.615998435234259 1.16733964184461 1.73511771748263 1.52141511899887 0.999616203740456 0.904472981303926 0.693731439950685 0.502539623838465 0.470251348861291 0.528319631529839 0.786824858772226 0.840714259718206 0.814269012012921 0.824433966656484 0.760022561867087 0.585829073959203 0.93558443262864 0.931981694291797 1.36783003438617 0.210698040388374 0.208498658234948 0.219662107116493 0.210534274388798 0.212163826320772 0.208498658234948 0.208498658234948 0.210642156553982 0.218555527641744 0.211275405592425 0.208498658234948 0.212406485421572 0.211118159105361 0.212680007024225 0.21124291929364 0.212618127015841 0.223098715700257 0.218735327234028 0.208498658234948 5 5 + 25956884 25957105 25956963.273 25956800 25957285 + gene protein_coding_gene TRUE TRUE AT5G64905.1 PROPEP3 (Elicitor peptide 3 precursor) Identical to Elicitor peptide 3 precursor (PEP3) [Arabidopsis Thaliana] (GB:Q8LAX3); similar to 80C09_18 [Brassica rapa subsp. pekinensis] (GB:AAZ41829.1) 0.222062922983619 2.13978832908984 0.0565867589775331 1 1.95370159534457 1.81690780567295 0.222062922983619 0.108797922933885 AT5G53890_at 5.54035675623049 6.35663217679926 6.23778220577576 7.00656514072357 7.72151134328069 7.57561824566392 5.67727247407208 5.75796340094683 4.93453110110907 5.52416484373929 6.85377813613556 6.69456171564812 6.46982330771763 6.5371308300817 6.46249821028942 7.30867400462976 7.12011936430872 6.90262847746411 5.71143086055807 0.208578536918311 0.214434889888741 0.205804568203091 0.209180259715365 0.211085669707405 0.206882898265107 0.205733652213271 0.207727135539460 0.214223002418913 0.207917579130102 0.206617966101064 0.208543783272364 0.207447918396791 0.204534724193796 0.215775265950228 0.204316728410340 0.214059884199991 0.204316728410340 0.211516071445345 5 5 + 21897034 21897536 21897256.364 21894087 21897687 + gene protein_coding_gene TRUE TRUE AT5G53890.1 leucine-rich repeat transmembrane protein kinase, putative similar to ATPSKR1 (PHYTOSULFOKIN RECEPTOR 1), ATP binding / peptide receptor/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G02220.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G72300.1); similar to putative phytosulfokine receptor [Oryza sativa (japonica cultivar-group)] (GB:BAC20742.1); similar to putative phytosulfokine receptor precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD23737.1); similar to Phytosulfokine receptor precursor (Phytosulfokine LRR receptor kinase) (GB:Q8LPB4); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.308796073763421 2.13882143678518 0.0566807637813781 1 1.95227564195871 12.5760597300632 0.308796073763421 0.196180844545666 AT5G53510_at 1.49172096688326 1.66166662276319 2.18538140808928 2.52654523068233 1.53349410855296 1.64349284342699 2.05212575274576 2.45083030549333 1.80705096708739 2.20751081734772 2.37337893066319 1.6952892717388 1.94256785360110 2.30490991852439 1.54048181240058 1.86582586954588 1.76494161766739 2.52739133399837 2.4203076511775 0.215777541519159 0.213233717070967 0.203198404367336 0.210394774694664 0.200848706540108 0.205714219845157 0.202704451056332 0.208065666938151 0.209407327855821 0.198977132354008 0.198977132354008 0.212178028683055 0.203955898620628 0.204354956570357 0.214891671337952 0.206330677821642 0.212693423917805 0.212237352087746 0.198977132354008 5 5 + 21758763 21759257 21759014.909 21756075 21759308 + gene protein_coding_gene TRUE TRUE AT5G53510.1 ATOPT9 (oligopeptide transporter 9); oligopeptide transporter oligopeptide transporter Identical to Probable oligopeptide transporter 9 (AtOPT9) (OPT9) [Arabidopsis Thaliana] (GB:Q9FJD2); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to ATOPT6 (oligopeptide transporter 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G27730.1); similar to isp4 protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB89477.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE92893.1); similar to Peptidase aspartic, active site; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE84685.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -0.212541383596239 -2.13866634880532 0.0566958558317336 1 1.95204694154151 4.01655955710714 -0.212541383596239 0.0973329525355217 AT5G24590_at 5.44200808048993 5.91712413383925 6.60088433242019 6.92614774762597 7.35636806842305 6.52816754694643 4.93480362771129 5.18582386075221 4.77336692727323 4.37308241056137 5.75663284769561 5.78293513841459 5.99585411040529 5.6520351794129 5.52411545258384 5.84867399189169 5.81845693769563 5.7911833095562 4.87141683050366 0.191443872525424 0.190089658469943 0.197904380603794 0.196165420309415 0.206122403678784 0.198751602763281 0.182961156974855 0.182961156974855 0.199351103594429 0.191495127874263 0.18993208176859 0.186535591947802 0.182961156974855 0.186917042115077 0.189238439958424 0.182961156974855 0.195436058610419 0.193700461779045 0.189967512173215 5 5 - 8416948 8417548 8417285.182 8416665 8418936 - gene protein_coding_gene TRUE TRUE AT5G24590.2 TIP (TCV-INTERACTING PROTEIN); transcription factor Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. similar to ANAC062 (Arabidopsis NAC domain containing protein 62), transcription factor [Arabidopsis thaliana] (TAIR:AT3G49530.1); similar to No apical meristem (NAM) protein [Medicago truncatula] (GB:ABE84505.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.291084961097179 2.13851233055489 0.0567108475699442 1 1.95181982413805 11.3333448883109 0.291084961097179 0.179881879413008 AT5G52810_at 7.6041866912378 8.12475404972242 9.7542340252948 10.0610114721931 7.19517723510638 7.40036467754657 6.59874210821237 6.69100035289553 6.93363501708099 6.940751460201 7.33395386225733 7.45396022055805 7.05013203811884 7.78211725824985 6.17710967663422 7.60689499950916 7.73371883703954 8.38237526559466 5.18745722593872 0.208251156446032 0.211290747157699 0.218200732637133 0.223880598623251 0.217298474679653 0.218463819601062 0.216649883135718 0.207486328727813 0.233144483200189 0.213160659390667 0.211347893490690 0.209781346364794 0.212599162196744 0.209453222798987 0.221273637936927 0.210741905635416 0.216743301506216 0.208042753640601 0.226044769878001 5 5 + 21417147 21417691 21417379.545 21416557 21417829 + gene protein_coding_gene TRUE TRUE AT5G52810.1 ornithine cyclodeaminase/mu-crystallin family protein similar to Aconitate hydratase, N-terminal; Ornithine cyclodeaminase/mu-crystallin [Medicago truncatula] (GB:ABE83064.1); contains InterPro domain Ornithine cyclodeaminase/mu-crystallin; (InterPro:IPR003462) 0.223971769115594 2.13533640089481 0.0570208268488947 1 1.94713778763348 14.8256741619355 0.223971769115594 0.111578830962284 AT5G59290_at 5.95041556994223 6.54355004775902 7.27220188064463 7.71291958437838 7.56061207876217 7.38252692819626 7.06544436088415 7.30860025500767 7.2008139674518 6.86632390115976 9.13688069957436 9.05961474754862 8.3647614774324 8.75477406134715 9.19813467915258 8.59128884884459 8.78826712581077 8.71477785156664 7.35896279999174 0.159214953184785 0.157593370512727 0.157768428657442 0.150816390951125 0.156487993561084 0.163215680324645 0.156656557512482 0.147131029020438 0.180861486531099 0.149903300677351 0.150885481548175 0.15062163146668 0.150881870375382 0.163608456281224 0.148450130009935 0.148561192106427 0.153400880172992 0.149214085609102 0.148647368277266 5 5|0 -|/ 23933047 23934047 23933486.4 23932756 23935418 - gene protein_coding_gene TRUE TRUE AT5G59290.1|AT5G59290.2 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE); catalytic|UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. similar to UXS5 (UDP-Xyl synthase 5), catalytic [Arabidopsis thaliana] (TAIR:AT3G46440.2); similar to UXS6 [Arabidopsis thaliana] (TAIR:AT2G28760.3); similar to UDP-glucuronic acid decarboxylase 3 [Populus tomentosa] (GB:AAX37336.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.247828280801973 2.13253468338892 0.0572956201528482 1 1.94300938254207 15.0835818345022 0.247828280801973 0.138105831040457 AT5G56730_at 5.32015990638656 5.28060348047105 5.9839975970667 5.83404457136792 6.49379797142209 6.29089177692963 5.35982193911264 5.05649223537645 5.22232652536435 4.49425029985564 5.36485869099904 6.05267489860023 5.61664054399061 5.61652717743678 5.56339507195463 5.40259159934984 4.96694418739352 5.06355567566428 4.64041128240466 0.184860059458723 0.186686226547795 0.183686410223414 0.195784226562425 0.190693599275068 0.183552743264724 0.188282808203969 0.186161438450315 0.211903667396150 0.187129554845545 0.184073579337945 0.181484037033005 0.189265948190018 0.192600779449286 0.191119721757277 0.181484037033005 0.217937169011198 0.18611923793753 0.182916199861759 5 5 - 22964134 22965142 22964528.909 22964132 22969802 - gene protein_coding_gene TRUE TRUE AT5G56730.1 peptidase M16 family protein / insulinase family protein similar to metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT5G42390.1); similar to chloroplast processing enzyme-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87946.1); contains InterPro domain Peptidase M16, C-terminal; (InterPro:IPR007863); contains InterPro domain Peptidase M16, zinc-binding site; (InterPro:IPR001431); contains InterPro domain Peptidase M16, N-terminal; (InterPro:IPR011765) -0.19163068369144 -2.13251100504093 0.0572979478932574 1 1.94297449971624 10.8232567763742 -0.19163068369144 0.068620146635347 AT5G40910_at 5.58123215773096 5.11366451628227 6.57682309252959 6.57407194964032 6.94635820984456 6.01913510496897 5.01322003424264 3.80009897188244 5.06134009141794 5.47579878628488 6.68373373294546 6.75959202383758 6.21652716568561 7.11735551920852 6.0436340887057 7.07370051919905 7.15762189832379 6.18028896310834 5.86384122832679 0.233537666298058 0.225655636912976 0.237390768761045 0.225097809233092 0.225097809233092 0.235857136100591 0.227410623699383 0.230606267737779 0.242273790878246 0.232923107091890 0.231883445581167 0.227688147932781 0.227406966602905 0.225097809233092 0.233219687756122 0.225097809233092 0.225097809233092 0.252134416683554 0.225097809233092 5 5 + 16415773 16416248 16416029.364 16412735 16416357 + gene protein_coding_gene TRUE TRUE AT5G40910.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41750.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41540.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41550.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.399752645197563 2.13173938420308 0.0573738526560688 1 1.94183782382302 11.7636005584169 0.399752645197563 0.27634789631418 AT5G11350_at 6.18053733943574 5.94714730007056 6.74964557739328 6.54535513256578 7.05160238240772 6.59870219620603 5.63678178070368 5.42858183424916 5.47255476653882 5.70419315662803 6.61240338918094 6.55173869195723 6.19879511350852 6.2011145586546 6.44735880654448 6.32207259267192 6.280966640339 6.30952649425551 5.79413404536745 0.178001879611073 0.16847447617943 0.169378521335821 0.169492243005317 0.175261899239662 0.168171302512768 0.173203669027667 0.177500963049356 0.188073750788708 0.170071617919473 0.167161347749868 0.172081699494473 0.171786290567021 0.183777364401015 0.167161347749868 0.172727537682835 0.172772293999236 0.176935839017154 0.180017312412754 5 5|0 +|/ 3624530 3625382 3625014.2 3621569 3625646 + gene protein_coding_gene TRUE TRUE AT5G11350.1 endonuclease/exonuclease/phosphatase family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18500.2); similar to putative protein-related [Medicago truncatula] (GB:ABE92649.1); similar to Os01g0610600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043546.1); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) -0.215113275579481 -2.13022983796094 0.0575226242638277 1 1.93961451409467 12.2785230389126 -0.215113275579481 0.101598165095682 AT5G04610_at 2.05022021673306 2.12973783814713 2.21290632732714 2.58370511814778 2.26876472344302 2.24967689876771 2.29504354564121 1.83756920618136 2.04332571476228 1.80267718595012 2.51881317397811 2.54717760648287 2.65998645298103 2.20738378677262 2.95016806085766 2.42148303150634 2.3670921022091 2.37280785744581 1.87665809842969 0.188850238255716 0.188689042659322 0.186130997507810 0.187847937889443 0.192225972704905 0.187932304948298 0.193696133141968 0.187993037961513 0.193733198850506 0.195178729551063 0.190099662627003 0.192932663296072 0.187814997624741 0.186130997507810 0.195638549067759 0.190161019392694 0.19925776906664 0.192109724936821 0.186130997507810 5 5 - 1325641 1326012 1325813.545 1325589 1326929 - gene protein_coding_gene TRUE TRUE AT5G04610.1 spermidine synthase-related / putrescine aminopropyltransferase-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31740.1); similar to Os08g0520400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062267.1); similar to Os04g0379300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052588.1); similar to unnamed protein product [Homo sapiens] (GB:BAB55240.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Spermine synthase; (InterPro:IPR001045) 0.216157667802773 2.1302022750075 0.0575253441076608 1 1.93957392345582 4.41003682200349 0.216157667802773 0.102885605779263 AT5G24880_at 2.40869430599518 2.45341806165699 2.8254871386247 3.12156960387886 2.48340796552676 2.9252009822391 2.33398953180881 2.54660081400398 3.07647687407703 2.57656770529031 2.28685801976405 2.53556729732090 2.73925722494821 2.6535513227343 2.71934497031835 2.75389314286071 3.39875151296987 2.69996489447742 2.96571611102041 0.172822941611794 0.174993025050111 0.173232379661934 0.182252957245878 0.166155733038629 0.176067162823067 0.177272887994320 0.171686334194939 0.170325194405191 0.173255541738496 0.179269140211558 0.171642864113296 0.169858949244794 0.169674742146220 0.167782666735352 0.170775307087509 0.178908817615915 0.170053891000296 0.166155733038629 5 5 + 8553480 8554008 8553701.364 8552746 8554077 + gene protein_coding_gene TRUE TRUE AT5G24880.1 similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G10660.1); similar to PREDICTED: hypothetical protein [Homo sapiens] (GB:XP_001130141.1) -0.213326141262559 -2.12989099229696 0.0575560692059749 1 1.93911552478689 5.43545543961854 -0.213326141262559 0.0994198166246056 AT5G54010_at 2.72168802261459 2.46764009717503 2.83851070636824 2.84317118031010 2.17665964255403 2.35235803518860 2.55768964650845 2.71965023003686 2.35440332555693 2.19302350386383 2.61107894166594 2.65167906162955 2.62863187312026 2.54998150755792 2.81090193652041 1.99408319456651 2.54560001820881 2.33402323177769 2.27029079165812 0.199554557054119 0.192649187288441 0.188331117721741 0.194871724963639 0.209125785444720 0.198632838116636 0.194872602963456 0.188331117721741 0.195828075642135 0.188714345111933 0.200511443577264 0.193715324629341 0.208675879150042 0.189845857968933 0.195343942311076 0.188331117721741 0.209185213645336 0.193600268804224 0.192640269314141 5 5 - 21937113 21937594 21937314.727 21937007 21938415 - gene protein_coding_gene TRUE TRUE AT5G54010.1 glycosyltransferase family protein similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G53990.1); similar to glucosyltransferase [Ipomoea nil] (GB:BAD95881.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.186525678750559 -2.12947491697936 0.057597162215073 1 1.93850284297384 4.97883095058974 -0.186525678750559 0.0603619093518454 AT5G02450_at 9.11204109634115 9.41410667101926 9.46912909438039 9.49150379080706 9.6574204183522 9.46080425693265 8.91314842213592 8.96127286396556 9.19970957030751 8.86836743561846 9.9291221106162 10.2502504873057 9.55400940592962 9.88549663039352 10.2606553364791 9.57116226949245 8.77715152485941 9.43483916540171 9.04217673122585 0.120250736327579 0.118289839880425 0.124555226746482 0.116861808902628 0.116858503425433 0.120066432327648 0.120555422505002 0.122904872484731 0.123555509487312 0.122332436737329 0.116972839803359 0.119776388920947 0.116522740249665 0.125977626905342 0.118182331458962 0.118619061573538 0.13236793200401 0.118050796554524 0.118511420893264 5 5 + 533499 534361 533861 533104 534654 + gene protein_coding_gene TRUE TRUE AT5G02450.1 60S ribosomal protein L36 (RPL36C) Identical to 60S ribosomal protein L36-3 (RPL36C) [Arabidopsis Thaliana] (GB:Q9LZ57); similar to 60S ribosomal protein L36 (RPL36B) [Arabidopsis thaliana] (TAIR:AT3G53740.4); similar to ribosomal protein L36 [Triticum aestivum] (GB:AAW50980.1); contains InterPro domain Ribosomal protein L36E; (InterPro:IPR000509) -0.188011656012026 -2.12914373478547 0.0576298908359337 1 1.93801519773036 18.6822218827553 -0.188011656012026 0.0630446750845763 AT5G35530_at 10.4948388647108 10.4931469393913 10.7559288245541 10.7760516603146 10.8443389640606 10.8325180238577 10.4028132895131 10.6484831339688 10.1777746946758 10.2193157936279 10.810643231711 10.8655861586479 10.7435985712584 10.6379752875138 11.2154190274755 10.6618132984085 10.7278995005891 10.6395963176612 10.2193899012507 0.0672129350907583 0.064354970247509 0.0659483299607024 0.0666642016285553 0.0654168454190803 0.0653477417501086 0.065046987772947 0.0678653680541166 0.0743668747580827 0.0699883180115006 0.064354970247509 0.067409454513866 0.0655200064092033 0.0651864401053879 0.0668810002361729 0.0652112837049567 0.0644072028373896 0.068681872231189 0.0685364067911382 5 5|0 -|/ 13727600 13729159 13727989.3 13727366 13729518 - gene protein_coding_gene TRUE TRUE AT5G35530.1 40S ribosomal protein S3 (RPS3C) Identical to 40S ribosomal protein S3-3 (RPS3C) [Arabidopsis Thaliana] (GB:Q9FJA6); similar to 40S ribosomal protein S3 (RPS3A) [Arabidopsis thaliana] (TAIR:AT2G31610.1); similar to ribosomal protein S3 [Medicago truncatula] (GB:ABE87988.1); contains InterPro domain Ribosomal protein S3, C-terminal; (InterPro:IPR001351); contains InterPro domain KH, type 2; (InterPro:IPR004044); contains InterPro domain Eukaryotic/archaeal ribosomal protein S3; (InterPro:IPR005703); contains InterPro domain KH, prokaryotic type; (InterPro:IPR009019) -0.177910282508468 -2.12879324732605 0.0576645465375503 1 1.93749915490575 21.1526699062179 -0.177910282508468 0.0427067208945689 AT5G03020_at 1.67071432417955 1.57790187037484 1.82479558639871 2.30108721518903 1.49024771666513 1.68002022055531 0.97354358140385 0.97539375173949 1.05714076223722 1.34546881615275 1.09319336917005 1.30826900082845 1.25560864380407 1.27682936653502 0.429266479457783 1.51927154505449 1.38040202539774 1.07305460118894 0.8953522941668 0.223875411559719 0.216325843728412 0.230728528429922 0.217946625486402 0.221042239727070 0.233866743627576 0.216325843728412 0.216325843728412 0.224079468857991 0.219451473294666 0.230937819761330 0.220170284161675 0.224850149896781 0.216325843728412 0.223855046912877 0.218788369965336 0.242056365339176 0.229266618159056 0.231381954843100 5 5 + 707712 708269 707922.727 707255 708394 + gene protein_coding_gene TRUE TRUE AT5G03020.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE89413.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch motif; (InterPro:IPR006651); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.205961094286228 2.12788006991450 0.0577549333399266 1 1.93615476777704 2.69486678487082 0.205961094286228 0.0901687693705067 AT5G39860_at 6.56079561315231 6.65025144239861 6.01880955638502 6.12776477790594 6.83915307406335 7.15405316267265 6.49419992261843 7.50485253490851 7.68584182734901 7.40630204136368 9.86610336370266 10.1609882750135 9.99572088270826 9.23051804504739 10.2663415105896 9.81968012667444 8.49746119059174 8.84340004314015 8.90479252119353 0.213625208032285 0.223196850939638 0.218346265359835 0.227376774449245 0.218422087637723 0.219188645773819 0.217550982134317 0.221495730599869 0.226586703997814 0.218272740880689 0.219923492185528 0.223591368942457 0.226215958483523 0.222722409444578 0.217065051433136 0.217351206378331 0.214970276647867 0.213625208032285 0.213625208032285 5 5|0 +|/ 15974934 15975499 15975207.5 15974645 15975683 + gene protein_coding_gene TRUE TRUE AT5G39860.1 PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G28857.1); similar to Os03g0171300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049112.1); similar to hypothetical protein LOC_Os10g26460 [Oryza sativa (japonica cultivar-group)] (GB:ABB47567.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.294477853299291 -2.12483969641522 0.0580568431710219 1 1.93168013004219 15.4607377486725 -0.294477853299291 0.184808636059708 AT5G59600_at 1.52756542014866 1.92282833344990 2.31483185313834 2.04708459810533 1.83541613189505 1.81502202796977 1.68532077054453 1.85885333478863 1.53041790369006 1.83575796744539 2.03780633326682 2.17978493258047 1.60147740486774 2.36846346089183 2.44509295294902 2.0775976785136 2.48644888851298 2.14100419612472 1.7486802884473 0.177331832071229 0.180052175562864 0.182848247466851 0.180358486606294 0.181947868782366 0.185618584247628 0.180561697134418 0.176954206333045 0.182096683601376 0.182572647251514 0.180500255928040 0.178436389085278 0.181783758753964 0.185068816475633 0.182544355042575 0.176954206333045 0.178237630187909 0.187404445202775 0.182581895355597 5 5 - 24028554 24029059 24028828.273 24028226 24030251 - gene protein_coding_gene TRUE TRUE AT5G59600.1 pentatricopeptide (PPR) repeat-containing protein similar to EMB2758 (EMBRYO DEFECTIVE 2758), binding [Arabidopsis thaliana] (TAIR:AT4G33990.1); similar to chloroplast import-associated channel protein homolog [Oryza sativa (japonica cultivar-group)] (GB:AAP06869.1); similar to Os03g0271300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049690.1); similar to pentatricopeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95212.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.203825538049840 2.12259957345003 0.0582802473006421 1 1.92838465920661 3.81194607583385 0.203825538049840 0.0879776336644763 AT5G07330_at 0.777889880674558 1.18245179913126 1.03166406813277 1.41512059227581 1.14927465073297 1.38697350962659 0.589887939842541 0.63931011886415 0.974834069246638 1.03740937600276 1.40973171179069 1.01230818294852 0.785864224958016 1.40054283318724 1.25530401489853 1.27635768059267 1.74668255490104 0.561370891433435 1.15215126930587 0.257499403211417 0.258235690599856 0.259049721345832 0.261250410853301 0.258050022005696 0.261111458659592 0.246203741379093 0.246203741379093 0.248792252674406 0.248970733736115 0.246754994284518 0.249643670439114 0.253529966067820 0.246203741379093 0.246235910571399 0.254727130877891 0.254766708291180 0.255242025474036 0.246709153706283 5 5 + 2316209 2316611 2316421.455 2315981 2316875 + gene protein_coding_gene TRUE TRUE AT5G07330.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63060.1); similar to unknown [Xerophyta humilis] (GB:AAT45004.1) 0.217280351568559 2.12245744649671 0.0582944489419995 1 1.92817561497807 2.13948081992201 0.217280351568559 0.105215606233672 AT5G54900_at 8.4717037831983 8.40742150278037 9.67664037060888 9.53278342852055 9.28372936205072 9.29735615239857 8.88112868404742 8.91914143718203 8.26655128672174 8.27653460250298 9.42596368079335 9.45126266157031 9.20015599618271 9.2506832569705 9.8188803818375 9.21673622858829 9.25324173321474 9.3939758074900 8.18745001771919 0.102412929806465 0.107484591820183 0.104727558184944 0.109404338630058 0.104558543207337 0.10750444408979 0.103595973425585 0.105419958619853 0.112626181125588 0.120143508139775 0.105435170377216 0.102190605729299 0.107589972731513 0.108741752306977 0.105383032208109 0.102190605729299 0.113400035332838 0.105200119049997 0.117883637587541 5 5|0 +|/ 22313470 22315218 22314852.375 22312609 22315572 + gene protein_coding_gene TRUE TRUE AT5G54900.1 ATRBP45A (RNA-BINDING PROTEIN 45A); RNA binding similar to RNA-binding protein 45 (RBP45), putative [Arabidopsis thaliana] (TAIR:AT4G27000.1); similar to RNA Binding Protein 45 [Nicotiana plumba (GB:CAC01237.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.172198102168501 2.12048889954113 0.058491489100157 1 1.92528071868785 17.8686753087545 0.172198102168501 0.0281487601976853 AT5G43450_at 8.77849907747709 9.29620844812021 10.2909799158234 10.2845228047575 10.7781456676763 9.99402264869742 9.77308952377138 9.50037581623522 7.91439921685267 8.33619163892117 9.23454738699408 8.90230110062062 9.94286376198705 9.83799507132203 8.15985185819387 9.44738951114518 9.47015263966215 9.1719479116574 8.46681891277831 0.188855600444594 0.186250313800817 0.201355094731959 0.186476814837848 0.193845732433724 0.189540141015064 0.194309563354684 0.189081832654530 0.204085915159782 0.193052671898962 0.198126764348462 0.191291070183537 0.183295320971208 0.190801276377062 0.219905151564825 0.183087052660677 0.212104897413744 0.195766338338141 0.189386430078247 5 0|5 /|- 17474591 17475138 17474791.8 17474359 17476025 - gene protein_coding_gene TRUE TRUE AT5G43450.1 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43440.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.277504104437365 2.12008450072790 0.0585320453698375 1 1.92468613469417 18.5919893601774 0.277504104437365 0.169318434296121 AT5G48240_at 4.13507657096973 4.69995512023804 6.04050695611006 5.31765886770854 5.15448008150679 5.09553874896146 3.66461607131031 3.53530798258892 2.07447487792809 3.01505845214369 3.29051484010206 3.49651198015039 2.83537349716258 3.38444940694012 3.90690739915731 3.45734292414229 2.98657090696829 3.44871376211967 3.24629042534983 0.236271793551182 0.242561553332114 0.235672162256334 0.241235651394269 0.241316064318000 0.257404060460589 0.239639291917169 0.249927273576933 0.240881108996234 0.235552270858032 0.241137076806566 0.235552270858032 0.238941665352701 0.252744971009969 0.239615958163695 0.235552270858032 0.235552270858032 0.235552270858032 0.235552270858032 5 0|5 /|+ 19577535 19578333 19577974 19576469 19578480 + gene protein_coding_gene TRUE TRUE AT5G48240.1 similar to Os11g0266000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067664.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL58467.1); contains InterPro domain Protein of unknown function DUF1665; (InterPro:IPR012459) 0.268476004605991 2.11906059997699 0.058634849634607 1 1.92318087785555 7.77009555395759 0.268476004605991 0.160651389397005 AT5G50720_at 2.24984121748126 3.22095493854750 3.78673722907106 4.48292509830722 3.85823555833724 3.84048023822679 3.84962237915559 3.98920761867615 2.75815168455657 3.2683156723956 3.93228991476939 4.26170867608927 4.43952750306585 4.37883153279782 4.11342209628579 5.04329544662458 4.89729361489258 3.90177411401638 3.20902191301356 0.249386431629671 0.238538513353125 0.244178167247895 0.245856304744461 0.244251114852179 0.256177573630008 0.243467107104052 0.248035157669610 0.252204636932338 0.241052791753516 0.241598382128504 0.244306706839517 0.244242793082662 0.252767831361628 0.248956836357712 0.241644042117839 0.266580921272169 0.25141112783619 0.247498042185474 5 5|0 -|/ 20651045 20651701 20651253.778 20650419 20651778 - gene protein_coding_gene TRUE TRUE AT5G50720.1 ATHVA22E (Arabidopsis thaliana HVA22 homologue E) Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. Identical to HVA22-like protein e (AtHVA22e) (HVA22E) [Arabidopsis Thaliana] (GB:Q9FED2;GB:Q9LUE9); similar to ATHVA22D (Arabidopsis thaliana HVA22 homologue D) [Arabidopsis thaliana] (TAIR:AT4G24960.1); similar to Protein HVA22 (GB:Q07764); similar to Os11g0498600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067939.1); similar to hypothetical protein [Triticum aestivum] (GB:BAC80265.1); contains InterPro domain TB2/DP1 and HVA22 related protein; (InterPro:IPR004345) 0.319023676849443 2.11821019636935 0.0587203643930267 1 1.92193087398134 7.38450767754516 0.319023676849443 0.208208473241113 AT5G36210_at 8.33132649607206 8.39355589198333 8.91652146972668 8.83242363612258 9.10417362433407 8.72485120892365 8.50230664394192 8.34551062416432 8.4855716249209 8.38270977359188 9.19621276211217 9.21809214590616 8.97380328171536 9.25043909693761 9.05233807850762 9.2379387239083 9.00179464703277 9.23442666932818 8.3503504505623 0.124978420825283 0.124687908261194 0.125436801619874 0.127253390957051 0.121653206454093 0.135563207827984 0.131660864581372 0.131357128552118 0.129269304746121 0.126165964351255 0.121878014740755 0.125364050290835 0.122310787992920 0.121171504520393 0.126604000300614 0.121171504520393 0.126406262160565 0.123864684382810 0.127965628706843 5 5|0 -|/ 14265487 14266582 14266083.7 14265143 14270520 - gene protein_coding_gene TRUE TRUE AT5G36210.1 serine-type peptidase similar to acylaminoacyl-peptidase-related [Arabidopsis thaliana] (TAIR:AT4G14570.1); similar to Os06g0215400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057138.1); similar to Os06g0215300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057137.1); similar to peptidase S9, prolyl oligopeptidase active site re (GB:YP_721155.1); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Cytochrome cd1-nitrite reductase-like, C-terminal haem d1; (InterPro:IPR011048); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain TolB, C-terminal; (InterPro:IPR011042) -0.193270081385862 -2.11806659863453 0.0587348159604396 1 1.92171981756750 17.4197543454283 -0.193270081385862 0.0733015575950021 AT5G41810_at 7.46060131549263 7.70357505067433 7.94154347425666 8.11378941851992 9.17066665970789 8.64015494695963 6.89472707440154 6.84985086267328 6.29598369086041 6.37869250128208 7.46844662122127 8.38638161152965 7.46626306947998 7.57266185926453 7.63271859724271 7.55478044592294 7.2092280323181 7.45591830612261 6.57382247863507 0.199108399186639 0.185552411364274 0.174682908001797 0.183922774240451 0.184595518781836 0.197701423754951 0.181065984828389 0.180166885817588 0.190054210647835 0.194713755754278 0.182743112579914 0.182298971539409 0.176184240308966 0.179026571475910 0.177379745635657 0.174682908001797 0.189197885216208 0.184134570129117 0.183346947787118 5 5 + 16756199 16756677 16756480.091 16755290 16756891 + gene protein_coding_gene TRUE TRUE AT5G41810.1|AT5G41810.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64340.1); similar to Avr9/Cf-9 rapidly elicited protein 194 [Nicotiana tabacum] (GB:AAG43553.1) 0.216780338318632 2.11470930268161 0.0590736561295771 1 1.91678676260911 14.8515966210759 0.216780338318632 0.105572061561527 AT5G33280_at 7.76203653381592 7.67166508377045 8.70449426516136 8.53891496499839 8.95510569871268 8.5506492907225 8.23320606908705 8.47120233344846 7.90184837392323 8.00154961328116 8.52849394288019 8.46439691836326 8.81940348604956 8.49719542476857 8.25914954142605 8.83690347395811 8.70023971594865 8.5868796130086 7.81741264782574 0.159016945776777 0.155221248461879 0.171193784687662 0.170143824297693 0.154230727026926 0.166591059118723 0.153604901915073 0.155106254724641 0.167836856366521 0.158917105846676 0.153247674052301 0.153646454427009 0.156547348305997 0.164573566654581 0.155779687236586 0.151029145470970 0.167792786341416 0.157657569780185 0.163981110894439 5 5|0 +|/ 12568708 12569454 12568968.3 12566510 12569737 + gene protein_coding_gene TRUE TRUE AT5G33280.1 chloride channel-like (CLC) protein, putative Identical to Putative chloride channel-like protein CLC-g [Arabidopsis Thaliana] (GB:P60300); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to ATCLC-A (CHLORIDE CHANNEL A), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to Cl- channel, voltage gated; IMP dehydrogenase related 1 [Medicago truncatula] (GB:ABE86345.1); similar to chloride channel-like protein [Oryza sativa (japonica cultivar-group)] (GB:ABB86548.1); similar to H0413E07.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86158.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) -0.202512676108002 -2.11235408211275 0.0593124674209284 1 1.91332773663083 16.6076691014115 -0.202512676108002 0.0875271264731577 AT5G06870_at 9.52850929710402 9.93762649169091 8.39797107857673 8.63127288646752 9.50898116224326 9.30569413209627 8.50505227705438 8.91893923826848 9.14048203876855 8.60964917350938 10.3848085092957 10.2048245452208 9.777228092209 10.0501272943690 10.0823070499729 10.1906759421880 8.67152678615204 10.1804777046609 8.13158677181055 0.155985210804102 0.145488523583522 0.161500556532822 0.155803141190396 0.147421306577637 0.1626002547916 0.144580169900799 0.146162367403018 0.153149971207353 0.161469977975419 0.144580169900799 0.147878606954864 0.144580169900799 0.149455337966918 0.155251074966971 0.144580169900799 0.171637258714181 0.152144085291829 0.176060474423206 5 5|0 +|/ 2134373 2134993 2134746 2133919 2135167 + gene protein_coding_gene TRUE TRUE AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding polygalacturonase inhibiting protein 2 (PGIP2) mRNA, Identical to Polygalacturonase inhibitor 2 precursor (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP2) [Arabidopsis Thaliana] (GB:Q9M5J8;GB:Q9FL58); similar to PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT5G06860.1); similar to polygalacturonase inhibiting protein [Brassica rapa subsp. pekinensis] (GB:AAX68500.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.223660431762342 -2.11212241132059 0.0593360074999504 1 1.91298756289694 18.3767489797067 -0.223660431762342 0.114063195503006 AT5G42810_at 7.06152086243686 6.95080997447241 8.2683726127374 8.2382613598512 8.75048366998083 8.0862451072286 8.33553614594789 8.21164162040744 7.52674679518876 8.05660290138548 8.65702561743 8.14596642689527 8.54338663214142 8.38770575147562 8.1737028798042 8.61272401241896 8.83159273291739 8.57968979946253 7.91402930032987 0.164279443711567 0.154527569390186 0.158899614610306 0.16367558908578 0.155151331053627 0.155495551673732 0.156789789973958 0.153111984464262 0.164222157769593 0.153098107045752 0.155606457015623 0.153272827141459 0.155210558787566 0.151598473947149 0.167111482910380 0.150529557982109 0.153878961381484 0.152895601693124 0.152523193863959 5 5 + 17185753 17186156 17185953.909 17184046 17186687 + gene protein_coding_gene TRUE TRUE AT5G42810.1 ATIPK1 (Inositol-pentakisphosphate 2-kinase 1); inositol pentakisphosphate 2-kinase Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. Identical to Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (AtIPK1) (IPK1) [Arabidopsis Thaliana] (GB:Q93YN9;GB:Q9FMY6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22100.1); similar to Os04g0661200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054147.1); similar to H0112G12.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67064.1); contains InterPro domain Protein of unknown function DUF941; (InterPro:IPR009286) -0.227601622083182 -2.11204219520974 0.0593441603295289 1 1.91286978063334 16.1498258677343 -0.227601622083182 0.118605751914193 AT5G17470_at 2.00977006027236 1.86117424391598 2.14037174783407 2.79026937143325 2.13828458956856 2.05972755826498 2.15903738451948 2.22849403310165 2.67570356579473 2.40291324975417 1.96203089729251 2.38118065322182 2.15806220446714 2.38500203497959 2.09131792795923 2.43677249168435 2.32824637090111 2.59130353830913 2.44562155573451 0.191464959556711 0.193828930351629 0.191232891019965 0.195920326273188 0.194023858370183 0.194643895146241 0.193274253260172 0.199064617108978 0.198329966078410 0.195177887043368 0.202747940193498 0.1915361393941 0.195501261718246 0.199834408573945 0.194615273362609 0.196540786976928 0.198477807914740 0.210221294073339 0.198335379229202 5 5 - 5761015 5761382 5761205.182 5760968 5761408 - gene protein_coding_gene TRUE TRUE AT5G17470.1 calmodulin-related protein, putative similar to calmodulin-related protein, putative [Arabidopsis thaliana] (TAIR:AT2G36180.1); similar to calcium-binding protein [Olea europaea] (GB:AAF31152.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299) -0.225907499355429 -2.11107106516555 0.0594429463320953 1 1.91144398294475 4.57330060958695 -0.225907499355429 0.116788574512485 AT5G64880_at 6.96959885248382 7.53751243443067 7.73756328709143 8.01993076780412 8.64843416618623 8.08631665642374 6.44136938653808 6.68705083801108 6.70084678594367 5.99391124275164 7.97715141955048 7.82921910775317 7.91499021603771 8.00993733722218 7.41065422281594 7.50976775837468 7.08771762963944 7.89596255312767 6.45054976048531 0.190352851276879 0.178927188135085 0.176837947915992 0.172562741732032 0.180774964289579 0.186903069632097 0.177543850263964 0.187668839608602 0.204814142665424 0.180813054169562 0.177503376045566 0.173721546245479 0.181332101947304 0.182672687203748 0.18005867736412 0.177467439774409 0.177730727475559 0.180015696301626 0.177655666784189 5 5|0 +|/ 25949676 25951014 25950258.5 25949516 25951379 + gene protein_coding_gene TRUE TRUE AT5G64880.1 unknown protein 0.259459276030824 2.11075959757021 0.0594746627168296 1 1.91098673973976 14.5590691954338 0.259459276030824 0.152699801342088 AT5G35550_at 0.92584848779086 1.18756131669792 1.06033913153651 0.943448467788658 0.797349653990646 1.46707058677383 0.187481314981932 0.780102895658988 0.90451985931382 0.965374110383294 1.22797485637351 1.31370302710153 1.46450233454730 1.25742043584166 1.10936727908195 0.952495451106567 1.40157771170102 1.16660222390819 0.726560109697263 0.217603241775697 0.231769526211094 0.220086976446203 0.222291200098057 0.227073660954126 0.219658629554897 0.228670172465812 0.225175698820266 0.220740586094305 0.219221597193096 0.21580169286632 0.22122113289055 0.21580169286632 0.218677158330580 0.21580169286632 0.218688131304005 0.227464708871257 0.227696809136318 0.222247899061297 5 5 + 13744310 13744931 13744685.727 13743973 13745090 + gene protein_coding_gene TRUE TRUE AT5G35550.1 TT2 (TRANSPARENT TESTA 2); DNA binding / transcription factor TT2 encodes a R2R3 MYB domain putative transcription factor that acts as a key determinant in the proanthocyanidin accumulation of developing seed. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Identical to Protein TRANSPARENT TESTA 2 (Myb-related protein 123) (AtMYB123) (Myb- related transcription factor LBM2-like) (TT2) [Arabidopsis Thaliana] (GB:Q9FJA2); similar to ATMYB5 (myb domain protein 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G13540.1); similar to GHMYB10 [Gossypium hirsutum] (GB:AAK19615.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.268921967575036 2.10769906268991 0.0597871689978187 1 1.90649504581762 1.96974528594701 0.268921967575036 0.16251330253603 AT5G66110_at 1.49134691063580 1.14669725142595 1.21182818158916 1.10475796974456 1.09568362713986 1.31291181713933 1.33716319253465 1.07308944996565 2.39998468631022 1.41409421820735 1.92228577032606 1.62685932385063 1.59086669194501 2.16428446113265 1.78449610474858 1.86719907104057 1.92784087966051 1.47339588651394 1.88379983747518 0.184967155998712 0.175426873621074 0.188033581219632 0.175823186551030 0.177518002102452 0.175565321210119 0.175426873621074 0.184306298265801 0.181278687570501 0.183975036168341 0.180127856689693 0.175426873621074 0.176960895515903 0.18658180942647 0.185547210031114 0.177626724921578 0.190291923891913 0.177959736455949 0.179734332978410 5 5 + 26447700 26447973 26447833.182 26447428 26448138 + gene protein_coding_gene TRUE TRUE AT5G66110.1 metal ion binding similar to ATFP6 (FARNESYLATED PROTEIN 6), metal ion binding [Arabidopsis thaliana] (TAIR:AT4G38580.1); similar to GMFP7 [Glycine max] (GB:AAD09515.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.200968551098374 -2.10749270362116 0.0598082959735171 1 1.9061922719804 3.06865801884678 -0.200968551098374 0.0860362709347548 AT5G55780_at 0.996480068355422 1.19076143495877 1.49916081073115 1.30935733531008 1.05198653599484 1.11699428084344 1.24682938405095 1.18072224360324 1.39996269952304 1.38757171046835 0.722125397362618 1.13888370015871 1.36206417074078 0.952918693089124 0.93812195342315 1.04813128001647 0.907630678982088 0.747785777403304 1.03495204942099 0.23643083298759 0.227192406424567 0.231309271877660 0.230718780575681 0.233063424090953 0.227472336914467 0.227705962525653 0.227484490110288 0.224272496660044 0.220656892413404 0.219676567081523 0.227494124751161 0.228629785938668 0.219755980575429 0.227844403883071 0.226486374101872 0.246513494782667 0.233051795302775 0.230075598770345 5 5 + 22595298 22595851 22595624.182 22593837 22595894 + gene protein_coding_gene TRUE TRUE AT5G55780.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55770.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G26550.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.179146847521391 -2.10724245452943 0.0598339259007309 1 1.90582511586636 2.32472144149823 -0.179146847521391 0.0496660160680625 AT5G35290_at 2.50962400817772 2.41119360096775 2.78938016312957 2.96207851214990 2.71397389661898 2.66379035649556 2.63395851182934 2.61754857281268 2.61473710852017 2.61999426318664 2.80113646006464 2.43529298924612 2.65096528643058 2.52726747506442 2.55244474392352 2.47365864650555 2.73653671464212 2.67189203779427 2.46880357404597 0.170525750901861 0.174423616440698 0.170934732111837 0.182392357876549 0.17552428173262 0.184405479169019 0.171495888840166 0.175388797515156 0.18239639932109 0.185494699242506 0.18094870293958 0.172750536337444 0.172254584366855 0.172837760758358 0.17723682863707 0.178434979146217 0.175141065209913 0.181414639111726 0.179032490385068 5 5|0 -|/ 13535126 13535496 13535261.889 13535117 13535536 - gene protein_coding_gene TRUE TRUE AT5G35290.1 unknown protein -0.173328665607270 -2.10596223511989 0.0599652060992506 1 1.90394706565956 5.24969059083594 -0.173328665607270 0.0355924849453548 AT5G54300_at 4.99671215401963 5.05671073826794 5.68579089357332 5.79832347481798 6.92087490115059 6.51977423538012 6.78198736585578 6.4619795643973 5.33958844401057 6.07810587812938 7.53972350740062 7.05449787248811 6.64277011621822 6.9865580557474 6.50227609772717 6.9013263513122 7.1721931760694 6.87008555716653 5.66521387492049 0.203798724946254 0.204628437663736 0.189583369481021 0.185367445314572 0.188847978214972 0.198366306229097 0.194219037426964 0.191504952095063 0.198435674596847 0.187695699607582 0.185367445314572 0.185367445314572 0.187709565342092 0.187226665868285 0.19443729643928 0.198166072662172 0.193113159778921 0.201739402325784 0.203546965274935 5 5 - 22071593 22072137 22071816.182 22071195 22072656 - gene protein_coding_gene TRUE TRUE AT5G54300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61260.1); similar to Protein of unknown function DUF761, plant [Medicago truncatula] (GB:ABE84235.1); contains InterPro domain Protein of unknown function DUF761, plant; (InterPro:IPR008480) -0.204691498619386 -2.10453226333017 0.0601121657647939 1 1.90184980759316 12.3542599529927 -0.204691498619386 0.0914983309535221 AT5G04050_at 2.17057858870237 2.20413774644812 2.67169491132673 2.54444334954016 3.09842430304982 3.04861564854914 2.26511646038560 2.66265999527645 2.30624262342191 2.04210557456844 2.70172120375967 2.90099838047961 2.67707584577944 2.66221229472662 2.71461658764196 2.76685863926 2.55135467236510 2.66510582175830 2.43836936541725 0.21124945565784 0.203918236635529 0.211534713023732 0.211133808108228 0.210784573109684 0.214534277516303 0.222178019012708 0.206035735757946 0.220236409665217 0.206137746741777 0.203524529833087 0.206151617214166 0.210561940165526 0.222615511989846 0.217457052404258 0.207816106253611 0.212426457295289 0.205103223440010 0.211197777497824 5 5 + 1097680 1098340 1098122.455 1096015 1098920 + gene protein_coding_gene TRUE TRUE AT5G04050.1 maturase-related similar to intron maturase, type II family protein [Arabidopsis thaliana] (TAIR:AT1G74350.1); similar to cob intron3 ORF [Marchantia polymorpha] (GB:AAC09440.1); similar to hypothetical protein MapooMp76 [Marchantia polymorpha] (GB:YP_717178.1); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 0.191569037755307 2.10167562575076 0.0604067689279821 1 1.89766164599290 5.06682493467173 0.191569037755307 0.0729792140835259 AT5G24210_at 11.1880867632331 11.2170489311349 12.6910031192173 12.6567339574579 11.5941577705549 11.3523158571114 10.6075789526867 10.5627225514822 10.7386789530764 10.1922009917726 10.7494946193844 10.2113055791832 10.7484424237627 10.8849818420051 9.76284770877759 10.9444301699118 10.8827193906356 10.7674076340037 9.91456877378842 0.0823554392797534 0.0796039460460756 0.086474580822237 0.0871005889584402 0.0827392035462448 0.0846804591771471 0.0812109366121141 0.0796039460460756 0.0861415207729744 0.0820705390273432 0.0802899955195408 0.0829502726210853 0.0816067898115394 0.0810440127544087 0.0823513318994076 0.0817768630876611 0.0826630512120074 0.0860301283223409 0.0828732370304432 5 5|0 +|/ 8218759 8219350 8219054.2 8217341 8219622 + gene protein_coding_gene TRUE TRUE AT5G24210.1 lipase class 3 family protein similar to triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT5G24200.1); similar to Os02g0286200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046574.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84413.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) 0.175864292950564 2.10156867918783 0.0604178248061496 1 1.89750488900813 21.9340909431117 0.175864292950564 0.0432680926183028 AT5G50140_at 1.41074133363739 1.26830336491879 1.55857057256532 1.38911931013189 1.35918975676265 1.46754801776867 1.60132320112568 1.38594990122382 1.69295191147836 1.72659341297151 1.35126169085129 1.36575711029875 1.3446211620433 1.19254319566919 1.24629737561900 1.12326130444484 1.61698212576613 1.76578863772906 1.28131342261317 0.198078864458326 0.197754000797688 0.201959088181567 0.194921131322705 0.194921131322705 0.199909834949373 0.206971313995339 0.204167830550806 0.195116535532143 0.201472067654486 0.197075318781616 0.200229936419809 0.195662683797549 0.194921131322705 0.201053979574672 0.19565884753851 0.197165143981369 0.198871454768100 0.205213067378330 5 5 + 20414880 20415384 20415093.455 20413082 20415423 + gene protein_coding_gene TRUE TRUE AT5G50140.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G34050.1); similar to Ankyrin [Medicago truncatula] (GB:ABE80931.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) -0.181999806738249 -2.10045064774362 0.0605335191504148 1 1.89586630295687 2.90147667776196 -0.181999806738249 0.0566418981773223 AT5G45110_at 8.29243827066894 8.78308290424984 9.7414061079501 9.93346414969534 8.84612825297547 8.54341858505074 6.83027497379657 7.03348630586259 7.39953743649323 7.08965344076022 8.17317533749845 8.1204572746174 7.90401502902024 7.9224644202194 7.25489469595374 8.02558401574414 7.92870034121429 7.93533409820822 7.02870979296667 0.197886454619436 0.185332404728583 0.185332404728583 0.190973422481931 0.192489694835744 0.197604313308292 0.196888692813829 0.200548060249717 0.203619652639377 0.205755215567448 0.197817580541689 0.188934339047039 0.190502534386424 0.193200824449928 0.191709588393369 0.185332404728583 0.186364464109257 0.198840832381162 0.191913200952393 5 5|0 +|/ 18247833 18248534 18248166.111 18246137 18248749 + gene protein_coding_gene TRUE TRUE AT5G45110.1 NPR3 (NPR1-LIKE PROTEIN 3); protein binding Encodes a parolog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. similar to NPR4 (NPR1-LIKE PROTEIN 4), protein binding [Arabidopsis thaliana] (TAIR:AT4G19660.1); similar to ankyrin repeat BTB/POZ domain-containing protein [Populus trichocarpa] (GB:ABF48718.1); similar to NPR-1 [Pyrus pyrifolia] (GB:ABK62792.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.219616199413809 2.09940265128883 0.0606421569688715 1 1.89433064085487 16.0408182979310 0.219616199413809 0.110882868221297 AT5G23120_at 10.6213598914907 10.867136917625 11.0385287620120 11.0312893804198 11.4407167136940 11.1810715937912 11.4602376588332 11.3533771613485 11.4231922104316 11.4526815896837 12.2091028190954 12.1547732295537 11.8080740477772 11.9949999939062 12.1203930463465 12.2065126265087 11.7080217346579 12.0061448293297 11.3354316507092 0.0838609063443278 0.0763572813703772 0.0788644066587928 0.083152184717263 0.0789578094875368 0.0805439460856836 0.0826797121574328 0.0786407004595966 0.0800888556416787 0.0763572813703772 0.0774159210712497 0.0763572813703772 0.0798304524000083 0.076930345144874 0.0785154392851834 0.0763572813703772 0.083883206753794 0.0776125810739627 0.0787055899030812 5 5|0 +|/ 7779196 7780442 7779787.4 7778124 7780631 + gene protein_coding_gene TRUE TRUE AT5G23120.1 HCF136 (High chlorophyll fluorescence 136) encodes a stability and/or assembly factor of photosystem II Identical to Photosystem II stability/assembly factor HCF136, chloroplast precursor (HCF136) [Arabidopsis Thaliana] (GB:O82660); similar to Photosystem II stability/assembly factor HCF136, chloroplast precursor (GB:Q5Z5A8); contains InterPro domain Glycosyl hydrolase, BNR repeat; (InterPro:IPR002860); contains InterPro domain Sialidase; (InterPro:IPR011040); contains InterPro domain Twin-arginine translocation pathway signal; (InterPro:IPR006311) -0.186251425080066 -2.09921313151633 0.0606618227691285 1 1.89405296062287 22.8391003971543 -0.186251425080066 0.0645875406925878 AT5G14970_at 10.6085411769798 10.9129166727713 11.3313627340609 11.2324328873318 11.4531878191555 11.1498397498060 11.4276421924579 11.5283687019991 11.1517907012594 11.6167906306415 12.19282480343 11.8902668928951 12.0292396428873 12.0894651996966 11.5824755381241 12.0968889543367 11.5554460665811 12.1132403500651 11.4831763116988 0.080726625487912 0.0774151612536748 0.0843882166419732 0.0800596979482693 0.0764718139791252 0.0804414840001291 0.0817365663421861 0.0753195785484253 0.0862030439815783 0.0744889061512617 0.074237748008505 0.074237748008505 0.074237748008505 0.0795749197356916 0.0802622580983164 0.0759468956044009 0.0941321494264842 0.0831359222414539 0.0747154311433466 5 5|0 +|/ 4848059 4848729 4848416 4847281 4848868 + gene protein_coding_gene TRUE TRUE AT5G14970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14910.1); similar to seed maturation-like protein, putative [Medicago truncatula] (GB:ABE86960.1) -0.194797307369693 -2.09916734811778 0.0606665744580833 1 1.89398588112191 22.8860282312546 -0.194797307369693 0.0782768613376849 AT5G04010_at 2.2549857781956 2.19571246815344 2.31280366191577 2.51333367594625 2.42940374126671 2.26500358466873 1.71063677826760 1.97465142362272 2.44588232804871 2.58620275079182 2.16747636903259 1.93939787292839 1.94619940147692 1.92465740706613 2.15262281152432 1.91808575111800 2.10968026909984 1.88371346501165 1.91819483457733 0.250934837700094 0.246736979211554 0.253392184396272 0.252224602990987 0.257072313196817 0.248382637184343 0.25448789035296 0.263185490964175 0.256092647695632 0.262561885741545 0.253814577724217 0.251423079607199 0.251281576955976 0.251524199962989 0.245886597799509 0.256061669911355 0.246260692682666 0.252910378783004 0.249463256121884 5 5 - 1080238 1080766 1080545.182 1080104 1081073 - gene protein_coding_gene TRUE TRUE AT5G04010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03920.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE90259.1); contains domain no description (G3D.1.20.58.140); contains domain F-box domain (SSF81383) -0.186366414971275 -2.09875430978989 0.0607094581277157 1 1.89338074191436 4.36806095877786 -0.186366414971275 0.064856666826164 AT5G01220_at 8.08491606543287 8.15149918366328 8.3809668963365 8.39785017141295 8.57886594388682 8.28717777679119 8.17385593171352 8.06109999819899 7.67969749271008 7.76107619245423 8.86703172422265 8.84801717015795 8.84941693528208 8.94459216999412 8.80248682933773 9.53223220319768 8.71520532925495 8.58836026244277 7.99906440267239 0.142729070807909 0.137566972701034 0.149436358417181 0.147993414993519 0.137947173158641 0.142487778556880 0.141424738014334 0.141313227889600 0.152003438735151 0.150117091567794 0.137566972701034 0.139282509961432 0.153061674617951 0.143666190831313 0.146444015161497 0.138305260682336 0.145919796131313 0.146548198275165 0.141756753476262 5 5 - 86987 87740 87414.636 86584 89985 - gene protein_coding_gene TRUE TRUE AT5G01220.1 SQD2 (SULFOQUINOVOSYLDIACYLGLYCEROL 2); UDP-sulfoquinovose:DAG sulfoquinovosyltransferase/ transferase, transferring glycosyl groups involved in sulfolipid biosynthesis similar to SETH2, transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G45100.2); similar to sulfoquinovosyldiacylglycerol synthase type 2 [Vigna unguiculata] (GB:ABA55726.1); similar to Os07g0100300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058670.1); similar to Os01g0142300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041991.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) -0.181187445256254 -2.09838991970825 0.0607473147567771 1 1.89284691199687 16.6178775912287 -0.181187445256254 0.0554083751410168 AT5G23405_at 4.28447530609697 4.47390998639497 5.98297304597755 5.78729404797385 6.7556996604524 5.5067065506162 3.65419709868719 3.76856004401875 3.33120197027265 3.21663523157889 3.26258918491144 3.93740174292166 3.40739302851055 3.37170127744169 3.72455861387817 3.87412101111104 4.24513570921393 3.90808208046459 3.66279144657042 0.245277936863574 0.249450249835402 0.257311756126050 0.253132163024069 0.268347620190373 0.253127652257204 0.241760151812998 0.249266676126197 0.242298759620576 0.25035972660283 0.250442469321918 0.245028444728402 0.253414628031849 0.246515079217854 0.247442698919388 0.241760151812998 0.252653018402521 0.241760151812998 0.245136632183390 5 5|0 -|/ 7883154 7884219 7883667.333 7882851 7884363 - gene protein_coding_gene TRUE TRUE AT5G23405.1|AT5G23405.2 high mobility group (HMG1/2) family protein similar to HMGB6 (High mobility group B 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G23420.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); similar to HMG1/2-like protein (GB:P40620); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071)|similar to HMGB6 (High mobility group B 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G23420.1); similar to Os08g0101100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060758.1); contains InterPro domain HMG1/2 (high mobility group) box; (InterPro:IPR000910); contains InterPro domain High mobility group box; (InterPro:IPR009071) 0.331383275703047 2.09819107084997 0.0607679826803459 1 1.89255561316121 8.58668482445921 0.331383275703047 0.222106640000979 AT5G28600_at 1.71821174857927 1.9759662466663 2.36123104598378 2.11045581716075 1.66314741399510 2.03786014357690 1.82723521886148 1.99571335683555 2.19604009642086 2.06432577409231 1.82369153070487 2.12908309320347 1.70567718427259 1.12087067462076 2.00726423139856 1.91186584199197 1.73451747685453 2.17891793312865 1.97676964227516 0.201709983456237 0.200059403728918 0.208341998000435 0.212787597253371 0.199723738258183 0.199455029500476 0.203541391547202 0.213744315039945 0.207085734063909 0.204152378110655 0.207079666426991 0.200833892272354 0.201283959975158 0.203140551063916 0.211079008641421 0.214792860956141 0.203937347058131 0.210931592005505 0.228540465766965 5 5|0 +|/ 10600976 10603426 10602448.556 10597813 10603454 + gene protein_coding_gene TRUE TRUE AT5G28600.1 similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35770.1); similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD64941.1) -0.206319387154123 -2.09808326173827 0.0607791909147009 1 1.89239768490798 3.91399320730808 -0.206319387154123 0.0944884976693276 AT5G44770_at 1.97921521733236 2.01728198297146 2.34244028155832 2.68979327682609 1.93221035680138 2.27016123976366 2.31070406753590 2.15335361418182 2.55439925967888 2.61487278235904 2.3757166885631 2.52419078615579 2.65399147088240 2.54901803456719 2.27541033086827 2.72101168793663 2.57045343203227 2.31226555659993 2.62278295791594 0.217734092543603 0.215367079888559 0.217403301417020 0.217934865765198 0.217254630123207 0.223578240986348 0.213278517582934 0.219972252147740 0.216782765053437 0.212397292161143 0.213693507708399 0.215310377792985 0.219090412753134 0.213051122149844 0.216367056313871 0.212411038457436 0.215903758986175 0.219950330540259 0.220441103320510 5 5 + 18083368 18083852 18083655.727 18082282 18083907 + gene protein_coding_gene TRUE TRUE AT5G44770.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54020.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54050.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.201726895287814 -2.09737102403659 0.0608532870375832 1 1.89135440910694 4.75944946217237 -0.201726895287814 0.088422829819525 AT5G47700_at 9.88714923441364 9.9734410660387 10.0860442222266 9.96257393794916 10.0975936910737 9.94971026784868 10.1777608012822 10.0840172438389 9.85830710655105 9.69031018272542 10.9607026025176 11.2023642122949 10.2078086024900 10.6037898357780 11.2055580009778 10.458398243081 10.4512906331055 10.2186456746195 9.52799472814783 0.0867258414961472 0.0861303316596647 0.0878791426855325 0.0916374134152127 0.0877768595082244 0.086800497611896 0.0879791221189639 0.0905961254741403 0.0923990208562917 0.100638512614968 0.0907034548627196 0.088219793490119 0.0902736829069073 0.0866265450875414 0.0944490053353632 0.0861303316596647 0.0907262025770682 0.088592555547479 0.0936840955936698 5 5|0 -|/ 19345248 19345926 19345592 19345029 19346209 - gene protein_coding_gene TRUE TRUE AT5G47700.1|AT5G47700.2 60S acidic ribosomal protein P1 (RPP1C) Identical to 60S acidic ribosomal protein P1-3 (RPP1C) [Arabidopsis Thaliana] (GB:Q8LEQ0;GB:Q9FIK9); similar to 60S acidic ribosomal protein P1 (RPP1A) [Arabidopsis thaliana] (TAIR:AT1G01100.4); similar to acidic ribosomal protein P1a-like [Solanum tuberosum] (GB:ABB29934.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) -0.174021464314058 -2.09512569400515 0.06108743596608 1 1.88806630705339 20.2051731737920 -0.174021464314058 0.0399709646055004 AT5G57560_at 6.12925638447625 6.11340563022568 6.35416351220377 6.37578668335068 7.59665794596784 7.46481814038993 3.15934767364091 3.91738177022259 7.59482333692527 4.30953564508408 7.12736354516325 3.77388310685998 3.50577430531269 6.60020208605884 5.06595637954861 4.90231173282886 2.95862558556173 4.45805488338789 4.37763900301401 0.250230883928800 0.245032380981565 0.241173083276302 0.251673377618395 0.241173083276302 0.255664236858732 0.24158265335229 0.241173083276302 0.256117651356213 0.243427739128120 0.241173083276302 0.244523854964161 0.241173083276302 0.250686863657057 0.247326369013214 0.243537019312667 0.242322478884489 0.249119736634032 0.241173083276302 5 5 - 23324552 23325033 23324809.727 23324356 23325508 - gene protein_coding_gene TRUE TRUE AT5G57560.1 TCH4 (TOUCH 4); hydrolase, acting on glycosyl bonds Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli Identical to Xyloglucan endotransglucosylase/hydrolase protein 22 precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) (XTH22) [Arabidopsis Thaliana] (GB:Q38857;GB:Q8H783); similar to XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G25810.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) -0.238916195742715 -2.09499330813696 0.061101268135944 1 1.88787247799664 11.0020292749420 -0.238916195742715 0.133231439151948 AT5G42520_at 8.36296646448694 8.81398163477206 8.87968583360326 9.03303891898528 9.58691433354116 9.62806947937755 8.57971604120386 8.70108118477606 7.49690731716691 8.43217860058011 9.66863249991637 9.49882978980757 9.34626821292265 9.54046962064344 9.2818255895083 9.47427125088461 9.35045611127098 9.42357481498408 8.47040783648966 0.145055118751172 0.139968751685188 0.145352479368532 0.145493264195756 0.142714640848934 0.147959322467665 0.148794701861774 0.145140200987954 0.157127687917071 0.151126984678543 0.143336360331122 0.139968751685188 0.139968751685188 0.142523364487514 0.148122733996957 0.140905982665988 0.152922722437605 0.150042983878409 0.165446829194897 5 5 + 17019101 17019620 17019402.545 17017487 17019835 + gene protein_coding_gene TRUE TRUE AT5G42520.1|AT5G42520.2|AT5G42520.3 ATBPC6/BBR/BPC6/BPC6 (BASIC PENTACYSTEINE 6); DNA binding / transcription factor|ATBPC6/BBR/BPC6/BPC6 (BASIC PENTACYSTEINE 6) similar to ATBPC4/BBR/BPC4/BPC4 (BASIC PENTACYSTEINE 4) [Arabidopsis thaliana] (TAIR:AT2G21240.2); similar to GAGA-binding transcriptional activator [Cardamine pratensis] (GB:ABG57061.1); contains InterPro domain GAGA binding-like; (InterPro:IPR010409) 0.199300004978451 2.09497694580569 0.0611029779394989 1 1.88784852185169 17.7387845218372 0.199300004978451 0.0853696559509144 AT5G37840_at 2.36679878754721 2.32619633486166 2.58382016484756 2.52766077372048 2.16162010121576 2.01954288120683 1.84436044736322 2.03347728304922 2.39426607910613 2.72070543859930 2.30546004003934 2.39206452367562 2.956555514795 2.39437593403408 2.66128391255098 2.61413624368056 2.65799332841213 2.55990076088464 2.64967364659564 0.190449416678676 0.195912219858638 0.195320490059542 0.197537693204263 0.193527199003164 0.200845935064551 0.189501493435217 0.191090146448719 0.193271767089816 0.194590380693558 0.192503057404955 0.192981001511029 0.188263798612425 0.192495970159845 0.20031726602995 0.192032675098467 0.191537559886378 0.189687588193151 0.191936403334496 5 5 - 15080001 15080486 15080302.364 15079238 15080632 - gene protein_coding_gene TRUE TRUE AT5G37840.1 similar to PMI2 (plastid movement impaired 2) [Arabidopsis thaliana] (TAIR:AT1G66480.1); similar to At1g66480 [Medicago truncatula] (GB:ABE83549.1) -0.175032743957543 -2.09461260145317 0.0611410623346803 1 1.88731510134895 4.81090276523953 -0.175032743957543 0.0426549207410045 AT5G55310_at 8.81226795632948 8.87594789848337 9.62422282778986 9.5847984821078 9.80762410608637 9.4247322981504 8.90925597900147 8.68911101037752 8.7246488691688 8.8725882632221 9.21860969349675 9.22774232385963 9.16529306313483 9.30218625542164 8.95923314014597 9.31818691745972 8.91967505966818 9.13557615115562 8.82682194984012 0.153127805213615 0.135638012791061 0.150444829242433 0.135077778887145 0.139072781328616 0.154852347292911 0.139021563669176 0.14062511471851 0.155209881425180 0.141120242489448 0.139518771372952 0.137645577158865 0.140154925303201 0.140002995646382 0.139355626340568 0.135077778887145 0.163153946180685 0.14602292961338 0.140333335160206 5 5 - 22447621 22448567 22448033.727 22447402 22452302 - gene protein_coding_gene TRUE TRUE AT5G55310.1 TOP1alpha (TOPOISOMERASE I) Encodes one of two Arabidopsis topoisomerase I genes. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. similar to TOP1BETA (DNA TOPOISOMERASE 1 BETA), DNA topoisomerase type I [Arabidopsis thaliana] (TAIR:AT5G55300.1); similar to DNA topoisomerase I [Daucus carota] (GB:CAB46363.1); similar to topoisomerase I [Pisum sativum] (GB:CAA74890.1); similar to topoisomerase I [Nicotiana tabacum] (GB:AAD08711.1); contains InterPro domain DNA topoisomerase I, DNA binding, eukaryotic-type; (InterPro:IPR008336); contains InterPro domain DNA topoisomerase I, C-terminal, eukaryotic-type; (InterPro:IPR013499); contains InterPro domain DNA breaking-rejoining enzyme, catalytic core; (InterPro:IPR011010); contains InterPro domain DNA topoisomerase I, catalytic core, eukaryotic-type; (InterPro:IPR013500); contains InterPro domain DNA topoisomerase I, C-terminal; (InterPro:IPR001631) -0.193380163386925 -2.08928406868492 0.061700622395229 1 1.87951762723152 18.1979113296007 -0.193380163386925 0.0775237298245802 AT5G47260_at 0.711634503161922 0.671143881719505 0.605684991776926 0.717225010784118 0.597797504570613 0.692197302382957 0.82415591246318 0.807987642134899 0.984568859217911 0.951781750920753 0.692291756898787 0.686571078435025 0.989280698135223 0.701935438318422 0.714803777220925 0.720034711136757 0.753514189299367 0.732193981283084 0.695041674099912 0.199278109259244 0.189339696366201 0.192206304511680 0.193933315565043 0.192317851261967 0.193424245265816 0.201342720135855 0.191597244285043 0.195610759162646 0.193565656374498 0.189750376256643 0.191958207613506 0.201513723458529 0.192666998330810 0.190933301325817 0.190974004595792 0.195109557193780 0.198888302396575 0.194135257814943 5 5 + 19208848 19209235 19209027.455 19206638 19209295 + gene protein_coding_gene TRUE TRUE AT5G47260.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Putative disease resistance protein At5g47260 [Arabidopsis Thaliana] (GB:Q9LVT3); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G63020.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain AAA ATPase; (InterPro:IPR003593) -0.169167704320222 -2.08892551074746 0.061738448962942 1 1.87899318974422 1.51645782625117 -0.169167704320222 0.026389219713393 AT5G40670_at 10.5705066519836 10.8538639968450 11.5620742919705 11.4824586725063 11.5766458999048 11.1727079825397 10.9240491928136 10.7634165856873 9.56467888240915 10.2392883398855 10.9501652549664 10.5133923187676 11.0271271665666 11.0911483847255 10.4485419578430 10.9889378321395 10.9545184906475 10.7190308831309 9.8933025889599 0.105560130195297 0.105879720342401 0.110332021579799 0.108891988843316 0.108466748311835 0.108218159646992 0.105560130195297 0.110528952604526 0.140227412679571 0.110262721370454 0.107481283848300 0.105834353331392 0.105560130195297 0.113501078787325 0.115415665796008 0.105633472878938 0.119621019430553 0.125556293569869 0.111292613836279 5 5|0 +|/ 16303839 16304782 16304241.7 16302939 16305021 + gene protein_coding_gene TRUE TRUE AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein Identical to Cystinosin homolog [Arabidopsis Thaliana] (GB:P57758); similar to Lysosomal Cystine Transporter family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97107.2); contains InterPro domain Cystinosin/ERS1p repeat; (InterPro:IPR006603); contains InterPro domain Lysosomal cystine transporter; (InterPro:IPR005282) 0.202628243358333 2.08826252742337 0.0618084491643277 1 1.87802357593891 21.481064270873 0.202628243358333 0.090849364994318 AT5G66040_at 10.7640902302138 10.6109053527603 10.9331486561034 10.9207659877986 11.3320821364599 11.1542790251150 11.0693901604031 11.246847492411 11.1610429063456 11.5017158232006 12.1408640427888 11.9134422528548 12.2474393929745 12.0929256093411 11.8244483805350 11.6631336100345 11.9197641944697 12.2584735405440 11.6108122724262 0.0638147438115012 0.0618741132865156 0.0618208739084631 0.0611377984764776 0.0586476981502308 0.0656475165484836 0.0584562359046057 0.0586604355617705 0.0631453105998982 0.0589000943818599 0.0584562359046057 0.059301305347627 0.0589779390217461 0.0595631889318051 0.0608849921067263 0.0588186123901933 0.0664463955953477 0.0610770112052439 0.0594318777566266 5 5|0 +|/ 26427785 26428313 26428048.556 26427746 26428581 + gene protein_coding_gene TRUE TRUE AT5G66040.1|AT5G66040.2 senescence-associated family protein Identical to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese) (Senescence- associated protein) (Sulfurtransferase protein 16) (AtStr16) (STR16) [Arabidopsis Thaliana] (GB:Q39129;GB:Q9FKX8); similar to SEN1 (DARK INDUCIBLE 1) [Arabidopsis thaliana] (TAIR:AT4G35770.1); similar to Chain A, Solution Structure Of At5g66040, A Putative Protein From Arabidosis Thaliana (GB:1TQ1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) -0.178120607176737 -2.08805738668756 0.0618301238944116 1 1.87772357984021 22.7199811527916 -0.178120607176737 0.0509627586858761 AT5G55770_at 0.802600752679044 0.6161205952875 0.940627822923043 0.77028901264995 0.90572691601548 1.02279607336919 1.05970299162077 0.880675817115369 1.08208770242769 1.67740004634722 1.06109393280924 0.856178649799652 0.926450586028343 1.14635142368330 0.941260947910955 0.592907030830452 0.633376592243184 1.26228557917165 0.932689807175036 0.216403315422819 0.215477650958524 0.215619008638717 0.215388142512230 0.212087736697077 0.208965064944078 0.206879656976773 0.224830180573357 0.211731664364923 0.218463337407495 0.215090640354935 0.211043885541753 0.216213596272537 0.213170349179086 0.206879656976773 0.207422338014571 0.212146799919511 0.212934284942012 0.212628733713977 5 5 + 22590391 22590925 22590677.909 22588871 22590958 + gene protein_coding_gene TRUE TRUE AT5G55770.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55780.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G26550.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.181236237908970 -2.08783762391929 0.0618533515425299 1 1.87740221237721 1.953924470104 -0.181236237908970 0.057277192330155 AT5G17950_at 0.96692524968712 1.42041717255822 1.52179497864167 1.53339811675209 1.02406240050412 1.17873901105666 1.11707008989174 1.24168152981810 1.61236211705539 1.89274546677461 0.988335961454785 1.50802809539462 1.26522370111795 1.06267859290863 1.30409746482516 1.24015791287237 1.43052787816536 1.36791160909304 1.34336246036713 0.196995462852270 0.186291108641227 0.195624522587621 0.197073871721386 0.190096022060923 0.189055869453532 0.186291108641227 0.199630154229781 0.195549310901658 0.202093778052295 0.190167120335148 0.187723202914102 0.193951214019371 0.190256221237042 0.186291108641227 0.192825712889218 0.190240060541820 0.193854828787417 0.202400201915085 5 5 - 5944579 5944935 5944712.909 5944555 5944961 - gene protein_coding_gene TRUE TRUE AT5G17950.1 contains domain "Winged helix" DNA-binding domain (SSF46785) -0.198815671902743 -2.08742304174943 0.0618971929688064 1 1.87679598626008 2.69402448530273 -0.198815671902743 0.0857000560634445 AT5G45600_at 5.28848647795355 5.96056671200652 6.24728265003058 7.0302589408131 7.51658672102653 5.88408349230354 5.40819542936226 5.44159476386333 4.18645114488050 3.82126033695356 5.80472576796996 6.38431721000233 5.88030296824529 6.37458023271806 6.11648432474286 6.35957859134743 4.75144986408331 5.7008893140801 4.4904648890938 0.288259285503513 0.284449752203780 0.296986578801351 0.287618566195227 0.282032759570987 0.303043720979624 0.288825543647158 0.28361169033345 0.286033520415408 0.285329407053848 0.283669340938142 0.282847690603534 0.281851868868603 0.286848945663473 0.285564960230299 0.286630689033719 0.29571721291149 0.289575076806788 0.285764385348990 5 5|0 +|/ 18506054 18506663 18506365.111 18505129 18507096 + gene protein_coding_gene TRUE TRUE AT5G45600.1 GAS41 (Gliomas 41) The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man. similar to YEATS family protein [Arabidopsis thaliana] (TAIR:AT2G18000.1); similar to YEATS [Medicago truncatula] (GB:ABE79958.1); contains InterPro domain YEATS; (InterPro:IPR005033) 0.459751884938312 2.08687606894895 0.0619550795209362 1 1.87599623726167 11.1409318106489 0.459751884938312 0.334265555426363 AT5G54070_at 2.31786115550593 2.17115163957681 2.59454704134422 2.56197550922604 2.26944469187418 2.72123980338789 2.45657322738579 2.44426503591973 2.81568870904886 2.52365168379444 2.55280445614179 2.65759351032151 2.73579818793613 2.54127787481644 2.78871293151086 2.69376244136342 2.83860605583368 3.21921300115233 2.8498765168111 0.190602552609227 0.191378116507200 0.190637081544994 0.188129990063373 0.188177342935675 0.188416243179440 0.189628856570166 0.188129990063373 0.194044479943899 0.189277158677375 0.190638011406053 0.192582314678294 0.188129990063373 0.189451232025388 0.188421302242236 0.190426373216626 0.195628731213862 0.190616617270915 0.191527871641362 5 5 + 21961828 21962261 21962088.364 21961209 21962545 + gene protein_coding_gene TRUE TRUE AT5G54070.1 AT-HSFA9 (Arabidopsis thaliana heat shock transcription factor A9); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-9 (AtHsfA9) (HSFA9) [Arabidopsis Thaliana] (GB:Q9LVW2); similar to ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G26150.1); similar to Heat shock factor protein HSF30 (Heat shock transcription factor 30) (HSTF 30) (Heat stress transcription factor) (GB:P41152); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.196278970525929 -2.08485010011015 0.0621699361953143 1 1.87303465285859 5.18373727666223 -0.196278970525929 0.0824247030602595 AT5G60470_at 1.16962362839209 0.825892425973542 1.38941612291708 1.07106299675008 0.89785183809794 1.29574364528567 0.581429457396674 0.61967397911318 1.05127620602694 0.98164819262297 1.12006400209816 1.55079999293806 1.50599193965856 1.46046577395968 1.35510037072222 1.54018056933811 0.928908198145768 1.15871943330868 1.32335271354919 0.209707819200322 0.208985047810105 0.203756108478692 0.203756108478692 0.209505131223454 0.203756108478692 0.210530992098499 0.205717102282204 0.205940638774576 0.215914468970715 0.206530846900341 0.203756108478692 0.206647448796672 0.203756108478692 0.209840015695805 0.205786297990088 0.214203244327608 0.209854882711554 0.208572983225282 5 5 + 24339445 24339971 24339762.455 24338196 24340016 + gene protein_coding_gene TRUE TRUE AT5G60470.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G45260.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABD28501.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.214513639898132 2.08461848067506 0.0621945446253813 1 1.87269613511949 2.20448067295121 0.214513639898132 0.106577002195445 AT5G19210_at 3.37032999201685 3.53199340897006 3.69516154196285 3.42920983125683 4.28907225714894 4.47136896058567 3.13048126072798 3.16435418865437 2.31051864135978 3.13607276925368 3.99169627310534 4.01641866669978 3.48189790292662 3.66889843717382 4.11294753147287 3.87519681420836 3.65232773287941 3.26544575500735 3.20803402099077 0.222235869592723 0.220884493538262 0.218828545861786 0.222564031920327 0.218828545861786 0.225910758409646 0.227161944714699 0.227982961292496 0.229182823062452 0.224310315651936 0.220941145166372 0.228649321720120 0.225618598233522 0.223212518942361 0.219230096081101 0.223709245695310 0.225515544203274 0.226719877587554 0.228374590455403 5 5 + 6462898 6463595 6463287.636 6461393 6463868 + gene protein_coding_gene TRUE TRUE AT5G19210.1|AT5G19210.2 DEAD/DEAH box helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 58, chloroplast precursor (EC 3.6.1.-) (RH58) [Arabidopsis Thaliana] (GB:Q3E9C3;GB:Q84W18); similar to ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT3G58510.3); similar to DEAD/DEAH box helicase, putative [Medicago truncatula] (GB:ABE77801.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650)|Identical to DEAD-box ATP-dependent RNA helicase 58, chloroplast precursor (EC 3.6.1.-) (RH58) [Arabidopsis Thaliana] (GB:Q3E9C3;GB:Q84W18); similar to EMB1586 (EMBRYO DEFECTIVE 1586) [Arabidopsis thaliana] (TAIR:AT1G12770.1); similar to putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum] (GB:AAG34873.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.183631593614052 2.08176933347763 0.062498007786754 1 1.86853314763711 6.95673582169158 0.183631593614052 0.0626937749350813 AT5G62460_at 6.80988120610957 7.19412796366282 7.85108355557445 7.91371027526631 8.75812698159576 8.12914600092696 7.31072486619118 7.22178769213627 5.80033856725384 6.63555124032396 7.71925279622602 7.67184085664274 7.69671393613668 7.7018461493173 7.4806768676953 7.73974968623332 7.27426040277126 7.60718999423199 6.02167511621859 0.251322471711036 0.246762067751940 0.253541199744485 0.258270299081612 0.248254232993195 0.270520650122784 0.249413125651799 0.250881676637572 0.256533558881857 0.246864169453813 0.246711478449131 0.241000094068478 0.246851377035902 0.25262821284025 0.249294027918662 0.240765984047286 0.254052645592294 0.265837432762519 0.245061588053824 5 0|5 /|+ 25093369 25094250 25093817.444 25092109 25094520 + gene protein_coding_gene TRUE TRUE AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G47550.6); similar to Zinc finger protein, putative [Solanum demissum] (GB:ABI34360.1); similar to Os11g0600700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068224.1); similar to Os08g0436200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061887.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.233368789115782 2.08070525114005 0.0626117023581602 1 1.86697890981337 14.5305550563941 0.233368789115782 0.128933804624066 AT5G49230_at 7.22023909832794 7.50944306225779 7.79032466378001 8.18553355617424 8.67163559722241 8.21068364749385 8.1360704820613 8.0647960490126 7.64462634434974 7.36955981716258 8.53066782253785 8.73935919565311 8.22859688794924 8.35356439541318 8.46702016260035 8.62646476407954 7.82962977156315 8.61448805630939 7.50980679519365 0.179026366232666 0.181730613036917 0.202388612390395 0.174568604585663 0.172260024302866 0.184910551858907 0.179290580389613 0.173622895535951 0.197106723753175 0.177231123587247 0.182474859754487 0.176097080396735 0.175943247242685 0.192227791247264 0.185740025768969 0.175932594698578 0.194976326569092 0.181357876451761 0.176149469764038 5 5|0 -|/ 19976287 19977411 19976609.7 19976099 19977770 - gene protein_coding_gene TRUE TRUE AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE) Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06760.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19; (InterPro:IPR008598) -0.222790918454864 -2.07995061272153 0.0626924521922477 1 1.86587683216804 15.9394515366655 -0.222790918454864 0.117037388086360 AT5G45790_at 1.27972014552914 1.68596920899361 2.27552100280157 2.13321682833943 2.38387656556737 1.88038349572975 1.71177471547677 1.64325075511700 1.58807263627723 1.57740661210314 1.46421141427128 1.59643194226794 1.62520850057851 1.84807256038006 1.66226481723951 1.72391587687472 1.74452600701021 1.64555320094028 1.47250954803716 0.168635882179720 0.166687789754836 0.170261119223758 0.169723880535214 0.167399838949318 0.16503374440822 0.173669974039591 0.16503374440822 0.169620425780891 0.169453652049341 0.168369293401917 0.165622318309735 0.165488971761312 0.177473158445916 0.177285157439695 0.165673941125860 0.175820606807024 0.189051763084628 0.172629286553638 5 5 + 18590334 18590694 18590506.727 18589620 18590891 + gene protein_coding_gene TRUE TRUE AT5G45790.1 similar to RPD1 (ROOT PRIMORDIUM DEFECTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G33495.1); similar to Protein of unknown function DUF860, plant [Medicago truncatula] (GB:ABE79863.1); contains InterPro domain Protein of unknown function DUF860, plant; (InterPro:IPR008578) 0.221206394188986 2.07946405066966 0.0627445688388741 1 1.86516633165845 3.47909874240324 0.221206394188986 0.115245776967093 AT5G24140_at 0.355823252349785 0.282277001722507 0.132074964723249 0.902018415056992 0.379104482028798 0.511486610026465 -0.0116841946142456 0.0542047386178976 -0.0160455833068792 0.222579082231889 0.513152028145648 0.559753847426407 0.55406603430024 0.39500817312678 0.702299249131478 0.6249727528355 0.863752508994745 -0.321596200911725 0.463722319354104 0.180870095904205 0.181521450699807 0.182191037441005 0.178014327008575 0.181940814020005 0.181782787679215 0.185524067972907 0.180115283521104 0.189639136395385 0.184331032757971 0.184501149494445 0.178177227373422 0.185378975309125 0.189420640398233 0.181291524056652 0.189419988144726 0.182519104759612 0.187628537365543 0.18481447488592 5 5|0 -|/ 8164557 8165331 8164998.4 8164359 8167676 - gene protein_coding_gene TRUE TRUE AT5G24140.1 SQP2 (Squalene monooxygenase 2); oxidoreductase Encodes a protein with similarity to squalene monoxygenases. Identical to Squalene monooxygenase 2 (EC 1.14.99.7) (Squalene epoxidase 2) (SE 2) (SQP2) [Arabidopsis Thaliana] (GB:O65403); similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:AT5G24160.1); similar to SQP1 (Squalene monooxygenase 1) [Arabidopsis thaliana] (TAIR:AT5G24150.1); similar to Squalene monooxygenase 1,1 (Squalene epoxidase 1,1) (SE 1,1) (GB:O65727); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Squalene epoxidase; (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 0.239877646686530 2.07880293188057 0.0628154482973636 1 1.86420103224896 0.680585486351017 0.239877646686530 0.136273086641458 AT5G35730_at 6.40712439427536 6.68007323857756 7.60941740173837 7.32840596809582 8.0013097001232 7.47650062982398 6.97032976446985 6.5987233369113 5.42213912113028 5.35906902318395 7.0826387987353 7.31541584680435 6.75753753320224 7.2060039983376 6.95080198247797 7.18503065153482 6.78695606159573 7.02311400894001 5.48237814827036 0.246441508719771 0.249080581106055 0.241860585422709 0.241860585422709 0.249333715385399 0.250140523918878 0.241860585422709 0.247869599012202 0.257503619549941 0.245407679194024 0.24363444476509 0.243930249179604 0.253044832825886 0.244202762244143 0.251941374829092 0.241860585422709 0.269336384395794 0.251068608098782 0.252009161668756 5 5|0 +|/ 13913203 13914018 13913494.4 13910937 13914204 + gene protein_coding_gene TRUE TRUE AT5G35730.1 EXS family protein / ERD1/XPR1/SYG1 family protein similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT2G32295.1); similar to EXS, C-terminal [Medicago truncatula] (GB:ABD28452.1); similar to EXS family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99182.2); similar to Os12g0595000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067180.1); contains InterPro domain EXS, C-terminal; (InterPro:IPR004342) 0.234352307896339 2.07838365341138 0.0628604389658097 1 1.86358890177217 13.3638019497844 0.234352307896339 0.130307334422215 AT5G24120_at 8.0266492327939 8.59264564472712 9.90204983180405 10.3455592313871 9.97637370135324 9.76744763951486 10.8153403930183 10.8174778648988 9.47233567832843 9.9243409422748 10.2015280682767 9.8401405706718 10.4979711058082 10.3752986740209 9.03740194285247 10.7483828984311 10.6691325984640 10.2057860488659 9.83362660039291 0.151979158569287 0.144985119333612 0.145831989820428 0.143936014729301 0.13875598580924 0.143456723879367 0.145201015691962 0.149077204431822 0.145815050350981 0.144823451738553 0.138339267838829 0.145329012356499 0.139974536923496 0.147118908679870 0.152009497506645 0.142283017133421 0.143678136356803 0.137834738876476 0.146217558079987 5 5|0 -|/ 8157797 8158537 8158219.6 8157554 8160232 - gene protein_coding_gene TRUE TRUE AT5G24120.1 SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor Encodes a specialized sigma factor in chloroplasts and is responsible for the light-dependent transcription at the psbD LRP. similar to SIGB (SIGMA FACTOR B), DNA binding / DNA-directed RNA polymerase/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G08540.1); similar to Os05g0586600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056463.1); similar to plastid sigma factor PpSIG5 [Physcomitrella patens] (GB:BAD80742.1); contains InterPro domain Sigma-70 region 4; (InterPro:IPR007630); contains InterPro domain Sigma-70 region 3; (InterPro:IPR007624); contains InterPro domain Sigma-70 factor; (InterPro:IPR000943); contains InterPro domain Sigma-70 region 2; (InterPro:IPR007627); contains InterPro domain Sigma factor, region 2; (InterPro:IPR013325); contains InterPro domain Sigma factor, regions 3 and 4; (InterPro:IPR013324); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.233574322995415 -2.07729781518961 0.0629770965499957 1 1.86200382887138 19.7506377651485 -0.233574322995415 0.129583997154546 AT5G54310_at 8.61513691532457 9.05033159191626 9.4891016606389 9.53108451614237 9.8574098899705 9.41150227949482 8.46725734178143 8.37707302843922 7.99125435733407 8.2177695735211 9.23749301308516 9.18105976134066 9.13135609172902 9.17778806479452 9.25564554247809 9.21742087168304 8.83425497066609 9.35931719849362 8.10211106132792 0.149639510373090 0.144714111760422 0.149807878164987 0.148701711244721 0.151043403288024 0.158608633774904 0.145286135765633 0.15508102137183 0.174803840271628 0.148355726430881 0.147255126495934 0.146213696238216 0.142196939668020 0.148553573934500 0.149988309234858 0.144935268409966 0.149234433666072 0.149875412248013 0.162417730461979 5 5|0 -|/ 22074536 22075506 22075017.3 22074278 22078482 - gene protein_coding_gene TRUE TRUE AT5G54310.1 AGD5 (ARF-GAP DOMAIN 5); DNA binding A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. similar to AGD15 (ARF-GAP DOMAIN 15), DNA binding [Arabidopsis thaliana] (TAIR:AT3G17660.1); similar to Arf GTPase activating protein [Medicago truncatula] (GB:ABE84233.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 0.215824361765427 2.07654229445228 0.0630583870836977 1 1.86090112148888 17.7388639546359 0.215824361765427 0.109192388063716 AT5G56110_at 1.38708046175350 1.03858144072064 1.21616863467272 1.16990799539656 1.22317458425860 1.39998147212167 1.14348099399283 1.37727363792990 1.73405401543834 1.27724784273196 1.05431625268738 1.04407525775565 1.52991593815314 1.35325747298716 1.55343243729942 1.10430477853584 1.39005977005554 0.95773569991211 1.42155312419655 0.189048522953216 0.185068889550239 0.192679444682895 0.192836106614787 0.192920628827877 0.196322339099751 0.195886625339979 0.200262669342149 0.196056826770109 0.194567286182889 0.185848497125344 0.190134960338039 0.196172463648823 0.198913794544436 0.186530529483349 0.185159092896945 0.209097731739380 0.189891524332461 0.186016122162095 5 5 + 22737304 22737669 22737484.636 22736417 22737890 + gene protein_coding_gene TRUE TRUE AT5G56110.1 AtMYB103/AtMYB80 (myb domain protein 103, myb domain protein 80); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to AtMYB35 (myb domain protein 35), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G28470.1); similar to OSIGBa0124N08.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67046.1); similar to Os04g0470600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053052.1); similar to typical P-type R2R3 Myb protein [Sorghum bicolor] (GB:AAL84759.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.193271309054608 -2.07602780511598 0.0631138005436467 1 1.86015029122143 2.60745891679525 -0.193271309054608 0.0792112786444409 AT5G24940_at 2.10213442323744 1.56991975547349 2.06794818868091 1.69411185831589 1.16234960366180 1.76315058783117 1.55756647292877 1.60934209457752 2.31898559647824 1.96791180403783 1.95200234026933 1.75269014781432 1.66400227872957 1.77420010060045 2.10713175624787 1.40906353572738 1.77136274019958 2.02555428370256 1.71775559164304 0.202465640918435 0.202840172164409 0.200371936936142 0.198502636763594 0.203393866218791 0.208891623294356 0.202978980872549 0.199993731611274 0.208661327068768 0.211180133487237 0.20704271398418 0.205169117002584 0.204029147634541 0.200965558067203 0.200584638867082 0.213462975020263 0.206816522678958 0.199111670155285 0.202054398533073 5 5 - 8591418 8591865 8591642.364 8591410 8593604 - gene protein_coding_gene TRUE TRUE AT5G24940.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT5G10740.1); similar to protein phosphatase 2C [Mesembryanthemum crystallinum] (GB:BAB88944.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.255843692123976 -2.07509266825967 0.0632146381010456 1 1.85878575477281 3.59509132073725 -0.255843692123976 0.153487740490763 AT5G49960_at 4.82935063261107 4.62575528482976 5.15501980715996 4.57548221967347 5.58324861664499 5.25956373129367 4.92695671087890 4.50969013674182 5.18276075586424 4.87907166603856 6.58564860427607 6.51850218307681 5.79231889809276 6.00596808233193 6.04397053620369 5.81322827588775 5.60768754887996 6.21595931506342 5.12756919238092 0.237328886092673 0.231882428220872 0.233116915402106 0.245110950424311 0.231882428220872 0.239642404742286 0.233875897714108 0.235569022739669 0.243809816304048 0.233677643322941 0.231882428220872 0.237794979611083 0.238592839884911 0.234006326935566 0.242755370399779 0.231882428220872 0.23838784161196 0.238354849145259 0.231882428220872 5 5|0 -|/ 20341420 20342136 20341740.2 20341399 20344913 - gene protein_coding_gene TRUE TRUE AT5G49960.1 Identical to Putative ion channel DMI1 [Arabidopsis Thaliana] (GB:Q9LTX4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02940.1); similar to Putative ion channel DMI-1 (Does not make infections protein 1) (GB:Q6RHR6); similar to Putative ion channel POLLUX, chloroplast precursor (GB:Q5H8A5); similar to putative DMI1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81711.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) -0.242905971773806 -2.07345684257972 0.0633913986797316 1 1.85639932579541 10.5011555434314 -0.242905971773806 0.140184765245057 AT5G66920_at 1.85384660251026 2.08016277311290 1.56147211691567 1.73106802268185 1.65979147104470 1.89103951864003 1.84717171382922 2.36348620077722 2.9427794310239 2.46797180617304 4.45210650237001 4.73121645287549 3.65089798895028 4.12152956565931 5.46927379238146 3.2022495163213 3.31439160404039 4.38942270499291 2.86935736204949 0.200426046133983 0.193532246312982 0.195091410886967 0.19469847263641 0.195596651361705 0.198731279923782 0.194110467714338 0.195513278164928 0.195620832427885 0.194807500730268 0.205449633966703 0.196551557498482 0.192818363546708 0.198347757415637 0.199555092791558 0.191925046490410 0.215798009800944 0.194539556710973 0.192310142767024 5 5|0 +|/ 26741817 26742540 26742026.667 26740049 26742852 + gene protein_coding_gene TRUE TRUE AT5G66920.1 SKS17 (SKU5 Similar 17); copper ion binding / oxidoreductase similar to SKS15 (SKU5 Similar 15), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G37160.1); similar to SKS4 (SKU5 Similar 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G22010.1); similar to SKS16 (SKU5 Similar 16), copper ion binding / pectinesterase [Arabidopsis thaliana] (TAIR:AT2G23630.1); similar to PS60 [Nicotiana tabacum] (GB:CAA65634.1); similar to Multicopper oxidase, type 1 [Medicago truncatula] (GB:ABE89109.1); similar to Os07g0119400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058771.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.215582349521307 2.07213614622409 0.0635344485160433 1 1.85447312757831 5.33671591028783 0.215582349521307 0.109454590407108 AT5G43460_at 10.5461118970003 10.6460814024704 10.9380344881325 10.9514065016942 11.6419062807135 11.4719925662441 9.91257121545733 10.1231136977021 10.2645583872184 9.99423383913688 11.1357829237879 10.7968395233930 10.9534205684222 11.0337297536064 10.5352703640355 10.8355202449163 10.5992924682359 10.6584623333898 10.3131121470753 0.0885606933694235 0.0876602329201011 0.0919601331108413 0.0899031968511992 0.091174110810505 0.0947686139269657 0.0895538067270166 0.0896977475934845 0.103303047127901 0.0877532845078117 0.0894073893031408 0.0886704416739912 0.0885857601723942 0.0879797955313219 0.0930229407163217 0.0877512268406957 0.097840881101227 0.0915449763516263 0.0891486514211577 5 5|0 +|/ 17477997 17478695 17478424.4 17477101 17478979 + gene protein_coding_gene TRUE TRUE AT5G43460.1 lesion inducing protein-related similar to lesion inducing protein-related [Arabidopsis thaliana] (TAIR:AT1G04340.1); similar to putative lesion-inducing protein [Capsicum annuum] (GB:AAR83861.1); contains InterPro domain Surfeit locus 4-related; (InterPro:IPR011592); contains InterPro domain HR-like lesion-inducer; (InterPro:IPR008637) 0.176170207791040 2.07060046123651 0.0637011683207707 1 1.85223394139546 21.2834895379852 0.176170207791040 0.0499680230976917 AT5G01030_at 5.68601005041897 6.39684322477504 6.85255647562824 7.30456839406119 6.7863732284467 7.43528877317028 5.75933097955582 6.42306214598204 6.08314309186921 6.4077620308457 6.62060846182645 6.6438969940114 6.6970569442633 6.45627552778426 6.44247607393485 7.01227260344165 6.8554773705693 6.46352581915527 6.19126659617001 0.198427460830827 0.189758600997833 0.198178786398556 0.195327344022996 0.187687430256465 0.190069621863854 0.187582557826441 0.191617179317338 0.193104834905971 0.195044683916998 0.192301312818222 0.18889259337662 0.195135884641649 0.193229365869034 0.195262794016157 0.187379439758296 0.189389274469684 0.188625234174146 0.188601119146028 5 5 + 12274 12977 12695.545 9868 13234 + gene protein_coding_gene TRUE TRUE AT5G01030.1|AT5G01030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37930.1); similar to hypothetical protein MtrDRAFT_AC146330g22v1 [Medicago truncatula] (GB:ABE90884.1); contains domain Transcriptional factor tubby, C-terminal domain (SSF54518) -0.321326511336481 -2.07054447382502 0.063707254332877 1 1.85215231754162 13.0186738076723 -0.321326511336481 0.216921727368012 AT5G05300_at 4.08999563000781 3.86769662954557 5.49444915657006 5.73426414910913 4.27426058821288 3.62313282357271 2.47217670723759 2.36023427642418 3.83915492806861 2.65454621001772 2.21869516723454 4.44759677958752 2.73665837777373 3.54704581336392 3.38479332584614 2.43199900350188 2.58416215771253 3.09984087564002 2.45528733120043 0.302436842427546 0.300453943061211 0.301140665577876 0.309741384416192 0.300136722533124 0.299613550409693 0.299008561246332 0.300013300926904 0.315822593122108 0.293385774790443 0.293385774790443 0.29781554711763 0.296901270213572 0.293385774790443 0.29483617539214 0.298198219014167 0.293385774790443 0.297633483746086 0.293385774790443 5 5 - 1570114 1570364 1570234.818 1570103 1570411 - gene protein_coding_gene TRUE TRUE AT5G05300.1 unknown protein 0.230804182100232 2.06873006615565 0.0639047840312237 1 1.84950753883667 7.00919879209072 0.230804182100232 0.127571521243963 AT5G35470_at 1.06007079654732 1.05520713329495 0.731138476524668 1.35210280610942 0.541096916013766 1.21939157655008 0.897407602262768 1.03905924146252 1.61610820863937 1.27140423395020 1.00039753406014 1.03127593639641 1.00697947763039 0.567642886127399 0.845507900871023 0.44272571034535 1.49128678011648 1.57703626095528 1.09443212840532 0.173859731276382 0.176862329314226 0.175802506284398 0.180597992359272 0.178691149717204 0.175686177936167 0.177483094964942 0.175771420374356 0.175768949623505 0.180629567546877 0.179934967348133 0.180654568037504 0.174503840513212 0.174071810560800 0.182332149604642 0.173859731276382 0.177073403624293 0.179180854709910 0.177815433642477 5 5 - 13699740 13699921 13699847.364 13699706 13699978 - gene protein_coding_gene TRUE TRUE AT5G35470.1 unknown protein -0.262268813144900 -2.06717022310437 0.0640750624711777 1 1.84723451082821 2.14827002750124 -0.262268813144900 0.161021686340503 AT5G15550_at 5.37882628782543 5.4943774074596 6.4895736104145 6.38403787276142 5.3563681266805 4.79668646767571 4.37206343146983 4.44938296232887 2.72531066304373 3.15852077383495 3.62081342930765 3.58480921421322 3.40837874728617 3.16488812484775 3.90196955362650 3.65063266244617 3.74450088799175 3.27661088024920 3.5966338184376 0.274127218365412 0.265529223781669 0.265529223781669 0.268487966037543 0.265529223781669 0.271730238323167 0.265529223781669 0.269949797005530 0.274648350124197 0.269321902261004 0.269282260186698 0.269207344703217 0.266583227325429 0.272583685244866 0.27509083253144 0.266371411561328 0.274744819745433 0.282371377814317 0.279505418766113 5 5|0 -|/ 5059071 5059940 5059558.889 5058752 5062090 - gene protein_coding_gene TRUE TRUE AT5G15550.1|AT5G15550.2 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein / notchless protein, putative [Arabidopsis thaliana] (TAIR:AT5G52820.1); similar to WD40-like [Medicago truncatula] (GB:ABE82641.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain NLE; (InterPro:IPR012972)|similar to guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative [Arabidopsis thaliana] (TAIR:AT1G48630.1); similar to guanine nucleotide-binding family protein / activated protein kinase C receptor (RACK1) [Arabidopsis thaliana] (TAIR:AT3G18130.1); similar to WD40-like [Medicago truncatula] (GB:ABE82641.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain NLE; (InterPro:IPR012972) -0.208629676330602 -2.06712528916478 0.0640799739787632 1 1.84716904176058 8.69227978212772 -0.208629676330602 0.101456641090014 AT5G49480_at 8.61098366393294 8.84612708762498 10.603197470067 10.6788000371236 9.37050692513589 9.2420306276211 10.6227780620640 10.7340807215444 8.25136588756025 8.91557993639409 9.75385680258166 10.0660117787124 10.1692164877214 9.77842329495282 9.14240682139342 10.7996995175533 10.6037553950628 9.53400943540704 8.24995678640708 0.124529568642760 0.128735228596793 0.130827554025092 0.130241650715790 0.124529568642760 0.133465460820759 0.126327612352929 0.126865987568681 0.144819980620787 0.137863741403099 0.13405356666016 0.125420691202956 0.12613444118279 0.129178352152264 0.135622091341197 0.124529568642760 0.129765184431461 0.132992543789669 0.148818017900602 5 5 + 20088042 20088491 20088280.909 20087969 20088864 + gene protein_coding_gene TRUE TRUE AT5G49480.1 ATCP1 (CA2+-BINDING PROTEIN 1); calcium ion binding AtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl. similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to hypersensitive reaction associated Ca2+-binding protein [Phaseolus vulgaris] (GB:AAD47213.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.176702577664855 2.06633110246287 0.064166841335902 1 1.84601199292510 19.0651747302860 0.176702577664855 0.0518883044469877 AT5G19630_at 7.50497506839663 7.14009791246724 8.18335420063097 8.18654189237286 8.50526806634867 8.20871568902645 7.70384942307789 7.67432066920813 6.77048886044802 6.77396413178816 7.84066496687619 7.44582397062488 7.4590991623454 7.7502268520998 7.55440218072243 7.67902099254396 7.96212787885054 7.89209951528021 7.18846658360837 0.258008578218622 0.248368530002033 0.252302278308043 0.257651771640359 0.254816862297983 0.261149969899384 0.238451270755006 0.238451270755006 0.298209339433141 0.264810042076669 0.282171037998657 0.238451270755006 0.239721945976311 0.263334085322873 0.257334008792274 0.238451270755006 0.238451270755006 0.238451270755006 0.240583428205097 5 5 - 6629615 6629796 6629694.6 6627977 6629997 - gene protein_coding_gene TRUE TRUE AT5G19630.1 similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABE92731.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) -0.193744590921775 -2.06439313955344 0.0643792809609296 1 1.84318926972128 15.1928435561242 -0.193744590921775 0.0815307447941864 AT5G66800_at 2.17632594237514 1.92863982572643 2.22743150343186 1.78048327548942 1.98464174636734 1.94467617877857 2.17029785841689 1.94643575895971 2.26912241420454 2.63017766985946 2.65192222107616 2.59374453969807 2.32097123586009 2.46920421156213 2.60940436496925 2.23292228734874 2.75165338189641 2.63023357499317 2.40177454329065 0.188370844499554 0.192755060912415 0.186803966349738 0.191147003277602 0.179283169444338 0.185416988234611 0.178510695610357 0.185008045854851 0.194612659156168 0.188196415507037 0.179378266753738 0.189199022301169 0.191404335248569 0.188335746358032 0.187545881761537 0.184144943551642 0.181535925151115 0.191633550789258 0.187523382433196 5 5 + 26688687 26689071 26688833.182 26688649 26689740 + gene protein_coding_gene TRUE TRUE AT5G66800.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50640.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80518.1); similar to Os02g0762600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048205.1) -0.204621249669014 -2.06313388171324 0.0645176767765502 1 1.84135563476342 4.50296577100669 -0.204621249669014 0.096790421352467 AT5G38980_at 12.7342049580729 12.9691647692164 13.1830823540389 13.3325808166728 13.1362652494110 12.7314466940389 12.9692080586682 13.162862445243 12.8498136028568 13.0209848339929 13.2457748898328 13.3560504241017 13.3740129435493 13.4612576429152 13.0510288206668 13.4376101198559 13.0708628834003 13.3795220198002 13.0737039335402 0.0673623797554632 0.0653129534394959 0.0710889994230251 0.0648801005118201 0.0651519334811125 0.071238788268139 0.0678408230941544 0.0646339812813035 0.0708293106491064 0.0643195454028681 0.064469729962605 0.0632734367853482 0.0656704508359023 0.0662093147504727 0.065919640606604 0.0632734367853482 0.0714148323869299 0.063824646330872 0.0632734367853482 5 5 + 15624099 15624310 15624210.091 15624001 15624580 + gene protein_coding_gene TRUE TRUE AT5G38980.1 unknown protein -0.200313248118650 -2.06027466529024 0.0648329561839199 1 1.83719380627018 26.1666097972429 -0.200313248118650 0.0913977664161384 AT5G64240_at 9.2254514085621 9.2605596556748 10.3269229439130 10.3396662570956 10.6266513891605 10.2072865701215 10.3422441652023 10.1628592560979 9.51116584237719 9.7494631417834 9.96502728890848 9.74786473635275 9.89638239076279 9.82605795643483 9.4589837694188 10.1043826042198 10.2874524272623 10.0660431536626 9.4798494541828 0.104710609849125 0.103289129760445 0.101332170805731 0.107995329698724 0.102383006895179 0.104238723429257 0.101166521563466 0.108202283428759 0.110069613362428 0.104841246300542 0.101257909782622 0.103369953751258 0.106213747279430 0.105108894032009 0.102035370964635 0.102380384085961 0.105098625772980 0.105246684080564 0.109204013312955 5 5|0 +|/ 25713641 25714283 25713902.222 25712846 25714642 + gene protein_coding_gene TRUE TRUE AT5G64240.1|AT5G64240.2 latex-abundant family protein (AMC3) / caspase family protein similar to LOL3 (LSD ONE LIKE 3), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G02170.1); similar to ICE-like protease p20 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG66264.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600)|similar to LOL3 (LSD ONE LIKE 3), caspase/ cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G02170.1); similar to hypothetical protein [Oryza sativa] (GB:AAG60197.1); similar to Os10g0565100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065417.1); contains InterPro domain Peptidase C14, caspase catalytic; (InterPro:IPR011600) -0.191711512611376 -2.05936806433924 0.0649332284001223 1 1.83587462153014 19.8110470908913 -0.191711512611376 0.079197948012473 AT5G04020_at 6.09060246255937 6.08804213015569 5.98922895022072 6.15360087840424 6.35681363425793 6.13722750439619 4.86429677913989 4.73136372780275 5.80058074200335 5.43635542894436 6.69980094724082 6.99703152535228 6.38904870710629 6.8715438365046 6.5025420295414 6.32543818090357 6.22737543282663 6.71570111037974 5.58868496521212 0.194951952145497 0.197321937867353 0.196255906422206 0.196768282969171 0.198905761648074 0.201041471161151 0.201725590536805 0.202465704630744 0.194951952145497 0.203819031564661 0.194951952145497 0.194951952145497 0.194951952145497 0.200324482153713 0.196691168451561 0.199820728487491 0.200649613732200 0.203100701777535 0.195114552879765 5 5 - 1081979 1082526 1082174.455 1081610 1086545 - gene protein_coding_gene TRUE TRUE AT5G04020.1 calmodulin-binding protein-related (PICBP) similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38800.1); similar to Calmodulin-binding, plant [Medicago truncatula] (GB:ABE94197.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) -0.176500210523611 -2.05917024191273 0.064955127478557 1 1.83558680113825 11.9011973083430 -0.176500210523611 0.0527501587770568 AT5G45670_at 1.13548637672527 0.973034386627659 0.690808922428657 0.532739546553814 0.600737354901154 0.628638032170679 0.883956575347963 0.640586232397636 0.772371751913837 0.4686380994524 0.97915803812642 2.49986491629626 0.652686855692088 0.844385889215802 4.87864219144106 1.21035664443255 0.74559625157034 0.997812609641354 1.21329308577369 0.220073673582486 0.218938332388719 0.227992444615287 0.221679258193446 0.219685365403521 0.233041830194270 0.223169447076673 0.224346646755853 0.222563926547668 0.219140438442191 0.222796701728141 0.227971827422777 0.221049722864577 0.221713993494588 0.265493845271622 0.218892658497426 0.221104942697722 0.226648866693976 0.218892658497426 5 5|0 +|/ 18546867 18547367 18547067.8 18545721 18547677 + gene protein_coding_gene TRUE TRUE AT5G45670.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT4G18970.1); similar to GDSL-lipase protein [Capsicum annuum] (GB:AAX20033.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.178857377863378 2.05759396854125 0.0651298712711799 1 1.83329378170922 1.97033038019342 0.178857377863378 0.0577557199864749 AT5G53210_at 2.63828034348227 2.81463148527277 2.50442198402808 2.87239645127854 2.42398071369152 2.66860173361676 2.21949058106335 2.32909028984888 2.93036799557437 2.42698923317902 2.38325327977356 2.76421160225442 2.65776900934268 2.26151736192150 2.81137577306952 2.60837964040163 2.76507903264073 3.18373770642151 2.38133376212871 0.190162036210118 0.185478470354232 0.191561365725690 0.191495898760207 0.186064445015480 0.185527316955403 0.186545714255571 0.190096651241342 0.192104346680277 0.185859451535781 0.192946674954088 0.189263871630898 0.185478470354232 0.191589292217646 0.195347292939509 0.185478470354232 0.19864338093892 0.185478470354232 0.190292734917060 5 5|0 -|/ 21604828 21605841 21605291.556 21603832 21606167 - gene protein_coding_gene TRUE TRUE AT5G53210.1 DNA binding / transcription factor similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G06120.1); similar to basic helix-loop-helix-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46113.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.195035410733968 -2.05658909716306 0.0652415015959162 1 1.83183232855285 5.18835124246305 -0.195035410733968 0.0844883412061954 AT5G35630_at 12.6934324675202 12.8835093879837 13.1043771336099 13.1526852731289 13.2295321425360 12.9661064877083 13.4163193569871 13.5170756255032 13.6754332413424 13.6820759541543 14.2570181906273 14.2481990263951 14.0240977451997 14.1697634129528 14.2570427152606 14.1567163956726 13.5821361463252 14.1711141226603 13.5966444557564 0.0589566206104008 0.0569793787745828 0.0598294553377282 0.0601457143212253 0.0563249435153116 0.0632745908682408 0.0559159265994167 0.0594551916973413 0.0660349011672218 0.0562292622115991 0.0559623021516223 0.0559159265994167 0.0559159265994167 0.057800136859529 0.0566469436593691 0.0559159265994167 0.0604769734558752 0.061038787482937 0.0584141842947453 5 5|0 +|/ 13849872 13850424 13850186.8 13847659 13850772 + gene protein_coding_gene TRUE TRUE AT5G35630.1|AT5G35630.2|AT5G35630.3 GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase|GS2 (GLUTAMINE SYNTHETASE 2) chloroplastic glutamine synthetase Identical to Glutamine synthetase, chloroplast/mitochondrial precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS2) (GLN2) [Arabidopsis Thaliana] (GB:Q43127); similar to ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G37600.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to GLN1,4 (Glutamine synthetase 1,4), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G16570.1); similar to Glutamine synthetase, chloroplast precursor (Glutamate--ammonia ligase) (GS2) (GB:Q42624); similar to plastidic glutamine synthetase precursor [Brassica napus] (GB:CAA73062.1); similar to glutamine synthetase [Brassica napus] (GB:CAB72423.1); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) -0.179468539280892 -2.05445525646777 0.0654791472222002 1 1.82872982466253 27.0002024942744 -0.179468539280892 0.0594481972714454 AT5G54510_at 6.61931472343887 6.85868235576214 5.94252337468952 6.50199227958885 6.37869156399397 6.70877247817239 6.96321847813162 7.51769702441707 5.17579558339303 5.64302210948948 9.23048018874896 8.7963461963739 7.70099123156922 7.63628571837133 8.26682434215677 7.71021080376014 7.43830048156505 9.2626927155396 7.43057579011721 0.235303003558508 0.211621881743965 0.220037907990045 0.212400237222182 0.209474462687454 0.224338135296063 0.214856637329664 0.208015387228435 0.249562128980333 0.220110495361065 0.216578296266831 0.218382459347435 0.215821822527887 0.214100340418019 0.208937713611045 0.208372646157922 0.216645495631574 0.220098793682307 0.219162299044316 5 0|5 /|- 22148558 22149091 22148880.6 22148319 22150904 - gene protein_coding_gene TRUE TRUE AT5G54510.1 DFL1 (DWARF IN LIGHT 1); indole-3-acetic acid amido synthetase Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). Identical to Indole-3-acetic acid-amido synthetase GH3.6 (EC 6.3.2.-) (Auxin- responsive GH3-like protein 6) (AtGH3-6) (DWARF IN LIGHT 1 protein) (DFL-1) (GH3.6) [Arabidopsis Thaliana] (GB:Q9LSQ4;GB:Q8VYV6); similar to GH3.1 [Arabidopsis thaliana] (TAIR:AT2G14960.1); similar to YDK1 (AUXIN UPREGULATED1, YADOKARI 1), indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT4G37390.1); similar to GH3.5/WES1, indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT4G27260.1); similar to auxin and ethylene responsive GH3-like protein [Capsicum chinense] (GB:AAS02074.1); similar to Nt-gh3 deduced protein [Nicotiana tabacum] (GB:AAD32141.1); similar to auxin-induced GH3 protein [Pinus pinaster] (GB:CAJ14972.1); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) -0.253296838033483 -2.05439468532609 0.0654859049304613 1 1.82864177469715 13.8555603451546 -0.253296838033483 0.153492969031882 AT5G51260_at 6.51883916574241 6.40994049492602 7.76085009625274 7.84443906701169 8.55374817913017 8.24587616697732 7.78717843595111 8.23124432450209 6.36603576568402 6.75441859786579 8.00328714757083 7.84815398534212 8.32439041288416 8.20300488552932 7.39098504257894 8.42168909920242 8.3182876695188 7.82190501872247 6.46733830941544 0.200338642436335 0.200870339167049 0.208596470798931 0.220608889727007 0.206812325728134 0.210343641344095 0.203100651287778 0.200282501271773 0.206650532828775 0.201521568952726 0.211370197311059 0.202166687137831 0.200282501271773 0.205111841334155 0.209828762357005 0.202416633985004 0.212553119610126 0.201434294545315 0.207673632722660 5 5|0 -|/ 20849464 20850485 20849989.2 20849251 20851008 - gene protein_coding_gene TRUE TRUE AT5G51260.1 acid phosphatase, putative similar to acid phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G25150.1); similar to acid phosphatase 1 (GB:1908418A); contains InterPro domain Acid phosphatase (Class B); (InterPro:IPR005519); contains InterPro domain Plant acid phosphatase; (InterPro:IPR010028) 0.203355322798159 2.05273021457083 0.0656718617117041 1 1.82622257826515 14.9543780573069 0.203355322798159 0.0964809977845777 AT5G24070_at 0.975544242995007 1.39715205900893 1.13543772322569 1.15979328682703 0.830423132406411 0.816193580269744 0.999887100483236 1.0029697475302 1.91768391690261 1.42297425884883 1.31459206049392 1.51357285344574 1.70998193861169 1.42563965909021 1.33657063501033 1.28381499238468 1.65528281151980 1.82298036940969 1.46456580701382 0.220855941124870 0.22254628831225 0.230551112835797 0.231397687198965 0.222033503393897 0.220402715806193 0.220120271668343 0.245505680365228 0.230717594055497 0.224903130361861 0.228758773326193 0.226283422021624 0.224094271227078 0.220120271668343 0.224424345854667 0.223237535909464 0.224314051059828 0.223986565665106 0.221127251677867 5 5|0 -|/ 8134305 8135351 8134764.3 8134304 8135994 - gene protein_coding_gene TRUE TRUE AT5G24070.1 peroxidase family protein Identical to Probable peroxidase 61 precursor (EC 1.11.1.7) (Atperox P61) (PER61) [Arabidopsis Thaliana] (GB:Q9FLV5); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT2G43480.1); similar to putative peroxidase [Oryza sativa (japonica cultivar-group)] (GB:BAD68110.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.187160441938107 -2.05230670042955 0.0657192566811403 1 1.82560714650287 2.59444798038537 -0.187160441938107 0.073126259942773 AT5G04710_at 7.6889152713228 7.72359643049954 8.64096633776863 8.44245624764687 8.69158189885401 8.37338336373426 8.08025206487391 7.88688604794455 7.24636532197482 7.61373829963622 8.06378353236558 8.29520781695838 8.12592600462999 8.06288025826196 8.51269908391413 8.48195462776874 7.93569548187266 8.08009647375644 7.42300414083536 0.179339160702972 0.173282219073227 0.179981155314230 0.173405907213105 0.177323596874563 0.180366445626935 0.178463865712098 0.175446535704354 0.198286002487758 0.186426704802038 0.183667815896705 0.173282219073227 0.173954466917116 0.185040462889919 0.176530443521785 0.176935651917740 0.182223289895131 0.179450728296887 0.179469073462095 5 5|0 -|/ 1357307 1358148 1357766.9 1356991 1360248 - gene protein_coding_gene TRUE TRUE AT5G04710.1 aspartyl aminopeptidase, putative similar to aspartyl aminopeptidase, putative [Arabidopsis thaliana] (TAIR:AT5G60160.1); similar to Peptidase M18, aminopeptidase I [Medicago truncatula] (GB:ABE80427.1); similar to Os01g0967900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045513.1); contains InterPro domain Peptidase M18, aminopeptidase I; (InterPro:IPR001948) -0.187133960548104 -2.05105124952525 0.0658599423525349 1 1.82378306230547 16.0022462065421 -0.187133960548104 0.0732677075045421 AT5G58060_at 9.67977300496452 10.1138705221701 10.7426426232478 10.8084783654714 10.9926622324914 10.8045427100636 10.1813824782661 10.4450913763133 9.92675652401959 9.70945836675161 10.9521733955300 10.7442172121994 10.8147334590307 10.7368194177335 10.6012730020550 10.7237658340560 10.1957696289057 10.7793081712737 9.62096546427738 0.100426007214069 0.0970108778497436 0.104049662201567 0.101640782459271 0.0992111424100712 0.102826390746636 0.102993088938915 0.09741719199949 0.110975504403246 0.112147596174290 0.097740050167844 0.0970108778497436 0.100480567740085 0.105334843102218 0.097531537178696 0.0970108778497436 0.107242819853594 0.100190574978729 0.106545707655713 5 5|0 +|/ 23515583 23517329 23516198.7 23515365 23517610 + gene protein_coding_gene TRUE TRUE AT5G58060.1 YKT61 (similar to yeast SNARE YKT6 1) member of YKT6 Gene Family Identical to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1) (YKT61) [Arabidopsis Thaliana] (GB:Q9ZRD6); similar to ATYKT62 [Arabidopsis thaliana] (TAIR:AT5G58180.1); similar to NTGP1 [Nicotiana tabacum] (GB:AAD00116.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 0.201626803556576 2.05086070324331 0.0658813197551534 1 1.82350624834054 20.6940058975140 0.201626803556576 0.094422902795835 AT5G25360_at 9.08336375713706 8.94641917304996 9.78359080916572 9.66825174100792 10.3137923993042 9.63419229432866 9.62379330655799 9.04054297297226 8.2708330581523 8.56864984149555 9.7785405235284 9.74216912272564 9.77750440373915 9.67247894103926 9.69916264366505 9.83656764853146 9.8308764571804 9.50412610597284 8.40450496393413 0.132837343548153 0.12254977725519 0.123905133267097 0.121639166217503 0.121850837251719 0.122510879766344 0.121701827040088 0.125956842696963 0.161416770739201 0.126888012766899 0.122114694872154 0.121679211005956 0.120566879610062 0.125358739389971 0.124310759580265 0.122059847058113 0.127402567103835 0.141016746199216 0.123438791474092 5 5|0 -|/ 8800083 8802312 8801594.667 8799713 8802649 - gene protein_coding_gene TRUE TRUE AT5G25360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15350.1); similar to hypothetical protein [Glycine max] (GB:AAN03467.1) 0.257233642744833 2.05045256488081 0.0659271308518797 1 1.82291336253909 18.5841637326864 0.257233642744833 0.158048672303974 AT5G42100_at 6.38611147306511 6.9160939746478 7.28852669762308 7.43843968904218 7.01110676534483 7.6830198750084 7.31466595896286 8.03706586793481 7.51348936124077 7.56360042218772 8.97467714532141 8.91058371142413 9.04650491444312 9.06293075233797 8.4639212434342 8.94269296225142 8.49671226666795 8.38512534509599 7.91117344660026 0.168549085226180 0.160837157480835 0.154159914497981 0.153510783428749 0.162627855629198 0.162529188363566 0.160728111616462 0.163604408081515 0.178834626524806 0.164348781508769 0.159359653059858 0.161227269267362 0.165693895580625 0.167434490029545 0.174369549282204 0.166464248006055 0.161234831777396 0.177658466431129 0.159850869207309 5 5 - 16846716 16847678 16847349.273 16846379 16848467 - gene protein_coding_gene TRUE TRUE AT5G42100.1|AT5G42100.2 glycosyl hydrolase family 17 protein encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd Identical to Putative glucan endo-1,3-beta-glucosidase 10 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 10) ((1->3)-beta-glucanase 10) (Beta-1,3-endoglucanase 10) (Beta-1,3-glucanase 10) [Arabidopsis Thaliana] (GB:Q9FHX5;GB:Q3E8I9); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G32860.1); similar to hypothetical protein - potato (GB:S31196); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.295222053242874 -2.04950879013719 0.0660331790078783 1 1.8215425502105 15.4834527640194 -0.295222053242874 0.195535245934383 AT5G47710_at 6.30815710992916 6.30289571570395 6.90661668303074 7.42740052479647 7.23666879156683 7.51599411639898 6.38449127879923 6.56669780911816 6.18543196669203 6.26218600761284 7.22356229305659 6.87219643299202 7.3856207610532 7.34135048756185 6.64694353193697 7.08356976269496 7.40227324218774 7.0344927454095 6.5839677594577 0.196791656535294 0.188924132983251 0.198190871539156 0.195369592826665 0.196783654313273 0.200526491134022 0.193928686269866 0.194056192658549 0.195575902567874 0.197629720811009 0.189236641525593 0.198665026906925 0.187151244064498 0.186655244311416 0.192495098709200 0.190171390630014 0.207204975653647 0.186655244311416 0.192610190030019 5 5|0 +|/ 19347696 19348329 19348097.8 19346901 19348555 + gene protein_coding_gene TRUE TRUE AT5G47710.1|AT5G47710.2 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70790.1); similar to C2 domain containing protein [Brassica oleracea] (GB:ABD64985.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.211047323807917 -2.04745011329783 0.0662650625506983 1 1.81855319368318 13.5649217878508 -0.211047323807917 0.107023550663638 AT5G36090_at 1.62402373925827 1.31159477479609 1.52806971231783 1.38944502016128 1.74036648591104 1.39615759285510 1.21672056402680 1.50414548666748 1.31437110992904 1.83833532938938 1.58061678437908 1.18551126144205 1.16848949217309 1.11624917092868 1.46118815736168 1.16928574169110 1.02219448235576 1.59664667551107 1.62905106824629 0.270114083418946 0.263871282867271 0.282893487081564 0.266571502998698 0.276812993350937 0.263536327386448 0.277639968871175 0.266449515238230 0.278747200413535 0.264106034203891 0.263536327386448 0.276940948898470 0.263536327386448 0.274629400283579 0.263536327386448 0.263536327386448 0.264545328878740 0.277356480302671 0.274558812616718 5 5|0 +|/ 14206288 14207013 14206478.25 14206288 14207186 + gene protein_coding_gene TRUE TRUE AT5G36090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28010.1); contains InterPro domain Protein of unknown function DUF321; (InterPro:IPR005529) -0.203599901786794 -2.04683868025641 0.0663340803623542 1 1.81766556485110 2.90453636695851 -0.203599901786794 0.0975760571435341 AT5G60740_at 1.03642128705167 1.31650825068915 1.36633336318544 1.46816741858304 1.54685267433893 1.35704916765910 1.08797637910616 0.746006100528136 1.2870106294897 0.985898529406865 0.90161022299591 1.24211582552972 1.23268193284194 1.07572721478401 1.06631592053799 1.03667277512396 1.63101225266666 1.68060094395507 0.95328508641924 0.225248211609395 0.224940576149260 0.229521789851292 0.228805852693323 0.224823744268585 0.237576321921933 0.224429734087172 0.22806135347644 0.248513280634432 0.224558776897010 0.2228807831458 0.220051345966733 0.219929359056572 0.223517824741838 0.228007309382664 0.220157636606764 0.236293135405304 0.218829769223374 0.220853889855133 5 5|0 -|/ 24443398 24443979 24443651.778 24443298 24447495 - gene protein_coding_gene TRUE TRUE AT5G60740.1 ABC transporter family protein Identical to Putative white-brown complex homolog protein 29 (WBC29) [Arabidopsis Thaliana] (GB:Q9FF46); similar to ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G53390.1); similar to ATNAP12 (Arabidopsis thaliana non-intrinsic ABC protein 12) [Arabidopsis thaliana] (TAIR:AT2G37010.1); similar to hypothetical protein LOC_Os11g22350 [Oryza sativa (japonica cultivar-group)] (GB:AAX92830.1); similar to Lipocalin; AAA ATPase [Medicago truncatula] (GB:ABE87825.1); similar to ABC transporter family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47708.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.194464997413417 2.04615964565036 0.0664108083665629 1 1.81667991519013 2.39503443905588 0.194464997413417 0.08509432776301 AT5G38560_at 5.91015987373121 5.92540777413622 6.2634627459141 5.91101880833098 6.5030309855843 5.79522716573476 5.58628142919724 5.80025569443908 5.44642581990133 5.94485710446174 6.92652462422451 7.4241750053147 6.98076676413492 7.39567111916944 7.18105139308183 7.12398375133805 6.45706404785019 6.59285261167607 5.78608509645912 0.206428809822002 0.212187903265401 0.213174992955799 0.20701939124916 0.206080074284058 0.207082310424754 0.205072312857358 0.214876201782797 0.222454967387989 0.211313305545169 0.211775268020411 0.202157286967115 0.204078273643468 0.233566844444476 0.214984845102640 0.217430852211001 0.207643338835525 0.212388819995511 0.208003676753617 5 5|0 +|/ 15459479 15460212 15459908.1 15456479 15460394 + gene protein_coding_gene TRUE TRUE AT5G38560.1 protein kinase family protein similar to protein kinase [Arabidopsis thaliana] (TAIR:AT1G26150.1); similar to protein kinase family protein [Musa balbisiana] (GB:ABF70139.1); similar to Os01g0110500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041798.1); similar to protein kinase family protein [Musa acuminata] (GB:ABF70054.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.24115757406442 -2.04589470168693 0.0664407685819155 1 1.81629537055891 12.3298808120699 -0.24115757406442 0.141780303415309 AT5G64960_at 7.50376826811051 7.32146432703245 8.05135818879381 8.32628709838874 8.3967841097535 8.07537535178935 7.17671067646584 7.28044259245934 6.97623359522016 6.99794178121797 7.73422132971864 7.83032918782433 7.9867685870971 7.51272573565903 7.82689803262318 7.98376245431534 7.42763581167024 7.50601981824897 7.19966948272195 0.176336102112535 0.170273517486889 0.16757791946319 0.176943035587287 0.164968988173353 0.171581247974789 0.169255494543554 0.170686176791297 0.177343893816324 0.182694474513668 0.173373359637659 0.167553037996751 0.170962381010845 0.168747332404839 0.181278846386454 0.166748150069530 0.177378056927076 0.176250464007107 0.167996387534929 5 5 + 25974969 25975533 25975353.818 25972610 25976221 + gene protein_coding_gene TRUE TRUE AT5G64960.1|AT5G64960.2 CDKC;2 (CYCLIN-DEPENDENT KINASE C;2); kinase|CDKC;2 (CYCLIN-DEPENDENT KINASE C;2) similar to CDKC,1 (CYCLIN-DEPENDENT KINASE C,1), kinase [Arabidopsis thaliana] (TAIR:AT5G10270.1); similar to cyclin dependent kinase C [Solanum lycopersicum] (GB:CAC51391.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to CDKC,1 (CYCLIN-DEPENDENT KINASE C,1), kinase [Arabidopsis thaliana] (TAIR:AT5G10270.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); similar to cdc2MsC [Medicago sativa] (GB:CAA65979.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.191988043668865 -2.04446328922328 0.0666028550576264 1 1.81421811829716 15.1585205296148 -0.191988043668865 0.081700228893611 AT5G47370_at 7.86134867273256 7.92100219531962 9.27921667293103 9.51453289925583 9.36999281236701 9.35648076193981 7.97448091710628 8.45005525355276 9.56001409016605 8.10518184914793 9.66918759173275 10.0770274217253 9.66663097939013 8.99754518899302 10.4143227036169 9.79019806959202 9.37074556575683 9.01642692905275 9.3654038555875 0.163278185380942 0.156874202008564 0.157575830667306 0.152872340965650 0.149421258961863 0.153214271674080 0.169376235842357 0.157767639132107 0.163194098276225 0.172952492382271 0.152745975515326 0.152149918950140 0.152714720693605 0.154344212615187 0.151177038742705 0.149421258961863 0.162605962568747 0.160315794020757 0.155257607021642 5 5 - 19233716 19234412 19234018.636 19233539 19235136 - gene protein_coding_gene TRUE TRUE AT5G47370.1 HAT2; transcription factor homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. Identical to Homeobox-leucine zipper protein HAT2 (Homeodomain-leucine zipper protein HAT2) (HD-ZIP protein 2) (HAT2) [Arabidopsis Thaliana] (GB:P46601;GB:Q546H4;GB:Q9LVS2); similar to HAT1 (homeobox-leucine zipper protein 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17460.1); similar to homeobox-leucine zipper protein, putative [Brassica oleracea] (GB:ABD64984.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain HD-ZIP protein, N-terminal; (InterPro:IPR006712) 0.199512418289905 2.04427930692534 0.0666237153619608 1 1.81395116493459 18.0336190170838 0.199512418289905 0.092432219428892 AT5G56190_at 8.36119514978361 8.58772870361093 9.54765323436136 9.24048660726436 9.7046999774915 9.1257672014954 8.58717452774685 8.52005647020581 7.98245028878129 7.61716790184293 9.07096933267905 9.04715085083497 8.99388275316268 9.14467878158278 8.57047655007994 9.02733529905752 8.80005970746009 8.81317689234157 7.60801976059139 0.154743378721731 0.146572869307891 0.151666276892293 0.150879155015922 0.155201291210100 0.155586091756706 0.151800245210912 0.156342115198636 0.167996702513782 0.160156418267708 0.145800017557169 0.143643141940439 0.151739351325482 0.152131994311668 0.149348812047988 0.143643141940439 0.174357555530002 0.155962435151721 0.164048614541853 5 5|0 +|/ 22761422 22762106 22761882.333 22759231 22762403 + gene protein_coding_gene TRUE TRUE AT5G56190.1|AT5G56190.2 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G55680.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G13340.1); similar to Os02g0721600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047961.1); similar to WD-40 repeat [Medicago truncatula] (GB:ABE85775.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.221936360258252 2.04397652001282 0.0666580593910034 1 1.81351184913526 17.2940180279808 0.221936360258252 0.120560463918114 AT5G48950_at 2.12513162094786 2.51784190535646 2.15337380871048 2.44320863043231 2.13974458894901 2.22606047569612 2.00296864315908 1.96960301761573 2.46344591704235 2.64459234627821 2.85622270285238 2.39545463789562 2.85455480226642 2.35449826390755 2.31896029929593 2.77716728375464 2.59361883194612 2.44290978781714 2.54900142031766 0.218968435374588 0.219432174715277 0.223180203238053 0.224276701399801 0.225088874231114 0.216987418803154 0.219800155069534 0.225237898262680 0.218650902264838 0.230670674620802 0.214805862945780 0.215749311420311 0.218245115980494 0.217850529669617 0.220575480534424 0.221665199610930 0.224798525099138 0.222304119813119 0.224048091805102 5 5|0 +|/ 19863444 19864460 19863752.7 19863379 19864661 + gene protein_coding_gene TRUE TRUE AT5G48950.1|AT5G48950.2 thioesterase family protein similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G48320.1); similar to Os05g0137700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054588.1); similar to Os03g0691400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050954.1); similar to SrfB or ComAB [Symbiobacterium thermophilum IAM 14863] (GB:YP_074800.1); contains InterPro domain Phenylacetic acid degradation-related protein; (InterPro:IPR003736); contains InterPro domain Thioesterase superfamily; (InterPro:IPR006683)|similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G48320.1); similar to Aromatic compounds catabolism protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] (GB:YP_817560.1); similar to Os03g0691400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050954.1); similar to hypothetical protein HD0042 [Haemophilus ducreyi 35000HP] (GB:NP_872668.1); contains InterPro domain Phenylacetic acid degradation-related protein; (InterPro:IPR003736); contains InterPro domain Thioesterase superfamily; (InterPro:IPR006683) -0.194545888617423 -2.04062455427871 0.0670393769618883 1 1.80865011093695 4.76050153007324 -0.194545888617423 0.0859699078182956 AT5G65760_at 8.18620562509771 8.17272181923105 9.11912263752819 9.03877567887071 9.45380956871125 9.09711997021016 8.16711003292374 7.90139361400882 7.51919951577282 7.62655269384562 8.72970137321402 8.51365496677248 8.69159376446592 8.56850596354673 8.64682323900651 8.76246262328857 8.76557160751826 8.61969684703208 7.78589522873898 0.127310766258943 0.131713646374985 0.129952003448889 0.129413749962338 0.132182572531097 0.132610726722169 0.129146914902399 0.138847910218465 0.151034544909029 0.142464749420843 0.129735657328897 0.129025251033008 0.127310766258943 0.127310766258943 0.133134120811621 0.127310766258943 0.135935695642951 0.132661798286371 0.133920427202706 5 5|0 +|/ 26327049 26327998 26327553.25 26325479 26328251 + gene protein_coding_gene TRUE TRUE AT5G65760.1 serine carboxypeptidase S28 family protein similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT2G24280.1); similar to Os01g0767100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044360.1); similar to PREDICTED: hypothetical protein [Gallus gallus] (GB:XP_425654.2); similar to Os06g0647400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058206.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S28; (InterPro:IPR008758) 0.189322743912728 2.04034332079586 0.0670714631763235 1 1.80824234416371 16.7950992571017 0.189322743912728 0.0782525045372432 AT5G14950_at 7.14680989682442 7.53163920276641 8.17375009086177 8.34781895116426 8.47655009384719 8.05567787050091 6.93309482253616 6.92230276272322 6.65236389384916 5.78873968190593 7.13321597447571 7.49771798909788 7.4796062729095 7.45351601115325 7.14929919393706 7.54768206200975 6.73751805780952 7.77144860648144 5.63575212449329 0.193053603516145 0.190334591557126 0.196526032586035 0.198410149829771 0.202593510683527 0.202436802762421 0.192555079512565 0.194088760467078 0.210393460298962 0.198151819202794 0.196087015935423 0.191435060547515 0.190227603839739 0.198266924700760 0.196866360522561 0.189078930470496 0.211532942362309 0.196275031319571 0.214526894416532 5 5 - 4837522 4838060 4837856.091 4837155 4841945 - gene protein_coding_gene TRUE TRUE AT5G14950.1 ATGMII/GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans. similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G66150.1); similar to MGC80473 protein [Xenopus laevis] (GB:AAH72937.1); similar to Glycoside hydrolase, family 38; Galactose mutarotase-like [Medicago truncatula] (GB:ABE79912.1); similar to PREDICTED: similar to mannosidase, alpha, class 2A, member 2 [Danio rerio] (GB:XP_689538.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Glycosyl hydrolases 38, C-terminal; (InterPro:IPR011682); contains InterPro domain Glycoside hydrolase, family 38; (InterPro:IPR000602) 0.207204710753915 2.03952757553785 0.0671646142322948 1 1.80705969802384 14.3843900052699 0.207204710753915 0.103202619620259 AT5G48390_at 0.84965307183532 1.13389146434441 0.894641745397217 0.499369759447717 0.509025992985904 0.667594559590009 0.90277254978431 0.863321203950767 0.908593085877362 1.16915651736536 1.54846164769851 0.817631281628846 0.55800415869918 0.911067053206937 1.55307560479469 0.980137965777077 1.75621964318690 1.15646483735992 1.31195311989482 0.207480180331511 0.207114807096031 0.21093227875311 0.204918267623131 0.206587576990861 0.205853167519095 0.211936858432254 0.206602954330855 0.217202929124023 0.205839702363341 0.205445964137003 0.210463837983792 0.205779716741025 0.208571086071260 0.213566482474088 0.205919150671909 0.208782022946398 0.210731815409583 0.211889153123353 5 5 + 19632060 19632436 19632218.818 19629304 19632589 + gene protein_coding_gene TRUE TRUE AT5G48390.1 tetratricopeptide repeat (TPR)-containing protein similar to tetratricopeptide repeat (TPR)-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82387.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.196412829184043 -2.03880600084374 0.0672471133719047 1 1.80601372842939 1.93505063429522 -0.196412829184043 0.0888719198516754 AT5G15900_at 0.238342832047503 0.14888877475227 0.310921744933064 0.458106151268406 0.340325115012940 0.802622542357113 0.0332388948994131 -0.109223728439844 0.60398179932318 0.441668512776617 0.435628265844123 0.80229669712246 0.319647834427958 0.0979710373099612 0.638918570031336 1.12423588490766 0.741820924891648 0.422530379781856 0.411609954721192 0.192713128862781 0.192513369636640 0.193729262409968 0.201655169806126 0.190811916973585 0.190811916973585 0.194395501985523 0.198140925064777 0.195363778182951 0.206703978229515 0.191917783553442 0.195606705103529 0.190811916973585 0.203834859671454 0.194016283956806 0.190811916973585 0.193120551293355 0.199779448304098 0.198576744118210 5 5 - 5189579 5190097 5189811.909 5189494 5192073 - gene protein_coding_gene TRUE TRUE AT5G15900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15890.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96865.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.196356109370682 2.03828190815376 0.0673070938026173 1 1.80525411056116 0.807220101635502 0.196356109370682 0.0888631550423209 AT5G59530_at 1.1195933794679 1.35837518119097 1.12414788312913 1.39343215080843 1.48363858775799 1.39933149470841 0.784980883611414 0.696739198115353 0.754555161404729 1.05048069763548 1.15627583375672 0.727186622869942 1.38060149309317 1.29698417756324 0.97731749318465 1.08022726701172 1.55948178206755 1.05235636300067 1.20708723271290 0.178389085143194 0.181256675812148 0.182992198252197 0.177980852370334 0.181355402033203 0.177200745491459 0.173320500052477 0.17676300908396 0.17677959846666 0.176099940393930 0.185029614982804 0.172974603275262 0.172350982987521 0.183100963233610 0.181495420100730 0.174659679275158 0.185377802333797 0.173753116734509 0.180240183038137 5 5|0 -|/ 24011665 24012275 24011908.8 24011410 24012954 - gene protein_coding_gene TRUE TRUE AT5G59530.1 2-oxoglutarate-dependent dioxygenase, putative similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT5G59540.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.181501055096506 2.03816520214853 0.0673204572214353 1 1.80508496750465 2.24895229967511 0.181501055096506 0.0657664752111141 AT5G12480_at 6.12817870378428 5.85152443726171 6.24689745982093 6.13067297422482 6.74786312918879 6.14571590540169 5.01486627134383 5.04973181622496 5.06499587490544 4.60918360273944 5.76029824559001 6.09492590563649 5.40595660306029 5.68689563145804 5.58776029758522 5.92260393536872 5.57502622356831 5.4577242405596 5.14428906958695 0.221848087772011 0.222528633896343 0.232141865276644 0.233848970700634 0.235581366562586 0.231413316844023 0.226744718879972 0.218839103941851 0.228214043860309 0.219841748877748 0.228037208347481 0.228755217262942 0.217064006778946 0.23068100574713 0.221381551429244 0.225402132646469 0.217064006778946 0.223212869163238 0.222397174515684 5 0|5 /|- 4047887 4048385 4048164 4047518 4050536 - gene protein_coding_gene TRUE TRUE AT5G12480.1|AT5G12480.2 CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7); calcium- and calmodulin-dependent protein kinase/ kinase|CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) calmodulin-domain protein kinase CDPK isoform 7 (CPK7) similar to CPK14 (calcium-dependent protein kinase 14), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G41860.1); similar to CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G57530.1); similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to calcium-dependent protein kinase 4 [Capsicum annuum] (GB:AAX07129.1); similar to calcium-dependent calmodulin-independent protein kinase isoform 2 [Cicer arietinum] (GB:AAP72282.2); similar to calcium-dependent protein kinase 8 [Nicotiana plumba (GB:CAG27839.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Parvalbumin; (InterPro:IPR008080)|similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to calcium-dependent calmodulin-independent protein kinase isoform 2 [Cicer arietinum] (GB:AAP72282.2); similar to calcium-dependent protein kinase 8 [Nicotiana plumba (GB:CAG27839.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Parvalbumin; (InterPro:IPR008080) -0.217757325647837 -2.03652080278167 0.0675090149446742 1 1.80270211887654 11.2273755377050 -0.217757325647837 0.116583190691254 AT5G48430_at 1.38315128310649 1.26197424453105 1.12256063147046 1.29045714992193 1.37901773229331 1.67530660523152 0.846863207192848 1.65059602955760 2.05545014939075 1.26728799531065 1.31631087378943 1.55440608951486 1.11867235840706 1.65190359309417 1.73297300878523 1.37317741686151 1.29963894267079 0.975135243900126 1.95642982864977 0.211671128627489 0.206012354517105 0.209991550814240 0.205582125713899 0.205388647555465 0.205977168999584 0.213268604864371 0.212373868857403 0.205264342962862 0.222009077275767 0.212806707741746 0.204300921347057 0.206983391970756 0.206498079535374 0.208326381481665 0.211603359894215 0.212926075388844 0.216790377568854 0.213374777507396 5 5 - 19645121 19645690 19645432.182 19644938 19646389 - gene protein_coding_gene TRUE TRUE AT5G48430.1 similar to extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] (TAIR:AT1G03220.1); similar to putative xylanase inhibitor [Oryza sativa (japonica cultivar-group)] (GB:BAD87305.1); similar to Os01g0937200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045333.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.250000129614427 -2.03529171515771 0.0676502748851273 1 1.80092156703934 2.89499078474396 -0.250000129614427 0.152508850562277 AT5G50030_at 0.767075081301271 0.99972207231631 1.38811835869943 1.39902606039792 1.32559557977618 0.896700039546524 1.34262785674687 1.06899947882727 2.24169443417086 1.31419608365634 1.00677719085306 0.882976544928547 1.23683534741726 0.928750559347231 1.8232423633993 0.837035804971687 1.51062442373868 1.56947703570977 1.43627182257708 0.209481626276483 0.211916681244049 0.200011978706500 0.206523725196541 0.203187272508516 0.202121646535946 0.205358228459172 0.199497250186086 0.227527386560330 0.201427598250725 0.208109232657503 0.203856382885481 0.203691067790144 0.212442615458011 0.202145578769048 0.200317655558294 0.20646136811383 0.203737653005886 0.202774854561707 5 5|0 +|/ 20371911 20372651 20372271.7 20371815 20372853 + gene protein_coding_gene TRUE TRUE AT5G50030.1 invertase/pectin methylesterase inhibitor family protein similar to APPB1, pectinesterase inhibitor [Arabidopsis thaliana] (TAIR:AT4G24640.1); similar to pollen-specific protein Bnm1 [Brassica napus] (GB:AAB48480.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.201827503597058 -2.03467870274069 0.0677208328084141 1 1.80003366376975 2.59274257708337 -0.201827503597058 0.0968282945367194 AT5G17150_at 2.06114971715020 1.78731493075502 2.18164039577677 2.51592638065408 1.79467565974763 2.30091863374519 1.84145732140079 1.64821655608568 1.80489501567107 1.88545664858964 2.62531923601823 2.33472883828125 1.90996002195339 2.09809707802986 2.04566372892685 2.17993030581819 2.43390437846867 2.30276015360353 1.76706946117004 0.167117557062693 0.16964420600108 0.165250603026710 0.170178554217950 0.168585497134170 0.159315356381576 0.170144775850804 0.159315356381576 0.164070539471121 0.16434885453436 0.168041335128965 0.164745765919462 0.160895531737188 0.160592827088606 0.169838699884100 0.163944805280899 0.169393736339168 0.175743791281794 0.159315356381576 5 5|0 -|/ 5638901 5639569 5639279.8 5638872 5639594 - gene protein_coding_gene TRUE TRUE AT5G17150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G17120.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525) 0.220390802972112 2.03461338015733 0.0677283555412894 1 1.79993905488052 4.04663037080496 0.220390802972112 0.119940310114617 AT5G41240_at 3.11753316665946 2.60779248156624 3.71622504056822 3.61429516551317 3.7455655977429 3.65175010151807 2.95212985349328 2.96999939704642 2.62822304435221 2.55105315953035 2.79339706019467 2.80057757146478 2.86328987781750 3.07022984149588 2.71008020954065 3.18164032820536 2.9595619979131 3.1349712364458 2.16892658913459 0.225083604113215 0.226409886616091 0.23911531022907 0.229201668024359 0.240521144763394 0.238789459655078 0.22431588514902 0.226183732945974 0.229211089345627 0.22962623349848 0.22431588514902 0.229214137899183 0.225977626500033 0.232316149478617 0.23189995964159 0.22431588514902 0.254466509603936 0.227488514116588 0.233567273960209 5 5|0 -|/ 16516785 16517637 16517121 16515383 16518086 - gene protein_coding_gene TRUE TRUE AT5G41240.1 ATGSTT2 (Arabidopsis thaliana Glutathione S-transferase (class theta) 2); glutathione transferase Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTT3 (Arabidopsis thaliana Glutathione S-transferase (class theta) 3), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41220.1); similar to glutathione S-transferase GST 23 [Glycine max] (GB:AAG34813.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.197775776087345 2.03367690973775 0.0678362886222195 1 1.79858286163901 5.99122107370869 0.197775776087345 0.0914649043854453 AT5G35370_at 5.14983064616692 5.58052696681017 5.98696329375952 6.51179807836899 7.16802701645054 7.277528016808 4.20838555587913 4.03645738974223 5.04686205763374 4.9895774928941 4.96264715003681 5.06662406447908 6.18015633325832 5.69393921499552 4.53040986821166 5.56260791541697 5.8774919929817 5.26408606811038 4.9016080614977 0.193086767006126 0.189320626565176 0.191980082116815 0.187066628714146 0.200863492058808 0.208325033472921 0.192707179619769 0.198615405624218 0.193512636150713 0.188269966281976 0.186468128905822 0.191674959971191 0.187271313794532 0.188470438088855 0.189168700878762 0.186468128905822 0.204196212835794 0.187705818657060 0.189632610110072 5 5 - 13605802 13606326 13606026.636 13605663 13608501 - gene protein_coding_gene TRUE TRUE AT5G35370.1 carbohydrate binding / kinase similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to Os02g0767400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048231.1); similar to D-mannose binding lectin family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99625.1); similar to Os09g0454900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063354.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.222539435617898 2.03284625617698 0.0679321612275801 1 1.79738011291403 10.9257368854706 0.222539435617898 0.122673742692498 AT5G53880_at 7.32614267268294 7.803125237963 8.09566521326334 7.96487865136926 9.77753330024825 9.02758766071019 8.26653487695826 8.09155794885449 8.9500146843342 9.54684845818032 11.2068804586663 10.9850892431004 10.3459027905011 10.5761973370995 10.9693959341254 10.4705046289121 9.31707966501518 10.3700031650661 9.53898910091527 0.191890483620145 0.185923363673667 0.182044197000051 0.203716858174236 0.173659757226105 0.172956816336744 0.179289006772389 0.182929272063737 0.180677800275672 0.174851485239034 0.178165169372462 0.177828009806841 0.176024491435972 0.181030902835992 0.178488775819685 0.177168526817649 0.185748045741922 0.174809731241801 0.173881580315389 5 5 - 21890340 21890397 21890355.455 21890020 21890529 - gene protein_coding_gene TRUE TRUE AT5G53880.1 unknown protein 0.255214700106441 2.03176023247433 0.0680577005721781 1 1.79580788509130 18.2318360622332 0.255214700106441 0.158385474855980 AT5G66980_at 1.40435102800834 1.42893625047188 1.41414039844386 1.69075883308448 1.42337195979106 1.74201937724254 1.34048350409203 1.54391768313044 1.88951826636556 1.99961398858874 1.73349943186189 1.54599119500720 1.62181567326673 1.55879154486698 1.42090357787428 1.85414106380005 1.62871906345727 2.11633127950085 1.9914817578518 0.169181474110056 0.166188530257476 0.171133721815434 0.163566444124576 0.172555876694429 0.164904044635331 0.164706310628679 0.165197184241740 0.163872348756031 0.172231932360537 0.169252706901787 0.166796951158065 0.163566444124576 0.173235046861233 0.166973346695911 0.169970178740973 0.175199505216413 0.170829686569641 0.165682330429671 5 5|0 +|/ 26759293 26759992 26759658.1 26758789 26760052 + gene protein_coding_gene TRUE TRUE AT5G66980.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to Transcriptional factor B3; Cupredoxin; TonB box, N-terminal [Medicago truncatula] (GB:ABE81225.1); similar to Transcriptional factor B3; Cupredoxin [Medicago truncatula] (GB:ABE81219.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.190337046986627 -2.0305881814849 0.0681934291945185 1 1.79411147954321 3.32111176660297 -0.190337046986627 0.0811779180908303 AT5G65990_at 7.21091640020701 7.48075108046674 8.41596661689906 8.5673255103717 8.3390015409571 8.45075658873216 8.20020169451523 8.82657450009539 6.94702628646272 7.46239740430649 8.72393954260794 8.64025753267368 9.06530041073245 8.93770295741282 8.87156926617708 8.58215534589026 8.914214416063 9.14152791154813 6.96074925546483 0.195201055431385 0.182264240269155 0.180545300056221 0.183242953121057 0.166980545711543 0.186324478051033 0.172644765105649 0.168362943305965 0.200554832509983 0.175537482668200 0.173589799120293 0.171527155635669 0.175819178823950 0.171163480623715 0.184968056825991 0.172093610844830 0.196385374119253 0.179987175271811 0.173490403435180 5 0|5 /|+ 26413038 26413523 26413274 26412108 26413739 + gene protein_coding_gene TRUE TRUE AT5G65990.1 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT4G38250.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G42005.1); similar to amino acid transport protein (GB:AAB82307.1); similar to OSIGBa0158F05.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66759.1); similar to OSJNBa0017B10.14 [Oryza sativa (japonica cultivar-group)] (GB:CAE03099.2); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.222085108562256 2.03056564633782 0.0681960413568122 1 1.79407886627552 16.1779239440136 0.222085108562256 0.122435697867710 AT5G20090_at 10.6146128296169 10.6407912363967 11.3014325948916 11.3770587178834 11.1606271335702 11.1631996227646 10.3958776777716 10.6618967265666 9.92605378147724 10.2794390014301 11.1575697626326 11.0675041054398 11.1678851675672 11.0214512486200 10.7455264567934 11.1294946647703 11.0505616411360 10.9756058972948 10.2992978704397 0.0771102545451709 0.0772931550078446 0.0820210739389945 0.0789957298609123 0.0766780862734775 0.0773225254074842 0.0792465795196722 0.0790318282063227 0.101332347909226 0.079997918820851 0.084207814957587 0.0766780862734775 0.0771721327339673 0.0838908019736002 0.0797953454908603 0.0766780862734775 0.0826376230009057 0.082728487968536 0.0782809916379536 5 5|0 -|/ 6787557 6787958 6787708.75 6787004 6788656 - gene protein_coding_gene TRUE TRUE AT5G20090.1|AT5G20090.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14695.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22310.1); similar to brain protein 44-like [Zea mays] (GB:AAV28624.1); contains InterPro domain Protein of unknown function UPF0041; (InterPro:IPR005336) 0.171910282518463 2.03039053257867 0.068216342882162 1 1.79382544327240 21.5182937770064 0.171910282518463 0.0480759970226117 AT5G40070_at 0.547563221165026 0.924245207950014 0.578750076207473 0.609302010188615 0.639883783311947 0.646142010385399 0.924437439517836 0.788954000112537 0.820715831645562 0.815478471427138 0.65129675457104 0.756831346730276 0.84712841193201 0.759880466134306 0.706994734185197 0.718526927812305 0.845409033578878 0.7062919542496 0.848799790422706 0.232074518658461 0.230630547255923 0.227217319936616 0.231176104457201 0.229396128627335 0.227217319936616 0.227217319936616 0.229103512706278 0.230496170820910 0.233872632991067 0.227217319936616 0.227913082020726 0.230656399777456 0.233028919335152 0.230796015798007 0.229388389770361 0.239308477319050 0.236960505883165 0.227217319936616 5 5|0 +|/ 16056496 16056951 16056778 16056407 16056975 + gene protein_coding_gene TRUE TRUE AT5G40070.1 similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT5G41200.1); contains domain MADS BOX PROTEIN (PTHR11945); contains domain MADS BOX PROTEIN (PTHR11945:SF10) -0.182933041218622 -2.03005530325897 0.0682552230041941 1 1.79334032605170 1.49609787767869 -0.182933041218622 0.0694847700895907 AT5G54790_at 1.34301911047766 1.67631672767369 1.62493814645203 1.91114287559989 1.23944178061102 1.45902845886161 1.61421215849988 1.71864603550183 1.68846330101732 1.81125777475625 1.57366829838999 1.40354743616833 1.38265963750549 1.51613001788008 1.43080304960944 1.63953703775711 1.96772667771742 2.01965481726972 1.71964451242788 0.225979677144354 0.23056681892976 0.232505325443188 0.228004734884550 0.228867346092307 0.225979677144354 0.227257582741099 0.237516594498229 0.24185735289285 0.232343258793625 0.227028084108863 0.230670731136174 0.237035012331663 0.237262056691298 0.242033463096456 0.229907178338797 0.225979677144354 0.229490864470972 0.230283080221903 5 5 - 22272408 22272647 22272523 22271212 22272889 - gene protein_coding_gene TRUE TRUE AT5G54790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50930.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE91163.1) -0.194114158047266 -2.02936310382421 0.0683355707383299 1 1.79233872793948 3.25159536217854 -0.194114158047266 0.0868943280998998 AT5G48830_at 4.32713967374223 4.53113384032628 4.61912171602239 4.31076054483915 5.11116138663886 4.34454893715079 5.42738995507973 4.91313726382828 4.23664253684831 4.49888600020055 5.61658040104681 6.92400384717204 5.01703624725955 5.97118450976048 6.26703412311028 6.01997548867767 5.58751919310706 4.8196209060677 4.14569180310067 0.220451813555261 0.224311085285084 0.239659917979022 0.222634289583012 0.220959964689001 0.229012481862520 0.220306986086624 0.225840229901478 0.244747605220476 0.226029657436634 0.226834226306487 0.223004280701613 0.222923470790709 0.223806766301557 0.242799744898759 0.224196959984122 0.228161671094926 0.234583582366221 0.225887275578891 5 5 - 19817497 19818190 19817761.364 19817340 19820241 - gene protein_coding_gene TRUE TRUE AT5G48830.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22996.1) -0.268213197330913 -2.02806215748561 0.0684868201848985 1 1.79045664305724 9.73385389115765 -0.268213197330913 0.172087241423497 AT5G07560_at 0.561414461767878 0.498517842540552 0.197601020207961 0.647928913822845 0.355483045675063 0.18083358808955 0.486092466389269 0.722926540505105 0.433501248676243 0.291343344111736 0.339821741948144 0.483248217342816 0.599593864372986 0.707507995056629 -0.0720797269545061 0.740526111443197 0.391262580303001 0.367463981483975 0.84932810882393 0.205286767771902 0.201998538383371 0.204036047320704 0.208732943129425 0.201952650150948 0.208602561307428 0.205455509981643 0.202691647121057 0.205867152930708 0.206291981413311 0.203491966888216 0.203098762348192 0.212831581956982 0.208023694887257 0.209140856084384 0.205628275789106 0.205942821745321 0.210776156256309 0.201952650150948 5 5 - 2390563 2391014 2390837 2390208 2391076 - gene protein_coding_gene TRUE TRUE AT5G07560.1 GRP20 (Glycine rich protein 20); nutrient reservoir Lipid-binding oleosins, glycine-rich protein. similar to GRP19 (Glycine rich protein 19) [Arabidopsis thaliana] (TAIR:AT5G07550.1); similar to pollen coat oleosin-glycine rich protein [Sisymbrium irio] (GB:AAR15435.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.198781594275522 -2.02710610316904 0.0685981727789418 1 1.78907381274811 0.94104589962236 -0.198781594275522 0.0937285544084236 AT5G44740_at 1.93896838872106 2.42518745593135 2.68593571886154 2.42940869047611 3.15412541596020 2.92220985881456 2.22270162341454 2.31820977574148 2.13710467535356 2.60432006618010 3.01062939711844 3.09753567507132 2.67054832625365 3.11175960745105 2.88774708407499 3.22781486366614 2.68567124080182 3.3559321222047 2.85104828799356 0.218738320374987 0.217892770222147 0.222163398059464 0.212894341838567 0.219492250197107 0.217952005491197 0.230867048800218 0.224293482820133 0.223544492481790 0.217803767489783 0.220529002212462 0.221643037356313 0.218617351433934 0.220424310021667 0.219167500849975 0.227167654105036 0.215914854024197 0.221860769016062 0.222571220092331 5 5 - 18065139 18065988 18065461.364 18065011 18069106 - gene protein_coding_gene TRUE TRUE AT5G44740.1|AT5G44740.2 UMUC-like DNA repair family protein similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to putative DNA polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD87579.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126)|similar to REV1 (Reversionless 1), damaged DNA binding / magnesium ion binding / nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT5G44750.1); similar to Os01g0757800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044297.1); similar to putative DNA polymerase [Oryza sativa (japonica cultivar-group)] (GB:BAD87579.1); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126) 0.20682899750082 2.02532828533189 0.0688056898243112 1 1.78650306136742 5.28048293236811 0.20682899750082 0.104568805844538 AT5G30510_at 11.9327869422868 11.9702085787315 12.0763704213920 12.0866505621292 12.3150529367818 12.1026456161642 12.3060390687128 12.1729149337183 11.9222021978650 12.183945758986 12.6284253778826 12.7987697733643 12.4014667596360 12.5992870183758 12.9509531824173 12.7700993188683 12.5120729273448 12.5807438530726 12.1227459019530 0.0626322253590447 0.0618902125679752 0.0640244659918032 0.0618902125679752 0.0646480943498125 0.064528176092953 0.0655641229022896 0.0647200504485617 0.0694349548608714 0.0640891552869287 0.0665017730325852 0.0618902125679752 0.0624938345010248 0.063022636228164 0.0665438124875748 0.0618902125679752 0.0662394661707002 0.0655800351693811 0.063375828728908 5 5|0 -|/ 11636496 11637381 11636993.7 11636256 11638528 - gene protein_coding_gene TRUE TRUE AT5G30510.1 RPS1 (ribosomal protein S1); RNA binding similar to S1 RNA-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G71720.1); similar to 30S ribosomal protein S1, chloroplast precursor (CS1) (GB:P29344); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Ribosomal protein S1; (InterPro:IPR000110); contains InterPro domain RNA binding S1; (InterPro:IPR003029) -0.169528801569858 -2.02286612021897 0.0690940627754249 1 1.78294418048468 24.486096247142 -0.169528801569858 0.0438975814806956 AT5G56920_at 2.28349873749349 2.48788150424019 2.30266695489129 2.74723568440244 1.86874784297435 1.83530230884672 1.61013377145129 2.10502893502858 2.27088778311431 2.37560623529050 2.29646088296709 2.46207868482539 2.58949284733070 1.96074909063773 2.74291598094354 1.89143659821664 2.29928121687535 2.69228713458693 2.6282066279766 0.250430637318847 0.243237801446558 0.251071337849812 0.252122867941149 0.245237421806141 0.244805626732398 0.242773064901835 0.253072462517711 0.24609976162194 0.255953716391737 0.243100875369943 0.241001974391746 0.257516083916854 0.247997746800275 0.248518217848303 0.242048844038631 0.252924732290548 0.247103404545139 0.253196594728828 5 5 + 23042310 23042942 23042747.818 23042122 23043141 + gene protein_coding_gene TRUE TRUE AT5G56920.1 cysteine protease inhibitor similar to cysteine protease inhibitor [Arabidopsis thaliana] (TAIR:AT5G56910.1); contains InterPro domain Arabidopsis thaliana cystatin-related protein; (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) -0.219535667580130 -2.02175346355750 0.0692247514018896 1 1.78133646881682 4.55093097742024 -0.219535667580130 0.120574959599027 AT5G04460_at 5.34884938777186 5.25640293627319 6.61933804727502 6.09336908732713 6.59692211528153 6.34827865572826 5.2237389753849 5.23142770341058 5.66560206170603 5.21238328974143 5.76189942408646 5.79397777113933 6.09335626662892 6.19247400298621 5.67897945626174 6.29727210755131 5.60573790288565 6.1453610304636 5.57323577348003 0.176970190079843 0.18235401034353 0.171507969712791 0.168714747194704 0.181021918459894 0.175312522936214 0.174056197612123 0.184849393051552 0.18814242208794 0.172890073236265 0.168714747194704 0.172895422784616 0.173107618434019 0.176075039594649 0.179865086213909 0.169315868030818 0.188454643793898 0.170027453732983 0.174003138298703 5 5 + 1262794 1263469 1263049.455 1260010 1263863 + gene protein_coding_gene TRUE TRUE AT5G04460.1 protein binding / zinc ion binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27950.1); similar to Os09g0570500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063987.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31049.1); similar to Os02g0823300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048568.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.204420740542395 -2.02165060607703 0.0692368443945121 1 1.78118786429998 11.5547271736697 -0.204420740542395 0.101951433073665 AT5G37050_at 1.61181072800166 1.39166325376062 1.58890348510760 1.16219746428659 1.39410352733845 1.18514593613608 1.47799558629507 1.27156673028845 2.29011071460644 1.64026950680026 1.78558857059101 1.62577979817688 1.94308294086366 1.46565633539519 1.77838002389337 1.99576921791649 1.62970102393089 2.11355916860582 1.64127951909766 0.209987367118342 0.208937395764556 0.207379977910419 0.212518781769448 0.21020014640238 0.207644011505960 0.206118397447911 0.209939974611257 0.210506176237399 0.2114702892803 0.222529283555964 0.206118397447911 0.217566194837455 0.211151981236109 0.219610460450357 0.206118397447911 0.213217864721784 0.213286047303445 0.214786758472875 5 5|0 -|/ 14657742 14658616 14658288.4 14657740 14658651 - gene protein_coding_gene TRUE TRUE AT5G37050.1 similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G58440.1); contains domain SORTING NEXIN (PTHR10555); contains domain gb def: Emb|CAB87268.1 (PTHR10555:SF2) -0.200958958106923 -2.02156408394144 0.0692470183720828 1 1.78106286274131 3.21012811311337 -0.200958958106923 0.0974067327750896 AT5G02240_at 10.6716396600358 10.5748604875628 11.3863111430933 11.2983931424058 11.4631083024253 11.1235496493441 10.9664846283152 10.9299423999975 10.2781716573930 10.9061316752425 11.5496966084284 11.423441861594 11.2721977536462 11.5081119135612 11.4697619829984 11.2668935641786 11.3919384302444 11.5321653049625 10.1384221961819 0.0829102155328078 0.0822543630865108 0.0866356409411582 0.083687964855288 0.0825531254147335 0.0855160509904769 0.0829724809973459 0.0833599044990124 0.094202059407305 0.0817586580352567 0.0839204734747303 0.0821189707776276 0.0834396066066816 0.0850549400924527 0.0859457156339573 0.0816659293477746 0.0844966121649419 0.0834928636709235 0.0832605421099013 5 5 + 451833 452937 452403.273 451421 453155 + gene protein_coding_gene TRUE TRUE AT5G02240.1 catalytic/ coenzyme binding Identical to Protein At5g02240 [Arabidopsis Thaliana] (GB:Q94EG6;GB:Q9LZK8); similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT2G37660.1); similar to Os05g0110300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054439.1); similar to Os03g0822200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051733.1); similar to similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera watsonii WH 8501] (GB:ZP_00516553.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.178556408176401 2.02058197648155 0.069362601104847 1 1.77964412398831 21.9856283951762 0.178556408176401 0.0632848380387301 AT5G41540_at 1.31806611083868 1.12880648393640 1.91047152967116 1.45240633018757 1.72828208876333 1.54210315728201 1.32254013150052 1.00629592530539 1.05236291639894 1.36921328154506 1.38375031356231 1.50956387369027 1.20354966906291 1.57369226619314 1.21680112310567 0.854126385852965 1.56841168790387 1.54226975208333 1.24638489995329 0.197362829527579 0.193843400727881 0.202739163750095 0.197521366773488 0.194736204020918 0.202564161735317 0.199188558460197 0.207351402529670 0.199547899429498 0.201787609989839 0.193843400727881 0.196505248370492 0.200583659538923 0.203176183015794 0.204106882089332 0.199954286835206 0.198526798159443 0.197021080657419 0.204884007875645 5 5 - 16629891 16630398 16630232.091 16629887 16633291 - gene protein_coding_gene TRUE TRUE AT5G41540.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41750.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G40910.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41550.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.208014937795313 2.02034672499292 0.0693903143989972 1 1.77930432290720 2.71570863630108 0.208014937795313 0.106722395277852 AT5G66810_at 6.70848106384351 6.77811786966929 7.91002558455174 7.83675104137144 8.24823907619437 8.07123355676232 7.08763950733803 6.74891236877509 6.70063218774783 6.85341195329102 8.16455404758946 8.19652012792473 7.64033512167855 8.2192833208459 7.66666531659046 8.32511545843141 7.90780295040284 7.83556591608753 6.94404867648588 0.209824273245861 0.205862795974584 0.217041676840940 0.224231627856174 0.206026062236739 0.202629038742980 0.212518182263526 0.211448331631901 0.213644964944835 0.208561590456716 0.207145152107314 0.201948860858039 0.210328221289643 0.206261556888559 0.217095028273669 0.205254372029683 0.221654418460013 0.204589941176214 0.213611053420110 5 5|0 +|/ 26692892 26693608 26693229.4 26690152 26693830 + gene protein_coding_gene TRUE TRUE AT5G66810.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61150.6); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM74330.2); similar to Os10g0382300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064488.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595) 0.181419089854294 2.02021273310142 0.0694061036755872 1 1.77911078974192 14.8372639527059 0.181419089854294 0.0684136264427785 AT5G20885_at 5.20834642117719 5.60942603408449 5.72656118992745 5.84821898696886 5.57485223444555 6.78981763669138 4.60165125521743 5.9793172728024 4.37308782068322 3.98708724237149 6.68045516900314 6.66741887663838 6.62114268948076 6.74130438492767 6.5136556600284 6.43598572460397 6.25245434894428 5.35916072375635 4.2652838954611 0.165190739569517 0.167051016456521 0.165933664976076 0.168123058758814 0.165190739569517 0.169040661619929 0.172435894473667 0.175302968357171 0.189712593760766 0.177480750991052 0.174816388433170 0.165190739569517 0.172989661263751 0.172983164970990 0.165433302910397 0.171030843223644 0.179073356002398 0.178988800295927 0.179879811421090 5 5 - 7084147 7084623 7084425.818 7083967 7084736 - gene protein_coding_gene TRUE TRUE AT5G20885.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G43430.1); similar to RING-H2 protein [Medicago sativa] (GB:AAN32654.1); similar to Os04g0579200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053644.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.435316157312592 2.01908018294281 0.0695396955474292 1 1.77747517454405 10.9759906372534 0.435316157312592 0.326049410284255 AT5G36270_at 1.74441358085059 1.38871746401364 1.51991697327151 1.16260043333849 1.63029446086174 1.56457759156246 1.99602794535923 1.57029141965756 1.56358358002511 1.81070330131954 1.29341150730411 1.72784248017257 1.59832909491121 1.71982831408088 1.76420476569218 1.60392235999220 1.88124716507827 2.11965533151213 1.7197212147713 0.211606063214358 0.210897795596431 0.211723881673513 0.212304186238635 0.214827636643245 0.212625244351524 0.217368783811424 0.211231596316441 0.213728203276554 0.209670720841317 0.209918179488661 0.208548348999400 0.212335357370198 0.208548348999400 0.212361734187469 0.220975546812348 0.21426855892513 0.209402151470699 0.209465855209493 5 5 + 14310228 14310784 14310482.273 14310161 14310814 + gene protein_coding_gene TRUE TRUE AT5G36270.1 dehydroascorbate reductase, putative similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1); similar to dehydroascorbate reductase [Nicotiana tabacum] (GB:AAL71857.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) -0.21432322589296 -2.01852271208899 0.0696055416648367 1 1.77667021359628 3.27788389663853 -0.21432322589296 0.114760836394887 AT5G05550_at 4.42217006676863 4.53283123846088 4.77593614558466 5.05587076789698 5.98227813443022 5.48094967741884 4.20104329221254 4.28957834035104 4.38458099403334 4.49159755499274 5.10726947280624 5.17353062757691 5.03039018798288 4.87372131644501 4.71135699764450 5.3655435965399 5.05400356259086 4.82148563528997 4.87811920955888 0.221977794043827 0.216583340824851 0.218840855515154 0.216467019415191 0.239155673982373 0.227320895350995 0.224662821223748 0.231595155162253 0.218739977519769 0.221203905257691 0.220578466948795 0.218505861380878 0.216467019415191 0.218843337044207 0.216467019415191 0.216467019415191 0.228476838187243 0.219378056059933 0.218205112526599 5 5 - 1639824 1640376 1640180.091 1639033 1640607 - gene protein_coding_gene TRUE TRUE AT5G05550.1|AT5G05550.2 transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G11100.1); similar to 6b-interacting protein 1 [Nicotiana tabacum] (GB:BAB83610.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.204330397770291 -2.01773692588047 0.0696984549191919 1 1.77553572404014 9.6435465049594 -0.204330397770291 0.102348040162612 AT5G57770_at 2.25659190119053 1.49099355557897 1.77173666793339 1.78804516402434 1.31431674597092 1.77232189306751 1.7739100369185 1.7623573077229 2.29822473857278 1.59243843766414 1.85929020665626 1.82897309596223 1.89568102106706 1.92433380607015 1.79740971233215 1.47923419194276 2.04211838405396 1.96764825593344 1.82933836528660 0.230703645569261 0.223490821116798 0.224940333463697 0.223495577944352 0.226957716895765 0.226525112777527 0.232547549806547 0.220845916395713 0.225606340861806 0.222228725563603 0.221837949830852 0.236508886686153 0.221468302726254 0.224709848128663 0.225359348144174 0.220845916395713 0.233726061089572 0.235310484217142 0.230801200660453 5 5|0 -|/ 23418913 23419606 23419182.4 23418216 23420338 - gene protein_coding_gene TRUE TRUE AT5G57770.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G63300.2); similar to OSJNBa0067K08.21 [Oryza sativa (japonica cultivar-group)] (GB:CAD41244.2); similar to OSIGBa0092E01.13 [Oryza sativa (indica cultivar-group)] (GB:CAH67518.1); similar to Protein of unknown function DUF828, plant [Medicago truncatula] (GB:ABE80297.1); contains InterPro domain Pleckstrin-like, plant; (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant; (InterPro:IPR008546) -0.249626945544565 -2.01742539222004 0.0697353236548486 1 1.77508599094954 3.61928579143093 -0.249626945544565 0.154427312348769 AT5G53770_at 3.02556746768404 2.90336398416674 3.50261806349718 3.51082547440488 3.94576375365388 3.51499759700211 2.78195691412633 2.90050014773624 2.77297805972366 2.43192682237907 2.92251167739967 3.30962386651525 3.31545971982536 3.13234978248699 3.25758561202117 3.20763234267806 3.5228770687609 3.4630853082752 2.79302282998078 0.219106041411457 0.222706227481751 0.225184748677593 0.235019891226114 0.227666452684260 0.231013754832650 0.219067469434690 0.222312345254936 0.230217686690964 0.223796278425899 0.220312768551675 0.223567128188657 0.227301268617949 0.222496971885496 0.222902078021842 0.219282184612400 0.219478442991744 0.222367487104429 0.222856955583728 5 5|0 +|/ 21846352 21847060 21846684.6 21843882 21847209 + gene protein_coding_gene TRUE TRUE AT5G53770.1 nucleotidyltransferase family protein similar to MEE44 (maternal effect embryo arrest 44), nucleotidyltransferase [Arabidopsis thaliana] (TAIR:AT4G00060.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71308.1); contains InterPro domain PAP/25A-associated; (InterPro:IPR002058); contains InterPro domain PAP/25A core; (InterPro:IPR001201); contains InterPro domain DNA polymerase, beta-like region; (InterPro:IPR002934) 0.188372726446632 2.01670076685325 0.0698211509866386 1 1.77404001981858 6.22688246342051 0.188372726446632 0.0801699022435007 AT5G22900_at 0.72131035945157 0.52108170100438 0.698121280654055 0.650755270995405 1.01428570075439 0.913471914895783 0.592033265817687 0.477917018201113 0.664904144093016 0.504342861212506 0.968636252268022 0.814024546752893 0.764259574873241 0.692776869755577 0.892278526289308 0.726503916671765 0.583772472088126 0.510696645257956 0.459862002047096 0.208913598556180 0.207332428557217 0.209538933470025 0.211434985115352 0.203822640506666 0.204216348338233 0.204784282413843 0.203822640506666 0.211609069567738 0.208495065082298 0.206170401097844 0.203822640506666 0.203822640506666 0.215160214184983 0.207774018720887 0.204732790777571 0.223236083590345 0.207898009966207 0.203822640506666 5 5 + 7659295 7659814 7659487.818 7657227 7659871 + gene protein_coding_gene TRUE TRUE AT5G22900.1 ATCHX3 (cation/hydrogen exchanger 3); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX4 (CATION/H+ EXCHANGER 4), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G44900.1); similar to Na+/H+ antiporter-like protein, putative [Medicago truncatula] (GB:ABE89964.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.169152671035810 2.01646761676441 0.0698487872460557 1 1.77370350722115 1.34219953211121 0.169152671035810 0.044296920954516 AT5G64180_at 7.42313904462368 7.73554773603299 8.6553028837289 8.76745666355481 8.92866136358848 8.60700920092442 7.6778600020154 7.49492960319684 6.94021964304349 7.34636529060718 8.5485340476977 8.05877764664265 8.45997333269524 7.89720312154852 8.1133519409541 8.21159338472238 8.60779991224804 8.39543043719608 7.34829387243776 0.152797245413099 0.147925814210056 0.151353409859975 0.147426337676295 0.148543624567833 0.152401638575625 0.148294765274695 0.158489849998881 0.180552329796846 0.156171120195272 0.149180011136511 0.154295659513541 0.143556602461846 0.161620015372796 0.155409286352711 0.153922616694035 0.148316270445029 0.152074258565363 0.164532488229662 5 5|0 +|/ 25694391 25695370 25694866.5 25694306 25695583 + gene protein_coding_gene TRUE TRUE AT5G64180.1 similar to Os12g0502100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066826.1) 0.192029019192501 2.0138333809626 0.0701617489355551 1 1.76990249611994 15.9103429355378 0.192029019192501 0.0860242367069726 AT5G22890_at 1.32176365973007 1.14624099309171 1.64595375448769 1.43088350569881 1.16313601878850 1.08786971415858 1.32242612870999 1.04043886717149 2.05842145625886 1.78673153442305 1.20804848874547 1.63494363687671 1.50680137256740 1.76290495476541 1.61441765917060 1.31597516492211 1.72953652795892 1.68899012173399 1.67044573064009 0.181003381893124 0.183453750061541 0.190351427972769 0.184032026349910 0.183433723518277 0.179532233504636 0.181895967109774 0.187897237932539 0.201438612005315 0.184969232325697 0.191650212454281 0.182584064682717 0.186724794959974 0.185375121424812 0.18151334695404 0.179532233504636 0.179820128287523 0.187717203873331 0.179532233504636 5 5 - 7653599 7654053 7653857.182 7653260 7654727 - gene protein_coding_gene TRUE TRUE AT5G22890.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G34370.1); similar to OSJNBa0019G23.4 [Oryza sativa (japonica cultivar-group)] (GB:CAD39561.2); similar to H0806H05.6 [Oryza sativa (indica cultivar-group)] (GB:CAC09473.2); similar to Os08g0562300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062519.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.181530823545487 -2.01305300019522 0.070254714998403 1 1.76877683839044 2.96795665420456 -0.181530823545487 0.0697058623613783 AT5G11490_at 8.55168240454972 8.73229371706736 9.12149309988898 9.18791657554911 9.25797393425756 9.06517124615883 8.34895562485227 8.39170108137387 8.4565325727536 8.19908609636373 8.85687363727378 9.08020485074615 8.85733334890526 8.86760018842662 9.16945357381499 8.96492779836178 8.72602044343405 9.12453833601014 8.32971774810985 0.115862351353570 0.116580175796677 0.112221801651726 0.11699657020632 0.115437663593045 0.109487326224421 0.11229486102176 0.115931069450957 0.116380049751216 0.118267752019063 0.112226170185623 0.108033066785095 0.113838514524053 0.111012097151498 0.108033066785095 0.111750300395599 0.117656906741162 0.113175108601053 0.120320541446931 5 5 + 3675313 3676084 3675652.727 3671819 3676310 + gene protein_coding_gene TRUE TRUE AT5G11490.1 adaptin family protein similar to beta-adaptin, putative [Arabidopsis thaliana] (TAIR:AT4G23460.1); similar to beta adaptin-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61154.1); contains InterPro domain Adaptin, N-terminal; (InterPro:IPR002553); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain AP2 clathrin adaptor, alpha and beta chain, appendage; (InterPro:IPR009028); contains InterPro domain Beta2-adaptin/TATA-box binding, C-terminal; (InterPro:IPR012295) -0.170218652135637 -2.01223093996681 0.0703527713837509 1 1.76759124605972 17.4743057077275 -0.170218652135637 0.0477181015720431 AT5G56180_at 7.5082803663101 7.5477372406619 8.78955702114472 8.59324107364958 8.98604781380724 8.45542317530562 7.23308586926067 6.99162601908545 6.1505847129599 6.30422237079848 7.36864895091419 7.03177661299748 7.5826898878595 7.33820017734247 7.09732641720137 7.28635367896404 7.54795738423346 7.15662751341217 6.39794133523018 0.157491215685728 0.155935327270792 0.159260160785499 0.156042029769372 0.165866112304393 0.160869725519260 0.162339138030043 0.159936840338302 0.166860915876772 0.171573802904708 0.157925835444562 0.160720107140825 0.158500660014139 0.160702147460764 0.160458794020731 0.155738025501320 0.162496415148289 0.163458634016088 0.164099686136428 5 5|0 -|/ 22754774 22758121 22756663.889 22754551 22758257 - gene protein_coding_gene TRUE TRUE AT5G56180.1|AT5G56180.2 ATARP8 (ACTIN-RELATED PROTEIN 8); structural constituent of cytoskeleton encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. similar to ACT11 (ACTIN-11), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G12110.1); similar to OSJNBa0043A12.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE02800.1); similar to B0811B10.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86197.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Actin/actin-like; (InterPro:IPR004000)|similar to ACT9 (ACTIN 9), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G42090.1); similar to OSJNBa0043A12.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE02800.1); similar to B0811B10.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86197.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 0.207098728520488 2.01182812247817 0.0704008668584135 1 1.76701036397405 14.8058483478340 0.207098728520488 0.106672748048532 AT5G19520_at 0.67231925253574 0.83663053285023 0.550824521655363 0.803876882382967 0.579049593041122 0.53889090985759 0.784427553748364 0.620491668686412 1.20939297688925 0.763125853200033 0.86856930568375 0.871276190461722 0.988293526524644 0.872620027473263 0.723019723723234 0.314731384651668 0.52701074737262 0.83883454414796 0.677840474980625 0.200256370998767 0.197829362348874 0.195411647036101 0.191542251122138 0.188674927535436 0.186438308161742 0.18948382178881 0.190930988857313 0.191303123987075 0.203242551745753 0.189867098506839 0.201366799485932 0.195902823569668 0.194384523580517 0.194471859480189 0.190034960407499 0.196761440944457 0.205028804380847 0.197789147583577 5 5 + 6587955 6588718 6588186.364 6585423 6588938 + gene protein_coding_gene TRUE TRUE AT5G19520.1 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G12080.2); similar to putative protein T30F21.6 [Sorghum bicolor] (GB:AAL68849.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain MscS Mechanosensitive ion channel; (InterPro:IPR006685) -0.175905264153815 -2.01140776863719 0.0704510890446884 1 1.76640424252111 1.49031263081714 -0.175905264153815 0.0598282255989956 AT5G50210_at 8.57221414153635 8.73180909195553 9.35239481406268 9.34076635302291 9.49827246463955 9.3034478402244 9.59384014295783 9.54372486794896 9.00633165012718 9.19047894330121 9.94212956677035 9.8864690324638 9.92012671784089 9.87219764094235 9.64352263651831 10.1293600115958 10.0537049001709 10.0338565054629 9.03288274243254 0.121217976907633 0.116651429490047 0.119765503281127 0.115877603983819 0.118714253568746 0.125205645090967 0.121514757907119 0.114054944458595 0.136088681462747 0.124100157185615 0.115895663385918 0.115211134155055 0.117517189363012 0.121488457105764 0.117553677679867 0.116190961651268 0.120851849859981 0.121907567077366 0.127940491575552 5 5 + 20462254 20462879 20462553.727 20459873 20463217 + gene protein_coding_gene TRUE TRUE AT5G50210.1 QS (QUINOLINATE SYNTHASE); quinolinate synthetase A Quinolinate synthase (QS) activity of At5g50210 has been demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. similar to Fe-S metabolism associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G67810.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA97161.1); contains InterPro domain Quinolinate synthetase A; (InterPro:IPR003473); contains InterPro domain Fe-S metabolism associated SufE; (InterPro:IPR003808) -0.168781339811326 -2.01114657264350 0.0704823126319637 1 1.76602764095112 18.7479263754223 -0.168781339811326 0.0444834461336548 AT5G63070_at 0.714779115990705 0.85944603380312 0.621455425462336 0.423929852138157 0.837844395559023 0.737242839180077 1.42765004758983 0.603898215322225 1.09959272503743 1.13908857416493 0.6763982877849 0.941111947583836 0.799507513777834 0.726635681382017 1.24702251770821 0.679972712900132 0.616995853567917 1.0071664673994 0.651215325923187 0.196354771884950 0.191396720118718 0.191551491766138 0.189041440234474 0.189915565079254 0.195891163034599 0.195367791676573 0.193760758393183 0.196220021687777 0.190856014742104 0.195378265623684 0.197058318441491 0.201330657043622 0.194744801773923 0.187900902153642 0.192127508955814 0.197654558637632 0.20111501899307 0.196632427923915 5 5 - 25316455 25316860 25316657.636 25316404 25316886 - gene protein_coding_gene TRUE TRUE AT5G63070.1 40S ribosomal protein S15, putative Identical to 40S ribosomal protein S15-6 (RPS15F) [Arabidopsis Thaliana] (GB:Q9FML6;GB:Q4PSA0); similar to RPS15 (RIBOSOMAL PROTEIN S15), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G04270.1); similar to 40S ribosomal protein S15 (GB:O65059); similar to Os03g0798600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051572.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713) -0.244357171125248 -2.01059612848616 0.0705481557248765 1 1.76523405440164 1.67835586453312 -0.244357171125248 0.149733053877957 AT5G11910_at 8.14676996644237 8.44792971622369 9.24587228019412 9.33830444425364 9.04033762777316 8.82986369166971 8.19545068409536 8.18620997218577 7.27954296206279 7.8454117429947 7.83093216198696 8.19688988949904 8.18733900661191 8.52974990952876 7.14862715988764 8.25233384739066 8.36592621853687 8.35967691544112 7.63405791457895 0.198304291114888 0.188403928201385 0.194444610053689 0.189016724901180 0.189731793277918 0.187683348507214 0.187246157211623 0.195647152623515 0.223674266354174 0.197630528346830 0.198076408887457 0.193765240947154 0.189963326136044 0.189404785553786 0.209125455096752 0.186116134452552 0.209236802306472 0.202132881789371 0.200120294656767 5 5|0 -|/ 3836568 3837400 3836929.7 3836332 3838214 - gene protein_coding_gene TRUE TRUE AT5G11910.1|AT5G11910.2 esterase/lipase/thioesterase family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT3G47590.1); similar to esterase/lipase/thioesterase family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD44964.1); similar to Os01g0579900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043402.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) -0.178920582803838 -2.01033541406281 0.0705793620389564 1 1.76485820703886 16.5264782620993 -0.178920582803838 0.065584194383583 AT5G45220_at 1.18057820558919 1.23276268282346 1.26642100817557 1.52883239065963 1.05521112124865 1.21346430251461 1.29038249919305 1.44886918990669 1.39124453068389 1.48176037494925 1.46517241779082 1.17735107262521 1.37222674061295 1.50176206634674 1.43827913922179 1.03090434024470 1.22829605642261 1.40432469944720 1.56166970819195 0.209983646537193 0.202477929698637 0.206643268790522 0.207631674275583 0.206595521742577 0.207731915246201 0.209264290201478 0.204812526890499 0.231054879625682 0.205007001583174 0.213659910339300 0.202477929698637 0.210893904182025 0.209139524378577 0.214364673886644 0.202477929698637 0.210526638196433 0.205115057645224 0.210428243999766 5 5 - 18316162 18316950 18316578.364 18316153 18318296 - gene protein_coding_gene TRUE TRUE AT5G45220.1 Toll-Interleukin-Resistance (TIR) domain-containing protein similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to putative TIR-NBS type R protein 11 [Malus x domestica] (GB:AAQ93077.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) -0.176094993103170 -2.01027137673583 0.070587028993538 1 1.76476589341654 2.67982239394587 -0.176094993103170 0.0603822053824339 AT5G65430_at 10.7452213817914 10.7739305658694 11.2681824303207 11.3666430984381 11.6773786746269 11.4459570478204 10.3482753015658 10.4464940909435 11.2588705134925 10.6601413151872 11.8913915479939 11.3995544529225 11.6340575518558 11.5905302330656 11.5621614521115 11.5501509680752 11.0956866589078 11.6411001388619 10.8638239088018 0.0756860730728018 0.0734106871235942 0.0754315525807171 0.0746932969628107 0.0744892299732994 0.0792168605798272 0.0735831917578494 0.0740010861755966 0.0788019280428719 0.0734337360461156 0.0746878425486793 0.0749294093037996 0.0730972802066284 0.0781408965478775 0.0775799048245286 0.0743204733726593 0.0814647210555912 0.0738322079082217 0.0731013372365389 5 5 - 26165951 26167290 26166829.727 26165427 26167568 - gene protein_coding_gene TRUE TRUE AT5G65430.1|AT5G65430.2 GRF8 (GENERAL REGULATORY FACTOR 8); protein phosphorylated amino acid binding member of 14-3-3 proteins Identical to 14-3-3-like protein GF14 kappa (General regulatory factor 8) (GRF8) [Arabidopsis Thaliana] (GB:P48348;GB:Q9SWP7); similar to GRF6 (GF14 LAMBDA), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G10450.1); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 kappa (General regulatory factor 8) (GRF8) [Arabidopsis Thaliana] (GB:P48348;GB:Q9SWP7); similar to GRF6 (GF14 LAMBDA), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G10450.2); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.169698782114547 2.00976280792872 0.0706479458366254 1 1.76403280242681 22.2456058429061 0.169698782114547 0.0469873274722616 AT5G26930_at 3.08028983352844 3.05569262964983 3.24336568108657 3.78217171118255 2.56613981878519 3.07610770711225 2.27938304733223 2.89581976815792 3.26333666516823 2.99737809924174 3.26113556746257 3.3570423797492 3.45837119729052 3.2774172876624 2.97715167117604 3.43980752340588 2.99559589261814 3.17730935938023 3.25266329409961 0.219594051136321 0.224789658960606 0.229681222823424 0.241394419387826 0.232343577692034 0.232466630782378 0.229607383753403 0.222220875892445 0.220784187789833 0.221850455403109 0.227778857018586 0.229636239229627 0.233565780848020 0.221034517812326 0.232908415262340 0.220799547899162 0.237920278782925 0.231318260109194 0.224849275272315 5 5|0 +|/ 9479605 9480031 9479838.6 9479469 9480203 + gene protein_coding_gene TRUE TRUE AT5G26930.1 zinc finger (GATA type) family protein Identical to GATA transcription factor 22 [Arabidopsis Thaliana] (GB:Q8LC59;GB:O04636); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT5G49300.1); similar to zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87039.1); similar to Os05g0155400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054691.1); similar to Os03g0831200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051792.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) -0.260752571141629 -2.00965049035088 0.0706614059906797 1 1.7638709089365 6.20442371427753 -0.260752571141629 0.166975641014106 AT5G63520_at 6.49633841276581 6.65898399592326 7.09741175666491 7.21658406352546 7.98890727263131 7.18903837198504 5.94927685419981 6.23533525835845 6.80046198549391 6.13109534135753 7.52987897751092 7.43746275262735 6.67023684277119 7.17003645587501 7.04925455578468 7.35237532629451 6.53038451099332 7.00923165477922 6.69735403956191 0.235414576267894 0.217935221977764 0.221792756348307 0.224430350751511 0.221445319226722 0.228436652102098 0.225342795298317 0.217935221977764 0.225167495701678 0.226970600047504 0.220442208663889 0.217935221977764 0.226303014396503 0.220814619642812 0.224417246430793 0.220766858471288 0.238094304619750 0.223961234896768 0.228751999910196 5 5 - 25443536 25444260 25443793.182 25443403 25446338 - gene protein_coding_gene TRUE TRUE AT5G63520.1 similar to hypothetical protein sll0524 [Synechocystis sp. PCC 6803] (GB:NP_442809.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.245409515160503 -2.00877939562708 0.0707658798531601 1 1.76261544273505 13.6722735432821 -0.245409515160503 0.151091220656359 AT5G46670_at 2.36431332157985 2.09043341388428 2.64931173908065 2.99096251828386 2.12496860090317 2.50133104816945 2.30674254968849 2.37370178073135 2.67406626425338 2.72167679005149 2.30380838902467 2.01622486608567 2.63146748162163 2.17883647075151 2.32030235132541 2.09855794736284 2.65670582401269 2.36434638422105 2.08241307324813 0.209016795777859 0.202662778800662 0.204006895387224 0.204650607254090 0.209376413672511 0.211438773241699 0.216188829304173 0.203551159080074 0.215426379655362 0.203519594734485 0.209422294942252 0.204453062843860 0.202662778800662 0.211246921557339 0.203297907890144 0.202662778800662 0.210843829172812 0.207452534330118 0.208925718047133 5 5 + 18956690 18957241 18957034.818 18956268 18957266 + gene protein_coding_gene TRUE TRUE AT5G46670.1 CHP-rich zinc finger protein, putative similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55780.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424) -0.201950520187949 -2.00747770715824 0.0709222667272186 1 1.76073978429677 4.83222058328265 -0.201950520187949 0.100590423985756 AT5G53080_at 2.76337383340996 3.15532809000495 3.41161298977646 3.32503631674282 3.59679067852618 3.94160042720185 3.62588095348064 3.35864323044140 2.63669371347224 3.09902903581089 3.18505573873390 3.13163204994293 3.24260307077772 3.06067198389519 2.94146233917748 3.73746286773079 3.40226307200412 3.58292953661426 3.25911369839901 0.214935199666671 0.222589984078962 0.212023625610456 0.212172591836624 0.213405254139819 0.208624133650557 0.214715951660895 0.212910128803829 0.222807683161417 0.209233304180648 0.215795981158957 0.213316454039777 0.211715265315804 0.216699225364796 0.215927823283275 0.214624708946775 0.215073703523949 0.212200391819275 0.21102728373215 5 5|0 +|/ 21539754 21540256 21539983.9 21537739 21540492 + gene protein_coding_gene TRUE TRUE AT5G53080.1 kinesin light chain-related similar to kinesin light chain-related [Arabidopsis thaliana] (TAIR:AT3G27960.1); similar to tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] (GB:ZP_01466552.1); similar to TPR repeat:NB-ARC [Prosthecochloris aestuarii DSM 271] (GB:ZP_00592853.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.203319285792033 -2.00592012381773 0.0711098233827821 1 1.75849602930595 6.53917776407483 -0.203319285792033 0.102589954991175 AT5G03160_at 7.07678859046539 6.93407347773071 7.98632179268716 8.16828140209861 7.82758609328755 6.74805294446362 7.17313398075092 5.76888656939143 7.29467484213953 6.85478567718157 7.0291418470414 7.44756184621531 7.13532170655581 6.96939862559149 7.19004821184145 6.93143796890976 7.4017716010169 7.27731787070711 6.53355691387561 0.217788726923435 0.226346392362424 0.246581470378603 0.230580306476776 0.236283512887141 0.237098584806850 0.226877640982145 0.218367404273262 0.226157781336741 0.222431112751659 0.219774725619902 0.22015818936501 0.214447685040668 0.226903646295233 0.218480411527797 0.220388085842382 0.219259831509196 0.222149751994219 0.232085200003713 5 5|0 +|/ 751830 752617 752305.444 750108 752804 + gene protein_coding_gene TRUE TRUE AT5G03160.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock protein, putative [Arabidopsis thaliana] (TAIR:AT5G25530.1); similar to P58IPK [Lycopersicon esculentum] (GB:AAP41818.1); similar to Heat shock protein DnaJ, N-terminal [Medicago truncatula] (GB:ABE83449.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.413041203471260 -2.00544289950327 0.0711673814926298 1 1.75780870876755 14.2439351584263 -0.413041203471260 0.309123274769687 AT5G08010_at 5.81238589920301 6.11960617584602 6.94054973853684 6.89288482662463 7.55896402270667 7.42093426416447 6.58317696634501 6.46443370303703 5.68459757919574 6.26726340562218 7.26172682609082 7.2871166757381 7.06099373825286 7.02819191311796 6.66761833573711 6.98916508518559 6.84711721403719 6.8316265312402 6.7058799486579 0.16378987845419 0.161363293293303 0.164788671678531 0.170151144783085 0.162484085174915 0.165893625267511 0.164851700985463 0.171555813308648 0.175403523365729 0.171265182816249 0.176985983052912 0.162164351299147 0.165792744119766 0.168481645126937 0.166449545579371 0.161531594268126 0.168826561848940 0.171918352860548 0.161323978807506 5 5 + 2571074 2571565 2571352.545 2569607 2571735 + gene protein_coding_gene TRUE TRUE AT5G08010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61040.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99007.2) -0.176575544386527 -2.00387247981157 0.0713570987835369 1 1.75554737644074 13.3320877084331 -0.176575544386527 0.0623497531335581 AT5G59710_at 6.40853290443708 6.6633548429324 7.87796646193406 7.93172045341898 8.18812011470265 7.87596020119152 7.25769760678031 6.75930661287867 6.37936200399343 6.12369046273784 7.40629075317713 7.49104634243336 7.70077559391563 7.23740228502364 7.64305551869801 7.92973443022159 7.43530976444484 7.47345739693217 6.30676254283677 0.219568153878383 0.196600469871526 0.204419791576692 0.201355978485453 0.194836250511082 0.218738860966500 0.205493397138974 0.203798703599274 0.211872475860576 0.198096387656442 0.198306273616482 0.199352284852588 0.205596729507788 0.212745589278715 0.207852682690371 0.197754311130828 0.205623930951127 0.201606786787351 0.202057334591023 5 5|0 +|/ 24078003 24078938 24078302.5 24074633 24079144 + gene protein_coding_gene TRUE TRUE AT5G59710.1 VIP2 (VIRE2 INTERACTING PROTEIN2); transcription regulator Encodes a protein that interacts with the Agrobacterium VirE2 protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07705.2); similar to NOT2/NOT3/NOT5 [Medicago truncatula] (GB:ABE93791.1); similar to NOT2/NOT3/NOT5 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98742.1); similar to VIP2 [Nicotiana benthamiana] (GB:AAY15746.1); contains InterPro domain NOT2/NOT3/NOT5; (InterPro:IPR007282) 0.209849438765426 2.00281377539332 0.0714852649983408 1 1.75402328833948 14.2751185733487 0.209849438765426 0.111302687932725 AT5G66100_at 4.1456573853826 4.11056320589695 4.87445032108748 4.81485498875589 4.90239835871588 5.3148094921141 4.13830396948539 3.65737845878642 4.05490292613998 3.82923101158697 5.00902857009233 5.41126060053321 5.09889211595881 4.71849740330729 5.22328533291357 4.94796826410288 4.86814520016014 5.2123420213984 3.86626621772004 0.235894214402918 0.237199678448136 0.23110963081184 0.241705208781534 0.233666806349141 0.241797613187007 0.239243231803291 0.234828510961642 0.246230285204969 0.243474716412658 0.231486049497249 0.234116852620381 0.243564302494242 0.240958332691799 0.234770066607673 0.231325233070409 0.242277659346626 0.231290937057583 0.242751654774394 5 5|0 +|/ 26445815 26446929 26446152.889 26444715 26447232 + gene protein_coding_gene TRUE TRUE AT5G66100.1 La domain-containing protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G35890.1); similar to RNA-binding protein Lupus La [Medicago truncatula] (GB:ABE93453.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630) 0.208971447571823 2.00219803405860 0.0715599055901407 1 1.75313702790321 8.98379076771508 0.208971447571823 0.110288308146497 AT5G40010_at 2.39768325708324 2.69212270220611 4.31689634957523 4.0708205446903 2.27658833304157 2.34212613566105 1.77962551693764 1.51157129326325 1.881831676104 2.23492641126511 1.96455431169890 1.60959351552107 1.76713052809315 1.64403901038158 1.74651868164062 1.29525312719805 1.29817215966361 2.01830723601739 1.91164831511855 0.250206571723633 0.254028052878818 0.285693283995887 0.252795175397373 0.24396837938356 0.251491355831078 0.229776176368202 0.234041512663764 0.231118388041728 0.245421520816329 0.237945902291737 0.229776176368202 0.230545759441584 0.23139397886303 0.229776176368202 0.234053437437954 0.236331905320020 0.235590421629137 0.236033084299574 5 5 - 16037599 16038003 16037806.273 16037446 16038990 - gene protein_coding_gene TRUE TRUE AT5G40010.1 AATP1 (AAA-ATPASE 1); ATP binding / ATPase similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28580.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE78645.1); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.187910185454074 2.00038167443148 0.0717805119378704 1 1.75052330410070 4.51213670261031 0.187910185454074 0.081793945700539 AT5G08420_at 7.77423644741648 8.17496788889898 8.63709071830152 8.67991154351073 9.02960086775589 9.03001705068973 8.30913423683118 8.10483311900757 7.68872388482484 8.15058444086205 8.46701395713231 9.06291244535612 8.4807215152667 8.08121195629163 8.38245744350684 8.5324665680978 8.2913416629983 8.35311645096764 7.6949980692044 0.215888272688773 0.212459257158357 0.222122823338591 0.217895664768551 0.215907956379664 0.218455418693932 0.218944218402647 0.215608764755463 0.240196488222476 0.218374742801347 0.220344250614925 0.209755107037543 0.219703259005913 0.214475719418418 0.219721613105507 0.21098232045013 0.231639316526174 0.21939110186771 0.223769887149512 5 5|0 +|/ 2714836 2715999 2715166 2713414 2716180 + gene protein_coding_gene TRUE TRUE AT5G08420.1 similar to NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) [Arabidopsis thaliana] (TAIR:AT3G57150.1); similar to rev protein (42.9 kD)-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82278.1); similar to Os10g0452800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064737.1); contains domain Eukaryotic type KH-domain (KH-domain type I) (SSF54791); contains domain Gametocyte protein Pfg27 (SSF89162); contains domain SUBFAMILY NOT NAMED (PTHR12581:SF2); contains domain no description (G3D.3.30.70.210); contains domain FAMILY NOT NAMED (PTHR12581) -0.185429702935413 -1.9987974328935 0.0719734467715238 1 1.74824436965959 16.6180610081761 -0.185429702935413 0.078192836531664 AT5G28760_at 2.49198159328527 1.69293394669457 2.22324797995967 2.02903885789536 1.77596004859689 2.20566685890201 2.0030072051881 1.63945514898397 2.48188771057388 2.16538723073424 2.18137876610936 1.97223910443634 1.97058179197164 2.32074662553934 1.81794095831807 1.92778641192141 1.56240636758598 2.21304166122978 2.14860724840702 0.188117747575134 0.188988950763664 0.184634603583451 0.181500326134093 0.190332651915052 0.192561424380476 0.183630178395838 0.185836965095656 0.187103782198644 0.184684452414137 0.185704860881192 0.183730978756506 0.190387780136681 0.185385381488394 0.183149999180027 0.185586256105910 0.186667113859436 0.199633689067849 0.182527341147414 5 5 + 10788194 10788876 10788473.273 10786312 10788953 + gene protein_coding_gene TRUE TRUE AT5G28760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27160.1); similar to ring-infested erythrocyte surface antigen [Plasmodium falciparum] (GB:AAF15366.1); contains InterPro domain Protein of unknown function DUF287; (InterPro:IPR005048) -0.264610626032969 -1.99813221540035 0.0720546042572942 1 1.74728766835396 4.13819109200191 -0.264610626032969 0.172448982473741 AT5G12310_at 8.44151897877397 8.56750980796783 9.19167879512581 9.38083334714725 9.3661046849208 9.2970217937775 8.82114206985839 9.01858069581389 9.16428594559944 8.9983629085121 9.68066490429358 9.34471748828667 9.64575161560693 9.69471026242563 9.5291804884501 9.82287828151238 9.51675585148775 9.68301392310547 8.98493722333354 0.0857631667593018 0.0895336638287872 0.0845782369818486 0.0889038371208217 0.0854226681353318 0.088187710991144 0.0883647663857731 0.0875041400572498 0.0891913335511568 0.0878307027272191 0.0861419812791916 0.0833096542218168 0.0854598760006665 0.0837789658114201 0.0866257413986005 0.0844027542671977 0.0899552759774372 0.0867471746384904 0.0859851246449896 5 0|5 /|- 3980498 3981179 3980818.111 3980227 3982443 - gene protein_coding_gene TRUE TRUE AT5G12310.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G19430.1); similar to Os01g0954400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045432.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.171577414997498 -1.99790263272844 0.0720826335760368 1 1.74695751715113 18.3425010021954 -0.171577414997498 0.0534533307516243 AT5G25800_at 4.30683099336052 4.37608627667933 5.09477499524539 5.00651233560526 4.86441141271384 4.84799988493538 3.99571305243571 4.55434280862481 3.18867879861767 3.21895238041915 3.97177733959949 3.92763476642437 3.85437281698539 3.67202856491502 3.9407462479834 4.1841374181311 3.72166546264894 3.821792592034 3.74958926225191 0.245725574484775 0.241163268437505 0.243112228110578 0.240891515680645 0.245082797645067 0.245381266577098 0.240568183177072 0.245100815243437 0.253204196983929 0.241101321761328 0.245179117084575 0.239062647704219 0.240165566948352 0.245150053565794 0.244544216112665 0.246826288559906 0.239470334368066 0.247562693954864 0.242557003334395 5 5 - 8979778 8980476 8980171.8 8979625 8982876 - gene protein_coding_gene TRUE TRUE AT5G25800.1 exonuclease family protein similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to exonuclease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96019.2); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) -0.19949898710003 -1.99762512688785 0.0721165273864924 1 1.74655847035186 8.26708874404326 -0.19949898710003 0.0986446701198095 AT5G16320_at 4.5945048531625 4.79962681602256 5.92164573138458 6.07645676415473 5.80924957305461 6.52891191116132 4.34335084643076 4.51900556331096 3.96607806560468 4.27870037310206 4.98152958326097 4.75264094183015 5.16484953519026 4.9573331742143 4.80600733826852 5.23623703002553 5.37774279866182 5.31346075880629 4.59139966798046 0.231456708575960 0.227378118496621 0.233141637811585 0.225993392938035 0.228255990147325 0.239024259022122 0.227791930280473 0.229977732250200 0.249479094953444 0.226367783887468 0.222685013927291 0.226959047024670 0.232562361467632 0.225216161926994 0.227808439931500 0.222685013927291 0.224946634040135 0.248936550401146 0.229598760211478 5 5 + 5345362 5345869 5345673.182 5344505 5346022 + gene protein_coding_gene TRUE TRUE AT5G16320.1 FRL1 (FRIGIDA LIKE 1) family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004884 similar to FRL2 (FRIGIDA LIKE 2) [Arabidopsis thaliana] (TAIR:AT1G31814.1); similar to ABI3-interacting protein 2 [Medicago truncatula] (GB:ABE81461.1); contains InterPro domain Frigida-like; (InterPro:IPR012474) 0.229933842575814 1.99711556175449 0.072178803187403 1 1.74582578564485 10.0003195976326 0.229933842575814 0.135691844737112 AT5G45200_at 0.477394178165779 0.514003064438343 0.597348200182542 0.607057749172124 0.748094328524148 0.928414292109255 0.506887761221647 0.330780974157662 0.373788940447375 0.525053368973412 0.475892247943741 0.56768198688357 0.411136015925947 0.624224145883567 0.609383815907406 0.666217365313269 0.506727405401185 0.502197970057978 0.230025148987587 0.195689795407823 0.194736002326168 0.195900077306043 0.195185704662165 0.196446231195608 0.195711651669947 0.194771754022276 0.198659623247098 0.200216305665964 0.194716035284608 0.195675728209516 0.208829048474985 0.192478135173375 0.195899869026219 0.195289181331425 0.196210606491322 0.203938150162110 0.194450583549940 0.197927159524605 5 5 - 18301223 18301767 18301570.727 18301194 18307559 - gene protein_coding_gene TRUE TRUE AT5G45200.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G17060.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.167435297549315 1.99689077960685 0.0722062906448092 1 1.74550260359088 1.04960845448012 0.167435297549315 0.0441080237512912 AT5G11530_at 3.30409944987685 3.40961007447858 3.39176133541770 3.42772670733862 4.20156541134032 3.24992008557025 2.97384728350060 3.11717704521668 2.92688367432211 2.98483915952968 2.87700243493858 3.9217712205228 3.49142860348552 3.52663693144497 2.78222456545846 3.33455285651959 3.02502266115985 3.39180712596134 3.4632987484129 0.200849678110228 0.199611525090794 0.202885984117309 0.198969384003538 0.214222987320260 0.203413521427322 0.203435239775818 0.202118191141626 0.208832087348748 0.201256097325916 0.197535923177943 0.205593380953820 0.20088781428488 0.201214148403955 0.201448789473817 0.202025333905405 0.222462257890541 0.210468161519543 0.200667170192462 5 5 + 3700360 3700889 3700604.273 3695863 3701549 + gene protein_coding_gene TRUE TRUE AT5G11530.1 EMF1 (EMBRYONIC FLOWER 1) Involved in regulating reproductive development similar to EMBYO FLOWERING 1-like protein [Pisum sativum] (GB:AAX33635.1) -0.259750280237082 -1.99681612291553 0.0722154221991174 1 1.74539526865428 6.59386992110476 -0.259750280237082 0.167657573854287 AT5G37370_at 8.28664518201384 7.80204869522971 9.43138467841805 9.28414179803746 9.52097623561732 9.19066493910051 7.84074494261284 7.7900310092411 8.33193271792888 8.17478010426348 8.85289462834499 8.9033712355173 9.15010447852747 8.91979581539889 8.40942628163121 9.35034285169379 9.11750694271531 9.05144313863758 8.52689829742205 0.158418235131198 0.169913412469304 0.167373169133244 0.161113675700878 0.163169306665399 0.157557506361799 0.177551544904905 0.162401666759104 0.179410592120255 0.167610145611809 0.154733887735006 0.156385852715827 0.154733887735006 0.155567188562106 0.164824695994992 0.154733887735006 0.162083425438796 0.168410825812578 0.166891367629655 5 5 - 14830081 14830643 14830434.727 14829915 14833750 - gene protein_coding_gene TRUE TRUE AT5G37370.1|AT5G37370.2 ATSRL1; binding encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt. similar to pre-mRNA splicing factor PRP38 family protein [Arabidopsis thaliana] (TAIR:AT2G40650.1); similar to PREDICTED: similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B isoform 1 [Bos taurus] (GB:XP_587705.2); similar to Os05g0178900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054801.1); contains InterPro domain PRP38; (InterPro:IPR005037) 0.204132809263907 1.99560377278693 0.0723638610822705 1 1.74365248181144 17.3002785407487 0.204132809263907 0.105007493276966 AT5G60820_at 6.50791629532847 7.08252662740585 7.6543700970155 7.54621975979989 7.844610321344 7.91588575990477 6.025507054687 6.36242295093808 6.37513135770358 5.68085347912584 7.53276392609162 7.55220459254928 6.7561029390543 7.34793402386589 7.05135374716179 7.10858253350905 7.05783179470308 7.83367961438463 6.0108765649671 0.210657247891272 0.201788923731023 0.213864458556895 0.206080788383042 0.215409301925432 0.207634659119848 0.206860981138485 0.216275094055354 0.210650564320794 0.203230726978808 0.201815963622525 0.20394027090792 0.212236891449230 0.216951039549865 0.201788923731023 0.207193761298553 0.204854894606847 0.205086666547546 0.210342224407829 5 5 + 24487628 24488096 24487878.364 24486813 24488121 + gene protein_coding_gene TRUE TRUE AT5G60820.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G08139.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89663.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.213858860023865 1.99353451216952 0.0726178797833131 1 1.74067884478514 13.7686042484765 0.213858860023865 0.117430824520605 AT5G02050_at 3.6273394475363 3.74463115266004 3.75310977378875 4.17494455077123 4.01624193854291 3.08280427109994 4.10927862688868 4.77097460730008 3.28033408414074 2.89709499551672 3.77195100462660 4.20106709117574 4.42258157195688 3.95655667504906 4.46206719498501 4.04057491790453 4.0953297507689 3.89419290365625 2.99071629113649 0.230016813851680 0.228767832384362 0.226997580035173 0.234231589359910 0.222752989630009 0.237117094123584 0.227438104808338 0.228441676767205 0.236180376232483 0.228139566863132 0.222752989630009 0.229316766014388 0.229978712946646 0.228841098024209 0.222752989630009 0.223627253524758 0.229876934649151 0.228720730139951 0.222752989630009 5 5 - 403248 404007 403623.182 402984 404320 - gene protein_coding_gene TRUE TRUE AT5G02050.1 mitochondrial glycoprotein family protein / MAM33 family protein similar to mitochondrial glycoprotein family protein / MAM33 family protein [Arabidopsis thaliana] (TAIR:AT3G55605.1); similar to Os06g0326500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057529.1); similar to Os01g0143300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041996.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB16469.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428) -0.304200552299178 -1.99344296619624 0.0726291370749227 1 1.74054731703846 7.49070984392183 -0.304200552299178 0.212007811038983 AT5G13160_at 7.62639506008373 7.57676072252665 8.4430193172661 8.41021315707484 8.23711011472652 8.4950894505645 7.5975196158998 7.72464839971047 7.56287008741599 7.68572995757723 7.98309793278543 8.13043226361272 8.27210784928512 8.35485415377787 7.93752814082742 8.55064026074356 8.36695570056691 8.52335074448445 7.31629357203065 0.160085354145520 0.151896598971277 0.153601815097038 0.159531365820666 0.150718997192648 0.164501253749215 0.160560606292581 0.150330798026384 0.171304382681704 0.16116560247045 0.162710950390539 0.149093623850682 0.153146172823144 0.152265594046983 0.157625276977922 0.155899470721990 0.157870868861212 0.149612945261918 0.168934551822973 5 5|0 +|/ 4179079 4179646 4179378.2 4176582 4179888 + gene protein_coding_gene TRUE TRUE AT5G13160.1 PBS1 (AVRPPHB SUSCEPTIBLE 1); kinase Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. Identical to Serine/threonine-protein kinase PBS1 (EC 2.7.11.1) (AvrPphB susceptible protein 1) (PBS1) [Arabidopsis Thaliana] (GB:Q9FE20); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to Os02g0513000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046943.1); similar to Os04g0393900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052650.1); similar to putative protein serine/threonine kinase [Triticum aestivum] (GB:AAY26388.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.169930376220669 -1.99277298380453 0.0727115737292602 1 1.73958480067224 15.9070955229491 -0.169930376220669 0.0508247367785009 AT5G47730_at 6.19152186798446 5.84636674723114 7.48224699807901 7.64359632733916 7.1464741471816 6.34622025442024 6.16534208700384 5.2132416414205 5.70090406578910 5.07159100496881 7.34224876263917 7.47009269100595 6.53295284387503 6.98683791466197 6.61848723251718 6.19702944893225 6.18870323008492 7.03805337841415 5.34644072697434 0.226032473040412 0.212153908275656 0.212101416386972 0.210986195488932 0.218375589774408 0.217354335655866 0.212002472988438 0.214624416435533 0.240652494845135 0.233615440462049 0.225792830181208 0.210386298454008 0.208857889524979 0.215382657525403 0.217996207819119 0.208857889524979 0.236151174383128 0.217141521697463 0.214085646662256 5 5|0 -|/ 19351858 19352676 19352170.8 19351476 19354327 - gene protein_coding_gene TRUE TRUE AT5G47730.1|AT5G47730.2 SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative similar to SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein [Arabidopsis thaliana] (TAIR:AT1G55840.1); similar to polyphosphoinositide binding protein Ssh1p [Glycine max] (GB:AAB94598.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273)|similar to SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein [Arabidopsis thaliana] (TAIR:AT1G55840.2); similar to polyphosphoinositide binding protein Ssh1p [Glycine max] (GB:AAB94598.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251) 0.317857456179368 1.99238376304278 0.0727595048653822 1 1.73902569455047 12.5892659023377 0.317857456179368 0.225108613658092 AT5G03320_at 7.90278231171 7.70870802756442 8.63514831703791 8.58082009375852 8.71846509576608 8.37076556754406 6.31157826627743 6.5331628320659 7.19199248345189 5.99471899851244 7.71515163184531 7.42943527930056 7.32743929677727 7.67281891773075 7.10462507937467 7.319391318737 7.61543010293414 7.91369285037641 6.69877817154993 0.192658623813917 0.18242227716558 0.191752663167165 0.187937978034904 0.194057650644520 0.192683349528503 0.200098552912768 0.195675607837065 0.194411529302807 0.199231911203572 0.187469329898201 0.185241871360281 0.184202139304056 0.189183117066368 0.18862087584367 0.187152137097277 0.189723912594607 0.185169062168577 0.186615335253108 5 5 + 803738 804100 803892.545 802026 804397 + gene protein_coding_gene TRUE TRUE AT5G03320.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G09830.2); similar to Os02g0819600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048536.1); similar to protein serine/threonine kinase [Lophopyrum elongatum] (GB:AAF43496.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.185571365795052 1.99188842635751 0.072820546592319 1 1.73831421914747 14.9155511193685 0.185571365795052 0.07941890602158 AT5G50270_at 0.954262540120713 0.751755390218045 0.882024043037734 1.11319457735957 1.06861523753651 0.629828687346985 1.17550050082793 0.778353009085573 1.37080440433219 1.43072792820191 0.998298461016875 1.20310634022189 0.578466586160355 0.880265864892213 0.987543271171002 1.14503787891523 0.912430885814745 0.750775996602465 0.896028778677373 0.352970502838195 0.337572492155319 0.406199009010883 0.375483097405825 0.340530618447598 0.373318902821545 0.337572492155319 0.351774770232833 0.347231903330585 0.347894356311156 0.337572492155319 0.337572492155319 0.363698219410049 0.346053317576754 0.338465992864649 0.337572492155319 0.340084527671046 0.362075177705456 0.337572492155319 5 5 + 20475444 20475892 20475657.857 20474713 20476099 + gene protein_coding_gene TRUE TRUE AT5G50270.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G32375.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.212008275872048 -1.99178222352948 0.0728336405070351 1 1.73816168431037 2.00144726369322 -0.212008275872048 0.115404072470605 AT5G48750_at 0.525935098533332 0.557758021127636 0.200797141312080 0.641175569213796 0.352552025034913 0.581028333851271 0.823493851000223 0.525799657754411 0.689387480203129 0.595057687105275 0.231167349681586 0.377826097666381 0.725300093142545 0.194215533507931 0.841151308152782 0.260543949312060 0.212674642494916 0.391558251021184 0.346359029189690 0.210566621518659 0.215847978698778 0.216494784670390 0.213564846651778 0.210566621518659 0.215626829873427 0.22543151264748 0.212046361309349 0.213087581187065 0.215422796714496 0.215571632341686 0.211611538342459 0.216893035109944 0.210610367869387 0.214156858701737 0.210566621518659 0.216429001946876 0.211741917271767 0.215932926784984 5 5 - 19787279 19787801 19787578.545 19787278 19788045 - gene protein_coding_gene TRUE TRUE AT5G48750.1 auxin-responsive protein, putative similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G59070.1); similar to hypothetical protein 26.t00022 [Brassica oleracea] (GB:ABD65002.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) -0.200069264322043 -1.99111582946032 0.0729158516261128 1 1.73720464426911 1.00002048820602 -0.200069264322043 0.100277542160105 AT5G57170_at 8.00057224546731 8.41073415523364 8.22660888929445 8.2711639996377 9.2906482451656 9.13346299339242 8.2117376279987 8.24727481375203 7.44990252470407 8.01213524047752 8.5572271824198 9.14572645378112 8.72687615058605 8.64249798637458 9.18412215243466 8.93203346379632 8.37003856266088 8.36005547961349 8.26990579083604 0.155120090619425 0.149448701724086 0.148595483717395 0.15336060596335 0.156497085984836 0.154763892952570 0.151525971217 0.156940798460770 0.170697087659565 0.151651614979835 0.148336874075437 0.149452872284462 0.148200428149716 0.153863222876304 0.148200428149716 0.149776068095155 0.162879633590879 0.165180846377582 0.152318914777796 5 5|0 -|/ 23179437 23180340 23179975.889 23179300 23180506 - gene protein_coding_gene TRUE TRUE AT5G57170.1 macrophage migration inhibitory factor family protein / MIF family protein similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G01650.1); similar to Os06g0699500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058472.1); similar to Macrophage migration inhibitory factor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22330.1); contains InterPro domain Macrophage migration inhibitory factor; (InterPro:IPR001398) -0.183714567922987 -1.99077355035784 0.0729581113878594 1 1.73671313129629 16.7992603867248 -0.183714567922987 0.0766513093395584 AT5G58800_at 7.96966047791817 7.9165242378463 9.03407830963812 9.15818192687922 9.3572704704411 8.88324953461298 8.14155861060718 8.08595536363029 7.57821423538889 8.00464374189975 8.75663209801289 8.70939877990243 8.47328898444788 8.80340197371756 8.71123132654222 9.17914563298208 8.96758913705644 8.46149446229122 7.67347651316838 0.145146022210670 0.142707486449788 0.148834806287731 0.142707486449788 0.143154253791341 0.147461177846876 0.146049692956006 0.146424872409839 0.173246418302755 0.149984182665677 0.143624440717384 0.145388619054597 0.150413953895579 0.161963081505909 0.148451672229487 0.143379207366213 0.148791342033336 0.145259543903286 0.153289831286570 5 5 - 23763259 23763813 23763604.727 23763109 23764500 - gene protein_coding_gene TRUE TRUE AT5G58800.1|AT5G58800.2 quinone reductase family protein|FMN binding / oxidoreductase similar to quinone reductase family protein [Arabidopsis thaliana] (TAIR:AT4G27270.1); similar to putative quinone oxidoreductase [Cicer arietinum] (GB:CAD31838.1); similar to unknown [Prunus armeniaca] (GB:AAD38143.1); contains InterPro domain Flavodoxin/nitric oxide synthase; (InterPro:IPR008254) 0.189619437688767 1.98991282987255 0.0730644823049598 1 1.73547728701712 16.8232520145407 0.189619437688767 0.0858345439296552 AT5G67390_at 5.68126859294131 5.89360373596309 6.5238525305246 6.59647831896447 7.61243200259041 6.79664470405289 7.14416624525129 7.17193070504712 7.08211496889447 7.14353728465753 8.57961046380043 8.56752102509377 8.3040204417562 8.44253250897349 7.77139797044246 8.53315773839592 7.9001581817255 7.67438374622018 6.97219985865418 0.189575242961526 0.180508609091164 0.196181170286873 0.189707448863731 0.183053186195768 0.198021750712213 0.180508609091164 0.184746489753006 0.187254505958436 0.185323485923151 0.185038457160080 0.194682619466979 0.193574369101105 0.191209301384592 0.181983883515185 0.186294630615570 0.195812535875375 0.185651162174544 0.190496387162174 5 5|0 -|/ 26905121 26905711 26905415.5 26904896 26906464 - gene protein_coding_gene TRUE TRUE AT5G67390.1|AT5G67390.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57340.1); similar to hypothetical protein MtrDRAFT_AC137703g30v2 [Medicago truncatula] (GB:ABE82530.1) -0.238440476235412 -1.98641917646999 0.0734977330859044 1 1.73046323130191 14.3213213362268 -0.238440476235412 0.146498771215714 AT5G51140_at 8.42783054376662 8.3742871459925 9.25208866234107 9.11501899154511 9.51807538995185 9.34405541157069 8.19726556701784 8.42596128015472 8.80794580683875 8.55425452188407 9.3554840838414 8.97280858639778 9.09009625047303 8.76923657681646 9.0335418495043 9.24460036100783 8.58843735111566 8.98498565251408 8.76386121635063 0.124844127757070 0.120632092278393 0.124220730524124 0.119220141138776 0.115087953262652 0.124241206681663 0.118599354454140 0.115087953262652 0.129617805322046 0.120248528093776 0.117052667813479 0.120009202891154 0.118290532965526 0.137123087001453 0.119383001954993 0.115087953262652 0.130619988122070 0.129010931254398 0.116322992825365 5 5|0 -|/ 20801511 20802127 20801834.778 20801157 20804040 - gene protein_coding_gene TRUE TRUE AT5G51140.1 pseudouridine synthase family protein similar to pseudouridine synthase family protein [Arabidopsis thaliana] (TAIR:AT3G52260.2); similar to Pseudouridine synthase [Medicago truncatula] (GB:ABE89376.1); contains InterPro domain Pseudouridine synthase, RluD; (InterPro:IPR006225); contains InterPro domain Pseudouridine synthase; (InterPro:IPR006145); contains InterPro domain RNA-binding S4; (InterPro:IPR002942) -0.171701526659048 -1.98593048180120 0.0735585278717124 1 1.72976214639468 17.6886158843675 -0.171701526659048 0.0558727215715823 AT5G50250_at 8.49008760835709 8.64828121123633 9.21922109274133 9.0533898919001 9.36374824535084 8.67684369993859 9.14605576256144 8.84907108986502 7.98166097808596 8.64943440567572 9.28157973394792 9.28965189310914 9.12248208053857 9.12491692486932 9.57189484606718 9.47334618846337 9.03390804362556 8.88925298288892 8.54261831108493 0.120179566536084 0.118375320759519 0.119271945503566 0.116577613151341 0.119691686416076 0.121344491181862 0.117181426742004 0.120119527039154 0.132814178748399 0.122683901660346 0.121540693932101 0.115882055868579 0.11649688749547 0.12024882914433 0.125400176682681 0.121725777747637 0.128595929639659 0.130273848868522 0.125973049589538 5 5 - 20470059 20470867 20470421.818 20469713 20471239 - gene protein_coding_gene TRUE TRUE AT5G50250.1 31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative similar to RBP31 (31-KDA RNA BINDING PROTEIN), RNA binding [Arabidopsis thaliana] (TAIR:AT4G24770.1); similar to RNA-binding protein 2 (GB:AAA18379.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.228392951338351 -1.98563825341511 0.07359490426498 1 1.72934294688845 17.7381458177293 -0.228392951338351 0.135443657231246 AT5G61350_at 1.41573905208615 1.57523933853841 1.72637872628261 1.95849647688191 1.43573569372461 1.63975042674478 2.29151703470327 2.5309118185258 1.9121612641455 2.12718209231062 1.95243019262235 2.39851177793485 2.32670520306648 2.64173262380981 1.9157590477199 2.75282381112834 2.82302265890647 2.10248141904088 2.30471018438649 0.228625708603278 0.223568328522932 0.225891152681374 0.221489211554056 0.220355182936482 0.229174362221901 0.220351640032106 0.224746217916016 0.238295181408931 0.229030992903493 0.222496321114251 0.225309565317915 0.224927627412825 0.224367479873203 0.228153052919714 0.231076419187799 0.220351640032106 0.239594100269079 0.220351640032106 5 5 + 24687165 24687698 24687376.909 24685199 24687727 + gene protein_coding_gene TRUE TRUE AT5G61350.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54380.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G39110.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G21480.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to putative protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAK63934.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98993.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.180681969410271 -1.98168181410206 0.074089058794554 1 1.72366993271380 4.06115499863236 -0.180681969410271 0.0730632743636273 AT5G03490_at 5.9834035721105 6.42048908994668 7.25518670737599 7.49180327961847 7.2794348124715 6.66220008826343 6.454183315912 6.63050291593692 6.90316651726711 6.6674875145381 7.43544607172186 7.01640514599737 7.70310133239848 7.77426940538549 7.17075710793777 8.03269075126392 7.50264265457851 7.52599674067858 6.57291915040175 0.223907170768333 0.209420344603683 0.207476486657117 0.219923345637421 0.224545454144472 0.248214922808965 0.226643528240245 0.207476486657117 0.215335587721181 0.2214538403986 0.212418677209688 0.218024901265825 0.207476486657117 0.211597837643693 0.224127636895165 0.208528406665027 0.234443985979861 0.211945086081560 0.215313053272077 5 5 + 872347 872853 872602.273 871459 873056 + gene protein_coding_gene TRUE TRUE AT5G03490.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G51210.1); similar to putative glycosyltransferase [Solanum aculeatissimum] (GB:BAD89044.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.232397213963131 -1.98138473552864 0.0741262885670058 1 1.72324414709719 13.8894944953616 -0.232397213963131 0.140494219467528 AT5G56740_at 5.02050971858664 5.26769675143107 5.72367648366195 5.71882411278547 5.62197856827352 5.63960855029724 5.44594634621361 5.68474165971693 4.00057056873639 3.93657793567014 5.4766407692428 5.7212551720187 5.55328566810144 5.5945575843831 5.47812625795845 5.47896738579177 5.21038681740045 4.95713082882197 4.67585640231052 0.210228104093821 0.206246932194908 0.214748784282448 0.20870372558729 0.215535688608678 0.215306901743361 0.215423105917522 0.209988337890248 0.229382474073768 0.212873174673701 0.211966448438806 0.213789270128702 0.206246932194908 0.206246932194908 0.216352582181966 0.215077037135998 0.218035178583835 0.212125477431663 0.222441539936669 5 5 - 22970394 22970749 22970596.909 22970022 22972890 - gene protein_coding_gene TRUE TRUE AT5G56740.1 histone acetyltransferase family protein Identical to Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) (HAG2) [Arabidopsis Thaliana] (GB:Q9FJT8;GB:Q8LKJ6); similar to histone acetyl transferase [Zea mays] (GB:AAM28228.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) -0.173108646862404 -1.98098786797548 0.0741760511596854 1 1.72267538031292 10.3344371635561 -0.173108646862404 0.0595617330389347 AT5G59460_at 5.41925443619645 5.890713226204 6.64466035668201 6.88662232259525 7.49273136661601 7.16745394787775 5.6816122522332 5.64914400978344 4.85709762827156 4.43883930707296 5.90266374642578 6.05915072930245 5.5777672667117 5.88408943340481 6.01509914317605 5.97008966227991 5.53252559375373 5.80827502716221 5.07572607193808 0.228953191478848 0.234660764293121 0.247376376077595 0.23378254736052 0.232723543961545 0.238714274243408 0.234304769079491 0.232984865119357 0.230320798681235 0.233883905758250 0.227302078808913 0.229101207956454 0.226845481048950 0.233202519341837 0.228387231918157 0.230422786246719 0.234815887524896 0.234058790965186 0.226845481048950 5 5|0 -|/ 23994213 23995093 23994642.5 23993949 23995625 - gene protein_coding_gene TRUE TRUE AT5G59460.1 scarecrow-like transcription factor 11 (SCL11) similar to unknown [Solanum tuberosum] (GB:ABB02621.1); contains domain FAMILY NOT NAMED (PTHR13582) 0.204734027910683 1.98070870276208 0.074211073961201 1 1.72227532532193 11.6711549452925 0.204734027910683 0.107750477928502 AT5G47360_at 3.65842596287187 3.69657774662645 4.14812231934544 4.44173689390567 4.00950647420201 4.56138766057691 4.20114913894997 3.80436435370658 3.97181835749205 3.91481332356175 4.6355099959016 4.53349629730518 4.33634076081886 4.59157261738832 4.75083900946439 4.60731551399895 4.57901700279261 4.53264860388754 3.84440405890625 0.202583124030738 0.204741932757819 0.199707975471803 0.205802368539249 0.200753589288570 0.216881020753424 0.205105466854210 0.204348062273328 0.204284729805240 0.211033809725782 0.199707975471803 0.207465431872456 0.203225372106671 0.205735546679828 0.20828165185428 0.199707975471803 0.217605434061346 0.213485199930249 0.20098563846462 5 5 - 19231808 19232180 19231984.1 19231672 19233105 - gene protein_coding_gene TRUE TRUE AT5G47360.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G12775.1); similar to PPR repeat containing protein [Brassica oleracea] (GB:ABD64962.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.221567366122177 -1.98031884929545 0.0742600090903744 1 1.72171668812422 8.30575267969713 -0.221567366122177 0.128302975948901 AT5G14870_at 0.94323454008036 0.906067474364155 0.256943028993981 0.809354716248808 0.48136083481096 1.02819426427430 0.62220897333029 0.743593144085615 0.621328577135729 1.01547902032105 0.679279046879128 0.542042119491347 0.801012202683364 0.601237010169003 0.799695653190767 0.47961194562818 1.14532364512122 0.607063041538368 1.04526436552363 0.221023637423663 0.221580725942221 0.223524515485517 0.227980568321643 0.218661020064426 0.225060495905053 0.224219659978809 0.225211703854955 0.218661020064426 0.219713659712003 0.226847991082231 0.218661020064426 0.219704695666352 0.229179014754842 0.223814107437491 0.221819132461965 0.223348288059560 0.221801943884404 0.223192107669138 5 5 - 4808290 4808836 4808614.818 4808094 4810900 - gene protein_coding_gene TRUE TRUE AT5G14870.1 ATCNGC18 (cyclic nucleotide-gated ion channel 18); calmodulin binding / cyclic nucleotide binding / ion channel member of Cyclic nucleotide gated channel family Identical to Putative cyclic nucleotide-gated ion channel 18 (Cyclic nucleotide- and calmodulin-regulated ion channel 18) (CNGC18) [Arabidopsis Thaliana] (GB:Q9LEQ3); similar to ATCNGC16 (cyclic nucleotide gated channel 16), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT3G48010.1); similar to ATCNGC14 (cyclic nucleotide gated channel 14), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G24610.1); similar to ATCNGC17 (cyclic nucleotide gated channel 17), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G30360.1); similar to putative cyclic nucleotide and calmodulin-regulated ion channel [Oryza sativa (japonica cultivar-group)] (GB:BAD36523.1); similar to cation channel family protein, putative [Medicago truncatula] (GB:ABE88729.1); similar to Putative cyclic nucleotide-gated ion channel 8 (Cyclic nucleotide- and calmodulin-regulated ion channel 8) (GB:Q9FXH6); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain EAG/ELK/ERG potassium channel; (InterPro:IPR003938) -0.228372083013295 -1.97891572284042 0.0744363819984306 1 1.71970646192576 1.52433565739746 -0.228372083013295 0.136296449116135 AT5G22510_at 8.89241677093723 8.92521948286263 9.8504843286971 9.97891549561274 9.84973426387364 9.58541036436726 9.7019638049491 9.3839423315335 9.38689111686463 9.3775574466066 9.74920250009211 9.77426332080378 9.54227603104552 9.79882057112263 9.67621557829574 10.0689977869356 9.90502014317626 10.1025780098522 9.31739717855551 0.117578297622965 0.104950731744710 0.104038170645792 0.105734349544188 0.107659744008182 0.110136027557351 0.106517169434738 0.106970693845265 0.107542037379505 0.105245857374228 0.104878376921681 0.101340792653972 0.103104014410133 0.107773383914314 0.105888555698177 0.101340792653972 0.106811518211555 0.104855681587829 0.107346909748396 5 5|0 -|/ 7475014 7475818 7475189.375 7474813 7477944 - gene protein_coding_gene TRUE TRUE AT5G22510.1 beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT1G56560.1); similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT3G05820.1); similar to beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] (TAIR:AT3G06500.1); similar to neutral invertase [Beta vulgaris] (GB:CAD19320.1); similar to alkaline/neutral invertase [Lolium temulentum] (GB:CAA05869.1); similar to Plant neutral invertase; Glycoside transferase, six-hairpin [Medicago truncatula] (GB:ABE94613.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Plant neutral invertase; (InterPro:IPR006937) -0.181646463501761 -1.97839970063178 0.0745013444228429 1 1.71896731561686 19.114904350358 -0.181646463501761 0.0751494463380875 AT5G37710_at 4.26817606692444 4.11912131931427 5.02707661549577 5.06699669916228 4.49272200192429 4.94363964853118 3.38705866491959 4.04697904120091 3.89650944023415 3.38464030016196 5.45378243653014 4.79835872399956 4.76146570086284 5.18256228399569 4.9036947714863 4.48717673182413 4.99755922907044 4.61810836221034 3.88306960559355 0.266138591961709 0.27321635774088 0.265602807633053 0.267693948059577 0.265602807633053 0.269117165673998 0.269395723708191 0.270089237173377 0.272085345753822 0.265826639271697 0.269783826455439 0.267282109741377 0.270661457403217 0.276671173223649 0.266921818911016 0.269473752797406 0.265602807633053 0.269810536258292 0.270664141151275 5 5|0 +|/ 14997619 14998559 14998163.7 14996389 14998630 + gene protein_coding_gene TRUE TRUE AT5G37710.1 lipase class 3 family protein / calmodulin-binding heat-shock protein, putative similar to lipase class 3 family protein / calmodulin-binding heat-shock protein, putative [Arabidopsis thaliana] (TAIR:AT3G49050.1); similar to calmodulin-binding heat-shock protein; CaMBP [Nicotiana tabacum] (GB:AAB34987.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921); contains InterPro domain Lipase 3, N-terminal; (InterPro:IPR005592) 0.232299322740856 1.97767623956836 0.0745925107448407 1 1.71793116831894 8.72984374651442 0.232299322740856 0.140870382356064 AT5G05630_at 2.09797917624067 2.43934112629084 2.54947136635555 2.99986051274263 3.27273341054866 2.83898821889276 1.89673668680322 2.15984352382572 2.44647807752827 2.22221716501488 2.28898519352376 2.40566414747847 2.74474174219475 2.67048525569204 2.61259829580244 2.85742336525375 2.44258422074302 2.43012456597075 2.30616424708160 0.225526945722920 0.216631827815852 0.220938129013943 0.235591625026619 0.218300686638767 0.223887212551108 0.219466956906622 0.224885853195616 0.234350616039765 0.21573440757773 0.224528853554966 0.21573440757773 0.216722879181789 0.216398470529748 0.218344720057544 0.217592159908716 0.224748502446871 0.222829540859319 0.2196804760228 5 5 + 1683435 1683976 1683748.091 1682322 1684192 + gene protein_coding_gene TRUE TRUE AT5G05630.1 amino acid permease family protein similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31820.1); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.1); similar to putative amino acid permease [Oryza sativa (japonica cultivar-group)] (GB:AAR10855.1); similar to amino acid permease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97257.1); similar to Os03g0576900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050538.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) 0.22387775804977 1.97692185110147 0.0746876854365962 1 1.71685089185428 4.97263375848282 0.22387775804977 0.131423420406406 AT5G07430_at 1.34271865284804 1.20461802128888 1.40290111166261 1.34313689698939 1.10252612578860 1.48119805729686 1.21572970647134 0.884185560043844 2.40127813271934 0.92288984987035 1.07471836660675 0.779437333459869 0.897265523811736 1.14037029415846 0.961453021251782 1.22381258029365 1.26005290516923 1.14484999736468 1.02505140943104 0.186869929075915 0.183491903173052 0.194505117225283 0.187912572129039 0.184052429755746 0.185933322548656 0.19065250414185 0.185373777154415 0.190281264214055 0.192184621044952 0.194026175703349 0.183491903173052 0.192651342534839 0.187073242484552 0.192050613244243 0.191066968760352 0.18388993538528 0.189642116592399 0.187706045493246 5 5 + 2353268 2354029 2353680.636 2352440 2354203 + gene protein_coding_gene TRUE TRUE AT5G07430.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G07420.1); similar to pectin methylesterase allergenic protein [Salsola kali] (GB:AAX11262.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -0.191796758219178 -1.9762082733272 0.0747778158655865 1 1.71582921137914 2.50211916660107 -0.191796758219178 0.0909084823856953 AT5G65230_at 1.09853555281438 1.15023368653077 0.850053459013484 0.51593110027486 0.579169875766467 0.844868992212932 0.571542710262071 0.7975211343156 1.45374903492031 1.27734376887228 1.11523407082013 0.86511726343911 1.14296616868981 1.31617525437143 1.28249332266274 1.27457074334344 1.47060144170933 1.6037332678665 1.13833253176167 0.201521417151731 0.206174191689825 0.205610183021206 0.207214415131088 0.203547473400186 0.207698349318689 0.204351368067818 0.207813931923491 0.211243798626492 0.209008096703048 0.208397839663550 0.205381515925208 0.207401237407962 0.200212495131181 0.202777425735333 0.204772485106935 0.214943454033883 0.211630507481204 0.213121431038146 5 5 + 26086054 26086563 26086358.818 26085516 26086878 + gene protein_coding_gene TRUE TRUE AT5G65230.1 AtMYB53 (myb domain protein 53); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB92 (myb domain protein 92), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G10280.1); similar to 4D11_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67537.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.187037936393859 -1.97522400684501 0.0749023032357739 1 1.71442021482675 2.07531700729760 -0.187037936393859 0.0840648038246131 AT5G18590_at 8.54051671501559 8.3848248182447 9.01950895237317 9.06604176383196 9.95644384433746 9.5379101895766 8.36354400325342 8.04826675155334 7.41732540281465 8.2177941836406 9.04669284897325 8.8558374773796 9.0064446769872 8.93833954515737 8.74245949675343 8.80007670733028 8.92408115559201 8.84029778008845 8.12024817214225 0.140155163944850 0.135712524322501 0.145100984373727 0.142490564377899 0.147144013599574 0.147788915179075 0.135306156514433 0.139129741844407 0.162236564648347 0.154745921700276 0.138049825136836 0.141982261586696 0.139744382359269 0.138745100246359 0.138562721919522 0.136913408521075 0.139139802798493 0.144477312529777 0.143838382985349 5 5|0 -|/ 6178520 6179190 6178907.2 6178356 6182737 - gene protein_coding_gene TRUE TRUE AT5G18590.1|AT5G18590.2 kelch repeat-containing protein similar to ACBP4 (ACYL-COA BINDING PROTEIN 4, ACYL-COA-BINDING DOMAIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.2); similar to Os12g0538800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066944.1); similar to Kelch motif family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95166.1); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072); contains InterPro domain Kelch repeat; (InterPro:IPR006652) 0.194540999209788 1.97500921193531 0.074929495653387 1 1.7141127700597 17.2709994450559 0.194540999209788 0.09493991385178 AT5G61450_at 6.44024151920078 6.27555111479395 7.72360112724696 7.59892962238798 7.75169343493773 7.1020344681227 5.82143976028964 5.45712463197054 5.38722045497129 5.38877745166542 6.56809653914928 6.48892115045277 6.41562292387592 6.46718650573408 6.1872238577443 6.37845447951708 6.13802657699557 6.26430619042908 5.32870981066486 0.246344118274404 0.240167387785869 0.248620304145959 0.250791167215581 0.241842156038014 0.256566125778623 0.240167387785869 0.249055635488604 0.251223188057598 0.247136184942703 0.244794761146062 0.241632592879565 0.245189047335266 0.246403637407774 0.240167387785869 0.240167387785869 0.252565254184797 0.254472208651658 0.243064387777522 5 5 - 24727605 24728448 24728042.909 24727259 24730171 - gene protein_coding_gene TRUE TRUE AT5G61450.1 2-phosphoglycerate kinase-related similar to Os03g0102400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048662.1); similar to 2-phosphoglycerate kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93493.1); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 0.225559991312886 1.97381509143765 0.0750808361741263 1 1.71240382693333 12.637184801746 0.225559991312886 0.133762210230208 AT5G46940_at 0.361333817333177 0.262349237217575 0.4155056438444 0.254394438977107 0.621665063356042 0.619485455363303 0.746529148768246 0.61364761180505 1.16483294503127 0.570275813120965 0.753090872399548 1.01166134209482 0.70261370179582 0.673326508701435 0.533066543446335 0.780251233764624 0.713614276422447 0.741505963111831 1.09946852410426 0.185948448857348 0.192366323223948 0.191149499001385 0.192413923957389 0.193898324725148 0.189133844867331 0.191946663652324 0.191030592986787 0.191323328788353 0.187315483875609 0.187463204276229 0.191336363722138 0.194397116381366 0.187621782354294 0.196209431941587 0.198369911510004 0.196294656314690 0.196752198744860 0.19539284842097 5 5 - 19075473 19075954 19075740.727 19075395 19076041 - gene protein_coding_gene TRUE TRUE AT5G46940.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT5G46930.1); similar to seed specific protein Bn15D12A [Brassica napus] (GB:AAP37968.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.163940627783524 -1.97364691845579 0.0751021730267997 1 1.71216318346968 1.32861400173441 -0.163940627783524 0.0399966060213204 AT5G60600_at 11.3993539739963 11.5093778228335 12.0988074062212 12.3310341032789 12.1816787161070 11.862573094877 12.1324403277293 12.1601690151493 12.0311974390560 12.1156507348865 12.2074696636149 12.1955897549204 12.5044597936524 12.4672362332274 12.0308705790159 12.6656388867460 12.2776590084841 12.5363570503444 11.9876745010796 0.0603336080511374 0.058668310171261 0.0645774816821118 0.0682803963739777 0.0598274069205204 0.062581314904152 0.0633110477701361 0.0585805302914608 0.0626284930712947 0.0607690906288027 0.0619892016913668 0.0580747466458434 0.0590413053706405 0.0614523554131048 0.0602839603557987 0.0580747466458434 0.0723651263288381 0.0580747466458434 0.0601533563228881 5 0|5 /|+ 24379652 24380428 24380012.625 24376195 24380711 + gene protein_coding_gene TRUE TRUE AT5G60600.1|AT5G60600.2 GcpE (CHLOROPLAST BIOGENESIS 4); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase. similar to GcpE [Lycopersicon esculentum] (GB:AAO15447.1); similar to (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia rebaudiana] (GB:ABG75916.2); similar to GCPE protein [Catharanthus roseus] (GB:AAO24774.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain IspG protein; (InterPro:IPR004588)|similar to GcpE [Lycopersicon esculentum] (GB:AAO15447.1); similar to (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia rebaudiana] (GB:ABG75916.2); similar to GCPE protein [Catharanthus roseus] (GB:AAO24774.1); contains InterPro domain IspG protein; (InterPro:IPR004588) -0.178618911820680 -1.97201412167861 0.075309627971128 1 1.70982720732980 24.1621798139864 -0.178618911820680 0.0710645481799237 AT5G44870_at 8.62750655521056 8.80953836528782 9.5258435597807 9.29424077202047 9.5786396621245 8.96370423496819 8.47327013552134 8.38013905455606 8.3306412630447 8.82863374095089 9.26502340246047 9.14210548506173 9.09404023569478 9.0985794813675 8.60569267197253 9.43274593009643 8.75997948997354 8.77763062430182 8.75575835237735 0.133732577410065 0.136896059269352 0.134071570566294 0.139672971773063 0.133732577410065 0.142236051272255 0.135766552075433 0.140159167444687 0.152273856735347 0.140001036500561 0.133732577410065 0.133732577410065 0.133732577410065 0.142439707454247 0.140762036533693 0.133732577410065 0.168692991192341 0.146550316095711 0.137250980039999 5 5 + 18135119 18135794 18135525.364 18131893 18135835 + gene protein_coding_gene TRUE TRUE AT5G44870.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G17880.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.212820679266359 -1.97116844406553 0.0754172858672592 1 1.70861764382753 17.7867698510539 -0.212820679266359 0.119093097592982 AT5G49190_at 2.46537196333822 1.97370630412081 2.48146434188052 2.04521319400608 2.25645690525779 2.18027514461558 2.20095254392464 2.0654890932659 2.25287652907862 2.25301087876517 2.06187033220105 2.15975341042571 2.37541414911218 2.28287958024029 2.16054227633635 2.26808881491253 2.62043634235248 2.38851818156065 2.49898322948821 0.19906179021164 0.201293866371474 0.205633746928695 0.199235430785456 0.203641045384719 0.201971652095424 0.207801942850917 0.198096169823182 0.207264230309885 0.202315376190899 0.201927981950678 0.199130904201582 0.198096169823182 0.211715536621526 0.205322336906744 0.198096169823182 0.204839141509242 0.204628422770623 0.203738723922613 5 5|0 -|/ 19960787 19961311 19961049.2 19960508 19964415 - gene protein_coding_gene TRUE TRUE AT5G49190.1 SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency. Identical to Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) [Arabidopsis Thaliana] (GB:Q00917;GB:Q9FJ20); similar to SUS1 (SUCROSE SYNTHASE 1), UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] (TAIR:AT5G20830.2); similar to SUS4, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G43190.1); similar to SUS3, UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G02280.1); similar to sucrose synthase [Citrus unshiu] (GB:BAA88981.1); similar to Sucrose synthase 2 (Sucrose-UDP glucosyltransferase 2) (GB:O24301); similar to sucrose synthase [Citrus unshiu] (GB:BAA88904.1); contains InterPro domain Sucrose synthase; (InterPro:IPR000368); contains InterPro domain Sucrose synthase, plants and cyanobacteria; (InterPro:IPR012820); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) -0.210903403542609 -1.97011896929668 0.0755510878195773 1 1.70711688912061 4.52093856880285 -0.210903403542609 0.116886120274617 AT5G11270_at 6.44159305744065 6.40140459717392 7.25281630980672 6.88346400341869 7.48776242795882 6.52143189794877 6.90906105808281 7.05395742882875 5.83244148714738 6.44350314986367 7.3506087675709 7.96542330846595 7.30607909569474 7.52681783890201 7.58194296605289 7.47805894897212 7.18053048771712 6.75723777946032 6.2838407878548 0.195763103796291 0.18926323951609 0.194324376965419 0.191823625533160 0.199557437626749 0.194673352337696 0.19709364895069 0.191512309945001 0.209759326376199 0.192267188056114 0.191551056873608 0.190237951080854 0.187952364934792 0.197028197999676 0.190403530662650 0.187952364934792 0.204794575505791 0.200385788103836 0.193038704325542 5 5|0 -|/ 3595558 3596281 3595908.9 3595286 3597099 - gene protein_coding_gene TRUE TRUE AT5G11270.1 OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3) Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT5G63740.1); similar to Calcium-binding EF-hand; Homeodomain-related [Medicago truncatula] (GB:ABE88496.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356) -0.269166982191199 -1.97005765448048 0.0755589119554734 1 1.70702921879727 13.6589026179456 -0.269166982191199 0.180908426245493 AT5G01450_at 4.26874850626172 4.45590867380074 5.81064377953212 5.43924592681319 6.27139616166265 5.67935601368687 4.31097234746861 3.71794599620256 4.31041725802596 3.76311963278884 4.61719951798143 4.50827463675108 4.12751079592971 4.78229010555682 4.20503033139536 4.91647259753606 4.20970328516891 4.20839742120311 3.44382360038097 0.213843922092668 0.215962748806029 0.218361081581362 0.224997517177812 0.214327153017691 0.221800587387734 0.212167267821078 0.211175167416551 0.216256901894203 0.211377403618264 0.210318497882571 0.211404027412827 0.214076257330839 0.21163772887317 0.212210813743138 0.208541150390763 0.216186742357918 0.213112127133596 0.215347579674898 5 5|0 -|/ 183934 184588 184242.75 183327 186447 - gene protein_coding_gene TRUE TRUE AT5G01450.1 protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G38185.2); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABD33279.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.250747666588848 1.96986927410154 0.0755829551493513 1 1.70675987221056 9.13726717576467 0.250747666588848 0.161892345108599 AT5G47900_at 2.53362790174069 3.08422532888185 3.7482856045717 3.75989629125695 4.47115584805418 4.43564019852798 3.77121971411663 3.73292617587739 3.63050369869035 3.61365179367704 4.42976288191075 4.78490431438628 4.53081639517573 5.03238685843352 4.36909619769054 4.8393995288910 4.76018510815511 4.428117694325 3.66549043165745 0.261110955822165 0.250342145785734 0.256882323109575 0.262059817443686 0.252413269458406 0.249732135604432 0.250507738091821 0.257865217775387 0.264154862428470 0.261221248833909 0.262325362268728 0.252329695959029 0.244796313110253 0.244796313110253 0.244796313110253 0.261086093602909 0.251769604695172 0.272203384944118 0.255739927448512 5 5|0 +|/ 19409966 19411335 19410939.4 19409209 19411387 + gene protein_coding_gene TRUE TRUE AT5G47900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27730.1); similar to H0502B11.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66526.1); similar to Os04g0404900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052706.1); contains domain Zinc-binding domain of translation initiation factor 2 beta (SSF75689) 0.194600766684338 1.96982684554011 0.0755883713389988 1 1.70669920924912 7.83381326473472 0.194600766684338 0.0957322526170689 AT5G43330_at 5.65067844642174 6.41719450805722 6.92079307741797 7.16050499352758 7.73203148576244 7.20172865587355 6.63581727946473 6.78807203602309 4.86756853165773 5.09714211072466 6.80544454896977 7.2559535872243 7.12343903561452 7.18917793563487 7.0552721579861 6.77921034498377 6.29753110645304 6.56800357075225 5.51179710480642 0.207378375541371 0.201020100154854 0.226616138152736 0.211636046667256 0.19691321258826 0.210008822800754 0.212180702921762 0.199366653380183 0.211847759041065 0.214789745147510 0.206101250832228 0.19691321258826 0.197475999749370 0.207267347458697 0.198330538246689 0.205859314647273 0.214388248601063 0.215594027643343 0.2057491563081 5 5 + 17408743 17409644 17409089.818 17407661 17409873 + gene protein_coding_gene TRUE TRUE AT5G43330.1 malate dehydrogenase, cytosolic, putative Identical to Malate dehydrogenase, cytoplasmic 2 (EC 1.1.1.37) [Arabidopsis Thaliana] (GB:P57106;GB:Q9LSX3); similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT1G04410.1); similar to malate dehydrogenase-like protein [Solanum tuberosum] (GB:ABC01890.1); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NAD-dependent, cytosolic; (InterPro:IPR011274); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557) 0.257024357212267 1.96875196034908 0.0757257060730452 1 1.70516255389882 12.8348975361595 0.257024357212267 0.168620549840574 AT5G05090_at 7.14031227369996 7.72871034610073 7.69935640134922 8.20688605981336 8.88369971064876 8.5646023622791 7.80859227237223 7.49537478870136 7.60788112907278 6.18819631382867 8.2407653536766 8.41586162127246 8.4978229065281 8.72009817050283 8.1450767149904 8.31820104595885 8.25664780764132 8.64897534133015 6.65127167792553 0.178768845544635 0.171891451322449 0.179143365755852 0.171028460886726 0.172827066800569 0.173823639755424 0.174201879852433 0.167077708516823 0.178754606006145 0.181181370613730 0.166314393103788 0.164328481838519 0.170601535752381 0.167723023442276 0.180088106876257 0.164932622482283 0.178357673281906 0.176380785398990 0.190813821348688 5 5 + 1503644 1504149 1503918.091 1503233 1504495 + gene protein_coding_gene TRUE TRUE AT5G05090.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10760.1); similar to NbPCL1 [Nicotiana benthamiana] (GB:BAE16280.1); similar to Os05g0412000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055539.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.244043306064414 1.96691253645386 0.0759612642670956 1 1.70253371953429 15.5515488571272 0.244043306064414 0.155144925441474 AT5G50190_at 0.906020869888938 0.871073891465248 0.787898790742581 0.89638022422473 0.674839413235561 0.918142135212453 0.141459403517166 0.454698319114929 1.18378796866068 1.077746137004 0.573985364770436 0.309651131736957 0.774087639230846 0.230684127142141 0.403919207227466 0.611986697651494 1.15301906467103 0.312700989501096 0.79849857280653 0.217169299409771 0.218427716306848 0.215692565010342 0.224562421248003 0.213710017392953 0.213710017392953 0.220885595738675 0.219625488532087 0.219684730958595 0.225925717232635 0.223546471103584 0.213710017392953 0.231616588641666 0.215423339458581 0.223004598218708 0.219391262329946 0.217440513326381 0.224084312356355 0.217970862959550 5 0|5 /|- 20450504 20451743 20451009.333 20450451 20452387 - gene protein_coding_gene TRUE TRUE AT5G50190.1 similar to EMB1353 (EMBRYO DEFECTIVE 1353) [Arabidopsis thaliana] (TAIR:AT4G30090.1) -0.178159625387661 -1.96467739362082 0.0762484193326043 1 1.69934070989712 1.48944671620779 -0.178159625387661 0.0714161070510837 AT5G40520_at 5.67199242515754 5.47673505834342 6.55761001868246 6.79262310430304 7.39618143170594 6.77144356561624 5.73364131966416 5.09909921187065 3.99034442417839 4.81474278497228 5.2291226228294 5.5694930849869 5.27599953705382 5.66902754915812 5.16770204255974 5.99340038210339 5.61996786668491 5.61703981414893 4.44842982493886 0.204925001368795 0.20246320357751 0.207991446082589 0.200191591228107 0.204156789403457 0.207554980092807 0.205371829049159 0.204409056466152 0.209537904412707 0.206953713774783 0.205594717653413 0.202688238473976 0.208830974894228 0.209144266321081 0.200191591228107 0.200191591228107 0.207218450391082 0.207212041913360 0.204719193802559 5 5 - 16248911 16249594 16249312.636 16248482 16251544 - gene protein_coding_gene TRUE TRUE AT5G40520.1|AT5G40520.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07170.1); similar to hypothetical protein PF10_0257 [Plasmodium falciparum 3D7] (GB:NP_700730.1); similar to Os09g0103200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062553.1); similar to Os01g0632300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043651.1) 0.250895575090196 1.96340426880904 0.0764124338970975 1 1.69752266362119 11.1551948288198 0.250895575090196 0.162919516911104 AT5G60350_at 1.94122702458076 1.7562671237473 2.03902988793597 1.65118915474955 1.52904779847135 1.84912527153016 1.98111733293685 1.56156912693218 2.25280248288054 2.04145306599158 1.66123374398433 1.83155421724778 1.73634095541991 2.10223611012072 1.96471181746952 1.69456599372276 1.98627415213605 1.37718494845183 1.37252732674445 0.180644657105663 0.177506711492873 0.18137018690474 0.182265736955093 0.183681188384359 0.181175328751578 0.178726348142700 0.184282343908288 0.183387922260241 0.181999618620901 0.199113673252577 0.180589359450618 0.193152047149183 0.177461547941077 0.181557551202256 0.177461547941077 0.181811169241701 0.187715961702486 0.18137638125341 5 5 + 24295487 24296046 24295841.6 24294956 24296340 + gene protein_coding_gene TRUE TRUE AT5G60350.1 unknown protein -0.210825028787293 -1.96271181684592 0.0765017795338916 1 1.69653403495230 3.63016677387283 -0.210825028787293 0.117766322507421 AT5G47280_at 1.08573087367750 0.768940765791684 1.30305109465368 1.09277109553166 0.805352081250984 1.07562048530841 0.784647575128128 0.740472132981428 1.13681207444248 0.886182192288492 1.42843844410030 1.13937478958538 0.780851982841287 1.31154332229136 1.90609038443155 1.18363106091752 0.996784784828775 1.47749343413850 0.96883366104673 0.223633983680340 0.220395261232328 0.23114816806134 0.230152018531545 0.225061193807152 0.222815971053136 0.224266097117556 0.225423702367630 0.235305412911521 0.225635081082739 0.221309476447009 0.219556339827912 0.235882482578759 0.220781868376300 0.219556339827912 0.219556339827912 0.227637805939053 0.226102212671565 0.221087736242516 5 5 + 19212205 19212755 19212473.455 19210384 19212786 + gene protein_coding_gene TRUE TRUE AT5G47280.1 ADR1-L3 (ADR1-LIKE 3); ATP binding / protein binding Identical to Putative disease resistance protein At5g47280 [Arabidopsis Thaliana] (GB:Q9LVT1); similar to ADR1-L2 (ADR1-LIKE 2), ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT5G04720.1); similar to ADR1 (ACTIVATED DISEASE RESISTANCE 1) [Arabidopsis thaliana] (TAIR:AT1G33560.1); similar to ADR1-L1 (ADR1-LIKE 1), ATP binding / protein binding [Arabidopsis thaliana] (TAIR:AT4G33300.2); similar to Probable disease resistance protein At4g33300 (GB:Q9SZA7); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.183837233107948 1.96184452766469 0.0766138215773847 1 1.69529599221933 2.09472426369930 0.183837233107948 0.0810904924629151 AT5G14750_at 1.25439379940964 1.65928555588930 1.63396951412082 2.06360075544476 1.35249548580728 1.55316562963285 1.30612989972076 1.70202751498527 2.06315969718082 2.02009241061967 1.73191399442635 1.60886541115792 1.56394673408022 2.03977064034373 1.26087891100703 1.53477326475341 1.60198181310892 2.02126305287694 1.98910716984767 0.171395740469194 0.173039398599119 0.172648265992487 0.169256763130022 0.172439571936122 0.172079680474628 0.165584060378717 0.166601154666825 0.166308254904216 0.175304431141167 0.168608632104913 0.169654092575501 0.174957053976070 0.166896438207156 0.172584755673274 0.168355072653399 0.165630505951354 0.171750268273512 0.175591502232095 5 5 - 4763681 4764618 4764032.091 4763455 4764741 - gene protein_coding_gene TRUE TRUE AT5G14750.1 WER (WEREWOLF 1); DNA binding / transcription factor Encodes a MyB-related protein involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). similar to MYB23 (myb domain protein 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G40330.1); similar to werewolf [Cucumis sativus] (GB:AAM23006.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.219068719493768 -1.96167340335897 0.0766359466046674 1 1.69505174168037 3.41290551284402 -0.219068719493768 0.127817449103356 AT5G37980_at 2.19127358988612 2.50215568309356 2.79370250437847 2.75991036728139 2.40510467128917 2.99554133908366 2.60612101347867 2.49468265689784 2.50685478677203 2.86131043523730 2.43214062435319 2.34779471611599 2.6025790671323 2.06241646658501 2.75654701428419 2.39006432157218 2.6735101552316 2.84743759118959 2.50491777951406 0.215929899731118 0.216340157254706 0.214419631582714 0.212295777179585 0.21676478865059 0.216761139856825 0.215825351450158 0.216182539239408 0.215029278410547 0.216495178414727 0.215094473196064 0.215178749778207 0.214139205965843 0.216758360669410 0.215209746100312 0.211841399316767 0.213295780452275 0.216873208228777 0.214744328438762 5 5 + 15149324 15150143 15149733.909 15148590 15150315 + gene protein_coding_gene TRUE TRUE AT5G37980.1 NADP-dependent oxidoreductase, putative similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G37940.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G38000.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) -0.210101970281572 -1.960098053311 0.076839907227649 1 1.69280361761436 5.16277260070651 -0.210101970281572 0.117221198816992 AT5G61430_at 1.99332022806608 1.48148437613322 1.75896320432239 2.40014525770458 1.93787764473628 2.09633492350418 0.785694452538562 1.03347206537650 1.8555766189573 1.74407647570615 1.74777591680826 1.45334471847451 1.93319364820517 1.65632801152863 1.42932891112520 1.70549470512814 1.81558891810079 1.52935265608203 1.37958833020040 0.200670914770118 0.199007879296543 0.193501426530893 0.205052766311906 0.202999353007284 0.194760128942191 0.193711548369177 0.196209193200104 0.204335114582718 0.201486037931673 0.193501426530893 0.198257173685775 0.196829861977629 0.202114517977092 0.198380093453812 0.202930391516210 0.202547102651726 0.194574573425382 0.198425066202217 5 5 - 24718575 24719198 24718829.818 24718348 24719987 - gene protein_coding_gene TRUE TRUE AT5G61430.1 ANAC100/ATNAC5 (Arabidopsis NAC domain containing protein 100); transcription factor similar to ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80), transcription factor [Arabidopsis thaliana] (TAIR:AT5G07680.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.238704615961562 1.95588793403146 0.0773874791525637 1 1.68679921676168 3.34518555769916 0.238704615961562 0.150825138685918 AT5G05700_at 7.17671131742464 7.50178206116573 8.32945586878046 8.4014623826284 8.87411782948214 8.64281814598244 7.01631524422077 7.33849130590414 7.85176651478494 7.0249481794733 8.48893186347708 8.12527773231924 8.34479127190438 8.45957233646234 8.11968500571322 8.54229639641085 8.16221617461055 8.31885428282074 7.25199264295764 0.199193928339282 0.186725372997435 0.197663191780119 0.194810904278223 0.197245400330158 0.190570672865147 0.193784885676650 0.194873477779706 0.206951780051032 0.194242176441971 0.192526861400877 0.191627464992686 0.194865008818356 0.192430986252443 0.192655403205321 0.186725372997435 0.202950313625077 0.187202563929248 0.196653713322657 5 5|0 -|/ 1712985 1713820 1713308 1712671 1715732 - gene protein_coding_gene TRUE TRUE AT5G05700.1 ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase Encodes an arginyl-tRNA:protein transferase. Mutants display delayed leaf senescence. Identical to Arginyl-tRNA--protein transferase 1 (EC 2.3.2.8) (R-transferase 1) (Arginyltransferase 1) (Arginine-tRNA--protein transferase 1) (ATE1) [Arabidopsis Thaliana] (GB:Q9ZT48); similar to arginine-tRNA-protein transferase, putative / arginyltransferase, putative / arginyl-tRNA-protein transferase, putative [Arabidopsis thaliana] (TAIR:AT3G11240.1); similar to Os05g0446800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055690.1); similar to MGC81517 protein [Xenopus laevis] (GB:AAH72233.1); contains InterPro domain Arginine-tRNA-protein transferase, N-terminal; (InterPro:IPR007471); contains InterPro domain Arginine-tRNA-protein transferase, C-terminal; (InterPro:IPR007472) 0.188878380912006 1.95533121004352 0.0774601589791108 1 1.68600563131657 15.7583637254670 0.188878380912006 0.0896137280073267 AT5G61590_at 11.7897962660980 11.8838573938780 12.0999029386675 12.0741569452802 12.5840672405201 12.5679557605652 10.6878471373837 10.797396335434 11.1158749840816 10.9967038465765 11.5715794497460 11.5405148523970 11.7140858099988 11.6595794777132 10.6810164006122 11.4114615772254 11.4466960344307 11.2646340512752 11.0701087495210 0.085500747495189 0.0827386628755883 0.0837925971457354 0.0863171641713366 0.0850182798979187 0.088877183669374 0.0837213063142498 0.0910850335325427 0.108529020913390 0.0831905679264374 0.0850060100539845 0.0833959966761822 0.0862061227397422 0.084056318941466 0.0900076152959702 0.0850545037591833 0.0849036406056673 0.0864788575396436 0.0841459952568245 5 5 - 24781882 24782403 24782156.727 24781664 24782550 - gene protein_coding_gene TRUE TRUE AT5G61590.1 AP2 domain-containing transcription factor family protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07580.1); similar to AP2 transcription factor [Sisymbrium irio] (GB:AAR15436.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.158141070090700 1.95526935819783 0.0774682376100805 1 1.68591747009361 23.0466684105956 0.158141070090700 0.0255341898510011 AT5G04210_at 1.96760234479485 1.85667756974524 1.92226485521906 2.13014721911411 1.56777979200307 1.87081522447735 1.578229364219 1.82586752177743 1.95560948630688 2.42760857520403 2.34298571731460 1.93529647043005 2.07750659908752 2.15949470988053 2.22466261967503 2.00632797442877 2.01762034702949 2.13398656619827 2.23049837657456 0.210316909403790 0.204166110123479 0.204706236234917 0.212384582933967 0.205639798595326 0.210256413165347 0.212556185405169 0.208980263408625 0.208851617314151 0.201664297525016 0.201664297525016 0.204100323545549 0.201664297525016 0.202877758638331 0.202907117968988 0.203677021908122 0.218522689747418 0.201664297525016 0.201664297525016 5 5 - 1155103 1155668 1155404.636 1155056 1155725 - gene protein_coding_gene TRUE TRUE AT5G04210.1 RNA recognition motif (RRM)-containing protein similar to zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G29580.1); similar to U2 auxiliary factor small subunit [Medicago truncatula] (GB:ABE89510.1); similar to Os06g0170500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056931.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.181911900622064 -1.95507929117343 0.0774930676763797 1 1.68564656324945 3.99832662218578 -0.181911900622064 0.0790529375566087 AT5G54650_at 3.16263394132809 3.39833772985013 3.51592619503773 3.68765835472925 4.16084356375657 3.65077418498961 2.96370838640815 3.29690234064415 3.23265205170931 3.34264028342916 4.45562921040792 5.08009711775853 4.06836629120281 4.28824340896882 4.30238205467266 4.31106769927005 3.49734019211376 4.08548542284752 2.8388444170408 0.206450634619102 0.197706447625476 0.200305638796457 0.203684571567476 0.202189580122180 0.198664878231198 0.197448215588659 0.198512663910477 0.201501535123174 0.19821030508572 0.196047175335208 0.199461018697753 0.200096283321711 0.197398404684141 0.199687034905598 0.198268102503741 0.203640809116143 0.198623456185402 0.197748487389894 5 5 - 22215092 22215476 22215267.636 22214855 22219336 - gene protein_coding_gene TRUE TRUE AT5G54650.1|AT5G54650.2 Fh5 (FORMIN HOMOLOGY5); actin binding Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G15200.1); similar to Pyridoxal-dependent decarboxylase; Actin-binding FH2 [Medicago truncatula] (GB:ABE93173.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104); contains InterPro domain Plant inhibitor of proteinase and amylase; (InterPro:IPR011052) 0.209269892294306 1.95482793026931 0.077525916476872 1 1.68528830982303 7.17915909145047 0.209269892294306 0.116890347903222 AT5G65770_at 6.2689997156983 5.9737730398308 7.0599033200622 6.77677811784493 7.2590907036733 6.9377174747402 6.15214033903034 6.01076797736981 5.85287311144994 6.34660638966644 7.03182005269025 7.00451111969354 7.15016634468087 6.86339821576197 6.9405186308331 7.03644011741526 6.92570548688432 6.73988810223059 6.27728249633923 0.110464607837712 0.122103550960827 0.108820989126431 0.116121621834389 0.110776450035967 0.113975642845012 0.114483612897839 0.119034590734163 0.122361106741022 0.112099094043217 0.115844175206081 0.117669216651680 0.110085062927688 0.117689456183848 0.110537080272817 0.114127313111769 0.117273173404992 0.108485076131224 0.109458129189210 5 5|0 +|/ 26332101 26332746 26332421 26328813 26332770 + gene protein_coding_gene TRUE TRUE AT5G65770.1 nuclear matrix constituent protein-related Identical to Putative nuclear matrix constituent protein 1-like protein (NMCP1- like) [Arabidopsis Thaliana] (GB:Q9FLH0;GB:O49539); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67230.1); similar to Os01g0767000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044359.1); similar to nuclear matrix constituent protein 1 (NMCP1) [Daucus carota] (GB:BAA20407.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) -0.191235587277075 -1.95332897787882 0.0777220749611543 1 1.68315232194284 13.1151346733274 -0.191235587277075 0.0932868283883803 AT5G15440_at 7.43491812043778 7.40368327690163 8.46089389497036 8.49062676200356 9.05676712279555 8.53340602544569 8.14422710911362 8.01089134180785 7.79053518068279 7.5972361924985 9.07582805598924 9.27590449107506 8.88094926234386 9.13646434351976 8.98456707051986 8.96939483873831 8.58449816645226 8.7845953360758 7.76211629008502 0.181838985892580 0.179857675942328 0.182606365754328 0.189584291684670 0.17688164801772 0.186550920582758 0.180190163028239 0.176292230245477 0.203353528355248 0.192437879288317 0.179981416180563 0.170668418856222 0.177173057415995 0.177712077956866 0.170668418856222 0.171026777218126 0.173888442276027 0.180590214382595 0.188700378111113 5 5 + 5013467 5014098 5013716 5012064 5014284 + gene protein_coding_gene TRUE TRUE AT5G15440.1 circadian clock coupling factor-related similar to circadian clock coupling factor-related [Arabidopsis thaliana] (TAIR:AT5G39360.1); similar to Os07g0598200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060180.1); similar to Os03g0427000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050411.1); similar to circadian clock coupling factor ZGT [Nicotiana tabacum] (GB:AAK56924.1); contains domain no description (G3D.1.20.58.140); contains domain F-box domain (SSF81383) 0.191326094691483 1.95084676979947 0.0780479235993174 1 1.67961672349083 16.5310039150235 0.191326094691483 0.0937606469619884 AT5G53970_at 7.67096339443756 8.01353445540227 9.30519043195048 9.30169232677996 9.4980758207081 8.89341432208044 9.53024299773907 9.44360598171226 7.41366060253276 8.67122240222672 8.9017394590564 8.52204185377828 9.1897161481666 8.83847991242884 7.99483651720374 9.29205379203692 8.97865155757866 8.57066790766607 8.4257850715177 0.189378337444807 0.178197514305118 0.171658764066048 0.173855988585321 0.177315250660534 0.191543298502522 0.186077467475480 0.173806634583743 0.210640777204689 0.181946351304943 0.175197143314505 0.171658764066048 0.172481894762664 0.180753745851975 0.189117625134962 0.173648055357034 0.192462420856701 0.18362285500272 0.177745748822712 5 5|0 +|/ 21928906 21929789 21929322.7 21927763 21930003 + gene protein_coding_gene TRUE TRUE AT5G53970.1 aminotransferase, putative encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment similar to aminotransferase-related [Arabidopsis thaliana] (TAIR:AT5G36160.1); similar to tyrosine aminotransferase [Glycine max] (GB:AAY21813.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005958); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) -0.212182475538637 -1.9493297650703 0.078247692710308 1 1.67745687096893 17.4352130091422 -0.212182475538637 0.121198654224063 AT5G45780_at 2.01731570811309 2.32441089144773 2.05124757301358 1.82476022847616 2.44356084785145 1.99773332062134 2.13037795499308 1.62614771538222 2.07586109416067 2.55363521855678 2.32596077836981 2.24027435077554 2.28430091923841 2.19947345690217 1.88065685820130 2.32211354363133 1.81494379151220 1.97667520238763 2.11944733247757 0.177416951966315 0.175217920841149 0.174868475816177 0.184494406727403 0.173590183521956 0.178799436445752 0.172535829662577 0.183101718838603 0.184239818793478 0.172613297384843 0.178311984108953 0.184429895986540 0.172535829662577 0.183068944933942 0.173332617490222 0.174327848559148 0.173461735892111 0.183462100129937 0.178369002198427 5 5 - 18584173 18584762 18584485.909 18584173 18586852 - gene protein_coding_gene TRUE TRUE AT5G45780.1 leucine-rich repeat transmembrane protein kinase, putative similar to NIK3 (NSP-INTERACTING KINASE 3), kinase [Arabidopsis thaliana] (TAIR:AT1G60800.1); similar to putative leucine-rich repeat transmembrane protein; putative protein kinase [Gossypium hirsutum] (GB:AAT64032.1); similar to putative leucine-rich repeat transmembrane protein; putative protein kinase [Gossypium hirsutum] (GB:AAT64017.1); similar to somatic embryogenesis receptor-like kinase 1 [Poa pratensis] (GB:CAH56437.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.222847355878416 -1.94909258487877 0.0782789691811378 1 1.67711924712264 4.24204315216682 -0.222847355878416 0.133892683876462 AT5G18880_at 1.38064873483825 1.22276405940001 0.771097440389793 0.486179289528826 1.17813916778540 1.09204012533249 1.14800088282525 1.15279631496284 1.10686658739491 0.758102085548178 0.796867458626574 1.6759104745473 0.95932911629817 1.56170392352252 1.11321780533639 1.15331657970184 1.07363939446934 1.44815523679235 1.35630657328966 0.245411507363183 0.238156192167131 0.247202300901407 0.241112226329735 0.240984961905899 0.239450349396593 0.239605436944531 0.24151442573338 0.240401608164102 0.241204180207376 0.235858037919975 0.235858037919975 0.239695623792467 0.235858037919975 0.238177076621333 0.235858037919975 0.247717156106271 0.246218837571997 0.238936978182738 5 5 - 6300606 6301105 6300900.273 6300537 6301424 - gene protein_coding_gene TRUE TRUE AT5G18880.1 glucose transporter similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04650.1); similar to SAE1-S9-protein [Brassica rapa] (GB:BAA77394.1); contains InterPro domain Facilitated glucose transporter; (InterPro:IPR000803) -0.169570709415386 -1.94761324180515 0.0784743101589724 1 1.67501380759549 2.20222120891922 -0.169570709415386 0.0583124797729758 AT5G55950_at 1.12539862082794 1.39241177653643 1.91129507523487 1.78876390849111 1.48577886391367 1.44208573785820 1.89734623009985 2.25194007502616 1.21893985814603 1.84925232960636 2.2251153311413 2.48554327610352 2.25938702811998 2.25959334489473 2.24586786940227 2.24005529903495 1.76445706690761 2.35659690773888 1.67505756370193 0.212842432905494 0.202272879763357 0.204147146145921 0.20842424954019 0.198917143101256 0.199684874451830 0.205887981517664 0.206792720364236 0.199813462108286 0.202471650034037 0.198917143101256 0.198917143101256 0.207232428772474 0.209593707237238 0.206188067274110 0.206079510583466 0.221510273848826 0.201339649112488 0.199581295023864 5 5|0 -|/ 22675652 22676179 22675934.8 22675338 22677660 - gene protein_coding_gene TRUE TRUE AT5G55950.1 transporter-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT5G57100.1); similar to glucose-6-phosphate/phosphate-tranlocator-like [Oryza sativa (japonica cultivar-group)] (GB:BAD13039.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.181600487553346 1.94502740010846 0.0788168504175426 1 1.67133519589715 3.56720766894987 0.181600487553346 0.0800470508951945 AT5G18440_at 4.85720003716185 5.48674328753125 6.369243898203 7.14655596036444 6.56483604024282 6.33719051345825 5.68770224746515 5.73785533745327 3.78003863256837 4.6426634111803 5.37995515989463 6.08749269500284 5.58109613918165 5.63954959028397 5.95391527332908 6.12782945018687 6.20940879413989 5.95706539546347 5.12492742543743 0.197261746637099 0.195393052349032 0.206816367442079 0.200742225789258 0.193054498121677 0.195705122536882 0.196257052611278 0.191572215053832 0.207229175656267 0.197809792155776 0.191572215053832 0.197374950885975 0.192430840824851 0.197986609476304 0.191572215053832 0.193154702055225 0.203969222542389 0.194105408395154 0.2006939187414 5 5|0 +|/ 6114815 6115702 6115474.4 6112852 6115934 + gene protein_coding_gene TRUE TRUE AT5G18440.1|AT5G18440.2 similar to Os01g0814000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044603.1); similar to P0432B10.22 [Oryza sativa (japonica cultivar-group)] (GB:BAB90401.1); contains domain SUBFAMILY NOT NAMED (PTHR13309:SF3); contains domain FAMILY NOT NAMED (PTHR13309) 0.262657579406913 1.94492695413641 0.078830184306715 1 1.6711923435189 11.214873691192 0.262657579406913 0.177739571967821 AT5G25060_at 6.899785332039 6.85078398302623 7.57309328015651 7.61169824779296 8.07278463091984 7.40100313672598 7.00959397060823 6.51977704866345 6.81115683037338 7.00468692478797 7.88482289447255 8.06534371564807 7.61217139411745 7.82306908013177 7.57906444326468 7.8682668602307 7.25805591818909 7.41810804879272 7.12483794752046 0.145023926779653 0.142776075427436 0.150315085779207 0.150605575086279 0.150899074865836 0.149856896900403 0.144160884514135 0.144958216592702 0.155626354989799 0.144740652890181 0.145581432926520 0.144407664856289 0.142162404147673 0.148897006431446 0.146454672610279 0.148572410894581 0.144085064038488 0.146489941498188 0.151002897594519 5 5 - 8634234 8635404 8634856.909 8634077 8640220 - gene protein_coding_gene TRUE TRUE AT5G25060.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G10800.1); similar to putative U2-associated SR140 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28014.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034); contains InterPro domain SWAP/Surp; (InterPro:IPR000061); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain mRNA splicing factor, Cwf21; (InterPro:IPR013170) -0.231444149183873 -1.94465917512725 0.0788657413984533 1 1.67081152852833 14.5767349680331 -0.231444149183873 0.144280528164075 AT5G52670_at 1.85258903982959 1.83940310203134 2.06628623011494 2.29259886056954 1.61025073213631 2.12844685952198 1.89801055176977 1.86952097457297 2.10290811428630 2.29743606803389 1.85373562944787 1.98755186447352 2.30978262453861 2.24476161676424 1.7860086876061 1.91247414491811 2.08951837003715 2.23311125316323 2.33678887124721 0.18345051918834 0.179749316789158 0.181053334716747 0.187674715215796 0.186612118185915 0.182871300416318 0.183147579009200 0.178442190554717 0.181940347202493 0.188776588833762 0.188901022255019 0.185172966592403 0.185445892805389 0.190640872348102 0.183485719573722 0.179482292903278 0.197218396498353 0.181304119445657 0.185262707034942 5 0|5 /|+ 21381319 21381422 21381365.875 21380881 21381528 + gene protein_coding_gene TRUE TRUE AT5G52670.1 heavy-metal-associated domain-containing protein similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT5G52720.1); similar to Unknown (protein for MGC:78286) [Mus musculus] (GB:AAH71252.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.193660810639675 -1.94379765626959 0.0789802396930602 1 1.66958649277922 4.09355281468051 -0.193660810639675 0.0980061224996836 AT5G38520_at 10.3840986391162 10.6456969721881 10.8838939064291 10.8515615152394 11.0843044330877 10.7003800458003 11.4623837271505 11.3928021934149 10.6539455147993 10.8293491638478 11.7428415052380 11.8245023165183 11.7394028463982 11.653873631994 11.6293848608728 11.8799579978954 11.3921631085416 11.3521300357254 10.8477957816481 0.091441125596914 0.0928886323452037 0.0984044316685603 0.0930165250189382 0.0933784071112262 0.100445128007426 0.091927616891118 0.091984505269746 0.102037664651700 0.0929124942721761 0.0925596683344855 0.0912779745898284 0.0912779745898284 0.0953553714255255 0.0964264487766378 0.0912779745898284 0.0994286906965865 0.0986464184477673 0.0927637083136469 5 0|5 /|+ 15439832 15440400 15440183.889 15438803 15440661 + gene protein_coding_gene TRUE TRUE AT5G38520.1|AT5G38520.2 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G19850.1); similar to Os05g0419000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055569.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57254.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089)|similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G19850.1); similar to Os05g0419000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055569.1); similar to Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57254.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) -0.182339808848649 -1.94317501751461 0.07906308646873 1 1.66870127586091 22.1400462747181 -0.182339808848649 0.081486256802899 AT5G01300_at 2.5390667612288 2.20223599718976 2.93568701902330 3.41365847934206 2.67455854749399 2.29305393783536 3.12159316801365 2.78160793507057 3.14604586512073 2.35689359530100 2.92871981317818 2.73300575452005 2.69268974138158 3.34063809725505 2.97265948208779 2.93064206140819 3.29365128422356 3.25271227125977 3.10142674914508 0.217526214148289 0.214551427089083 0.212540259530349 0.209860608132279 0.212133734508964 0.226807316848259 0.213570080050823 0.218069148808147 0.209499448120651 0.209898692699068 0.220703761868888 0.208073544932317 0.214110429197702 0.212463091848239 0.215147289714771 0.219715417699537 0.211845337500288 0.227750167296193 0.207944842426307 5 5|0 -|/ 121644 122407 121925.7 121482 122524 - gene protein_coding_gene TRUE TRUE AT5G01300.1 phosphatidylethanolamine-binding family protein similar to Os05g0468800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055802.1); similar to cold regulated protein [Triticum aestivum] (GB:BAC41494.1); similar to cold-regulated protein [Hordeum vulgare subsp. vulgare] (GB:CAC12881.1); contains InterPro domain PEBP; (InterPro:IPR008914); contains InterPro domain YbhB and YbcL; (InterPro:IPR005247) -0.222458869056601 -1.94197031400775 0.0792236110790301 1 1.66698886919529 5.68828867215962 -0.222458869056601 0.134387549533793 AT5G24330_at 2.26944753556425 2.09592729450023 2.2355218139547 2.1857712950754 2.02154030961893 1.99779670338277 2.50161724680449 2.26327692018005 1.88957599513158 2.4875958100101 2.30930155426198 2.81340859398857 2.65560280479555 2.45980832947372 2.8635673568773 2.13001781100092 2.26378201203050 2.50988824964245 2.25918802179143 0.207588891172648 0.204027027675507 0.204027027675507 0.213432619126598 0.213313443228402 0.216844204993563 0.207181522896148 0.211534833061764 0.204027027675507 0.206563211445695 0.204027027675507 0.204027027675507 0.204027027675507 0.205243896874107 0.216272862484311 0.209299352158121 0.217054034022812 0.204027027675507 0.209222916857377 5 5|0 -|/ 8295592 8296214 8295846.556 8295150 8297071 - gene protein_coding_gene TRUE TRUE AT5G24330.1 ATXR6 (Arabidopsis thaliana Trithorax- related protein 6); DNA binding Encodes a SET-domain protein. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. Identical to Histone-lysine N-methyltransferase ATXR6 (EC 2.1.1.43) (Trithorax- related protein 6) (TRX-related protein 6) (Protein SET DOMAIN GROUP 34) (ATXR6) [Arabidopsis Thaliana] (GB:Q9FNE9); similar to ATXR5 (Trithorax- related protein 5) [Arabidopsis thaliana] (TAIR:AT5G09790.2); similar to Nuclear protein SET; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE94382.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) -0.166069404275062 -1.94191088507985 0.079231537725076 1 1.66690440658333 4.55275840554506 -0.166069404275062 0.0519032044481422 AT5G63150_at 4.2057021553948 5.11274023510721 5.50998380901612 5.79844606597366 6.79062282235653 5.51195186001538 5.15826870225756 5.2736786306124 4.48769549793745 4.69418681107666 6.501453536256 6.97334950445932 6.06161530993309 6.30151695599153 6.18292917354941 6.80903020139433 4.97590520568961 6.06225578236025 4.38661547419163 0.250068599454596 0.240163885632025 0.245412077964173 0.246998389629782 0.242060435864461 0.24417925779916 0.241488760098258 0.240714922932088 0.249502726962467 0.239001830518897 0.242534182888026 0.239132605055789 0.24382654727085 0.242734652497337 0.251410059297407 0.239680617302647 0.261394800083016 0.254430419981635 0.245908047137469 5 5 + 25347489 25347862 25347638.727 25347426 25348070 + gene protein_coding_gene TRUE TRUE AT5G63150.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90666.1); contains InterPro domain Protein of unknown function DUF1713, mitochondria; (InterPro:IPR013177) 0.364216042199058 1.94091877292963 0.0793639749756782 1 1.66549454229159 10.7983440616448 0.364216042199058 0.276576190726102 AT5G65530_at 0.717118956620083 0.854884609990079 1.02606823944068 1.28933309236589 1.29450066933412 1.25787334615419 0.656219418899957 0.668900667720398 1.03319152852656 1.37679661231009 1.08640140881607 0.8327723169057 1.24212715275113 1.16889559588263 0.852077587457176 1.09110561279336 1.76515157659865 1.48403608226616 1.21780967305863 0.205302802627359 0.205339835700273 0.213537458545034 0.206108219342062 0.208854187174615 0.20581044630816 0.209483767441453 0.205728152045019 0.204278392192359 0.219025906887795 0.204442839755571 0.205423065538727 0.204278392192359 0.212357154209911 0.208308284315623 0.210104624037164 0.208831375207509 0.208212806466373 0.204278392192359 5 5|0 -|/ 26208081 26208998 26208507.222 26207818 26210332 - gene protein_coding_gene TRUE TRUE AT5G65530.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10520.1); similar to putative receptor protein kinase PERK1 [Oryza sativa (japonica cultivar-group)] (GB:BAD45880.1); similar to Os06g0663900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058295.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.165883268080743 1.93998079119282 0.0794893757881077 1 1.66416188363020 2.17040580239015 0.165883268080743 0.0518558330166692 AT5G37080_at 1.32086787702404 1.28585749539817 1.45985886068787 1.6964325274042 1.54159413917462 1.35547869437176 1.48250393205955 1.51840465716540 2.14500217516715 1.50846713987235 1.57935622638935 1.93701842079248 2.05932927427342 1.22492071898718 1.74600675417689 1.82149158155900 1.63270820252464 1.78957944191202 2.13130507148893 0.224927035547928 0.224927035547928 0.226681333924589 0.226079882899851 0.226703851075927 0.240782631652451 0.224927035547928 0.224927035547928 0.224927035547928 0.23535389163647 0.229311980061138 0.224927035547928 0.229980440432042 0.224927035547928 0.224927035547928 0.224927035547928 0.228021736896696 0.225807982867366 0.231598066545793 5 5 + 14678874 14679369 14679110.143 14676363 14679638 + gene protein_coding_gene TRUE TRUE AT5G37080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05090.1); similar to hypothetical protein 31.t00031 [Brassica oleracea] (GB:ABD65118.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Protein of unknown function DUF223, Arabidopsis thaliana; (InterPro:IPR003871); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.166180272906518 -1.93846221157627 0.0796927889458015 1 1.66200491014210 3.28365450112054 -0.166180272906518 0.0528088003097276 AT5G13420_at 8.43359285485317 8.39024192517541 9.15812364344568 9.13058359601606 9.07921393122695 8.76075047140133 9.1577443651125 9.07147766230942 8.2765582517304 8.59426139654726 9.49023733039107 9.2540970462081 9.16085782717304 9.42699883225426 9.38617322647858 9.14610399740502 9.34749406979196 9.53012560120605 8.22919695256904 0.0920086861439976 0.0921013136387059 0.099125705947026 0.0937830825097963 0.0916905141524451 0.0959820381373744 0.0943389613703329 0.0944286006745327 0.112885051013679 0.0975460345282309 0.0901539404931295 0.0925885360068272 0.0889552898510488 0.090371690165018 0.0889552898510488 0.096641465631049 0.0917049000276868 0.09742138412134 0.110900770642162 5 5|0 -|/ 4302093 4302793 4302465.444 4301795 4304315 - gene protein_coding_gene TRUE TRUE AT5G13420.1 transaldolase, putative similar to transaldolase [Solanum tuberosum] (GB:AAB54016.1); similar to transaldolase-like protein [Solanum tuberosum] (GB:ABB17002.1); similar to transaldolase [Lycopersicon esculentum] (GB:AAG16981.1); contains InterPro domain Transaldolase; (InterPro:IPR001585); contains InterPro domain Transaldolase subfamily; (InterPro:IPR004732) -0.168461454291841 -1.93783191576486 0.0797773589655436 1 1.66110985687291 17.7524326520154 -0.168461454291841 0.057785405375847 AT5G03880_at 11.0040286397275 11.0553567345854 11.4972272118175 11.4708574007904 11.4423451867878 11.3461828556473 11.5190977272756 11.6551518344659 11.2236756234968 11.4956410428557 12.1448375114547 12.0582592936378 11.9359480697150 11.9614830960280 11.9063261433344 12.134946865015 11.7804656462651 11.9096655418400 11.3281117832243 0.0858370803383366 0.0829869649603906 0.085223628711004 0.0842668204005394 0.0829869649603906 0.0848409045505287 0.085671069206276 0.0856779435187387 0.0870629244661736 0.0875017570482994 0.0835097334968108 0.0836728434154645 0.0836545639769989 0.0877718557241524 0.085809540248019 0.0829869649603906 0.0928501277620135 0.091422901308828 0.0833136740671767 5 0|5 /|- 1038873 1040253 1039458.667 1038507 1041479 - gene protein_coding_gene TRUE TRUE AT5G03880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.2); similar to Os08g0558200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062492.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56846.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.157955140167346 -1.93741254416471 0.0798336744508336 1 1.66051439603053 23.0378481176056 -0.157955140167346 0.0305125624783501 AT5G20520_at 8.06976711230895 7.98573129174018 8.79706041815585 8.64863078659805 9.63697077409362 8.89580691123802 7.79818724256107 7.6712318063353 7.77071789818905 7.17043382613005 8.83629688914534 8.47448462280676 8.95637872176675 8.82083803373469 8.65501119100817 8.69156269917502 8.59930333094419 8.61113529435112 7.97881865794528 0.130402040057973 0.123694306625911 0.124168253735918 0.128956118437644 0.128002605701313 0.130663997523786 0.123989148700019 0.125679933223975 0.144257139186551 0.134560218649967 0.123612641501652 0.120096901001319 0.124230150153574 0.122169948371509 0.129579691807834 0.120096901001319 0.127570810899524 0.125142616349608 0.121408215316206 5 0|5 /|- 6943724 6945198 6944150.222 6943156 6946456 - gene protein_coding_gene TRUE TRUE AT5G20520.1 WAV2 (WAVY GROWTH 2) Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13610.1); similar to hypothetical protein LOC561333 [Danio rerio] (GB:NP_001032774.1); similar to Os07g0608300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060241.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.221027292760934 1.93659780238250 0.0799431881054778 1 1.65935771125941 16.6107315305229 0.221027292760934 0.133435686795972 AT5G54140_at 4.12492513769782 4.5104790251648 5.03427309168644 5.32382871210166 4.37083304978202 3.98708131126284 2.44389386654163 2.38238840265567 2.80556257270923 2.39142445280595 2.76596957818734 3.33852030697842 2.82734512022232 2.81658561915178 2.25466370547027 3.12499619024470 2.95841389410498 2.42331999105067 2.67396343771011 0.243418595879052 0.237605592364086 0.244112334431361 0.242827833857141 0.22987387204762 0.252429295525103 0.227763791568381 0.227627636355872 0.236002161088223 0.226090684513992 0.223744306154780 0.225287149462571 0.223744306154780 0.224848233885059 0.236921272548976 0.227297214657503 0.227211091160426 0.228790875120102 0.226126338593163 5 5|0 +|/ 21984058 21984991 21984592.8 21983059 21985287 + gene protein_coding_gene TRUE TRUE AT5G54140.1 ILL3 (IAA-amino acid hydrolase ILR1-like 3); metallopeptidase encodes a protein similar to IAA amino acid conjugate hydrolase Identical to IAA-amino acid hydrolase ILR1-like 3 precursor (EC 3.5.1.-) (ILL3) [Arabidopsis Thaliana] (GB:O81641); similar to IAR3 (IAA-ALANINE RESISTANT 3), metallopeptidase [Arabidopsis thaliana] (TAIR:AT1G51760.1); similar to putative auxin-amidohydrolase precursor [Populus alba x Populus tremula] (GB:CAG32960.1); contains InterPro domain Peptidase M20; (InterPro:IPR002933); contains InterPro domain Peptidase M20D, amidohydrolase; (InterPro:IPR010168) 0.199702424913654 1.93627800054331 0.0799862125005505 1 1.65890374711459 6.74090130215398 0.199702424913654 0.107174162534288 AT5G57815_at 9.59261556385475 9.66918545466234 10.2414527085603 10.5864375031098 10.5986611515036 10.2362853558563 9.09298489891017 9.56361673320688 9.132888861895 9.07643947708519 9.9194959891369 9.84558539248749 10.0390185327750 10.2375143899255 9.4808667936704 10.2971588530766 10.0668757358320 9.7488719733106 9.05530738361226 0.108699864015894 0.110120890993577 0.115076643334452 0.113243049105233 0.113486308860073 0.107453642150403 0.112691391708983 0.111037871662706 0.121292348520656 0.107826915661040 0.107210926203810 0.108251298291558 0.106085089475863 0.106457941298219 0.114539075447884 0.107909609994658 0.112354605123341 0.113125645465562 0.111823629357643 5 5|0 +|/ 23444475 23444836 23444635.889 23443894 23445082 + gene protein_coding_gene TRUE TRUE AT5G57815.1 cytochrome c oxidase subunit 6b, putative similar to cytochrome c oxidase subunit 6b, putative [Arabidopsis thaliana] (TAIR:AT4G28060.1); similar to putative cytochrome c oxidase subunit [Triticum aestivum] (GB:AAM92706.1); similar to Os04g0498200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053212.1); similar to Os03g0390400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050275.1); contains InterPro domain Cytochrome oxidase c, subunit VIb; (InterPro:IPR003213) 0.209417145486156 1.93580013545132 0.080050541999197 1 1.65822546931966 19.4689726037368 0.209417145486156 0.119606690189125 AT5G58870_at 9.90755488542429 9.94668030198565 10.7763456809517 10.9369315342488 10.7558580460851 10.738575119226 10.9044296021765 10.9246730409346 10.4089272784384 10.6121410489486 10.9871045125995 10.8738880882938 11.1626757534281 10.9970487303944 10.7200063328656 11.3626562777759 11.2671860570106 11.0510430066987 10.5969208896581 0.0724082923425294 0.0734140332071672 0.074978548647508 0.0752127277977274 0.0760555258120618 0.0772794162960738 0.0739989980142788 0.075140565085358 0.0856573303692431 0.073761233960481 0.0777376946466205 0.0723025193880612 0.0759286811085044 0.0753954898926374 0.0816968291228402 0.0743462813185136 0.0781289060951636 0.078913269304272 0.0757616871497608 5 5|0 -|/ 23787318 23788141 23787835.8 23787037 23791006 - gene protein_coding_gene TRUE TRUE AT5G58870.1 FTSH9 (FtsH protease 9); ATP-dependent peptidase/ ATPase/ metallopeptidase encodes an FtsH protease that is localized to the chloroplast similar to FTSH7 (FtsH protease 7), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT3G47060.1); similar to Os02g0649700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047584.1); similar to 26S proteasome regulatory complex, ATPase RPT1 (ISS) [Ostreococcus tauri] (GB:CAL56127.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.15725200194077 -1.93383552123489 0.0803155213574988 1 1.65543766602894 21.4073964433283 -0.15725200194077 0.028971599556402 AT5G59650_at 2.18331372137007 2.28804822402493 2.5248664115827 2.57065787978167 1.7077450771486 2.18119223881338 2.04950648670354 1.97041770630647 2.60920178469768 2.58808789084337 2.91154355689481 3.11234468868666 2.68994540827186 2.8186612183553 2.9772842163398 2.70322553578387 2.45255591700973 2.67777245137544 3.01995768187318 0.172104173914403 0.171115210346548 0.179260337493057 0.183728743912022 0.180184539530151 0.172940944092841 0.182650725883900 0.178556011135180 0.180580924418722 0.171973787177388 0.178129665787612 0.171115210346548 0.173676211945563 0.171115210346548 0.179950487290174 0.171766023093031 0.171115210346548 0.171451539734770 0.175475844558482 5 5 + 24051642 24052297 24052028.455 24048572 24052326 + gene protein_coding_gene TRUE TRUE AT5G59650.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59680.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59670.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90328.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.183946094185052 -1.93343852653186 0.080369165386736 1 1.65487447487929 4.95046800649697 -0.183946094185052 0.0853904083187567 AT5G12840_at 6.15328153148327 5.98921906459054 7.35111521041302 7.44251690846988 7.79306725473861 7.48302703669281 6.33437379564695 6.44866288446593 5.34567772197519 5.58104816659506 6.63530864277288 6.60980059758412 7.06934041896841 6.7452209882065 6.23253108042258 6.87484594369822 7.17120161407703 6.48974032864712 5.80679302483176 0.185099269607444 0.188685462015064 0.194650811535742 0.19336481904184 0.198338078353758 0.204649598167092 0.184325022754873 0.188178040805078 0.200296123301503 0.207597299877887 0.186801698940033 0.186797036178473 0.189564868214946 0.190594796160152 0.187126391575897 0.184932754049303 0.189526943612198 0.183487946099463 0.195109770906930 5 5|0 -|/ 4051155 4052695 4051874.333 4050694 4053605 - gene protein_coding_gene TRUE TRUE AT5G12840.1|AT5G12840.2|AT5G12840.3|AT5G12840.4 HAP2A (EMBRYO DEFECTIVE 2220); transcription factor Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Identical to Nuclear transcription factor Y subunit A-1 (AtNF-YA-1) (Transcriptional activator HAP2A) (NFYA1) [Arabidopsis Thaliana] (GB:Q9LXV5;GB:O23630); similar to CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis thaliana] (TAIR:AT3G20910.1); similar to CCAAT-box binding factor HAP2 homolog [Daucus carota] (GB:BAD15086.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) 0.172069185057882 1.93220503224878 0.0805360542989329 1 1.65312491189139 13.0275771306115 0.172069185057882 0.0657739085355998 AT5G56700_at 1.12592350091749 1.49564597769804 1.66119524712928 1.59480707207391 1.49531632708588 1.26271863067427 1.38726326066040 1.62959752274841 1.60586924479734 1.62657718834492 0.985505372077047 1.15679189891352 1.50703802161524 1.17390116191394 0.731140323256572 1.36461572567647 1.6087970590506 1.64778057055293 1.38676304914513 0.219536206802931 0.221956658954485 0.222896108033731 0.229211401651654 0.227759745443317 0.219536206802931 0.225578289553212 0.225448758377131 0.219536206802931 0.221105958013163 0.225076448962567 0.219536206802931 0.219536206802931 0.223415025156467 0.222458932599654 0.221935356597818 0.228028990815087 0.228323031204094 0.237511311995392 5 5|0 +|/ 22959815 22960540 22960150.5 22959020 22960604 + gene protein_coding_gene TRUE TRUE AT5G56700.1 F-box protein-related similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G60610.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.184943643049465 -1.93133509638812 0.0806539482651836 1 1.65189130139767 2.86239982273738 -0.184943643049465 0.0872047302223254 AT5G64816_at 6.52555540292904 6.82063280565377 7.47473993984449 7.84998899680894 7.9187655885428 7.11029858181535 7.30052951061565 7.1320564579674 6.19821200210792 6.27317506476274 6.8045385044361 7.26075414382158 7.09298006507942 7.21323984750139 7.35342140058054 7.92287976108558 7.25011660379615 7.44870003952154 6.65428846843618 0.190867215965196 0.182631467263765 0.180443716456969 0.190833138653793 0.184116820989501 0.181315609611097 0.180215720756317 0.187871202123036 0.198370033730988 0.183514692448102 0.194267779605799 0.184103093806263 0.180115953504800 0.193098961957883 0.180981006197244 0.185709476872981 0.194280286332119 0.18875838249069 0.183534785776329 5 5 + 25930715 25931050 25930887.818 25930226 25931253 + gene protein_coding_gene TRUE TRUE AT5G64816.1|AT5G64816.2 Identical to Protein At5g64816 precursor [Arabidopsis Thaliana] (GB:Q8L8Q8;GB:Q9LV96); similar to Os03g0185600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049198.1) -0.248726808132990 -1.93070950257060 0.0807388280634911 1 1.65100432734476 14.1008478976039 -0.248726808132990 0.165073159964772 AT5G42590_at 1.37868427838357 1.88283499918670 1.82397748428378 1.84547237548219 1.62546586361436 1.67814498864899 1.56511221625044 1.45483110652161 2.12912314009695 2.48196632640814 2.43606896856112 1.86700927683477 1.94638913524772 1.97935971368980 1.73077966913487 1.71890321890526 1.89231722737308 2.08548963141723 2.00260927068311 0.221873344569884 0.219191350823447 0.220660150601921 0.217986639775537 0.216016425654321 0.215736167390267 0.216541293193125 0.221352932654935 0.220843305274566 0.220657123007924 0.221133105301937 0.215736167390267 0.219147856077497 0.216205090525632 0.219690566004744 0.216037023445612 0.220395319055892 0.226447527314067 0.225102501710265 5 5|0 -|/ 17048462 17049098 17048784.8 17048349 17050954 - gene protein_coding_gene TRUE TRUE AT5G42590.1 CYP71A16 (cytochrome P450, family 71, subfamily A, polypeptide 16); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71A16 (EC 1.14.-.-) (CYP71A16) [Arabidopsis Thaliana] (GB:Q9FH66); similar to CYP71A14 (cytochrome P450, family 71, subfamily A, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G24960.1); similar to Cytochrome P450 71A27 (GB:O65438); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.186650036108128 -1.93060710071152 0.0807527297264244 1 1.65085915260425 3.73761833948389 -0.186650036108128 0.0898497069710791 AT5G18420_at 6.65126253419314 7.51250929742888 8.49918229584881 8.32687884272795 8.5238285393537 8.28976115827679 7.02480411241913 7.35854162520011 6.09959948895991 6.08629441466236 7.19115738944905 7.66560902789763 7.3610127954887 7.46211520032144 7.4775053774718 7.39429473527404 7.20853957603763 7.29342615950093 6.21008417726268 0.209265388201012 0.214714158396148 0.220829032920715 0.218986412692252 0.218842403195243 0.215663028797847 0.213705096368229 0.220798554270947 0.218053188418258 0.221293090763508 0.215367468672632 0.208371748105495 0.214878574792891 0.215310425650255 0.215632363152468 0.21041698637784 0.211370178689205 0.220498556004424 0.217466111880202 5 5|0 -|/ 6105654 6107061 6106131.4 6105482 6109387 - gene protein_coding_gene TRUE TRUE AT5G18420.1|AT5G18420.2|AT5G18420.3 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96658.1); similar to Os11g0240900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067583.1); contains domain SUBFAMILY NOT NAMED (PTHR15975:SF3); contains domain FAMILY NOT NAMED (PTHR15975) 0.250870230346329 1.92919381490248 0.0809448190571032 1 1.64885588141208 14.5301961638353 0.250870230346329 0.167568638259621 AT5G40440_at 4.77518175558688 5.52053379651793 5.79732226249252 5.85071216889285 6.04948791067039 5.69096061575743 5.14466412422459 4.69942707436379 3.72847881032586 3.91299736944650 4.41577248201635 4.54357077097028 4.0475028082184 4.00057354486918 4.33604541875463 4.4810849154108 4.61042976996755 3.82358042133040 3.78613357886415 0.194815913846902 0.194815913846902 0.198400386815643 0.195857384750794 0.199399256202467 0.212658648313790 0.199602525494203 0.199378589971898 0.196000153306317 0.194815913846902 0.196854824380064 0.194815913846902 0.203184580051040 0.194815913846902 0.194815913846902 0.198917320822300 0.199004494613652 0.194815913846902 0.203826887655065 5 5|0 +|/ 16200794 16201628 16201349.7 16198910 16201855 + gene protein_coding_gene TRUE TRUE AT5G40440.1 ATMKK3 (MITOGEN-ACTIVATED KINASE KINASE 3); MAP kinase kinase encodes a mitogen-activated kinase kinase similar to ATMKK6 (ARABIDOPSIS NQK1), kinase [Arabidopsis thaliana] (TAIR:AT5G56580.1); similar to mitogen-activated protein kinase kinase [Suaeda maritima subsp. salsa] (GB:AAM19158.1); similar to double MYC-tagged mitogen activated protein kinase kinase 3 [synthetic construct] (GB:ABF55663.2); similar to Protein kinase; Nuclear transport factor 2 [Medicago truncatula] (GB:ABE87929.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.246403987062772 -1.92900386524970 0.080970668758659 1 1.64858668425713 9.48679784822381 -0.246403987062772 0.162816574534000 AT5G08110_at 2.38224536303370 2.48953566072039 2.90872661328305 2.74668679828304 2.96073912687878 2.75270637671291 2.73820078978021 2.67350482230269 2.81714274581816 2.33038295731609 3.45201170591448 3.76581402071376 3.52173063724521 3.65012094001078 3.26270239374415 3.61962754679019 3.75776816279133 3.7775315865992 3.01380328489205 0.194034746066935 0.189632629460834 0.193681078343638 0.195395806089589 0.191953139762797 0.190637475188077 0.193694775087330 0.195762244220195 0.192992125158158 0.200003293900491 0.19275163195603 0.192699731671247 0.190064480215784 0.201817567617905 0.191230700450500 0.188417409575324 0.199328291755497 0.193637798178314 0.188417409575324 5 0|5 /|- 2595042 2595703 2595324.111 2594971 2600115 - gene protein_coding_gene TRUE TRUE AT5G08110.1 DEAD/DEAH box helicase, putative similar to RecQl3 (Recq-like 3), ATP binding / ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT4G35740.1); similar to Os07g0606500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060229.1); similar to ATP-dependent RNA helicase, DEAD [Dehalococcoides sp. CBDB1] (GB:YP_307973.1); similar to Os02g0111900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045657.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.164359026405361 1.92897547102178 0.0809745335063936 1 1.64854644486391 5.8672213789918 0.164359026405361 0.0505222719086127 AT5G47600_at 1.49894033881699 1.37776547950201 1.69606075030045 1.38188502951406 1.32001880004213 1.45811096276607 1.58122239839655 1.16174134437802 2.06814970555233 1.73299992469313 1.42861871134760 1.52423198742171 1.43070636338539 1.61546887892707 2.08642236769157 1.45671972565425 1.71236641372227 1.27598922697234 1.55629206630043 0.193450463117296 0.198072121169104 0.203212842784216 0.198259985124045 0.198512708242363 0.191523203696899 0.205718892149922 0.204140030480098 0.211485128584384 0.195312957165875 0.20111217555698 0.199423456746410 0.191523203696899 0.199993100594487 0.201544409047216 0.191523203696899 0.201774427391489 0.207006821262194 0.192836237440847 5 5|0 -|/ 19317194 19317640 19317341.2 19317008 19317725 - gene protein_coding_gene TRUE TRUE AT5G47600.1 heat shock protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12180.1); similar to hypothetical protein 25.t00004 [Brassica oleracea] (GB:ABD64967.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) -0.190584852360731 -1.92649241151484 0.081313167186013 1 1.64502852153476 3.11053281708399 -0.190584852360731 0.0961074512143014 AT5G43920_at 5.71178691994782 5.80171187466113 6.85604020490524 6.50138257712012 7.34176455716347 6.33935540816023 5.52180751672055 5.60458839422295 5.88179103194911 6.4035655300312 6.44845355450301 6.66496803039102 6.75051357858447 6.99201021874352 6.23455997707536 7.13866036157215 6.99755757831746 6.5965747513911 6.52901802684105 0.190000941980981 0.183134482841425 0.187969855039328 0.190663000950657 0.193651038151630 0.192059275262740 0.207671295887495 0.189630935964708 0.189927661502045 0.186940901150046 0.190432890041405 0.187084521092583 0.187048656489705 0.190406452617717 0.204798458582985 0.190992986145150 0.203566766190097 0.184854585227706 0.185153929360562 5 5 + 17692116 17692831 17692510.727 17689896 17693072 + gene protein_coding_gene TRUE TRUE AT5G43920.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G08560.2); similar to Os10g0465000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064796.1); similar to PREDICTED: similar to WD-repeat protein 26 [Danio rerio] (GB:XP_693216.1); similar to Os02g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046605.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) -0.267348568627929 -1.92619714247222 0.0813535226749381 1 1.64461032362624 12.7094899079107 -0.267348568627929 0.185220666679851 AT5G55000_at 6.05311119403545 6.1381518177341 7.07697013999265 6.83834887429272 7.74885761032774 6.90343968165301 5.46946428658218 5.477276192523 4.82721278368759 4.8932648100493 6.14459737302836 6.15358455938584 6.2338073957257 6.18193131444188 5.82890535195417 6.42873638843039 6.02096976848123 6.02426220032313 5.13516823933154 0.198786148497119 0.194194827874391 0.210299105662413 0.208551865687838 0.198908398719133 0.199113768286060 0.204909997913672 0.202406799883699 0.221901549379401 0.193273583257435 0.202162891734430 0.196174008306674 0.193273583257435 0.193273583257435 0.204877337531082 0.194421201374682 0.20932949622911 0.203010268221996 0.202524127436586 5 5|0 +|/ 22337622 22338797 22338110.444 22335536 22338973 + gene protein_coding_gene TRUE TRUE AT5G55000.1|AT5G55000.2 FIP2 (FH protein interacting protein 2); voltage-gated potassium channel FH protein interacting protein FIP2 similar to thylakoid lumenal 15 kDa protein, chloroplast [Arabidopsis thaliana] (TAIR:AT2G44920.2); similar to potassium channel tetramerisation domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53945.2); similar to Os03g0157500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049015.1); contains InterPro domain K+ channel tetramerisation; (InterPro:IPR003131); contains InterPro domain Pentapeptide repeat; (InterPro:IPR001646); contains InterPro domain BTB; (InterPro:IPR000210) 0.23679146585207 1.92608358172866 0.081369048385835 1 1.64444949171259 12.0026930938063 0.23679146585207 0.152736257696473 AT5G13880_at 2.14398088469461 2.33901227516698 1.7337532252326 2.31746907096063 1.86666793245582 2.39754988879443 2.32086293522354 2.48551589819397 2.38937757045621 2.23882019237292 2.85699334606038 3.02200665985646 2.52650433065734 2.62865415553202 2.97049144290355 2.57551298808672 2.15671864701717 2.65655408461902 2.56008173107558 0.193981942525689 0.176708521347709 0.180342622231704 0.181479270529696 0.177972410447394 0.178174053341006 0.177175679592735 0.174928112603188 0.183314401833335 0.195685930367675 0.179912692164452 0.176138794970446 0.180091413814943 0.177368922985917 0.191922386778326 0.181567659274983 0.190787137230184 0.179768462694992 0.178385764903628 5 5 - 4477497 4478016 4477764 4477356 4478111 - gene protein_coding_gene TRUE TRUE AT5G13880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47920.1); similar to hypothetical protein MtrDRAFT_AC157890g24v1 [Medicago truncatula] (GB:ABD33175.1) -0.228494970044108 -1.92557836054978 0.081438154193452 1 1.64373401523918 4.73573782457857 -0.228494970044108 0.143511018182283 AT5G57070_at 4.55419838325936 4.43697876913877 4.99565642956392 5.56110791496113 3.92935043930769 5.08490881786811 4.21335109613243 4.8086740638451 4.34934714606073 4.56520680290780 5.48136431401236 5.00415341400202 4.79419055052335 5.0677011988398 4.87252779340913 5.35836233967541 5.02630635989345 5.15368967953266 4.20429215349704 0.189380592684548 0.189262414307157 0.190849963077684 0.19942116096432 0.198188450156115 0.195612303257173 0.189262414307157 0.189262414307157 0.199309791459036 0.190470827009912 0.190939220313797 0.189262414307157 0.194512475310171 0.189262414307157 0.189262414307157 0.189262414307157 0.195383366260345 0.192866954374264 0.197694036266604 5 5 + 23114688 23115100 23114867.364 23113400 23115677 + gene protein_coding_gene TRUE TRUE AT5G57070.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G72790.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC01231.1) -0.328833316011004 -1.92432643222143 0.0816096320210213 1 1.64196142865645 9.4318960677885 -0.328833316011004 0.246151655794950 AT5G08360_at 2.37640168045894 2.14245978274506 2.24427416562047 3.11743015750717 2.03242515885852 2.22882353960348 1.99930742449040 2.12092800390523 2.22095438698956 2.27127409295647 3.0970072633882 3.49341460637691 2.27794959947968 3.37221673223326 3.25700283587419 3.01422112325626 2.92885283939242 2.46180435172829 2.15653301123863 0.242011576527666 0.245093570678871 0.247763403641479 0.251911548832299 0.246419467262071 0.242011576527666 0.246154730836357 0.250449760120568 0.244947499278695 0.246060349946371 0.243058767812887 0.249087383423772 0.248404968501063 0.248599644794356 0.242659865424060 0.242020088539575 0.242011576527666 0.256355072153811 0.258261101564278 5 5|0 +|/ 2689923 2690702 2690346.222 2689714 2690975 + gene protein_coding_gene TRUE TRUE AT5G08360.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23380.1); similar to Protein of unknown function DUF789 [Medicago truncatula] (GB:ABE84405.1); similar to Os10g0494000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064942.1); similar to Protein of unknown function DUF789 [Medicago truncatula] (GB:ABE84958.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) 0.244540027079336 1.92423946041291 0.0816215570813571 1 1.64183830513291 4.88478748882918 0.244540027079336 0.161460473105356 AT5G49410_at 2.17578528603663 2.54639345318588 2.18726115359840 2.74522391741256 2.78710747030875 2.57868413205649 1.62140243619034 1.45895156637673 1.58625549034513 1.79399047406166 2.02620847796130 1.68443470368974 1.95302804735877 1.84980986102265 1.73165882465898 2.00449810160186 1.78148490820005 2.05304422173824 1.82646347535519 0.214413805063277 0.213079770886784 0.215379603913361 0.219136773213527 0.212616482876564 0.2147764197968 0.206368147570432 0.213263244605612 0.213434675609835 0.212568452315371 0.206925053784077 0.209159511376760 0.206368147570432 0.208356063346979 0.207841563429975 0.210398961050208 0.21205187159926 0.210825293124885 0.209189253096240 5 5 + 20050144 20050937 20050513.909 20049689 20051225 + gene protein_coding_gene TRUE TRUE AT5G49410.1|AT5G49410.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73940.1); similar to Os08g0360000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061634.1); similar to Os03g0852500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051924.1) 0.212109217283133 1.92308646378966 0.081779802161584 1 1.6402062686062 4.07314653016219 0.212109217283133 0.124611787502885 AT5G09860_at 7.59506366713058 7.42918277628656 8.28891479628094 8.19889838465595 8.76201768756528 8.42945956798006 8.18833189553414 8.05891557190747 7.70279438507914 7.37915126966911 8.48501412524064 8.64441248412614 8.296386857825 8.65955371902962 8.3691473266354 8.41942238188418 8.24155409020623 8.2751082144976 7.58440011985488 0.119362052158909 0.122814200543264 0.124533159555461 0.123244586932488 0.123099921334795 0.119362052158909 0.120221845666701 0.122515678357818 0.124965018349772 0.133914665506036 0.121295943865570 0.122665920892891 0.123592604709502 0.119970267126080 0.124229313370961 0.121134540526543 0.123697082816864 0.128969185365421 0.127878557825876 5 5|0 +|/ 3069921 3070696 3070367.4 3066633 3070934 + gene protein_coding_gene TRUE TRUE AT5G09860.1 nuclear matrix protein-related similar to Os03g0110400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048715.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN61477.1); contains domain NUCLEAR MATRIX PROTEIN (PTHR13265) -0.173229937163512 -1.92004285739608 0.0821988968033813 1 1.63590016520933 16.1084847891501 -0.173229937163512 0.0698598576386762 AT5G46150_at 4.78378535168348 5.43453345821387 5.69108620649919 6.1742919244525 7.50811689616627 6.43085402435448 5.18562837816033 5.23523547853142 5.25323265175891 4.54853191553684 6.35649405069373 6.13410072546554 6.08738623058397 6.65084921697474 5.96747767063531 6.50013437650948 5.95631295483776 6.07057610538363 4.82584516626978 0.251437291219097 0.250298209806356 0.258010742796577 0.251880191779582 0.246820045312268 0.258963897187492 0.264406240561243 0.246820045312268 0.272427400579772 0.249974632707932 0.246820045312268 0.248388904978378 0.252833318571536 0.246820045312268 0.247436340226683 0.246820045312268 0.257399517391131 0.263997507895807 0.252676621189111 5 5 - 18726093 18726660 18726350.636 18724873 18727820 - gene protein_coding_gene TRUE TRUE AT5G46150.1|AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein similar to LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Arabidopsis thaliana] (TAIR:AT3G12740.1); similar to LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [Arabidopsis thaliana] (TAIR:AT1G54320.1); similar to Os03g0785500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051483.1); similar to Os02g0173800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046043.1); similar to hypothetical protein [Lotus japonicus] (GB:BAD32828.1); contains InterPro domain Protein of unknown function DUF284, transmembrane eukaryotic; (InterPro:IPR005045) 0.314862312075928 1.91977522894743 0.082235843562844 1 1.63552166561916 11.3510846285447 0.314862312075928 0.233458183316078 AT5G64970_at 3.01586914116482 2.98598924676943 3.50709956312227 3.68384274010566 3.56234131887889 3.43660612525195 2.97560258132247 3.07895978259206 2.99529599765264 3.40734802424560 3.54779720566258 3.46230957392431 3.2827011439705 3.06845164927685 3.13444761247779 3.25460872215174 3.73988382024897 3.40186102691307 3.12196379581238 0.206396843194598 0.205996435185749 0.217410546797311 0.212475997704902 0.207524804847668 0.215060046855364 0.203373910403239 0.203978801409127 0.208978537800489 0.207745052821335 0.203373910403239 0.209606212682350 0.209357807621486 0.215194797753182 0.208778867635037 0.209168202677907 0.221133777112447 0.211141785699450 0.209824077207797 5 5|0 -|/ 25976081 25976761 25976430.1 25975251 25977870 - gene protein_coding_gene TRUE TRUE AT5G64970.1 mitochondrial substrate carrier family protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G78180.1); similar to 80C09_21 [Brassica rapa subsp. pekinensis] (GB:AAZ41832.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.160016294256751 -1.91822707885511 0.0824498720768787 1 1.63333261052496 6.54897724585016 -0.160016294256751 0.0419003219366743 AT5G06130_at 8.88472440958532 8.92097290511021 9.4396428222268 9.55870816049233 10.0450288542151 9.58378972319287 8.97641364775169 8.99701425118667 8.22712032720244 8.53831482380356 9.50161873357062 9.60475554845538 9.64070659996819 9.5731805893234 9.67795510007792 9.82723154244515 9.25974095184414 9.58517904958272 8.50781126722603 0.139000270684775 0.127511041394347 0.126518515150083 0.130267934408480 0.132195604839946 0.137261433883123 0.126518515150083 0.128269731838784 0.160975767004970 0.147757566008055 0.133210248537485 0.130264010493624 0.127910269607275 0.130151828297424 0.132616033353625 0.127031377214427 0.14393463686714 0.128944121049225 0.138850419994791 5 5|0 -|/ 1853933 1855145 1854598.25 1853433 1855889 - gene protein_coding_gene TRUE TRUE AT5G06130.1|AT5G06130.2 chaperone protein dnaJ-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61670.2); similar to Os02g0651300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047593.1); similar to Os02g0535000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047038.1); similar to chaperone protein dnaJ-related (ISS) [Ostreococcus tauri] (GB:CAL57920.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) 0.180714873396147 1.91732547356558 0.0825747551781113 1 1.63205811255928 18.3048925902963 0.180714873396147 0.0827513364396613 AT5G26100_at 1.86073904899212 2.23877154707143 2.38578812478899 2.15927486338717 2.05019443943484 2.2293885416105 2.41647856012822 2.34566340950208 2.6336711403749 1.98915919057435 2.13518167813815 2.27410629749191 2.36329049684742 2.60613771051331 1.99902516716217 2.30059280211746 1.80245107217097 2.71457532323228 1.98354368852912 0.20832423629611 0.203816529125361 0.205851997036842 0.202345859121629 0.202345859121629 0.204289407298869 0.205585079905595 0.212024876632567 0.204722009109194 0.215551117779606 0.202693488283436 0.204095838239787 0.210784577649426 0.205800620998528 0.212730911521842 0.202345859121629 0.210667611964683 0.207289451884415 0.20908159869092 5 5 - 9117309 9117785 9117582.091 9117293 9117820 - gene protein_coding_gene TRUE TRUE AT5G26100.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44170.1) -0.180932382324347 -1.91635641742883 0.0827091766988211 1 1.63068855867523 4.44905968767375 -0.180932382324347 0.083235900310452 AT5G64330_at 7.2855231104664 7.38321957128518 6.65156281398068 6.97949675812948 8.77689749478601 8.5361474619258 7.46527526094142 7.4464459414153 7.54043586172998 7.7074739683388 9.26738156242344 9.35687343060398 9.34636210432154 9.25383223649085 9.10923132184596 9.0885978417213 8.26668262773357 8.97586474646552 8.60765104233355 0.184248994246276 0.182535085461728 0.191602083766056 0.195903746575719 0.171110092742630 0.186038994769924 0.178264757865982 0.183350877583457 0.189366334070572 0.179838192740660 0.179824214054775 0.176155793729983 0.180698054727463 0.182345843785760 0.171835277462520 0.171110092742630 0.183014362565105 0.176384654407900 0.175394667435960 5 0|5 /|+ 25746870 25747389 25747110.8 25744563 25747584 + gene protein_coding_gene TRUE TRUE AT5G64330.1 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); signal transducer Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. Identical to Root phototropism protein 3 (Non-phototropic hypocotyl protein 3) (RPT3) [Arabidopsis Thaliana] (GB:Q9FMF5;GB:Q9SPB4); similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G30440.1); similar to BTB/POZ; NPH3 [Medicago truncatula] (GB:ABE93078.1); similar to putative non-phototropic hypocotyl 3 (NPH3) [Oryza sativa (japonica cultivar-group)] (GB:BAD17765.1); similar to Os02g0568200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047181.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) -0.174333920947009 -1.91577994605944 0.0827892375417074 1 1.62987398306200 16.0830494806587 -0.174333920947009 0.0724767294809433 AT5G48790_at 10.4268702365229 10.6880922980460 10.9822027419111 10.9228409271361 11.4135826159833 10.7028867465675 11.5606702708626 11.4584446358606 11.0987106042353 11.4702500212910 12.3592462473408 12.1095464780310 11.9282160821143 12.0980479617668 12.026164553776 12.1282493888968 11.4983272997646 11.8736122427166 11.3453195081828 0.090361735964531 0.085270280835011 0.0864947444342647 0.087049164783013 0.0864439490341801 0.0920474164803913 0.0863496745283118 0.085270280835011 0.0988167829926472 0.0856866186705927 0.0869566384264998 0.085270280835011 0.085270280835011 0.0859024102956281 0.0857239458884708 0.085270280835011 0.0912637679415624 0.0877356481442915 0.0863889176594027 5 5|0 -|/ 19797249 19798193 19797679.222 19797086 19799276 - gene protein_coding_gene TRUE TRUE AT5G48790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73060.1); similar to hypothetical protein SBB1_14t00013 [Solanum bulbocastanum] (GB:AAP45177.2); similar to hypothetical protein SBB1_21t00009 [Solanum bulbocastanum] (GB:ABI34553.1) -0.217742527241089 -1.91384457507449 0.0830585496287665 1 1.62714001589651 22.6731669722966 -0.217742527241089 0.132621250849891 AT5G19980_at 7.71206341648755 7.8783980612103 8.61111189509822 8.81794054186271 8.06071747559507 7.00019286992814 5.99823750658131 6.72738438188695 6.6882465002666 4.80926683708236 7.38399715675383 7.8817812113538 7.18697090876649 7.57846796385251 7.48831747102849 7.1760110544519 6.69089083014065 7.64552749212437 5.76000549508292 0.213111636070083 0.216598117261848 0.229604131376586 0.221906393708496 0.212092737550653 0.260007106489227 0.224086805708748 0.218853895826919 0.233230372429234 0.226412409981325 0.225001098118477 0.215054123959472 0.217234704210351 0.222949745507306 0.21898335242483 0.214785613555816 0.230293665850167 0.223838558779954 0.224059096601082 5 5 - 6750074 6750475 6750306.636 6749707 6751072 - gene protein_coding_gene TRUE TRUE AT5G19980.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G76340.1); similar to integral membrane protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD33996.1); similar to Os08g0203900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061227.1); contains InterPro domain UAA transporter; (InterPro:IPR013657) 0.307564690700574 1.91313924697549 0.0831568997798606 1 1.62614394776246 14.1665066628494 0.307564690700574 0.227408111271815 AT5G20760_at 2.62898689685729 2.52013190398736 2.85127446228878 3.28710717015939 2.02517299606033 2.74997359259975 2.31303311670030 2.62592049241251 2.53657179880454 2.92852650605995 2.98577975537669 2.67444171830504 3.19102216645855 2.75484888249741 2.80231543907279 2.75518261004533 2.41675269887278 3.10374932682192 3.03215721061885 0.200789904690375 0.207220641979014 0.204324558235814 0.198631889710055 0.207757326535241 0.197405122082656 0.209070719410538 0.197405122082656 0.208408899154643 0.204987239880236 0.197761520290796 0.203127511388697 0.200257422852981 0.205243562415873 0.200100357228872 0.197405122082656 0.203241561878372 0.202031787874367 0.205574071959849 5 5 + 7032599 7033082 7032867.909 7032529 7033191 + gene protein_coding_gene TRUE TRUE AT5G20760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G42700.1); similar to hypothetical protein 40.t00047 [Brassica oleracea] (GB:ABD65162.1); contains domain F-box domain (SSF81383) -0.239212424218150 -1.91304683079416 0.0831697941865046 1 1.62601344906183 5.45916511880443 -0.239212424218150 0.157187940634611 AT5G47090_at 5.78661033088025 6.0251415538553 6.61957969897562 6.8477866346548 7.19507802766553 6.53491553304169 5.94958762413582 5.95177141282844 5.86604737228805 5.68067856438649 6.66906199898564 6.66313469886524 6.7571060780504 6.55978591248727 6.40568421008605 6.61212357639881 6.38048334042109 6.42513313664731 5.76300646413064 0.188943802068913 0.185799581211557 0.190950571392773 0.201889825895731 0.197675221649346 0.193635071784993 0.194461692207327 0.187837811014399 0.191512175126343 0.191156077993251 0.190773348585125 0.187824829268766 0.197101487968434 0.186408015154998 0.192395284524526 0.188067058066644 0.200460227838365 0.186804433335903 0.195574288403929 5 5 + 19145163 19145671 19145403 19144486 19145996 + gene protein_coding_gene TRUE TRUE AT5G47090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03710.1); similar to hypothetical protein 26.t00106 [Brassica oleracea] (GB:ABD65045.1) -0.213450842966236 -1.91200027177025 0.0833159452098825 1 1.62453582085886 12.5282963116352 -0.213450842966236 0.127732025783916 AT5G56330_at 1.42073234581697 1.9866533194667 1.76650439311585 1.99963972389488 1.54203977148612 1.51183659115442 1.75151296819366 1.77661583453955 1.51889482776913 1.69260761728836 1.73078975635199 1.55852749229664 1.74838431729849 1.51502900547757 1.23819294289389 0.87637750747088 1.34008643467994 1.61444031257844 1.53583277714009 0.217641993283168 0.212914527337198 0.212914527337198 0.223550736539413 0.215962438054462 0.229270156620607 0.216386349841742 0.219012872103588 0.21784367953759 0.225899065667008 0.216172774371745 0.212914527337198 0.215764895051549 0.213320370911661 0.214952853513995 0.218780990446317 0.224266253043457 0.223437430174039 0.218035139571932 5 5|0 +|/ 22831709 22833287 22832415.6 22830994 22833388 + gene protein_coding_gene TRUE TRUE AT5G56330.1 carbonic anhydrase family protein similar to carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G08065.1); similar to putative dioscorin class A precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD09854.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882) -0.196364991025189 -1.91144217112431 0.083393980778214 1 1.62374798819461 3.23702864105694 -0.196364991025189 0.106137829196861 AT5G59350_at 6.90040315282368 7.47912732069422 8.50057610411082 8.5873146514278 8.83998231816904 8.73633787567926 8.628936406749 8.7987113803242 6.61019067817036 7.17626760606611 8.51535872527908 8.4408041680939 8.6111504394835 8.45013367299652 8.2406100926784 8.4493953051156 8.4991945310299 7.85399351625643 6.78861079613964 0.176548425326466 0.163544948061744 0.173185069711468 0.169417204844900 0.170913372240797 0.170654965357330 0.165096259694198 0.170862092190937 0.209425651290447 0.182717089330921 0.164223395067253 0.163544948061744 0.166712120720132 0.177491870681138 0.166854501808278 0.164138659449655 0.177337071911092 0.181029769783261 0.176947229234216 5 5 + 23958710 23958969 23958863.636 23958008 23959439 + gene protein_coding_gene TRUE TRUE AT5G59350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39560.1); similar to hypothetical protein MtrDRAFT_AC146757g30v1 [Medicago truncatula] (GB:ABE90639.1) 0.196866619967575 1.91034026171483 0.0835482525766338 1 1.62219279448908 15.9293918594933 0.196866619967575 0.106959955598963 AT5G44800_at 5.43487186861723 6.26256512002339 6.61689305405142 6.81036083276718 7.09039068978525 7.02177182416468 5.99041689559342 5.89822036052435 6.3563363448256 5.52970360838372 6.73053549566758 6.83231959488301 6.50007652344502 6.78329611673244 6.38020191980407 6.82424345592384 6.36914231204566 7.20891171492726 6.29887613267397 0.181255487348940 0.178215951286199 0.180075470702667 0.178215951286199 0.181334344800972 0.180873725446783 0.181029498751201 0.185696006139622 0.181813370327359 0.181696749520739 0.178215951286199 0.179882149510767 0.180281503024228 0.184540485378456 0.183112870120512 0.183580803147623 0.190961509762936 0.178215951286199 0.178215951286199 5 5 - 18100892 18101377 18101226.545 18100646 18110679 - gene protein_coding_gene TRUE TRUE AT5G44800.1 CHR4/MI-2-LIKE (chromatin remodeling 4); ATP binding / DNA binding / chromatin binding / helicase similar to PKL/SSL2 (PICKLE, SUPPRESSOR OF SLR2) [Arabidopsis thaliana] (TAIR:AT2G25170.1); similar to PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 9 [Canis familiaris] (GB:XP_867801.1); similar to Os07g0497000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059705.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Chromo; (InterPro:IPR000953) -0.230670837964271 -1.90745033361468 0.0839541117911785 1 1.61811593333358 12.7733011241774 -0.230670837964271 0.148435578677535 AT5G60440_at 1.90889797723469 2.05026736715631 2.03878593351087 2.58442969349915 2.12428960141395 1.87254689218425 1.5711160494377 1.97753268720975 2.34091873238858 2.17040940999058 1.88430283072086 2.03430684431422 2.08351841676887 1.78540175625036 1.65130724072286 1.77267313797284 1.79962042944274 1.63105379363752 2.06595192997649 0.227250774139228 0.229123450427433 0.236150998398528 0.232279226485187 0.232110630540126 0.226050033405467 0.232881182488521 0.235189451471811 0.233011622831133 0.232401834405337 0.227922730318373 0.230113900539882 0.232458789339758 0.235615018417742 0.232653718127476 0.228942219853513 0.232743444493414 0.24170504749841 0.238632148852614 5 0|5 /|+ 24324258 24324715 24324449.8 24323555 24324746 + gene protein_coding_gene TRUE TRUE AT5G60440.1 MADS-box protein (AGL62) similar to MADS-box protein (AGL40) [Arabidopsis thaliana] (TAIR:AT4G36590.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE92216.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.212995444586737 -1.90665145619915 0.0840666274054912 1 1.61698942604880 4.02733314871283 -0.212995444586737 0.127903821916708 AT5G26900_at 1.84856352005344 2.30068204433676 2.43696749146678 2.37041951398897 2.18998159880202 2.39326509602114 2.43023708128249 2.15351534820759 2.92583881185623 2.70106281572407 2.92947144486211 2.75601592385248 2.53005612070921 2.73818299465035 2.86992710150996 2.41073576367554 2.67579338988724 2.72083220893310 2.47209362589348 0.156952409382560 0.157925153364934 0.156396511404555 0.157433975996242 0.154080195446913 0.153659575221301 0.152755318393702 0.152131285233923 0.178061900324698 0.160460701569604 0.160267062052321 0.152636623867070 0.162142465006997 0.161967159402496 0.159888175004289 0.157432590082588 0.169252951074085 0.157303469756113 0.155767501653539 5 5 + 9464534 9465046 9464705.455 9463755 9465089 + gene protein_coding_gene TRUE TRUE AT5G26900.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G27080.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G27570.1); similar to CDC20.1, signal transducer [Arabidopsis thaliana] (TAIR:AT4G33270.1); similar to hypothetical protein [Brassica napus] (GB:CAA11819.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Cdc20/Fizzy; (InterPro:IPR000002) -0.190328964533403 -1.90384272613101 0.0844633249540668 1 1.61303045500844 4.96722493827053 -0.190328964533403 0.098919912467336 AT5G62850_at 2.83866994209252 2.83176198960633 3.13213854413132 3.62963145439496 3.53378986909711 3.12831245920561 2.160536994555 2.77042330665758 2.42206861508271 1.99110043702515 2.53596702669379 2.55572665129219 2.28338786084675 2.74257850686514 3.12494866692176 2.7374443357482 2.85456591685277 2.73518730060745 2.31110532502232 0.196703692280962 0.195462419966433 0.201094797608068 0.201585003318869 0.198541157803264 0.201941448178609 0.194659407247028 0.202007664841243 0.199859269476231 0.202043612248179 0.211013770952005 0.204456344322608 0.202232665768949 0.197264334811295 0.198489031090643 0.194508868610338 0.216630144895886 0.201734318962173 0.197974704193972 5 5|0 -|/ 25247922 25248468 25248231.5 25247904 25248503 - gene protein_coding_gene TRUE TRUE AT5G62850.1 ATVEX1 (VEGETATIVE CELL EXPRESSED1) Encodes a protein that is expressed in vegetative cells of pollen. similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT3G28007.1); similar to seven-transmembrane-domain protein 1 [Solanum lycopersicum] (GB:CAE47557.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) 0.234226263094603 1.90169158659039 0.084768317819103 1 1.61000012053 5.47198335777017 0.234226263094603 0.153221328805158 AT5G35760_at 1.65107366154663 1.61644595777031 1.56326890441129 1.46934682424052 1.13781019927260 1.6426854341566 1.43116040978301 1.18033658532963 1.72205350895067 1.5448990982161 1.59369037876676 1.28453203295070 1.04813895916492 1.45373924182746 2.00180797445434 1.28537380591042 1.66366100731130 1.43178805587178 1.60395323267986 0.194911947772973 0.191155891682784 0.188424412274304 0.191496236423084 0.198701248206462 0.187810815132710 0.192153815905046 0.193147817612882 0.201146165503486 0.193755021285923 0.187810815132710 0.187810815132710 0.195124538726883 0.199699545573719 0.198979642240747 0.190153571069328 0.197142025442789 0.195339758481309 0.195265274658241 5 5|0 +|/ 13951356 13951941 13951609.2 13951338 13952012 + gene protein_coding_gene TRUE TRUE AT5G35760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01080.1); contains domain SUBFAMILY NOT NAMED (PTHR23421:SF6); contains domain BETA-GALACTOSIDASE RELATED (PTHR23421) -0.190134016862991 -1.90071619939267 0.0849069459116477 1 1.60862658230754 3.00850435305437 -0.190134016862991 0.0990852475241455 AT5G24600_at 1.36627945284300 1.3077824973491 1.89853027021407 1.81823800893774 1.36499801053228 1.24532722373694 1.41929342159289 1.19925595994511 1.27949349897226 1.56801270007461 1.9674232839485 1.34881842951869 1.56668259550160 1.51849461052760 1.69270380807635 1.88919474933796 1.82284485615695 1.77093971169980 1.42490386024604 0.211982289763894 0.217411583650782 0.214491259838845 0.213367758438780 0.219432270296237 0.217788897533860 0.211566343265380 0.217029185351572 0.219385322090182 0.214238104816507 0.211566343265380 0.213026691508149 0.222648154016985 0.211566343265380 0.221077999683827 0.219038446890839 0.216802382152950 0.211566343265380 0.214261650319254 5 5 - 8421823 8422197 8421983.636 8421632 8423483 - gene protein_coding_gene TRUE TRUE AT5G24600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18215.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55679.1); similar to Os02g0292800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046597.1); similar to Os08g0153900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061011.1); contains InterPro domain Protein of unknown function DUF599; (InterPro:IPR006747) 0.160333194896176 1.90052875066442 0.084933611322408 1 1.60836265323799 3.01310032665734 0.160333194896176 0.0466305490381083 AT5G23670_at 7.20188090747702 7.28020620514669 7.99266297017803 8.17611188692431 8.65958339501236 8.59798614849656 7.05513320019391 7.07511579534195 7.00044190710418 6.6569247067282 7.79005809852941 8.10399056243563 8.00654225068581 7.58030765591678 8.11140766634887 8.02804139110959 8.20326726883627 8.1653901448526 7.20533211933402 0.179697634279333 0.17101271411847 0.176380940707162 0.168525613409114 0.169140059302067 0.175952796593694 0.169680680776673 0.180202357882034 0.2025659629263 0.183021949893224 0.181401834103954 0.171429610247767 0.168525613409114 0.174733746647381 0.168525613409114 0.169816208422525 0.171722448817623 0.173194103856484 0.181731807358919 5 5|0 +|/ 7983789 7984975 7984464.4 7981644 7985401 + gene protein_coding_gene TRUE TRUE AT5G23670.1|AT5G23670.2 LCB2 (Serine palmitoyltransferase LCB2 (long chain base) subunit gene); serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. similar to serine C-palmitoyltransferase, putative [Arabidopsis thaliana] (TAIR:AT3G48780.1); similar to serine palmitpoyltransferase subunit2 [Nicotiana tabacum] (GB:BAE96963.1); similar to serine palmitoyltransferase [Lotus japonicus] (GB:BAC55228.1); similar to serine palmitoyltransferase [Solanum tuberosum] (GB:CAB44316.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.156542374369412 1.89934079392323 0.0851027837514044 1 1.60669027108798 15.2312643340438 0.156542374369412 0.0362927781093842 AT5G16570_at 8.6530517453919 8.9534081448991 9.6253200873799 9.5124805362372 9.35008865189117 8.83299150123296 7.37938543685618 7.60782902421226 8.06284431983041 6.90073109411568 8.60138200289735 7.51830076379141 8.6553087302966 8.33454125878957 7.68122498972453 9.64573896232567 8.9812135568665 7.8253096004545 7.41557345360255 0.182458319420246 0.184553357895518 0.189930567462301 0.185543357525165 0.186751214803116 0.192181718882673 0.188344646964653 0.193530454898002 0.198036844425399 0.196484490944535 0.187573414484569 0.185620522126563 0.187554834321690 0.198327342603533 0.188653502422682 0.181964251150333 0.181964251150333 0.189128570322930 0.194720794646540 5 5|0 -|/ 5421929 5422902 5422268.444 5421746 5424569 - gene protein_coding_gene TRUE TRUE AT5G16570.1 GLN1;4 (Glutamine synthetase 1;4); glutamate-ammonia ligase Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium Identical to Glutamine synthetase cytosolic isozyme 1-4 (EC 6.3.1.2) (GLN1;4) (Glutamate--ammonia ligase GLN1;4) (GLN1-4) [Arabidopsis Thaliana] (GB:Q9FMD9); similar to ATGSKB6 (Arabidopsis thaliana glutamine synthase clone KB6), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT3G17820.1); similar to ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G37600.1); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to cytosolic glutamine synthetase [Brassica napus] (GB:CAA73063.1); similar to Glutamine synthetase cytosolic isozyme (Glutamate--ammonia ligase) (GB:P04078); similar to glutamine synthetase [Hevea brasiliensis] (GB:AAB61597.1); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147) 0.199834058849689 1.89857103043168 0.0852125693321479 1 1.60560686144006 16.6718662771757 0.199834058849689 0.112488548824317 AT5G51700_at 6.29859061933141 5.74436484832516 7.02941638482817 6.9321910137031 7.30575858787363 6.99037128195164 5.13622845991892 5.20505996088597 5.21087823714243 4.75722279156301 5.79666022594021 5.83825449130765 5.73547971192918 6.0599091461814 6.0845981018412 6.26359153894782 5.84186925109772 5.68975285052718 4.86283902175883 0.218169737329721 0.213983378269538 0.217232201460020 0.214694780908225 0.210828891126034 0.2186733889706 0.210828891126034 0.227146552965158 0.225623402780904 0.226744485428791 0.220898679552922 0.210828891126034 0.215372519896727 0.217384398395493 0.210828891126034 0.213253950263571 0.21437295379313 0.215809264310809 0.216018590693708 5 5|0 -|/ 21018609 21020261 21019112.3 21018435 21020431 - gene protein_coding_gene TRUE TRUE AT5G51700.1 PBS2 (PPHB SUSCEPTIBLE 2) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation. similar to CHORD [Medicago truncatula] (GB:ABE79345.1); contains InterPro domain CHORD; (InterPro:IPR007051) 0.199647783447957 1.89844791438765 0.0852301406023541 1 1.60543359892696 11.7589531937071 0.199647783447957 0.112262456649792 AT5G37380_at 6.2405055187023 6.37232856189668 7.43362605180717 7.49975945565999 7.55034399954811 7.08309646632418 6.24608615683433 6.57818414277795 5.17490718902461 5.56131891553660 6.61440702355668 7.05038242931542 6.74092369135614 6.74187465731718 6.72224596138976 6.84470928337904 6.68160650965409 6.59964042605753 5.17822867330179 0.198642105427206 0.192709939661332 0.19762558058079 0.202877727159863 0.197234530289683 0.198868453960049 0.192024209166044 0.19814944298879 0.196029124744342 0.190623147965655 0.199532597797775 0.194348995726477 0.191436295186596 0.202849805767988 0.187209088554126 0.187209088554126 0.201743766808855 0.194005871504273 0.197563971762522 5 5 - 14834420 14834823 14834635.818 14833989 14836521 - gene protein_coding_gene TRUE TRUE AT5G37380.1|AT5G37380.2|AT5G37380.3 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding / unfolded protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25560.1); similar to Aminotransferase, class-II; Heat shock protein DnaJ [Medicago truncatula] (GB:ABE78703.1); similar to Os03g0401200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050318.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.192261448554457 1.89794760771559 0.0853015794801243 1 1.60472956350813 12.9026372977143 0.192261448554457 0.102433198773706 AT5G20340_at 1.67571652746729 1.25452052045408 1.24129623688656 1.30544572455730 1.30230246465446 1.24563685404884 1.32803411136722 1.18843378260672 1.89350955237093 1.64197363055847 1.27102432051151 1.57356261096685 1.57308317087117 1.69211432393808 1.72671394242262 1.29558411151827 1.89261499402622 1.59681771634035 1.38273902117384 0.206339862508275 0.204111728228153 0.202970593489712 0.204886388230480 0.209347303564669 0.210411935373715 0.212995971991930 0.203748850081394 0.209175650929263 0.207660164874238 0.208056871724869 0.204990650927105 0.207743167834180 0.209576220341212 0.206484572260391 0.204763424361215 0.213587440976059 0.206822571708283 0.206006181070655 5 5 + 6875277 6875829 6875476.364 6874789 6875853 + gene protein_coding_gene TRUE TRUE AT5G20340.1 BG5 (BETA-1,3-GLUCANASE 5); hydrolase, hydrolyzing O-glycosyl compounds Encodes a putative beta 1,3-glucanase. similar to BETAG4 ("beta-1,3-glucanase 4"), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20330.1); similar to Os01g0801500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044540.1); similar to beta-1,3-glucanase precursor [Oryza sativa] (GB:AAD10384.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.176032821690176 -1.89742845076037 0.0853757685753301 1 1.60399908919166 2.92622167785137 -0.176032821690176 0.0782047172879503 AT5G44080_at 5.85197685453501 5.98670649983008 6.40265002187669 6.6750467980405 7.39870737235564 7.28122686789372 6.03968556227868 5.83686555383371 5.53942408809601 6.25711748813891 6.6613449816508 6.96079057826605 6.73031960535379 6.96381874088919 6.25562364497503 6.7819841550112 6.13287183435354 6.86124040309914 5.98299579285901 0.203417894143647 0.196988931389578 0.207559212047694 0.214047986326497 0.215470927000999 0.216946161521055 0.198221662407411 0.212560961769105 0.209037174114973 0.202178804952915 0.196846647883454 0.199207165089479 0.202831211580438 0.204778493843540 0.211456323420580 0.196846647883454 0.211217650184002 0.209322994536875 0.203460828020182 5 5 - 17756021 17756493 17756259.091 17755879 17757098 - gene protein_coding_gene TRUE TRUE AT5G44080.1 bZIP transcription factor family protein similar to GBF4 (G-box binding factor 4), transcription factor [Arabidopsis thaliana] (TAIR:AT1G03970.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE83168.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.169268589833356 -1.89692575442528 0.0854476622932065 1 1.60329186046776 12.7316140409877 -0.169268589833356 0.0664155089821639 AT5G41010_at 7.72106378775162 7.89946426936504 8.64150931755142 8.57303660432714 8.8358826016995 8.11853829222256 7.89129974293998 7.78588877348004 7.25701621389475 7.34528389147574 8.12980183626458 8.24972466216375 8.10935510099242 8.12907452043417 8.13768761650869 8.17150353899066 8.18407078063566 7.47995474277307 7.5072368268143 0.125694078777711 0.123350275738792 0.132780568789201 0.123615924305631 0.124782071878638 0.123626584398682 0.128802927049615 0.126190125539629 0.137308237399128 0.122539385508115 0.125889476525077 0.131362410043614 0.124084392125528 0.123279003859241 0.124222915539014 0.121585327967662 0.130180561441204 0.137620846525258 0.130877890558333 5 0|5 /|+ 16441712 16441752 16441732.833 16441278 16442180 + gene protein_coding_gene TRUE TRUE AT5G41010.1 DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative similar to DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative [Arabidopsis thaliana] (TAIR:AT1G53690.1); similar to polymerase (RNA) II (DNA directed) polypeptide K isoform a [Mus musculus] (GB:NP_001034457.1); similar to unnamed protein product [Mus musculus] (GB:BAB31480.1); similar to metallothionein-I gene transcription activator [Mus sp.] (GB:AAB27565.2); contains InterPro domain RNA polymerase Rbp10; (InterPro:IPR006591) -0.213274471756708 -1.89548607923591 0.085653869216075 1 1.60126688608825 15.9052065456206 -0.213274471756708 0.12975748727848 AT5G18430_at 1.16347297267095 1.14734586826665 0.196902088497659 0.305420618541022 0.716802505251072 0.805282498290089 0.64336331999235 0.45799852625132 1.29776873905000 0.0518070208711419 0.513939590544983 1.399040442199 0.3836506194206 0.131323639121008 0.904731610732902 0.309915667990341 0.882227687606048 0.616447729785654 0.177775222383611 0.224281260422301 0.221826167858254 0.224651791066228 0.227347637067873 0.226225789433496 0.221826167858254 0.230026377528267 0.221826167858254 0.221826167858254 0.228670034796784 0.223641963733434 0.224525026358814 0.237015285736327 0.233921257901923 0.221826167858254 0.231191708653238 0.223788662660505 0.224198757812645 0.222343473562968 5 5 - 6110412 6111232 6110846.7 6110257 6112031 - gene protein_coding_gene TRUE TRUE AT5G18430.1 GDSL-motif lipase/hydrolase family protein similar to ATLTL1/LTL1 (LI-TOLERANT LIPASE 1), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT3G04290.1); similar to GSDL-motif lipase [Agave americana] (GB:AAS75127.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.157452134444800 -1.89427775727132 0.0858272943001283 1 1.59956785126735 1.25546185848347 -0.157452134444800 0.0402980259558363 AT5G26640_at 1.83297807324866 1.64689130254355 2.18036329255175 1.97772214167684 1.52677604823444 1.82170500506115 1.84459892461647 1.56265358557314 1.75286401421726 2.20879817145421 1.97456141226202 1.4987923847905 1.81832224408566 1.91266568924918 1.68275331841426 1.64762527953615 1.73322723591126 2.0815007371814 2.08162452545034 0.197817813324614 0.201096735838148 0.197796701785353 0.200744732741605 0.197796701785353 0.20495990141933 0.200011978059716 0.198809129848915 0.213518086442906 0.209568839811220 0.202121185713158 0.199136932095602 0.203138918160896 0.197805372433005 0.208072074770187 0.201704249420675 0.203535912541510 0.205381244108029 0.202886123049066 5 5|0 -|/ 9347867 9348149 9348046.667 9347844 9348177 - gene protein_coding_gene TRUE TRUE AT5G26640.1 similar to hypothetical protein MtrDRAFT_AC122723g15v1 [Medicago truncatula] (GB:ABE93355.1); contains domain RING FINGER (PTHR11210); contains domain RING FINGER 11 (PTHR11210:SF1) -0.179925288801459 -1.8927221346181 0.086051044147804 1 1.59738118636124 3.70326601738129 -0.179925288801459 0.0851611805069396 AT5G16950_at 5.51386657635755 5.06231663069258 5.9568240059247 5.89977400070364 5.75966600817004 5.89728837014168 4.27735001323826 4.72882260688819 5.14212361962501 4.3651096401918 4.79621273632935 5.15344739170647 5.034925111173 5.54015500171527 5.49169476384436 5.02244919145542 5.57682132602831 4.90011344994389 4.52269311701551 0.218901491962190 0.217044858452775 0.214462677455755 0.221163016912827 0.217209300507902 0.219977253416409 0.227577260067209 0.233706869061235 0.213448814165693 0.215882285130257 0.216388088197828 0.214625622951657 0.215667380904679 0.216815133497683 0.217853784524993 0.213448814165693 0.213457235593168 0.215167949694019 0.220550352241741 5 5 + 5572650 5572913 5572791.182 5572579 5573073 + gene protein_coding_gene TRUE TRUE AT5G16950.1 similar to hypothetical protein MtrDRAFT_AC157349g25v1 [Medicago truncatula] (GB:ABE78359.1) -0.199822818730113 -1.89132941303004 0.0862518209880982 1 1.5954241861193 10.3200482750822 -0.199822818730113 0.113468905769196 AT5G41920_at 4.51973320317 4.60910748402494 4.95162225248132 4.44901234648526 5.11133059259622 5.24688913199357 3.72359660969454 3.74566132961627 4.15957995816771 4.43959712188627 6.08974197862590 5.88383032594552 5.38639889439569 5.7159645535702 5.6407375765638 5.60926547974305 4.91090236771497 5.22452275940924 4.0353001244025 0.221401741221562 0.217633212005741 0.222773349207903 0.211801933352501 0.212871662995737 0.214244278096716 0.230602309693476 0.217049086387734 0.222916724168141 0.210285284508206 0.214982751994365 0.213410041693136 0.210599336776810 0.216201259684667 0.222744363238199 0.209086064936182 0.219163467032155 0.211130521562653 0.216366381479854 5 5 + 16797837 16798402 16798080.909 16796977 16798473 + gene protein_coding_gene TRUE TRUE AT5G41920.1 scarecrow transcription factor family protein similar to SCR (SCARECROW), transcription factor [Arabidopsis thaliana] (TAIR:AT3G54220.1); similar to Os07g0567700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060023.1); similar to SCARECROW [Pinus sylvestris] (GB:ABH85406.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.183929015011064 1.89115672114253 0.0862767466730336 1 1.59518157092776 9.42920056549853 0.183929015011064 0.0914847958857873 AT5G59770_at 7.10910127883106 7.16900204749124 8.60230105861706 8.10245385471057 8.50316339276404 8.06712973148574 8.21974896747306 7.9277552011262 7.35004052701544 7.15885376690551 7.69680959827337 7.58601276942281 8.20029079213914 8.09410446005579 7.82205564472662 8.17203586463327 7.64465352285039 8.02322171348482 6.88459226761742 0.164293726209091 0.175471545459876 0.174836896784782 0.178537318325238 0.168490710136128 0.162270061909761 0.171708659551454 0.169183498500626 0.177694360124661 0.182537759582472 0.169270559523927 0.160802706727164 0.162102227611606 0.160840858982510 0.163972619336886 0.160770937570689 0.172519368931070 0.16318938079469 0.181688713484118 5 5|0 -|/ 24096827 24098374 24097909.222 24096618 24098442 - gene protein_coding_gene TRUE TRUE AT5G59770.1 similar to PAS2 (PASTICCINO 2) [Arabidopsis thaliana] (TAIR:AT5G10480.2); similar to Protein tyrosine phosphatase-like protein, PTPLA [Medicago truncatula] (GB:ABE85916.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA; (InterPro:IPR007482) -0.209547194551703 -1.89080181796909 0.0863279929454347 1 1.59468299790596 15.4806120580012 -0.209547194551703 0.125845494627864 AT5G42910_at 1.11017887239692 0.866785544645858 1.26842836745462 1.15994280506233 0.63979184546803 0.78236450502561 0.802962812580899 1.09926070150028 1.31355770148003 1.29912251535289 1.03623781253997 1.06725802856848 1.11974326487489 0.917836901251417 1.15594886260674 1.43043297750605 0.91582902088199 0.948463302421248 1.20258208772044 0.197182855721507 0.191422813203685 0.191307977741590 0.199592867335238 0.196059889708709 0.197336623669665 0.195182396856112 0.193387553617119 0.201850793849413 0.216554464762213 0.194516718274241 0.191450684206235 0.194482404546909 0.192785764070076 0.202018277956658 0.197774580404581 0.201018750221061 0.205565310812997 0.196497030612359 5 5|0 +|/ 17221691 17222381 17221876.1 17220970 17222608 + gene protein_coding_gene TRUE TRUE AT5G42910.1 basic leucine zipper transcription factor (BZIP15) similar to ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2) [Arabidopsis thaliana] (TAIR:AT1G45249.1); similar to abscisic acid responsive element-binding protein 2 [Populus suaveolens] (GB:ABF29696.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.172480085139799 -1.89059532014515 0.0863578231647924 1 1.59439292614101 2.13907586819139 -0.172480085139799 0.073242988180044 AT5G35700_at 5.08105618459162 5.20681538459376 5.50545428816624 5.7087109378809 6.22708719874451 5.42418096356451 5.53965818781518 4.95476881954758 4.71477383374905 5.34968527206649 5.69254226406161 6.45725045093821 6.1977604603949 5.59689024944972 5.71161723435993 5.98015595693933 5.89270800791685 6.3389571550084 5.07998820910199 0.221140759659216 0.217016046564523 0.214035709032423 0.224931661433801 0.220416814245203 0.211019891673466 0.213830467239858 0.209765972185347 0.227466526105822 0.212867588269728 0.208220752112196 0.208169045133657 0.208169045133657 0.225942659704321 0.213806574363125 0.209325798014982 0.209994037422077 0.215441281464131 0.208169045133657 5 5 - 13890145 13890798 13890380.455 13889765 13894087 - gene protein_coding_gene TRUE TRUE AT5G35700.1 fimbrin-like protein, putative Identical to Fimbrin-like protein 2 (FIM2) [Arabidopsis Thaliana] (GB:Q9FKI0); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT2G04750.1); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G55400.1); similar to Os02g0588300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047274.1); similar to Os02g0719100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047943.1); similar to fimbrin/plastin-like [Triticum aestivum] (GB:AAC49813.1); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) -0.254238485620251 -1.88904238038807 0.0865824628902931 1 1.59221193513553 10.9717836592911 -0.254238485620251 0.176810944915402 AT5G18620_at 6.24202557559662 6.35429322586234 6.89307704636452 6.69674820085401 7.16153118216265 6.57753010892925 6.65867099309653 6.21987621011255 5.52257563387621 5.63356244212757 6.66527870470994 7.86442172498459 6.30345127172167 6.86685476480234 7.11245122456622 7.19674202956742 6.65354034752566 6.87662014923084 6.07079717025767 0.197415822869064 0.196638404138631 0.192289939236396 0.202537816945670 0.202502664787412 0.202988084226827 0.210309010910718 0.202121123346785 0.212948996595448 0.196066246061096 0.199216278983208 0.199638856135417 0.194803755829877 0.207057820516301 0.199727168114310 0.197730173643594 0.199753427110655 0.203283389378827 0.192289939236396 5 5|0 -|/ 6196373 6197169 6196629.889 6195919 6202168 - gene protein_coding_gene TRUE TRUE AT5G18620.1|AT5G18620.2 CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase similar to CHR11 (CHROMATIN-REMODELING PROTEIN 11), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT3G06400.1); similar to Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] (GB:AAK53826.1); similar to Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily) (ISS) [Ostreococcus tauri] (GB:CAL54689.1); similar to chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas reinhardtii] (GB:AAY86155.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.214523109555194 -1.88765572200957 0.0867835056140057 1 1.59026515484414 12.9428349558185 -0.214523109555194 0.132332758977438 AT5G19490_at 3.07660835772469 2.82957500911827 3.69332348781626 3.99120685628469 3.75558706099416 3.97516827570327 2.33702710811582 3.03575283718094 2.89012252604309 2.55310209066558 2.58211830518782 2.85713810627445 2.91363348584483 2.97169008296161 2.76843585962708 3.11328222529368 3.17883489359891 2.70887343702934 2.30503625028210 0.232375928399207 0.232375928399207 0.244998905887768 0.237655544743402 0.242613001105092 0.24427681366991 0.233740143429203 0.237517674127760 0.232375928399207 0.235103604872425 0.234127399257697 0.237415981048340 0.238459727459034 0.240567096012620 0.241370485489074 0.23552731067484 0.232375928399207 0.234411764256665 0.234728230159554 5 5 - 6576815 6577515 6577191.182 6576771 6577843 - gene protein_coding_gene TRUE TRUE AT5G19490.1 repressor protein-related similar to transcription factor, putative [Arabidopsis thaliana] (TAIR:AT3G12480.1); similar to Os05g0494100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055923.1); similar to Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula] (GB:ABE81057.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958) 0.223753783071073 1.88677217077235 0.0869118309828206 1 1.58902504048985 6.071533335021 0.223753783071073 0.143352944437627 AT5G22290_at 7.77059260411184 7.78202145153966 9.21801813622012 9.40767379298417 9.5197827506087 9.0579379754977 8.02905807119038 7.46764922707783 6.38546733809886 6.42100040548022 6.75863923860611 6.82500599239286 7.84326683728825 7.64927316278328 6.22557624401297 7.97489379224231 8.8080163251579 6.9774310214916 6.98054336901415 0.23259405011749 0.223595762348222 0.228908765413444 0.225028002825669 0.235638547038467 0.241520784323195 0.22237220316771 0.226195461789877 0.242520904179956 0.226561641386522 0.221888677844111 0.227265610359712 0.227907015311554 0.225794555317608 0.228054435386175 0.228252446017229 0.231969981897979 0.234163825103993 0.226951755599805 5 0|5 /|- 7376068 7376672 7376348.4 7375926 7377647 - gene protein_coding_gene TRUE TRUE AT5G22290.1 ANAC089 (Arabidopsis NAC domain containing protein 89); transcription factor similar to ANAC060 (Arabidopsis NAC domain containing protein 60), transcription factor [Arabidopsis thaliana] (TAIR:AT3G44290.1); similar to no apical meristem, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP55107.2); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.212510099791515 1.88669372545617 0.0869232327081678 1 1.58891495066585 15.5208083499595 0.212510099791515 0.130030788544348 AT5G03545_at 0.80438351160147 1.07854037053736 -0.696308139194881 0.550890801377347 1.22251094167883 0.391749717125909 0.684755801279024 0.738904091845266 0.914585909173576 1.28121304493019 0.424408798689504 1.01135158883069 1.38285422208074 0.201066449729764 0.057404110859329 0.944517745489311 0.102047529028023 0.319175540935489 -0.165904589046668 0.390798494708307 0.390798494708307 0.409793939642353 0.390798494708307 0.412190616281932 0.403739530464561 0.390798494708307 0.390798494708307 0.390798494708307 0.390798494708307 0.390798494708307 0.390798494708307 0.421217144608726 0.456271515839379 0.390798494708307 0.390798494708307 0.390798494708307 0.417460841729278 0.390798494708307 5 5 + 895122 895153 895137.333 894705 895399 + gene protein_coding_gene TRUE TRUE AT5G03545.1 unknown protein -0.340592115628074 -1.88626121461651 0.0869861213184478 1 1.58830800380718 1.21292073864348 -0.340592115628074 0.263802717124775 AT5G50130_at 4.76312725449944 5.10139829007998 5.8403492713775 5.99382269157489 7.09589312635914 6.18017612052058 4.46609693339246 4.35410860365402 3.6730174912252 3.60717138446242 3.87093860939053 3.97895903858779 4.78278765751368 4.72141519113457 4.35915293749512 4.08733053629608 4.71986286226533 3.88996142924856 3.63311368980753 0.253230673609205 0.246697312470475 0.264973655150895 0.254761992555840 0.254430272044642 0.270097384067724 0.258083117650075 0.260872441555638 0.253756501058306 0.266966002874514 0.246697312470475 0.255205288969217 0.250853237741230 0.269670066749162 0.254537392079011 0.252051323034333 0.298485364236459 0.250280801113497 0.255121482437749 5 5|0 +|/ 20409226 20410240 20409749.875 20407223 20410489 + gene protein_coding_gene TRUE TRUE AT5G50130.1|AT5G50130.2 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT4G24050.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE79697.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.249471805465192 1.88622334416789 0.0869916298172378 1 1.58825486280628 9.44390581371884 0.249471805465192 0.172105486801614 AT5G15490_at 6.35980907233187 6.81227853468851 6.96344264791766 7.08903266583059 6.39697975453957 6.74219734832962 6.11489761172557 7.04955574623508 5.31737424561334 5.21476721440083 7.92006745639288 8.62968936071302 7.11702696261142 7.89755193342175 8.5544739325062 7.54943374253495 7.27031451232831 7.33456919349868 5.59038875140459 0.234378400538830 0.225800508398388 0.223083911592213 0.22670691363161 0.226039785753699 0.241682511145456 0.230049472644131 0.2227194866744 0.233008417923861 0.233580915675679 0.2227194866744 0.2227194866744 0.2227194866744 0.230027038556945 0.225482234933654 0.2227194866744 0.233065132149715 0.232446052145346 0.228313528203658 5 5 - 5028016 5028447 5028208.364 5027642 5030197 - gene protein_coding_gene TRUE TRUE AT5G15490.1 UDP-glucose 6-dehydrogenase, putative similar to ATUGD1/UGD1 (UDP-glucose dehydrogenase 1), UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G26570.1); similar to UDP-glucose 6-dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G29360.2); similar to UDP-glucose 6-dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT5G39320.1); similar to UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (GB:Q96558); similar to putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum] (GB:AAT40105.1); similar to putative UDP-glucose dehydrogenase 2 [Nicotiana tabacum] (GB:AAT40106.1); contains InterPro domain UDP-glucose/GDP-mannose dehydrogenase; (InterPro:IPR001732); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927) 0.266797519387522 1.88508257214347 0.0871577135551362 1 1.58665432117229 13.2701829846451 0.266797519387522 0.190616588256786 AT5G41670_at 7.450721586513 7.78285704243362 7.93474667245535 7.93572002095363 8.15520564864366 7.97250367116957 8.29142539297803 8.24718931051478 6.2153240724201 7.0732400055199 8.39712644753473 8.75010367615862 8.13317231821442 8.17295489415551 8.31623456245048 8.0948307168487 7.72201837508299 8.19307314597538 6.82494155692204 0.159633696333615 0.157454121461013 0.166858038821316 0.159832732585703 0.156998577931659 0.156803300133745 0.160555759376569 0.158863626075323 0.194385668202142 0.166829505941857 0.158932835868132 0.164278896090213 0.162230680015403 0.156344484012695 0.156812241572739 0.1601382293807 0.158103237024091 0.155786612389116 0.169509423142128 5 5 - 16682903 16683373 16683127.364 16682511 16684399 - gene protein_coding_gene TRUE TRUE AT5G41670.1|AT5G41670.2 6-phosphogluconate dehydrogenase family protein similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G64190.1); similar to 6-phosphogluconate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT3G02360.1); similar to cytosolic 6-phosphogluconate dehydrogenase [Spinacia oleracea] (GB:AAK51690.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96861.1); similar to plastidic 6-phosphogluconate dehydrogenase [Spinacia oleracea] (GB:AAK49897.1); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD-binding; (InterPro:IPR006115); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal; (InterPro:IPR006114); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal extension; (InterPro:IPR012284); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, decarboxylating; (InterPro:IPR006113); contains InterPro domain 6-phosphogluconate dehydrogenase; (InterPro:IPR006183); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal core; (InterPro:IPR012283) -0.167974352587854 -1.88461759706963 0.0872254927576504 1 1.58600207073139 15.4347667408777 -0.167974352587854 0.0660451855383363 AT5G66260_at 1.72028841373510 1.82599856592237 1.51629104128466 2.11525169586719 1.43064922459733 1.817165008136 1.49757417676499 1.78308028713482 2.0670254271537 1.64288368589009 1.60530799542786 1.34867409963072 1.97119836716673 1.27838474903472 1.79124020699989 1.52793886023230 1.88108506305534 1.43559295496144 1.67288219819557 0.194039143196723 0.189722239548517 0.195420600443122 0.197916001836274 0.189811487744092 0.197458586328945 0.190460083993025 0.201902607831385 0.201502331195377 0.189709014315992 0.194581761434842 0.196805239574796 0.199063270088370 0.199967272199556 0.194101148960119 0.193182796784922 0.200061091686834 0.194508116923763 0.191968886334356 5 5|0 +|/ 26488508 26488839 26488684.2 26488495 26488884 + gene protein_coding_gene TRUE TRUE AT5G66260.1 auxin-responsive protein, putative similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G36110.1); similar to auxin-induced SAUR-like protein [Capsicum annuum] (GB:AAM12780.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) -0.215509912721045 -1.88310561368121 0.0874462306026977 1 1.58388161658840 3.41288308041868 -0.215509912721045 0.134140997395219 AT5G14070_at 3.12297931300935 2.67193194332384 2.32508395079423 2.51027470089023 2.42708240225162 2.72873506823219 3.27570735346207 2.74505900012767 2.37059377535385 1.74958883383640 2.57880781663214 3.03972658224716 3.16465066898507 2.6624156103484 3.02975349847571 3.04259259190157 3.10956040770554 2.41505400677825 2.55250990168938 0.232725610514491 0.233597599534317 0.225060566772252 0.234282133075387 0.234196952899315 0.229691835237117 0.236589450227094 0.227118468335046 0.226176693730805 0.229365270098557 0.234604189540091 0.230947010565841 0.226765780169739 0.232845329647696 0.236189524418911 0.227587235402448 0.237285855175511 0.225060566772252 0.226208789081499 5 5 + 4541932 4542312 4542112.182 4541838 4542516 + gene protein_coding_gene TRUE TRUE AT5G14070.1 glutaredoxin family protein Identical to Glutaredoxin-C8 (AtGrxC8) (GRXC8) [Arabidopsis Thaliana] (GB:Q8LF89;GB:Q9FMU3); similar to ROXY1, thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G02000.1); similar to glutaredoxin family protein [Musa acuminata] (GB:ABF69994.1); similar to Os04g0393500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052649.1); similar to Os02g0512400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046942.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin-like, plant II; (InterPro:IPR011905) -0.216236677207111 -1.88175782556565 0.0876434320185415 1 1.58199208366439 5.27813220893345 -0.216236677207111 0.13519560981056 AT5G15240_at 2.22917207259615 3.31029569152363 3.25501328939895 3.76612612609976 3.21891229760340 2.71893179395958 2.88296544608791 3.96191506659732 3.62499797281627 3.23172802280792 3.00711044912683 3.88431628487953 3.59489402138133 3.66928141777574 2.71047020329049 3.87094169038334 3.24896731929992 3.43991425698903 2.98015506982215 0.241666827078562 0.232010257001254 0.249907160956721 0.233755668351579 0.239275041734730 0.239441621692117 0.235541620935308 0.235489088180753 0.245471843542117 0.242032301248101 0.231086195073834 0.233379289126809 0.239908366621424 0.235877982837579 0.238332225291504 0.230910230518055 0.266795533001364 0.236786225606636 0.234595605645089 5 5 + 4949534 4950137 4949900.545 4947670 4950343 + gene protein_coding_gene TRUE TRUE AT5G15240.1|AT5G15240.2 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28960.1); similar to Amino acid/polyamine transporter II [Medicago truncatula] (GB:ABD32522.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -0.369056819364456 -1.88099795292275 0.0877547936187524 1 1.58092704931057 6.52151512825312 -0.369056819364456 0.291851310989709 AT5G01560_at 0.880625547285553 0.847923927125635 1.07478124776561 1.01321099074716 1.04511466263452 0.835433301146898 0.632535392012109 0.498497611575094 0.67001029231939 0.525437644549813 0.694693227865478 0.889145337518909 0.594628531470505 0.353151091071489 0.727876757906176 0.534936268859282 0.745992327950776 0.820909245082268 0.37862935893021 0.203772462147052 0.202036185455 0.202036185455 0.209647861129608 0.208513524578960 0.209019824527022 0.204964783123123 0.209813019355245 0.212903530102691 0.211941414504156 0.202036185455 0.203474932899854 0.208678163651888 0.209090570286579 0.202818651401079 0.202036185455 0.202036185455 0.207355558691244 0.209022022919962 5 5 - 218192 218674 218475.091 218137 220529 - gene protein_coding_gene TRUE TRUE AT5G01560.1 lectin protein kinase, putative similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08870.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01540.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01550.1); similar to receptor lectin protein kinase-like [Cucumis melo] (GB:AAU04770.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.157735026342538 1.87843726463948 0.0881310327161512 1 1.57733943485886 1.45094485023595 0.157735026342538 0.0447247357447811 AT5G22060_at 9.05012248726773 9.22987966791465 9.99255579922398 10.1890966863434 9.33475345489557 9.13023409022145 7.87369233139814 8.13958631600665 7.69511909573596 7.21816145674457 8.46269471854537 8.6398808023782 8.1123142971023 8.13149372117216 8.09120780561187 8.30699401701255 8.21977378149464 8.15654400908867 7.03200799233593 0.186059731375195 0.183285117475793 0.188325394870112 0.181981771912087 0.184309573479109 0.183023669114498 0.189347023402528 0.190847247358373 0.203171817640720 0.182951120095256 0.181981771912087 0.181981771912087 0.190098761838476 0.195175164972799 0.197904268807438 0.181981771912087 0.197465611913564 0.186228897817349 0.191936246158771 5 0|5 /|- 7303827 7304395 7304124.9 7303625 7305800 - gene protein_coding_gene TRUE TRUE AT5G22060.1 ATJ2 (Arabidopsis thaliana DnaJ homologue 2) Co-chaperonin similar to E. coli DnaJ Identical to Chaperone protein dnaJ 2 (AtDjA2) (ATJ2) [Arabidopsis Thaliana] (GB:P42825;GB:Q43293;GB:Q9C582); similar to ATJ3 (Arabidopsis thaliana DnaJ homologue 3) [Arabidopsis thaliana] (TAIR:AT3G44110.1); similar to DnaJ-like protein [Solanum tuberosum] (GB:ABB16989.1); similar to DnaJ-like protein [Lycopersicon esculentum] (GB:AAF28382.1); similar to seed maturation protein PM37 [Glycine max] (GB:AAD51625.1); contains InterPro domain DnaJ central region; (InterPro:IPR001305); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.171675600499510 1.87624715280100 0.088454004096524 1 1.57427277195073 16.9075946419870 0.171675600499510 0.0741249398825898 AT5G18400_at 6.74556015352804 6.90935333820013 8.14261762115922 7.65110084283319 8.63341154003383 7.6591568244026 7.05201420262506 6.46584992045024 5.73403898096314 5.8289483138492 7.43152649835907 7.71927674998778 6.99912382200001 7.4077562698206 6.91558603288762 7.10932166861359 7.06929407230323 6.89440904654965 5.75179413016356 0.217623321245042 0.223366727421524 0.217623321245042 0.217623321245042 0.219773011553289 0.221727576290872 0.217623321245042 0.225370332956239 0.232516823289270 0.224541174293438 0.217623321245042 0.217623321245042 0.221433591961517 0.219561706350622 0.226787623481563 0.217623321245042 0.225851148758084 0.224954094443604 0.217623321245042 5 5|0 -|/ 6093092 6094059 6093556.625 6092684 6095055 - gene protein_coding_gene TRUE TRUE AT5G18400.1|AT5G18400.2|AT5G18400.3 similar to Protein of unknown function DUF689 [Medicago truncatula] (GB:ABE78163.1); contains InterPro domain Protein of unknown function DUF689; (InterPro:IPR007785) 0.289820180699877 1.87195360176984 0.089090336456374 1 1.5682655372692 13.8898233445993 0.289820180699877 0.216226782981198 AT5G16070_at 6.67659378056608 7.38845686989697 7.02710314819652 7.7755566309602 7.90427632366165 7.69546631738568 6.85777975358623 6.82988155186792 5.8955465949393 6.77428405529229 7.52393704528304 7.63913430575987 6.80754333512776 7.03775639309965 7.53542404959372 7.07515348558131 6.93997466802819 7.65332494598487 6.51222644190123 0.199316299745751 0.198255553860870 0.203366449854898 0.201187532569617 0.201303268249523 0.219654989667258 0.206547779437169 0.206827645287064 0.214939565627477 0.208440751351764 0.201783449982507 0.198255553860870 0.209436853495588 0.217778276489035 0.206339752929196 0.199260618287614 0.218835678622811 0.214388545005479 0.198255553860870 5 5|0 -|/ 5247599 5248655 5248110.778 5247357 5251182 - gene protein_coding_gene TRUE TRUE AT5G16070.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G02530.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96914.1); similar to Chaperonin complex component, TCP-1 zeta subunit (CCT6) (ISS) [Ostreococcus tauri] (GB:CAL56563.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96959.1); contains InterPro domain T-complex protein 1, zeta subunit; (InterPro:IPR012722); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) -0.257066394957523 -1.87103322426033 0.0892272907784021 1 1.56697862760529 14.1046643266493 -0.257066394957523 0.182432089428292 AT5G46370_at 2.12305567503025 2.06708114355888 1.90507670080219 2.24587663632447 2.18799911037114 2.34133407013073 2.22251673215674 2.17400126141386 2.05555639187843 2.47421123804301 2.18268285274871 2.24411186189682 2.40347343400546 2.24440606681071 1.96412209515135 1.71764046403688 2.61936162233984 2.50283802168982 2.02292858723530 0.216476265531931 0.210358504709457 0.226009191019419 0.216005734584146 0.212471391919559 0.209332381663363 0.209332381663363 0.211274466250110 0.21107981956311 0.230473512590544 0.215164835984589 0.213158462199406 0.213201935289304 0.213440035941449 0.216064817817568 0.209918295670508 0.210068444378175 0.213453595268486 0.215239129316537 5 5 - 18826851 18828089 18827641.455 18826803 18828999 - gene protein_coding_gene TRUE TRUE AT5G46370.1 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2); calcium ion binding / outward rectifier potassium channel Encodes AtTPK2 (KCO2), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK2 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo. Identical to Probable calcium-activated outward-rectifying potassium channel 2 (AtKCO2) (KCO2) [Arabidopsis Thaliana] (GB:Q9FL25;GB:Q9SCY7); similar to KCO6 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6), outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18160.1); similar to putative outward-rectifying potassium channel KCO1 [Oryza sativa (japonica cultivar-group)] (GB:BAD33183.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain K+ channel, two pore; (InterPro:IPR003280); contains InterPro domain Ion transport 2, bacterial; (InterPro:IPR013099); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) -0.166650793915497 -1.87044577261436 0.0893148064205619 1 1.56615737989601 4.3678984785838 -0.166650793915497 0.0659297627298932 AT5G40940_at 0.0548503348365155 -0.403645569791614 -0.49459782073711 -0.431415514138442 -0.333684105027396 -0.304184885756431 -0.0349640092298885 -0.226780544293796 0.000522772522965276 -0.60513598875499 -0.666217991375807 -0.419958051089373 0.0736307852175009 -0.228048881601810 0.0881961507168234 -0.443515774273400 -0.202485585269163 0.349453123462362 0.0440023433675071 0.201331086534898 0.199260898420539 0.198038992663682 0.201953529539720 0.195512312691240 0.197641046630339 0.196781006088430 0.195512312691240 0.200992641562661 0.206340242506274 0.204805108221014 0.199215105773145 0.211527903273952 0.199182546909617 0.202108921818303 0.198399039790201 0.195512312691240 0.196644888547005 0.201405086328751 5 5 - 16424053 16424447 16424236.455 16423884 16425158 - gene protein_coding_gene TRUE TRUE AT5G40940.1 FLA20 (PUTATIVE FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 20) Identical to Putative fasciclin-like arabinogalactan protein 20 (FLA20) [Arabidopsis Thaliana] (GB:Q9FGW0); similar to Beta-Ig-H3/fasciclin [Medicago truncatula] (GB:ABC75366.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -0.178871690589353 -1.87030135323576 0.0893363334216526 1 1.56595550205738 -0.455797048757994 -0.178871690589353 0.0868510800871998 AT5G42280_at 0.416459569760295 0.797126087064834 0.93951974201547 0.968270843768006 1.01643356661494 0.675257772914279 1.29272891488974 1.19390069263925 1.28731917588303 1.02396994395678 1.67513939357542 2.12378627914998 1.45502615414960 1.79000143831571 1.79686039779568 1.69145458245897 1.31788452161797 1.75299107008158 1.16861739365910 0.21852682396094 0.221797646111522 0.21852682396094 0.220905675492587 0.221449538807903 0.225773087155817 0.225888698844597 0.218726594192646 0.221603766955114 0.222090097923835 0.221775091826835 0.223494315250885 0.218990567968546 0.228532826394725 0.220163798605524 0.220392959690823 0.220778001001063 0.235885524246671 0.21852682396094 5 5 - 16922756 16923277 16922997.455 16922430 16925235 - gene protein_coding_gene TRUE TRUE AT5G42280.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55380.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55440.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G55430.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.181001227569013 1.86953743189401 0.0894502823279772 1 1.56488776691321 2.34264305744639 0.181001227569013 0.0902379374173566 AT5G01700_at 1.99705110147294 2.40174335754174 2.60126871994531 2.48841820913844 1.95923328984083 1.95406267446592 2.31566155134381 1.9030457992934 2.75528039336418 2.46311869399014 2.47196685499483 2.66139573618329 2.71883745406921 2.43147946159948 2.18780609372571 2.16592995448014 2.51789803123419 2.86562650722429 2.26236097301059 0.187208731039117 0.189268610937242 0.186540064272409 0.198783595107053 0.195715832163487 0.197345974133565 0.191799397503697 0.191371692223971 0.194113500178484 0.190869752843694 0.190199388980759 0.188840140918051 0.187474612427548 0.186257308743716 0.187525524363141 0.189800401146289 0.192734891161904 0.186843392838698 0.191292512418783 5 5 - 260991 261671 261339.364 260723 263448 - gene protein_coding_gene TRUE TRUE AT5G01700.1|AT5G01700.2 protein phosphatase 2C, putative / PP2C, putative|protein phosphatase type 2C similar to protein phosphatase type 2C [Arabidopsis thaliana] (TAIR:AT3G02750.2); similar to Os12g0108600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065952.1); similar to Os11g0109000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065550.1); similar to Protein phosphatase 2C-like [Medicago truncatula] (GB:ABE89793.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.188854247306777 -1.86799588547929 0.0896806323071843 1 1.56273375148582 4.7006626871189 -0.188854247306777 0.101909885018622 AT5G59930_at 1.17152239625278 1.30864456937619 2.01549721857079 1.74514164636898 1.18137181249369 0.960606393466873 1.56618032133610 1.38912480002099 1.86445358995339 1.24141772070290 1.62639126796977 1.38061857831993 0.63709071547774 0.76245796518503 1.11783827614428 1.27623323547281 1.62937105658550 1.74178874249759 1.50058399033484 0.172717527970931 0.170528192226342 0.176051000376961 0.172622671431277 0.172852961425024 0.165799721213634 0.169902628468610 0.166635178103308 0.177106322410542 0.183953013774174 0.180707158139411 0.166873142293707 0.175871285088758 0.172455560629271 0.175165240603254 0.169569607677979 0.168766355652040 0.170332764761958 0.170853412402068 5 5 + 24153290 24153685 24153491.364 24151752 24153722 + gene protein_coding_gene TRUE TRUE AT5G59930.1 DC1 domain-containing protein / UV-B light-insensitive protein, putative similar to DC1 domain-containing protein / UV-B light-insensitive protein, putative [Arabidopsis thaliana] (TAIR:AT5G59940.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01350.1); similar to ULI3 (UV-B light insensitive 3) [Arabidopsis thaliana] (TAIR:AT5G59920.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) -0.169574633978266 -1.86785113768131 0.0897022897162257 1 1.56253153604478 2.82074055975428 -0.169574633978266 0.0717667212833116 AT5G56795_at 14.0197233243041 14.1469795444710 14.6352809193292 14.5342866935322 14.4338855926968 14.3765106544475 14.2848327562863 14.4018774900799 14.5286694180418 14.7166132194912 14.8341087210319 14.5672744014889 14.7685146795659 14.7537190165991 14.5016450244687 14.6299002381886 14.7365801162753 14.7266514620714 14.5135940368052 0.0745625751187208 0.0679892475111753 0.0723194476830971 0.0679892475111753 0.0679892475111753 0.0679892475111753 0.0731234698719993 0.0778632347771026 0.0801997172079007 0.0679892475111753 0.0682664999781963 0.0679892475111753 0.0715616719755376 0.0754537982354873 0.070885855553797 0.0679892475111753 0.0797843555765864 0.0679892475111753 0.0679892475111753 5 0 / Inf -Inf NA 22989268 22989675 - gene protein_coding_gene TRUE FALSE AT5G56795.1 MT1B (metallothionein 1B) one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive. -0.153844977244488 -1.86754169488167 0.0897486052365778 1 1.56209926265094 28.9922178380137 -0.153844977244488 0.0360458086491442 AT5G38360_at 3.1526679853618 3.24336068791664 4.30507495497819 3.7108286410008 4.84645203222738 3.56611198668978 3.69131088229477 2.95333124788449 3.53181118707115 3.46994975480506 5.17712409576274 5.41206600699144 5.01241564035324 5.04779884349043 5.23127977507279 4.84364459854627 4.04549506166476 3.90030584567242 3.58489858033891 0.232023223780741 0.236114126025545 0.231772688832182 0.233713305412343 0.237415016305484 0.242873888440354 0.231804297889205 0.250753774697823 0.238726164658601 0.237672515853823 0.251136110446491 0.240659354795498 0.237546578676152 0.253887256737086 0.258392702687325 0.233456887574951 0.247224618776774 0.231772688832182 0.231772688832182 5 5|0 -|/ 15349638 15350632 15350043.25 15348941 15350855 - gene protein_coding_gene TRUE TRUE AT5G38360.1 catalytic similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G33990.1); similar to SP1L1 (SPIRAL1-LIKE1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G26360.1); similar to OSJNBa0072D21.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD40743.2); similar to hydrolase or acyltransferase, alpha/beta hydrolase superfamily [Leptospira interrogans serovar Lai str. 56601] (GB:NP_712682.1); similar to hypothetical protein LIC11465 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] (GB:YP_001426.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.349937606080134 1.86753519309089 0.0897495786215207 1 1.56209018038409 7.86496867271888 0.349937606080134 0.276088007940269 AT5G43750_at 10.5106935660177 10.6223148110816 10.6054014413893 10.7638916214754 11.0642243339267 10.5909622572531 11.1969346675956 11.2415479476786 11.1679350118447 11.3093776078786 12.1209866857183 12.28809713024 11.8129748871214 12.1464602858064 12.1751456539098 12.1226569684976 11.5096215743326 12.1039322612145 10.9170639010676 0.0957451858100373 0.0888237067125652 0.0992390209449798 0.0859790498856826 0.0895299151640033 0.098360871096785 0.0953934935382647 0.0881306116749147 0.102280508708110 0.0896814293770949 0.0859790498856826 0.0870154109298213 0.0859790498856826 0.0877312479573337 0.0934291023078305 0.0859790498856826 0.0966552413609363 0.092662260744403 0.0892870191413068 5 5|0 -|/ 17597458 17598307 17597834.8 17597193 17598449 - gene protein_coding_gene TRUE TRUE AT5G43750.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD88171.1) -0.179871899609515 -1.86731960270967 0.0897818602291444 1 1.56178903320642 22.4077179663616 -0.179871899609515 0.0888405705898878 AT5G07690_at 7.80016652300944 7.6282903639147 8.39679064377944 8.28960954274116 9.3031961819578 8.8567424697266 9.01697315993907 9.06641536356684 6.94109992215824 9.44359667076317 10.2138265038177 10.1996525213241 10.0068418258212 10.1174967480959 9.83940348075778 9.64179780350461 10.1426295945745 10.4770419522593 9.07523429790609 0.186486962032934 0.172990049215632 0.175726438029241 0.174898603979849 0.166363412343806 0.175702577331287 0.174161331431300 0.168010905488054 0.213697469104584 0.169165646473096 0.175384690276013 0.168815215933139 0.166113139088708 0.170329890136675 0.178779485977538 0.167378689985944 0.170649353127826 0.176772678318132 0.172593946557766 5 5 + 2447744 2448220 2447975 2446765 2448544 + gene protein_coding_gene TRUE TRUE AT5G07690.1 MYB29 (myb domain protein 29); DNA binding / transcription factor Encodes a putative transcription factor (MYB29). similar to MYB76 (myb domain protein 76), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G07700.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE79445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.177558942478669 1.86709658560559 0.0898152651428621 1 1.56147752881178 17.828012998102 0.177558942478669 0.0852712963413734 AT5G54630_at 8.90270086679428 9.1104256815855 9.59496103178762 9.58990060949102 10.4330666529035 9.91974948055246 9.7643354898488 9.54166173011634 9.57165274593851 9.54029687935587 10.3554928391265 10.2074455312373 10.0838751101077 10.0678102055014 9.8547910954798 10.2586848551913 9.68299679078952 9.9190658929506 9.69063499944614 0.0983067567199669 0.0907788064977376 0.0944907954434953 0.092831355044336 0.0917117229472614 0.0996073101462967 0.0903807805227416 0.0929921975750213 0.0935193630569862 0.097731967774584 0.094694774687776 0.0918237801075567 0.0908726861874248 0.0942268691861813 0.0934596311774157 0.0919666367380104 0.0946552469767726 0.0955045019022666 0.0981671543399819 5 5 - 22209833 22210269 22210093.091 22209725 22211534 - gene protein_coding_gene TRUE TRUE AT5G54630.1 zinc finger protein-related similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G27240.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE93174.1) -0.189722446148362 -1.86682435118676 0.0898560576615575 1 1.56109730212559 19.4344161086990 -0.189722446148362 0.103291069395332 AT5G19420_at 4.60730532555522 4.76415593097751 5.4055653332819 5.60365844642966 5.79822344058144 5.86252197562958 4.01524420547856 4.40596970119988 4.42925334138861 4.30277478163267 5.19725717682105 5.04536501148516 5.69939967657814 5.78673180504482 4.74350907555659 4.97551708098765 5.42148554411595 5.31754115666697 4.19369734083338 0.194866174238482 0.193659098490735 0.196787659713823 0.194073815848547 0.196210568423637 0.205896413489904 0.194919490385609 0.19820585192394 0.193681107394740 0.188901435214119 0.19050196402744 0.190459579632408 0.194602401589610 0.189794472665195 0.196271876909012 0.189516023440196 0.195266565379541 0.207917793511144 0.190350750940516 5 5|0 -|/ 6548193 6548530 6548367 6547640 6552850 - gene protein_coding_gene TRUE TRUE AT5G19420.1 zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein similar to zinc finger protein, putative / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT5G42140.1); similar to zinc finger protein (PRAF1) / regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT1G76950.1); similar to Ran GTPase binding / chromatin binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G12350.1); similar to Pleckstrin-like; Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89832.1); similar to unknown prtein [Oryza sativa (japonica cultivar-group)] (GB:AAT77332.1); similar to putative ZR1 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87854.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Disease resistance/zinc finger/chromosome condensation-like region; (InterPro:IPR013591); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306) 0.174999637378599 1.86624171175933 0.0899434196846927 1 1.56028362189993 9.84879353015435 0.174999637378599 0.0812884948538186 AT5G04870_at 5.55066611985345 5.63342686029714 6.25587367161133 6.06184397997069 6.62674923214367 6.08598276147102 5.28395773443824 5.15431606168131 5.79905822876721 5.53104779126862 7.11000940938328 7.10632088438107 5.98606887616834 6.60573411350078 6.52280751608448 6.41575334508537 5.64492725949302 6.47177829367353 5.65621894401781 0.211134967863096 0.204894213466026 0.202941196626001 0.206913929434972 0.211858497979987 0.221857961784769 0.208772868828804 0.211418540794534 0.220409520617763 0.20605634533285 0.209720732714271 0.208743940125958 0.202452715793675 0.204489196798397 0.209064291243611 0.20123896499804 0.217741242195082 0.207203726755506 0.204958283601044 5 5 - 1417016 1418245 1417632.727 1416784 1420339 - gene protein_coding_gene TRUE TRUE AT5G04870.1 CPK1 (calcium-dependent protein kinase isoform AK1); calcium- and calmodulin-dependent protein kinase/ kinase A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. Identical to Calcium-dependent protein kinase, isoform AK1 (EC 2.7.11.1) (CDPK) (AK1) [Arabidopsis Thaliana] (GB:Q06850); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), anion channel/ calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to CPK20 (calcium-dependent protein kinase 20), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G38910.1); similar to calcium-dependent protein kinase 3 [Nicotiana tabacum] (GB:CAC82999.1); similar to calcium-dependent protein kinase 2 [Nicotiana tabacum] (GB:CAC82998.1); similar to putative calcium-dependent protein kinase 2 [Isatis tinctoria] (GB:ABE73345.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.189279708600012 -1.86504679297441 0.0901228328859298 1 1.55861523327776 11.9041186944696 -0.189279708600012 0.102924936062003 AT5G53660_at 1.63897187278973 1.88473323729140 1.80606220374149 2.38380453136534 1.86936831764399 1.92252340758903 1.82910476304741 1.96702742381333 1.81092679614985 2.29818401886472 1.90301076780875 1.65045705035670 1.83543610353479 1.83467050211806 1.89784823073274 1.96846734852781 1.72221892652719 2.06226447960304 2.17771895708657 0.207865055863791 0.215086836489107 0.221123328183811 0.214313513214128 0.218053141152584 0.21225831359219 0.209345511513201 0.218113920213489 0.216259384030930 0.209402551480589 0.217184115304770 0.208076141521329 0.207198556605833 0.220720734393635 0.208519749538682 0.213497981222680 0.213544001618765 0.206409150492080 0.218185506895709 5 5 + 21812505 21813127 21812923 21811762 21813272 + gene protein_coding_gene TRUE TRUE AT5G53660.1 AtGRF7 (GROWTH-REGULATING FACTOR 7) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower. similar to AtGRF8 (GROWTH-REGULATING FACTOR 8) [Arabidopsis thaliana] (TAIR:AT4G24150.1); similar to TPA: TPA_exp: growth-regulating factor 3 [Oryza sativa (japonica cultivar-group)] (GB:DAA05207.1); similar to B0403H10-OSIGBa0105A11.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67857.1); similar to Os04g0600900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053763.1) -0.195615987604808 -1.86468984361763 0.0901764916039888 1 1.55811694307097 3.89015276975264 -0.195615987604808 0.111621327248302 AT5G56260_at 9.5684368696614 9.72972994862453 10.5255369549033 10.5008178292473 9.98277396751345 9.90104349971706 9.35028776912636 9.40571965419569 8.92607538223979 9.2617225943122 9.57908083329128 9.48659838072034 9.5347091017965 9.41803036624342 9.1642946656581 9.55188797904797 9.5315809436709 9.59667693776241 9.07142649989652 0.136692526254358 0.136233232754106 0.141428287790693 0.138428369439585 0.138191809928232 0.136844160218602 0.133375800732366 0.140525138994319 0.156453433518899 0.132725475241591 0.141750855995525 0.137864091968225 0.136592563882843 0.145805475734641 0.139778368868992 0.135445686719300 0.148060783640310 0.144499711269070 0.138830187835496 5 5 - 22792775 22793199 22793030.364 22792551 22794530 - gene protein_coding_gene TRUE TRUE AT5G56260.1 dimethylmenaquinone methyltransferase family protein Identical to Regulator of ribonuclease-like protein 3 [Arabidopsis Thaliana] (GB:Q9FH13;GB:Q53XH2); similar to dimethylmenaquinone methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G16450.2); similar to S-adenosylmethionine:2-demethylmenaquinone methyltransferase-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84438.1); contains InterPro domain Protein of unknown function 1935; (InterPro:IPR010203); contains InterPro domain Dimethylmenaquinone methyltransferase; (InterPro:IPR005493) -0.152706543343069 -1.86465184656692 0.090182205276129 1 1.55806390295372 19.1551760915437 -0.152706543343069 0.0330072254182044 AT5G44180_at 7.65886132621482 7.85490731730397 8.36849219145124 8.39635416877462 8.49396992597722 8.41944219072026 7.14494335902365 6.62327423399943 8.03492910519457 7.6851830767909 8.52740737292933 8.37247097830085 7.90370014917896 8.22590451740408 8.12054284386878 8.36462758175925 8.45755670727223 8.1676924973791 7.96743098714442 0.137049533284931 0.133822660099202 0.135368900383125 0.135792025039542 0.133924872216692 0.134353560504813 0.15209307049249 0.152748516543509 0.149424865332908 0.1383588678102 0.131548984898489 0.134196912110108 0.135239951167987 0.133642200695474 0.141262801667767 0.131695506671217 0.143905087573399 0.132717622049699 0.133493545788212 5 5 + 17806538 17807074 17806770.636 17800399 17807238 + gene protein_coding_gene TRUE TRUE AT5G44180.1 homeobox transcription factor, putative similar to HB-1 (homeobox-1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G28420.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU10652.1); similar to Os05g0562400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056321.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain DDT; (InterPro:IPR004022) -0.185316601468859 -1.86411842886244 0.0902624512883326 1 1.55731935721334 15.9516983662106 -0.185316601468859 0.0974196900400337 AT5G57310_at 1.91647427961257 2.19480775424629 2.36156289124889 2.55652632643729 1.67278181229922 2.01341309226556 2.36797539742274 1.92223489217353 2.08237612718866 1.92494057027926 2.10539201922739 1.91881493375788 2.00783273541081 1.78911735703499 1.97536648063395 1.96558619869117 2.17456407972885 2.32780142371305 2.30895091457429 0.201378391809686 0.200889424022179 0.202960613047875 0.210774218747504 0.215648279932595 0.200622723483855 0.207242513164425 0.20935733450985 0.206827980766864 0.207465471008748 0.201792238541873 0.200622723483855 0.209569310615539 0.207777766944833 0.205989576044134 0.203697729317986 0.22343555698118 0.208433660498391 0.202117150631763 5 5|0 +|/ 23228257 23228818 23228642.4 23228256 23228846 + gene protein_coding_gene TRUE TRUE AT5G57310.1 unknown protein -0.196887853868344 -1.86328998397236 0.0903872108560179 1 1.55616320629521 4.19496302614934 -0.196887853868344 0.113505197973679 AT5G62030_at 5.22820685585883 5.00093962973603 5.55874046045115 5.62654395397826 5.87965820805986 5.69381516395844 5.37562410405016 4.74029401864984 4.54766592583491 4.31028389205176 5.35279820344817 5.33766297339489 5.64401670314818 5.53438188585492 4.9825414091843 5.59841238692341 5.54208801993877 5.09282505179623 4.63738485152661 0.167721746534208 0.163669253891160 0.169463089889998 0.165299925520192 0.167646807781039 0.170717074909085 0.162226872652846 0.163699240141592 0.178134394392741 0.179403937435920 0.161326368857069 0.162762155594146 0.16305435381438 0.161111613169312 0.167316991581806 0.159305146130992 0.169578472780474 0.164400105973036 0.169466992886734 5 5 + 24937082 24937584 24937319.182 24935705 24938102 + gene protein_coding_gene TRUE TRUE AT5G62030.1 diphthamide synthesis DPH2 family protein similar to diphthamide synthesis DPH2 family protein [Arabidopsis thaliana] (TAIR:AT3G59630.1); similar to Tuftelin-interacting protein TIP39, contains G-patch domain (ISS) [Ostreococcus tauri] (GB:CAL57495.1); similar to Os02g0815600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048504.1); contains InterPro domain Diphthamide synthesis DPH2 protein; (InterPro:IPR002728); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) -0.202941574781977 -1.86093249999628 0.090743105423216 1 1.55287447461882 10.3299956588506 -0.202941574781977 0.121684585149416 AT5G03905_at 7.63962785993571 7.80941687391657 8.9848124417664 9.02141455732975 8.91845671509579 8.1145264222098 8.08103126635627 7.79180149393096 6.86673993816531 6.87924647993755 7.37763327554884 7.45915707056941 7.3792186331593 7.24761071075386 6.96715384463177 7.43518815585282 7.64983334494492 7.41924036277955 6.76064855347881 0.177278207271352 0.185173096172055 0.178311095918157 0.187726797673291 0.177556811511066 0.184913657493263 0.174033010903552 0.174247062944850 0.200416933638966 0.182929316721449 0.184154089226197 0.174033010903552 0.174690962785539 0.177358772671013 0.179942477862783 0.174033010903552 0.181092713618624 0.182243499812327 0.19052877691869 5 5|0 +|/ 1052733 1054003 1053247.3 1052579 1054271 + gene protein_coding_gene TRUE TRUE AT5G03905.1 hesB-like domain-containing protein Identical to Iron-sulfur assembly protein IscA-like 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8LCY2;GB:Q9FFM8;GB:Q9LZB9); similar to ATCPISCA (CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN), structural molecule [Arabidopsis thaliana] (TAIR:AT1G10500.1); similar to HesB/YadR/YfhF [Medicago truncatula] (GB:ABE77855.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR000361) -0.227083150240572 -1.86028767026145 0.090840675814296 1 1.55197526057523 15.3963481614713 -0.227083150240572 0.150878043965309 AT5G26030_at 8.78670880207274 9.07701185735736 9.7951768959384 9.84165158611208 9.40488227392807 9.15683937421644 8.34405920384362 8.5079504454501 7.46331889856859 7.2444479985298 8.4679343881953 8.46063393856832 8.32688490757524 8.54494611707655 8.07326392024865 8.27820333835996 8.0625880277138 8.69724725588694 6.89171279243433 0.164139212431593 0.159156829417318 0.161801273190005 0.162601588654056 0.160270952491899 0.160803975796620 0.162432024943008 0.161691745873655 0.169445857084575 0.182714084799764 0.165717836552686 0.161044031908418 0.164891810917547 0.166457593260947 0.166239108785942 0.163762404269723 0.173042173972472 0.163935925570296 0.183578903230494 5 5|0 +|/ 9097955 9098722 9098360.333 9096463 9099188 + gene protein_coding_gene TRUE TRUE AT5G26030.1|AT5G26030.2 ferrochelatase I|ferrochelatase Identical to Ferrochelatase-1, chloroplast/mitochondrial precursor (EC 4.99.1.1) (Ferrochelatase I) (Protoheme ferro-lyase 1) (Heme synthetase 1) (HEM15) [Arabidopsis Thaliana] (GB:P42043); similar to ferrochelatase II [Arabidopsis thaliana] (TAIR:AT2G30390.1); similar to ferrochelatase [Hordeum vulgare] (GB:AAB71887.1); contains InterPro domain Ferrochelatase; (InterPro:IPR001015) 0.16918108040506 1.8598909733436 0.0909007487442405 1 1.55142213890454 16.8961797048052 0.16918108040506 0.0723570046160457 AT5G06510_at 2.24942968281674 2.65209436480216 1.70686218818401 1.99650988473718 3.31274508831157 2.78383795861262 1.56627901337822 1.64056429085829 1.35648962696106 1.02600815688259 1.46277423251299 0.981830255954899 1.51426166416900 1.93238037538737 1.27040803800972 1.11151971785672 1.83497135209682 1.12718282254888 1.0569448002982 0.221339408722513 0.228140352839049 0.222094609770765 0.217231266932804 0.226279959932976 0.225309906856918 0.218764488900554 0.219397822104562 0.219100584214274 0.221927155943340 0.223349266528944 0.219766791485711 0.222439147121665 0.220166440584603 0.223402184605838 0.224453771742963 0.217231266932804 0.221850721802377 0.225160950225634 5 5 + 1985830 1986512 1986172.364 1984992 1987045 + gene protein_coding_gene TRUE TRUE AT5G06510.1|AT5G06510.2|AT5G06510.3 CCAAT-binding transcription factor (CBF-B/NF-YA) family protein Identical to Nuclear transcription factor Y subunit A-10 (AtNF-YA-10) (NFYA10) [Arabidopsis Thaliana] (GB:Q8LFU0;GB:Q9FG19); similar to HAP2B (Heme activator protein (yeast) homolog 2B, unfertilized embryo sac 8), transcription factor [Arabidopsis thaliana] (TAIR:AT3G05690.1); similar to CCAAT-box binding factor HAP2 homolog [Daucus carota] (GB:BAD15086.1); similar to Os12g0618600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067293.1); similar to Os03g0647600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050774.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289)|Identical to Nuclear transcription factor Y subunit A-10 (AtNF-YA-10) (NFYA10) [Arabidopsis Thaliana] (GB:Q8LFU0;GB:Q9FG19); similar to HAP2B (Heme activator protein (yeast) homolog 2B, unfertilized embryo sac 8), transcription factor [Arabidopsis thaliana] (TAIR:AT3G05690.1); similar to transcription factor [Vitis riparia] (GB:AAF37266.1); similar to Os12g0618600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067293.1); similar to Os03g0647600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050774.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) 0.206308630582155 1.85945975448122 0.0909660909124973 1 1.55082094452916 3.51398876831143 0.206308630582155 0.126139601258149 AT5G62500_at 1.63487303285703 1.77904267710323 1.93271109187685 2.07065079625023 1.33288340260817 2.06513673348849 1.90193574113299 1.12411177341001 1.51535184426868 2.16411040015932 2.80345903173221 3.12368061915228 1.94027492261675 2.46372349914395 2.92651747153877 2.30580071328397 1.95812187807165 2.29828159388079 1.94170159896292 0.220971512352054 0.216870298983838 0.220002131432147 0.227029252292929 0.218538918659811 0.223566413958380 0.220148000120156 0.232508675718947 0.220405972227347 0.212049960845761 0.214515023255197 0.212049960845761 0.228060625420797 0.212049960845761 0.227774618515950 0.222487771510684 0.227789385521959 0.230160443809265 0.219769283068894 5 5|0 +|/ 25111266 25112205 25111812.3 25109867 25112470 + gene protein_coding_gene TRUE TRUE AT5G62500.1 ATEB1B (Arabidopsis thaliana Microtubule End Binding Protein EB1A); microtubule binding encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. similar to ATEB1A (Arabidopsis thaliana Microtubule End Binding Protein EB1A), microtubule binding [Arabidopsis thaliana] (TAIR:AT3G47690.1); similar to microtubule-associated protein EB1-like protein [Medicago truncatula] (GB:ABE91245.1); contains InterPro domain EB1; (InterPro:IPR004953); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 0.260691681283235 1.85895886553636 0.0910420443993203 1 1.55012269884537 3.9057700297448 0.260691681283235 0.188066499124664 AT5G42220_at 7.88470667372092 8.03249830732813 8.65918073996823 8.63530347973225 8.99359443837093 9.00274268989612 7.7055921263989 7.91249540986987 7.92092438145395 7.66062700474547 8.4452373162015 8.36219027855867 8.37620013156194 8.38255315802957 8.13371599876709 8.67394343916766 7.84041138788665 8.47562271991764 7.88499077075254 0.162973801706785 0.150646872231045 0.149810225341158 0.151960931860846 0.154030537846634 0.151966339409381 0.153133604404445 0.152178883319014 0.165295173808761 0.160409213859928 0.149810225341158 0.156274751002505 0.151531106941361 0.163176785708278 0.154744486306809 0.149810225341158 0.172812600020066 0.162305771303658 0.158161546322598 5 5 + 16893793 16894518 16894116.545 16889571 16894894 + gene protein_coding_gene TRUE TRUE AT5G42220.1 ubiquitin family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25270.1); similar to putative calreticulin interacted protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30454.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.155912037682552 -1.85894894049015 0.0910435499969697 1 1.55010886408163 16.4324717445333 -0.155912037682552 0.0442238983158304 AT5G05880_at 1.63949608005184 1.76550417645514 2.31510537501748 2.65592644407861 1.82705280707719 1.75948644663260 1.81084394663557 2.20613280589840 2.40586393368289 2.58518398559336 2.15237580406767 2.27876447685999 2.15921693436822 2.21902753616535 1.79284759821271 2.03349951579781 2.15558678696681 2.69434238892144 2.32569606760330 0.184155761065129 0.183441805423006 0.188504750725164 0.19038596517086 0.185044784860958 0.182784978078304 0.183616434023787 0.184363169278188 0.186887682882038 0.187583364434782 0.184087789567947 0.181421806268527 0.189150312649975 0.188762654442975 0.188367365208171 0.18461992128159 0.187909867555614 0.189686431301468 0.186111071933348 5 5 + 1770918 1771459 1771113.909 1769649 1771516 + gene protein_coding_gene TRUE TRUE AT5G05880.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05900.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05890.1); similar to UDP-glycosyltransferase 76G1 [Stevia rebaudiana] (GB:AAR06912.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.182207262871053 -1.85862131699179 0.0910932622966524 1 1.54965220089321 4.30975465646244 -0.182207262871053 0.0936504843091815 AT5G54470_at 5.56248111659101 6.03593709508482 6.91728990515327 6.76552232994277 7.68402377508591 7.10728798904528 7.4232731061942 7.40984743168238 5.66067810954169 5.29169139483847 6.39802524146995 6.7690517094303 7.28064332873783 7.06660187511444 5.72615641438494 6.71972128955745 6.81083312125913 6.33316798102778 5.48043037908036 0.220839707044150 0.211710179453586 0.206799554197280 0.213004022747080 0.221528125802631 0.218908485254111 0.218563840584694 0.219152638100764 0.215948632595531 0.22468741122472 0.212504673789210 0.209690719513731 0.212163526179668 0.215097662642389 0.216224120174019 0.211130166380158 0.213518878709578 0.207772582035599 0.217299028631843 5 5 - 22132046 22132426 22132268.909 22131530 22132698 - gene protein_coding_gene TRUE TRUE AT5G54470.1 zinc finger (B-box type) family protein similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G27310.1); similar to Os06g0298200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057441.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96940.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) -0.210773492776459 -1.85853405887136 0.0911065067130085 1 1.54953058106625 12.9210203842356 -0.210773492776459 0.131794320947564 AT5G08230_at 1.57350064336461 1.12668215255529 2.04027194898695 2.12372157045498 1.79878793284271 1.93406823843077 1.51994176082856 1.51874078349628 2.15050863955937 1.56448345828479 2.04907674408379 1.71608284067326 1.95696923134946 2.24746699527479 2.10282426123498 1.98679524558011 1.92416264937160 1.92863222616582 1.96443632889307 0.217754213959589 0.217155245235768 0.227279687909482 0.230704525637079 0.226456725896355 0.229207080932206 0.212370900956844 0.229022486339769 0.221511855524274 0.218103486682361 0.220905063105491 0.219237965323271 0.225701122557562 0.212370900956844 0.214711149499501 0.216190385659692 0.220708322968301 0.225515315642428 0.218317756515117 5 5|0 -|/ 2643874 2644626 2644311.3 2643539 2649789 - gene protein_coding_gene TRUE TRUE AT5G08230.1 PWWP domain-containing protein similar to HUA2 (ENHANCER OF AG-4 2) [Arabidopsis thaliana] (TAIR:AT5G23150.1); similar to PWWP; Regulation of nuclear pre-mRNA protein [Medicago truncatula] (GB:ABE89069.1); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain PWWP; (InterPro:IPR000313) 0.174617516159017 1.8570697727608 0.0913290270016386 1 1.54749006275112 3.64553642043459 0.174617516159017 0.082071127600965 AT5G19100_at 2.43555299815391 2.04251702891876 2.19740748932056 2.15381392774104 1.77319613970434 2.03600624723175 2.45455500477639 1.94430655816354 2.16198919270554 2.09617029045163 2.48120116615370 2.23843031789549 2.04522731086573 2.16748206509909 2.47656552732292 2.4779813693418 2.82244289106212 2.17236219143308 2.25507402367124 0.243239909762844 0.241980596538802 0.254073580719072 0.246638038147845 0.240849904413552 0.242661346773514 0.247667966727813 0.261090856519212 0.249301380008349 0.243259915321045 0.245071195162322 0.242199300868684 0.246724017845787 0.241375912076404 0.240849904413552 0.241950237765821 0.251907585753639 0.245146181877200 0.248382447372186 5 5 - 6408265 6408754 6408531.545 6408244 6409419 - gene protein_coding_gene TRUE TRUE AT5G19100.1 extracellular dermal glycoprotein-related / EDGP-related similar to extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] (TAIR:AT1G03220.1); similar to nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] (GB:AAX81588.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.201586875636110 -1.85614997373747 0.0914690599388611 1 1.54620868168755 4.39531414450439 -0.201586875636110 0.120618020831688 AT5G43900_at 8.2944900890062 8.13729053718402 9.03727043789942 8.83521863546656 9.2876473892262 8.40675672653266 7.84100877996043 7.65782511504277 7.60389793003605 6.99209473918422 8.84921101510538 8.64157838963926 8.92259275293837 8.74040817818558 8.37551723551832 8.65552678546964 8.5280332426357 8.52360890790007 7.38060168341533 0.180538620322836 0.170215287964689 0.175098069372855 0.166738633137847 0.175747290589357 0.176135024454152 0.173075005662437 0.174749836272704 0.186903196858228 0.168397016688087 0.166016189616104 0.166531611363426 0.164867151664084 0.175720261584150 0.175719760252281 0.166609046796285 0.177257168422349 0.177354911731006 0.175668224371621 5 5|0 -|/ 17674752 17675813 17675223.143 17674144 17684053 - gene protein_coding_gene TRUE TRUE AT5G43900.1 MYA2 (ARABIDOPSIS MYOSIN) Encodes a member of the type XI myosin gene family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. similar to XIG (Myosin-like protein XIG), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT2G20290.1); similar to XIC (Myosin-like protein XIC), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT1G08730.1); similar to XIB (Myosin-like protein XIB) [Arabidopsis thaliana] (TAIR:AT1G04160.1); similar to myosin subfamily XI heavy chain [Petroselinum crispum] (GB:AAK21311.1); similar to unconventional myosin [Helianthus annuus] (GB:AAB71528.1); similar to IQ calmodulin-binding re (GB:ABE82655.1); contains InterPro domain Dilute; (InterPro:IPR002710); contains InterPro domain Myosin, N-terminal, SH3-like; (InterPro:IPR004009); contains InterPro domain Myosin head, motor region; (InterPro:IPR001609); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) 0.236252118194275 1.85605464636166 0.0914835841550745 1 1.54607589702454 16.4272339709411 0.236252118194275 0.161883480422465 AT5G11570_at 0.334023934829449 0.825998318324763 0.981510952412518 1.17085070564411 0.905307136718754 0.603297751626435 0.654825026070959 0.705016180115554 0.952304712583937 0.89485612439144 1.04064109825489 0.97690768445022 1.05136651929184 0.911855166072669 0.830693585022937 0.735988916077326 0.701640639791868 1.11581972098796 0.292517378350806 0.205537777722221 0.213135759754013 0.20321476043151 0.210649669231887 0.204221716489985 0.204560253776074 0.212439832342043 0.206816917674642 0.215168082818143 0.209804156516246 0.223609131288518 0.203424956774349 0.229738603370885 0.210555290022851 0.20534575166589 0.211085531996526 0.211519216579692 0.221898247964418 0.210853617450917 5 5 - 3716014 3716621 3716339.455 3715944 3718277 - gene protein_coding_gene TRUE TRUE AT5G11570.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT2G02020.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABD32300.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.190187709407376 1.85584033277077 0.0915162450306842 1 1.5457773840719 1.58952386972737 0.190187709407376 0.105494832307924 AT5G65040_at 2.31078170818767 2.34827199272017 2.46179861288657 3.05659785912033 2.42551340992456 2.69747085602135 2.03998003407592 2.36287077553366 2.62301440418474 2.65836023128514 2.45309422844169 2.38082057528318 2.32289257869563 2.28147000975387 2.44822796443633 2.48426797589103 2.35403084685336 2.81123180160809 2.7715475833725 0.217142310633754 0.214779973451776 0.220818725456020 0.215849375705825 0.224352185248442 0.224249640636546 0.214779973451776 0.215404402249307 0.222304383482184 0.217269810110324 0.216690115681325 0.223672186935895 0.218774731486828 0.216411642032739 0.214779973451776 0.215212728251116 0.216119340024688 0.228395199624553 0.222531481998627 5 5 - 25995110 25995542 25995379.273 25994847 25995643 - gene protein_coding_gene TRUE TRUE AT5G65040.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G22160.1); similar to 80C09_23 [Brassica rapa subsp. pekinensis] (GB:AAZ41834.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) -0.205872393094456 -1.85372570590291 0.0918390846978248 1 1.54283282261439 5.02606660800937 -0.205872393094456 0.126390453059632 AT5G02940_at 8.95162680823661 9.05943316653792 9.8603925606099 9.66866260761141 10.2128325803751 9.58639759384005 9.6818993641094 9.21319997989542 8.22404218278155 9.31665042741392 10.1506452737106 10.1278170736251 10.0847730440290 10.2549211339747 10.1750953714726 10.4563451337543 10.0824232525704 10.0585066510892 9.22282059093604 0.112374342108586 0.102962144785275 0.107398074543866 0.104361879636208 0.106835231884987 0.107659294644247 0.112956340783255 0.111630502983650 0.139224149300711 0.107301033091611 0.105124987627588 0.107623030358238 0.106322207962571 0.102208730573169 0.110147161894930 0.104926760675845 0.111769387621437 0.107292611817335 0.112150201715306 5 5|0 -|/ 684730 685700 685334.5 684472 689696 - gene protein_coding_gene TRUE TRUE AT5G02940.1 similar to phosphotransferase-related [Arabidopsis thaliana] (TAIR:AT5G43745.1); similar to Os03g0163100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049055.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAN06856.1); contains InterPro domain Protein of unknown function DUF1012; (InterPro:IPR010420) 0.217024960493689 1.84927027579171 0.0925227254667208 1 1.53663387185666 19.0767990495630 0.217024960493689 0.140641653135935 AT5G27830_at 8.81751423774783 9.06086759207793 9.71949047698142 9.65384197090343 9.38155134391055 8.9976328832641 7.80440101948086 7.30872328569274 7.30307694816982 6.4784211539693 7.73006488644455 7.83212951463103 7.83639274750403 8.11536178731024 7.99208852666283 8.0376261106803 7.5460523296063 7.88721522126938 6.81733557295996 0.182065358794348 0.181757039749073 0.180543057956162 0.181906133401169 0.185618069258510 0.182752283854930 0.184923833721728 0.180438232870769 0.196579204560179 0.204220293860441 0.190519403990083 0.186709936971469 0.184276851941726 0.189728381825751 0.180994204244258 0.180438232870769 0.189176620726207 0.180806490718094 0.189225739584029 5 5|0 +|/ 9861985 9862695 9862296.9 9861293 9862900 + gene protein_coding_gene TRUE TRUE AT5G27830.1|AT5G27830.2|AT5G27830.3 similar to hypothetical protein MtrDRAFT_AC136288g4v1 [Medicago truncatula] (GB:ABE80618.1); contains InterPro domain Folate receptor; (InterPro:IPR004269)|similar to hypothetical protein MtrDRAFT_AC136288g4v1 [Medicago truncatula] (GB:ABE80618.1); contains domain Frizzled cystein-rich domain (SSF63501) 0.197965357978579 1.84888031699480 0.0925827828285322 1 1.53609164371586 16.212199992364 0.197965357978579 0.116939425074827 AT5G67350_at 3.60392477329683 3.96034242128763 4.46817094710285 4.79967100919817 4.27597708563717 4.82674146637792 4.40880282427702 4.58324938582671 3.97618942329913 4.29151885880885 5.33928585127321 4.99219042766357 4.95180289688611 4.62376485858101 4.75761152761417 5.47732529846534 5.00747769895015 4.66157093894098 4.23075193334798 0.218882915000270 0.227637011705942 0.222694450761921 0.218722313354767 0.212946362278653 0.224552898532838 0.217324842009356 0.230171479738641 0.225981538024616 0.225364438457128 0.221365525232289 0.216997941956033 0.215716831955972 0.213194445599183 0.212753885664329 0.222922576184844 0.240075749383308 0.222472170699785 0.217152703247730 5 5 - 26885767 26886321 26886099.455 26885516 26886712 - gene protein_coding_gene TRUE TRUE AT5G67350.1 similar to hypothetical protein MtrDRAFT_AC144765g16v1 [Medicago truncatula] (GB:ABE87032.1) -0.208805483800021 -1.84876339445467 0.0926007969927055 1 1.53592907620298 8.93712603534994 -0.208805483800021 0.130733473942895 AT5G49750_at 0.505216877510015 0.514926020936954 0.426060987654686 0.701664407306389 0.0254239053566785 0.0495805463839944 0.236499509661986 0.37981500055792 0.698800133410808 0.411452630915507 0.233782800528534 0.00561676671133321 0.226645094305331 0.393100371902451 0.548561379407508 0.0116256114263243 0.134534655346911 0.325244121343958 -0.0601677589969592 0.201276772657433 0.203092629243101 0.204567617802687 0.206616813699569 0.2061937753419 0.202859329676605 0.207640620618571 0.204447735772442 0.207557281975118 0.213478262038444 0.203122230038374 0.209996940168776 0.205749468563624 0.205963452924767 0.203636757809341 0.202273555134302 0.201897006350532 0.207614829236781 0.206950346393323 5 0|5 /|+ 20229617 20230934 20230368.875 20228104 20230960 + gene protein_coding_gene TRUE TRUE AT5G49750.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93732.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.15893685967989 -1.84820729004049 0.092686519672972 1 1.53515594194838 0.647356999536742 -0.15893685967989 0.0539459952440388 AT5G40250_at 4.75584640819769 4.96960873425199 6.72628828005021 6.64987356986324 6.70436217491273 6.92254966667329 5.55001064169248 5.75928045286668 5.1706062336071 5.60137633186911 6.17190295058491 6.43117827732735 6.37821332314459 6.46063326711943 6.23386308315015 6.64390638957161 6.34781218313735 6.24102428222649 5.65027950285522 0.202230741742504 0.198156339223327 0.199809760657544 0.199793766892863 0.195596057123078 0.210898022759868 0.200140453468733 0.215124104623738 0.202346001504325 0.206493202526728 0.202746951590045 0.199639181192672 0.196444696056486 0.199544472554005 0.198912734021808 0.198205236036265 0.211385048686253 0.19963994991454 0.200798036218413 5 5 + 16103847 16104352 16104116.636 16102992 16104769 + gene protein_coding_gene TRUE TRUE AT5G40250.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5I (ATL5I) [Arabidopsis Thaliana] (GB:Q9FL07); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G23980.1); similar to RING finger 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD36516.1); similar to Os02g0743100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048093.1); similar to Os06g0233200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057231.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.164306392159093 1.84704587204384 0.0928657858209233 1 1.53354161032828 11.9235545288851 0.164306392159093 0.0654259186092455 AT5G09230_at 6.37218641293478 6.12191558535499 7.30689889884572 7.23630735207047 7.41999346764424 7.25817452031117 7.47728367596898 7.08266703462665 5.6499968144751 6.5777807152656 7.77696795669221 7.329479209693 7.49697014815079 7.42748520562652 7.43821854457576 7.34143355428062 7.56264143028252 7.13493589540777 6.55875224760092 0.181483910330319 0.175351751379350 0.170522112331066 0.179152994743629 0.170522112331066 0.179804942419646 0.177880313792312 0.170522112331066 0.187225370961667 0.17877014263414 0.17521485714473 0.170522112331066 0.172107963022528 0.180133915384720 0.176916747031573 0.17230448609332 0.177816884258570 0.178223295020737 0.177601071474463 5 0|5 /|+ 2872714 2873575 2873159.8 2871378 2873790 + gene protein_coding_gene TRUE TRUE AT5G09230.1|AT5G09230.2|AT5G09230.3|AT5G09230.4|AT5G09230.5|AT5G09230.6|AT5G09230.7 SRT2; DNA binding|SRT2 similar to SRT1 (SIRTUIN 1), DNA binding [Arabidopsis thaliana] (TAIR:AT5G55760.1); similar to Silent information regulator protein Sir2 [Medicago truncatula] (GB:ABE79263.1); contains InterPro domain Silent information regulator protein Sir2; (InterPro:IPR003000) -0.176246829348528 -1.84553930521851 0.0930988007769504 1 1.53144824141637 13.8847749112376 -0.176246829348528 0.0864453203254562 AT5G10020_at 3.42993457346955 3.33810368767241 3.08533557045438 3.57113595468288 3.55034434718160 3.45302390495201 3.34743830559327 3.30282619712087 3.31744023020506 3.09562190219827 5.81428472466554 5.91320503944403 4.57700194339441 4.74347393434291 5.56729733261419 4.69149748954703 3.69579465096055 3.99206979548046 3.3184094213815 0.255665895866409 0.251473881124502 0.251473881124502 0.252980774349081 0.251473881124502 0.262435871774656 0.2580716823918 0.253777131969949 0.258967036987764 0.258897706587473 0.259071718704333 0.27656743996544 0.253111136831943 0.259083429294822 0.268460902308567 0.251866604151300 0.258578793949206 0.259217028177132 0.259122486018766 5 0|5 /|+ 3136374 3136924 3136604 3133262 3137243 + gene protein_coding_gene TRUE TRUE AT5G10020.1|AT5G10020.2 leucine-rich repeat transmembrane protein kinase, putative similar to ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G27060.1); similar to 52O08_19 [Brassica rapa subsp. pekinensis] (GB:AAZ67565.1); similar to 117M18_5 [Brassica rapa] (GB:AAZ66924.1); similar to 80A08_1 [Brassica rapa subsp. pekinensis] (GB:AAZ67586.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.176707182029501 1.84308675936053 0.0934792759072847 1 1.52804215184548 7.44384380017475 0.176707182029501 0.0875417904133732 AT5G19930_at 8.12772254859962 8.30635279062276 8.96990679847334 9.10209675753621 8.81799079371917 8.84414539287742 6.8745825692778 7.43218677418107 7.58250330962933 5.91048083389444 7.76544803156566 7.75069255213755 7.50859311203792 7.74546836806793 7.25607621489863 7.87136034384907 7.4586566469769 7.90199209440685 6.3707114727181 0.215597324157195 0.210946263325189 0.225213751458719 0.215944600216670 0.213832428524968 0.22367702089541 0.220172106672971 0.222917829565294 0.220634672098687 0.217997869931646 0.210946263325189 0.2153193264956 0.215356543731825 0.213459959158313 0.223175222717623 0.210946263325189 0.220958845963635 0.215316898032693 0.21522028741154 5 5 - 6737881 6738488 6738206.636 6737580 6739350 - gene protein_coding_gene TRUE TRUE AT5G19930.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G78620.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67826.1); similar to Os01g0178200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042190.1); similar to Os01g0507300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043151.1); contains InterPro domain Protein of unknown function DUF92, transmembrane; (InterPro:IPR002794) 0.187790304958615 1.84303460365035 0.0934873825580882 1 1.52796974121824 15.4486319494475 0.187790304958615 0.103975392744285 AT5G61000_at 2.46619090447081 2.31002346754247 3.64030620416432 3.90420297841031 2.21412934962883 2.09055735210206 2.93819245749405 2.80733172587069 2.67868904394271 3.24254060360805 3.93669940165843 4.55789281558242 3.0180657551796 3.83000149898248 4.78907909543055 3.08536993805553 3.46834912967296 3.49109723511754 2.70115063479002 0.235494664798656 0.226543556335733 0.226089001150198 0.225892074027862 0.226110790501026 0.233915011798147 0.223339760528437 0.232305946747124 0.223228923816009 0.226291013030808 0.242161602821507 0.247018410750211 0.226719608768785 0.235394869785216 0.239075288649068 0.233099254355661 0.225324470377636 0.235359456817079 0.232142509430522 5 5 - 24566930 24567742 24567333.545 24566804 24569947 - gene protein_coding_gene TRUE TRUE AT5G61000.1 replication protein, putative similar to replication protein, putative [Arabidopsis thaliana] (TAIR:AT5G08020.1); similar to Os03g0214100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049369.1); similar to replication protein A1 [Oryza sativa] (GB:AAB71836.1); similar to replication protein A 70b [Oryza sativa (japonica cultivar-group)] (GB:BAC77529.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Replication factor-a protein 1 Rpa1; (InterPro:IPR004591); contains InterPro domain Transaldolase; (InterPro:IPR001585); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Replication factor-A protein 1, N-terminal; (InterPro:IPR007199); contains InterPro domain nucleic acid binding, OB-fold, tRNA/helicase-type; (InterPro:IPR004365) 0.16193788190462 1.84230741929129 0.0936004773368239 1 1.52696025168586 6.11946486470554 0.16193788190462 0.0615316647159194 AT5G11160_at 2.18497119333776 2.57191626549616 2.98425705687426 3.13429443530612 1.9645184295704 2.70554931192798 2.76461876046322 2.63754826059809 3.16933565939326 2.41775926337433 3.72442008640675 2.73966289093391 2.66270215285961 3.14099188978415 2.98565768910431 2.72584071886117 2.59806712559764 3.03046933629752 2.95307278434531 0.228772729908193 0.229885457411062 0.233492735398759 0.228411622115098 0.230346753395208 0.233339920249239 0.239787653731234 0.236055007958356 0.234115950258355 0.228782323842445 0.232483855106312 0.23136853429688 0.231838245833865 0.24613743421565 0.229579938462372 0.232345455157357 0.241323161143385 0.228411622115098 0.230026430511214 5 5|0 +|/ 3550825 3551934 3551457 3550521 3552208 + gene protein_coding_gene TRUE TRUE AT5G11160.1 APT5 (ADENINE PHOSPHORIBOSYLTRANSFERASE 5); adenine phosphoribosyltransferase similar to APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2), adenine phosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT1G80050.1); similar to adenine phosphoribosyltransferase [Physcomitrella patens] (GB:AAZ42360.1); similar to Os07g0484800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059653.1); similar to adenine phosphoribosyltransferase [Ceratodon purpureus] (GB:ABB69070.1); contains InterPro domain Adenine phosphoribosyl transferase; (InterPro:IPR005764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836); contains InterPro domain Purine/pyrimidine phosphoribosyl transferase; (InterPro:IPR002375) -0.22245448020705 -1.83823009296287 0.0942369305144515 1 1.52130351336214 5.51730874183088 -0.22245448020705 0.148616720051521 AT5G48020_at 8.16716637240483 8.1200570551064 8.85187421526112 9.03829175679092 8.94196221928176 8.69476801193778 8.26039737375147 8.3320306330796 6.9599423875924 7.68409129548772 8.94622878057893 8.87535408669726 8.87253728979551 8.89825654538565 8.78878145355048 8.84887132636757 8.67845300357677 8.66719199562297 7.6755086710662 0.158499761091740 0.158324940573881 0.169052921199909 0.159740375104492 0.165508100413924 0.168546149796195 0.17165054419572 0.162160263018257 0.174944975653056 0.164085512789970 0.163958058931066 0.157780997154105 0.158933941712622 0.159254230803868 0.158234048435428 0.158913524062146 0.16229236074803 0.163211796059951 0.162963858711660 5 0|5 /|- 19480133 19480774 19480369.875 19479884 19482183 - gene protein_coding_gene TRUE TRUE AT5G48020.1 similar to hypothetical protein DDBDRAFT_0189346 [Dictyostelium discoideum AX4] (GB:XP_647101.1); similar to Os02g0717500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047933.1); contains domain no description (G3D.3.50.60.10); contains domain Clavaminate synthase-like (SSF51197); contains domain FE(II)/ ASCORBATE OXIDASE SUPERFAMILY (PTHR10209) 0.158792890700119 1.83806474030442 0.094262824977069 1 1.52107423361636 16.6817218354912 0.158792890700119 0.0555952988789384 AT5G12990_at 1.4072366746003 1.85010453028727 1.86990963671228 2.27054213583799 1.65071312195498 1.83673868258006 1.82935310490916 1.94006881181707 2.33205620096455 2.16719770467927 1.76877558330772 2.14081338920574 2.04734773314206 2.07178806422009 2.12866677530416 2.04417333761875 1.81746675540744 1.64860453931121 2.01242057067896 0.200995004288068 0.197842634113606 0.201491634452971 0.201533314743326 0.198935921190163 0.199512604178525 0.204292008653269 0.19453547401187 0.200477704741997 0.198380365988183 0.203571934071792 0.198178196923455 0.196466186439111 0.200627723982896 0.200346557044434 0.195466358044263 0.195884931642491 0.217648295778133 0.199104874687627 5 5 - 4109237 4109747 4109454.727 4109237 4109771 - gene protein_coding_gene TRUE TRUE AT5G12990.1 CLE40 (CLAVATA3/ESR-RELATED 40); receptor binding Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. -0.191569482312145 -1.83800261553176 0.0942725554927418 1 1.52098809326536 3.89633967781934 -0.191569482312145 0.109927424685925 AT5G56070_at 0.784462944828842 0.437095712638769 0.632018559994685 0.387984783632578 0.811637754057933 0.592375164845208 1.07196059400575 0.767015144389809 0.897687177550874 1.32560137415438 0.79285291377049 1.00413056594207 1.09989664559508 0.755763409574387 0.710984860781771 0.74896013960016 0.848717281902039 1.44367061538587 0.829025238352434 0.213411406204831 0.221430364107174 0.215565156235602 0.211733310392698 0.211054944405638 0.217942044992415 0.215395345127102 0.21928972007554 0.221256769131404 0.211054944405638 0.217187137012599 0.21282140088504 0.215690191732863 0.217600508462928 0.222005044818166 0.211054944405638 0.225832714371218 0.218256829063431 0.211072447038119 5 5 + 22725909 22726351 22726058.727 22725905 22726430 + gene protein_coding_gene TRUE TRUE AT5G56070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56050.1) -0.182991626845100 -1.83612958001941 0.0945663595992308 1 1.51839164416291 1.65709882434330 -0.182991626845100 0.09809074926597 AT5G01060_at 1.18771627005023 0.79764077670191 1.29948666450777 1.15042985028825 1.24123224836078 1.31351320258901 0.613155213714427 0.955292594361014 0.860046768508616 0.997568534401186 1.12786495292728 1.05438116678936 1.13611727319008 1.19876513249572 0.629335434328749 1.14562871467052 1.13819523879084 1.37979837669477 1.03844698267393 0.183753828865943 0.178579245001592 0.191101349823868 0.186969668691991 0.185405495938137 0.18714518243695 0.185124772864931 0.178579245001592 0.186322689083645 0.189056754178331 0.183609978147481 0.188231935304843 0.183118085818751 0.196782814193815 0.186029466076504 0.187773410388079 0.192745978746678 0.187738022683836 0.189198687936789 5 5|0 +|/ 24009 24818 24486.3 22739 24846 + gene protein_coding_gene TRUE TRUE AT5G01060.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G09240.1); similar to TPR-containing protein kinase [Glycine max] (GB:AAX61123.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.180396364130034 1.83604003236665 0.0945804270538706 1 1.51826754228972 2.10311579328692 0.180396364130034 0.0942567208796052 AT5G61790_at 10.6641443684750 10.7231296166991 11.6193296845846 11.6877154940324 10.6599561374730 10.5411834461735 9.32581215835431 9.45791825096608 9.06449902023345 9.0395510762468 9.35910648420972 10.0628255892537 9.72620248059792 9.43593113870307 9.83801534146666 9.4559252850495 9.26106753030342 9.59417982868915 8.99548798967695 0.0985543259147781 0.0988199293564131 0.102100819068835 0.102115671570701 0.0985543259147781 0.101234305420133 0.100729885047826 0.0985543259147781 0.109643942916060 0.105167660046459 0.103823073478870 0.0985543259147781 0.0985543259147781 0.0985543259147781 0.0985543259147781 0.0986794791575692 0.104913342509011 0.0985543259147781 0.111008018653242 5 5|0 -|/ 24844634 24845454 24845146.4 24844328 24847017 - gene protein_coding_gene TRUE TRUE AT5G61790.1 calnexin 1 (CNX1) Identical to Calnexin homolog 1 precursor (CNX1) [Arabidopsis Thaliana] (GB:P29402); similar to calnexin, putative [Arabidopsis thaliana] (TAIR:AT5G07340.1); similar to calnexin homolog (GB:AAA17742.1); similar to Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE80216.1); similar to putative papillar cell-specific calnexin [Brassica napus] (GB:AAK84429.1); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580) 0.150701675578172 1.83501181325849 0.0947420923893938 1 1.51684276412973 19.8973166805130 0.150701675578172 0.0344873459196032 AT5G02740_at 5.91736882840648 6.71604472651681 7.49489150172582 7.76057287644039 7.89398994470949 7.34395511594263 6.65996713402805 6.62842290480521 5.36648869623195 5.74168337276804 6.7769506948101 6.99607783223122 6.81962435864498 6.9669995125998 7.35068618350533 6.82960473578662 6.74308546358511 6.82223042955811 5.32152234172661 0.251397196993687 0.233471927007781 0.240208966799587 0.247575202397563 0.236134153025425 0.237531025807258 0.238553528255285 0.238437699155136 0.269634188239648 0.236925826931017 0.233471927007781 0.233471927007781 0.233471927007781 0.239180703161281 0.234155021738588 0.233471927007781 0.275470329373002 0.244346783094530 0.251611310339912 5 5|0 +|/ 616608 618223 617449 616432 618616 + gene protein_coding_gene TRUE TRUE AT5G02740.1|AT5G02740.2 nucleotide binding| similar to unknown [Helianthus annuus] (GB:AAR23805.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)|similar to unknown [Helianthus annuus] (GB:AAR23805.1) 0.244488444811598 1.83497136687956 0.0947484568914278 1 1.51678672628999 13.2467627315297 0.244488444811598 0.174090164954290 AT5G01550_at 3.9056587740084 4.18931401847746 6.01304517635589 5.59201713480307 4.91742941343073 4.82292297188775 3.19782387915125 3.23395223008746 3.44734107103295 3.30896042090868 3.56610083427651 3.1583251440799 3.63743721216082 3.19451855347306 3.24307418843394 3.09273379966858 3.98657229635329 3.52001868486834 3.21757405318186 0.224497667493583 0.216555604041172 0.228473236973897 0.227559902355782 0.224175219307660 0.217552291532663 0.210076316377659 0.219922851172325 0.213693782902318 0.216641855174789 0.217233983832634 0.221475937426795 0.215002997232300 0.211604579019661 0.211827867745333 0.214999456974489 0.210645776501341 0.213256814713697 0.212982089865229 5 5 - 214533 215010 214792.909 214516 216582 - gene protein_coding_gene TRUE TRUE AT5G01550.1 lectin protein kinase, putative similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01560.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G08870.1); similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G01540.1); similar to receptor lectin protein kinase-like [Cucumis melo] (GB:AAU04770.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.177225389027429 1.83490850846111 0.0947583488527589 1 1.51669963807272 7.85875683521132 0.177225389027429 0.089581765480208 AT5G46390_at 8.38339753273423 8.04335505698138 8.98391338571595 8.77016047915628 9.1458438041798 8.83361467994398 8.68246444875066 8.55142661822086 8.363015148586 8.03609585682928 9.04942904667724 8.83098065163011 8.96034534944105 9.10066880738054 9.06285922568954 9.1423247280347 8.95950264186198 8.89396833660247 8.28764640945523 0.130127706424641 0.133535720483674 0.134196132908752 0.137568282786515 0.131413045341805 0.136498809026827 0.132916995833150 0.134525208836798 0.142596819901199 0.145646327565180 0.130762011903736 0.129578401504595 0.129430715070108 0.132778726877894 0.132557536238149 0.139525572451512 0.130063998765245 0.128667802733393 0.137295653891121 5 5|0 +|/ 18835111 18835945 18835526.333 18833831 18836574 + gene protein_coding_gene TRUE TRUE AT5G46390.1|AT5G46390.2 peptidase S41 family protein similar to peptidase S41 family protein [Arabidopsis thaliana] (TAIR:AT3G57680.1); similar to Peptidase S41 [Medicago truncatula] (GB:ABE79831.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S41; (InterPro:IPR005151)|similar to peptidase S41 family protein [Arabidopsis thaliana] (TAIR:AT3G57680.1); similar to D1 protease-like protein precursor [Nicotiana plumba (GB:AAL99045.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S41; (InterPro:IPR005151); contains InterPro domain Peptidase S41A, C-terminal protease; (InterPro:IPR004447) -0.177863346029388 -1.83262153352204 0.0951188924761256 1 1.51353207292667 17.2887364940628 -0.177863346029388 0.0909117158240413 AT5G19950_at 2.75659054408888 3.16455017171069 4.06899318084574 3.34671998917756 3.62786892079614 3.16750426260727 2.16198974240912 2.58720016260549 3.05450094839693 2.32939911573076 3.45068174630461 3.22806376989921 3.53344754756988 3.46717032070706 3.26206199989186 3.49210754442013 3.05487270937371 2.94389279429415 2.94075226674138 0.206245065847390 0.199546428588506 0.209310527662882 0.202350771632702 0.203135623474986 0.209397925702051 0.202862141635327 0.210318249636456 0.211033949350505 0.213271944334384 0.203242830414633 0.199546428588506 0.199546428588506 0.206553377072560 0.210179363140267 0.202270099860020 0.217210235195112 0.209480202664230 0.206678931378593 5 5|0 -|/ 6741281 6742018 6741668.4 6740779 6743775 - gene protein_coding_gene TRUE TRUE AT5G19950.1|AT5G19950.2|AT5G19950.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G63540.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72080.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67825.1); contains domain FAMILY NOT NAMED (PTHR13681); contains domain gb def: Hypothetical protein At5g19950 (PTHR13681:SF2)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72080.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67825.1); contains domain FAMILY NOT NAMED (PTHR13681); contains domain gb def: Hypothetical protein At5g19950 (PTHR13681:SF2) 0.249434899903096 1.83230354423993 0.0951691232749875 1 1.51309179155078 6.14963782895374 0.249434899903096 0.179914368541379 AT5G17910_at 5.81621459842178 6.07588636129115 6.78692954663696 7.0614552653017 7.39622036044809 6.5865592542182 5.46317518579203 6.03637258636473 6.54943536464359 5.87857406344843 7.84407530932188 7.9188527900921 7.64723601309624 7.65098186279186 7.31369212603881 7.61155115595297 7.07723696421016 7.64944354137243 5.8807288005918 0.189646351589216 0.192682730533927 0.204542876353401 0.197034176614252 0.201999825085523 0.201057305109186 0.189870431166004 0.192584402196394 0.190880898216842 0.199217517828055 0.192201409749231 0.189748840713372 0.189030452030247 0.202049135863638 0.191984227239736 0.191396133229207 0.196870328041589 0.194112600057024 0.193622288708328 5 5 + 5931711 5932217 5931941.455 5927404 5932724 + gene protein_coding_gene TRUE TRUE AT5G17910.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29620.1); similar to hypothetical protein [Glycine max] (GB:BAB41198.1) 0.252807470281739 1.83149327708477 0.0952972261364346 1 1.51197007638660 13.2488748764364 0.252807470281739 0.183707136854814 AT5G12220_at 2.98980453681947 3.50999166616100 3.80546003155953 3.90623728862409 3.89812617516455 3.94644214052573 3.09801306732325 2.8471846428022 2.19683575179789 2.42321192355739 3.14629917673909 3.0169294060249 2.53179871143193 2.78515742506067 3.13545954291325 2.89039646875291 3.24173167942911 2.41007294205057 2.54820841094193 0.242952833649560 0.243409584180307 0.244323028200853 0.241133622530287 0.237108222655899 0.242794467268696 0.240816093739225 0.240745882381174 0.239013259357735 0.237910139121484 0.237422126115524 0.237084166297325 0.244221639926195 0.243389028611970 0.240944540324105 0.238469702282563 0.246505386462736 0.243923031823711 0.236500519511741 5 5 + 3952422 3952982 3952620.909 3950156 3953086 + gene protein_coding_gene TRUE TRUE AT5G12220.1 las1-like family protein similar to Las1-like [Medicago truncatula] (GB:ABE77696.1); contains InterPro domain Las1-like; (InterPro:IPR007174) 0.184994754408646 1.83062147969864 0.0954352334496743 1 1.51076344341021 6.14223212586383 0.184994754408646 0.101793812428364 AT5G15290_at 0.394682093091937 0.306145673857102 0.52045507231992 0.630936727903969 0.848348054078144 0.367311775256358 0.372146380671570 0.0683567143921684 0.48922637685771 0.900986646209763 0.93226016970793 0.91931455816512 1.08863878119794 0.824519270476311 0.947930992561835 1.12834785513310 0.184096184034701 0.152642770777665 0.443261564843575 0.189512732510124 0.192294563875409 0.191774012379148 0.191587347961930 0.189140148308338 0.190472755856186 0.200703545575764 0.190592785589138 0.205628298390831 0.200104768716709 0.195987484691996 0.19065245047145 0.191249743514395 0.192887971204639 0.192175704734253 0.189731246173531 0.197354981438659 0.205383618567550 0.195775379420367 5 5 + 4967168 4967774 4967469.455 4967014 4968038 + gene protein_coding_gene TRUE TRUE AT5G15290.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G14160.1); similar to Protein of unknown function DUF588 [Medicago truncatula] (GB:ABE79453.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 0.184401689940293 1.82705429384752 0.0960018368468199 1 1.50582903901753 1.13023632080998 0.184401689940293 0.10145918464657 AT5G63440_at 4.92246584016943 4.83261624812335 5.16485579646465 5.13349382274725 6.3346092162007 5.48885236582434 4.96441601252645 5.08014426925697 4.74528538237719 4.25232984285969 5.40276243068407 5.60355332964772 5.48926814314878 5.56849020013093 5.37742137778417 5.42084838602404 5.67972599613435 5.22908132439087 4.81405780450502 0.222474351941484 0.211818314900496 0.220315599526493 0.215254665689739 0.219497628070554 0.223879866702398 0.215868112546895 0.217409107201529 0.213805747703899 0.2258688994651 0.211818314900496 0.211818314900496 0.215425200920068 0.225259137987208 0.216686979734252 0.211818314900496 0.214923863648866 0.223477972293302 0.218663373159881 5 5|0 +|/ 25423605 25424913 25424375.556 25423528 25425649 + gene protein_coding_gene TRUE TRUE AT5G63440.1|AT5G63440.2|AT5G63440.3 similar to Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS) [Ostreococcus tauri] (GB:CAL57463.1); similar to Os07g0295200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059406.1); contains InterPro domain Protein of unknown function DUF167; (InterPro:IPR003746)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49170.1); similar to Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS) [Ostreococcus tauri] (GB:CAL57463.1); similar to Os07g0295200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059406.1); contains InterPro domain Protein of unknown function DUF167; (InterPro:IPR003746) -0.221104808604853 -1.82690575572305 0.0960254970124802 1 1.50562366918762 10.2778241506177 -0.221104808604853 0.148641183258554 AT5G40650_at 8.43874768929464 8.6068654731997 9.22216089468412 9.15351481361854 9.01995849790894 8.6232465351762 8.42586887342538 8.29175173486828 7.16066182075979 7.62073371008054 8.2750463957372 8.54828696845742 8.14806872792171 8.29540972834375 8.42258006614238 7.90052287882022 8.28011495830108 8.33231638193986 7.52966346729024 0.141029854254445 0.137469720107471 0.138068034320189 0.147399319171859 0.140025445001562 0.141863227367103 0.137349816533853 0.137344323013093 0.148904597570549 0.146970682548920 0.146732162328065 0.138080351425575 0.134444715364274 0.139202673731478 0.139798944644374 0.133613293361477 0.145581982872988 0.145165045897432 0.143503414283292 5 5 + 16298956 16300488 16299603.545 16298632 16300755 + gene protein_coding_gene TRUE TRUE AT5G40650.1 SDH2-2 (succinate dehydrogenase 2-2) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. Identical to Succinate dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor (EC 1.3.5.1) (IP) (SDH2-2) [Arabidopsis Thaliana] (GB:Q8LB02;GB:Q9FM32;GB:Q9G3L9); similar to SDH2-1 (succinate dehydrogenase 2-1) [Arabidopsis thaliana] (TAIR:AT3G27380.1); similar to Os08g0120000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060876.1); similar to succinate dehydrogenase [Triticum aestivum] (GB:CAD62367.1); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain 4Fe-4S ferredoxin, iron-sulfur binding; (InterPro:IPR001450); contains InterPro domain 2Fe-2S ferredoxin, iron-sulfur binding site; (InterPro:IPR006058); contains InterPro domain Fumarate reductase, C-terminal; (InterPro:IPR012285); contains InterPro domain Succinate dehydrogenase/fumarate reductase iron-sulfur protein; (InterPro:IPR004489); contains InterPro domain Ferredoxin; (InterPro:IPR001041) -0.169820804484317 -1.82552644656511 0.0962454580694264 1 1.50371700746318 16.5789207786477 -0.169820804484317 0.0789902438648715 AT5G53130_at 8.6157656885295 8.83553475880847 9.76469606647998 9.82260131019465 9.64132672675906 9.70813282941725 9.20473714159093 9.09714440777675 8.95883155478885 8.86387471102807 9.26526623268606 9.12435223101859 9.08150427648003 9.22682106039337 8.95653387586474 9.15804804615638 9.24741392365352 9.2136238952964 8.4273361144273 0.123077041384027 0.121793345822773 0.129324333402763 0.124370387751800 0.126714999203791 0.127599138045742 0.123624040391818 0.125109296740724 0.133857419849901 0.123840103306383 0.117702641452145 0.118908931220662 0.119745986493235 0.124842626594273 0.124446531431982 0.119381498202412 0.132218050840888 0.125589032320741 0.135073911555771 5 5 - 21555085 21555631 21555341.727 21554947 21558255 - gene protein_coding_gene TRUE TRUE AT5G53130.1 CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1); calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel member of Cyclic nucleotide gated channel family Identical to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic nucleotide- and calmodulin-regulated ion channel 1) (CNGC1) [Arabidopsis Thaliana] (GB:O65717); similar to ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT1G01340.1); similar to ATCNGC13 (cyclic nucleotide gated channel 13), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G01010.1); similar to ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G46430.1); similar to cyclic nucleotide-gated channel C [Phaseolus vulgaris] (GB:AAN65366.1); similar to cyclic nucleotide-gated calmodulin-binding ion channel [Nicotiana tabacum] (GB:AAF33670.1); similar to putative calmodulin binding transporter protein [Hordeum vulgare subsp. vulgare] (GB:CAA05637.1); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.153304065449471 -1.82435499353419 0.0964326342926765 1 1.50209821192032 18.2908471509154 -0.153304065449471 0.0450243915973057 AT5G65650_at 5.89757956697963 6.13872335792477 6.517334286117 6.43926580281652 7.15730231651331 6.56967724093448 5.89279980730122 6.02733106196522 5.65009148269248 4.81421243410955 6.08511213730196 6.46034802760245 6.05756991788697 6.18252785207298 6.51204140394703 6.02758255868056 5.95344920893342 6.25845051167117 5.13031922193647 0.170790909451973 0.180451832821532 0.198324790837751 0.179524787574334 0.179912121717609 0.184283513123424 0.182872338875605 0.175532990344728 0.183543671959354 0.174526800043213 0.170069054792412 0.171482896962246 0.172789474548211 0.180533190091388 0.177208433041426 0.173176478780983 0.171103989975663 0.172018325272235 0.177372970121399 5 5 + 26256832 26257326 26257094.636 26256728 26258741 + gene protein_coding_gene TRUE TRUE AT5G65650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36660.1); similar to BAC19.4 [Lycopersicon esculentum] (GB:AAG01119.1); contains InterPro domain Protein of unknown function DUF1195; (InterPro:IPR010608) -0.192491050988815 -1.82403739309193 0.0964834383076913 1 1.50165941506771 12.0251731376565 -0.192491050988815 0.113168608021641 AT5G59440_at 5.27246258309118 5.83607678532042 6.45938341972137 6.38167168135597 7.07156079568728 6.66019827237915 5.58035892196566 5.50167385914804 4.08927303091134 4.61842611730222 4.75442601591995 5.30121021075667 5.67028853561662 5.49011987928754 4.81822794914392 5.41701658342155 5.64819251293518 5.21059813108912 5.69812936544737 0.247174207373907 0.235953168470967 0.254466299344634 0.243743851555558 0.238080095271556 0.256468254593330 0.239594086127002 0.245365101655096 0.270603552121066 0.247467460659556 0.243831049688943 0.236247248803277 0.235953168470967 0.243675188638287 0.244086985374572 0.240086996255968 0.252817556990240 0.250069248952468 0.238569553545527 5 5 + 23989220 23989919 23989525.364 23988457 23990150 + gene protein_coding_gene TRUE TRUE AT5G59440.1|AT5G59440.2|AT5G59440.3 thymidylate kinase family protein similar to Os07g0639900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060418.1); similar to putative thymidylate kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC45213.1); contains InterPro domain Thymidylate kinase; (InterPro:IPR000062) -0.199213952743738 -1.82269444882084 0.0966985294922617 1 1.49980440702303 11.1407746974128 -0.199213952743738 0.122259237265663 AT5G09850_at 8.00158074661336 7.96578302749179 8.6388110201945 8.61394583798677 9.05761369839252 8.51373663350353 7.97481664072392 8.2029070870593 7.78645149255613 8.1009369027118 9.59055131307521 9.40049563710474 9.32164942209585 9.36599539916898 9.23074181534975 9.42570752464147 8.8087712227741 9.18300716775243 7.82575694901464 0.127135421996220 0.126267138805549 0.133269055635222 0.124782559481154 0.125700935315658 0.136267407420170 0.126159886114821 0.125919815346077 0.139568361315212 0.134059385804944 0.125969900630999 0.127024821212420 0.123401739812482 0.129155007703840 0.130583076632791 0.126064501696077 0.139560677048816 0.126242771567074 0.146701571340958 5 5|0 -|/ 3063548 3064517 3064034 3063252 3065890 - gene protein_coding_gene TRUE TRUE AT5G09850.1 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G05140.1); similar to 52O08_11 [Brassica rapa subsp. pekinensis] (GB:AAZ67557.1); contains InterPro domain RNA polymerase II transcription factor SIII subunit A; (InterPro:IPR010684); contains InterPro domain Transcription factors TFIIS, elongin A, CRSP70, conserved; (InterPro:IPR010990); contains InterPro domain Transcription elongation factor S-II, N-terminal; (InterPro:IPR003617) 0.184512170199410 1.82208541747071 0.096796218970481 1 1.49896336804209 16.9687726960821 0.184512170199410 0.102340622727362 AT5G37930_at 6.86720835082109 6.9163906589354 8.17566498601834 8.15510003798673 8.97420811459516 8.32838870344432 7.01552527332674 6.70846485025472 7.25398732213678 6.93382041466717 8.03505311984547 7.6079311024332 7.84068936906409 7.98935541326667 7.69428644036999 7.95595053284136 7.57909800289602 8.10030125297792 6.89337943573873 0.217966943377645 0.202473430072267 0.217120328679850 0.1997839986835 0.206273485477261 0.215166542199334 0.217885980893215 0.210971064743575 0.225265703916771 0.204375116453267 0.205557223768995 0.21278385543632 0.205572918165034 0.204742941024854 0.217035355995915 0.199752414988663 0.224508059479146 0.210427095488786 0.204761451678364 5 5 - 15119487 15119957 15119731.273 15119430 15120899 - gene protein_coding_gene TRUE TRUE AT5G37930.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) protein, putative [Arabidopsis thaliana] (TAIR:AT1G66650.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 0.200495267298916 1.821430700235 0.0969013373073586 1 1.49805938958295 15.0813166444525 0.200495267298916 0.124094871565767 AT5G11340_at 6.18685421855226 6.89440837181316 7.44102394047393 7.57848082437524 7.51156522891508 7.29822102722815 5.98692189247596 6.41464248115452 5.02426274785505 4.98767585264278 6.86764773457854 6.94135715144652 6.80869537340633 6.07288941687888 7.03526223460292 6.57001165889401 6.57650624563453 5.73051957794493 5.37382762331899 0.223665486254937 0.214519214212639 0.215109482496587 0.219057132808883 0.211210965788314 0.224883483355334 0.218378242779329 0.216133896530499 0.230614138322461 0.231075283569218 0.212080284922364 0.208714009105964 0.215246796300503 0.237113327786787 0.213318471893378 0.208759615579442 0.222451106545957 0.231352936330812 0.224482198060798 5 5|0 +|/ 3619295 3621023 3620262.5 3619156 3621302 + gene protein_coding_gene TRUE TRUE AT5G11340.1 GCN5-related N-acetyltransferase (GNAT) family protein similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.1); similar to Mak3 protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52531.1); similar to Os01g0610400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043544.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.220920263333879 1.81820411371605 0.0974209111318629 1 1.49360666846882 12.7659897058463 0.220920263333879 0.149668567336683 AT5G05920_at 4.34007537474733 4.35680735506865 5.01998534047744 5.40465318433234 5.31171262353447 4.53129249663307 3.94246742118808 3.75334413959507 3.60034978739381 3.08631251764635 4.38558678374745 4.23427801279139 4.18469369419034 4.49862019014143 4.28204680550247 4.39725783366011 4.67693971895787 4.38789840691391 3.27150415617865 0.237081255528753 0.229124465257046 0.249805627541753 0.236688585409745 0.241517018372957 0.252108980832402 0.231102309049338 0.241962060260431 0.241919664908169 0.236212963692602 0.241909629163113 0.239463578981446 0.237160737736003 0.233999080771461 0.235957534782538 0.229273742549568 0.236144559823004 0.235588365110977 0.237625442200891 5 5 - 1777829 1778953 1778403.455 1777548 1779827 - gene protein_coding_gene TRUE TRUE AT5G05920.1|AT5G05920.2 DHS (DHS) Encodes a deoxyhypusine synthase. Identical to Deoxyhypusine synthase (EC 2.5.1.46) (DHS) [Arabidopsis Thaliana] (GB:Q9FI94;GB:Q9ASU5;GB:Q9C5Y5); similar to Deoxyhypusine synthase (GB:Q6RJS2); similar to deoxyhypusine synthase [Crotalaria retusa] (GB:CAG28987.1); similar to deoxyhypusine synthase [Crotalaria scassellatii] (GB:CAI91280.1); contains InterPro domain Deoxyhypusine synthase; (InterPro:IPR002773)|Identical to Deoxyhypusine synthase (EC 2.5.1.46) (DHS) [Arabidopsis Thaliana] (GB:Q9FI94;GB:Q9ASU5;GB:Q9C5Y5); similar to Deoxyhypusine synthase (GB:Q6RJS2); contains InterPro domain Deoxyhypusine synthase; (InterPro:IPR002773) 0.224644330251815 1.81769827427409 0.0975025967259415 1 1.49290894910604 8.43269424251925 0.224644330251815 0.154113169852224 AT5G64300_at 8.53318806540318 8.6966319135344 9.55271294248783 9.6019707946422 9.70215787134244 9.30229929382546 8.59800271476136 8.64944890477463 8.86629549012658 8.47377437444833 9.60626551630247 9.61735964916492 9.5646011928059 9.52804922614623 9.50271511624982 9.71060142203051 9.1444693488205 9.42662235255754 8.35588513588529 0.122394585870824 0.121179085594995 0.123984527734447 0.123485466024777 0.125879498410060 0.135449169792008 0.121179085594995 0.125073907868057 0.137898363314538 0.126578074000613 0.125186634597414 0.122137631482828 0.125413161729400 0.125086216852998 0.123250977406079 0.121767946037938 0.132711241831530 0.128300736464463 0.133592024212341 5 5 + 25737251 25737944 25737558.273 25735630 25738388 + gene protein_coding_gene TRUE TRUE AT5G64300.1 ATGCH (Arabidopsis thaliana GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. Identical to Riboflavin biosynthesis protein ribAB, chloroplast precursor [Includes: GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)] (RIBAB) [Arabidopsis Thaliana] (GB:P47924;GB:Q9SBA8); similar to riboflavin biosynthesis protein, putative [Arabidopsis thaliana] (TAIR:AT2G22450.1); similar to GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase [Solanum lycopersicum] (GB:CAA05308.1); similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] (GB:AAQ03091.1); similar to putative riboflavin biosynthesis protein ribA [Oryza sativa (japonica cultivar-group)] (GB:BAD09287.1); contains InterPro domain GTP cyclohydrolase II; (InterPro:IPR000926); contains InterPro domain 3,4-Dihydroxy-2-butanone 4-phosphate synthase; (InterPro:IPR000422) 0.167185912170078 1.81712597984317 0.0975950893788808 1 1.49211967903308 18.1185034683447 0.167185912170078 0.0757643160576978 AT5G47480_at 7.60268430914414 7.92945298717818 8.69101963640699 8.43842209938558 8.43448765417885 8.49490521879824 6.55474946268045 7.38865114859682 8.43051243152904 8.6426097004442 9.71003614026866 9.57832008227036 9.5252061980212 9.61031421992113 9.30654645098679 9.59192779957073 9.03529268933498 8.99908800110908 8.13185513418116 0.155317357180854 0.154276810903878 0.146024277876810 0.148436043536832 0.148967836605088 0.148846529727032 0.164920712843844 0.162796473247329 0.168036150718665 0.148022080528480 0.144063313515048 0.14807578699251 0.149148961778038 0.149932007812843 0.150657713563325 0.146648196518074 0.150072336936897 0.147709054003829 0.155097056775420 5 5 + 19279521 19280280 19280004.364 19274647 19280651 + gene protein_coding_gene TRUE TRUE AT5G47480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47490.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain RGPR-RELATED (PTHR13402); contains domain SIMILARITY TO UNKNOWN PROTEIN (PTHR13402:SF8) 0.230754631230307 1.81631776915462 0.0977258469100843 1 1.49100525291255 16.8524218327479 0.230754631230307 0.161379907847475 AT5G57090_at 1.72716943443885 1.90201130404641 2.40469639368737 2.15983964109087 2.31927059659405 2.14965572252353 2.50139525769121 2.01933321932068 2.5297043874056 2.27016044966565 1.97287112951351 2.14793296852460 2.29971471804778 2.40559139860187 2.41985329697087 2.03253060632292 2.01747697194512 2.25140261837517 2.28810543217252 0.231400120944017 0.237814356329696 0.23808020539329 0.233014775197889 0.234322212888697 0.235621982271869 0.238178409375612 0.242291142379992 0.238561537429921 0.231400120944017 0.232753903857861 0.231400120944017 0.242268815962146 0.231917959595302 0.231400120944017 0.234704579878481 0.23898386128063 0.233236415582685 0.241061227432803 5 5|0 +|/ 23120707 23121654 23121189.9 23117919 23121961 + gene protein_coding_gene TRUE TRUE AT5G57090.1 EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin:hydrogen symporter/ transporter Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Identical to Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux carrier AGR) (Polar-auxin-transport efflux component AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1) (AtEIR1) (WAVY6) (PIN2) [Arabidopsis Thaliana] (GB:Q9LU77;GB:O82810;GB:Q9SYT2); similar to PIN3 (PIN-FORMED 3), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G70940.1); similar to PIN1 (PIN-FORMED 1), transporter [Arabidopsis thaliana] (TAIR:AT1G73590.1); similar to PIN7 (PIN-FORMED 7), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G23080.1); similar to PIN1-like auxin transport protein [Populus tremula x Populus tremuloides] (GB:AAM54033.1); similar to PIN1-like auxin transport protein [Populus tremula x Populus tremuloides] (GB:AAG17172.1); similar to auxin efflux carrier protein [Medicago truncatula] (GB:AAM55298.2); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Auxin Efflux Carrier; (InterPro:IPR004776) -0.18409044538352 -1.81596680140122 0.0977826786294841 1 1.49052138462307 4.42596068115028 -0.18409044538352 0.102625577476865 AT5G63610_at 7.5689096722256 7.85045137146236 8.47102709311022 8.46600126098285 8.64004451964212 8.34339348929225 7.54519651413498 7.76349632548498 7.75329026334046 7.98814007480846 8.62236790001037 8.5733128031451 8.47769244556379 8.53355999038392 8.54250676052195 8.74690205142924 8.25206706388536 8.2515581720843 7.78947001505295 0.175437081455482 0.171907792800917 0.183599057426699 0.182833700191354 0.177577826534154 0.181921718179623 0.177568655342991 0.177682482108524 0.203203478493377 0.183176739323842 0.175747429868656 0.171689257681809 0.171689257681809 0.181607658397381 0.174260842275976 0.171689257681809 0.190503160971759 0.191059952594057 0.177856871351984 5 5 - 25480871 25481387 25481164.909 25480663 25483123 - gene protein_coding_gene TRUE TRUE AT5G63610.1 HEN3 (HUA ENHANCER 3); kinase significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. similar to CDC2/CDC2A/CDC2AAT/CDK2/CDKA,1 (CELL DIVISION CONTROL 2), cyclin-dependent protein kinase/ kinase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G48750.1); similar to cdc2MsE [Medicago sativa] (GB:CAA65981.1); similar to Os10g0580300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065512.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.169569225160717 -1.81499826483314 0.0979396692799409 1 1.48918632730642 16.2528797055146 -0.169569225160717 0.0802323729938323 AT5G47200_at 9.43535979652244 9.52376278672522 10.4714555117809 10.4428539103702 10.1662523220291 10.1463403143184 9.33681747587088 9.46008231398883 9.05401598458827 9.0512067202598 10.0283270170381 10.0568693482701 9.95821119243532 9.97195410625774 9.91576496360147 9.84266390724538 9.7461571601812 9.94232052340286 9.24157328389893 0.103592179442197 0.103249851169861 0.105173629496605 0.105892842558677 0.107012081326243 0.106523723425735 0.105826074516693 0.103735372675106 0.113479562757465 0.107913883928872 0.102801678839789 0.102801678839789 0.102801678839789 0.111679643066407 0.108966719397210 0.104722958326204 0.103519655867418 0.109218434168530 0.110055842051591 5 5|0 +|/ 19184706 19185921 19185476.5 19184129 19186183 + gene protein_coding_gene TRUE TRUE AT5G47200.1 AtRABD2b/AtRab1A (Arabidopsis Rab GTPase homolog D2b); GTP binding similar to RAB1C, GTP binding [Arabidopsis thaliana] (TAIR:AT4G17530.1); similar to GTP-binding protein, putative [Brassica oleracea] (GB:ABD64935.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.147052422705034 1.81432131435599 0.0980495334174575 1 1.48825340420911 19.3970566490606 0.147052422705034 0.0269342495837023 AT5G14105_at 6.85476108819509 6.82752737087414 8.21428506312904 7.99412867737877 8.21610019102839 7.6747975238872 6.43662458375014 6.25928049114097 5.51198659863509 6.05710776433388 6.37797153291852 6.98859811041473 6.90645842426014 6.83058583924876 7.06590665639034 7.23012095844595 7.5539828809356 6.40461513970413 6.13126629682852 0.221040020478269 0.214798655024464 0.224403381848162 0.223635183208446 0.225710795170151 0.224710022373688 0.216041113865122 0.216353348357470 0.230614633825386 0.224358432609784 0.213673697690174 0.213820706384988 0.219261833102408 0.214847658928658 0.211304285552053 0.216208086315996 0.217187374395379 0.23039717535603 0.230021023748594 5 5|0 -|/ 4552222 4552871 4552759.5 4551976 4553053 - gene protein_coding_gene TRUE TRUE AT5G14105.1 similar to Os05g0517800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056054.1); similar to Os03g0733000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051172.1) 0.18612994193347 1.81423853666966 0.098062975365059 1 1.48813933764560 13.7196382050341 0.18612994193347 0.105785814009216 AT5G08030_at 1.71914947859309 1.50703455584520 1.78206132875441 1.41131626006893 1.87220679922673 1.87868887603258 3.01105785855414 2.73279414798572 3.07350218204591 3.38880144889592 5.00145164961981 5.71517409032159 4.35423910248355 4.66168688596655 6.10192990784143 4.24207718987316 3.13213400117947 3.75433992571660 2.44848387803258 0.226239184120204 0.233354050323860 0.224852175750818 0.225107320491879 0.22876869564524 0.224852175750818 0.23259081011152 0.228978494326674 0.229842233102388 0.226899805041398 0.233572795328629 0.229923294362397 0.225622531356781 0.233142727340384 0.243857510610132 0.229928425404682 0.226928154783554 0.228799575631427 0.238502569756181 5 5|0 -|/ 2575163 2575739 2575413.3 2575034 2576784 - gene protein_coding_gene TRUE TRUE AT5G08030.1 glycerophosphoryl diester phosphodiesterase family protein similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G74210.1); similar to glycerophosphodiester phosphodiesterase-like protein [Manihot esculenta] (GB:AAV74406.1); similar to Os01g0763600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044335.1); similar to Os03g0603600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050628.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) 0.174168963018851 1.81213104607013 0.0984057707323694 1 1.48523609010748 5.78460946169097 0.174168963018851 0.0882268855172231 AT5G40950_at 10.0258919612796 10.3128092985875 10.2532976641546 10.3216560511658 10.5296057502630 10.1975928251602 10.769491831548 10.8814413378908 10.1430431900912 10.7197589778006 11.5386877967230 11.9068531712211 11.1489151664306 11.4175924860455 11.7463142618832 11.5204780338006 11.0416204626937 11.2683761752129 10.3343311899832 0.146613027316473 0.138064368385347 0.159069988505800 0.144981234047982 0.144360381416471 0.151458159463453 0.146919182094157 0.147056906310380 0.162685831069328 0.138064368385347 0.143208233655860 0.145916412058566 0.142818377964045 0.146354798281081 0.147135988600094 0.139481547789884 0.155468489726950 0.144190424070072 0.146422540898807 5 5|0 +|/ 16428137 16429024 16428524.6 16428010 16429291 + gene protein_coding_gene TRUE TRUE AT5G40950.1 50S ribosomal protein L27, chloroplast, putative (RPL27) Identical to 50S ribosomal protein L27, chloroplast precursor (CL27) (RPL27) [Arabidopsis Thaliana] (GB:Q9FLN4); similar to ribosomal protein L27 family protein [Arabidopsis thaliana] (TAIR:AT5G15220.1); similar to ribosomal protein L27 family protein [Arabidopsis thaliana] (TAIR:AT2G16930.3); similar to 50S ribosomal protein L27, chloroplast precursor (CL27) (GB:P30155); contains InterPro domain Ribosomal protein L27; (InterPro:IPR001684) -0.168679812488185 -1.81158382898770 0.0984949577120196 1 1.48448251882904 21.3352979134444 -0.168679812488185 0.0792582240109815 AT5G55750_at 0.549367576021916 0.576588843300296 0.437898804916737 0.552640159201001 0.405192183846528 0.748469058435809 0.615812883957314 0.681643137580181 0.808647994939712 0.589766755909494 0.845935613275387 0.318897519494268 1.06376191161978 0.697858015726542 0.56749545542065 0.381046352469502 0.46237002558371 0.497721066355762 0.86277575716339 0.213796276014131 0.215866229591729 0.229259436905701 0.214750563215237 0.228632972192101 0.213796276014131 0.217553784493164 0.218134007284207 0.222083040685458 0.215633325222802 0.21936638578678 0.215979463368221 0.225348464648146 0.214473644875046 0.22917181392561 0.217805471605407 0.225523514242628 0.219823405065123 0.218522577627937 5 0|5 /|- 22582100 22583010 22582372.667 22582027 22583247 - gene protein_coding_gene TRUE TRUE AT5G55750.1 hydroxyproline-rich glycoprotein family protein similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT4G13340.1); similar to PREDICTED: similar to Enabled homolog (Drosophila) [Strongylocentrotus purpuratus] (GB:XP_781549.2); contains domain SWI/SNF COMPLEX-RELATED (PTHR12802); contains domain SWI/SNF COMPLEX-RELATED (PTHR12802:SF3) -0.160257211108734 -1.81042554166214 0.0986839824316852 1 1.48288780759896 1.25000953807284 -0.160257211108734 0.0638379891754239 AT5G23400_at 1.13868631254788 1.50003540826694 1.21418489978815 0.941784196614944 1.52083363629786 1.15760929131848 1.20496558435596 1.30148395099776 1.38044230599831 1.42846724175987 2.43086082156343 2.6447594580198 2.23297532461071 2.37505028806734 2.33007071231659 1.98791353081189 1.81824773928637 1.96872403365453 1.86038552572111 0.193029093844273 0.1903229193295 0.194112129407829 0.190289839439647 0.188709414606301 0.189265520319971 0.193178247503240 0.192541275020374 0.196098531925744 0.194001425319737 0.193335537289735 0.191024675949383 0.189354159849844 0.188709414606301 0.193820599756239 0.189280604148258 0.195753526481002 0.189732334521861 0.201629260259315 5 5 + 7881820 7882307 7882028 7880338 7882637 + gene protein_coding_gene TRUE TRUE AT5G23400.1 disease resistance family protein / LRR family protein similar to disease resistance protein-related / LRR protein-related [Arabidopsis thaliana] (TAIR:AT2G26380.1); similar to H0402C08.6 [Oryza sativa (indica cultivar-group)] (GB:CAJ86230.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.182954650456337 1.81041048922479 0.0986864410696165 1 1.48286708689782 3.13745137487405 0.182954650456337 0.101797195077370 AT5G52350_at 0.340005983137292 0.485600102382176 0.375147464072659 0.527369913810751 0.592623382340412 0.44220976857164 0.365516614667529 0.624508516741409 0.276775790520747 0.668791245654537 0.0641542433194888 0.356034017391756 0.785010287234474 0.36985666819485 -0.180601433326028 0.369309966686229 0.239070288491495 0.354624886909424 0.702911773378234 0.206697628076309 0.206697628076309 0.206890946151708 0.217165804725373 0.206697628076309 0.206697628076309 0.206697628076309 0.210249845807453 0.220641322659861 0.226485920392123 0.212767096125358 0.216358725191538 0.211607243557653 0.206774610314291 0.206697628076309 0.209750703840630 0.215797970028646 0.213301833191123 0.214654618650868 5 5|0 +|/ 21273804 21274785 21274384.111 21272137 21274844 + gene protein_coding_gene TRUE TRUE AT5G52350.1 ATEXO70A3 (exocyst subunit EXO70 family protein A3); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70A2 (exocyst subunit EXO70 family protein A2), protein binding [Arabidopsis thaliana] (TAIR:AT5G52340.1); similar to Os11g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065801.1); similar to H0723C07.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86037.1); similar to Os04g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054320.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.159798046425345 -1.80786394315631 0.0991031961245608 1 1.47936279594814 0.891210369280759 -0.159798046425345 0.063365042704015 AT5G28940_at 2.0109188609061 2.29052923393084 2.49894616285742 3.10177917415416 1.49938820124578 2.45505504129568 1.79657824401120 2.44727595988524 2.72136385744765 2.36311669046172 2.21470335881511 2.03951646572716 2.19645189225418 2.24981995374279 2.15545903440847 2.25530712369741 1.86762132996587 2.53744829781134 2.59998563417131 0.223665066707172 0.216965717393899 0.229996379335282 0.227967851654218 0.218853224729689 0.225685316689133 0.225029643423875 0.233220967832911 0.224342803387797 0.216872115735006 0.217526869034764 0.218526509603078 0.216872115735006 0.220828543701135 0.220145409950462 0.218781416896232 0.219151770938402 0.226026942120111 0.219097076063669 5 5|0 -|/ 10985294 10986164 10985642.444 10985292 10987604 - gene protein_coding_gene TRUE TRUE AT5G28940.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G07630.1); similar to hypothetical protein 31.t00031 [Brassica oleracea] (GB:ABD65118.1); contains InterPro domain Protein of unknown function DUF223, Arabidopsis thaliana; (InterPro:IPR003871); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.293828242663908 -1.80742739207824 0.0991748011683758 1 1.47876230025618 4.63807368949231 -0.293828242663908 0.230773194304834 AT5G47920_at 1.67854871717042 1.40634591634846 1.03179402850099 1.33754077885076 1.21799222220932 1.31651547077023 1.41210546434291 1.22280283066124 1.41921713469700 1.68745704448302 1.64285682772535 1.77760380729106 1.27992889347352 0.934110998811411 1.99330415284174 1.21110238794128 1.42190282466455 1.5811306460222 1.16950856110815 0.198536635550309 0.192087828352214 0.202387294873886 0.198630476968652 0.193163969562153 0.196411939729400 0.19640810039386 0.197256418610827 0.197752992448581 0.193922652362599 0.190723871744691 0.193319157920477 0.199886371875781 0.190775768610601 0.196282041798168 0.194631450251004 0.198560846743053 0.202112380140752 0.192260433363806 5 5 - 19420684 19421190 19420926.727 19420399 19421314 - gene protein_coding_gene TRUE TRUE AT5G47920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13880.1); similar to OSIGBa0092E09.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66380.1); similar to hypothetical protein MtrDRAFT_AC157890g24v1 [Medicago truncatula] (GB:ABD33175.1); similar to Os04g0382400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052608.1) -0.168640616357503 -1.80720477497179 0.0992113340089369 1 1.47845610750561 2.78077408566135 -0.168640616357503 0.0798901298615864 AT5G65540_at 5.05010923587796 5.1810979336436 5.85685864605234 6.00347807863728 5.7619302977797 5.93720972106223 4.54011391210609 4.64192540333669 5.28624176712125 4.79048354796937 5.65163075359104 5.61682488878022 5.6438468929176 5.53418218413567 5.94403705012337 5.66879620647402 5.4311550866208 5.50815824220538 5.01518365283314 0.209750857105639 0.209885830342012 0.220673087405663 0.216330208717129 0.206657255272307 0.231212866880891 0.208456913268180 0.210380596487644 0.209852708757379 0.215634378577308 0.212577399395479 0.210409726654348 0.216341709560968 0.220912877501057 0.206657255272307 0.208991376626195 0.213311044165746 0.211297774668020 0.207462068627133 5 5|0 +|/ 26214573 26215308 26214965 26212915 26215548 + gene protein_coding_gene TRUE TRUE AT5G65540.1 similar to PFT1 (PHYTOCHROME AND FLOWERING TIME 1) [Arabidopsis thaliana] (TAIR:AT1G25540.2); similar to hypothetical protein [Trifolium pratense] (GB:BAE71249.1) -0.153241833833371 -1.80624532234248 0.099368926826517 1 1.47713666374264 10.6993230214356 -0.153241833833371 0.048868796458852 AT5G37670_at 3.37273847825127 3.82753596908375 3.91643713241286 4.18192282974311 4.62710119701113 4.47912490996951 2.79435236026245 2.51925668665316 3.05425986281697 3.44284681315342 3.39636359193907 3.23415717466173 3.36595360288475 3.4923562158719 3.50565654509052 3.80519614816625 4.10873184412765 3.52115185490698 2.92829890174611 0.218458528685773 0.226365334651201 0.214400177172003 0.219952603787139 0.222189210289163 0.214533517883352 0.212058027596483 0.215582997208835 0.233184250373089 0.217309822679874 0.214436438719142 0.215245486987458 0.214852660923424 0.221828033213537 0.21383181958259 0.212058027596483 0.224019024944889 0.222779017351874 0.216354041038685 5 5 + 14986275 14986621 14986476.909 14986221 14986739 + gene protein_coding_gene TRUE TRUE AT5G37670.1 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) similar to 17.6 kDa class I heat shock protein (HSP17.6A-CI) [Arabidopsis thaliana] (TAIR:AT1G59860.1); similar to Os06g0253100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057300.1); similar to cytosolic class I small heat-shock protein HSP17.5 [Castanea sativa] (GB:CAA08908.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.185367969537819 1.8056193575036 0.099471866555522 1 1.47627601760026 7.06255756114587 0.185367969537819 0.105959495991732 AT5G39350_at 3.04022366911699 3.3437517711748 3.47630557289825 2.88861245048506 3.27562181378375 2.84652693869851 2.71946714212103 2.07321020247858 2.75118954758787 2.75175571316086 2.77748129098742 2.7557750756019 2.78205621377349 2.63342869870436 2.91358667829086 2.68063299400862 3.14979493557166 3.18699093258549 3.09306773992562 0.200406879480204 0.204121057982524 0.210629260519301 0.204741347982276 0.200406879480204 0.204449853797541 0.204468569617401 0.207705675166848 0.207759479976701 0.207897361045646 0.202897881596678 0.203387741970777 0.20791916228854 0.205567936962719 0.207039918286743 0.201247233709656 0.206478582330965 0.204090478515904 0.204571856256600 5 5 + 15769632 15770136 15769865.455 15768157 15770190 + gene protein_coding_gene TRUE TRUE AT5G39350.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD27693.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.242606296683288 -1.80520974345598 0.099539280175907 1 1.47571291316743 5.82061795476058 -0.242606296683288 0.176420972225990 AT5G18100_at 7.89895599065601 7.77289061062853 8.31375046198252 8.17674751271996 8.92792680875486 8.261845656644 8.36299989862129 8.13259592433294 7.96960014708721 8.1906045172769 9.1567254372299 9.19147552673412 9.09342306480657 9.2036818730358 9.30516640175165 9.0965964636297 8.68284765570234 9.04062644689882 8.36313519719815 0.138717429138978 0.132753825390512 0.142527932980265 0.135286134566666 0.135578803072431 0.136800462265313 0.13709001274173 0.137333857127385 0.148921453807501 0.135223907141600 0.137513006587197 0.131680917222808 0.132652066530263 0.137029738841341 0.141264893808649 0.132315217023802 0.135648163153506 0.14113753778498 0.140659928738360 5 5|0 +|/ 5987262 5988668 5987871.125 5987189 5988887 + gene protein_coding_gene TRUE TRUE AT5G18100.1 CSD3 (COPPER/ZINC SUPEROXIDE DISMUTASE 3); copper, zinc superoxide dismutase A putative peroxisomal CuZnSOD inducible by a high-light pulse. similar to CSD1 (copper/zinc superoxide dismutase 1) [Arabidopsis thaliana] (TAIR:AT1G08830.2); similar to putative CuZn-superoxide dismutase [Populus tremula x Populus tremuloides] (GB:CAC33847.1); similar to putative CuZn-superoxide dismutase [Populus tremula x Populus tremuloides] (GB:CAC33846.2); contains InterPro domain Superoxide dismutase, copper/zinc binding; (InterPro:IPR001424) -0.200156697540764 -1.80391558321628 0.0997525452533112 1 1.47393421453405 16.8663463476647 -0.200156697540764 0.126153452958044 AT5G37310_at 5.034484889096 5.05979282207522 4.95606005640654 5.59471882792376 5.01339524385504 4.77478396555873 4.251093582184 4.67371049398475 4.54136236326061 4.30463109060918 5.17496515618907 5.76621747483275 5.49841176747238 5.65614955610198 5.70040331888414 5.09222726267451 4.90931722399237 4.9193620898415 3.97588166739161 0.233580252788586 0.221833638860794 0.232591872906254 0.226684809669199 0.223750960540843 0.241557962030218 0.228591470848288 0.223271287845789 0.232576296115773 0.231732132152031 0.221833638860794 0.223838000426705 0.224083412019480 0.239441202046576 0.225518918433689 0.228815103311670 0.231988848973997 0.224337975766533 0.233277207570701 5 5 - 14790073 14790905 14790607.455 14789742 14793437 - gene protein_coding_gene TRUE TRUE AT5G37310.1 transporter similar to endomembrane protein 70 family protein [Arabidopsis thaliana] (TAIR:AT1G08350.2); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT1G14670.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G01970.1); similar to Putative endosomal protein [Oryza sativa (japonica cultivar-group)] (GB:AAK52585.1); similar to putative syntaxin SYP111 [Oryza sativa (japonica cultivar-group)] (GB:BAC57816.1); similar to Endosomal membrane proteins, EMP70 (ISS) [Ostreococcus tauri] (GB:CAL57055.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) -0.21025593319209 -1.80380379544018 0.0997709863605897 1 1.47378060215501 9.7265500376367 -0.21025593319209 0.138882800683297 AT5G62750_at 1.62379173847611 1.44095414277772 2.00553857568885 1.97219482910467 1.6314289220848 1.7722165279995 1.62578398750531 1.63935655850082 2.55282880883552 1.80958918885876 1.98200450865512 1.46814283300113 2.01456483864449 1.66521145945663 1.82756169657956 1.35928081579273 1.87605548036497 1.76118527267864 1.71726117011149 0.167330543136700 0.170709791965014 0.172678829741276 0.166314190759411 0.166314190759411 0.167474366049250 0.167903959672696 0.16935623967849 0.173819649570697 0.166314190759411 0.177002653982105 0.169735632203939 0.167675762850777 0.171295629908709 0.170924032452715 0.166314190759411 0.171958143700141 0.171484284205005 0.173845250195439 5 5 - 25220923 25221238 25221025.455 25220675 25221343 - gene protein_coding_gene TRUE TRUE AT5G62750.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to KED-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC99371.1); similar to Os07g0164800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058963.1); similar to Os08g0398500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061745.1) -0.149647411251374 -1.79990637038278 0.100415875616176 1 1.46842788790538 3.59931345314151 -0.149647411251374 0.0404173442730807 AT5G42300_at 11.8511309829159 11.8493127521358 12.6132197069593 12.6528268580423 12.4738317575398 12.2545929908862 11.7897613961246 11.8631469041495 11.9532146552123 11.9234918510634 12.5475753296046 12.3909642185183 12.5278552289860 12.5559945495644 12.2374123327765 12.6027811607929 12.6618611672354 12.5295975433008 11.7977021037217 0.0682583564120159 0.0641227052807512 0.0662410578044981 0.0683990290770669 0.0645287791551117 0.0681836384670884 0.0672867816975457 0.0650756930111076 0.0705406432833891 0.0658472316513704 0.0678638239434653 0.0645135913897272 0.0639018318923542 0.0672847767338501 0.0657200791169702 0.064788349385194 0.0700231381352312 0.063371758543311 0.0650145746686786 5 5 - 16930839 16931032 16930922.364 16929561 16931158 - gene protein_coding_gene TRUE TRUE AT5G42300.1 ubiquitin family protein Identical to Ubiquitin-like protein 5 (UBL5) [Arabidopsis Thaliana] (GB:Q9FGZ9); similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT3G45180.1); similar to Os11g0145400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065730.1); similar to Ubiquitin [Medicago truncatula] (GB:ABE89730.1); similar to Os12g0143100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066134.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.149658938340727 1.79934325425940 0.100509365808843 1 1.46765497335254 24.3675902826008 0.149658938340727 0.0405934387875295 AT5G66250_at 8.55553035955303 8.4698997026665 9.20875484842632 9.2266217555231 9.76278186273334 9.0569876896279 7.72383222693285 7.26980710149215 8.37756823276733 7.80506181102218 8.7127313331122 8.55219020959093 8.7864233237763 9.2019188875307 8.47882403401572 9.0351265410704 8.7769993776204 8.89699078812724 7.84319400255121 0.113828116253042 0.113003109137228 0.120329305421842 0.113844371690324 0.114315670916779 0.120181742963443 0.122482165545742 0.116429727457864 0.118852657372230 0.123624911247626 0.112488984080931 0.114068786662723 0.112235179771084 0.116585659481037 0.118834980225551 0.116564776432637 0.111265325057156 0.114998662644539 0.124009152780618 5 5|0 +|/ 26486646 26487578 26486949.3 26485759 26487782 + gene protein_coding_gene TRUE TRUE AT5G66250.1|AT5G66250.2|AT5G66250.3 kinectin-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G17990.1); similar to putative calcium-dependent protein kinase CPK1 adapter protein 2 [Mesembryanthemum crystallinum] (GB:AAR06858.1) 0.215469248792878 1.79837557780959 0.100670207833601 1 1.46632704915323 17.0661562320206 0.215469248792878 0.146017128958495 AT5G06290_at 10.0876646910959 10.1982020073962 10.3158883441813 10.3522058499265 10.2986571903521 10.1654651519541 10.5622399834470 10.5262545090146 10.8124733711581 10.8358402039346 11.7780302045295 11.9905630272273 11.6872092446943 11.540389482771 12.0290915557788 11.9081726881096 11.5186082345180 11.9148356064002 10.8676581230932 0.0920959777536324 0.0818812300487977 0.0813339826610164 0.0824857156580683 0.0800881835567598 0.0841857961814265 0.0816584030162527 0.0813662406978898 0.088107952462218 0.0840991557828607 0.0834796517110914 0.0806758825613792 0.0830283155455517 0.0820441457068257 0.08267366497623 0.0794346349979965 0.0794346349979965 0.0815469305887065 0.0828746726995793 5 5|0 +|/ 1920230 1921117 1920699 1919214 1921426 + gene protein_coding_gene TRUE TRUE AT5G06290.1 2-cys peroxiredoxin, chloroplast, putative similar to 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] (TAIR:AT3G11630.1); similar to 2-Cys peroxiredoxin [Brassica napus] (GB:AAG30570.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866) -0.146795403030682 -1.79825952927675 0.100689512565420 1 1.46616782142107 21.6305820850371 -0.146795403030682 0.0312326672466825 AT5G15400_at 7.91607398965452 8.15116894672455 9.00577800191971 8.8521648250185 9.17448271047209 8.71871046326133 7.78979877414567 7.70445138027719 7.93522194901378 7.91477097985317 9.10256354482212 8.71773446726353 8.87354443773643 8.91692965912684 8.73082570285433 8.9914989602277 8.73504109844018 8.7361443044005 7.63844255706754 0.174842251809421 0.171107107963598 0.175624605880447 0.170110572727731 0.167420173747282 0.185775670169536 0.169736477841603 0.178499934842073 0.185800074716472 0.178253765568114 0.169584064835482 0.172677936035387 0.173424943280075 0.174597255150338 0.169000306166146 0.169556914126439 0.180433168480293 0.177951717725423 0.178317090337005 5 5|0 -|/ 4997844 4998710 4998258.9 4997614 5003143 - gene protein_coding_gene TRUE TRUE AT5G15400.1 U-box domain-containing protein similar to Os03g0427900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050414.1); similar to Ubiquitin fusion degradation protein-2 (ISS) [Ostreococcus tauri] (GB:CAL57913.1); contains InterPro domain U box; (InterPro:IPR003613) 0.176312125334111 1.79740405740815 0.100831924990725 1 1.46499420193920 16.7540855200194 0.176312125334111 0.093814011593127 AT5G04480_at 5.3418461941155 4.71517948970716 5.76252363786354 5.36218844313295 6.05868904290746 6.0534711314762 5.44576998784095 4.78645261126687 5.33999397070493 5.16007060549103 6.28048464429508 6.44675839171666 5.72862713153517 5.50047079405061 5.92768382264611 5.63650701720325 5.30920487599624 5.9807846375844 4.81164060470167 0.259082641890421 0.256536710675449 0.266810067905957 0.253182180513325 0.256704029588634 0.263496066502438 0.255668807085167 0.271099632798935 0.259915080400499 0.259123805816439 0.256613769700383 0.255484139762081 0.254434361689605 0.269405544662124 0.2552971097846 0.266230903232726 0.275238262061818 0.264699343550483 0.258266402659384 5 5|0 -|/ 1272020 1272614 1272430.1 1271516 1277986 - gene protein_coding_gene TRUE TRUE AT5G04480.1 similar to glycosyltransferase family protein 1 [Arabidopsis thaliana] (TAIR:AT4G01210.1); similar to Os10g0546200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065214.1); similar to Os01g0622000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043608.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) -0.237526476162022 -1.79669391219140 0.100950284099241 1 1.46402016362791 10.9183735129610 -0.237526476162022 0.171987611944658 AT5G53350_at 10.6881619268652 10.6746544036843 11.6595774347349 11.6586165209587 11.7310395905336 11.4263183201553 11.0502174884 10.8877353575285 10.6546180178774 10.8122406565692 11.3240880004555 11.137059552547 11.5766833502071 11.4607626263683 11.0315853101082 11.7317820033591 11.5840095553652 11.4918002402324 10.8210963911658 0.0827357098769351 0.082000120842252 0.0838244546985309 0.0820184597885283 0.0805208579899827 0.0878713324452755 0.08340579109771 0.0833411663958693 0.0875263488271372 0.0805208579899827 0.0818856421999755 0.081568721091573 0.0805511503094677 0.0884361846529633 0.086268830124511 0.0805208579899827 0.084846763704618 0.084444466287594 0.0818459532714575 5 5|0 +|/ 21663717 21664700 21664276.4 21661124 21664933 + gene protein_coding_gene TRUE TRUE AT5G53350.1 CLPX (Clp protease regulatory subunit X); ATPase CLP protease regulatory subunit CLPX mRNA, nuclear gene similar to ATP-dependent Clp protease ATP-binding subunit ClpX, putative [Arabidopsis thaliana] (TAIR:AT1G33360.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD21479.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD15818.1); similar to ClpX, ATPase regulatory subunit [Medicago truncatula] (GB:ABE81693.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ClpX, ATPase regulatory subunit; (InterPro:IPR004487) 0.157008147461691 1.79543630224931 0.101160199514406 1 1.46229568363513 22.3119766395414 0.157008147461691 0.0598075696359075 AT5G35670_at 2.35040055360278 2.44199568837591 2.08167077833764 1.76474086691722 1.54603925699184 1.60319735306448 1.96120069254047 2.04919712743338 1.99953061615126 2.26490498678169 2.9519760363249 3.40718976668084 2.45460906519458 2.25917995105950 3.05701003816561 2.5090572143228 2.5232252084803 2.57458819502459 2.22173443960721 0.214283229875654 0.215233413092748 0.211007128122554 0.208039065371289 0.209579937963969 0.210744561390976 0.208896802351247 0.21760594899771 0.212101552012552 0.212196816424975 0.218135983613486 0.212869188043454 0.208488320842320 0.215515927835458 0.211884329530841 0.216399339852696 0.208039065371289 0.212082480339464 0.208039065371289 5 5|0 +|/ 13874381 13875070 13874741.9 13873333 13875289 + gene protein_coding_gene TRUE TRUE AT5G35670.1 IQD33 (IQ-domain 33); calmodulin binding similar to IQD3 (IQ-domain 3), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G52290.1); similar to IQD4 (IQ-domain 4), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G26410.1); similar to Os05g0123200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054511.1); similar to putative SF16 protein [Oryza sativa (japonica cultivar-group)] (GB:AAV33309.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.157024576912987 -1.79508505462647 0.101218899496205 1 1.46181414616574 4.41438584728464 -0.157024576912987 0.0599090796938004 AT5G40810_at 10.2491096663411 10.3610855351775 10.8031904225963 10.7981316187810 10.7283958626103 10.2189599367289 10.5703439629663 10.5971290257001 9.81938542586603 10.0728056509460 10.6854181435691 10.7509582234840 10.6424977113081 10.6595120038370 10.7802890723476 10.6684809982171 10.3674277380278 10.5961739103220 9.88441488709818 0.08673339407888 0.085748977310875 0.0892544242143077 0.087600504959523 0.0858229067878308 0.101086880474018 0.08785405494133 0.085748977310875 0.106370844766296 0.0875644441243675 0.0886442918391553 0.085748977310875 0.0870187013020838 0.0883848369435046 0.0862776057360592 0.0864085415590319 0.0944734763005527 0.0901314945565888 0.093989208348815 5 5|0 +|/ 16358315 16359519 16358795.8 16357121 16359872 + gene protein_coding_gene TRUE TRUE AT5G40810.1 cytochrome c1, putative similar to cytochrome c1, putative [Arabidopsis thaliana] (TAIR:AT3G27240.1); similar to Cytochrome c, monohaem [Medicago truncatula] (GB:ABE81122.1); contains InterPro domain Cytochrome c, monohaem; (InterPro:IPR009056); contains InterPro domain Cytochrome c region; (InterPro:IPR012282); contains InterPro domain Cytochrome c1; (InterPro:IPR002326) -0.173745512489990 -1.79361406341911 0.101465066937753 1 1.45979801659646 20.8254832770839 -0.173745512489990 0.0903879914001605 AT5G11460_at 3.49046372859 3.39434248094606 4.24231610294043 4.54012544124049 4.19539212573674 3.68693289954219 4.33395462136527 4.42466280426761 3.69811714798677 4.11873692934462 4.95694976226544 5.26281310034685 4.88620223913408 5.05167173334185 4.70018330847785 4.58127452542081 5.08778084301744 4.69597607439832 3.99615137175636 0.203513811158622 0.203758430077766 0.206408652859071 0.213201736255635 0.207583577883062 0.218667354523609 0.207334260759460 0.209126368921407 0.223608161771878 0.214278191936730 0.203513811158622 0.206012098231120 0.210099243737385 0.219961011323199 0.214186032865072 0.214161929072172 0.210346177827673 0.214468481192198 0.20632898920037 5 5 - 3657065 3657883 3657533 3656812 3658932 - gene protein_coding_gene TRUE TRUE AT5G11460.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.2); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABE83632.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) -0.182977020244618 -1.79218449216505 0.101704825720798 1 1.45783943596196 8.45878624124339 -0.182977020244618 0.104506743662169 AT5G27550_at 3.04901256869967 2.61338126123540 3.05024317815438 2.69096874378311 2.80580193609608 2.65274702696128 2.70749956570547 2.83539030479901 2.78128388656310 2.75770039317826 2.74889072429071 2.91744771091181 3.14240773050887 2.75765684755053 3.19001360411262 2.71325465085123 2.99167247641147 3.28945890882870 2.26921769175760 0.235328838249018 0.230024775781621 0.249007515449094 0.235851773150402 0.236605902547524 0.233013435724481 0.226643543638497 0.228831267256738 0.242041820089733 0.235575390722617 0.222477039889551 0.228058944610463 0.226553068763311 0.221847546238599 0.224241637884338 0.221847546238599 0.238848969166659 0.225099522508559 0.237036295166156 5 5|0 -|/ 9728489 9729401 9728868.7 9728450 9730308 - gene protein_coding_gene TRUE TRUE AT5G27550.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT2G22610.1); similar to Os05g0397900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055470.1); similar to kinesin motor protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99856.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.182204379203311 -1.79051300445498 0.101985812060974 1 1.45555039388881 5.58642273427075 -0.182204379203311 0.103635704090142 AT5G12130_at 8.65209359265005 8.87909642923432 9.27387432664868 9.1026517090753 9.49569575424423 9.16767651616076 9.08842497198923 9.07246300490267 9.10724511842546 8.65337972091237 9.79800103594412 9.99161041484571 9.4489044728662 9.62077060648816 9.61406338408872 9.92817416588672 9.2368714865133 9.62276335356958 8.68834637740472 0.166165332604685 0.153814639241501 0.171413403147736 0.163352712272978 0.153026903148540 0.159986407129466 0.158658795973885 0.154438925282633 0.171084632569997 0.161380355998352 0.156694556778139 0.155521468796365 0.158884955867840 0.170712591866617 0.162796181944645 0.153026903148540 0.165600999597102 0.164313348018116 0.161145723054852 5 5|0 +|/ 3920681 3922096 3921334.444 3919595 3922486 + gene protein_coding_gene TRUE TRUE AT5G12130.1 PDE149 (PIGMENT DEFECTIVE 149) similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57657.1); similar to Os05g0121200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054496.1); contains InterPro domain Integral membrane protein TerC; (InterPro:IPR005496) -0.164405917472879 -1.79047605905381 0.101992030771602 1 1.45549981039068 18.3284813400829 -0.164405917472879 0.0751740530996247 AT5G57160_at 5.68684417168863 5.7241019878234 6.44148843048966 6.51847930565166 6.92103836119592 6.57358108999301 5.22968412307908 4.88050908699759 5.72809796892944 5.73826959130809 6.04595267660405 6.14134630874929 6.10083705148471 5.83349769941072 6.01561872877301 6.24147852906545 6.29145189203141 6.14253165409687 5.4203558418018 0.202771788423101 0.206307638703383 0.212197531436189 0.211557025996892 0.206888205043768 0.210271501252301 0.200274559370528 0.205151372431037 0.222414395154755 0.209426634494510 0.199908567135668 0.201508657037932 0.204305002512912 0.214816873376933 0.204623070130694 0.205269814071060 0.213648646415476 0.210681391506112 0.202782691594127 5 5 - 23172385 23172920 23172585 23172194 23178972 - gene protein_coding_gene TRUE TRUE AT5G57160.1 ATLIG4 (Arabidopsis thaliana DNA ligase IV) Identical to DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) (LIG4) [Arabidopsis Thaliana] (GB:Q9LL84;GB:Q9LU70); similar to ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1), ATP binding / DNA ligase (ATP) [Arabidopsis thaliana] (TAIR:AT1G08130.1); similar to DNA ligase IV [Populus nigra] (GB:BAF03051.1); similar to OSIGBa0113I13.3 [Oryza sativa (indica cultivar-group)] (GB:CAH66777.1); similar to Putative DNA ligase 4 (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) (GB:Q7X7E9); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain ATP dependent DNA ligase, central; (InterPro:IPR012310); contains InterPro domain ATP-dependent DNA ligase; (InterPro:IPR000977); contains InterPro domain ATP dependent DNA ligase, C-terminal; (InterPro:IPR012309); contains InterPro domain DNA ligase, N-terminal; (InterPro:IPR012308) -0.170968983886310 -1.78978539879852 0.102108347468311 1 1.45455429326385 11.8622143787182 -0.170968983886310 0.0865213614615804 AT5G01380_at 1.77886404229256 2.4081570741545 1.96312016458054 2.21931346588864 1.78400044091014 1.77649562616006 1.63566240694368 1.95193655622545 2.48402222160192 2.16924492001954 2.15792469839077 1.9567264569866 2.63197368089506 2.29429069594958 2.22183412204882 2.23559062863943 2.20717706987406 2.69674321764950 2.28511489374639 0.196748303929005 0.199779380541928 0.199926899494515 0.211523993051285 0.199064843872156 0.197950546392316 0.199989730660701 0.201787970018226 0.210767161280926 0.20055626245229 0.200143153931866 0.197775284313035 0.202248299426357 0.204839202984228 0.205391140265915 0.197306331045889 0.201718510379052 0.205504022528328 0.201539098207196 5 5 - 155831 156340 156082.636 155638 157600 - gene protein_coding_gene TRUE TRUE AT5G01380.1 transcription factor similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT2G38250.1); similar to OSJNBa0041A02.12 [Oryza sativa (japonica cultivar-group)] (GB:CAD41865.2); similar to B0403H10-OSIGBa0105A11.17 [Oryza sativa (indica cultivar-group)] (GB:CAH67865.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.201314290428237 -1.78957292948171 0.102144154531803 1 1.45426345798273 4.2462320136912 -0.201314290428237 0.129702177425813 AT5G10780_at 9.8475513310038 10.1318465892999 10.5613789837999 10.7585611568085 11.2261141935750 10.6651668249634 9.90919395794834 9.64820568549502 9.7093170229739 9.2588285904484 10.1871437509038 10.1521982320551 10.3152559081694 10.302935799554 10.0491584515680 10.1149015386911 9.88293979566386 10.2993239188801 9.13678509139746 0.106816766899037 0.103441472236614 0.103182870745664 0.104118023672179 0.106147513189558 0.105591538807866 0.103895872895072 0.103378121054927 0.111705954364440 0.108717469882954 0.101560686213037 0.100825062641254 0.103184960216874 0.104228582234848 0.102756257925594 0.101270911977152 0.115072930393012 0.100825062641254 0.105824322342605 5 5|0 +|/ 3408457 3409736 3409118.3 3408280 3410071 + gene protein_coding_gene TRUE TRUE AT5G10780.1|AT5G10780.2 similar to Os03g0360500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050154.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96076.1); contains InterPro domain Protein of unknown function DUF1077; (InterPro:IPR009445) 0.195866485160681 1.78921125458026 0.102205133253677 1 1.45376842418898 20.1091485450495 0.195866485160681 0.122671398665958 AT5G16460_at 1.38475234961327 1.34342226463578 1.49163903725352 1.51825688345145 1.14482017617005 1.31379601554713 1.41457757881175 1.43864814327800 1.72771443339627 1.79250200475301 1.75148224733312 1.51267485237806 1.48016825987788 1.79647168852941 1.60913600817918 1.45033664551932 2.00671104963161 1.93988534501420 1.69236555219498 0.188641338440662 0.184380360220750 0.191710867695956 0.188028723761377 0.194368300125841 0.185664571309848 0.194108253773356 0.183930342234087 0.191003727154078 0.190451534556995 0.190414561292671 0.183478658392222 0.189683021834429 0.19495347042759 0.194569285820417 0.186481508916509 0.190843004287071 0.189446082470581 0.184168624303858 5 5 - 5377217 5377592 5377381.364 5377088 5378536 - gene protein_coding_gene TRUE TRUE AT5G16460.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G34380.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29760.1); similar to hypothetical protein MtrDRAFT_AC148171g21v1 [Medicago truncatula] (GB:ABE89808.1); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4 (PTHR21212:SF2); contains domain FAMILY NOT NAMED (PTHR21212) -0.145874857782566 -1.78853865187190 0.102318622893587 1 1.45284794686456 3.09668185218142 -0.145874857782566 0.0307379925876737 AT5G09960_at 8.32013389630746 8.44253849407585 9.34093278576087 9.30968422365766 9.53019931797629 9.55437896037662 8.53904764224864 8.57678709632287 7.96985561217561 8.08934485273264 9.3410672640648 9.0727340795667 9.02728675849113 9.1140437841752 8.9034852591632 8.96661764130916 9.074686501986 8.54775184571876 8.13173011004153 0.103755221310765 0.100281626249855 0.106117862645969 0.107766154625428 0.0986478817262926 0.106153370108039 0.1028553710399 0.102895560887279 0.115877563208209 0.121587431629656 0.100856222989453 0.099272680225221 0.108038175299457 0.106828374388771 0.0996013105632256 0.0992607434375444 0.107903211381182 0.110988594935977 0.117252934050868 5 5|0 +|/ 3107122 3107339 3107242.6 3106321 3107830 + gene protein_coding_gene TRUE TRUE AT5G09960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64850.1); similar to 4D11_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67518.1) 0.144156242412610 1.78825411933078 0.102366667203143 1 1.45245860687023 17.4865141354871 0.144156242412610 0.0231972529141544 AT5G11800_at 5.32783340457461 5.34869947805366 5.36105875095333 5.4572892082994 5.89776791171027 5.67830938186323 4.7011223198912 4.74744125140316 4.73046677419832 5.15706822176321 6.35881991487767 6.32558181084385 6.38466714305224 5.8320948338633 6.04735561271615 6.21471303314812 5.76181017379488 6.01594815053296 5.19435056090050 0.203027555985670 0.203889712055669 0.218451679522138 0.207521609834949 0.205070230078772 0.219202092112651 0.221607458294792 0.208206930471234 0.214840269236934 0.205478861193266 0.208511739760956 0.211284391864031 0.211828397500550 0.213387339243368 0.207715682096805 0.204554651006971 0.213521943274619 0.208918856836754 0.211365710506866 5 5|0 -|/ 3803644 3804617 3804316.571 3803337 3808208 - gene protein_coding_gene TRUE TRUE AT5G11800.1 KEA6 (K+ efflux antiporter 6); potassium:hydrogen antiporter member of Putative potassium proton antiporter family similar to ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G19600.1); similar to KEA5 (K+ efflux antiporter 5), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G51710.1); similar to Os06g0561200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057872.1); similar to Putative potassium/proton antiporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19118.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) -0.149326826159112 -1.78807852660432 0.102396326900060 1 1.45221834990579 10.8873997232058 -0.149326826159112 0.0423906870038472 AT5G39040_at 7.15452730833145 7.28335870396955 8.44890159434314 8.59869333892996 7.81270060415309 7.53387582280966 7.00190386197759 6.88126338925396 6.15516504222343 6.18931360079823 7.38716096421503 7.71519863464416 7.2350751592064 7.46031067777109 7.23908952014009 7.62376427900838 7.52809978429453 7.48216184083 6.03139403527391 0.145739996209373 0.144523531722809 0.153699082193911 0.158934497452752 0.144523531722809 0.152910989480477 0.144523531722809 0.149597265160080 0.155360480921358 0.153202888958361 0.148272727753091 0.145128931098806 0.146746953287649 0.144523531722809 0.150668430871090 0.144804367857355 0.148514807360347 0.150312267404714 0.14831631259251 5 5 + 15645941 15646810 15646484.727 15642808 15647031 + gene protein_coding_gene TRUE TRUE AT5G39040.1 ATTAP2 (Arabidopsis thaliana transporter associated with antigen processing protein 2); ATPase, coupled to transmembrane movement of substances member of TAP subfamily similar to PGP5 (P-GLYCOPROTEIN 5), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G01830.1); similar to putative ABC-transporter-like protein [Sorghum bicolor] (GB:AAM47580.1); similar to putative ABC transporter [Triticum monococcum] (GB:AAL74186.1); similar to putative ABC transporter [Hordeum vulgare subsp. vulgare] (GB:AAG49002.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.157676838061902 1.78741507516781 0.102508462408507 1 1.45131067939922 14.3814773281105 0.157676838061902 0.0627147039756251 AT5G63730_at 2.13976643881023 1.91067649144616 2.16202931065154 2.21134619127857 1.85576737266794 2.33686395730708 1.95884215147935 2.03031279226721 2.52550204249997 2.43262965262121 2.36639939703228 2.29699030138836 2.74859022479382 2.61992729125916 2.43927256035781 2.08892992875122 2.68768397438579 2.62898818285501 2.57861632868899 0.223604957681829 0.220419784791865 0.225297007822621 0.218615746405065 0.218615746405065 0.218615746405065 0.219347167722768 0.230475624767935 0.225427302330046 0.230580284387027 0.218661258079581 0.218615746405065 0.226908268251237 0.219832969364573 0.226204243343648 0.219813760430064 0.224483530536645 0.220891841989241 0.220811608285530 5 5 - 25525362 25525885 25525571.636 25525326 25526932 - gene protein_coding_gene TRUE TRUE AT5G63730.1 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63750.1); similar to OJ990528_30.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE02043.2); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867) -0.174629733981922 -1.78277492483668 0.103295864861387 1 1.44496713663423 4.574124125175 -0.174629733981922 0.0934297007873408 AT5G15930_at 7.13382552350036 7.07091794893067 7.46959072218831 7.20658418587197 8.1449185499761 7.63890716811567 6.93083954676433 7.0730076368756 7.29093967962669 7.16240063604588 8.35558572470214 8.3868647818916 8.10072970564268 8.3022076926388 8.43120440237764 8.35959913155808 7.963194343927 8.1403532643943 7.21830975319069 0.164968875539384 0.160158153768455 0.157307088890228 0.159510132778753 0.159263481148484 0.159259233440262 0.167729609329922 0.164793908623621 0.171174749938424 0.169381640662152 0.159366752336368 0.161913531086257 0.157026605557040 0.165914588661080 0.161678568337458 0.159856231459254 0.166014124670315 0.161599552643886 0.174266937828767 5 5|0 +|/ 5201124 5202223 5201774.667 5199714 5202452 + gene protein_coding_gene TRUE TRUE AT5G15930.1 PAM1 (PLANT ADHESION MOLECULE 1); RAB GTPase activator Encodes a putative plant adhesion molecule. similar to plant adhesion molecule, putative [Arabidopsis thaliana] (TAIR:AT3G02460.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96952.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) -0.180423349862932 -1.78204041642835 0.103421009594494 1 1.44396374138071 15.0729992788675 -0.180423349862932 0.102291129707532 AT5G51810_at 1.33698407937786 1.34737849248714 1.56124432777850 1.32643502833418 1.91425853736011 1.33230570128932 1.74563159922823 1.6705929255875 1.96437518902511 1.90666419565951 1.89108249065727 1.97757839684977 2.61379757067603 1.65906799055444 1.64936931162966 1.74522543596769 1.67779180402495 1.68350157879684 2.07356649578607 0.187563614122513 0.186391167092573 0.18825173885547 0.188889449491404 0.183317789693997 0.184255504109888 0.184952103343980 0.183345453585802 0.184430093663402 0.187920896992368 0.192435732334434 0.187595852010880 0.196341445021928 0.188978287084784 0.184016001577394 0.181871413281839 0.182545046875456 0.187023195393993 0.197400013252747 5 5|0 -|/ 21072654 21073184 21072980.7 21072414 21074034 - gene protein_coding_gene TRUE TRUE AT5G51810.1 ATGA20OX2/GA20OX2 (Gibberellin 20 oxidase 2); gibberellin 20-oxidase Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock. Identical to Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20 oxidase 2) (GA 20-oxidase 2) (20ox2) [Arabidopsis Thaliana] (GB:Q39111); similar to GA5 (GA REQUIRING 5), gibberellin 20-oxidase/ gibberellin 3-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT4G25420.1); similar to (GB:2116434A); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.185334634719738 -1.78186201077941 0.103451426974060 1 1.44372005649067 3.45120989437276 -0.185334634719738 0.109386887498561 AT5G51940_at 8.82894522840154 8.94018888358829 9.5307715086629 9.48980475777337 9.70103862353293 9.6070760506596 8.69460650598185 8.8204120285623 8.66870444894919 8.53513290441714 9.19117816497342 9.16219793101229 9.12764291724873 9.14121539141801 8.89021155824334 9.22020126509897 9.14492729452425 8.92196997779371 8.63287611698435 0.106902849501987 0.107120861219419 0.107284586185726 0.107630510194228 0.109529215264564 0.114193540158167 0.109760356585837 0.110405198388999 0.119064937673484 0.111838017627367 0.110441663225364 0.107812588022332 0.107846897761983 0.107242588117286 0.109632463716257 0.106353434439282 0.126155324509569 0.109509007191701 0.113192609328821 5 5|0 +|/ 21121918 21122990 21122612.6 21121797 21123173 + gene protein_coding_gene TRUE TRUE AT5G51940.1 DNA-directed RNA polymerase II, putative similar to DNA-directed RNA polymerase II, putative [Arabidopsis thaliana] (TAIR:AT2G04630.1); similar to Os07g0463100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059582.1); similar to Os03g0586600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050570.1); similar to DNA-directed RNA polymerase IIa [Nicotiana tabacum] (GB:AAD34613.1); contains InterPro domain DNA-directed RNA polymerase, 14 to 18 kDa subunit; (InterPro:IPR006111); contains InterPro domain RNA polymerase subunit, RPB5/RPB6-like; (InterPro:IPR009026); contains InterPro domain RNA polymerase subunit, RPB6/omega; (InterPro:IPR012293); contains InterPro domain RNA polymerase Rpb6; (InterPro:IPR006110) -0.146194350820644 -1.78163266635882 0.103490541151216 1 1.44340681197293 18.05769589139 -0.146194350820644 0.0340480026974164 AT5G57580_at 8.90606393586562 9.06592679808645 9.457271967317 9.80841934704789 10.0542462162062 9.72773709879633 7.9982733644928 8.06271959690065 8.65419939216608 7.7582731580211 8.7832038779054 8.6847680915588 8.75903840807783 9.03222177515226 8.30783556896592 8.88153373785121 8.32295508222795 9.03241181202004 7.6523357076225 0.158730578308289 0.16210342401103 0.164803493030953 0.162220347654814 0.161018205248795 0.165185786918361 0.181119639376804 0.168194372925663 0.159737729241135 0.170702388492157 0.155878019186887 0.157756554369926 0.155878019186887 0.156195201385244 0.165678437001104 0.15860412552678 0.180814663239559 0.156545165339814 0.163327875521124 5 5 - 23332422 23332756 23332586.6 23331942 23335351 - gene protein_coding_gene TRUE TRUE AT5G57580.1 calmodulin-binding protein similar to calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G18750.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to Os02g0562300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047151.1); similar to calmodulin-binding protein (GB:AAB37246.1); similar to Os04g0444200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052891.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) 0.171205330448069 1.78161843779062 0.103492968244990 1 1.44338737888832 17.5086316890007 0.171205330448069 0.088176766456049 AT5G26670_at 3.31511312888559 3.28051960443909 3.13186880796525 2.92650239352231 2.71573858231744 3.40692568278324 4.12731619461357 3.64638738649371 3.87108186581733 4.09678572338487 7.37691522575206 7.9369360292806 5.80553335685302 7.64218946652066 8.53699987906184 6.2534536308525 5.35831371950438 6.92385262883318 4.96821836966792 0.315320073652954 0.32622861347041 0.314336929483447 0.339726899026059 0.340318898508638 0.320740468089758 0.314336929483447 0.324776174519036 0.322625698430629 0.317441336348604 0.318880648771426 0.325243406165886 0.317249242959092 0.315931947421689 0.329166799840283 0.325188856103023 0.321897782052784 0.32579919219856 0.314336929483447 5 5|0 +|/ 9319998 9320792 9320394.833 9318283 9320994 + gene protein_coding_gene TRUE TRUE AT5G26670.1|AT5G26670.2 pectinacetylesterase, putative similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT3G05910.1); similar to Pectinacetylesterase [Medicago truncatula] (GB:ABD33181.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016)|similar to pectinacetylesterase, putative [Arabidopsis thaliana] (TAIR:AT3G05910.1); similar to pectin acetylesterase [Eucalyptus globulus subsp. globulus] (GB:ABG34280.1); contains InterPro domain Pectinacetylesterase; (InterPro:IPR004963) 0.216837025364204 1.78158421195371 0.103498806663406 1 1.44334063426307 8.96444792014702 0.216837025364204 0.150109754361479 AT5G17380_at 8.93711573510847 9.1215208246186 10.0016704693066 10.1687484661836 9.53211029455443 9.38577599900782 9.01314949360299 9.31241820903122 8.77582037618516 9.03959240559372 9.32205448469296 9.19733875160364 9.32426880849799 9.3059138985921 9.11806257065171 9.55922234570213 9.29618186365169 9.36046451748928 8.65388472458912 0.105130129885670 0.102447965501880 0.102694407852911 0.103646491036606 0.104098874537989 0.107419986349921 0.105141249361067 0.106056931527575 0.123085062584649 0.108361555682505 0.104037392127509 0.102447965501880 0.102447965501880 0.109212684157527 0.110043572896594 0.102447965501880 0.105021892983844 0.106802063721786 0.109079236357776 5 5 - 5724988 5725539 5725237.455 5724761 5726748 - gene protein_coding_gene TRUE TRUE AT5G17380.1 pyruvate decarboxylase family protein similar to CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1) [Arabidopsis thaliana] (TAIR:AT3G48560.1); similar to Os01g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043144.1); similar to COG0028: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Escherichia coli E24377A] (GB:ZP_00700406.1); similar to thiamine pyrophosphate enzyme-like TPP binding re (GB:ZP_01503010.1); contains InterPro domain Thiamine pyrophosphate enzyme, N-terminal TPP binding region; (InterPro:IPR012001); contains InterPro domain Thiamine pyrophosphate enzyme, central region; (InterPro:IPR012000); contains InterPro domain TPP-binding enzymes; (InterPro:IPR000399); contains InterPro domain Thiamine pyrophosphate enzyme, C-terminal TPP-binding; (InterPro:IPR011766); contains InterPro domain 2-hydroxyphytanoyl-CoA lyase/oxalyl-CoA decarboxylase; (InterPro:IPR012275) -0.161716463801077 -1.78017548594933 0.103739374567271 1 1.44141702597306 18.5008324733765 -0.161716463801077 0.0719574077923016 AT5G01500_at 6.31985357754655 6.48927499174501 5.88750514451535 6.06031614461208 6.24152141126629 5.26616233272084 7.17856320142483 6.26421323520701 2.82658617769619 4.71564791982597 6.18058386208822 6.41364200581604 5.45538304456603 5.98149168808347 6.19600086448342 5.56701755985461 5.36894664138006 5.62119419066742 3.7578675563943 0.213896204638142 0.215945498134582 0.22301288481598 0.213896204638142 0.214563148300483 0.223395753606382 0.215868351655802 0.222715717140352 0.244831094314229 0.235320998013158 0.217730139206466 0.221703803210103 0.213896204638142 0.217911803116169 0.213896204638142 0.21426270337021 0.225484444396997 0.223794408490471 0.225750062373366 5 0|5 /|+ 200618 201209 200842.667 198942 201551 + gene protein_coding_gene TRUE TRUE AT5G01500.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G51870.1); similar to Os01g0265200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042669.1); similar to Mitochondrial ADP/ATP carrier proteins (ISS) [Ostreococcus tauri] (GB:CAL56121.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.293554449600626 -1.78013931533520 0.103745558111198 1 1.44136764515189 11.0207927715912 -0.293554449600626 0.235120631587767 AT5G45380_at 9.14771323794355 9.57544272737526 10.6344411907287 10.5739197119436 10.3378742020703 10.0146630044831 6.76778190769433 7.06290851575198 7.8891493730273 6.33807205928622 5.07658928207043 5.06999098835636 7.11123577825995 7.21991315832954 4.76353812225014 7.06440990262956 7.36985777807621 6.96218143029956 7.10642896048915 0.254593863986746 0.250235033504819 0.253514613693372 0.249728943294264 0.252243717865793 0.253801192072665 0.245777074627307 0.24496403005792 0.267710159675655 0.247846926061647 0.258468987196256 0.249261418164883 0.249935960658158 0.24496403005792 0.264523836669269 0.24496403005792 0.265880262877955 0.247912176573466 0.24496403005792 5 5|0 +|/ 18411964 18412838 18412383.375 18408351 18413121 + gene protein_coding_gene TRUE TRUE AT5G45380.1 sodium:solute symporter family protein similar to Os10g0580400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065513.1); similar to Urea transporter (ISS) [Ostreococcus tauri] (GB:CAL57595.1); contains InterPro domain Na+/solute symporter; (InterPro:IPR001734) -0.182988716419923 -1.77930941953276 0.103887525015581 1 1.44023479261791 15.9848087385663 -0.182988716419923 0.106422365377324 AT5G39890_at 2.0635731082995 1.95210302194723 2.10949617002265 2.28879619402881 1.67872706343270 1.74801423245245 1.54905089098765 1.82386840226452 1.94012359389287 1.95910709504331 2.20008251996629 1.72055202938166 1.74544531963707 1.66029792766634 1.5166126612384 2.18853965089564 1.95697973121784 2.24836673809432 2.13116043956816 0.233605356239665 0.230383897067605 0.233727640299887 0.230383897067605 0.240918878253289 0.247700040429674 0.238545872265387 0.230483831191793 0.240081594362771 0.230383897067605 0.234148473926543 0.232960272661001 0.233214796582013 0.234245787757962 0.236231148472467 0.230765247531720 0.240218651257152 0.23893027561871 0.233028299842093 5 5|0 +|/ 15992155 15992719 15992534.333 15991621 15993498 + gene protein_coding_gene TRUE TRUE AT5G39890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15120.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB03364.1); similar to Os01g0185500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042241.1); contains InterPro domain Protein of unknown function DUF1637; (InterPro:IPR012864); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) -0.156118990192670 -1.77809568797718 0.104095471405559 1 1.43857845760880 3.85907360964459 -0.156118990192670 0.0611594512050623 AT5G48540_at 8.74406593475681 9.45091804918368 10.1056676714544 10.4272340023999 9.20778234528303 8.66737319523387 7.42410326840928 7.75937699662965 7.99519787218766 7.43931140848338 8.39821778978424 9.25355585055016 7.90079205125628 8.87427184696822 8.0817646316211 8.97419208128723 7.48616646755981 8.13368120832476 6.99758820413118 0.192742587987834 0.179257688764833 0.187765038001948 0.186679630059337 0.179535079383900 0.214762029471366 0.187551576875768 0.183796980796051 0.197136896504088 0.192773731531926 0.182075693979244 0.179257688764833 0.187863548003957 0.182113206395145 0.180581826477292 0.179257688764833 0.195898113354884 0.191960810175201 0.190194501231503 5 5 - 19686331 19686835 19686625.727 19686190 19687146 - gene protein_coding_gene TRUE TRUE AT5G48540.1 33 kDa secretory protein-related similar to receptor protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G22060.1); similar to 33 kDa secretory protein-like protein [Brassica rapa subsp. pekinensis] (GB:AAN23095.1); similar to Os03g0277600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049721.1); similar to Os03g0277700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049722.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 0.236320549000273 1.77622345534884 0.104416980057604 1 1.43602459615379 16.9059132175120 0.236320549000273 0.173702004764462 AT5G11260_at 3.05977764211186 2.74819869095129 3.32666943962637 3.52942055685434 3.26195936625148 3.23572264736092 3.04328626530967 3.03156922921715 3.09187994140237 2.76685307111271 3.27844386756623 3.16835679426195 2.96305135187014 2.92851047984401 3.03781322502443 3.26176464150622 3.27880698873686 2.91624096267038 2.76169236820998 0.192219175764326 0.190708674247255 0.191202179084144 0.19101637900169 0.185272369433529 0.192821648887729 0.187121808223515 0.189126622523220 0.190718947340906 0.188515085902723 0.191891158226403 0.184843603061372 0.195495402796942 0.197591411463577 0.193571360333318 0.194739532372995 0.193022124988817 0.190586382336843 0.190279499103564 5 5 - 3593589 3594772 3594385.636 3593384 3594993 - gene protein_coding_gene TRUE TRUE AT5G11260.1 HY5 (ELONGATED HYPOCOTYL 5); DNA binding / transcription factor Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Identical to Transcription factor HY5 (Protein LONG HYPOCOL5) (AtbZIP56) (HY5) [Arabidopsis Thaliana] (GB:O24646); similar to HYH (HY5-HOMOLOG), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G17609.2); similar to Transcription factor HY5 (LeHY5) (tHY5) (GB:Q9SM50); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain cAMP response element binding (CREB) protein; (InterPro:IPR001630); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.157558589555821 -1.77617591014636 0.104425156489487 1 1.43595975853196 6.14337481263208 -0.157558589555821 0.0645229649848827 AT5G18630_at 9.183176836 9.13362922085183 9.88086524693214 9.79677013355584 10.4293729781583 10.1241974618334 9.5263635779651 9.49022315650716 9.77544521653297 9.74528487765405 10.3322211861931 9.89456958591332 10.0902746121067 10.1028911953926 9.7671533071721 10.3449924943097 9.83833144289548 10.1778431885468 9.66574538507844 0.127222971547114 0.126447022014509 0.131292961784265 0.129924649249724 0.129586162145117 0.133765898164729 0.127011965867182 0.130192430710054 0.145220864945322 0.134418045766647 0.126447022014509 0.126447022014509 0.133120858524808 0.138739271550308 0.128038984256448 0.126447022014509 0.147069078503851 0.1370186854595 0.131576041375585 5 5|0 +|/ 6204414 6205426 6204935.7 6202611 6205739 + gene protein_coding_gene TRUE TRUE AT5G18630.1|AT5G18630.2|AT5G18630.3 lipase class 3 family protein similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to triacylglycerol lipase [Triticum aestivum] (GB:CAD32696.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)|similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT5G18640.1); similar to Os05g0372400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055362.1); similar to triacylglycerol Lipase [Triticum aestivum] (GB:CAD32695.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) -0.15337071327651 -1.77428187759105 0.104751350484516 1 1.43337756298144 19.5942547196362 -0.15337071327651 0.0557991088594451 AT5G38440_at 1.61614507921489 2.21495732892499 2.09765216555362 2.45125660584886 1.71565932933417 1.75985248546827 1.59288268055401 1.88947211962811 2.42633744962715 1.99952754154846 2.02544865310347 2.15806464478154 1.83962315550424 1.56164763354756 1.87454551039262 2.01654192274377 2.11357362323338 2.07499995553753 2.17450445509989 0.195453636891182 0.195320512280824 0.195320512280824 0.200033583734466 0.204738234535724 0.195730571378308 0.202446785430337 0.204670091802601 0.198430206430830 0.199331512139907 0.202862445727361 0.19981222556868 0.197556462319157 0.195320512280824 0.199342466716366 0.198795333792538 0.200960505072597 0.195320512280824 0.198219442820524 5 5 + 15407463 15407795 15407638.545 15407453 15407854 + gene protein_coding_gene TRUE TRUE AT5G38440.1 self-incompatibility protein-related similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT5G04350.1); contains InterPro domain Plant self-incompatibility S1; (InterPro:IPR010264) -0.200573721388645 -1.77365198384903 0.104860037099549 1 1.43251911399137 3.99632411737287 -0.200573721388645 0.131057410504779 AT5G27890_at 1.78238910444893 1.88302452291947 1.87675768387300 2.29494559314704 1.53038361883906 2.17526219243855 1.42519082501557 1.38317228322574 1.48306836773701 1.24372765789800 1.18972321020071 1.34705227924782 1.60353322074320 2.09705121899362 2.21938320392170 1.47981170060201 2.07270827813187 1.35397641033305 1.39016424685906 0.398566844837235 0.384296079208285 0.384296079208285 0.386058246413627 0.392659409337217 0.392638403651238 0.384296079208285 0.384296079208285 0.388992169398157 0.384296079208285 0.384296079208285 0.384296079208285 0.408151428359291 0.394312357194258 0.384296079208285 0.384296079208285 0.384296079208285 0.39181156327893 0.403251322067563 5 5 + 9905667 9905743 9905703.75 9903644 9905918 + gene protein_coding_gene TRUE TRUE AT5G27890.1 similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G15420.1) 0.203008039345587 1.77248251922156 0.105062097189821 1 1.43092571711823 3.31525324353997 0.203008039345587 0.134342431089317 AT5G02920_at 1.37495582311563 1.55356149176004 1.08459153003803 1.89735566647848 1.37780420401075 1.62960985800793 1.76707221541822 1.51297434665032 2.07448670134482 1.64475951602474 1.57322225112484 1.65540584244219 1.55562514571735 1.81867753021139 1.37898738757491 1.41345894945472 1.45505830291747 2.32591170433418 1.67812955433284 0.212761035552541 0.210219486220023 0.219827698909114 0.220816929637525 0.206807575981362 0.212818020505059 0.214088308953070 0.210466553754654 0.206807575981362 0.210462915602567 0.211824194778145 0.206807575981362 0.206807575981362 0.206807575981362 0.213941733474076 0.215282433851119 0.224950932207956 0.224088387307364 0.215666576944591 5 5 + 681000 681597 681227.1 680539 681775 + gene protein_coding_gene TRUE TRUE AT5G02920.1 ubiquitin-protein ligase similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G02930.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC57736.1); similar to Os07g0550300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059937.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.221105247332568 -1.77117597079183 0.105288261058507 1 1.42914616655231 3.24782496516306 -0.221105247332568 0.156751357462805 AT5G42630_at 1.34566887869503 1.47736727832344 1.71842559318801 1.67655727162121 1.22257612294224 1.19439865548849 1.12164401845386 1.72257270996553 1.82794485868398 1.58545683298379 1.79275425045697 1.62202028012522 1.77241962972266 1.37981897995989 1.30217800890126 1.62085054927007 1.61454196050037 1.89190539468387 1.98871892108939 0.175626172694287 0.173205062458889 0.171961374192981 0.168210831042358 0.172542387848622 0.169828855764989 0.171148947700637 0.170469420444595 0.172221521571779 0.172495912862865 0.177955478235664 0.171130370576125 0.170813342640341 0.171437976028931 0.179729100895783 0.172966589224437 0.167456105052589 0.172168603853728 0.172751572382751 5 5|0 -|/ 17091226 17092715 17091986.333 17091007 17093084 - gene protein_coding_gene TRUE TRUE AT5G42630.1 ATS/KAN4 (ABERRANT TESTA SHAPE); DNA binding / transcription factor Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument. similar to KAN (KANADI), transcription factor [Arabidopsis thaliana] (TAIR:AT5G16560.1); similar to KANADI-like transcription factor FEATHERED [Ipomoea nil] (GB:BAE73187.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.182280508066199 -1.76974819707388 0.105535914805836 1 1.42720225735308 3.14753531739552 -0.182280508066199 0.106819270287796 AT5G04840_at 2.94446587934219 2.70622840127314 2.77058100072961 2.99991560444879 2.66038020310397 2.57571853177027 2.67047902230106 2.63594044946861 3.36908422857564 2.81303198399080 3.69933450212518 3.86327932343292 2.99799221610231 3.57850046381975 3.87657710513751 3.59487416709186 3.49160076358164 3.4666165779723 2.85697489018464 0.207318012867033 0.208902663699925 0.199748454144876 0.197202650121211 0.203444277066957 0.202067247437742 0.212924550034385 0.201438003278922 0.197202650121211 0.20251954681958 0.197202650121211 0.197202650121211 0.202062765728028 0.206768439796181 0.198676243650202 0.197202650121211 0.201779212988885 0.220936396199735 0.197202650121211 5 5 + 1406443 1407592 1407124.889 1405295 1407935 + gene protein_coding_gene TRUE TRUE AT5G04840.1 bZIP protein similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT2G42380.2); similar to Os01g0211800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042375.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE80500.1); similar to Os02g0538900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047055.1); contains domain no description (G3D.1.20.5.170) -0.154550280358419 -1.76959339263841 0.105562798102689 1 1.42699153894117 6.03752726530052 -0.154550280358419 0.0593736322715196 AT5G53800_at 6.15968007073582 6.02974081612587 6.94489777578419 6.89854968157165 7.44834587418631 7.10874690569434 5.4755529092334 5.72423525342685 6.27144515932123 6.41685758273967 6.51104542930578 7.0717640109588 6.98093169899035 7.13109185944316 6.55222431285825 7.09517082367441 6.77804720841374 6.65455076672024 6.31324163376723 0.180430044293453 0.182026948829088 0.183166475965031 0.18868269992119 0.189698263013796 0.193831008456872 0.185382206473719 0.184850044719962 0.190486400616462 0.183570577833571 0.179807814463402 0.187923895599085 0.177258356053163 0.181342204877983 0.178891314216434 0.183056326472622 0.1835182048926 0.182252159311382 0.185356184897255 5 5|0 +|/ 21865955 21866804 21866396.286 21865361 21867337 + gene protein_coding_gene TRUE TRUE AT5G53800.1 similar to DEAD box RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT1G20920.1); similar to hypothetical protein TTHERM_01026350 [Tetrahymena thermophila SB210] (GB:XP_001030734.1); similar to Os04g0530300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053388.1); similar to OSIGBa0155K17.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86384.1) -0.163284270191223 -1.76936885524922 0.105601802260510 1 1.42668591711869 13.0640693553806 -0.163284270191223 0.076654176737845 AT5G58740_at 9.9581502004688 9.96759665285457 10.8128169172456 10.8167723319242 10.7444881368982 10.7844448210823 9.96017907458305 10.0446056916436 9.95697415965765 9.92174001103327 10.7963302427597 10.6252759292146 10.6445388377665 10.6456728561782 10.7004588473220 10.6471052952260 10.4639488643017 10.6610757673786 9.81950840673133 0.068963308415271 0.0667543105971806 0.0676454654136598 0.0683442915459439 0.0691334469940252 0.0743594379464197 0.067432930389281 0.0716675759928258 0.0709592487009604 0.0685720750758831 0.0667543105971806 0.0671004057236261 0.0695794904298592 0.070056520861022 0.0667543105971806 0.0674753841207575 0.0754865203117244 0.0678392498422778 0.0711413123787963 5 5|0 -|/ 23743168 23744540 23743923.875 23743000 23744840 - gene protein_coding_gene TRUE TRUE AT5G58740.1 nuclear movement family protein similar to nuclear movement family protein [Arabidopsis thaliana] (TAIR:AT4G27890.1); similar to Os01g0668000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043813.1); similar to hypothetical protein [Plasmodium berghei strain ANKA] (GB:XP_678068.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain CS; (InterPro:IPR007052) 0.141384487875309 1.76800208350535 0.105839505246073 1 1.42482600049257 20.6598609062505 0.141384487875309 0.0162609431937475 AT5G16480_at 3.99150448074953 4.11487049298567 5.17183757584104 5.2720672177301 4.85847157449775 4.77301506548163 3.93523842243527 3.64827175015652 4.13375664169631 4.40026602305416 5.33341420125441 5.93110622398954 5.44632620454272 5.35378112073529 5.21384503634402 5.83989178551507 5.42128969697185 5.35797578558844 4.96918007268215 0.224592615988667 0.224784360991534 0.224046450867795 0.220072816597247 0.228869958207032 0.228100867696213 0.229505468874951 0.224694639189613 0.232574393442280 0.220261569174204 0.22165327337372 0.226699264158544 0.223907294833645 0.22476451921577 0.222762776480641 0.223959720718547 0.219123909229647 0.221073337123060 0.218985061667813 5 5 - 5381345 5382570 5382100.818 5381116 5382900 - gene protein_coding_gene TRUE TRUE AT5G16480.1 tyrosine specific protein phosphatase family protein similar to phosphoprotein phosphatase [Arabidopsis thaliana] (TAIR:AT3G02800.1); similar to Protein tyrosine phosphatase, catalytic re (GB:ABD28384.1); contains InterPro domain Putative tyrosine phosphatase; (InterPro:IPR004861) 0.154033198425201 1.76734143332536 0.105954576761865 1 1.42392724040334 9.46479524049063 0.154033198425201 0.0586647244640157 AT5G26240_at 7.81493024293478 7.89357252263902 9.0487733422194 8.94838773613598 9.32170977319889 8.84843514366277 8.19948189589833 7.69856969134296 7.36408440532895 7.38217561246556 8.6993418459492 8.51790846455454 8.50870127722553 8.39576133575844 7.93478830455282 8.57682736661465 8.54704502354019 8.19412416561212 7.46834234611652 0.174382836315900 0.168426605780906 0.171620279572455 0.167505388519314 0.170543734856751 0.170748640052414 0.173984109272188 0.177998657812344 0.202536181200553 0.166944061932305 0.175229848341228 0.166768203538384 0.176666024061505 0.178757222628480 0.172597217207713 0.165858622788209 0.178515629116457 0.193697440804967 0.183442583673654 5 0|5 /|+ 9193472 9194321 9193805.778 9189527 9194734 + gene protein_coding_gene TRUE TRUE AT5G26240.1 CLC-D (chloride channel D); anion channel/ voltage-gated chloride channel member of Anion channel protein family Identical to Chloride channel protein CLC-d (AtCLC-d) (CLC-D) [Arabidopsis Thaliana] (GB:P92943;GB:O81491); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to Chloride channel protein CLC-d, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98345.1); similar to putative CLC-d chloride channel protein [Oryza sativa (japonica cultivar-group)] (GB:AAO19370.1); similar to Chloride channel protein CLC-d, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98346.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) 0.192402433340405 1.76703976245784 0.106007159322818 1 1.42351689830959 16.3850723823105 0.192402433340405 0.121282035947812 AT5G66940_at 2.23893546679992 2.11136467989082 2.39849674834220 2.30778954187652 2.08984246891385 1.84721418647899 2.24134342767692 2.42227650351758 1.93708910330619 1.88714375633634 2.21914103327622 1.61953988961711 2.47766524510827 2.06773945990938 1.57700447295544 1.92896468895409 2.31582688364456 2.45240438207575 1.94456225579539 0.19652829167336 0.190982877245752 0.193142604635345 0.197028140640262 0.190926668485788 0.206806209729270 0.193378523498693 0.192351589977235 0.192933504435332 0.203111823466187 0.199445333262585 0.193895257515327 0.194530319504478 0.195287830224063 0.206301805441862 0.197820744144999 0.198548093246647 0.192837406060928 0.197124974950004 5 5 - 26745230 26745772 26745476.455 26745215 26745892 - gene protein_coding_gene TRUE TRUE AT5G66940.1 Dof-type zinc finger domain-containing protein Identical to Hypothetical Dof zinc finger protein DOF5.8 (AtDOF5.8) (DOF5.8) [Arabidopsis Thaliana] (GB:Q9FGD6); similar to OBP1 (OBF BINDING PROTEIN 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G50410.1); similar to DNA binding with one finger 5 protein [Pisum sativum] (GB:BAC81662.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -0.154140292926844 -1.76700451790117 0.106013304149914 1 1.42346895986922 4.20976660898139 -0.154140292926844 0.058967564574741 AT5G51120_at 6.90831387347977 6.85215810107341 7.44144843136859 7.61657113916089 7.20974047730021 7.3853939847063 6.45905458644347 6.9697373788573 6.38198755959975 6.08762669966998 7.41630990552901 7.44046978815825 7.19413293924635 7.51146892995596 7.5993347900478 7.29941933509205 6.81691260364963 6.89463103226916 6.0317243445818 0.208597061487893 0.199751382210538 0.206617459940513 0.208817455128955 0.206096303700711 0.215993588590323 0.199751382210538 0.200446410546443 0.209490017403836 0.209986196342328 0.202564545706927 0.206525738911725 0.200201077710654 0.20715370510055 0.202563799301991 0.221509330475471 0.223674761904983 0.206662226212876 0.210794276074713 5 5|0 +|/ 20797098 20798292 20797864.111 20796906 20798756 + gene protein_coding_gene TRUE TRUE AT5G51120.1 ATPABN1/PABN1 (polyadenylate-binding protein 1); RNA binding Encodes a homolog of the protein PABN1, a polyadenylation factor subunit. similar to polyadenylate-binding protein family protein / PABP family protein [Arabidopsis thaliana] (TAIR:AT5G65260.1); similar to Os02g0757900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048174.1); similar to putative poly(A) binding protein [Oryza sativa (japonica cultivar-group)] (GB:BAD17091.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.176459088508219 -1.76637111699295 0.106123791644067 1 1.42260751173705 13.8246511382708 -0.176459088508219 0.0987280273674743 AT5G42290_at 2.15880119737966 2.16320564436637 2.39188567368053 1.96894689234355 1.77058443193449 2.34008034864678 2.11315528450060 2.01388286694295 2.26696286024421 2.72462370773671 2.47822738169606 2.43191422552128 2.57817019682832 2.33505438879548 2.72589313629476 2.03184909043300 2.15400923220854 2.43000799517296 2.07537227322208 0.190453606110299 0.192936636117242 0.202304309506433 0.201342981275792 0.188152917834584 0.196670782849114 0.188152917834584 0.194303156238695 0.204653981953924 0.190143720507219 0.197241216570020 0.189707798141637 0.192495329992333 0.190904502484974 0.196216758629633 0.190793827651533 0.196420964600763 0.190470283983618 0.198536071680253 5 5 + 16928969 16929236 16929105.636 16928865 16929389 + gene protein_coding_gene TRUE TRUE AT5G42290.1 transcription activator-related similar to Os03g0133100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048873.1) -0.194291451590109 -1.76600653971598 0.106187434196958 1 1.42211174403426 4.4907146189426 -0.194291451590109 0.123958033005016 AT5G58030_at 7.73521070327121 7.5837531016291 8.1904811392334 8.48504586712826 8.74033266318085 8.40364779558245 8.00157763965843 7.67558128809455 6.83064872418468 6.69722564176558 8.11765191941201 8.39768725249171 7.64626077854167 8.18045943696476 8.33117967315954 7.97267312291063 8.04538140834884 8.06102577893414 6.07352599091488 0.171764752470231 0.163203373694953 0.171262929950468 0.166453680669405 0.166441518626975 0.164552971407651 0.164058172116137 0.168684546132026 0.184253184366274 0.169967428723295 0.164799297754218 0.169026698727009 0.164666553698673 0.172458183197694 0.174301838354656 0.168298992209138 0.171213856494274 0.169768935841247 0.183291776290978 5 5|0 -|/ 23504388 23505666 23504937.8 23504003 23505846 - gene protein_coding_gene TRUE TRUE AT5G58030.1 transport protein particle (TRAPP) component Bet3 family protein similar to SPP30 [Solanum chacoense] (GB:AAD34459.1); similar to Os01g0708600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044028.1); contains InterPro domain Transport protein particle (TRAPP) component, Bet3; (InterPro:IPR007194) 0.176762905896718 1.76554537225918 0.106267987681890 1 1.42148470279838 15.4158737948725 0.176762905896718 0.0993125879896973 AT5G60320_at 0.753054358797759 0.759678702137962 1.17000537933638 1.01537072295482 1.11308138778679 1.02550203875171 0.964683289031034 1.12281450085604 0.763460341444139 0.477745337883829 0.753376535947915 1.00154193454580 0.563437919314208 1.5025641264913 0.852905748695913 1.13834665860164 0.939597554243893 0.902911107090581 0.921310023943539 0.209602511007646 0.206465560840408 0.211763011899295 0.204758030558547 0.20646572825261 0.209191039318957 0.204758030558547 0.212367202121714 0.207039040014584 0.207015592348465 0.214027837393869 0.215940589695539 0.224676613873674 0.211746977738275 0.218825754674573 0.222148642841941 0.233406212300832 0.218599306870639 0.216473332615345 5 5 + 24289536 24290004 24289793 24288034 24290061 + gene protein_coding_gene TRUE TRUE AT5G60320.1 lectin protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45410.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45330.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45440.1); similar to Os04g0531500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053397.1); similar to OSIGBa0125M19.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86404.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.147018017338864 1.76526997920790 0.106316117852122 1 1.42111029512052 1.82936068039335 0.147018017338864 0.0411824221139605 AT5G08415_at 5.92933142648671 6.3722470721951 6.6858592661289 6.60943032642777 7.21846283615684 6.74847099503328 7.44084641806562 7.51052915820004 5.70971303438607 6.15368865655653 8.02786328264766 8.23206159799937 7.53491845327881 7.98659368864286 8.21334696310866 7.07278875942729 7.24605096800422 8.02816738553492 6.41033713727811 0.219818391060555 0.201898178268617 0.199885543555652 0.203216522217135 0.206668137959130 0.208870100325548 0.203944627977050 0.199885543555652 0.227315929042988 0.211507056451443 0.201937166250475 0.199885543555652 0.205278770092679 0.207730810597953 0.207498103199606 0.199885543555652 0.211962317460336 0.19992210068492 0.211047061659674 5 5|0 -|/ 2710984 2712097 2711683.125 2710818 2713133 - gene protein_coding_gene TRUE TRUE AT5G08415.1 lipoic acid synthase family protein similar to LIP1 (Lipoic acid synthase 1), lipoic acid synthase [Arabidopsis thaliana] (TAIR:AT2G20860.1); similar to lipoic acid synthetase [Rattus norve (GB:NP_001012037.1); similar to Os05g0511500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056016.1); similar to Os01g0769100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044370.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Lipoate synthase; (InterPro:IPR003698); contains InterPro domain Elongator protein 3/MiaB/NifB; (InterPro:IPR006638) -0.186216042695948 -1.76447094903424 0.106455875577777 1 1.42002414897676 13.7563822690388 -0.186216042695948 0.113184056533226 AT5G60620_at 8.93904001073002 8.86574611033645 9.54088900652678 9.70470479627274 9.91683276973783 9.7112529907707 8.45133331790452 8.48711582221495 8.87876120310278 8.65262791004988 9.5896767748155 9.47581868514412 9.57991818564398 9.33414959335324 9.40617202090913 9.5436500838501 9.5344914965807 9.47911202906084 8.62096380825983 0.126926957749064 0.132451394085557 0.134991920294706 0.130057663993196 0.129154450943930 0.131907120707517 0.129267362255053 0.1299374026302 0.128584008173296 0.126489542237189 0.129845966206065 0.123076957134241 0.124100432340976 0.127750741095251 0.130738031487412 0.123248011943702 0.123544181887334 0.127894976127529 0.129123144616875 5 5|0 +|/ 24385541 24386832 24386198.8 24384424 24387016 + gene protein_coding_gene TRUE TRUE AT5G60620.1 phospholipid/glycerol acyltransferase family protein similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G80950.1); similar to Phospholipid/glycerol acyltransferase [Medicago truncatula] (GB:ABE86597.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) 0.149181628246674 1.76393575250685 0.106549579602711 1 1.41929677878725 18.3072766442987 0.149181628246674 0.0476296744837645 AT5G06660_at 7.38329359659237 7.50353400150666 7.80204768159955 7.82943467839258 8.6463890237592 7.9205816650053 7.63001885108898 7.41270192963554 7.05590561696563 6.06766066028652 7.3650824055796 7.82134899302394 7.70092209924526 7.43918854960592 7.77089558104419 7.31578346722248 7.47995001553055 7.46079155115884 6.44788402010413 0.216307598372806 0.204837556381722 0.215405420779929 0.208068923587890 0.208982319397931 0.207310811987571 0.209637523024697 0.204123033305779 0.211213111987150 0.214217182985224 0.206677048551752 0.204142697779202 0.204478871260468 0.209560285127938 0.210773451892254 0.202154003852193 0.214371041422378 0.203164112368388 0.206031307606073 5 5 + 2046884 2047422 2047140.909 2046811 2047795 + gene protein_coding_gene TRUE TRUE AT5G06660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12030.1); similar to fiber protein Fb27 [Gossypium barbadense] (GB:AAQ84318.1); contains InterPro domain Protein of unknown function DUF841, eukaryotic; (InterPro:IPR008559) -0.200851316033472 -1.76389039403758 0.106557524557449 1 1.41923513851952 14.8000312277409 -0.200851316033472 0.132839128142313 AT5G06490_at 0.606531150622684 0.399175708338243 0.840797338941494 0.550520585992313 0.907151467197981 0.627558940320392 0.886157415081282 0.707229013446553 1.12952734754721 1.20099208592507 1.10909766867094 0.452597485483692 0.583158213103586 0.672183179034055 0.635767477970215 0.937739925809694 1.21398459808362 0.987252239304702 1.04290792844624 0.169027223040707 0.176771328579197 0.173924209750027 0.176142644074139 0.173984818100218 0.174002693217862 0.170707200152822 0.185492276486404 0.168941567667705 0.170683222212075 0.172635838067793 0.173136612304904 0.178974622746096 0.172653440671765 0.177659525749041 0.176329001543859 0.169433977240131 0.177720063175238 0.172946585225756 5 5 - 1978001 1978543 1978305.455 1977997 1978590 - gene protein_coding_gene TRUE TRUE AT5G06490.1 zinc finger (C3HC4-type RING finger) family protein Identical to Putative RING-H2 finger protein ATL5D (ATL5D) [Arabidopsis Thaliana] (GB:Q9FG21); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G35910.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE84207.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.167067641724141 -1.76268988855923 0.106767999697230 1 1.41760399275613 1.66486439536199 -0.167067641724141 0.084326507786946 AT5G47080_at 7.41038301854617 7.54596026544802 8.81166109769083 8.61638233088529 9.4227627158261 8.94054154855512 8.18196375379183 7.5582323930654 7.25433648587602 6.8631876389361 8.2669356560187 7.80311050175359 8.17895101504934 8.07801231839181 7.82735671628655 8.27410032163584 8.09490557609142 7.96383336228501 7.0778053497453 0.160326085331235 0.168101943030460 0.162175492549591 0.162794105741861 0.158111581608051 0.163161922064573 0.161623184321486 0.168740113873411 0.169772198542878 0.180442080242386 0.158587668431685 0.164310230028570 0.163502495529629 0.178863076407620 0.158609257234203 0.162316757598351 0.171798859907835 0.164161749706318 0.177939184914085 5 5 - 19142247 19143139 19142697.364 19141839 19143838 - gene protein_coding_gene TRUE TRUE AT5G47080.1|AT5G47080.2|AT5G47080.3 CKB1 (casein kinase II beta chain 1); protein kinase CK2 regulator Regulatory subunit beta of casein kinase II. purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). Identical to Casein kinase II subunit beta (CK II beta) (CKB1) [Arabidopsis Thaliana] (GB:P40228); similar to CKB2 (casein kinase II beta chain 2), protein kinase CK2 regulator [Arabidopsis thaliana] (TAIR:AT4G17640.1); similar to Casein kinase II beta chain, putative [Brassica oleracea] (GB:ABD65048.1); contains InterPro domain Casein kinase II, regulatory subunit; (InterPro:IPR000704) 0.208200996553986 1.76137786673564 0.106998457481910 1 1.41582197021140 15.8739911446218 0.208200996553986 0.142504295333149 AT5G28130_at 0.942739252093144 0.910343656528382 1.44653870031124 1.29568953899430 0.872485707576934 1.25076324280820 1.12911451108835 0.774938487638053 1.24292697904190 0.280106919273217 1.04935050700553 0.741015268606561 0.81136475848949 1.44236029880389 1.06542369234786 0.825522310233657 1.99207588885533 1.07413926722011 1.23674674578457 0.264763640013149 0.259302291041441 0.277820039701733 0.272115238705417 0.259302291041441 0.264098779304153 0.266986623354449 0.264063148935140 0.268373586217595 0.285892900226263 0.259302291041441 0.262128518348858 0.266803143959127 0.259302291041441 0.259302291041441 0.260537645653220 0.275835876332472 0.269384662864789 0.270162554467257 5 5 - 10114547 10114753 10114659.714 10114437 10114784 - gene protein_coding_gene TRUE TRUE AT5G28130.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04155.1) 0.172325648194149 1.75835757836579 0.107530689744072 1 1.41172228981301 2.10036832728576 0.172325648194149 0.0935679367337671 AT5G02520_at 1.8689091596983 2.04275926629039 2.12660271759067 2.45736881945111 1.69440526865852 1.51429939439772 2.06890537876161 2.04945875836994 2.01078311216820 2.00878004059329 2.27540779131115 2.26733226113745 2.15000053775636 1.97464450929343 2.18971543798250 2.05890534872462 2.00625905943047 2.30939767297130 2.16517416900427 0.174622543155027 0.176501025733226 0.178835005517749 0.179777832035049 0.184519172653627 0.178965725242957 0.178882944752944 0.178813154496838 0.175591545600898 0.177803191654736 0.175387641955844 0.172235098565671 0.175769964374062 0.178407661567019 0.171324156296559 0.176391119291664 0.176572896431398 0.181146411332734 0.184912125526351 5 5|0 +|/ 562983 563672 563304 562392 564140 + gene protein_coding_gene TRUE TRUE AT5G02520.1 unknown protein -0.159401588040975 -1.75523450345696 0.108083558431021 1 1.40748684566389 4.08560706269287 -0.159401588040975 0.0718638263585468 AT5G20050_at 7.86182738743487 7.92359761903169 8.39301288354922 8.44066770411087 8.74966697871869 8.92440293527118 7.6809599528717 7.82135076524068 8.18221428037953 7.84441472981525 8.7172415709628 8.76193206770884 8.62259173723607 8.96709316306104 8.33121942818491 8.64598400415236 8.11773824650156 8.68896569510032 7.82361976183093 0.133687211041684 0.129672800695149 0.152225295766164 0.136357883350342 0.135426757198588 0.142861606085678 0.147712651806425 0.127371214315329 0.132716418128149 0.138602850335264 0.1304164355823 0.131643056465020 0.135765052474844 0.133924188876362 0.127371214315329 0.131554405036769 0.140914630223083 0.131857627783150 0.147148892340131 5 5 + 6775145 6775704 6775445.545 6774304 6775847 + gene protein_coding_gene TRUE TRUE AT5G20050.1 protein kinase family protein similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to Protein kinase [Medicago truncatula] (GB:ABE92612.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.146066381365816 -1.75427682015328 0.108253609712310 1 1.40618882434234 16.5027751098396 -0.146066381365816 0.0410722479759549 AT5G55990_at 9.3657984800505 9.67026312256053 10.0477437747110 9.8806269473635 10.3799188198611 10.0534366578253 9.18589668171957 9.44294018403473 8.81613416822809 8.93053897831429 10.2253992204273 10.0618568064713 10.271817715508 10.0407588684903 9.79224932248119 9.88417385941916 9.42834199923977 9.85371911221782 8.83114812428643 0.132798799972239 0.137618145984652 0.132890209890680 0.133483440904013 0.135328189576974 0.134526775241523 0.138992333084115 0.135122859255536 0.165174135372158 0.140868814054786 0.132798799972239 0.133694575708543 0.132798799972239 0.145357486876386 0.137668586343736 0.132798799972239 0.149801707579805 0.141281068030201 0.143215693910852 5 5|0 +|/ 22689501 22690768 22690284.7 22688678 22691081 + gene protein_coding_gene TRUE TRUE AT5G55990.1 CBL2 (calcineurin B-like protein 2); calcium ion binding Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family. Identical to Calcineurin B-like protein 2 (SOS3-like calcium-binding protein 1) (CBL2) [Arabidopsis Thaliana] (GB:Q8LAS7;GB:O81446); similar to ATCBL3 (CALCINEURIN B-LIKE 3) [Arabidopsis thaliana] (TAIR:AT4G26570.1); similar to calcineurin B-like protein 3 [Gossypium hirsutum] (GB:AAX20387.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Recoverin; (InterPro:IPR001125) 0.171940123091240 1.75344311575546 0.108401844007210 1 1.40505913487903 19.1553597685032 0.171940123091240 0.0937197206992616 AT5G14770_at 1.87313855302207 1.78152140072083 2.89917857993398 2.47755295278435 2.60953161273545 2.48048803376546 2.18511877646868 2.11311357022496 1.88520653752907 2.00586887338021 2.10662258894185 1.78570204043037 2.01494839474626 1.83517777038947 2.44190417969521 2.54115524589974 2.46181942748235 2.17359082404465 2.27489262071071 0.204543834790913 0.194235038964425 0.19438912375138 0.197648379791157 0.199828209109397 0.202953321944869 0.194296856674664 0.194558458693837 0.204786682777631 0.195760778587822 0.196244249908860 0.197775548134756 0.199599559347434 0.199409255155832 0.201872815852075 0.199982685074454 0.195690527374414 0.196893699581477 0.202451242844479 5 5 - 4772884 4773450 4773196.636 4772884 4775700 - gene protein_coding_gene TRUE TRUE AT5G14770.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22929.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.162887573536351 1.75139120106896 0.108767462131987 1 1.40227990766677 4.41517430303717 0.162887573536351 0.0789248550053442 AT5G10090_at 1.44696620400987 1.03397518890162 1.29943337625656 1.3533204085271 1.42544935435532 1.70202908612085 1.41850781426013 1.38703425614597 1.37356602922724 1.03718277485048 1.39827706712845 1.49575142149875 1.46488112276621 1.57644488362260 1.82190749355500 1.4865214538102 1.98663034490676 1.71685974384070 1.24030179233327 0.208938107836834 0.219205748325627 0.211112820659229 0.213850987781293 0.210053749942208 0.212628563457174 0.209886831750882 0.208988045096841 0.215532810521214 0.211798821822725 0.218712785328211 0.215047562799558 0.217037751424305 0.216101437914448 0.21179141277284 0.208938107836834 0.215867457245558 0.208938107836834 0.214760669242861 5 5|0 -|/ 3153736 3154452 3154145.4 3153723 3155746 - gene protein_coding_gene TRUE TRUE AT5G10090.1 tetratricopeptide repeat (TPR)-containing protein similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G65160.1); similar to 52O08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67569.1); similar to 4D11_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67524.1); similar to 80A08_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67592.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.16739233992854 1.75127159978372 0.108788807566041 1 1.40211796426543 2.80105248950288 0.16739233992854 0.0866919793129796 AT5G44790_at 8.41654953837315 8.34987790057814 9.40655140582138 9.33109744227087 9.65553394652246 9.016370579813 7.86919170096231 7.61085780585092 7.8405234974847 7.96644215952277 8.82475638563479 8.63608829900348 8.62090284024602 8.74274908777556 8.73804362903647 8.97804817532637 8.90251737737142 8.63347385775946 8.18815463581968 0.163300994775469 0.161297422128177 0.160573369049824 0.162503016602162 0.168232415524578 0.179155622597336 0.161015535671673 0.1719807896906 0.179568111947211 0.165893287173467 0.160899165860474 0.163939620437230 0.160467614123454 0.166739937772698 0.158523846039763 0.162001783019965 0.170341147979635 0.170622146586288 0.165385002434084 5 5 - 18093091 18093804 18093321.455 18092837 18097215 - gene protein_coding_gene TRUE TRUE AT5G44790.1 RAN1 (RESPONSIVE-TO-ANTAGONIST1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism ATP dependent copper transporter vital for ethylene response pathway Identical to Copper-transporting ATPase RAN1 (EC 3.6.3.4) (Responsive-to-antagonist 1) (RAN1) [Arabidopsis Thaliana] (GB:Q9S7J8); similar to HMA5 (HEAVY METAL ATPASE 5), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G63440.1); similar to copper-transporting P-type ATPase [Brassica napus] (GB:AAL02122.1); similar to putative ATP dependent copper transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD45393.1); similar to putative copper-exporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD25508.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P type cation/copper-transporter; (InterPro:IPR006403); contains InterPro domain Heavy metal translocating P-type ATPase; (InterPro:IPR006416); contains InterPro domain Copper ion-binding; (InterPro:IPR006122); contains InterPro domain Copper-transporting ATPase 1; (InterPro:IPR001877); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.18996887236558 1.74950723435937 0.109104137818566 1 1.39972962192836 17.0859767337548 0.18996887236558 0.120568889302771 AT5G15760_at 1.8959135246078 2.48289084716726 2.21611833756641 2.40067554618394 3.11287331373194 2.51491544189566 2.46156919533764 3.08184415791418 2.43366298097620 2.19972094250014 3.05521513318553 3.28784068814736 3.51677285766584 3.56952510904983 3.43502292419576 3.02957061708222 2.51315772195124 2.97257711826095 1.85863826018892 0.261177305234917 0.258313438808503 0.270152529673947 0.268052921896566 0.267593970079362 0.27515071003967 0.260324731451646 0.258264077012881 0.265538119847230 0.263012453050831 0.257776503746925 0.258122310403865 0.259792751475594 0.260679168214319 0.266293475356396 0.258877929391479 0.273307204957157 0.259413783999893 0.268653647388078 5 5|0 +|/ 5143134 5143841 5143395.8 5143056 5144056 + gene protein_coding_gene TRUE TRUE AT5G15760.1 plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative Identical to Plastid-specific 30S ribosomal protein 3-2, chloroplast precursor (PSRP-3 2) [Arabidopsis Thaliana] (GB:Q9LFV0); similar to plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative [Arabidopsis thaliana] (TAIR:AT1G68590.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96848.1); contains InterPro domain Plastid and cyanobacterial ribosomal protein PSRP-3/Ycf65; (InterPro:IPR006924) 0.240971162739322 1.74886502618296 0.109219119607295 1 1.39886059909032 5.18908387842432 0.240971162739322 0.183217279370653 AT5G10040_at 1.76447774966468 2.01205092819708 1.73540797867800 2.38339514090214 1.92911795752484 1.68354690950851 1.85716756856916 1.96084207984888 2.03622883545182 2.16196925992707 1.83267427494353 1.83435839434603 2.21795316266989 2.35487118991903 1.66953922614817 1.93663959164858 2.25248447456146 2.20463459855791 2.17985710654484 0.161743699057579 0.157404181660755 0.162971046514779 0.155626063751343 0.155233931668432 0.162059738554292 0.162665372986546 0.155649300767745 0.166399896932775 0.160889895995908 0.156542050879589 0.155233931668432 0.15527645787089 0.155233931668432 0.161450356456594 0.156047071623352 0.164199926726615 0.157205776282075 0.161087801242367 5 5 + 3143726 3143962 3143867.091 3143724 3144158 + gene protein_coding_gene TRUE TRUE AT5G10040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65207.1); similar to 80A08_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67588.1) -0.195467909669748 -1.74503100468066 0.109907853094379 1 1.39367588157137 3.99770717148195 -0.195467909669748 0.128601086293990 AT5G63990_at 3.91745279441959 4.40329400475387 4.04513696939654 4.13316463008969 3.43232253142093 3.52905343667363 2.39510957172502 2.75771306481527 2.31677069765406 2.42085999555546 3.35197221368181 3.76818518291189 2.65740028032188 3.09859349163086 3.8622168577542 3.31234786331955 3.08997007452475 3.59666711901715 2.44044258822231 0.231977593734389 0.217800319198780 0.227873885021675 0.219392301532565 0.218578045283491 0.232406214864215 0.216581709005125 0.224981598023451 0.232671070889877 0.222431528826598 0.216581709005125 0.220552635957524 0.216654211640325 0.227846943008843 0.231854344069061 0.223641055686986 0.224300681148024 0.218146121758009 0.222314291560181 5 5|0 +|/ 25632128 25632938 25632477.9 25630484 25633106 + gene protein_coding_gene TRUE TRUE AT5G63990.1|AT5G63990.2 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative Identical to Probable SAL3 phosphatase (3'(2'),5'-bisphosphate nucleotidase 3) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase 3) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 3) (IPPase 3) (SAL3) [Arabidopsis Thaliana] (GB:Q8GY63;GB:Q8L8N7;GB:Q9LVN5); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239)|Identical to Probable SAL3 phosphatase (3'(2'),5'-bisphosphate nucleotidase 3) (EC 3.1.3.7) (3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 3) (DPNPase 3) (Inositol-1,4-bisphosphate 1-phosphatase 3) (EC 3.1.3.57) (Inositol polyphosphate 1-phosphatase 3) (IPPase 3) (SAL3) [Arabidopsis Thaliana] (GB:Q8GY63;GB:Q8L8N7;GB:Q9LVN5); similar to SAL2, 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G64000.1); similar to Os12g0183300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066326.1); similar to Os12g0183200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066325.1); similar to diphosphonucleotide phosphatase 1 [Zea mays] (GB:AAK57915.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.179968547408186 1.74393424746233 0.110105593335556 1 1.39219381931160 6.44408599001475 0.179968547408186 0.107325805903052 AT5G67040_at 2.37300405286738 1.86427147832114 2.34428110615912 2.52809741974368 2.1304028821977 1.95735953823666 2.54307858573609 1.95245645396637 2.83507668291699 2.31533099538205 2.45743743311513 2.52293173132081 2.56160237295933 2.4893662085456 2.63046993238576 2.22780456387239 2.73306085670983 2.43355940987413 2.31836418074736 0.203007237939707 0.20184596781799 0.201050316689536 0.198774688841209 0.201307149381528 0.204076028091017 0.209338585380821 0.208200996626635 0.201082862112525 0.198774688841209 0.201790701123342 0.201500018253224 0.20531277150061 0.20264616239528 0.198774688841209 0.198774688841209 0.214887537175431 0.201850490573163 0.198774688841209 5 5|0 -|/ 26775139 26775639 26775357.8 26775122 26775701 - gene protein_coding_gene TRUE TRUE AT5G67040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55440.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) -0.205536038960196 -1.74358400051282 0.110168809008620 1 1.39172062691977 4.70992878129352 -0.205536038960196 0.141796705324981 AT5G01830_at 2.85416295124615 2.82857287774895 3.00590282044634 2.62867288420941 2.65767092610630 2.65489206520258 2.35367383272450 2.35642152949842 2.93900406383889 2.74663241946574 3.70251892926562 2.83358435772842 3.12223188615151 2.95545619994435 3.13760936183051 2.77550109876167 3.18195012298838 2.86264089494957 2.67709074685706 0.176882399640486 0.17121189909145 0.177522039793961 0.177538892884778 0.179227905296632 0.173681627017384 0.176477646258541 0.175392495252778 0.180683990440495 0.175636374259934 0.175875730516856 0.177187832078252 0.175112938295044 0.174020214963792 0.175762798573733 0.174168080961631 0.175230804346259 0.188592921332149 0.179540111403359 5 5 + 322469 322956 322709.909 320692 323166 + gene protein_coding_gene TRUE TRUE AT5G01830.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein similar to PUB17 (PLANT U-BOX17), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G29340.1); similar to arm repeat protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72657.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) -0.155098030693292 -1.74348121931204 0.110187366100773 1 1.39158177621746 5.5970024108177 -0.155098030693292 0.0654349292802216 AT5G15010_at 2.57307316686789 3.01940320977932 2.92510959309695 3.68482317843211 3.78790453545963 3.27246064266061 2.71912177837551 2.79037684775541 2.38828459375025 2.61869306752812 3.26415550288877 3.76478728430377 3.2700563840277 3.42607050128197 3.1387774327429 3.26764510795884 3.20101210238767 2.74817085804807 2.68113130115679 0.171821000760509 0.174410454105401 0.175390253909509 0.174229766173612 0.176599285698792 0.175116233228629 0.175129250397379 0.178395679177496 0.171766316773100 0.183615657368756 0.175641828650657 0.171820202509500 0.180467404475482 0.178929613082881 0.173746583311147 0.170897767250962 0.182949489677277 0.180363773203292 0.174221295528236 5 5 + 4858374 4858931 4858607.909 4857262 4858962 + gene protein_coding_gene TRUE TRUE AT5G15010.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G80880.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82704.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.234803447999704 1.74286563997484 0.110298567822363 1 1.39075025674788 6.0079278111451 0.234803447999704 0.177086164442337 AT5G59420_at 9.89404821555635 10.018288726952 10.851484659971 10.7526404106896 10.8111878557644 10.8727438838230 9.51938930750424 9.6605830616844 9.70610484241321 9.42481717762892 10.1129344406384 9.94515810782286 10.1586492511392 10.1009660328669 9.83711803894743 10.1224944263175 10.1625934758789 10.1208593268233 9.39013030605624 0.0827295380494071 0.0839175591910776 0.0832221547504973 0.0856692080287628 0.0845434281390489 0.0845539652362562 0.0842597941684067 0.08166453696201 0.0897529016520111 0.0862517197285156 0.0811111826392892 0.0840387170215651 0.0850569248602825 0.0827897610520669 0.079734454161736 0.0815449740549777 0.0889274585952596 0.0837522767174079 0.086952289756525 5 0|5 /|+ 23980971 23981762 23981337.3 23978801 23982050 + gene protein_coding_gene TRUE TRUE AT5G59420.1 oxysterol-binding family protein similar to UNE18 (unfertilized embryo sac 18), oxysterol binding [Arabidopsis thaliana] (TAIR:AT5G02100.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT3G09300.1); similar to Os03g0274000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049701.1); similar to oxysterol-binding protein [Solanum tuberosum] (GB:AAR25799.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain C2; (InterPro:IPR000008) 0.144174563435757 1.74211144407609 0.110434948387154 1 1.38973170107868 20.0861028050367 0.144174563435757 0.0382801888500385 AT5G39340_at 7.88133134546077 7.63297686857811 8.20947360352574 8.29572232308297 8.7070410844209 8.24456977220845 7.8907571257219 7.76667201854131 7.54041466140062 7.44584814815344 8.72755053084416 8.65802351188313 8.28991401670388 8.22948724506897 8.43329239245944 8.7333837876801 8.2654563695913 8.19327478256476 7.60810284431044 0.140946023329595 0.134345738759948 0.139085176776346 0.139372809598343 0.142177494375666 0.136915253589913 0.139989538221817 0.144190982197353 0.149538897765004 0.150316325724512 0.141932299502208 0.140850205134318 0.132599576714584 0.138451459743279 0.139773109868932 0.133177477468392 0.133811811163476 0.137057862750169 0.138468379571933 5 5|0 +|/ 15766175 15767443 15766930.778 15766079 15767735 + gene protein_coding_gene TRUE TRUE AT5G39340.1 AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase Encodes AHP3, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs) involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (APH2), AT5G39340 (APH3), AT3G16360 (APH4), AT1G03430 (APH5) and AT1G80100 (APH6). Identical to Histidine-containing phosphotransfer protein 3 (AHP3) [Arabidopsis Thaliana] (GB:Q9SAZ5;GB:Q9ZWM4); similar to AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2), histidine phosphotransfer kinase/ signal transducer [Arabidopsis thaliana] (TAIR:AT3G29350.1); similar to putative histidine-containing phosphotransfer protein 3 [Populus x canadensis] (GB:CAH56501.1); contains InterPro domain Hpt; (InterPro:IPR008207) -0.171291759726371 -1.74160282435265 0.110527007722103 1 1.38904492873497 16.0649445414697 -0.171291759726371 0.0945321482319453 AT5G51470_at 1.26540402820527 1.52152060963899 1.64851642462115 2.08453096304690 1.81702970670835 1.58888396006700 0.73743655074157 1.13119349672797 1.19975606754797 0.924765164908124 0.613570277356128 0.825562021012571 1.67138252298744 1.09957934490095 0.673768249215292 1.36154508345655 0.840343667603121 1.26052139073303 1.23975366689981 0.22159192600996 0.221911525378004 0.230216240203395 0.227155750402045 0.223200116964838 0.222368692198673 0.236021965412616 0.223553347966273 0.22159192600996 0.224269805809643 0.226918842514823 0.22159192600996 0.235115904362851 0.239372284666166 0.224992173927477 0.22159192600996 0.236853630100576 0.221664727613176 0.228387976582676 5 0|5 /|+ 20926179 20926540 20926385.111 20924513 20926566 + gene protein_coding_gene TRUE TRUE AT5G51470.1 auxin-responsive GH3 family protein similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G48660.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT1G23160.1); similar to PBS3 (AVRPPHB SUSCEPTIBLE 3) [Arabidopsis thaliana] (TAIR:AT5G13320.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) 0.186884551559112 1.74009123971612 0.110801011799242 1 1.38700449584483 2.55666898552470 0.186884551559112 0.117727981897431 AT5G22580_at 9.8369345798939 9.89023772883276 8.24815365892488 8.2289101609208 8.609689288217 8.04898829540157 8.59111650876158 8.73439910064745 7.21731705717341 8.86533334309854 11.8899512050759 12.4667920579 11.5950397818981 11.6786281291952 11.7611660568736 11.7772371023248 10.0218300681869 11.9934364579714 10.5909192712132 0.128763372909405 0.133321300913186 0.134786977818621 0.132196070590619 0.135773333394408 0.151693367343113 0.134624589458714 0.133077376809927 0.158711586144634 0.138123310030021 0.134719407528613 0.134602168152095 0.135011680812507 0.142886212690609 0.134594622176432 0.134607119640917 0.146428436689296 0.137216874802838 0.132750367843584 5 5 + 7502724 7503116 7502979.364 7502677 7503452 + gene protein_coding_gene TRUE TRUE AT5G22580.1 Identical to Protein At5g22580 [Arabidopsis Thaliana] (GB:Q9FK81); similar to stable protein 1-related [Arabidopsis thaliana] (TAIR:AT3G17210.1); similar to hypothetical protein [Cucumis melo] (GB:BAD93607.1); contains InterPro domain Stress responsive alpha-beta barrel; (InterPro:IPR013097); contains InterPro domain Dimeric alpha-beta barrel; (InterPro:IPR011008) 0.174944532348455 1.73877398823768 0.111040289848103 1 1.38522713112823 19.0431536641616 0.174944532348455 0.100629024083818 AT5G42860_at 1.96922902471266 2.24647441341228 1.69081866301262 1.83641039560184 1.12353591602989 1.09298163781660 1.74164971739393 2.16502014277265 2.76141346867209 2.66633929648134 4.80089288809287 6.50538116092922 3.74514174941343 4.61099258201720 4.92516885734283 3.85418268311251 2.91170857443049 5.33846262317175 3.42851112026048 0.280713796751178 0.281449571908055 0.284268360324338 0.281073635444242 0.310675482804006 0.291165632855453 0.292375532749147 0.289328320795212 0.280664035467419 0.280664035467419 0.288537289666497 0.297567080965793 0.280664035467419 0.287850411314534 0.287448295905426 0.285989725173499 0.283185161998007 0.294463981569198 0.280664035467419 5 5 - 17200572 17201691 17201076.091 17200294 17202144 - gene protein_coding_gene TRUE TRUE AT5G42860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45688.1); similar to H0814G11.12 [Oryza sativa (indica cultivar-group)] (GB:CAJ86345.1); similar to CAA30379.1 protein [Oryza sativa] (GB:CAB53482.1) 0.168981283233019 1.73874400003689 0.111045742623220 1 1.38518667619602 5.50255466465327 0.168981283233019 0.0912833479345582 AT5G45020_at 4.35022752570510 3.94860362575794 4.12033882755156 4.21526679318371 5.4156809455049 4.97294339062138 4.01295848241493 3.44858496207052 4.53274006428868 4.59960890530338 5.298787568095 5.77704780931698 4.91608382016208 5.46288462427327 5.66465574799386 5.01386474679887 5.04369222180786 5.29596424060483 5.00327404840289 0.218048499910808 0.205404367133190 0.207607657721200 0.20254710364161 0.204889738751698 0.205315563134421 0.20254710364161 0.206268144541531 0.206875786354185 0.206980738240710 0.206293545117146 0.208855217836733 0.209302858820263 0.203800387965280 0.208002302838443 0.20254710364161 0.204314489117524 0.211011507407562 0.2082293099037 5 5|0 +|/ 18187061 18187688 18187414.3 18185909 18187878 + gene protein_coding_gene TRUE TRUE AT5G45020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABC75353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) -0.205987776551378 -1.73790494837639 0.111198406118392 1 1.38405491779237 9.32107403745788 -0.205987776551378 0.143212232508052 AT5G06260_at 8.75892632921396 8.8497683578993 9.51991038003757 9.62762824468521 9.88936557019326 9.52218719491732 8.80811294084265 8.55630082272988 8.2244630328893 8.45920434490712 9.3373966093125 9.38605239115896 9.27677496795077 9.25485841644757 9.1154984787398 9.46183437787647 9.33146327266599 9.42948214405012 8.367208074352 0.175199964060572 0.171449102291016 0.179799220863013 0.166897030621996 0.173654495534223 0.178354723471721 0.165632489117042 0.182272962723605 0.182358942950590 0.180172741586211 0.169986384812168 0.167088770874050 0.164184288339343 0.177860112608283 0.172401534071187 0.166525351918518 0.164184288339343 0.175912966074673 0.184862982148254 5 5 - 1902771 1903515 1903147.2 1902600 1905102 - gene protein_coding_gene TRUE TRUE AT5G06260.1 nucleolar protein-related similar to calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G34070.1); similar to PREDICTED: similar to CG5149-PA [Canis familiaris] (GB:XP_546801.2); similar to Os12g0157200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066200.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain TLDc; (InterPro:IPR006571) 0.162683980659892 1.73776955345903 0.111223058675413 1 1.38387231621805 18.0287559298939 0.162683980659892 0.0808157339895622 AT5G09450_at 6.8841048186958 6.85616844121966 7.23241315315418 7.65210276970049 7.45188403331394 7.39373486475713 6.73998982724678 7.04221850935106 5.41639505325097 5.52742258421128 6.73640990663635 6.59166818309778 6.68628983026132 6.78259313419227 6.74648292942355 6.30538510629155 6.70740383171218 6.74278923821365 5.43460871391877 0.179175960353458 0.177720956068636 0.180653264852981 0.182635850236862 0.176355498115441 0.172004987659903 0.179751066792609 0.184621461171873 0.20506312491722 0.176170117373380 0.183227001846664 0.172004987659903 0.180324326636273 0.181621260099678 0.183422041813571 0.182282941980632 0.190125569761033 0.180811720771488 0.208159028623973 5 5 + 2942793 2943266 2943016.636 2941799 2943669 + gene protein_coding_gene TRUE TRUE AT5G09450.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G02820.1); similar to Os04g0450200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052937.1); similar to H0107B07.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66166.1); similar to OSJNBa0086B14.3 [Oryza sativa (japonica cultivar-group)] (GB:CAD40831.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.168061811907547 -1.73615873369244 0.111516734132159 1 1.38170043380498 13.2175036623993 -0.168061811907547 0.0901950743441933 AT5G43180_at 1.72646612245773 2.04667530119275 3.81445759405449 4.1956489893735 3.49558778307835 3.64838357789767 3.93914226633062 4.04958489755521 2.85161910389025 3.55533019744706 2.74130661711269 2.09623970818601 2.98983860389438 2.94307338390953 2.17174115856828 2.88731092286057 4.09765492900300 2.77824378288312 2.77064631464507 0.268265206189376 0.260928437940157 0.282201469604836 0.270243163100438 0.261998844753992 0.267092530714356 0.267959972079365 0.277345432686253 0.264775908462154 0.259092649615731 0.262915814650847 0.263835848527965 0.263416644127808 0.262745689103271 0.263752737419423 0.262266090393575 0.269242501135229 0.259092649615731 0.262543939261108 5 5 - 17353677 17354129 17353909.727 17353565 17355100 - gene protein_coding_gene TRUE TRUE AT5G43180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31330.1); similar to Os09g0494600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063551.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55679.1); similar to Os08g0521000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062272.1); contains InterPro domain Protein of unknown function DUF599; (InterPro:IPR006747) -0.169138856929795 -1.73502155279689 0.111724480174410 1 1.38016779028995 6.31318065497403 -0.169138856929795 0.0921237656627145 AT5G43980_at 2.99842633312971 3.07887816950434 3.77241232645736 3.89116919654108 4.93182716365672 4.18792895997340 3.95783447897780 3.21330456572592 3.34109267958695 3.56390271363436 4.14362256898791 4.34668178432367 4.35602483563426 4.62520825629166 4.33088833701968 4.56584738045246 4.17797270733026 3.8582327194859 3.08635963955664 0.244715301523363 0.237010307955589 0.250117015931992 0.249959870455157 0.244160363489215 0.266696609568766 0.237010307955589 0.240875599055707 0.242226589118540 0.241305285973796 0.238423886512666 0.237010307955589 0.238540116077074 0.238174927147881 0.239521932327816 0.242404734144612 0.245262877533808 0.239975208193342 0.241326774140501 5 5 - 17712916 17713454 17713260.727 17711907 17713849 - gene protein_coding_gene TRUE TRUE AT5G43980.1 receptor-like protein kinase-related similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G33330.1); similar to Protein of unknown function DUF26 [Medicago truncatula] (GB:ABE92040.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) 0.239588885007465 1.73501597268655 0.111725500439066 1 1.38016027093887 7.56947839988748 0.239588885007465 0.183819982034833 AT5G05260_at 1.80559658382617 1.41589523217364 1.89876162020835 1.73455944695993 1.41120210450022 1.68469262388852 1.20410251274765 1.33084431562411 1.90766496159932 2.16672247542492 1.6654257217631 1.66127504028113 1.68234424320466 1.64968334266563 1.46931457494787 1.50542538400270 1.85030956195878 1.86273462376923 1.90931744548450 0.232108526419682 0.230328770121425 0.230328770121425 0.240314658677325 0.235519688380163 0.239572952596983 0.230625502140773 0.235978168729404 0.238365821601816 0.234694419754113 0.230328770121425 0.234995453387110 0.236917139249042 0.239690117299487 0.231950441146249 0.233534049377821 0.238161682832706 0.236062977751824 0.234170654263656 5 5 - 1559780 1560354 1560072.1 1559779 1561766 - gene protein_coding_gene TRUE TRUE AT5G05260.1 CYP79A2 (CYTOCHROME P450 79A2); oxygen binding Encodes cytochrome P450 CYP79A2. Identical to Cytochrome P450 79A2 (EC 1.-.-.-) (CYP79A2) [Arabidopsis Thaliana] (GB:Q9FLC8;GB:Q9M4Y7); similar to CYP79A3P (cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene), heme binding / iron ion binding / monooxygenase [Arabidopsis thaliana] (TAIR:AT5G35917.1); similar to Cytochrome P450 79A1 (Tyrosine N-monooxygenase) (Cytochrome P450Tyr) (GB:Q43135); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.167624923673547 -1.73369242172162 0.111967735733766 1 1.37837710378129 3.39214798286293 -0.167624923673547 0.0898702120981586 AT5G52540_at 8.69733569539094 8.67602225717145 9.15322623009854 9.37666407669128 7.73734491120683 7.52514776086015 7.196410419699 7.2288084404833 8.12920865323615 7.05888851769111 8.44938801279113 8.92881774529825 7.70060675984533 8.32478221288037 9.0313738791935 8.34933065285192 7.08424840139468 8.3061705833863 6.49024418602092 0.189381142907778 0.188488225379850 0.207646675920219 0.193729991774246 0.193194141283462 0.214226897762960 0.196550099908475 0.205316087771359 0.191545477412798 0.196243636475379 0.193672509117174 0.191746864711844 0.18553090402722 0.194104617728857 0.189811940455004 0.188623928185967 0.204587194206909 0.203905073121801 0.218965089693409 5 0|5 /|- 21338937 21339381 21339142.333 21338654 21341006 - gene protein_coding_gene TRUE TRUE AT5G52540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24000.1); similar to Protein of unknown function DUF819 [Medicago truncatula] (GB:ABE85318.1); contains InterPro domain Protein of unknown function DUF819; (InterPro:IPR008537) -0.148876999214397 -1.73217836428866 0.112245418974502 1 1.37633814016688 15.9478467572525 -0.148876999214397 0.0537462197678529 AT5G20360_at 4.35814905046476 4.49512482245938 5.7368792170695 6.00655315495579 5.11718692381155 4.8745444642266 5.68330408535125 6.0203304954943 4.27467441129874 4.74704725844175 5.24535215428601 5.51487543872488 5.40952141133284 5.39421242894128 5.58173062585748 6.29566639129196 6.09721765570177 5.56952157871882 4.1021051668457 0.211103640526415 0.213585028023749 0.217854293421057 0.210665631724855 0.214199913984679 0.21556551250008 0.208319300470479 0.211717503232365 0.217473987412318 0.220038110683655 0.211774298547039 0.210386804580514 0.211578414797573 0.20931148289451 0.217547579971991 0.208632604399235 0.217624632295100 0.220531458103537 0.217700614342917 5 5|0 -|/ 6882189 6882754 6882565.6 6882123 6884632 - gene protein_coding_gene TRUE TRUE AT5G20360.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT4G32070.1); similar to Os08g0296900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061478.1); similar to putative octicosapeptide/Phox/Bem1p (PB1) domain-/tetratricopeptide repeat (TPR)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31284.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) -0.166805646085931 -1.73124841715408 0.112416282534427 1 1.37508624951634 10.2930696047969 -0.166805646085931 0.0889084329840905 AT5G43100_at 7.3626620115346 7.8230564150048 8.48244351545376 8.35104998292341 8.42682777554024 8.05717896896595 6.874455918576 7.0174610814947 7.36685322975425 7.12547419346532 7.97744787162573 7.97454982865925 7.66559279993643 7.99594994091815 7.58906886120432 7.91922423482866 7.4031039828173 8.0752395825581 7.48194562058238 0.198590402802928 0.200685561234187 0.196635648923119 0.202027770631548 0.194622946285442 0.204152519496965 0.204136635043697 0.200338603626212 0.210901665934469 0.205150802783121 0.200137763264410 0.192067961554011 0.192067961554011 0.213142739374279 0.200184119619309 0.196441674730884 0.198859680245609 0.205563800490588 0.199020780613112 5 5 + 17318608 17319918 17319230.5 17316351 17320286 + gene protein_coding_gene TRUE TRUE AT5G43100.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G50050.1); similar to Peptidase aspartic, active site [Medicago truncatula] (GB:ABE87026.1); similar to Os07g0592200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060161.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.178599386552024 -1.72911485476535 0.112809179645093 1 1.37221537794429 15.3742818682296 -0.178599386552024 0.107561232749024 AT5G19370_at 9.60763679371414 9.58136697136715 10.1942158977399 10.2063091950255 10.0455842781857 9.84044414281064 9.81340031608 9.77261706888104 9.91534699816176 9.94160618666369 10.4827012148824 10.6020731913630 10.3486490544702 10.5345326288681 10.7912828011807 10.7137422900634 10.3551247380486 10.5238655734963 9.79568916013296 0.0822166363050387 0.074640741932269 0.0775764583014604 0.0757545931601194 0.077173291099283 0.082450917639072 0.0753747429258504 0.077236027548674 0.0801352674445223 0.0778089206139378 0.0744120526026773 0.0744120526026773 0.0744120526026773 0.0820816225204013 0.0762247342632625 0.0744120526026773 0.079355329540702 0.0757402692309867 0.078849196562881 5 5|0 -|/ 6524249 6526083 6525020.1 6524122 6526689 - gene protein_coding_gene TRUE TRUE AT5G19370.1 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein similar to CNX5 (SIRTINOL RESISTANT 1), Mo-molybdopterin cofactor sulfurase [Arabidopsis thaliana] (TAIR:AT5G55130.2); similar to PpiC-type peptidyl-prolyl cis-trans isomerase; Rhodanese-like [Medicago truncatula] (GB:ABE77684.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain PpiC-type peptidyl-prolyl cis-trans isomerase; (InterPro:IPR000297) -0.142507625935822 -1.72819190927681 0.112979524445272 1 1.37097405489966 20.0968021087419 -0.142507625935822 0.0365395814099055 AT5G65240_at 3.90380298937454 4.1918519107423 4.98576730682798 5.63909996526216 5.7039817307208 4.23114774598529 3.39243199261403 3.27676615855212 3.40167342456572 3.57427413656412 4.68246019905514 4.65680138792637 4.09507963967564 4.88136077775563 4.06233783147312 4.9327319826152 4.47363274816715 4.56753455663924 4.19879873848803 0.235758833671573 0.235758833671573 0.243071828694750 0.241091564820613 0.251602520640925 0.252760767868373 0.240156135400828 0.238934777055319 0.240407456271517 0.238248015979240 0.235758833671573 0.239911321791184 0.244837054853507 0.240113811372483 0.244120171779928 0.238565763064878 0.242565611136788 0.235758833671573 0.235782916100041 5 5 - 26092376 26092841 26092620.818 26092206 26094876 - gene protein_coding_gene TRUE TRUE AT5G65240.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10290.1); similar to 4D11_24 [Brassica rapa subsp. pekinensis] (GB:AAZ67538.1); similar to putative receptor-like kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07247.1); similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98429.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.331205759251893 1.72705693925586 0.113189320065837 1 1.36944804106694 8.5500601368196 0.331205759251893 0.283959147257704 AT5G02120_at 11.0406329157911 11.1509694698350 11.5016673358735 11.4924989443134 11.6366796282121 11.6390623335117 11.7474580382203 11.7407525169991 11.9216222801889 11.8192019956247 12.6587833694698 12.5710624180817 12.2070352380318 12.4626733271916 12.5061970440335 12.5879061622545 12.2720282989609 12.3949855180344 11.8169796807756 0.0638657647904631 0.0626942112906728 0.0651829962017068 0.0617114563214827 0.0619300265356812 0.0658018991563392 0.0631601655609429 0.0670082900285245 0.065762341539248 0.0622049663908919 0.0612724366269253 0.0611460037149323 0.0667837089624756 0.0631630059894978 0.0639227692150704 0.0611460037149323 0.066256480569259 0.0629083058855659 0.0616645829648129 5 5|0 +|/ 419174 419604 419324 419088 419770 + gene protein_coding_gene TRUE TRUE AT5G02120.1 OHP (ONE HELIX PROTEIN) Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. similar to one helix protein [Ipomoea nil] (GB:AAP23938.1) -0.138507416960912 -1.72671424263423 0.113252735504474 1 1.36898737409096 23.6488077682797 -0.138507416960912 0.0191995986833570 AT5G07160_at 1.04344860096215 1.03354566932690 1.33808131733150 1.25001033950938 1.30960651910795 1.19246171921700 1.38044214659497 1.15883310656437 1.86547687476219 1.31369692413161 1.65557680362250 1.40729710201371 1.27303795178255 1.13117077913494 1.05154354667827 1.20603685630060 1.14978187827285 1.55812347369067 1.43534778929250 0.174733965063228 0.179519226933759 0.178564410564616 0.174733965063228 0.181498397396756 0.177672424171256 0.177085233053259 0.185685769301463 0.181933526469978 0.174733965063228 0.174833225924935 0.178998633505435 0.183043281401422 0.184103105771745 0.183703538687109 0.180064873619504 0.174733965063228 0.177184060782283 0.185580085960031 5 5 - 2220395 2220679 2220551.4 2219972 2220710 - gene protein_coding_gene TRUE TRUE AT5G07160.1 DNA binding / transcription factor similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G58120.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABE80500.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.145435431086171 -1.72657270008291 0.113278937069645 1 1.36879712064883 2.63442613315966 -0.145435431086171 0.0460104271887308 AT5G08370_at 8.50209059549172 8.25481761385381 9.23725374242485 8.8635464087845 9.27171671054198 9.28186979448558 8.78229108329143 8.57557022338043 8.57789145628824 9.07889935543006 9.37592094297054 9.38019931654275 9.36751536555812 8.97849031066005 9.51304157741693 9.30299976270875 9.520356932854 9.71514368913764 8.74671203027058 0.113747711621355 0.111426099008986 0.111292406330763 0.113451097659113 0.106997059769099 0.107567056787092 0.109713212827789 0.112415725310577 0.11620986750181 0.113368178836625 0.113272161770931 0.114300970750016 0.106938901702743 0.113393613827997 0.117587405413320 0.108124770368767 0.108774389305260 0.109062799208209 0.118898346436377 5 5|0 -|/ 2691141 2692214 2691476.5 2690880 2693551 - gene protein_coding_gene TRUE TRUE AT5G08370.1|AT5G08370.2 ATAGAL2 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 2); alpha-galactosidase similar to ATAGAL1 (ARABIDOPSIS THALIANA ALPHA-GALACTOSIDASE 1), alpha-galactosidase [Arabidopsis thaliana] (TAIR:AT5G08380.1); similar to acid alpha galactosidase 2 [Cucumis sativus] (GB:ABC88435.1); contains InterPro domain Glycoside hydrolase, family 27; (InterPro:IPR002241); contains InterPro domain Glycoside hydrolase, clan GH-D; (InterPro:IPR000111) -0.164128988577015 -1.72496575580478 0.113576789281931 1 1.36663772830792 17.9438325721455 -0.164128988577015 0.0854192101789508 AT5G14320_at 11.3490591702754 11.3703015568691 11.3904390412555 11.4625335542748 11.8288445773317 11.5995582115497 11.5561690487807 11.5071237987454 11.6337853407961 11.80776471212 12.3951126769783 12.6060327368343 12.0602959063517 12.3185513700583 12.6307732049667 12.3543225373951 12.0586722297295 12.2464131359403 11.6821816653645 0.0939847476070525 0.0909309043029778 0.0933713358333271 0.0961268909292732 0.0923857130474659 0.0972750944310205 0.0919643144638258 0.093992552603298 0.106944169891004 0.092499251228681 0.09107736890051 0.0917554215282167 0.0921795518590936 0.0943390275684002 0.0966093630021105 0.0909552112221006 0.101916014430389 0.099832108499251 0.0917326377338497 5 5 - 4617918 4618750 4618311.182 4617653 4618915 - gene protein_coding_gene TRUE TRUE AT5G14320.1 30S ribosomal protein S13, chloroplast (CS13) Identical to 30S ribosomal protein S13, chloroplast precursor (CS13) (RPS13) [Arabidopsis Thaliana] (GB:P42732;GB:Q9LY97); similar to 30S ribosomal protein S13, chloroplast, putative [Arabidopsis thaliana] (TAIR:AT1G77750.1); similar to putative 30S ribosomal protein S13 [Oryza sativa (japonica cultivar-group)] (GB:AAS07249.1); contains InterPro domain Ribosomal protein S13; (InterPro:IPR001892); contains InterPro domain Ribosomal protein S13-like, H2TH; (InterPro:IPR010979) -0.144042001685171 -1.72392466235239 0.113770136112914 1 1.36523928003382 23.5288447686563 -0.144042001685171 0.0426103077263788 AT5G54850_at 2.41365947761774 2.10748778726224 2.20365274006613 2.17298492569904 2.24676165834568 2.19455116019428 1.63269239653921 1.90262647376511 2.51779078076976 2.10885682006058 3.04681236325391 3.22810684808551 2.76915218779698 3.02721165003156 2.63801420871062 2.9030411987214 2.44295310577399 3.04571069515338 2.22499408999293 0.195430879938009 0.194820754662655 0.197398092698556 0.197922084200009 0.198231475478928 0.199515112480428 0.20789148496846 0.199795823591163 0.193322582473111 0.202041952244803 0.193322582473111 0.208003414161469 0.1952519571896 0.200989192256514 0.202180040928409 0.193322582473111 0.199583108065793 0.201663439247252 0.202534921810626 5 5 - 22297996 22298511 22298293.909 22297809 22298654 - gene protein_coding_gene TRUE TRUE AT5G54850.1 similar to Os07g0520600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059803.1) 0.156177584494135 1.72230610437458 0.114071316284349 1 1.36306602950901 4.69505500033551 0.156177584494135 0.071409316605367 AT5G65420_at 1.19560625140517 1.77256781771028 2.04529192500426 1.72917420850854 1.80564237368205 1.33195271569337 1.69867414147825 1.98738047041725 1.40244389965229 1.81041966157939 2.29058240184654 2.64127550756859 2.16664758492482 2.07111063266546 2.52100192638923 2.01644874178893 2.48866849938481 1.91471770683684 1.66383904328721 0.223907780814434 0.236755001819334 0.228175480213151 0.230017228123950 0.231532194388218 0.232713841992827 0.231852483293102 0.227566545657297 0.234971391842454 0.228804834066044 0.227437872189977 0.241177896156892 0.23790015104146 0.237048159980913 0.229344332069968 0.225327544147045 0.22871326506155 0.229131192368052 0.232209196246679 5 0|5 /|- 26158840 26160174 26159470.2 26158696 26161219 - gene protein_coding_gene TRUE TRUE AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination. similar to CYCD4,2 (CYCLIN D4,2), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G10440.1); similar to cyclin D2.1 protein [Nicotiana tabacum] (GB:CAA09852.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.208631751224227 1.72198714144899 0.114130753403934 1 1.36263788147869 3.64047331799504 0.208631751224227 0.148922391399549 AT5G15770_at 3.90549338526578 4.11769192462942 4.04045168506007 4.60450377189397 4.41885566075672 4.50247439987504 3.87456817453442 3.97059628868972 2.74059899001252 3.25014780458887 4.73014089778165 4.80302598716432 4.57688059747243 4.53653934729141 4.69150426381589 4.50075470282551 4.13242389905853 4.37054698043876 3.38542271609988 0.223790508018462 0.221974384961773 0.219193515440326 0.228824145949166 0.23284549719334 0.241369508939624 0.228776639198835 0.230368580895924 0.235050682718473 0.223963461122416 0.219318122053054 0.22486093931571 0.220188392967162 0.21768910171774 0.229294699084074 0.219400148650445 0.226189881174259 0.223370830518470 0.229441687607828 5 5 - 5144099 5144521 5144329.364 5144096 5144545 - gene protein_coding_gene TRUE TRUE AT5G15770.1 GCN5-related N-acetyltransferase (GNAT) family protein Encodes a putative glucose-6-phosphate acetyltransferase involved in UDP-N-acetylglucosamine biosynthesis. similar to hypothetical protein [Cleome spinosa] (GB:ABD96849.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.177174515392844 1.72165439630868 0.114192788520953 1 1.36219127765427 8.01338787202889 0.177174515392844 0.106593310472704 AT5G15840_at 1.56111907104075 1.49985122096834 2.02406897691926 1.97194382678529 1.55460768072569 1.50480205965948 1.20171073121455 1.47106522399114 1.50337124138411 1.8174902114729 1.69924600358092 1.65673626733678 1.49470932811381 1.85569393330453 1.83457574151059 1.74648737823825 1.94012558864498 1.81199064165196 1.35018583309633 0.208660876536739 0.212214178698603 0.209245561033137 0.213058052373374 0.208660876536739 0.209494673711038 0.215519454409955 0.208660876536739 0.220928912869400 0.209453348973337 0.215396699283973 0.213765899045117 0.212074991433175 0.216122066452535 0.211791906626692 0.215464657587512 0.216812310228897 0.208660876536739 0.208889480777621 5 5|0 -|/ 5171347 5172079 5171685.2 5171185 5172761 - gene protein_coding_gene TRUE TRUE AT5G15840.1|AT5G15840.2 CO (CONSTANS); transcription factor/ zinc ion binding|CO (CONSTANS); zinc ion binding Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1. Identical to Zinc finger protein CONSTANS (CO) [Arabidopsis Thaliana] (GB:Q39057); similar to COL1 (CONSTANS-LIKE 1), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15850.1); similar to constans [Brassica napus] (GB:AAC27694.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT; (InterPro:IPR010402); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315)|Identical to Zinc finger protein CONSTANS (CO) [Arabidopsis Thaliana] (GB:Q39057); similar to COL1 (CONSTANS-LIKE 1), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15850.1); similar to constans-like protein [Brassica nigra] (GB:AAG27546.1); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315) 0.146133948183529 1.72008690466611 0.114485431779329 1 1.36008803024766 3.25462678505415 0.146133948183529 0.0494049768988849 AT5G48050_at 1.44481291214828 1.19688577853861 1.17307987024052 1.31591105402419 1.04335957981876 1.14219962103619 1.50820430628987 1.05232257419852 1.52889333323080 1.32854000479911 1.36338695618538 1.22061746558095 1.36682096548683 1.47554806140917 1.39364914943984 1.10706676148932 1.62349651537095 1.32334369704738 1.3201672731707 0.194775652011330 0.200073801726095 0.199120499036767 0.191820313608562 0.199578312234475 0.193681431186392 0.199742473668381 0.198353604846165 0.197970243479388 0.195627505240491 0.199756743599089 0.198337760314648 0.20158878271465 0.191609551605859 0.193407601504118 0.191609551605859 0.194866477848563 0.193584501529211 0.192655700613875 5 5 - 19489912 19490442 19490135.636 19489887 19490996 - gene protein_coding_gene TRUE TRUE AT5G48050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34070.1); similar to retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] (GB:ABA94365.1); contains InterPro domain Cyclin-like; (InterPro:IPR011028) -0.169237085407256 -1.71963506368022 0.114569913749822 1 1.35948194022552 2.61048432882091 -0.169237085407256 0.094701564652622 AT5G10500_at 0.446342077119559 0.487634105382812 0.88839798845749 0.87158293170118 0.942013415279116 0.70056743395071 0.574155619334075 0.410580298169173 0.687419749548061 0.365370048318385 0.499949174280582 0.981489425444755 0.708960202358585 0.485745979474284 0.440631322527603 0.167324070577715 0.58038781112341 0.467080735860231 0.504893499724001 0.199908434494539 0.192349211666215 0.190538417122573 0.189522685222805 0.19779155550589 0.190274021749043 0.189125902391024 0.191724988635809 0.19440997355718 0.193020773767521 0.195931530976094 0.190498045120479 0.193634448130401 0.192826822945224 0.193623510116019 0.188603863294966 0.195458088156972 0.203980525770476 0.198611540898627 5 5 + 3307543 3307988 3307789.455 3305332 3308110 + gene protein_coding_gene TRUE TRUE AT5G10500.1 kinase interacting family protein similar to kinase interacting protein-related [Arabidopsis thaliana] (TAIR:AT2G22560.1); similar to unknown [Lycopersicon esculentum] (GB:AAK84476.1); contains InterPro domain KIP1-like; (InterPro:IPR011684) 0.146555151752058 1.71760121136863 0.114950884689680 1 1.35675480831371 1.19549616170895 0.146555151752058 0.0510557673867548 AT5G50440_at 4.40246920977333 4.30971780252505 4.88368456088988 4.44437198512063 5.34898710228518 4.98002762334467 3.47036146014892 3.62394709648599 3.28803531435968 3.27243319339593 4.41873921567014 4.33685846205748 4.03385651169843 4.82664128799595 4.24400205515224 4.37373863747686 3.65345722689167 4.35515908065862 3.49468096925493 0.216554344111725 0.208990016328895 0.208930339547377 0.207654207502671 0.206666600254552 0.213517516771035 0.212513816475122 0.224548622318288 0.227507476619615 0.207235176090798 0.208993932043656 0.209073568347772 0.211145272491275 0.210102997082949 0.210543772166250 0.213242529199731 0.218799576483735 0.208433631052118 0.212135184797809 5 5 - 20554887 20555566 20555214.182 20554751 20556169 - gene protein_coding_gene TRUE TRUE AT5G50440.1 MEMB12 (Golgi SNARE protein membrin 12); v-SNARE member of Membrin Gene Family Identical to Membrin 12 (AtMEMB12) (Golgi SNAP receptor complex member 2-2) (MEMB12) [Arabidopsis Thaliana] (GB:Q9FK28); similar to MEMB11 (Golgi SNARE protein membrin 11), v-SNARE [Arabidopsis thaliana] (TAIR:AT2G36900.1); similar to PREDICTED: similar to Gol (GB:XP_794856.2); similar to Os03g0655200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050802.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) 0.175015694261344 1.71735283569415 0.114997487274551 1 1.35642188493733 8.24895738109022 0.175015694261344 0.104022697430477 AT5G44470_at 1.55856652861264 1.76745609705121 2.15065114793029 1.96596609765802 1.46964447141495 1.88490778291678 1.76797573712368 1.77261414707688 2.78778976646865 1.97278636853860 2.38307618434334 1.92547938964715 2.27940855797188 2.03298781515101 1.86660871651554 2.31754306967207 2.15944504104677 2.46547515223442 2.18177892956283 0.201731871260098 0.197523803817812 0.200252543486524 0.205432776623516 0.192088556252470 0.19973779030266 0.199132618361528 0.196654933241981 0.201800833555678 0.200137111238065 0.19770702551943 0.194183500367164 0.204536877567253 0.191669533952503 0.193388390093732 0.194559515524916 0.193684825924074 0.193709801880342 0.191669533952503 5 5 + 17935987 17936367 17936222.545 17935966 17936391 + gene protein_coding_gene TRUE TRUE AT5G44470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23320.1); similar to 52O08_2 [Brassica rapa subsp. pekinensis] (GB:AAZ67547.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) -0.164006413292490 -1.71663905351723 0.115131508554339 1 1.35546527040860 4.03865842406279 -0.164006413292490 0.086563415333805 AT5G47970_at 5.74369051203681 5.9616120293804 6.58453426890856 6.23936162788030 7.04604502868446 5.89620865735998 5.76617312140796 6.48880668761092 5.36893807924537 5.31225726021374 6.25572926196554 6.48301005724539 6.39531711452324 6.90421769578769 6.11064453159488 7.08326885193784 5.37971845190894 5.98257940185175 5.21841815332895 0.23258175690694 0.227206787666418 0.238815689478390 0.238486099955630 0.232098357216997 0.242556541464870 0.232315454954241 0.231256974520528 0.245591076209103 0.232103667137340 0.230105740819707 0.230965193088507 0.228835213250584 0.227206787666418 0.227735059042404 0.227206787666418 0.245207749414494 0.232991324900534 0.230400708657836 5 5|0 +|/ 19441961 19442775 19442365.889 19439429 19443037 + gene protein_coding_gene TRUE TRUE AT5G47970.1|AT5G47970.2 nitrogen regulation family protein|FAD binding / oxidoreductase similar to FAD binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G63510.1); similar to Os04g0278900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052360.1); similar to tRNA-dihydrouridine synthase (ISS) [Ostreococcus tauri] (GB:CAL55090.1); similar to OSIGBa0113C11.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66291.1); contains InterPro domain Dihydrouridine synthase, DuS; (InterPro:IPR001269); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009) -0.292494142660549 -1.71574742957006 0.115299119392918 1 1.35427060528341 12.0278949092160 -0.292494142660549 0.245405724080919 AT5G47820_at 7.71989323268973 7.72957513627038 8.67034454757035 8.6323197261729 9.10736490245307 8.90889459895272 8.13838111376768 7.65401168470662 8.27063698531126 8.2547156106559 9.45746115852758 9.26943582827096 9.29468643052462 9.24832761026186 9.28825356715238 9.33438873569548 9.23044359682209 9.32651293792757 8.45627841573035 0.123913233911340 0.126160223940789 0.126988072029190 0.125183630572853 0.118570475370461 0.124737664827060 0.135514354027201 0.126547674085538 0.138201877744782 0.124996060171550 0.125864078833626 0.118570475370461 0.121129072991326 0.124201787566367 0.121445533107827 0.118782637325460 0.126540770315284 0.126196807449218 0.118570475370461 5 5|0 +|/ 19388808 19389396 19389122.5 19383709 19390015 + gene protein_coding_gene TRUE TRUE AT5G47820.1|AT5G47820.2 FRA1 (FRAGILE FIBER 1); microtubule motor encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. similar to chromosome-associated kinesin, putative [Arabidopsis thaliana] (TAIR:AT5G60930.1); similar to KICP-02, microtubule motor [Arabidopsis thaliana] (TAIR:AT3G50240.1); similar to kinesin-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72688.1); similar to KIF4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD34075.1); similar to putative KIF4 [Oryza sativa (japonica cultivar-group)] (GB:BAD16508.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) 0.166451804241419 1.71548905803380 0.115347730097354 1 1.35392448061858 17.1367976530131 0.166451804241419 0.0908403198099195 AT5G60230_at 3.70150726930492 4.02879260840216 4.46777163783956 4.20585230001321 4.60170754441843 4.73498268659783 4.13641823413461 3.82099192210972 4.08683998538805 3.69515016807383 4.19571515380136 4.59509150860287 5.09846813521884 5.02033665172873 4.82687877211005 4.56284131720623 4.40572029831272 4.60264557109883 4.15256949452246 0.219341974235025 0.221500669112283 0.218184402027456 0.212860373881078 0.212860373881078 0.213065833768868 0.216289909214243 0.21401164058328 0.213081117335594 0.220275118260834 0.215850743333619 0.215878208212641 0.218482919422121 0.220781957243748 0.217362282413707 0.220372878564854 0.217971322106196 0.220817159674587 0.224495253982338 5 5 - 24267429 24267978 24267719.455 24267317 24268839 - gene protein_coding_gene TRUE TRUE AT5G60230.1|AT5G60230.2 SEN2 (SPLICING ENDONUCLEASE 2); tRNA-intron endonuclease putative subunit of tRNA splicing endonuclease Identical to tRNA-splicing endonuclease subunit Sen2-2 (EC 3.1.27.9) (AtSen2) (tRNA-intron endonuclease Sen2-2) (SEN2) [Arabidopsis Thaliana] (GB:Q9LSS3;GB:Q3E887); similar to ATSEN1 (SPLICING ENDONUCLEASE 1) [Arabidopsis thaliana] (TAIR:AT3G45590.2); similar to tRNA intron endonuclease, catalytic C-terminal [Medicago truncatula] (GB:ABE94660.1); contains InterPro domain tRNA-intron endonuclease; (InterPro:IPR006676); contains InterPro domain tRNA intron endonuclease, catalytic C-terminal; (InterPro:IPR006677) -0.168013267177769 -1.71371518474906 0.115681969872891 1 1.35154887161998 8.53307738802159 -0.168013267177769 0.0936693365119404 AT5G24830_at 4.2639522388342 4.17286640861957 5.22236675453965 5.05356125309897 5.6158537341153 5.41790527733992 4.45450618925101 4.15946713672501 3.89489968249358 3.86561564253865 5.06485833478597 4.57957378997279 4.66161306623118 5.07786625111835 5.3230251592772 5.14135598120572 5.27642295052441 4.89418450283239 4.27291205545265 0.225713975542582 0.22225581292473 0.223698987458893 0.22225581292473 0.234020568679813 0.229157386410949 0.231204037317599 0.222274950345388 0.240641341729726 0.228304882262683 0.228996318761298 0.231144369129323 0.227596270691949 0.228026717920426 0.224420308690902 0.22225581292473 0.233476586666989 0.225244070102438 0.230390234052683 5 5 + 8532749 8533154 8532943.909 8530981 8533870 + gene protein_coding_gene TRUE TRUE AT5G24830.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G12300.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os03g0165100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049065.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.154533015265755 1.71273801607682 0.115866463820387 1 1.35024077992272 9.30181235639302 0.154533015265755 0.0698728558506325 AT5G34450_at 1.98539445651041 1.93747798672864 2.22859125266716 2.15035287455484 1.75109389542181 1.83158093117938 1.59095233274469 2.02374362374476 2.36987713420566 2.15425137406653 1.68394974027497 1.82377034981456 2.27372128598572 2.2081270786651 2.29847567219102 2.12480440932547 2.18237764828839 2.51953628983001 2.09468456252025 0.162722431125073 0.161328430191963 0.157461896624512 0.161869701948501 0.158477519517744 0.156629759341274 0.155835490023734 0.157944254283769 0.159901258573886 0.160282192331048 0.164910898496442 0.157184341562140 0.16422799568172 0.160221570274932 0.158510218587963 0.159190100445163 0.162651185625248 0.168946681879909 0.171641175012645 5 5|0 +|/ 12910535 12911188 12910898.625 12910290 12911238 + gene protein_coding_gene TRUE TRUE AT5G34450.1 replication protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05087.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.158564357521085 -1.71141032566719 0.116117562242652 1 1.34846409154708 4.11020658564115 -0.158564357521085 0.0778176037203451 AT5G02690_at 3.42484731896878 2.93158807826206 4.18661406640263 4.29044865155939 4.53732978591406 3.63287905944264 3.17876085447419 2.79564267502863 3.0165713989223 3.18203149948586 4.11865333275355 4.11183261930796 3.91257592235687 3.72216174105118 3.64301286711719 4.27941475806059 3.56868723388457 3.64968836016799 3.4608061505704 0.232291720558976 0.236265822708183 0.238339236438838 0.232591788894172 0.235146580999690 0.24091603191617 0.231472287533683 0.232120243061329 0.247868145151291 0.237109344080688 0.237926455849953 0.233921882293052 0.234417949275061 0.242061036581526 0.235801291103956 0.23790082957008 0.237523228196415 0.245913144080014 0.236253891461441 5 5|0 +|/ 607365 607410 607380.778 607358 607608 + gene protein_coding_gene TRUE TRUE AT5G02690.1 unknown protein 0.242593778759309 1.71134598337759 0.116129743359964 1 1.34837800848466 7.17004199658839 0.242593778759309 0.191058693738777 AT5G28470_at 1.81690721509964 1.44929080156235 1.13839839173390 1.79091624117012 1.28430061268069 0.849777342307529 1.05020023531676 1.67345492596778 1.70019143301607 1.32995521849733 1.19287699010503 1.56514908490546 1.11000664620365 1.54761396297379 0.86876625246943 1.27773947156025 0.694769105543525 1.69780086338489 0.897425731631138 0.285083730747608 0.272290488723939 0.283818029092972 0.294722784900983 0.272009998599396 0.276340620127819 0.272424060420458 0.276533789884476 0.290371397616727 0.270000476439347 0.273292855215867 0.280861222460445 0.27406749589593 0.273523063122999 0.273691618057718 0.273190257577352 0.287744582062561 0.275861768245249 0.280741026593885 5 5 + 10431672 10432293 10432000.727 10429805 10432361 + gene protein_coding_gene TRUE TRUE AT5G28470.1 transporter similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G69870.1); similar to nitrate transporter NRT1-5 [Glycine max] (GB:BAB19760.1); similar to Os01g0913300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045170.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain Gamma-crystallin related; (InterPro:IPR011024) -0.236861969787979 -1.71025316988857 0.116336807689274 1 1.34691620280058 2.65842126649223 -0.236861969787979 0.184624124859452 AT5G23970_at 0.905769568111679 0.909874249590434 0.78846700508748 0.849500120824067 1.04099591671479 1.01253913639698 1.32884175437305 1.07887658619827 1.03961112302547 1.23362906117836 1.34605904007524 1.40721739589817 1.28192443117558 1.31643303171642 0.833735599951675 0.904741831209098 1.27699775885341 1.48220188369948 1.44681066708171 0.192995285067046 0.198597600895758 0.193182241803232 0.197370629305086 0.192995285067046 0.199011447859652 0.195610187919456 0.196740676157214 0.200353771064774 0.204351572023857 0.195929652762867 0.192995285067046 0.198262264107606 0.195090722168995 0.193986909205318 0.196449748713356 0.198036207933926 0.192995285067046 0.205874292963441 5 5 + 8097019 8097591 8097316.636 8096293 8097663 + gene protein_coding_gene TRUE TRUE AT5G23970.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G30280.1); similar to acyltransferase 1 [Capsicum chinense] (GB:AAN85435.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.143618846802599 -1.70999869515992 0.116385072758765 1 1.34657587467176 2.22494845316254 -0.143618846802599 0.0448055412903257 AT5G48810_at 11.1480287819560 11.3429902464991 11.7437430649485 12.0137493627047 12.1325611213732 11.9344040273324 10.8358688948658 11.1753825679868 11.4503146234677 11.0901066034341 11.9383938401368 11.8151898296447 11.8995650765436 12.05837417213 11.5303858283218 11.8778365289678 11.5228750049812 11.8804298459074 11.1860936860360 0.0866885615326522 0.0841408985659844 0.086508126244942 0.0936507025009622 0.0938690260871174 0.0879932397761028 0.0884828297578289 0.0848924907546456 0.087742360001214 0.0861320209998668 0.0832715423441757 0.0832715423441757 0.0832715423441757 0.0856455507372963 0.0869501924762981 0.0832715423441757 0.0953193493501728 0.0854319486701297 0.0872034450865754 5 5|0 -|/ 19806475 19807363 19806795 19806293 19807560 - gene protein_coding_gene TRUE TRUE AT5G48810.1 ATB5-B (Cytochrome b5 B) Encodes a cytochrome b5 isoform. similar to B5 #4 (cytochrome b5 family protein #4), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G32720.1); similar to Cytochrome b5 (GB:P49098); similar to cytochrome b5 - common tobacco (GB:S46306); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.164866637819983 1.70956019362749 0.116468283625931 1 1.34598949654822 23.0696174601959 0.164866637819983 0.0891608028960084 AT5G16280_at 6.11130871922026 5.87490054468119 6.80629979429902 6.6664983503399 7.43668811590465 6.6629010875084 7.15261608514179 6.01998791044767 6.37945391504697 6.19076102259642 7.60921890983925 7.56912884576774 6.74199818667591 7.5454428529602 7.3069942580966 7.3817318942033 7.02982104491802 7.07778512323495 6.55472936679391 0.253332525829631 0.253031174806711 0.252852903930474 0.245126936517409 0.24558653789202 0.259862537590211 0.245126936517409 0.257288740917032 0.26053303398699 0.249988572956105 0.247931232602352 0.248251297667688 0.248676478803754 0.250412536969060 0.245126936517409 0.246574850362268 0.249877918197830 0.250353195555114 0.245437727154622 5 5 - 5323393 5324016 5323710.364 5323178 5331348 - gene protein_coding_gene TRUE TRUE AT5G16280.1 binding similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99240.1); similar to Os03g0786900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051493.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.287962459992524 -1.70719370597583 0.116918277109038 1 1.34282632873763 13.4202733630801 -0.287962459992524 0.242092664150854 AT5G02730_at 0.389039572369913 0.0516725484366151 0.0244803415851774 -0.0234887012239948 0.233068480920527 0.456675095276067 0.332338968690695 0.464781345410258 0.442172730923062 0.361723211478686 0.172886416111565 0.143155292829181 0.268774874489258 0.0633046958833562 0.203884325883167 0.0147468941015436 0.803190149567541 0.523817857786818 0.261152026062223 0.201387866646270 0.204027404049011 0.213070544820827 0.204645352059788 0.201387866646270 0.206107835122133 0.201387866646270 0.202701761075871 0.215925790970279 0.201417157806313 0.203329909969098 0.205505309011229 0.201387866646270 0.208672412874895 0.204560989506072 0.203932289348367 0.201703387385557 0.208239440741655 0.202195660511407 5 5 + 615701 616138 615929.273 615608 616225 + gene protein_coding_gene TRUE TRUE AT5G02730.1 allergen V5/Tpx-1-related family protein similar to pathogenesis-related protein, putative [Arabidopsis thaliana] (TAIR:AT3G09590.1); similar to pathogenisis-related protein 1.1 [Triticum aestivum] (GB:CAA07473.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) -0.156114834354875 -1.70596433785299 0.117152661040052 1 1.34118400937960 0.555688982842929 -0.156114834354875 0.0741632498445783 AT5G38690_at 2.98357503529791 3.21572894999796 3.67961714578348 3.89441487342832 4.13033130153229 3.26861965205879 3.65641293521373 3.53480231675545 3.44302181492436 3.7481035068752 3.89108127911896 4.57752820684621 3.69485116823325 3.75957030172061 4.38488044508865 3.90256753249098 3.65521051222451 3.8165678280098 3.31604831534777 0.252107790720533 0.252058233827207 0.255503395769174 0.25071825931219 0.246699894530187 0.25997243084365 0.254675324033884 0.253114492954451 0.256157579939930 0.246699894530187 0.246699894530187 0.253521463592803 0.24890952589326 0.253332850114852 0.250190284695736 0.252363922281081 0.266124956473563 0.246699894530187 0.247621782930256 5 5|0 -|/ 15497207 15498060 15497522.6 15496407 15500480 - gene protein_coding_gene TRUE TRUE AT5G38690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67780.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_001188312.1); similar to PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] (GB:XP_788723.2); similar to Os05g0300700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055133.1); contains InterPro domain DDT; (InterPro:IPR004022) -0.215690098186160 -1.70508664935263 0.117320254210713 1 1.34001188478198 7.27677446205802 -0.215690098186160 0.160238677387219 AT5G04360_at 8.39703055673405 8.23221336727297 8.78729434138356 8.45529055878702 9.22126868072771 8.86652671322564 8.63146751072716 8.36218932389848 7.8643311495961 8.05411465544159 9.06086285127922 8.81921207171489 8.46772839840468 8.83736078525643 8.22144573522213 8.61887021889368 8.7592794104202 8.64460189146132 7.30903713039042 0.141364020135975 0.141071961807746 0.141071961807746 0.145050098049958 0.141071961807746 0.147561617576323 0.144527464918418 0.146635382198384 0.152782947785937 0.157190134244607 0.141320695849697 0.141071961807746 0.150645604003158 0.150093159165858 0.152191732161908 0.142521086777941 0.153228052323829 0.152890895873149 0.174626957536472 5 5|0 +|/ 1227220 1228150 1227777 1221531 1228612 + gene protein_coding_gene TRUE TRUE AT5G04360.1 ATPU1 (PULLULANASE 1); alpha-amylase/ limit dextrinase Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. similar to ATISA3/ISA3 (ISOAMYLASE 3), alpha-amylase [Arabidopsis thaliana] (TAIR:AT4G09020.1); similar to H0806H05.4 [Oryza sativa (indica cultivar-group)] (GB:CAC09471.2); similar to pullulanase [Spinacia oleracea] (GB:CAA58803.1); similar to pullulanase-type starch debranching enzyme [Zea mays] (GB:AAD11599.1); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193); contains InterPro domain Alpha-1,6-glucosidases, pullulanase-type; (InterPro:IPR011839) -0.171131250321546 -1.70314503074698 0.117691768991733 1 1.33742005457005 16.8297423726650 -0.171131250321546 0.100273765426600 AT5G61550_at 1.86557681793197 1.30598984743808 1.25070414162475 1.4638798064795 0.733623443760527 1.26166623350936 1.34044374681483 1.47402525463031 1.54504064714690 1.68115221873651 1.93204475501641 1.37484051823404 1.45245468299767 1.85219040823255 1.77350558610830 1.63742490084506 2.20261112764402 1.59681839301163 1.56743587199473 0.200023366892769 0.20248801623173 0.202764305436444 0.204638397662740 0.21201068064005 0.203099617589672 0.209283481454082 0.200023366892769 0.211255995745568 0.211357564515592 0.205214257233202 0.203697136745680 0.213145628108225 0.207671626803443 0.211323737244495 0.200023366892769 0.214708060035549 0.217621258248471 0.211167979293337 5 5 + 24768143 24768737 24768359 24765328 24768981 + gene protein_coding_gene TRUE TRUE AT5G61550.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61560.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51270.1); similar to U-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93477.1); similar to Os10g0561500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065387.1); similar to Os06g0140800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056754.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain U box; (InterPro:IPR003613) -0.199406261712669 -1.70280408272382 0.117757115967021 1 1.33696509152221 2.99979493275896 -0.199406261712669 0.14008394488227 AT5G13840_at 1.68560990731468 1.24157950846215 2.1375839948238 1.78023580693468 1.54293779847828 1.75541860201155 1.79643924953702 1.47976553701422 1.94257834815981 2.17528759190886 2.39242614812299 3.24380644608192 2.08463192459110 2.49478406325398 3.05828215361544 2.23450433151108 2.58152170754904 2.51133429482617 2.24170081986643 0.198583027745026 0.199063541255976 0.201386440673758 0.198625794283535 0.196338121470518 0.209538858859075 0.197609917652904 0.199603454759280 0.200924879043781 0.206079062985161 0.198450150585096 0.199552886883051 0.196793858423272 0.198587303378758 0.198026210804008 0.203298242222632 0.198810065639887 0.203241214589521 0.199123446614206 5 5 - 4468860 4469575 4469174.455 4468511 4470994 - gene protein_coding_gene TRUE TRUE AT5G13840.1 WD-40 repeat family protein similar to signal transducer [Arabidopsis thaliana] (TAIR:AT4G22910.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G11920.1); similar to Os01g0972900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045543.1); similar to WD-repeat cell cycle regulatory protein [Glycine max] (GB:AAS13372.1); similar to B-type cell cycle switch protein ccs52B [Medicago truncatula] (GB:AAQ72359.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Cdc20/Fizzy; (InterPro:IPR000002); contains InterPro domain Nitrous oxide reductase, N-terminal; (InterPro:IPR011045) 0.18349945951447 1.70232510985393 0.117848972210622 1 1.33632602917255 4.02495478574155 0.18349945951447 0.118677029416893 AT5G39620_at 0.929359813402705 1.09310769639928 1.46822274955485 1.3299369220584 0.862880487601143 0.941162609578313 0.783564434011563 1.52321950625906 1.72973382315373 1.58097717230819 0.81719622278234 1.17380153255624 1.28660620832163 1.52800825768181 1.44293511677086 1.33872368952987 1.51161553900332 1.49356012968169 1.52059175236034 0.184299101439615 0.184404594764072 0.192609671262698 0.193094531122166 0.196156665202819 0.185528365405244 0.185973128954534 0.188538856226346 0.187833860738983 0.194884713796302 0.187935680138144 0.184299101439615 0.190501227841219 0.195663718305167 0.185946642238567 0.185393262376252 0.195487257601883 0.196078265638842 0.18878493178603 5 0|5 /|- 15881405 15882494 15882118 15881394 15883010 - gene protein_coding_gene TRUE TRUE AT5G39620.1 AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP binding similar to AtRABG2/AtRab7A (Arabidopsis Rab GTPase homolog G2), GTP binding [Arabidopsis thaliana] (TAIR:AT2G21880.1); similar to RAB7A [Lotus japonicus] (GB:CAA98168.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) -0.194614966239893 -1.70176556190701 0.117956362475317 1 1.3355795819347 2.58367682051569 -0.194614966239893 0.133953035551428 AT5G57600_at 2.36610406372663 2.24961636628737 2.45304052452198 2.01714475887808 2.21749993597997 2.57545308060754 2.14955493419930 2.12005463216501 2.26358147480066 2.42249197686756 2.18676692273586 1.97677810535808 2.51959898830084 2.03706602789527 2.24784003349133 2.43415822427178 2.50858166134374 2.50085205225374 2.17372142793386 0.19398939791909 0.192666598194934 0.192788373391009 0.200569660940225 0.188825356509933 0.197217631488151 0.193080247124165 0.191524729898134 0.203638251087226 0.191580285574533 0.199535803750453 0.191392158496069 0.197042025936475 0.188825356509933 0.194069755645743 0.189525438811133 0.193040056913248 0.191836638051769 0.195419819096122 5 5|0 -|/ 23339076 23339488 23339287.2 23338972 23339913 - gene protein_coding_gene TRUE TRUE AT5G57600.1 similar to Os08g0245400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061354.1); similar to Alanine-glyoxylate aminotransferase AGT2 (ISS) [Ostreococcus tauri] (GB:CAL56482.1); contains domain FAMILY NOT NAMED (PTHR21343); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) -0.170617299632517 -1.70105482243499 0.118092896664698 1 1.33463163084688 4.56258530962424 -0.170617299632517 0.09979947437567 AT5G35930_at 4.00244154345672 3.81019982378540 4.01095361525732 4.31149324015027 4.51773170757594 4.78239919548911 3.24533573354749 3.93598639570583 4.01057152353522 4.11220471646299 4.39962934666545 4.61896946887919 4.56483101781147 4.76596769220658 4.73965811269484 4.60965862954837 4.86697037725157 4.27911547386322 4.13299480308877 0.227626372620161 0.234220373882972 0.236392823728456 0.234013404084799 0.234421355291019 0.243992656965436 0.24037876532391 0.247105457753891 0.241005662993901 0.233352783423106 0.234849153591222 0.233376823823342 0.231856989607011 0.238741620211301 0.234782822793649 0.232466302643077 0.244451674304077 0.242235191191138 0.230053815397644 5 5|0 -|/ 14084433 14085807 14085003.1 14084222 14091981 - gene protein_coding_gene TRUE TRUE AT5G35930.1 AMP-dependent synthetase and ligase family protein similar to acyl-activating enzyme 13 (AAE13) [Arabidopsis thaliana] (TAIR:AT3G16170.1); similar to putative 2-aminoadipic 6-semialdehyde dehydrogenase [Oryza sativa (japonica cultivar-group)] (GB:BAD67775.1); similar to Os06g0111600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056587.1); contains InterPro domain Pyrrolo-quinoline quinone; (InterPro:IPR002372); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873); contains InterPro domain Acyl carrier protein-like; (InterPro:IPR009081); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) -0.200659044574009 -1.70016836660032 0.118263385186770 1 1.33344961320459 8.42249617148472 -0.200659044574009 0.142108140435142 AT5G65880_at 4.90164296353232 5.55740310273616 5.46735992641481 5.90206319165281 5.41468555663859 5.31654605953452 5.26500735918691 5.7067690991715 4.80287763149919 4.97063018092855 6.26449055291545 6.2823605974882 6.00585135900967 6.4381591443043 6.56065585408403 6.27239429279617 5.97021542251033 6.0143890144772 4.78526215701962 0.161268387042706 0.160302580990899 0.166810684242133 0.163126249714185 0.154904196183248 0.157955242486735 0.160490518793528 0.154943080508719 0.169831696656816 0.164145604294835 0.153777892082899 0.168177356450251 0.156875185973704 0.159254849222554 0.167714845569433 0.162668213862021 0.161852285288271 0.163830257700646 0.160917480232385 5 5|0 +|/ 26370328 26370783 26370560.667 26370221 26370987 + gene protein_coding_gene TRUE TRUE AT5G65880.1 similar to Os03g0675700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050887.1) -0.212443117558429 -1.69974150421857 0.118345560759447 1 1.33288054368719 10.9809285837821 -0.212443117558429 0.157067780576835 AT5G66610_at 2.70220587131019 3.01329817713625 3.04521862215755 3.16725209082741 2.93452380209069 2.88961239799765 2.62404045556074 2.57688669169858 2.88609218248975 2.67667886076827 3.39167157000582 3.02692614137021 2.94779955692878 3.0888660285126 3.15065267331960 2.5911182149155 3.15297093455372 2.94105677672223 2.87987224874512 0.165333030103149 0.165594244099342 0.16899617803751 0.163048855226085 0.170657459912037 0.162367806820172 0.170984804404601 0.162367806820172 0.164870536786589 0.162698925110686 0.162367806820172 0.168057112459937 0.162367806820172 0.163404651551922 0.165373414531268 0.164680469562413 0.167004831960954 0.168004619567914 0.162703901755280 5 5 + 26604184 26604917 26604612.636 26602006 26605093 + gene protein_coding_gene TRUE TRUE AT5G66610.1 zinc ion binding similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G66620.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34242.1); similar to Os06g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056985.1); similar to putative LIM domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAW34243.1); contains InterPro domain LIM, zinc-binding; (InterPro:IPR001781) -0.148214042018034 -1.69931639671049 0.118427449461389 1 1.33231388942126 5.79442834745177 -0.148214042018034 0.0589177054878761 AT5G03630_at 9.17342083326269 9.45660314807315 10.0952474053699 10.0581720543699 10.0899910045214 9.23957663740611 8.5286174774856 8.2960365257548 7.34893752711322 8.2333686211519 8.96138488610327 9.4370272477258 8.83326138997275 8.72342080496558 8.85798149843665 9.02510551747032 8.40487334293536 8.91831356086227 8.09190986981946 0.177667685647545 0.171441364309145 0.170934123235673 0.176172770384316 0.170721426954806 0.178934588010533 0.171899079219521 0.179281067684097 0.199315273807005 0.177940957584838 0.171583895698073 0.170721426954806 0.170721426954806 0.174377212814956 0.180065127819248 0.170721426954806 0.195067976582626 0.189326651714647 0.178209663591317 5 5 - 922388 923057 922726.818 922165 924677 - gene protein_coding_gene TRUE TRUE AT5G03630.1 monodehydroascorbate reductase, putative Identical to Probable monodehydroascorbate reductase, cytoplasmic isoform 4 (EC 1.6.5.4) (MDAR 4) [Arabidopsis Thaliana] (GB:Q93WJ8;GB:Q8LBB1;GB:Q9LZS5); similar to ATMDAR1 (MONODEHYDROASCORBATE REDUCTASE 1), monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] (TAIR:AT3G52880.1); similar to MDHAR (MONODEHYDROASCORBATE REDUCTASE), monodehydroascorbate reductase (NADH) [Arabidopsis thaliana] (TAIR:AT3G09940.1); similar to Monodehydroascorbate reductase (MDAR) (Ascorbate free radical reductase) (AFR reductase) (GB:Q43497); similar to monodehydroascorbate reductase [Mesembryanthemum crystallinum] (GB:CAC82727.1); similar to Monodehydroascorbate reductase, seedling isozyme (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) (GB:Q42711); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.215010387537073 1.69881473065660 0.118524151132110 1 1.33164528243177 17.7604963209907 0.215010387537073 0.160378385175845 AT5G27730_at 7.20964466183915 6.99727333278556 7.90133186065289 7.51745181422475 8.32479941313686 8.14011060002722 7.40625074117265 7.03187588291723 6.88791758434451 6.85620267535483 7.73415583794955 7.8067626161365 7.62349686975899 8.0851815739557 7.34161008236483 8.0928891145438 7.86798265089837 7.68329942286788 7.14874444379077 0.172885777803042 0.171030151523955 0.169326258113823 0.172770031828716 0.174839627660562 0.172945171989829 0.168052038786934 0.165975771984136 0.184902097515925 0.166401738457114 0.169936741315558 0.169021302065265 0.171409881069353 0.172254072965202 0.186928878389115 0.174828532019193 0.185968243424968 0.168303596250466 0.167756326629554 5 5|0 +|/ 9821842 9822794 9822335.111 9820253 9823090 + gene protein_coding_gene TRUE TRUE AT5G27730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47900.1); similar to Os01g0931100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045294.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92860.1) -0.173605082370566 -1.69850635393528 0.118583629332491 1 1.33123433854798 14.9379475411226 -0.173605082370566 0.104799133039508 AT5G27360_at 3.61366895012570 4.45866366253396 5.0806574951238 5.20507535771243 5.66168455572959 5.31210985373242 5.75300415477462 5.70349992439371 5.2971115823108 5.98184854773566 7.32711598701124 6.25146578656114 6.15340576144859 7.00746111448951 6.6077994032505 6.52146891863443 7.1982121859869 7.12938351797005 5.6401480287836 0.221156660154866 0.224740019585647 0.229254608718560 0.218903127785679 0.21770175527088 0.225763638055391 0.229343697686379 0.225829288017855 0.231821610084084 0.220495943069233 0.219990367782884 0.218371960165487 0.220146555838005 0.221931454335073 0.228655413205780 0.215402304197730 0.233866828814702 0.215139120144209 0.219599776591084 5 5|0 +|/ 9660426 9662383 9661351.8 9657029 9662562 + gene protein_coding_gene TRUE TRUE AT5G27360.1 SFP2 (SFP2); carbohydrate transporter/ sugar porter Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence. Identical to Sugar transporter ERD6-like 18 (Sugar-porter family protein 2) (SFP2) [Arabidopsis Thaliana] (GB:Q94CI6); similar to SFP1, carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G27350.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G05160.1); similar to carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G05165.3); similar to Os03g0363600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050166.1); similar to putative sugar transporter [Solanum lycopersicum] (GB:CAC00697.2); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.214602767366235 -1.69842716952716 0.118598906359318 1 1.33112882355904 11.3056663962803 -0.214602767366235 0.159937435772076 AT5G46620_at 6.78719087794525 6.96405185054564 7.83311150749406 7.9592015146098 8.60415022691312 8.07559517738704 7.07999861007224 6.98093486561174 6.43031071183468 6.65399282340547 7.78415224964597 7.8099055713846 8.06556661568838 7.9807275584213 7.28446315318145 7.98155272118868 7.66306852819827 7.7146437377884 6.75131705109067 0.197278598675389 0.188713927099216 0.198594911224278 0.200381381766408 0.194776218680917 0.197123399749613 0.200446624746947 0.192590561550181 0.217974113070322 0.194769757671989 0.196612223728159 0.188713927099216 0.188713927099216 0.190586354760054 0.196683317237806 0.188713927099216 0.207535062888927 0.191006999989562 0.196575507757717 5 5|0 -|/ 18935079 18936307 18935833.778 18934840 18936647 - gene protein_coding_gene TRUE TRUE AT5G46620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17960.1); similar to Os02g0128100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045767.1) 0.170584586758452 1.69711582856080 0.118852160095257 1 1.32938181459111 14.7342211016794 0.170584586758452 0.100366119272337 AT5G51600_at 1.57797086449039 1.14243377548968 1.50662766987649 1.84750501470016 1.31662812188267 1.60162332858273 1.31270115796274 1.34501582167457 1.69779034182488 1.72349270993277 1.62578106965725 2.03456814539778 1.89860133450316 1.64691518445509 2.60471515636873 1.82977444685209 2.13405536162668 2.23358447190552 1.48506923641743 0.178813785736237 0.189097449815208 0.185773187896279 0.183654302379619 0.18473441365088 0.183795573868553 0.189692544822574 0.181002093631151 0.179714928479575 0.192482297833633 0.183418916971237 0.178690489955561 0.178690489955561 0.182493430641692 0.178690489955561 0.188593666748369 0.188113606805043 0.179617801166115 0.190519884144391 5 5 - 20978300 20978947 20978638.909 20978137 20981306 - gene protein_coding_gene TRUE TRUE AT5G51600.1 PLE (PLEIADE) Mutant has defective roots. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT5G62250.1); similar to Os01g0685900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043901.1); similar to Os05g0552900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056260.1); similar to Putative microtubule-associated protein, identical [Solanum demissum] (GB:AAT40494.2); contains InterPro domain MAP65/ASE1; (InterPro:IPR007145); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936) 0.175403865751985 1.69652323369659 0.118966764617031 1 1.32859257799327 3.27453829886783 0.175403865751985 0.107816864556387 AT5G47770_at 7.88709682338755 8.16718122470853 8.57095320723573 8.79685300003962 9.04056744063875 8.60079331285984 8.06345101212393 8.03814206954645 8.51355189207711 8.18106763328941 9.97436828759631 9.99435967936449 9.29318692059111 9.60879802088476 9.84398704027709 9.57554159771244 9.01027913801843 9.77530457955953 8.44470865500999 0.163499976485320 0.157406201515598 0.161440781438918 0.157698740653039 0.157836081436822 0.164455327159091 0.160848903220495 0.158154756952037 0.186042300782853 0.156772074399287 0.157938825605419 0.157864551113171 0.159558562622528 0.160653050904425 0.158718610505500 0.153920329290278 0.165391827484116 0.162745086284420 0.159714229758158 5 5|0 +|/ 19363525 19364551 19364128.75 19362399 19364855 + gene protein_coding_gene TRUE TRUE AT5G47770.1 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase Encodes a protein with farnesyl diphosphate synthase activity. Identical to Farnesyl pyrophosphate synthetase 1, mitochondrial precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] (FPS1) [Arabidopsis Thaliana] (GB:Q09152;GB:Q42573;GB:Q8W504;GB:Q93Y84); similar to FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2), dimethylallyltranstransferase/ geranyltranstransferase [Arabidopsis thaliana] (TAIR:AT4G17190.1); similar to farnesyl pyrophosphate synthase [Malus x domestica] (GB:AAM08927.1); similar to Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase ; Geranyltranstransferase ] (GB:P49351); contains InterPro domain Polyprenyl synthetase; (InterPro:IPR000092); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949) 0.169217462654437 1.69576107351417 0.119114307941750 1 1.32757772567240 17.4027568703806 0.169217462654437 0.0984314199754346 AT5G13310_at 5.08485753783882 4.95149625998503 5.6368484758433 5.9730595014718 6.22530158927216 6.75661770088452 4.8801501757823 5.05385225761132 4.39329158591522 3.97359000974168 5.50487943486113 5.1074586594704 5.00265113793271 5.4935859861068 5.57343710574768 5.48126241730199 5.46513179608008 4.75467674767226 4.22560353740279 0.242674674937796 0.237005045774092 0.251494008620972 0.236443944179261 0.246293926955486 0.252532345665479 0.236105095845746 0.241193106163604 0.242154350391515 0.238557967280572 0.234114470617676 0.234099158386289 0.232927121400583 0.235908740298468 0.252522411118401 0.234091806117865 0.235590536975855 0.239898088951880 0.236973135851300 5 5 + 4264423 4264943 4264642.273 4263496 4265340 + gene protein_coding_gene TRUE TRUE AT5G13310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13970.1); similar to OSJNBa0039C07.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE05150.2); similar to hypothetical protein MA4_111B14.56 [Musa acuminata] (GB:ABF72009.1) 0.180362198385814 1.69567307293237 0.119131354168893 1 1.32746056444895 10.3179631648361 0.180362198385814 0.11522014188167 AT5G52120_at 3.34318696274512 3.60748473944087 4.2329564766257 4.73060462870965 5.69431287141577 5.10188927678758 5.2762527954766 5.03014088727684 3.28845949800454 4.55175594551942 4.28072706241732 3.31736058387618 5.58467803569752 5.09235449115091 3.47960444298718 5.04501933088792 6.04069083730598 4.20963917807633 4.11342900850756 0.257620875160178 0.249511125119153 0.250702701777608 0.252869202686398 0.250244788281860 0.259189436622648 0.254144890564517 0.246906297423687 0.259200751534573 0.254882974525976 0.249805106180466 0.248822057581972 0.252046236457842 0.249306470578793 0.269931020994087 0.249010972262683 0.260466462599460 0.249528326701625 0.249800703560254 5 5 - 21193978 21197061 21194536.455 21193659 21197536 - gene protein_coding_gene TRUE TRUE AT5G52120.1 ATPP2-A14 (Phloem protein 2-A14) similar to ATPP2-A13 [Arabidopsis thaliana] (TAIR:AT3G61060.1); similar to Cyclin-like F-box; Galactose-binding like [Medicago truncatula] (GB:ABE86301.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.204307055334392 -1.69382376681066 0.119490082327434 1 1.32499920925202 8.93500727779831 -0.204307055334392 0.147761099466680 AT5G51950_at 0.579599065018575 0.299382962587270 0.38266751538886 0.169857398808744 0.359914183493135 0.829712489474851 1.48186337444975 1.60755645572761 0.75579750438058 1.33509911326210 1.37077457517885 1.40933674008718 0.913529176922677 1.57449074661703 1.47411003586017 0.93543715661896 0.843991801928406 1.46197704643608 0.653789995073915 0.19132972001732 0.197655026065270 0.196551088745683 0.191797484490008 0.193873866918430 0.190195484290432 0.193258025338296 0.190353747977919 0.194750272533824 0.196679294654859 0.193153515871283 0.188260874463297 0.200899949119136 0.188260874463297 0.195260229073155 0.188422463965041 0.202825445113617 0.191677188713274 0.188260874463297 5 5 - 21123481 21123973 21123791.091 21123135 21125831 - gene protein_coding_gene TRUE TRUE AT5G51950.1 glucose-methanol-choline (GMC) oxidoreductase family protein similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT5G51930.1); similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT3G56060.1); similar to putative mandelonitrile lyase [Oryza sativa (japonica cultivar-group)] (GB:BAD29242.1); similar to Os04g0573100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053612.1); contains InterPro domain GMC oxidoreductase; (InterPro:IPR007867); contains InterPro domain Glucose-methanol-choline oxidoreductase; (InterPro:IPR000172); contains InterPro domain Alcohol oxidase; (InterPro:IPR012132) -0.172371771284619 -1.69233146626975 0.119780264836470 1 1.32301406435431 1.79524490438278 -0.172371771284619 0.103878706572432 AT5G65010_at 8.5583395868926 8.67459181279537 9.25192761560297 9.32452058182308 10.1840564829156 10.0825908762548 10.4631442661325 10.6700968865104 9.51457886447605 10.3966577106834 11.5432337202902 11.5004407170563 10.6901236743525 10.8719556432205 10.9187243411812 10.7574965245150 10.4091742113672 11.0988064798521 10.2752995852775 0.120608339227912 0.114087201971927 0.112788592563918 0.112079986515727 0.110496998393264 0.110496998393264 0.110496998393264 0.113238823860534 0.118921739954435 0.110496998393264 0.111610838234929 0.110496998393264 0.112033659654370 0.117784991180857 0.110496998393264 0.110496998393264 0.115974008010741 0.11285043533193 0.112197341295961 5 5|0 +|/ 25988648 25989467 25989021.25 25986415 25989801 + gene protein_coding_gene TRUE TRUE AT5G65010.1|AT5G65010.2 ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) Encodes asparagine synthetase (ASN2). similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.1); similar to aspara (GB:CAJ43590.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Asparagine synthase, glutamine-hydrolyzing; (InterPro:IPR006426); contains InterPro domain Asparagine synthase; (InterPro:IPR001962) -0.142633534178457 -1.69166225821932 0.119910599604960 1 1.32212414983080 20.1691200806785 -0.142633534178457 0.0464060771507814 AT5G59560_at 4.33665015290204 4.61849369172996 5.18345852154337 5.53290092457893 6.05273009438060 5.4949217471157 4.50869106370913 4.42232922175556 4.11445499196891 4.11808678438685 5.48954357526775 5.60673683322558 5.41408147002582 5.59666971535007 5.23727974220088 5.6035487134804 5.05067673064003 4.99666841088923 4.55644255477446 0.256483365488738 0.250706147139809 0.254559702280577 0.244988138766289 0.245866643558190 0.249053824171288 0.253137234670007 0.250677671110690 0.253660067977798 0.249941701030823 0.254950311429333 0.249556592476753 0.244304785800181 0.246767376484843 0.250304797001439 0.244304785800181 0.268253043152865 0.265226363378883 0.257052088014477 5 5 - 24017982 24018537 24018251.727 24017782 24019183 - gene protein_coding_gene TRUE TRUE AT5G59560.1|AT5G59560.2 SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. Identical to Protein SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1) [Arabidopsis Thaliana] (GB:Q8GWZ6;GB:Q9LTH5); similar to PREDICTED: similar to SRR1-like protein isoform 2 [Mus musculus] (GB:XP_996537.1); similar to Os05g0118000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054477.1); similar to PREDICTED: similar to SRR1-like protein isoform 12 [Mus musculus] (GB:XP_927898.1); contains InterPro domain SRR1; (InterPro:IPR012942) 0.186695226054373 1.69137193768303 0.119967181897798 1 1.32173813963585 9.8374696401786 0.186695226054373 0.124810005343400 AT5G35460_at 9.5304459740275 9.83312349259644 10.5921774501127 10.7180627266550 10.8954409714438 10.6468958451018 10.2374166467756 10.2459690449045 9.59967439869958 9.40164300548514 10.2940027760329 10.1311786988789 10.3885964637156 10.3972889866507 9.8543191507956 10.3055019075512 10.4388848469059 10.2710226986998 9.16415597262178 0.108696320665392 0.101044096417871 0.103030496264809 0.103485085115371 0.101750167650562 0.101378577074681 0.101380208178498 0.102172040734516 0.103547565106368 0.107748112202542 0.101614894236715 0.100128985308658 0.102498854518181 0.102438653336842 0.107282147820945 0.10072588604414 0.106087855890184 0.101211393580437 0.111815549912320 5 5 + 13691080 13691727 13691340 13689769 13691969 + gene protein_coding_gene TRUE TRUE AT5G35460.1 similar to conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS] (GB:XP_652190.1); similar to Os01g0585100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043423.1) 0.153139325012430 1.68992170334748 0.120250185356963 1 1.31981044104513 20.1617368023302 0.153139325012430 0.0712070223825802 AT5G50280_at 5.39704203732376 5.29275119284994 5.82913586719682 5.7829235536174 6.40304099954064 6.2794795456365 5.446514358276 5.19681023366457 5.52510144786486 5.89618948578466 6.91470161927236 6.99597888498461 6.55845760391546 6.77389534030567 6.95429731540334 6.95884588182694 6.46872081596748 6.79181563405376 5.89892100960348 0.188562766362661 0.185643809067035 0.190722648339596 0.189438607729153 0.183888829812919 0.183223484060830 0.182761386041967 0.187560907663054 0.199147413961997 0.182761386041967 0.186938681697767 0.188975404038161 0.182761386041967 0.188162781935654 0.188316782680178 0.184913920863808 0.191766341585962 0.192774855972653 0.182761386041967 5 5 + 20478142 20478690 20478382 20476464 20478730 + gene protein_coding_gene TRUE TRUE AT5G50280.1 EMB1006 (EMBRYO DEFECTIVE 1006); binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G02860.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os05g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055108.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.144563560449723 -1.68954936142151 0.120322941880215 1 1.31931565547428 11.9912087825385 -0.144563560449723 0.0520982900296782 AT5G14910_at 10.737581442956 10.6289658491269 10.7138076534951 10.6211449088095 11.1189246373427 10.9149326052169 10.5596471032193 10.3408322362928 10.4673382548477 10.6078730828527 11.2334304071985 11.3348340760227 10.9138988257626 11.0310991203703 11.6201757834813 11.2482120593789 10.9010763765199 10.9990589503345 10.5209640385108 0.0896279507624117 0.0878833282592738 0.0906062198601792 0.0907306907062991 0.0899391571701015 0.0887749660178472 0.0878849877821368 0.0908254864966651 0.0945513256996264 0.092059566779851 0.0882358027952785 0.0890409935710633 0.0903580006183655 0.0908313594113424 0.0900351460942145 0.0875465291373573 0.0929083728071872 0.0894325685453286 0.093325525707629 5 5|0 +|/ 4823839 4825101 4824220 4823717 4825376 + gene protein_coding_gene TRUE TRUE AT5G14910.1 heavy-metal-associated domain-containing protein similar to Os05g0337400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055238.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV32180.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.146666034260031 -1.68917045575971 0.120397021486366 1 1.31881220790424 21.5506203838677 -0.146666034260031 0.0573634907277974 AT5G23090_at 6.11830315715236 6.29770305917356 7.5222731600479 7.11391793841658 7.90767274401981 7.88344716808727 5.69023802705885 5.55624093225483 5.76296217696019 5.67073921850013 6.51849495752151 6.45237166732493 6.34779511854153 6.34179496042951 6.10114918171278 6.92292772129191 6.71492250251872 6.1677481307404 5.75319156271625 0.213840761764848 0.225063641489791 0.219419157929191 0.230354013272729 0.237737638196138 0.225555463053624 0.221809908398994 0.214064626244780 0.229178310238102 0.230703487186878 0.2232217921787 0.218246071920592 0.232500072475572 0.229191721025924 0.222387749692251 0.218952627434169 0.223910345096241 0.217665635654948 0.226212805993233 5 5|0 +|/ 7749415 7750180 7749946.444 7749073 7750547 + gene protein_coding_gene TRUE TRUE AT5G23090.1|AT5G23090.2|AT5G23090.3|AT5G23090.4 TATA-binding protein-associated phosphoprotein Dr1 protein, putative (DR1) Identical to Dr1 protein homolog (DR1) [Arabidopsis Thaliana] (GB:P49592); similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G08190.1); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124)|Identical to Dr1 protein homolog (DR1) [Arabidopsis Thaliana] (GB:P49592); similar to TATA-binding protein-associated phosphoprotein Dr1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G08190.2); similar to repressor protein [Glycine max] (GB:AAL73489.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.157926533225604 1.6876099492464 0.120702546236886 1 1.31673942158269 12.8486569479776 0.157926533225604 0.0807036879574661 AT5G46750_at 8.27950210627351 8.6078339754875 9.0126684355674 9.01951986325226 9.38734303311793 8.79526958982468 8.37448516640626 8.27007633223523 8.41724466683434 8.04033756792008 8.93102321658592 8.9280468640315 8.86262564295292 8.93932806506533 8.87636332535949 8.77380868195505 8.32393346137078 8.76225314227547 8.07613483792507 0.119951185115400 0.117858871317905 0.126159965390504 0.125081385885257 0.122181642986480 0.121849195103814 0.119918938911725 0.121800405376684 0.128627336385742 0.118702156246000 0.118655892159986 0.116678272159948 0.118726323032817 0.113889680985748 0.116654077508846 0.116262878994490 0.137129542152094 0.123952931383030 0.126042842275808 5 5|0 -|/ 18987209 18987961 18987623.7 18986976 18989159 - gene protein_coding_gene TRUE TRUE AT5G46750.1 AGD8 (ARF-GAP DOMAIN 8); DNA binding A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. similar to UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20), DNA binding [Arabidopsis thaliana] (TAIR:AT4G17890.1); similar to Os03g0854100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051935.1); similar to Os10g0574800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065477.1); similar to putative zinc finger protein [Oryza sativa (japonica cultivar-group)] (GB:AAW39027.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) -0.181750352460734 -1.68691255535644 0.120839310461692 1 1.3158134223231 17.2071265581920 -0.181750352460734 0.118552035000426 AT5G61510_at 8.0690236013244 8.28631085731 9.01366959868535 9.29123560871885 8.74285731714505 8.84999242677686 7.81498253672816 7.94668268641807 7.30923775410812 7.32192757928088 8.58125966375112 8.35691954137172 7.89463426455246 8.2875784848076 8.62443572160523 8.38211493228108 8.40593610089319 8.52307269824155 7.09241081629435 0.172296320911024 0.172367988656023 0.181147255015707 0.174902329055577 0.168328501726511 0.188503378094692 0.175581990757978 0.174193164553816 0.211710900301319 0.180778048093402 0.176544519193124 0.171712526421938 0.185788935398414 0.180434788461776 0.175161664916013 0.169081989863563 0.181544587410529 0.181705007243511 0.179854638485092 5 0|5 /|- 24754328 24754915 24754553.7 24754171 24756224 - gene protein_coding_gene TRUE TRUE AT5G61510.1 NADP-dependent oxidoreductase, putative similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G21580.1); similar to Ted2 [Vigna unguiculata] (GB:CAA69914.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.151075308204344 1.68611487431497 0.120995911996995 1 1.31475451480002 16.3134373170546 0.151075308204344 0.0677082874524988 AT5G54270_at 14.244808318353 14.3010925610800 14.6043890881887 14.5257575456812 14.4604392985300 14.5047961396539 14.5648915097219 14.4902978184774 15.0121609036689 14.9169654320132 15.3501000153002 15.2919182883166 15.2454275841235 15.1241024314841 15.1795988755078 15.1271402251294 15.0573026231703 15.2725287595668 14.8706561403054 0.0460909554247796 0.0449755376820835 0.0457388104767656 0.0463953862593004 0.0436134394070691 0.0461979067841123 0.0440965661960528 0.0451636554961023 0.0505961975940864 0.0467409391548905 0.0448896852756377 0.0436134394070691 0.0439506923056245 0.0443853867508493 0.0456420320212403 0.0436134394070691 0.0468722845150909 0.0480411402488675 0.0459459472926485 5 5 + 22055947 22056542 22056265.818 22055499 22056794 + gene protein_coding_gene TRUE TRUE AT5G54270.1 LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II). similar to LHCB2.1 (Photosystem II light harvesting complex gene 2.1), chlorophyll binding [Arabidopsis thaliana] (TAIR:AT2G05100.1); similar to LHCII type III chlorophyll a/b binding protein [Vigna radiata] (GB:AAD27877.1); contains InterPro domain Chlorophyll A-B binding protein; (InterPro:IPR001344) -0.135494263484738 -1.68239438999272 0.121728725387209 1 1.30981920978025 29.5316968727878 -0.135494263484738 0.0224855110305397 AT5G17060_at 5.99476970766122 6.33377682941751 7.67458668141252 7.3094120924216 7.41484247006857 7.00640506702448 6.76622270039309 5.97037248008688 4.38499030961257 5.17486292358506 6.27102991100006 6.51912793735772 6.46534326593937 6.28403081283651 5.5503554304752 6.90054800164546 6.80108865634577 6.09923725039005 5.16579338106919 0.234775142036731 0.228383427396266 0.24291055747592 0.239023315344131 0.232420081547347 0.235232115877163 0.231275489837877 0.23999358357947 0.250823443264831 0.235113364991598 0.238065456832638 0.239467268482596 0.238070116417867 0.242297000817119 0.234957278663747 0.229821596986901 0.235163913302041 0.233778710263248 0.234084341456915 5 5|0 +|/ 5611081 5612607 5612217.1 5610809 5613063 + gene protein_coding_gene TRUE TRUE AT5G17060.1 ADP-ribosylation factor, putative A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins. similar to ATARFB1C (ADP-ribosylation factor B1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G03120.1); similar to ADP-ribosylation factor [Daucus carota] (GB:AAW67545.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.226737491679910 1.68229079782574 0.121749186402002 1 1.30968187679976 12.4437455183963 0.226737491679910 0.177199609637263 AT5G07190_at 0.881434782119948 0.417198711324944 1.1263769592218 0.660237202718403 0.640187752427925 1.03472567243184 0.8641785786609 0.753469728235395 1.01009742913834 1.28546461913515 0.465766208070123 0.738860449750492 0.536098374397764 0.76906462942041 0.765380098725168 0.799264664625835 1.13515758253697 0.9000751474108 1.19967007915433 0.230893417012423 0.229393672134679 0.231072234909865 0.241281011884530 0.233311227476250 0.229393672134679 0.229393672134679 0.231715740756898 0.231619251238790 0.229393672134679 0.232290697597511 0.230440030427003 0.243008638990158 0.237025261310714 0.236224599330783 0.23199222405924 0.234455508788072 0.232538010400638 0.231852364242384 5 5|0 +|/ 2237658 2238443 2238093.1 2237508 2238672 + gene protein_coding_gene TRUE TRUE AT5G07190.1|AT5G07190.2 ATS3 (ARABIDOPSIS THALIANA SEED GENE 3) Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function. similar to embryo-specific protein-related [Arabidopsis thaliana] (TAIR:AT5G62210.1); similar to Embryo-specific 3 [Medicago truncatula] (GB:ABE79354.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976); contains InterPro domain Embryo-specific 3; (InterPro:IPR010417)|similar to embryo-specific protein-related [Arabidopsis thaliana] (TAIR:AT5G62210.1); similar to CAPIP2 [Capsicum annuum] (GB:AAT35533.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2; (InterPro:IPR008976); contains InterPro domain Embryo-specific 3; (InterPro:IPR010417) -0.192358645309850 -1.68089820326672 0.122024543913237 1 1.30783614720997 1.76161905848088 -0.192358645309850 0.134127749776619 AT5G18660_at 6.89893986305784 7.39745829292306 6.6285801778564 6.73733051790298 7.68256758754241 7.15706480134608 8.47867730735224 8.3418524428224 7.31289884707392 8.03834448154783 9.88648942917567 10.5366993681118 9.23319962195608 9.75707034637447 10.2578622213007 10.0012400516306 9.16546685845523 10.0125180594391 7.75606225811662 0.219759881293577 0.214235832324501 0.228278973923222 0.231599903279907 0.216476385947637 0.230269506216597 0.212743384462577 0.213334837946322 0.234708232681315 0.230871043666809 0.227392163859472 0.226581707255695 0.216548846270124 0.222768405558899 0.234030905242065 0.224112874693465 0.228763289065612 0.218611729403261 0.223501794528860 5 5 - 6220888 6221411 6221136.091 6220783 6222230 - gene protein_coding_gene TRUE TRUE AT5G18660.1 DVR (PALE-GREEN AND CHLOROPHYLL B REDUCED 2); 3,8-divinyl protochlorophyllide a 8-vinyl reductase Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll. similar to catalytic/ coenzyme binding [Arabidopsis thaliana] (TAIR:AT3G18890.1); similar to flavin reductase-related [Arabidopsis thaliana] (TAIR:AT2G34460.1); similar to Os03g0351200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050115.1); similar to Isoflavone reductase [Chlorobium phaeobacteroides BS1] (GB:ZP_00532631.1); contains InterPro domain NmrA-like; (InterPro:IPR008030) -0.188471268756384 -1.680305091831 0.122141988938999 1 1.30705029517479 16.1946855939179 -0.188471268756384 0.128948542881620 AT5G37070_at 9.7483157320493 9.8925799111281 10.7065485822469 10.6815798233796 10.5333695332669 10.3951157149635 9.35896644550039 9.15767601659473 9.33288362957869 9.01018418641963 9.73820746790349 9.71633722648885 9.6684807008503 9.79747863957422 9.32475722504073 9.7490504346875 9.77850893194233 9.78098255132023 8.84459480172707 0.105542861378522 0.104949607241279 0.101999773914005 0.106078921160654 0.110152366849778 0.109329622220555 0.106531514388964 0.104244867497275 0.116134256621752 0.110534714686060 0.104522577821120 0.101747703825761 0.109431375188001 0.108518214491657 0.101831764713625 0.104307671529259 0.109181118993327 0.104302886558463 0.105921482482879 5 5|0 +|/ 14668340 14669341 14669014.9 14668242 14669483 + gene protein_coding_gene TRUE TRUE AT5G37070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G08890.2); similar to Protein of unknown function, DUF538 [Medicago truncatula] (GB:ABE91533.1); contains InterPro domain Protein of unknown function DUF538; (InterPro:IPR007493) 0.142388804252722 1.67657722063274 0.122882482684785 1 1.30211444053442 19.4376587714584 0.142388804252722 0.049272752630482 AT5G58720_at 7.5813836709075 7.86896388725532 8.3450148731277 8.2832491007923 8.64658233540461 8.3345806926104 6.92900519315704 7.67076477236086 7.29418695854238 7.11000672333625 7.97974023900871 7.82856472761206 7.80380076481716 8.09267852110798 7.4452140964637 8.16776933682917 7.57375866072073 7.50419835332683 7.15290249187288 0.19318253141754 0.186988073515288 0.198422142174324 0.193209745368204 0.196785437875185 0.192358933639937 0.197949834187101 0.194874101337375 0.207524152543698 0.203207670294869 0.188144136201049 0.186258652385743 0.191300690310423 0.196772357094708 0.199306347961832 0.186258652385743 0.208525573328291 0.193531919437645 0.196629004707982 5 5|0 -|/ 23737255 23738452 23737860.857 23736928 23740363 - gene protein_coding_gene TRUE TRUE AT5G58720.1 PRLI-interacting factor, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15390.1); similar to Os01g0225100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042457.1); similar to UBA-like; HSC20, C-terminal oligomerisation [Medicago truncatula] (GB:ABD28681.1); similar to Os02g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047541.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Smr protein/MutS2 C-terminal; (InterPro:IPR002625) -0.202522211657516 -1.67575262842860 0.123046818780167 1 1.30102345093517 15.4500252217368 -0.202522211657516 0.14826954475233 AT5G16520_at 5.4730145476293 5.6237312024779 6.7526919672175 6.75962272401987 7.27910393444908 6.58135139237759 6.33551518007366 5.84376487302125 6.59349187460999 5.59770260872998 7.17303539317276 6.66897991786538 6.7823631672928 6.98861504220658 6.44514594385879 6.78821480935129 5.8390095739165 6.72196552642734 5.86140634840316 0.225210647616493 0.227858957472494 0.232565981935567 0.216019906978720 0.223545840745829 0.229587071908133 0.21683789558197 0.219815488571175 0.225658236304281 0.219284642404582 0.223893401774394 0.221181681888457 0.226475353563496 0.234573875948414 0.219387714890470 0.225661388240186 0.247901169813059 0.216667975455606 0.221816158523702 5 5 - 5394743 5395615 5395113.727 5394611 5397458 - gene protein_coding_gene TRUE TRUE AT5G16520.1 similar to Os01g0100500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041736.1) -0.203875502417541 -1.67570648903492 0.123056019878634 1 1.30096241411210 12.6778243688295 -0.203875502417541 0.15001359294971 AT5G19550_at 9.9510296266349 9.86279331733318 10.8349573435814 10.7732920445161 10.3141292489795 10.0765307377600 9.64828765254797 9.66204420215918 9.17168804406112 9.26304007891386 9.93858955664585 10.0659870399743 9.84557485183432 9.98158248806418 10.0343909809142 9.87603680476676 9.9700415570093 9.97027680994533 8.65680389429982 0.100891609957535 0.101102395102895 0.104210426188372 0.102319767249771 0.107368869182715 0.104127712618336 0.103019395537438 0.101242117731774 0.109100785511765 0.106342390046346 0.101496764742456 0.098757695892826 0.100984862968181 0.098757695892826 0.099843433310283 0.098757695892826 0.102611524959030 0.102977321195671 0.113895161843685 5 5|0 +|/ 6600061 6601566 6600697.1 6598019 6601821 + gene protein_coding_gene TRUE TRUE AT5G19550.1 ASP2 (ASPARTATE AMINOTRANSFERASE 2) Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. Identical to Aspartate aminotransferase, cytoplasmic isozyme 1 (EC 2.6.1.1) (Transaminase A) (ASP2) [Arabidopsis Thaliana] (GB:P46645); similar to ASP4 (ASPARTATE AMINOTRANSFERASE 4), catalytic/ transaminase/ transferase, transferring nitrogenous groups [Arabidopsis thaliana] (TAIR:AT1G62800.2); similar to ASP3 (ASPARTATE AMINOTRANSFERASE 3) [Arabidopsis thaliana] (TAIR:AT5G11520.1); similar to aspartate aminotransferase (GB:AAA79370.1); similar to aspartate aminotransferase glyoxysomal isozyme AAT1 precursor [Glycine max] (GB:AAC50014.1); similar to aspartate aminotransferase cytosolic isozyme AAT2 [Glycine max] (GB:AAC50015.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.140854496994737 1.67547722791411 0.123101748160672 1 1.30065914300562 19.6357933634736 0.140854496994737 0.0452035711294814 AT5G35910_at 6.07696897189876 5.92960021089895 7.07039314954482 7.16265050693207 6.99958835275581 6.66266959798865 6.29780095604835 5.84251099004419 4.60992577793407 4.83809364404129 6.40295417687457 6.30169034376289 6.37026305370347 6.21530614035213 6.26588525972557 6.6591800138208 6.96077016352723 5.96602001208781 5.31323498897436 0.18258641747614 0.180004378758712 0.196414397033198 0.177568257524215 0.177873437600865 0.191670994386286 0.177568257524215 0.185553580525502 0.189991153205092 0.196483382128077 0.182105194959657 0.180336376202865 0.181928591449516 0.179504874731365 0.180124409281654 0.183784121364533 0.182405973141628 0.179412671433395 0.181170732790996 5 5 - 14047125 14047660 14047432 14046916 14052635 - gene protein_coding_gene TRUE TRUE AT5G35910.1 3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein similar to 3'-5' exonuclease/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G54440.1); similar to Nucleolar protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53938.2); contains InterPro domain HRDC; (InterPro:IPR002121); contains InterPro domain 3'-5' exonuclease; (InterPro:IPR002562); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.169711792244805 1.67472351174853 0.123252191048544 1 1.29966227161674 12.1618612332465 0.169711792244805 0.102531371976702 AT5G35640_at 2.26466388630932 2.28026531474007 2.71012365226083 2.42446357713325 1.95728594430955 2.28872716993232 2.14387319928831 2.5453514243154 2.59974051557196 2.40777307953264 2.87366115696812 2.18393477934329 2.55759750133448 2.48631025847092 2.58531776255246 2.60751168745795 2.7471297459793 2.21826019770989 2.20021396769717 0.243736584424381 0.255659187206009 0.260808316549533 0.248080640509943 0.256735543016628 0.246579181376937 0.256037488319574 0.251083890301489 0.271181875689384 0.247519307040813 0.248255176072295 0.255928147209919 0.247655328109745 0.249199105383149 0.268457923398471 0.249977020570369 0.256267733584054 0.249855495928231 0.248201527582538 5 5 + 13851956 13852812 13852200 13851863 13852836 + gene protein_coding_gene TRUE TRUE AT5G35640.1 similar to zinc finger (CCCH-type/C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G01350.1); similar to Os12g0162900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066226.1); similar to Os07g0637200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060400.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96170.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) -0.169720166547386 -1.67309992602569 0.123576819837444 1 1.29751573319539 4.79436489128328 -0.169720166547386 0.102801336076989 AT5G45500_at 10.2071113736644 10.3829338676944 10.4876963209233 10.5605101102806 10.2101437418125 10.2528356193622 8.82188137901488 9.15866128854073 10.0906195174335 9.2806746142065 10.0601575780754 10.0099989473970 9.76957701460575 9.9254975928794 9.49131166960681 10.0063494977694 9.86927868774906 10.0298001515772 9.34977443537785 0.0946647252136557 0.0951177427555218 0.0980410113793417 0.095842050267449 0.0913793414599582 0.0972769410562227 0.0982080392211256 0.102864676883725 0.0954818028190975 0.0975396495368286 0.0913793414599582 0.0923373706920853 0.0989483989258445 0.095097903554589 0.0994207514799628 0.0941693173266067 0.0981308378744638 0.0973366870442562 0.0995526020132704 5 5 - 18449880 18450386 18450118 18449685 18451475 - gene protein_coding_gene TRUE TRUE AT5G45500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45520.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN08222.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97474.1); similar to Os01g0799000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044526.1); contains domain no description (G3D.3.80.10.10); contains domain L domain-like (SSF52058) -0.149686045911102 -1.67252220655338 0.123692516550020 1 1.29675220550152 19.7446896700600 -0.149686045911102 0.0673488868643965 AT5G43590_at 1.21489394454050 0.823594984259213 1.33677081808622 1.52425583447093 0.921090495616554 1.26837318528459 1.18511511668049 1.10102752900909 1.27717724621287 0.711361024454254 0.9998344234572 1.17019066183447 1.35314907538381 1.2128375686771 1.2838936981665 1.26869652553886 1.63707958208938 1.10336204317899 0.874128291812792 0.210730137350099 0.214281945795906 0.210776857391296 0.210730137350099 0.211138690331062 0.211218857355415 0.210730137350099 0.210730137350099 0.214110255118145 0.218294281075837 0.213513619069564 0.212337103327536 0.217141706407481 0.214893985059628 0.215561037324939 0.210730137350099 0.212024410904404 0.212796587609059 0.212430939471358 5 0|5 /|- 17526595 17527248 17526871.889 17526595 17528704 - gene protein_coding_gene TRUE TRUE AT5G43590.1 patatin, putative similar to PLA IVB/PLP5 (Patatin-like protein 5), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT4G37060.1); similar to patatin-like protein 1 [Nicotiana tabacum] (GB:AAF98368.1); contains InterPro domain Patatin; (InterPro:IPR002641) 0.166066436340661 1.67140019240337 0.123917492828661 1 1.29526973605311 2.27581655588550 0.166066436340661 0.0972717307988332 AT5G08060_at 8.5443832587049 8.6443716947377 9.23805926945563 9.40525970523539 9.12492643614504 9.16380752965874 8.550507960041 8.94004103566685 8.5514177604676 8.44438771415393 9.26439753012106 9.22565304420979 9.24728305364274 8.92378269827645 9.28764028566755 9.13059362762242 9.02180338868656 9.10880217731522 8.32110673549989 0.108203799535757 0.103503444510867 0.105620555508930 0.106836033717347 0.105267442241318 0.104141058218637 0.103503444510867 0.103503444510867 0.109111799437487 0.106247511482405 0.103808122942133 0.106792327102955 0.105944347547474 0.111323197901474 0.104253749512530 0.105707029343278 0.111943073920754 0.105909705753295 0.114387709200305 5 5 + 2580590 2580923 2580753.909 2580452 2582565 + gene protein_coding_gene TRUE TRUE AT5G08060.1 similar to Os01g0763300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044334.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87355.1) -0.15362772711701 -1.67029122776976 0.124140211801925 1 1.29380504201777 17.7465272174056 -0.15362772711701 0.0756708958408089 AT5G39390_at 1.38754938279523 1.67415615291654 1.73175318397764 1.90182994546993 1.62653502283310 1.60022073269719 1.99189648061391 1.58117593543564 1.90145220031964 1.88872675579812 1.90818711772486 1.62505006063619 2.02273762122411 1.90004566389022 1.66512507265384 1.52660917675801 1.76940523260793 1.81830400476349 1.88417753521055 0.192736911565636 0.197596666176963 0.194494476455411 0.200397717349172 0.187899635576523 0.18684140804297 0.185651107626560 0.191261591390703 0.185651107626560 0.185651107626560 0.185651107626560 0.188066203551631 0.193384497679601 0.195914639737457 0.185651107626560 0.187143741368317 0.185673743744096 0.192811144412822 0.194973630356161 5 5 - 15780947 15781604 15781297.182 15780943 15782697 - gene protein_coding_gene TRUE TRUE AT5G39390.1 leucine-rich repeat family protein / protein kinase family protein similar to EFR (EF-TU RECEPTOR), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G20480.1); similar to Os02g0215700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046291.1); similar to putative protein kinase Xa21 [Oryza sativa (japonica cultivar-group)] (GB:BAD17689.1); similar to Os02g0215500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046288.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.162496249265267 -1.66980026677020 0.124238928159790 1 1.29315676203384 3.52233218337162 -0.162496249265267 0.0916460237095994 AT5G24290_at 1.83985858474141 2.27711259322656 1.63091753677383 2.26898409354034 2.59261910404601 1.81827818348140 1.30645661611866 0.899972210490252 1.08036902833473 1.18436044202346 1.22903270819952 1.42018523960062 1.53905162657071 1.62294361095185 0.850827846698888 1.25824747094673 1.40317398813998 1.46659460721396 1.14497912890303 0.201412973292121 0.202612473660029 0.201218400445088 0.207800725502400 0.206691931066208 0.209680386296721 0.201218400445088 0.201218400445088 0.209387493852342 0.207819260205277 0.203418374937724 0.208415678123362 0.205583397007617 0.205067025392907 0.20913660878812 0.201218400445088 0.201218400445088 0.212836124565377 0.218386180699793 5 5 - 8263389 8263864 8263584.545 8263135 8265744 - gene protein_coding_gene TRUE TRUE AT5G24290.1|AT5G24290.2 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G27870.1); similar to Os06g0103800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056545.1); similar to integral membrane protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67955.1); contains InterPro domain Protein of unknown function DUF125, transmembrane; (InterPro:IPR008217) 0.246093697518992 1.66951588522304 0.124296140152026 1 1.29278130354158 3.07193820049099 0.246093697518992 0.202048522359894 AT5G20900_at 10.7743557419798 10.7867529468593 11.3193038078325 11.3034420153663 11.6425634660154 11.2215866894632 10.6026098337197 10.5151020014822 9.79250272024406 9.67055914597884 10.3306289225662 10.2695905176448 10.5968289945688 10.5401498362035 10.4890793717147 10.4772155473073 10.7050957794993 10.7393822707541 9.58105243969317 0.0851888759279905 0.089691824903555 0.0908725885707281 0.0902018545476323 0.0903193804917014 0.0943805339514794 0.0864882669108343 0.0932598094222185 0.0933067167278867 0.0914240420144493 0.0851978453716676 0.0855751996811481 0.0886734678695582 0.0852587710454513 0.0871300618129871 0.086328118964976 0.092566196462267 0.0834241308979694 0.094410427342745 5 5|0 +|/ 7090905 7092152 7091556.1 7090744 7092541 + gene protein_coding_gene TRUE TRUE AT5G20900.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G43440.1); similar to ZIM motif family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96481.1); similar to OSJNBa0060D06.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE03550.1); similar to Os04g0653000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054103.1); contains InterPro domain ZIM; (InterPro:IPR010399) 0.152942514963210 1.66946457119095 0.124306466035713 1 1.29271355923598 21.1206484830086 0.152942514963210 0.0744908074910214 AT5G13610_at 5.1757126379789 5.49902302595906 6.95004167481216 6.75766622518642 6.57370583443807 6.17506723550729 5.35469572174389 5.66581942679877 5.05753497138681 4.77282665048156 6.14499863860895 6.12950636699623 6.3146294513567 6.24451024318835 6.20601402308881 6.1108481627194 5.89047988056509 6.53592748840621 5.21036128042447 0.193296558115440 0.182201654765714 0.192706850554268 0.195199242759280 0.181275374808088 0.189462220828758 0.197780261716818 0.187729454830149 0.186947570369762 0.187907191258963 0.183678279053686 0.188007012270802 0.204864811241935 0.185056815304509 0.184796432829329 0.183528952598461 0.189700227055643 0.183898638752161 0.182385566453033 5 5|0 +|/ 4383877 4384787 4384391.778 4383016 4385032 + gene protein_coding_gene TRUE TRUE AT5G13610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69380.1); similar to Os07g0694800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060742.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL53488.1); similar to Os01g0764300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044340.1); contains InterPro domain Protein of unknown function DUF155; (InterPro:IPR003734) 0.17338053995996 1.66893695231249 0.124412682840127 1 1.29201706775730 11.6243107641183 0.17338053995996 0.109072307933992 AT5G24100_at 1.56152118108542 1.88067696382204 1.78397705770303 2.36854907617578 1.44809318816073 1.54456550950725 1.20281307964319 1.81808888149078 2.27657527240806 2.01294390270571 1.73897641487342 1.61393527209707 1.71516659588743 1.53913398613050 1.40971536220379 1.72066807037961 1.80006652543532 1.91236648286793 1.70489907487505 0.206741652015655 0.207025778913556 0.214119768730124 0.226329691606168 0.209044120447658 0.211994002985873 0.206741652015655 0.213594912077553 0.215744223226104 0.210419875081454 0.217881799399945 0.206741652015655 0.206741652015655 0.211323633357396 0.212203759893218 0.206757012236792 0.212527763488248 0.214976450057974 0.218511495521216 5 0|5 /|+ 8150632 8151115 8150814.7 8148619 8151311 + gene protein_coding_gene TRUE TRUE AT5G24100.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G53320.1); similar to putative receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAA94519.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.209125941637049 -1.66856201273503 0.124488212510924 1 1.29152219613802 3.54073211989719 -0.209125941637049 0.157798534158836 AT5G63510_at 9.05090559814372 9.26320760945243 9.45258452213506 9.65566104672352 9.67476443588527 9.24804266497656 9.3274776254004 9.3089672252295 8.31098200406125 8.46213853616028 9.334645064911 9.62001288441222 9.2909265059106 9.31891596502791 9.51230483903361 9.20446550739135 9.08195954063383 9.34414043333455 8.46903985234061 0.124678375487963 0.124215096839769 0.131422189549044 0.126256057004217 0.125147868730358 0.135789359338521 0.126616549207691 0.128419679973314 0.155883181023332 0.132694493190533 0.127939957061943 0.124405034579718 0.129995494869028 0.124329951260247 0.128634812145421 0.124215096839769 0.138090914307075 0.136800719815983 0.124956046861068 5 5|0 +|/ 25441443 25442774 25442412.1 25441226 25443067 + gene protein_coding_gene TRUE TRUE AT5G63510.1 GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex. Identical to Unknown mitochondrial protein At5g63510 [Arabidopsis Thaliana] (GB:Q9FMV1;GB:Q8LBM1;GB:Q93XY3); similar to GAMMA CAL2 (GAMMA CARBONIC ANHYDRASE-LIKE 2), acyltransferase [Arabidopsis thaliana] (TAIR:AT3G48680.1); similar to mitochondrial NADH:ubiquinone oxidoreductase 29 kDa subunit [Chlamydomonas reinhardtii] (GB:AAS48196.1); similar to Os02g0508000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046924.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) -0.161185483439682 -1.66804479114297 0.124592471390419 1 1.29083963055108 18.2489387443779 -0.161185483439682 0.0897128335381728 AT5G42580_at 2.07373209974823 1.74681082988585 1.95969979615069 2.45269103080792 1.88715051702314 2.15865433630384 1.78215209059206 1.78960756468549 2.86356030617744 2.34375324059475 2.08053330486210 2.01291983508017 2.21789734223462 2.54308378550826 2.39909710576291 2.40582580960754 2.58783144972054 2.65173139310033 2.46358870569579 0.227935630106095 0.222383134894619 0.233960553495255 0.227317398621904 0.225339182635516 0.224921352283319 0.226535431053550 0.22240646048504 0.228546999404286 0.232495993914640 0.231285375532737 0.226635312016663 0.228110458431698 0.227500399620686 0.225932180270599 0.225658361739159 0.234411814715775 0.235225062128216 0.233560697319931 5 5 - 17040910 17041422 17041178.273 17040874 17042457 - gene protein_coding_gene TRUE TRUE AT5G42580.1 CYP705A12 (cytochrome P450, family 705, subfamily A, polypeptide 12); oxygen binding a member of the cytochrome P450 family similar to CYP705A19 (cytochrome P450, family 705, subfamily A, polypeptide 19), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G20100.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE94646.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.175628333964199 -1.6676062966646 0.124680921939751 1 1.29026105006410 4.44097849351159 -0.175628333964199 0.112643536838438 AT5G65820_at 1.26792206391438 1.53061076321722 1.82248313605656 2.08125789664985 1.9477622673295 1.71272573679999 1.92825425968591 2.06522927735738 1.41340849580521 1.78421485929538 1.70992506100458 2.12446035364085 2.07280010355080 2.31112599523763 2.02216218250167 2.05768989884055 1.95324046847355 1.71664000272216 1.60127750803340 0.19532466658573 0.194322552160588 0.194688245027411 0.195027920153466 0.194794929001673 0.199687053600237 0.201120460951638 0.191067582672141 0.201643075728205 0.193210548373755 0.191067582672141 0.197259924148255 0.191560543138188 0.195018651697799 0.191303066717121 0.191067582672141 0.195770182082972 0.197110338053969 0.195531720916114 5 5 - 26357210 26357629 26357438.364 26357102 26359015 - gene protein_coding_gene TRUE TRUE AT5G65820.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G49730.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB03620.1); similar to Os03g0761300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051352.1); similar to Os03g0728200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051146.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.155255066329728 1.66717171090258 0.124768639373411 1 1.28968770918721 3.59235023977192 0.155255066329728 0.0792987107057849 AT5G04670_at 4.87393337442353 5.22246445935412 5.75518971625747 5.84174931093458 6.0254915966182 5.97493627696301 4.47115564359084 4.76641267421275 4.72707345638686 4.39975204455906 5.71841394913539 5.8167845782996 5.8210091983182 5.42350182110079 5.86193323093331 6.07485591033068 6.22965806169011 5.01387857710306 4.6121763657706 0.223554285324040 0.218265419859601 0.21684426038636 0.218644816389259 0.229715218168278 0.228785181725905 0.217242340949385 0.228097135933602 0.244423492605616 0.229339814685661 0.218539129397516 0.218433808406953 0.220018999939237 0.220619314184103 0.219830253879014 0.222109244408756 0.223677011533167 0.217943386454278 0.224894868090200 5 5|0 -|/ 1338000 1338995 1338590.556 1337840 1340885 - gene protein_coding_gene TRUE TRUE AT5G04670.1 similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT4G32620.1); similar to Os01g0179500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042200.1); similar to Os02g0100200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045580.1); contains domain ENHANCER OF POLYCOMB (PTHR14898) 0.156083612708586 1.66660409599897 0.124883290600716 1 1.28893898871400 10.5287524839290 0.156083612708586 0.0809294784202687 AT5G45430_at 9.90406449558006 9.67172573832369 10.5935412796018 10.3441059450975 10.6385581749313 10.1653082892442 10.3275975301353 10.1377508440238 10.2119831301718 10.1609745182765 10.7715058297888 10.5317310743270 10.8816682962867 10.8315963853845 10.3683000682007 10.9462418013294 10.8269741817427 10.5901771527999 10.2738498651226 0.065554162290832 0.0660470354972553 0.0655731205873161 0.064767395657293 0.0631283250564162 0.0632789422730295 0.0631283250564162 0.0631283250564162 0.0699114367448148 0.0644740233573442 0.0639668276903741 0.0631283250564162 0.0640960557990935 0.0652450268168805 0.0634688311133239 0.064282014061004 0.0680140189845384 0.0641031543647228 0.0655395332732413 5 5|0 +|/ 18428268 18428868 18428521.8 18424615 18429204 + gene protein_coding_gene TRUE TRUE AT5G45430.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G19110.1); similar to Os06g0116100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056617.1); similar to GAMYB-binding protein [Hordeum vulgare subsp. vulgare] (GB:AAO25540.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.171126538790785 -1.66572717988121 0.125060601805439 1 1.28778255476362 20.6898949637452 -0.171126538790785 0.106144246164859 AT5G08565_at 3.27941808960298 3.65176407528876 3.12342623469814 3.36947343459222 3.01529102540620 3.61506084451192 2.90304083649164 3.24003753796620 2.77110068050533 2.77519615286578 3.31586669455667 2.99819259876246 2.80241280260504 3.39878155973287 3.7676555983613 3.5505669048883 3.18957764051457 3.13631937966613 2.62018690762243 0.206663380483002 0.204046174494091 0.202506753961992 0.205854092149306 0.204840973400419 0.202425082796503 0.207303409851464 0.206578999251401 0.210328330660199 0.206869577061151 0.209720131105610 0.213025003992688 0.209068143310112 0.203713724829350 0.205805389099090 0.201551350037117 0.209243570044653 0.202310628631819 0.201551350037117 5 5|0 +|/ 2775993 2777119 2776524.778 2775899 2777401 + gene protein_coding_gene TRUE TRUE AT5G08565.1 positive transcription elongation factor/ zinc ion binding Identical to Transcription elongation factor SPT4 homolog 1 [Arabidopsis Thaliana] (GB:Q8LCQ3); similar to transcription initiation protein-related [Arabidopsis thaliana] (TAIR:AT5G63670.1); similar to Transcription elongation factor SPT4 homolog 1 (GB:Q8LCQ3); contains InterPro domain Transcription initiation Spt4; (InterPro:IPR009287) -0.196275954227612 -1.66428709689030 0.125352272211231 1 1.28588416821276 6.27073045701164 -0.196275954227612 0.141912355205133 AT5G15410_at 9.0492814704416 9.21091921435076 9.7913634354451 9.78051550024736 10.3549927578974 10.1722833824454 10.0216468686761 9.70554754625934 10.5720084580106 10.0146792763336 11.2030604819960 10.4376800208805 10.7195666792338 10.9222419152986 10.5760774717906 10.7599040932637 10.1160233929072 10.9052438835319 10.0772340460597 0.112788964638201 0.114714193405816 0.106444981183887 0.107213002142000 0.108366906106175 0.112169673741775 0.106862543601684 0.104065704070123 0.114609139986576 0.107724812795980 0.104554167801359 0.104889594303417 0.102018687285373 0.105745226896981 0.103535491064392 0.102018687285373 0.114701250649508 0.107726475424419 0.103319602318955 5 5 - 5003468 5004135 5003751.455 5003310 5006903 - gene protein_coding_gene TRUE TRUE AT5G15410.1|AT5G15410.2 DND1 (DEFENSE NO DEATH 1); calmodulin binding / cation channel/ cyclic nucleotide binding / inward rectifier potassium channel|DND1 (DEFENSE NO DEATH 1); cation channel/ cyclic nucleotide binding / inward rectifier potassium channel 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Identical to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic nucleotide- and calmodulin-regulated ion channel 2) (DEFENSE NO DEATH 1) (CNGC2) [Arabidopsis Thaliana] (GB:O65718); similar to ATCNGC4 (DEFENSE, NO DEATH 2), calmodulin binding / cation channel/ cyclic nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G54250.2); similar to putative cyclic nucleotide and calmodulin-regulated ion channel protein [Oryza sativa (japonica cultivar-group)] (GB:AAK16188.1); similar to cyclic nucleotide-gated ion channel 2 [Hordeum vulgare subsp. vulgare] (GB:AAY58313.1); similar to CNGC2 [Gossypium hirsutum] (GB:AAX18166.2); contains InterPro domain Cyclic nucleotide-binding; (InterPro:IPR000595); contains InterPro domain Ion transport; (InterPro:IPR005821) -0.149748111701043 -1.66373359297441 0.125464538794024 1 1.28515475252776 20.2239597732191 -0.149748111701043 0.0691235732568538 AT5G16040_at 4.946426515536 4.58044420465002 5.81156454092187 5.43956086453495 5.35639956763858 5.7908867862316 4.58367735298801 4.561578578063 3.50453041065557 4.31902670858573 4.76998114450009 4.99334963640699 4.95211049645746 4.90657239425163 5.29000483188391 4.80969825923296 5.73837728657711 4.91875319856144 3.66578617913202 0.183116840253741 0.182721267619029 0.179103915529276 0.186720062911810 0.184800488749602 0.180277364275719 0.184421271486485 0.180065230001065 0.190215762764737 0.178505180635406 0.179405313066947 0.182421434491315 0.185343809586564 0.182104256491019 0.182044378761551 0.177842858854528 0.192175993968312 0.182924251838803 0.194722111190119 5 5|0 -|/ 5240908 5241816 5241348.125 5240678 5243330 - gene protein_coding_gene TRUE TRUE AT5G16040.1 regulator of chromosome condensation (RCC1) family protein similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G02510.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96878.1); contains InterPro domain Regulator of chromosome condensation, RCC1; (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091) 0.178519839559217 1.66318848683413 0.125575189760722 1 1.2844365337922 9.57238580404136 0.178519839559217 0.117574984829696 AT5G60410_at 8.03897353041893 8.06693771833339 9.07477515593762 8.9622928530012 9.23324144237993 8.85242732391319 8.23268263794887 8.10571456172431 6.57345556901855 6.94750606265557 7.80416752831472 7.75143120184514 8.25118482362888 8.02893936586146 7.56920211012224 8.26869706960223 8.21836369243954 8.0274492209288 6.77460108682958 0.149335702960795 0.147810010072394 0.150620740338292 0.151884644779242 0.152858188869213 0.148485188068510 0.149764522566731 0.150755593952273 0.174646150599142 0.161937621276354 0.151457991885735 0.151378703673990 0.148041734848702 0.147910967049379 0.150761651500333 0.147810010072394 0.157240824202383 0.148948062310832 0.165172773833237 5 5|0 +|/ 24314489 24317852 24316391.625 24312116 24318373 + gene protein_coding_gene TRUE TRUE AT5G60410.1|AT5G60410.2|AT5G60410.3|AT5G60410.4 ATSIZ1/SIZ1; DNA binding / SUMO ligase|ATSIZ1/SIZ1; DNA binding Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Identical to E3 SUMO-protein ligase SIZ1 (EC 6.-.-.-) (SIZ1) [Arabidopsis Thaliana] (GB:Q680Q4;GB:Q56YS2;GB:Q56ZS1;GB:Q67ZL3;GB:Q9FKK4); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G41580.1); similar to putative protein inhibitor [Oryza sativa (japonica cultivar-group)] (GB:AAO38837.1); similar to Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABD33066.1); similar to DNA-binding SAP; Zinc finger, MIZ-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE89544.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) 0.151254033670391 1.66309098140791 0.125594991543653 1 1.28430807662080 15.9484391276709 0.151254033670391 0.0723059061214815 AT5G03430_at 9.94734165994201 9.72113121153535 10.6168656861505 10.6067681452452 10.6470417995113 10.4106355598697 10.3654254676541 10.1526516274659 9.71933703761724 9.6902133120176 10.0088642705218 10.0789436131662 10.3078273346311 10.2068457977206 9.96880963871125 10.4652490176851 10.3861039293115 10.0613838290815 9.6850984478159 0.063327060030396 0.0615692078726728 0.0611057624521433 0.061435092788041 0.0615108893171434 0.0617771635500999 0.0619591920460645 0.0616861823886636 0.062971149512111 0.066492411583742 0.0606193209029221 0.0599167150591232 0.0620526001640651 0.0620954836406806 0.0606329067573498 0.0599167150591232 0.0677112057991065 0.0606732484652307 0.0652371805840107 5 5|0 -|/ 849271 850617 849890.556 848863 853141 - gene protein_coding_gene TRUE TRUE AT5G03430.1 phosphoadenosine phosphosulfate (PAPS) reductase family protein similar to Os01g0259600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042640.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81409.1); contains InterPro domain Phosphoadenosine phosphosulfate reductase; (InterPro:IPR002500); contains InterPro domain Molybdopterin binding domain; (InterPro:IPR001453) -0.148879132497079 -1.66236099687893 0.125743328192914 1 1.28334650011389 20.250342492007 -0.148879132497079 0.0675653245222051 AT5G37680_at 6.9588691297697 7.10777190682388 7.99565026239154 8.29787690336154 8.37575256819994 8.11218436748463 7.7454644245977 8.08341119989183 6.33950626784483 7.04359510224577 7.76274411080438 7.77461465906508 7.83714346565863 7.74221825884277 7.6458465338275 7.82030469820155 7.73625666813036 7.54549381925276 7.11267448628358 0.200120075393579 0.195486741559852 0.203324111174572 0.196389676210546 0.201190135961083 0.201933089473307 0.201977659268201 0.199906107890646 0.210209802786046 0.209596900465252 0.194375504666456 0.192558490365647 0.200419637417906 0.195461718876137 0.194866991128957 0.200042008731149 0.204681796481317 0.204690609747721 0.207020361155014 5 5|0 -|/ 14987027 14988304 14987382.625 14986826 14988542 - gene protein_coding_gene TRUE TRUE AT5G37680.1 ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. similar to ATARLA1D (ADP-ribosylation factor-like A1D), GTP binding [Arabidopsis thaliana] (TAIR:AT5G67560.1); similar to Os02g0732500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048027.1); similar to PREDICTED: similar to ADP-ribosylation factor-like 10C [Danio rerio] (GB:XP_690918.1); similar to Os03g0200800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049292.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Ras GTPase; (InterPro:IPR001806) -0.163264869333819 -1.66116288302069 0.125987130002231 1 1.28176878063859 15.1171241264056 -0.163264869333819 0.0943408573338464 AT5G66815_at 1.00121588531494 1.23085061033395 1.24988809170842 1.45887593872543 0.863207141456102 1.29665909627341 1.08379164806339 1.36990595456777 1.30936670605415 1.4717563737426 1.69009476795652 1.24227633172390 1.15868618155846 1.18426207733981 0.9808550829496 1.28488862553781 1.43852528743019 1.05303136317453 1.62983571397876 0.191664545917131 0.187764638891895 0.189635785929591 0.200024530933989 0.187764638891895 0.193923560086144 0.188599623412315 0.187963362689127 0.195074661882083 0.193613897961540 0.193891897744279 0.187764638891895 0.190034075683796 0.191259756224911 0.192894255624413 0.190916535299812 0.187764638891895 0.195131837020109 0.188970807463951 5 5 + 26694697 26694985 26694860 26694591 26695091 + gene protein_coding_gene TRUE TRUE AT5G66815.1 unknown protein -0.169726851766631 -1.66108664173492 0.126002658451844 1 1.28166840454693 2.55649782712244 -0.169726851766631 0.104715950581216 AT5G44360_at 1.58436540720911 1.77042375630960 1.60555365747175 1.87162541736421 1.46213060342182 1.67203210593223 1.96354086553502 1.65099528482681 2.0704578645306 1.57734479667094 1.70201022266879 1.93155142876714 2.17797461272566 2.20607380339411 2.14794755272339 1.51742890007817 1.88337968729387 2.16388548264757 2.07849152038607 0.227598411770212 0.222660322581062 0.228448812556450 0.231622602540473 0.224785498032482 0.229324298757769 0.227271526861482 0.232808145335463 0.237699332273556 0.232987476454260 0.229735602021053 0.226138976139883 0.224889776781044 0.223912152504181 0.230429823380883 0.222660322581062 0.2393087932671 0.223234085651172 0.227989127347966 5 5 - 17889332 17889888 17889680.364 17889151 17890925 - gene protein_coding_gene TRUE TRUE AT5G44360.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20860.1); similar to FAD-linked oxidoreductase 2 [Glycine max] (GB:ABC41951.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR006093) -0.158343037283767 -1.66050830480763 0.126120506875890 1 1.28090707288598 3.63510648150042 -0.158343037283767 0.0860336298976767 AT5G50010_at 1.48482426318837 0.966085346315353 1.46417513975823 1.28504703232269 0.733207426661483 1.19682834997626 0.979972152009697 1.26686051978746 0.951259035702615 1.24904971506415 1.61507699758159 1.53689952442201 1.40765206561819 1.64659553899383 1.84758623718316 1.89557095300486 2.28676630034619 1.77839680757396 1.37464619883886 0.191438696605483 0.205334210339517 0.198409370008256 0.202413910081063 0.196698600184965 0.200476397952316 0.198590137317921 0.194388329576549 0.207067913454070 0.199222460295024 0.197320748380102 0.195088229130136 0.199321855096684 0.203046365065866 0.192348398959660 0.191438696605483 0.201932145934095 0.191438696605483 0.191438696605483 5 5 + 20367128 20367630 20367369.273 20365841 20368056 + gene protein_coding_gene TRUE TRUE AT5G50010.1 transcription factor/ transcription regulator similar to SAC51 (SUPPRESSOR OF ACAULIS 51), transcription factor/ transcription regulator [Arabidopsis thaliana] (TAIR:AT5G64340.1); similar to Os01g0626900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043630.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 0.189757870375587 1.65981677649417 0.126261549499617 1 1.27999692597686 2.64385988023195 0.189757870375587 0.133871651712863 AT5G16510_at 6.5920084975979 6.67326027131263 7.13963499182331 7.54807152195432 7.36915998515085 7.01955366128409 5.91140903333085 6.26798382096465 5.3356447290979 5.33033483597379 6.66290286864235 6.94714082969366 6.72063620363182 6.65151619835568 6.89651630528912 6.65091511197153 6.41915228694475 6.62941075279055 4.82773396854012 0.170047040417971 0.164188192862624 0.166705869924137 0.172346821259547 0.162491326135168 0.182979958826572 0.170614619597363 0.166706478125421 0.177734404291348 0.169743853190669 0.173120629550128 0.162491326135168 0.168492028066169 0.166977181502552 0.162491326135168 0.162491326135168 0.169928752542112 0.173895132488897 0.173279551274433 5 5 + 5393746 5394272 5393976.455 5392608 5394571 + gene protein_coding_gene TRUE TRUE AT5G16510.1|AT5G16510.2 reversibly glycosylated polypeptide, putative similar to RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) [Arabidopsis thaliana] (TAIR:AT3G02230.1); similar to Alpha-1,4-glucan-protein synthase (UDP-forming) [Medicago truncatula] (GB:ABD28560.1); contains InterPro domain Alpha-1,4-glucan-protein synthase (UDP-forming); (InterPro:IPR004901) 0.174666142302658 1.65922857527110 0.126381628449538 1 1.27922293619072 12.7460577216951 0.174666142302658 0.112524450161596 AT5G33380_at 1.58896803191956 1.62967563880200 1.37139684237578 1.59407664094251 1.34816621868451 1.51266294500103 1.22707440081143 1.73718058980218 1.37996961016872 1.52667992576763 1.61006935522785 1.53985254126484 1.61029634328986 1.29140284842476 1.50503235494397 1.29533948039125 1.51253845455279 1.59091518016344 1.67785972610873 0.211421712314929 0.222822142277490 0.219238342481284 0.217316625954524 0.219837151711737 0.222584752133574 0.217329773478820 0.219404694643491 0.217395801811485 0.215008050671899 0.212500346590592 0.214385019218649 0.214792187095322 0.212923034744348 0.218655684040664 0.211421712314929 0.214616488988105 0.212389117681294 0.215022525320231 5 5|0 +|/ 12625057 12625561 12625346.111 12625040 12625592 + gene protein_coding_gene TRUE TRUE AT5G33380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28430.1) -0.166889235835464 -1.65835645574401 0.126559855633027 1 1.27807562832203 3.01245045044106 -0.166889235835464 0.100686127112489 AT5G67050_at 2.46398478752681 2.38635391501661 2.59485073968592 2.29013472698197 2.05171336714498 2.34083511537953 2.20902623459475 2.04271656851130 2.23101233770419 2.25897971448504 2.42525829236191 2.47134509586155 2.24128156919981 2.1485526839818 2.34644860468842 2.07867263994749 2.61544022308546 2.43653165156994 2.23301605478546 0.187030443894810 0.188244590792944 0.190606514688751 0.187453772747500 0.187131317126958 0.191812582550925 0.184358812908427 0.185305958387198 0.182765766037643 0.187316552159534 0.193347939317603 0.187731916485330 0.186701045918434 0.185932061195774 0.182200471627636 0.182718760936949 0.193916004033445 0.193072591950419 0.182508901569248 5 5 - 26776787 26777315 26777138.273 26776686 26778423 - gene protein_coding_gene TRUE TRUE AT5G67050.1 lipase class 3 family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45201.1); similar to Lipase, class 3 [Medicago truncatula] (GB:ABE93566.1); contains InterPro domain Lipase, class 3; (InterPro:IPR002921) -0.154375609400217 -1.65756055775256 0.126722701653472 1 1.27702888327425 4.59067395556121 -0.154375609400217 0.0793279051175241 AT5G66560_at 4.25662208315915 4.82672989303222 4.85885537432360 4.5068450167995 5.54265700164855 5.27435573233456 5.05372544230208 4.89542385889709 4.51765754376817 4.45150787026165 6.13452156456459 6.51285371627855 5.9315920340076 6.01896362107277 6.3918116804594 5.87761029226347 4.39515696840591 5.56072586026975 4.94030372214169 0.202732419156705 0.205391053284959 0.207697410145371 0.204512128156857 0.197791201325868 0.214850594516250 0.203793106818815 0.198450109247604 0.222420439506184 0.202163487696613 0.202065407879613 0.201988278117905 0.201681706127771 0.201380866081106 0.205818004562591 0.198161786035676 0.222588661092012 0.211273578099011 0.204988552407062 5 0|5 /|+ 26583439 26583830 26583576.333 26581414 26584079 + gene protein_coding_gene TRUE TRUE AT5G66560.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT3G50840.1); similar to Os03g0767600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051388.1); similar to putative NPH1 photoreceptor-interacting protein [Oryza sativa (japonica cultivar-group)] (GB:AAP50946.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) -0.185068874647511 -1.65687583273168 0.126862950401637 1 1.2761285720508 10.1465988899233 -0.185068874647511 0.12787078891654 AT5G48740_at 1.03057845186774 1.33686522523518 1.07021106870697 1.42296875884928 0.949453406845012 0.848173092833355 0.614972471208544 1.02779454367624 1.35611969392707 1.20753875373609 1.4778307053684 1.89160853398566 1.26971033268003 2.08735128416660 2.12328503312220 1.88281434527709 2.06333164112528 2.13872024704279 1.67688307239038 0.212592029018028 0.219229005444610 0.212592029018028 0.213456841831612 0.21890800581918 0.216418624765408 0.212592029018028 0.215470161907789 0.225970673665414 0.221310936349981 0.214982322130657 0.223616128758432 0.220661752830277 0.212592029018028 0.219132107644121 0.214210424581907 0.221829122229563 0.221720324691202 0.212592029018028 5 5|0 -|/ 19782565 19783108 19782802.3 19782421 19786595 - gene protein_coding_gene TRUE TRUE AT5G48740.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G67720.1); similar to Protein kinase; Hydroxymethylglutaryl-coenzyme A reductase [Medicago truncatula] (GB:ABE88840.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.172276051646337 1.65684533455929 0.126869200404799 1 1.27608847628266 2.67779980508472 0.172276051646337 0.109302802620387 AT5G06070_at 1.47963535038386 1.46123029912466 1.84231598424970 1.69743731037355 1.48514970947549 1.33309641619435 1.12607244875462 1.24516012510376 1.43107390983331 1.59380613028376 1.47685293568409 1.43611645695548 1.54597441156090 1.88665924183637 1.79653075100406 1.53206114968285 1.7335459001671 1.21103583801565 1.05531579186198 0.208131207305028 0.208591485908979 0.207064176680162 0.218123028300639 0.212653346843527 0.216099628436399 0.212910234830462 0.207374739743094 0.208833118067780 0.212302233556929 0.206519094384449 0.211007805011701 0.211638605187928 0.211590565922021 0.206581124115845 0.210041269514658 0.223414595416642 0.211190723492779 0.215620868408146 5 5 - 1828429 1828984 1828758.727 1828151 1829187 - gene protein_coding_gene TRUE TRUE AT5G06070.1 RBE (RABBIT EARS); nucleic acid binding / transcription factor/ zinc ion binding Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus. Identical to Probable transcriptional regulator RABBIT EARS (RBE) [Arabidopsis Thaliana] (GB:Q9LHS9); similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G37740.1); similar to SUPERMAN-like zinc finger protein [Gossypium hirsutum] (GB:AAZ79470.2); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.138145944589728 1.65604162217111 0.127034004466953 1 1.27503198724901 2.92746838692733 0.138145944589728 0.0419030543209255 AT5G58830_at 1.17533582446097 1.32571931910818 1.24850734272104 1.52417846126043 1.42007650008951 1.32282898102092 1.13668610599954 1.36766608946983 1.36507119227748 1.49977422719734 1.69616856926648 1.95374723152439 1.93201875312269 1.86269709409929 1.68680297033174 2.11191327409004 1.77831472580896 1.64937381508982 1.50807653918764 0.185864077752088 0.184625658546733 0.183532421852604 0.186711964215618 0.187896241947271 0.183499470137806 0.184383586500850 0.182549698314168 0.193787415125565 0.185388470497806 0.187498521878606 0.182579954000514 0.185057772862542 0.184119303263766 0.181639065129614 0.187108603018637 0.193198186969198 0.181718713904864 0.185757704586352 5 0|5 /|+ 23775304 23775715 23775550.4 23773199 23775910 + gene protein_coding_gene TRUE TRUE AT5G58830.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59090.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58820.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.149005472363942 1.65332072721896 0.127593350715342 1 1.27145744420501 2.96088493154338 0.149005472363942 0.0695280561731264 AT5G12430_at 6.53346347442154 6.67653452770434 7.46002755200916 7.76480079767984 8.5292150051173 7.72868557067151 7.22949992131164 7.00736560037617 6.69247967138635 6.18281876100886 7.82887834835585 8.07263134187661 7.77744653146507 7.97060754396902 7.87113731509241 7.77366914908254 7.47272480716948 8.27883201205656 6.50239380570848 0.220105750008915 0.203350188018153 0.204783320794941 0.202739304040119 0.209307856385986 0.205868197022264 0.20200891357365 0.205581696442860 0.206412675171653 0.209759364533184 0.2062225061746 0.202545811263311 0.212640173221982 0.211781107794694 0.209249146641152 0.20200891357365 0.215053485099494 0.20200891357365 0.208455791031588 5 5|0 -|/ 4028507 4029626 4029130 4027980 4034087 - gene protein_coding_gene TRUE TRUE AT5G12430.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G41520.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81123.1); similar to Os01g0273500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042715.1); similar to Os05g0374600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055374.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.205012968098177 1.65244954484422 0.127772906639019 1 1.27031362651422 14.5361848697454 0.205012968098177 0.155127564522097 AT5G60690_at 5.95047194208518 5.38739172834858 6.71087754877041 6.49846641557488 6.27024123679344 6.24659493411471 5.55907565513226 5.81099966545478 4.84280654363985 5.67583844582508 6.57232031916458 6.88443364799475 6.0538237718951 6.51956063690804 6.37506531858285 6.59864887064049 6.30376547138134 6.57776880778331 6.05788995969281 0.210429367249536 0.192244152501018 0.20452993016183 0.202972706082122 0.194282759514586 0.197307045354932 0.195844269478102 0.192592540101165 0.205730096581641 0.192030891787629 0.201593683730091 0.199613369493308 0.194187649307723 0.191508566715180 0.19836643938293 0.195569760984541 0.19437283876167 0.193006760826543 0.194513022619640 5 5|0 +|/ 24418387 24418884 24418568 24414249 24419421 + gene protein_coding_gene TRUE TRUE AT5G60690.1 REV (REVOLUTA); DNA binding / lipid binding / transcription factor REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA. similar to PHV (PHAVOLUTA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G30490.1); similar to PHB (PHABULOSA), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G34710.1); similar to ATHB-15 (INCURVATA 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G52150.2); similar to class III HD-Zip protein 1 [Populus trichocarpa] (GB:AAX19050.1); similar to TPA: TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus] (GB:DAA05766.1); similar to HD-Zip protein [Zinnia elegans] (GB:CAC84906.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.174233431212148 -1.65224229652649 0.127815654887951 1 1.27004156930418 12.0598573934158 -0.174233431212148 0.112977352069520 AT5G35680_at 9.73770714940473 10.1009981851121 10.9644518597806 10.9256121718894 10.627587247313 10.5175270645303 10.3522759366923 10.3334237284952 9.39450193901177 9.5396607977657 10.3706079162708 10.3484705212130 10.4098725556619 10.4066151708749 10.2576148462001 10.5192730875977 10.4735063204919 10.3806025988607 9.35521965513958 0.124755791728517 0.119012349832682 0.114999910712230 0.118006638200668 0.111821801856295 0.115830642169587 0.111084507487129 0.111714805639764 0.128015058921143 0.118332401110924 0.116379245183182 0.114793310449776 0.11782622121291 0.121746613182969 0.113967851659013 0.120234271602823 0.123959567975103 0.116785446100585 0.123111883530505 5 5 - 13875463 13875692 13875598.727 13875151 13876243 - gene protein_coding_gene TRUE TRUE AT5G35680.1|AT5G35680.2 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative similar to eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative [Arabidopsis thaliana] (TAIR:AT2G04520.1); similar to putative translation initiation factor eIF-1A-like [Solanum tuberosum] (GB:ABB55392.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain S1, IF1 type; (InterPro:IPR006196); contains InterPro domain Eukaryotic initiation factor 1A (eIF-1A); (InterPro:IPR001253) 0.147250259896003 1.65174013483541 0.127919286519962 1 1.26938245440758 20.3577551717949 0.147250259896003 0.0661144800438048 AT5G47390_at 9.17672380497434 9.16121126768297 9.68020003870111 9.78285883879568 10.0935110306980 10.1335044528415 9.32878028742762 9.4010101219658 9.71112538373038 9.64985893223993 10.1014638361822 10.1239960093860 10.1413062661209 10.0386631646527 10.0346658670619 10.2007016731064 10.2928645222384 10.1983848193362 9.68975505111933 0.0843174494350652 0.0835492666720074 0.0861720574812486 0.0819401235027136 0.0813858830692631 0.08412999464034 0.0810171356218278 0.0894784733410191 0.0912254806900149 0.0831253592996403 0.0831285415452835 0.0798126693745948 0.0828743633142275 0.0840356639622376 0.0804076251464715 0.0798126693745948 0.084665518406602 0.0829606206638587 0.0829869686799241 5 5 + 19245232 19245717 19245466.455 19244017 19246085 + gene protein_coding_gene TRUE TRUE AT5G47390.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G16350.1); similar to myb family transcription factor [Brassica oleracea] (GB:ABD65013.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) -0.133052405345939 -1.65104671172892 0.128062511973358 1 1.26847248098357 19.5072677597811 -0.133052405345939 0.0229557457470063 AT5G39950_at 10.5898962500697 10.7347140639455 11.5659906968127 11.4131951244093 11.3800554797512 11.1401351430197 10.2910247233554 10.1833139261397 10.2293801855372 10.0811853209072 10.6664247727027 10.6702523151380 10.5757716756168 10.5983893387985 10.3976882262588 10.689424558328 10.5378394325557 10.9941534218671 9.8622361926596 0.088407060276735 0.0867145623660367 0.0867145623660367 0.08972775158076 0.0883395068756072 0.0888171062588893 0.0867145623660367 0.0901049871225427 0.0927258315327907 0.0890633713434925 0.0905391018016507 0.0898280025495611 0.0899069057821572 0.0896364789175458 0.093022353637752 0.0878792873438248 0.0907064323351985 0.0875515035904699 0.0934055231703915 5 5|0 -|/ 16008192 16009082 16008798.222 16007915 16009159 - gene protein_coding_gene TRUE TRUE AT5G39950.1 ATTRX2 (Arabidopsis thioredoxin h2, thioredoxin H-type 1); thiol-disulfide exchange intermediate encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. Identical to Thioredoxin H-type 2 (TRX-H-2) (TRX2) [Arabidopsis Thaliana] (GB:Q38879;GB:Q39240); similar to ATH8 (thioredoxin H-type 8), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G69880.1); similar to thioredoxin h (GB:AAC49353.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Thioredoxin; (InterPro:IPR005746) 0.143737594276066 1.65097949301914 0.128076403481663 1 1.26838428169284 21.261712442951 0.143737594276066 0.058297097481808 AT5G55220_at 8.85210373699515 8.84777705932052 9.2679387375881 9.06649046185852 9.7844282189141 9.5534371350655 9.4639168521975 9.125496668392 8.63040457994293 9.24877792790224 9.77718428222043 10.1910063306290 9.61250619051196 9.3214799834989 10.6239117959891 9.86009398231988 9.69876146176473 9.32184958309736 9.0665659389959 0.0931696195949533 0.0915191064960005 0.0899590709975366 0.0946826058589803 0.0910371864393482 0.092474881267531 0.0901593697085433 0.0910347451757455 0.095441201143863 0.0957775195745722 0.0899806043847447 0.0897919408673236 0.0929304312828122 0.095058337229651 0.0890510097232701 0.0890510097232701 0.0890694474558523 0.093967261289485 0.0940057083033447 5 5 + 22416917 22417870 22417260.7 22414842 22418068 + gene protein_coding_gene TRUE TRUE AT5G55220.1 trigger factor type chaperone family protein similar to Os06g0308000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057472.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL52285.1); contains InterPro domain Bacterial trigger factor, C-terminal; (InterPro:IPR008880); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179); contains InterPro domain Bacterial trigger factor, N-terminal; (InterPro:IPR008881) -0.153505802189462 -1.64999191631969 0.128280652121640 1 1.26708868818745 18.6365812838919 -0.153505802189462 0.0790170758826992 AT5G57960_at 7.99838270522637 7.94048397669398 9.1368762274665 9.11466412114085 9.31368488391688 8.71177932518759 9.3534626604706 9.25325762553775 7.95703260713247 8.5349414915 9.10499537501578 9.17740546082338 9.08477616223962 9.11213125360988 8.92548205072195 9.49846808070073 9.27768374133803 8.91568986346237 8.4155477453022 0.161411619993223 0.156028024757486 0.150622727604878 0.152696648129042 0.150622727604878 0.158225506877833 0.150907311016513 0.151088315952783 0.188725155548938 0.162464045261712 0.158329215550711 0.150622727604878 0.15695621044741 0.155979142928172 0.155807943188133 0.152561474249042 0.160911921015399 0.161158353035844 0.155517594143852 5 5|0 -|/ 23480392 23481661 23480848 23479996 23483729 - gene protein_coding_gene TRUE TRUE AT5G57960.1 GTP-binding family protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G49730.1); similar to Small GTP-binding protein domain [Roseiflexus sp. RS-1] (GB:ZP_01357074.1); similar to Os11g0592700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068195.1); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain GTP1/OBG; (InterPro:IPR006073) -0.169494334554279 -1.64986559602807 0.128306798339973 1 1.26692300070791 17.5726170806053 -0.169494334554279 0.106140082819956 AT5G61410_at 12.6744167842077 12.7313068819157 13.1067099771477 13.0014013399575 13.2092659858584 13.0100541503745 13.3188878656094 13.2153704169023 13.1641728321627 13.1513728978871 13.6500994765560 13.6838768418342 13.5197408252293 13.4914643141673 13.5366957777080 13.4670223716229 13.5268094265812 13.7803502889047 13.0327288686353 0.0774100703342781 0.0769595601262765 0.0797521335906277 0.078225999495939 0.0783788522136906 0.0769595601262765 0.0806874577105872 0.0774794007259815 0.0856886525018406 0.0783948361966022 0.0800702841132666 0.0769595601262765 0.0778559759785727 0.0836582620523225 0.0791589405293631 0.0769595601262765 0.0877670033999895 0.0793165478003444 0.0779973996472138 5 5 - 24701324 24702409 24702007.182 24700832 24703331 - gene protein_coding_gene TRUE TRUE AT5G61410.1|AT5G61410.2 RPE (EMBRYO DEFECTIVE 2728); ribulose-phosphate 3-epimerase Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA similar to ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] (TAIR:AT3G01850.2); similar to Ribulose-phosphate 3-epimerase, chloroplast precursor (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (GB:Q43157); contains InterPro domain Ribulose-phosphate 3-epimerase; (InterPro:IPR000056); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060) -0.138307483432336 -1.64981569793715 0.128317127729469 1 1.26685755402727 26.3824761493569 -0.138307483432336 0.0440279123551386 AT5G54980_at 5.54988416728469 6.15242340570608 6.61259118749162 7.02734942823819 7.81705232625445 7.45757730172752 6.05712695424318 6.41211222744706 5.94981662045203 5.6258622551983 7.51703106072787 7.13699177131536 7.90526162465506 7.44870799807556 6.43681003264203 7.69635004842292 6.9349363189548 6.72023147076174 6.16091652569514 0.258691973463108 0.251586076917184 0.255195585535607 0.246265454455428 0.246265454455428 0.27714478522148 0.258561678792032 0.246958891417531 0.260053824434621 0.251475805923992 0.246265454455428 0.246265454455428 0.248203717490947 0.268023383732654 0.254482562283217 0.249918255628907 0.259773578447883 0.262653881841858 0.254441765929109 5 5 + 22333087 22333747 22333414.636 22332925 22333827 + gene protein_coding_gene TRUE TRUE AT5G54980.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT1G17200.1); similar to Os02g0219900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046315.1); similar to hypothetical protein [Gossypium hirsutum] (GB:CAC84114.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 0.203490172021633 1.64821592114771 0.128648689628226 1 1.26475985854676 13.2041338787039 0.203490172021633 0.153844989710636 AT5G35890_at 0.0633930517817905 0.0138263186524400 0.632889962036574 0.382424398765232 -0.144968587977710 0.281768052726386 -0.204643280197191 -0.183061343306942 -0.173893965606107 0.510079700033065 0.383697462000366 0.258363862011911 0.710362891062075 0.0759161912127765 0.189880221701318 -0.234533546252524 0.201129290462601 0.242028948453754 0.210227692035355 0.234738985101989 0.241530406037674 0.246770853555317 0.240281604716929 0.234738985101989 0.238202096461835 0.235072253256536 0.234738985101989 0.240705488678929 0.242434927089536 0.242703911749047 0.241686044358198 0.23739194391416 0.246715731952634 0.253084157139642 0.234738985101989 0.234738985101989 0.234738985101989 0.250041509316259 5 5 - 14043106 14043658 14043328.444 14043093 14043956 - gene protein_coding_gene TRUE TRUE AT5G35890.1 contains domain BETA-GALACTOSIDASE RELATED (PTHR23421); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK22 (PTHR23421:SF10) 0.157167386525992 1.64755959545282 0.128784936916050 1 1.26389958359686 0.310450308511225 0.157167386525992 0.0861387824494416 AT5G10300_at 4.11088619425772 4.7039423743989 4.95999551426107 4.20337201724043 5.15762122834306 4.41155968776056 2.93019755986793 3.09747267205259 2.12520289003683 3.01069097015435 2.81007690983527 2.77135525800813 2.85740924646192 3.17948639508556 3.06667413359774 3.46628900237816 3.35225195998308 3.10181662846168 1.99909612803891 0.26205082240091 0.269229375263509 0.267384915698303 0.265253393246763 0.283487767010829 0.261919922609456 0.253639838639711 0.253639838639711 0.264002298863363 0.257088156470453 0.256991216987071 0.257796716532868 0.253969209643865 0.259757780728481 0.253639838639711 0.253639838639711 0.262793286951687 0.257196066008793 0.264028362294228 5 5|0 +|/ 3239869 3240678 3240286 3239618 3240871 + gene protein_coding_gene TRUE TRUE AT5G10300.1 hydrolase, alpha/beta fold family protein similar to esterase, putative [Arabidopsis thaliana] (TAIR:AT2G23620.1); similar to 80A08_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67612.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073) 0.251594277006338 1.64554045067977 0.129204898602827 1 1.26125419749543 6.92388087492435 0.251594277006338 0.212567456494277 AT5G59500_at 7.8517877808077 8.02826551540834 8.19290911161207 8.15241816574554 8.2785300078297 8.15628964381813 7.55566029663755 8.1755797715504 7.65894748423857 7.18445291706976 8.62865844066471 8.79890731649175 8.34650747597954 8.53863195938995 8.95266124860625 8.45090323791004 8.29877711787802 8.39670959135665 7.23152529781194 0.189204335257386 0.186724446772304 0.197665224334711 0.197491435548332 0.19414723959241 0.192765207853773 0.197556956534799 0.192958980857964 0.212771396025648 0.198983134642436 0.197124466898504 0.189638263976443 0.191036455489471 0.196620230959859 0.193771791930428 0.185970880300827 0.195143991004396 0.194285850704832 0.204060576290579 5 5 + 24003865 24004293 24004037.727 24003155 24004607 + gene protein_coding_gene TRUE TRUE AT5G59500.1 protein-S-isoprenylcysteine O-methyltransferase similar to hypothetical protein ST1187 [Sulfolobus tokodaii str. 7] (GB:NP_377119.1); contains InterPro domain Isoprenylcysteine carboxyl methyltransferase; (InterPro:IPR007269) -0.173955489383840 -1.64473755717212 0.129372230582515 1 1.26020278728054 16.0038190941302 -0.173955489383840 0.113746655731330 AT5G48550_at 2.36812828948735 2.64936928696906 3.30846452628942 3.2115031451869 2.78760570950891 3.00256824329859 3.12467112290371 3.26382535654643 2.5441564322837 2.65412719424003 2.71809285121773 2.33735573656748 2.77749101490664 3.21592546593019 2.46516958307519 2.87655369084953 3.60982465312618 3.12472529359314 2.70800427426455 0.201213397842509 0.201044492044695 0.197254287556387 0.213501229416292 0.201831673906596 0.204163473176343 0.199240870193586 0.201108257115763 0.20887373262082 0.199127708079803 0.201285902503129 0.198572771537186 0.199990304322348 0.198714928006027 0.201488541325277 0.197254287556387 0.202690093707772 0.199684051005613 0.203479048832414 5 5 + 19697273 19697656 19697452.364 19696143 19697786 + gene protein_coding_gene TRUE TRUE AT5G48550.1 F-box family protein-related similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G47730.1); similar to Os09g0448100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063316.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.147455517309667 -1.64456614293012 0.129407980185246 1 1.25997835286268 5.7275527532343 -0.147455517309667 0.0679271629916392 AT5G44350_at 1.81486007147723 2.1400568485277 2.50072440000173 2.58692210901312 1.67677605123170 2.11694942683006 1.6753916322746 2.32537894968582 1.71256016262997 2.06752914435464 1.61562764924409 1.67320571538014 1.94644545757399 1.6801147441238 1.36515471857994 1.70116603090477 1.92897651880460 2.18180212994083 2.37107101427841 0.240458483427214 0.25126917700813 0.239628506852434 0.270349872933578 0.241014952407825 0.237225167921901 0.237931955996224 0.261307841776447 0.244131330526515 0.234747822965788 0.240007532686218 0.237185909555901 0.23854265730111 0.242580554614229 0.240000554352541 0.234612079748949 0.251086612919347 0.234612079748949 0.234612079748949 5 5 + 17882274 17882797 17882494.818 17881747 17882934 + gene protein_coding_gene TRUE TRUE AT5G44350.1 ethylene-responsive nuclear protein -related similar to ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) [Arabidopsis thaliana] (TAIR:AT4G20880.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE90052.1) -0.198272611877018 -1.64355474516967 0.129619092956376 1 1.25865438502576 4.01060663329192 -0.198272611877018 0.147799128848843 AT5G08270_at 3.08498196837325 3.09772559714233 3.6682499843057 3.76312728742073 4.18603138371749 3.72215620600297 4.06088749390577 3.8926652983181 3.28042779201297 2.62048708829092 3.67597108736146 4.10286921270823 4.1176792833488 3.71008419397777 3.91387136804858 3.76952077034188 3.7143055423145 3.37863490376866 3.59333037636236 0.22444466214251 0.219231817791685 0.219119736171145 0.215809994170797 0.215922104812938 0.231237156563958 0.215809994170797 0.215809994170797 0.228758519216573 0.221170728297416 0.221983972315104 0.225119298466849 0.215914614361074 0.21602661310256 0.223374976606945 0.215847811241425 0.227666958932445 0.222878577387824 0.22094960472661 5 5 + 2662884 2663369 2663150.636 2661659 2663628 + gene protein_coding_gene TRUE TRUE AT5G08270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23200.1); similar to Os02g0634600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047513.1); similar to hypothetical protein MA4_54B05.28 [Musa acuminata] (GB:ABF70082.1) -0.157256032075768 -1.64350403217416 0.129629686525159 1 1.25858801126229 7.16578588445953 -0.157256032075768 0.0869835111971194 AT5G09970_at 2.06862433683167 1.81106269132608 2.09869566425916 2.50553882979352 1.8398088739485 2.08301069175577 2.23745893337721 1.75741029971798 2.15208878903818 2.01286159553912 2.05834275427765 1.71220996282184 1.73189967100005 1.62249178720440 2.04374206085812 1.97948957091474 2.24443640964289 1.94125783481692 2.12231117464242 0.185061149912359 0.186993878692791 0.183750841141126 0.195424688846042 0.189635181292157 0.192675181867702 0.192449313524037 0.188232344198562 0.191549057849371 0.19491624536848 0.189220992785958 0.187214758645129 0.194654130954889 0.183750841141126 0.188525580452173 0.183750841141126 0.190813709987207 0.186893629872605 0.187297335563162 5 5 + 3113421 3113891 3113661.273 3111946 3114240 + gene protein_coding_gene TRUE TRUE AT5G09970.1 CYP78A7 (cytochrome P450, family 78, subfamily A, polypeptide 7); oxygen binding member of CYP78A similar to CYP78A9 (CYTOCHROME P450 78A9), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G61880.1); similar to Os10g0403000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064552.1); similar to cytochrome P450 78A11 [Oryza sativa (japonica cultivar-group)] (GB:BAC76730.1); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.181345753576669 -1.64191765007379 0.129961458920586 1 1.25651231309906 4.05644509488389 -0.181345753576669 0.124965740519368 AT5G61620_at 1.57223303855570 1.74482791373716 2.13663147874663 2.52367278347061 1.31076825002169 1.93108567395229 1.55970051662637 1.84139399148766 2.18101455392808 2.23078240484734 1.56621868144511 1.56356891967008 1.87851847770944 1.86133094629462 1.35577722747866 1.97514920937746 2.15040223542727 1.95105068355034 2.06506055665175 0.195385870935467 0.192425301028556 0.193412910392065 0.189690795681658 0.190169180297861 0.19333116546114 0.189606849015028 0.189161867250030 0.190178667365191 0.192293507106052 0.191610416151397 0.199796927712064 0.195336377803859 0.195234659594781 0.192326257055186 0.189161867250030 0.194499955684196 0.189161867250030 0.193129916267583 5 5 + 24790103 24790685 24790456.182 24789609 24790733 + gene protein_coding_gene TRUE TRUE AT5G61620.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G47390.1); similar to MYBR2 [Malus x domestica] (GB:AAZ20443.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) -0.191344058074204 -1.64178363709433 0.129989520644459 1 1.25633701539693 3.80089148220552 -0.191344058074204 0.138847105201748 AT5G59090_at 1.16718306499194 1.17749620244307 0.897509674898208 1.12747617105633 1.06611826470262 1.07200188353931 0.909794291019544 0.989668814798757 1.42587949208572 1.35562258533660 1.10715871600640 1.31886882771362 1.51750917881095 0.881573240588796 1.14457757829169 1.27679783091556 1.56832975216854 1.64437055826949 1.42853872153864 0.17853946611276 0.17853946611276 0.183862597985914 0.185785292066319 0.178572826012404 0.179917893885889 0.185658422187128 0.183362147351297 0.186791438185304 0.182014972584367 0.180715042874111 0.181359143218033 0.181513078163436 0.187985081704126 0.182364673450814 0.182880732855052 0.187333320473236 0.193259811175683 0.182672396119656 5 5 - 23869437 23869870 23869575.727 23869131 23872501 - gene protein_coding_gene TRUE TRUE AT5G59090.1|AT5G59090.2|AT5G59090.3 subtilase family protein|subtilase similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58820.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to subtilisin-like protease C1 [Glycine max] (GB:AAN12272.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020)|similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58820.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259) -0.136946341239878 -1.64062743475141 0.130231848065728 1 1.25482495962126 2.40627861759753 -0.136946341239878 0.0421790370155696 AT5G04770_at 4.43755921987359 5.67851353311183 5.64561950238798 6.27467028522143 6.05895554989744 6.62654144979193 4.11325605654864 4.72132023123627 3.4812690906435 3.60685646007486 3.87495113095143 4.55774469817057 4.75282557139977 4.79776630265464 3.8408386608354 4.91627544889634 5.56303835553564 4.32362745152081 3.66604992669877 0.240905740127428 0.241842683671225 0.236521862805354 0.240403432518610 0.242470407120814 0.245064383825315 0.241497546241168 0.241671921136090 0.234911646573134 0.241015286080971 0.240396481394432 0.239659131800306 0.244866861300583 0.254083579919691 0.240730778640548 0.234911646573134 0.237235747023421 0.234911646573134 0.234911646573134 5 5|0 +|/ 1380513 1382219 1381904.5 1379069 1382420 + gene protein_coding_gene TRUE TRUE AT5G04770.1 ATCAT6/CAT6 (CATIONIC AMINO ACID TRANSPORTER 6); amino acid transporter/ cationic amino acid transporter Transporter for essential amino acids, with preference for large, neutral and cationic amino acids. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. similar to CAT7 (CATIONIC AMINO ACID TRANSPORTER 7), cationic amino acid transporter [Arabidopsis thaliana] (TAIR:AT3G10600.1); similar to Amino acid permease family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96501.1); similar to Os11g0155500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065789.1); similar to amino acid transporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAX92723.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) 0.311437408659472 1.64043672560138 0.130271857179823 1 1.25457561165127 9.52610878432595 0.311437408659472 0.280517728783232 AT5G19500_at 5.9390742017943 5.83091868690236 6.97822384685986 6.953196282029 7.19021429222721 6.77650880439973 6.78516055256699 6.28079234114819 6.51472378499471 5.85352797584424 7.28287776308739 7.31997442716734 6.73480752704504 7.18975206120821 6.87927408765389 7.29316935641923 6.88021259423324 6.55165422857337 5.74570997689310 0.213001677071127 0.211208488828775 0.211312227494701 0.206860888944234 0.215330561739901 0.222048177731116 0.207468011494403 0.217451866712028 0.215428812429204 0.215016810264412 0.212416473410607 0.212075957981944 0.208360926177439 0.210108575845866 0.218726504451281 0.212984798418783 0.219008137288532 0.214852861998363 0.229910082187729 5 5|0 +|/ 6580893 6581611 6581267.111 6578954 6581947 + gene protein_coding_gene TRUE TRUE AT5G19500.1 tryptophan/tyrosine permease family protein similar to tryptophan/tyrosine permease family protein [Arabidopsis thaliana] (TAIR:AT2G33260.1); similar to Tryptophan/tyrosine permease family protein [Solanum demissum] (GB:AAT40501.1); similar to Os07g0662800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060546.1); contains InterPro domain Aromatic amino acid permease; (InterPro:IPR002091); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422) -0.173999656938815 -1.64031731777588 0.130296913459474 1 1.25441949683047 13.1189873767830 -0.173999656938815 0.114512445354158 AT5G13010_at 8.04405290369277 7.91168082912419 9.11588999743713 8.97681609106757 9.18039933775377 9.01900194384375 7.5091792056517 7.69332755250957 8.07426341638682 8.09867616916577 8.95179728983771 8.98231118218269 8.99013035573817 8.66383478282495 8.29976662804516 9.04794938667836 8.9084065636685 8.7806666602594 8.2362853822599 0.162792876107107 0.150960306290830 0.157552247352906 0.157165452414152 0.156529549771078 0.150908239400626 0.160290870591535 0.168584208263408 0.177729972781795 0.158034553321999 0.151589129235399 0.146347067494794 0.155036611118215 0.157416210219650 0.164621380312131 0.146282107046443 0.155707170380477 0.153054584399740 0.149796048778625 5 5 + 4128122 4128628 4128322.364 4122423 4128864 + gene protein_coding_gene TRUE TRUE AT5G13010.1 EMB3011 (EMBRYO DEFECTIVE 3011); RNA helicase similar to MEE29 (maternal effect embryo arrest 29), ATP-dependent RNA helicase [Arabidopsis thaliana] (TAIR:AT2G35340.1); similar to ATP-dependent RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT3G26560.1); similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733), ATP-dependent RNA helicase [Arabidopsis thaliana] (TAIR:AT1G32490.1); similar to DEAH-box RNA helicase [Chlamydomonas reinhardtii] (GB:AAG33228.2); similar to mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] (GB:CAL55058.1); similar to hypothetical protein LOC393850 [Danio rerio] (GB:NP_957170.1); contains InterPro domain Helicase-associated region; (InterPro:IPR007502); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain Protein of unknown function DUF1605; (InterPro:IPR011709); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.140462342725122 1.63381390629567 0.131668058765465 1 1.24592650382891 16.9135515720143 0.140462342725122 0.0538485524472232 AT5G16150_at 10.1899947456346 10.3148326766995 10.5496782041344 10.5610062658367 10.8464109307887 10.6987424488231 9.77248120036758 9.77721546843413 10.4639628567274 10.2480243920605 10.8337209853717 10.8255560565378 10.5723143457838 10.7316298880461 10.6625126640148 10.6047553159404 10.1043365882674 10.8383270488839 10.2039558672560 0.100102558069759 0.0969796329545773 0.0989957070258815 0.0998149897219486 0.0977341530284724 0.0997175065572584 0.101329625842041 0.106498044130246 0.103020159273213 0.09999329941101 0.0969796329545773 0.0969796329545773 0.0969796329545773 0.100093501460366 0.100058845930887 0.0969796329545773 0.109348632651359 0.103112066448884 0.104084870386197 5 5|0 +|/ 5274739 5275655 5275148.778 5272560 5275818 + gene protein_coding_gene TRUE TRUE AT5G16150.1|AT5G16150.2|AT5G16150.3 GLT1/PGLCT (GLUCOSE TRANSPORTER 1); carbohydrate transporter/ sugar porter Encodes a putative plastidic glucose transporter. Identical to Plastidic glucose transporter 4 (AtpGlcT) [Arabidopsis Thaliana] (GB:Q56ZZ7;GB:Q93Z41;GB:Q9LF13;GB:Q9LLD8); similar to hexose transporter, putative [Arabidopsis thaliana] (TAIR:AT1G05030.1); similar to plastid hexose transporter [Vitis vinifera] (GB:AAU07980.1); similar to hexose transporter [Spinacia oleracea] (GB:AAF74565.1); similar to hexose transporter pGlT [Olea europaea] (GB:AAK62031.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.133908895074556 -1.63351810287325 0.131730727911943 1 1.24554065604122 20.8147744844000 -0.133908895074556 0.0335303081398657 AT5G11850_at 5.94294759214865 5.73658741128025 6.58479405905868 6.57016982642449 6.80840457779879 6.4860088731077 5.46945270785406 5.35674497202014 6.00603292667112 5.51057965431706 6.54393931077362 6.71263722065529 6.69971956675221 6.74738356669955 6.70773841142102 6.83293881999831 6.64126036048851 6.25423324068341 6.00778679161339 0.137775983662538 0.140594403883283 0.140724836838669 0.140586098127603 0.141357287916602 0.142117770972478 0.148740134927571 0.146592318985273 0.145000804740072 0.145382005328930 0.145111486885318 0.139514463029084 0.138900421103037 0.146402558438880 0.143603763221654 0.137775983662538 0.138015719728067 0.146080838164343 0.141567084940898 5 5|0 -|/ 3816965 3817921 3817469.3 3816347 3821073 - gene protein_coding_gene TRUE TRUE AT5G11850.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G73660.1); similar to EDR1 (ENHANCED DISEASE RESISTANCE 1), kinase/ protein threonine/tyrosine kinase [Arabidopsis thaliana] (TAIR:AT1G08720.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G18160.1); similar to CTR1-like kinase kinase kinase [Brassica juncea] (GB:AAP86285.1); similar to putative MAP3K delta-1 protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD17616.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.147001410981535 -1.63333759199145 0.131768984096438 1 1.24530521584998 12.3613626373205 -0.147001410981535 0.0691007113428344 AT5G52440_at 10.3972589719769 10.2160441017629 10.7807682544669 10.8141113566967 10.9641111527057 10.7771988978948 10.8456595028912 10.7093014704637 10.5693737031026 10.6607048470844 11.2868220491914 11.2555455574332 11.1359863936166 11.1535937784336 11.3126096539061 11.2351747476370 11.1717689878478 11.1689197838622 10.5468566476321 0.0798125226074683 0.0755373499092909 0.08070115689981 0.0780399338028285 0.0744113477086587 0.0774881356871355 0.0740305441402343 0.074472119473617 0.0856434698613675 0.0758113349994126 0.0759096137343124 0.0776307440346687 0.0756467991433883 0.0786807154094183 0.0776882732936815 0.0750490659853787 0.0751327631703127 0.078440467605543 0.0740305441402343 5 5|0 +|/ 21304309 21305802 21305013 21303986 21306130 + gene protein_coding_gene TRUE TRUE AT5G52440.1 HCF106 (High chlorophyll fluorescence 106) HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB similar to thylakoid assembly protein, putative [Arabidopsis thaliana] (TAIR:AT5G28750.1); similar to Bacterial sec-independent translocation protein mttA/Hcf106 [Medicago truncatula] (GB:ABE85329.1); contains InterPro domain Bacterial sec-independent translocation protein mttA/Hcf106; (InterPro:IPR003369); contains InterPro domain Twin-arginine translocation protein TatA/E; (InterPro:IPR006312); contains InterPro domain Twin-arginine translocation protein TatB; (InterPro:IPR003998) -0.139390535055486 -1.63307520389563 0.131824610336263 1 1.24496300937492 21.5917388894060 -0.139390535055486 0.0511844957420833 AT5G58230_at 7.14852495949636 7.24903073225566 8.61114601646353 8.08516041091108 8.33342447291587 8.43936237463497 7.13810353995137 7.0597435659717 6.611031539209 6.49184875285926 7.33108396704802 7.61786412819205 7.69774374945703 7.4315046290005 7.58755411099053 7.71257477325022 7.77898936904545 7.54691798630418 6.38320037921489 0.165603614832665 0.161021390771144 0.165406591512454 0.163168981835373 0.170552943738687 0.169172275805743 0.163475803625839 0.163474936613766 0.183905171031693 0.166933092614617 0.166949902541257 0.162675850910810 0.167510986244525 0.169192835217907 0.169452319823483 0.162163563555176 0.168946672460069 0.162698280902959 0.162588680895501 5 5 + 23574344 23575080 23574670.727 23573238 23575471 + gene protein_coding_gene TRUE TRUE AT5G58230.1 MSI1 (MULTICOPY SUPRESSOR OF IRA1) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. Identical to WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF IRA 1) (Protein medicis) (MSI1) [Arabidopsis Thaliana] (GB:O22467); similar to MSI2 (NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2) [Arabidopsis thaliana] (TAIR:AT2G16780.1); similar to WD-40 repeat protein [Pisum sativum] (GB:AAZ03745.1); similar to Glutathione S-transferase, C-terminal-like; WD40-like [Medicago truncatula] (GB:ABE90088.1); similar to WD-40 repeat protein MSI1 (GB:O22466); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Nitrous oxide reductase, N-terminal; (InterPro:IPR011045) 0.160850038254 1.6299807379424 0.132482210466577 1 1.24092954344026 14.7997566655361 0.160850038254 0.0954354331487916 AT5G53670_at 1.79768621714017 1.86964514230164 2.37141335806961 2.24941579064345 1.88233963097816 1.75020804299911 1.62429676294528 1.83233267294489 2.37303874804133 2.32039556167617 2.04706359472328 2.07144914329128 2.16980664461665 1.81146814758080 2.16978383061724 2.04389643210487 2.1055792772894 2.36102913307095 2.20180900033623 0.183875230789429 0.178208458541253 0.190051902999820 0.193330751254052 0.174996955719034 0.18172716046496 0.174996955719034 0.18786952503539 0.182105594890710 0.194263234534688 0.186552696973214 0.176392820602917 0.183705353375157 0.179713501700912 0.177682836332574 0.177794556992464 0.186613428680627 0.197480724641317 0.184688138796546 5 5 + 21814372 21814838 21814519.091 21814223 21814957 + gene protein_coding_gene TRUE TRUE AT5G53670.1 similar to transposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] (GB:AAP54011.1) -0.138280849022454 -1.62855054763887 0.132787120039314 1 1.23906682657352 4.12012918330098 -0.138280849022454 0.0491911313312928 AT5G12050_at 7.42246093646543 7.83985644518086 7.21570077062227 7.46871079968478 8.66690286755469 8.44552070524309 6.99734860661039 7.52434364314214 9.4344637598831 8.13266475055833 11.1197864330642 11.0842976721729 10.9944666583389 10.2602876294948 10.9354261577289 10.3232225707670 9.81478452883023 10.0713329634793 9.73499793490653 0.189449172253089 0.188532978342167 0.198985174778322 0.206226750576687 0.184036269311022 0.17750362159589 0.193493368879170 0.193523412325167 0.193637059366769 0.194971805656616 0.187516829458508 0.190031140417876 0.184926967111511 0.188156501706816 0.188581580365795 0.182272464603034 0.191824437832327 0.184661821406474 0.183879743807308 5 5 + 3890722 3891258 3890959 3890105 3891514 + gene protein_coding_gene TRUE TRUE AT5G12050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54200.1); similar to Os03g0175800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049135.1); similar to ATP-dependent DNA helicase, putative [Plasmodium falciparum 3D7] (GB:NP_702167.1) 0.183243997588133 1.62658475318208 0.133207233245241 1 1.23650803190260 17.5356852927382 0.183243997588133 0.130075294020147 AT5G61750_at 1.34067929344784 1.47204481945190 1.4175797259477 1.69243636823661 1.53741886050713 1.61125331652306 1.30760348683108 1.07475108562480 1.4783329232543 1.14787447929393 1.63757614218196 1.15425258249779 1.85016049917587 1.51784614759396 1.41517762044943 1.23415511363350 1.43703342786618 1.58424000978664 1.16522240043911 0.194673604769969 0.193935885020743 0.194127691007740 0.196133838149448 0.197309220362050 0.192868793086219 0.198619647448608 0.202610214903362 0.198945993865528 0.194146090281874 0.192868793086219 0.197054896218032 0.193227121492130 0.194872780366951 0.196446057301497 0.19593795497304 0.196052051515981 0.192868793086219 0.201018437174002 5 5 - 24830061 24830605 24830365.818 24830030 24830662 - gene protein_coding_gene TRUE TRUE AT5G61750.1 cupin family protein Identical to Putative germin-like protein subfamily 3 member 4 precursor [Arabidopsis Thaliana] (GB:Q9FLT3); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39150.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G39180.1); similar to Germin-like protein subfamily 3 member 4 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94088.1); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) 0.145332761794794 1.62271571161583 0.134037535241974 1 1.23147696654574 2.80302843318490 0.145332761794794 0.0675744322077081 AT5G44190_at 10.3222618208222 10.2634201990984 11.3246019893641 11.3116489528 11.7909153953824 11.641388838468 11.0937231875940 11.2767407734062 10.9909195902459 10.8865967903033 11.6114337072356 11.4252517894730 11.7828545784103 11.6827131545381 11.1201848877144 11.5723223214056 11.3941338506178 11.4790369089625 10.7699603423928 0.0739945498045139 0.0723505676399051 0.0698832433106309 0.0724405874290982 0.0695047181302999 0.0720689653079634 0.0727076136886443 0.0723541093047232 0.0761588530558887 0.0698120673119314 0.0689642883333561 0.0685727241646549 0.0690409896997684 0.0685727241646549 0.0713600867174685 0.0685727241646549 0.0734566263023088 0.0727837153399204 0.071511572636063 5 5 + 17816606 17817795 17817147.273 17815596 17818051 + gene protein_coding_gene TRUE TRUE AT5G44190.1 GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1. Transactivates transcription in yeast, similar to the yeast Golden2 transcription factor that is required for photosynthetic differentiation. similar to GPRI1 (GOLDEN2-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G20570.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE89013.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.135395685036093 1.62194736153616 0.134202968930722 1 1.23047865918679 22.3235794650046 0.135395685036093 0.0422068034151921 AT5G09790_at 2.98124539368183 3.33110292446197 3.78631015533307 3.72911131684347 3.29868408035522 3.36532945300863 2.94145651110446 2.65459085921564 2.95478851454894 3.09785418275217 3.49600585623986 3.75572733659353 3.01144499628981 3.52395250310681 3.79461802678571 3.68799214792466 3.27159091213822 3.21164013230481 3.76314433821442 0.211939929561789 0.210435735601624 0.205833177714560 0.219677604472549 0.208836734045747 0.207584958941779 0.207310744270477 0.220524109809992 0.205833177714560 0.208002596310314 0.208416249319511 0.212163525811347 0.207322125526659 0.211379902677520 0.208045317127812 0.212402823626264 0.207005270510837 0.211718350957285 0.207398014756488 5 5 - 3039279 3040034 3039645.545 3038979 3041045 - gene protein_coding_gene TRUE TRUE AT5G09790.1|AT5G09790.2 ATXR5 (Trithorax- related protein 5); DNA binding|ATXR5 (Trithorax- related protein 5) Encodes a SET-domain protein. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. Identical to Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43) (Trithorax- related protein 5) (TRX-related protein 5) (Protein SET DOMAIN GROUP 15) (ATXR5) [Arabidopsis Thaliana] (GB:Q8VZJ1;GB:Q9FXW6;GB:Q9LXE2); similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to Os01g0965500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045494.1); similar to Nuclear protein SET; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE94382.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965)|similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to Os01g0965500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045494.1); similar to Nuclear protein SET; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE94382.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) -0.151219362180261 -1.62126410107132 0.134350233834952 1 1.22959113303833 6.63150408713126 -0.151219362180261 0.0797565196088557 AT5G05190_at 6.40303107703605 6.68969457672472 7.74394953387142 7.98111567391891 6.80939687777859 7.04994299279467 4.52587742090963 5.09519277523556 5.61591000973065 5.13514853019962 6.37008317884522 6.4180439052978 6.33985509152672 5.98233911863512 5.92259716811728 5.98710034683647 5.49704131038813 6.20095885886219 5.36915367916412 0.225544381011867 0.226727403106276 0.23501913280673 0.226033013045270 0.224604648885802 0.242349419455475 0.228661465018102 0.241549233676945 0.249727129766235 0.236886127546051 0.224604648885802 0.228802285821185 0.229232558498809 0.228166542186827 0.226976504333773 0.229921193110559 0.240854863631684 0.231116769335333 0.232522293652554 5 5 + 1543285 1543841 1543602.091 1541522 1544138 + gene protein_coding_gene TRUE TRUE AT5G05190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61670.1); similar to Os02g0464500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046806.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19834.1); similar to Os03g0334200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050029.1) 0.178846601379791 1.6200774885403 0.134606327616721 1 1.22805027869691 12.2688533387062 0.178846601379791 0.124840217470181 AT5G46310_at 0.843900586504947 1.10086208426137 1.15513621276256 1.38771943308764 1.40484741275381 1.39658568287580 0.89849142005647 1.26288976052475 0.81941391872039 1.37087445028155 1.29556562516079 0.949152459561644 1.22705915532152 1.50995508720913 0.603176999785736 1.63119975192996 1.83190323330947 0.9338120551121 1.08977236932243 0.224528497804258 0.224528497804258 0.229483413670867 0.224528497804258 0.226950883018273 0.234617578497265 0.229551499831146 0.224528497804258 0.233959217085219 0.226206830509401 0.228010040027183 0.224528497804258 0.230482704202370 0.226077706217499 0.227384888134675 0.226434019838449 0.230883211850384 0.229473640428071 0.229867362573685 5 5 + 18803424 18804140 18803893.455 18802899 18804183 + gene protein_coding_gene TRUE TRUE AT5G46310.1 WRKY family transcription factor 0.155019843963441 1.61979726795594 0.134666867653322 1 1.22768649685423 2.35184488678604 0.155019843963441 0.087041261510647 AT5G48485_at 9.03267374490436 9.23199493802668 8.91052966857402 9.35341525629252 9.62348106417201 9.57785857511105 7.81435368460889 8.36036517142252 8.83943922975511 7.99818570381864 9.85853361917456 10.0246623571376 9.36773432673938 9.18677191444496 9.87083953784747 9.7562643270891 9.29753802588926 9.73411274087123 8.63718485310523 0.131965611675505 0.124627767529427 0.127181467079106 0.125349024024713 0.123217260669295 0.136719788968681 0.150064736563211 0.132921044041841 0.145768809657543 0.147602566385464 0.122769165610251 0.123527170217080 0.126479738456666 0.128365766888476 0.125322320520082 0.122769165610251 0.136520956423290 0.131979733668498 0.128427626246165 5 5 - 19663554 19663812 19663687 19663458 19664028 - gene protein_coding_gene TRUE TRUE AT5G48485.1 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1); lipid binding encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G48490.1); similar to Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor [Medicago truncatula] (GB:ABE79318.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 0.180005865635983 1.61883045941763 0.134875926142270 1 1.22643166243906 18.0524141970768 0.180005865635983 0.126707043760417 AT5G65790_at 1.32445763661505 1.35692518934051 1.16893844506735 1.31636965287384 1.09154654824639 1.37416794440895 0.818441752015733 1.70278191168368 1.81466398978724 1.38345415607634 1.57025292844114 1.25900428208916 1.14296914409613 1.39277704146739 1.7480957031887 1.39872493766834 1.42049700493258 1.53275962393548 1.58537601095594 0.191789061672827 0.197621402065569 0.194537650573583 0.194160915362815 0.190936388779001 0.202183678847895 0.192343865544873 0.196475882741365 0.193839588331017 0.194239266809528 0.191884228651572 0.194361922003769 0.205763527706585 0.207313707558279 0.198332506013379 0.200578068799058 0.206161486654042 0.192251016860073 0.199811842882786 5 5 + 26341053 26341580 26341261 26340174 26341804 + gene protein_coding_gene TRUE TRUE AT5G65790.1 MYB68 (myb domain protein 68); DNA binding / transcription factor Encodes a putative MYB transcription factor. similar to ATMYB84/MYB84/RAX3 (myb domain protein 84), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G49690.1); similar to MYB transcription factor MYB161 [Glycine max] (GB:ABH02906.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.206303972894686 -1.61533128280760 0.135634976087846 1 1.22189359743014 2.78302020278171 -0.206303972894686 0.162774675370644 AT5G09690_at 3.02775788884344 3.21537667551020 3.63146803924258 3.65882197811069 4.3668923397349 3.49677563662535 2.34225797633536 2.59585427384567 2.88784972946001 3.16099963503872 3.80840374714535 3.71195560641598 3.64062839955577 3.59024148029369 2.87823826306938 3.86970382402984 3.34647667647933 3.85853840788629 3.2616178942522 0.215060899334921 0.218034277673056 0.225468549350062 0.219474055464190 0.23316088354638 0.224907905262625 0.224336402370105 0.218767671712364 0.222138456311657 0.215060899334921 0.215060899334921 0.224063055226972 0.222541237747385 0.227698402709409 0.215060899334921 0.223265795628931 0.228178321498572 0.217983742823966 0.220360834459748 5 5 - 3001009 3001884 3001394.545 3000810 3003501 - gene protein_coding_gene TRUE TRUE AT5G09690.1|AT5G09690.2|AT5G09690.3|AT5G09690.4 magnesium transporter CorA-like family protein (MRS2-7) similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.1); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523)|similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.1); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain CheW-like protein; (InterPro:IPR002545); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523)|similar to magnesium transporter CorA-like family protein (MRS2-2) [Arabidopsis thaliana] (TAIR:AT5G64560.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98804.1); contains InterPro domain CheW-like protein; (InterPro:IPR002545); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) 0.204131896317569 1.61371969761639 0.135985834369969 1 1.21980542366848 6.6376567944609 0.204131896317569 0.160238078661206 AT5G17880_at 8.1041579683382 8.30250529697074 8.85644120584625 8.75424668436727 8.87731541620028 8.66654701866487 6.90360408303356 6.87454484498388 8.22951443476271 7.44367439748545 8.01299031681226 8.5719176631011 8.03057084280799 7.97903165460664 7.99709316422853 8.24778513323976 8.1381657439545 8.26687435363329 7.9360587609124 0.144905328467572 0.135723101825974 0.144031488035092 0.139896860846689 0.139731389951757 0.142342447219316 0.139322884808166 0.138714917059850 0.154255576164462 0.147940205072489 0.142199963988637 0.139239529189948 0.139378248388299 0.144536741682496 0.141487652385738 0.139917355538322 0.140788777617478 0.148435529335383 0.14332121270452 5 5 - 5908893 5909504 5909205.364 5908876 5913101 - gene protein_coding_gene TRUE TRUE AT5G17880.1 CSA1 (CONSTITUTIVE SHADE-AVOIDANCE1); ATP binding / protein binding / transmembrane receptor Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) -0.138544935792316 -1.61370089372992 0.135989932897875 1 1.21978106599496 16.1800717181847 -0.138544935792316 0.0533539455615961 AT5G39430_at 1.05433210406814 0.792939982116002 1.19255413580305 1.28574098281788 0.953326921624786 0.934588896458532 0.765445196751481 0.840611646477622 0.932819044890622 1.20047368220442 1.04276915144079 1.22146540487854 1.22899416289342 1.45975669111751 1.30312848395863 1.17082425086312 1.53729636900393 1.18715275098061 1.11300831079995 0.210076330153183 0.211688044732755 0.210076330153183 0.211125586170914 0.218347898803686 0.210076330153183 0.214541352257190 0.215343734471024 0.212963417517327 0.210459570748371 0.228584788895738 0.224363759159452 0.214883954833167 0.211838450998984 0.217526822756626 0.210076330153183 0.214931987338783 0.221756194981035 0.217778933528932 5 0|5 /|- 15792565 15793344 15792923.286 15792530 15794827 - gene protein_coding_gene TRUE TRUE AT5G39430.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29180.1); similar to Os12g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067115.1); similar to Os03g0759000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051338.1); similar to Protein of unknown function DUF1336 [Medicago truncatula] (GB:ABE78635.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769) 0.137089214476648 1.61172034953870 0.136422227851532 1 1.21721646992594 2.15295436031822 0.137089214476648 0.0498597902405641 AT5G61940_at 2.08905557932861 2.42263252656920 2.53316667748909 2.58810287604157 2.23208041967681 1.80436260336235 1.55206307439619 2.01792741766914 2.19888355998115 2.43197644776970 2.51246366332088 1.93030970590232 2.56428712300440 2.3046726710336 2.35350102522088 2.00583798805529 2.12868258195821 2.18422056432829 2.67749960471895 0.184703376563975 0.177492998832409 0.180572662277529 0.186416073098418 0.177318793284415 0.180088817806924 0.177528912907723 0.189723245784816 0.177492356880082 0.184852266367534 0.179955275495483 0.180645072928958 0.184215572465607 0.180848710735947 0.177318793284415 0.181012258382364 0.177318793284415 0.185342899138313 0.187497148140307 5 5|0 +|/ 24888765 24889919 24889200.8 24885381 24889943 + gene protein_coding_gene TRUE TRUE AT5G61940.1 ubiquitin carboxyl-terminal hydrolase-related similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G51530.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT5G61950.1); similar to ubiquitin carboxyl-terminal hydrolase-related [Arabidopsis thaliana] (TAIR:AT1G52450.1); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94151.1); contains InterPro domain Protein of unknown function DUF627; (InterPro:IPR006866); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394); contains InterPro domain Protein of unknown function DUF629; (InterPro:IPR006865) -0.177353652063994 -1.61115713573393 0.136545382629607 1 1.21648749622381 4.49698228990474 -0.177353652063994 0.124101272774460 AT5G44340_at 11.0920315767834 11.2658611565609 11.052154194243 11.1148021421153 11.2924846675606 11.2868114660851 10.6870666952758 11.0238319222311 11.5765978087659 10.9228527302588 12.4003913288338 12.2034773972108 11.7965693860073 11.9458560733869 11.9979838354472 11.5416642891148 11.0633388205864 11.7526223216146 11.0542258810260 0.0731755585235477 0.0712963432925474 0.0757714690230141 0.0739658945659432 0.0712972706862993 0.0735842572024574 0.0720814221457834 0.0751964028051098 0.0794477425550943 0.0717888946346458 0.0722232348832006 0.0712963432925474 0.0721899803087304 0.0712963432925474 0.0730176983668636 0.0712963432925474 0.0800697646798952 0.0762555430491817 0.0721183356119997 5 5 - 17876708 17877175 17876960.182 17876422 17878328 - gene protein_coding_gene TRUE TRUE AT5G44340.1 TUB4 (tubulin beta-4 chain) beta tubulin gene Identical to Tubulin beta-4 chain (Beta-4 tubulin) (TUBB4) [Arabidopsis Thaliana] (GB:P24636;GB:Q9FKV4); similar to TUB7 (tubulin beta-7 chain) [Arabidopsis thaliana] (TAIR:AT2G29550.1); similar to TUB6 (BETA-6 TUBULIN) [Arabidopsis thaliana] (TAIR:AT5G12250.1); similar to TUB9 (tubulin beta-9 chain), structural molecule [Arabidopsis thaliana] (TAIR:AT4G20890.1); similar to beta-tubulin (GB:AAA32757.1); similar to Tubulin/FtsZ family, GTPase domain, putative [Medicago truncatula] (GB:ABE90057.1); similar to Tubulin beta-3 chain (Beta-3 tubulin) (GB:Q40665); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) -0.143753892936733 -1.61065518512715 0.136655224136623 1 1.21583793898603 22.6130288467113 -0.143753892936733 0.066481937788544 AT5G17370_at 3.40677484892435 3.85093979627780 3.90555259900254 4.03788740187928 5.16076729556884 3.87606321497982 3.56349718297542 3.51806325402331 3.36186630623309 3.90338887463434 3.38304917474478 3.68618806496611 4.08559108429466 3.39668934244864 3.40558855847963 3.57903276251177 3.85900008960671 3.98844518160094 3.26398824681261 0.266414291157163 0.262733820861910 0.268715514624405 0.266152083230758 0.273034205880286 0.267415033017844 0.255355699231060 0.255355699231060 0.277820782168191 0.265708908428698 0.257711416289779 0.255355699231060 0.259748956583687 0.262453403255252 0.269758223660672 0.258710223763201 0.264757875009768 0.255355699231060 0.263546205861181 5 5|0 -|/ 5721836 5723094 5722398.2 5721803 5724721 - gene protein_coding_gene TRUE TRUE AT5G17370.1 WD-40 repeat family protein similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG01812.1); similar to Os07g0108000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058713.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.266397423342278 -1.60830964938811 0.137169531735744 1 1.2128041971872 7.50629111998309 -0.266397423342278 0.236479297326327 AT5G50400_at 7.18185145433011 7.64703189295194 8.5611977063289 8.70904251994506 9.09161394540585 8.73510583763865 7.5627154683027 7.59800751574353 7.07193558584736 7.01629354746686 7.83648380480737 7.45082597626187 8.44456685675901 8.19422872222196 7.4050453164132 8.61384118093982 8.70213365935338 8.04849426779976 7.40960594966422 0.1614518715963 0.149098971715150 0.153901585224812 0.154199574904546 0.159174754753645 0.165628636372229 0.154448788347901 0.151130472119126 0.155700121677421 0.162769914676011 0.149098971715150 0.149488180887464 0.1563709120637 0.157374992660707 0.167362829576858 0.153167081357240 0.161455733449093 0.159099772641621 0.155921570336967 5 5 - 20540802 20541374 20541063.455 20540801 20543695 - gene protein_coding_gene TRUE TRUE AT5G50400.1 ATPAP27/PAP27 (purple acid phosphatase 27); acid phosphatase/ protein serine/threonine phosphatase similar to ATPAP24/PAP24 (purple acid phosphatase 24), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G24890.1); similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G13750.1); similar to putative metallophosphatase [Lupinus luteus] (GB:CAD12839.3); similar to putative metallophosphatase [Lupinus luteus] (GB:CAD12837.1); similar to diphosphonucleotide phosphatase 1 [Lupinus luteus] (GB:CAD12836.1); contains InterPro domain Purple acid phosphatase, N-terminal; (InterPro:IPR008963); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.164273213794780 1.60732554912095 0.137385824987034 1 1.21153210578014 15.7622695429454 0.164273213794780 0.104779488470853 AT5G42640_at 0.628980227011112 0.443455845503756 0.98774451928405 0.849116759282741 0.566821373969368 0.692255779233967 0.690495741356165 0.602830195359226 1.06864161321942 1.20574902893482 0.608891973261358 0.739436565585498 0.749992784699061 0.645251100838842 0.725167386150284 0.659880775881575 0.418709182290964 0.801113701799122 0.76598715710892 0.190363191692621 0.190547566666795 0.196249138923366 0.191912190883771 0.191267174249280 0.194701405577959 0.197277056760313 0.195172836728627 0.199039329511819 0.189591264644746 0.203110558455291 0.192371107033016 0.196088799651911 0.189591264644746 0.189591264644746 0.192570550196295 0.200095835969087 0.191446767641988 0.204244256734188 5 5 + 17106260 17106665 17106479.091 17105923 17106825 + gene protein_coding_gene TRUE TRUE AT5G42640.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G15740.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.136076325303971 -1.60731844582481 0.137387387299452 1 1.21152292536986 1.52371990524224 -0.136076325303971 0.0480381761296218 AT5G59720_at 1.50832691182796 1.38279111983847 1.67386993258278 1.18566914151175 1.13237841579897 1.26395221689619 1.79072766806426 1.32338831961608 1.15394937920357 1.55872154062356 2.0054368934334 2.40722864374160 1.98178019037007 1.78181384036743 2.74363123125104 2.22472447901145 1.90029623094780 2.40934573302415 1.52917210185660 0.215073758842203 0.213732824515216 0.211367598415541 0.226524823393260 0.214194252681367 0.218893094781772 0.211314421402472 0.214192658044753 0.218613285362844 0.226081571384427 0.214749131752293 0.211694121771871 0.212988227081159 0.221223291764753 0.216839921611329 0.220249976395759 0.223728464134506 0.212585035633817 0.222665847687318 5 5 + 24079858 24080318 24080075.545 24079803 24080503 + gene protein_coding_gene TRUE TRUE AT5G59720.1 HSP18.2 (HEAT SHOCK PROTEIN 18.2) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock. Identical to 18.2 kDa class I heat shock protein (HSP 18.2) (HSP18.2) [Arabidopsis Thaliana] (GB:P19037); similar to 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) [Arabidopsis thaliana] (TAIR:AT1G53540.1); similar to low molecular weight heat-shock protein [Brassica rapa] (GB:AAB72109.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.174887468918930 1.60721476301277 0.13741019327988 1 1.21138892674258 3.20550288034853 0.174887468918930 0.121115639268749 AT5G65220_at 9.07168240746807 9.32950608081346 9.20636517255214 9.21968956790048 9.80441927183865 9.6546403012691 9.00499648061823 9.1123980859515 9.02076113625436 9.32267849770252 10.1881883664991 10.4072766756328 9.69399903783901 10.0496528007701 10.3962668373005 10.1037873939697 9.4674241294921 9.72603598704449 9.19328621881209 0.135044295908967 0.13124332417055 0.138060522467314 0.129738555871756 0.135461924138256 0.150469330073070 0.139649683176077 0.130164928704597 0.148984871875934 0.134246987772496 0.132806386201772 0.131590811152479 0.131025078755503 0.131096118623356 0.139665677856514 0.132195709053704 0.133847296609301 0.140354150670078 0.142151643906383 5 5 + 26078540 26079659 26078850.909 26078455 26079908 + gene protein_coding_gene TRUE TRUE AT5G65220.1 ribosomal protein L29 family protein Identical to 50S ribosomal protein L29, chloroplast precursor (CL29) (RPL29) [Arabidopsis Thaliana] (GB:Q9FJP3); similar to 50S ribosomal protein L29, chloroplast precursor (CL29) (GB:Q9SWI6); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) -0.138535231193198 -1.60673415792475 0.137515950429612 1 1.21076786233413 18.8919559316305 -0.138535231193198 0.054893918895382 AT5G53320_at 1.55984238206845 1.57044596222841 1.80514500634868 1.85715950104584 1.42423433317833 1.98069404901700 1.02502308612578 1.51390166443995 1.20170051560898 1.23695107004868 1.22855802206453 1.40427828293198 1.45349999163049 1.78976274886886 1.48968200449436 1.31139214085841 1.56945481350506 1.31182123862393 1.25793386346038 0.207983474652467 0.205836448055574 0.211671009951479 0.215674734240007 0.210408583447966 0.217173699769385 0.205194172408079 0.209754794904862 0.209723197138187 0.209230717195867 0.205194172408079 0.205194172408079 0.210779112939998 0.207890536374669 0.207815661079722 0.212773817482416 0.215488825256235 0.205194172408079 0.209218768565251 5 5 - 21653687 21654208 21653949.545 21653467 21655624 - gene protein_coding_gene TRUE TRUE AT5G53320.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G24100.1); similar to putative receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAA94519.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.179672442613607 1.60457212611762 0.137992595013799 1 1.20797528505010 2.93055640059566 0.179672442613607 0.128511892156531 AT5G52140_at 1.75648485315303 1.95519631718208 2.42358727031756 2.98286580858967 1.73508509301445 2.14598071620205 1.49036593344004 2.21791968954893 2.06151671408317 2.39724456537169 1.80826039560494 1.78688207896383 1.49387127915192 2.02051305995941 1.80701885271689 1.65584914979243 1.80040587856836 2.41400003829476 2.66335078441819 0.235229789558495 0.235729868838494 0.242450314570727 0.248500067701204 0.236264405715246 0.238561551205949 0.230277832344645 0.233158078503618 0.241346034304291 0.231966013491479 0.241587426149559 0.240061811984454 0.234366365798564 0.230277832344645 0.23782971450564 0.238356598677590 0.231523702458368 0.241853676111725 0.236189620211468 5 0|5 /|- 21201763 21203324 21202634.875 21201748 21204098 - gene protein_coding_gene TRUE TRUE AT5G52140.1 protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G52150.1); similar to Os03g0173900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049123.1); similar to OSIGBa0111L12.9 [Oryza sativa (indica cultivar-group)] (GB:CAH67282.1); similar to hypothetical protein [Tetrahymena thermophila SB210] (GB:XP_001032749.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.215907357776723 -1.60095281813424 0.138793777361231 1 1.20330526714646 4.19962943330894 -0.215907357776723 0.177366122639088 AT5G19130_at 5.6806454628329 6.03725179213401 6.77690139514122 6.9838555530146 6.7906354832866 6.66079185257499 5.58064796029598 5.50106137766154 5.15953560662144 5.005342515619 6.52990676889759 6.24045802890976 6.54198903128191 6.30118393670111 6.26998255705765 6.33905629295932 5.99566881550858 6.04989378411956 4.95488824001923 0.212107168938233 0.201825775564381 0.205645324445431 0.205952786157646 0.203992721704143 0.201278005708276 0.204081695727638 0.206743054371145 0.221028855985785 0.200964026088325 0.207037669942587 0.20053547378224 0.206958376375293 0.208640750111302 0.202071311443718 0.204524910154144 0.224365676889648 0.214255044774330 0.206147569271850 5 5 - 6416167 6416696 6416461.909 6415922 6419037 - gene protein_coding_gene TRUE TRUE AT5G19130.1|AT5G19130.2 GPI transamidase component family protein / Gaa1-like family protein similar to glycosylphosphatidylinositol anchor attachment 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAC01259.1); contains InterPro domain Gaa1-like, GPI transamidase component; (InterPro:IPR007246) 0.147307899248362 1.59945149911505 0.139127316884237 1 1.20136988853417 11.9131936209591 0.147307899248362 0.0760636749515631 AT5G50930_at 2.3554988749826 2.31871546218147 3.28489686716383 3.13435979030730 2.5118617432566 2.63269403934150 2.56394685431102 2.1841901112291 2.25150330726762 2.12826350539573 2.7180123336445 2.97863531279988 2.82521711289299 2.76097006136823 3.1426750375452 2.94088514619866 2.64711081130009 2.27987789751608 2.85896473218878 0.216742982002275 0.207879424001312 0.218327822717424 0.212041845364149 0.205610254203212 0.205610254203212 0.210798482004777 0.205610254203212 0.212718556790984 0.222597986840764 0.206363876849084 0.208317407584333 0.211665854062906 0.209566767627132 0.206152002895720 0.206657708618917 0.210001495491797 0.219275180727338 0.223741393986866 5 5|0 +|/ 20739793 20741506 20740603.333 20739295 20741661 + gene protein_coding_gene TRUE TRUE AT5G50930.1 similar to OSJNBa0039C07.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05152.2); similar to Centromere protein S (CENP-S) (Apoptosis-inducing TAF9-like domain-containing protein 1 homolog) (GB:Q6NRI8); similar to Os04g0397700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052668.1); contains InterPro domain Histone-fold; (InterPro:IPR009072) 0.146267038101967 1.59924708062657 0.139172786016585 1 1.20110644985591 5.22306220740114 0.146267038101967 0.0739958063736438 AT5G63770_at 4.14984288943399 4.12404905579069 5.12751878757227 5.14237392450235 5.17283251466863 4.9343395780414 4.05139067389208 3.96592440426824 3.43007424045367 3.79356221041532 4.93302944321109 4.81446426910308 4.55989827752491 4.51399180592264 4.55901443771501 4.87582742356833 4.60405323655235 3.65533685847119 3.81896559116564 0.207383040158949 0.208017703925729 0.203976759166719 0.206169984298372 0.208502891987866 0.205048556223622 0.207408511374483 0.203216672582037 0.209534577763952 0.210404532274358 0.203876792795894 0.205857000929307 0.206039684734548 0.204350542965589 0.211226546681582 0.203216672582037 0.214300353341022 0.20908917072478 0.206083308244056 5 5|0 +|/ 25538457 25539598 25539245.667 25535867 25540847 + gene protein_coding_gene TRUE TRUE AT5G63770.1|AT5G63770.2 ATDGK2 (DIACYLGLYCEROL KINASE 2); diacylglycerol kinase|ATDGK2 (DIACYLGLYCEROL KINASE 2) a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. similar to DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G07920.1); similar to Diacylglycerol kinase accessory re (GB:ABE86193.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21922.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96787.2); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219)|similar to DGK1 (DIACYLGLYCEROL KINASE 1, DIACYLGLYCEROL KINASE1), diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT5G07920.1); similar to Diacylglycerol kinase accessory re (GB:ABE86193.1); similar to Diacylglycerol kinase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96787.2); contains InterPro domain Diacylglycerol kinase accessory region; (InterPro:IPR000756); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219) 0.134053677894953 1.59863371908894 0.139309295667652 1 1.20031611379937 8.70619363669793 0.134053677894953 0.0441439894111572 AT5G64230_at 2.80473697171616 3.09612427727518 4.1096547530628 4.09224211373005 5.24582156267275 4.63310208046324 4.97669367561208 5.2963269822568 3.63896386406825 3.85673134795265 4.14477199605275 3.90689421620615 4.54031130850904 5.15823009676548 3.71217868073155 5.66915909238388 5.036959950649 4.49133629767592 3.98463660620467 0.260427881126843 0.250253957316325 0.250872428901201 0.239751279807569 0.246627368154991 0.257139770582663 0.246568546171029 0.250963863661701 0.243073559414695 0.237588349241724 0.243921854470355 0.240848340881801 0.244247039995869 0.245015572494621 0.248141869428133 0.248372453140126 0.253202340362378 0.237588349241724 0.24610422579747 5 5|0 +|/ 25710405 25711072 25710676.2 25709679 25711279 + gene protein_coding_gene TRUE TRUE AT5G64230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19920.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71289.1) -0.179919633581495 -1.59862126507008 0.139312068654798 1 1.20030006820921 8.48646654090542 -0.179919633581495 0.129825647596111 AT5G66120_at 9.32618641800082 9.2955203327694 10.0225384087342 10.1241093231706 9.83063090889946 9.60359268259638 9.65655217713476 9.78323767176581 9.31149511417735 9.47913536369685 10.054707067038 10.1156519675591 10.0433459817581 10.0416053119756 10.1365059699483 10.1551546396571 9.9792237290378 9.94782933974752 9.16636106405619 0.105923601183558 0.101194984708313 0.102602320223688 0.101194984708313 0.102916867397406 0.116405251644412 0.101590142420132 0.104716848284528 0.120286488097257 0.102717628607446 0.105092227966131 0.101194984708313 0.101194984708313 0.105483737195777 0.102101801573485 0.101194984708313 0.112109169698918 0.113573991467732 0.111799492093613 5 5|0 -|/ 26448758 26449664 26449167.889 26448602 26451004 - gene protein_coding_gene TRUE TRUE AT5G66120.1|AT5G66120.2 3-dehydroquinate synthase, putative similar to putative 3-dehydroquinate synthase [Fagus sylvatica] (GB:ABA54866.1); contains InterPro domain 3-dehydroquinate synthase AroB; (InterPro:IPR002658)|similar to dehydroquinate synthase [Lycopersicon esculentum] (GB:AAL77575.1); similar to Os09g0539100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063802.1); similar to putative 3-dehydroquinate synthase [Fagus sylvatica] (GB:ABA54866.1); contains InterPro domain 3-dehydroquinate synthase AroB; (InterPro:IPR002658) -0.135484862769639 -1.59806614230197 0.139435720633818 1 1.19958492885083 19.3944210811258 -0.135484862769639 0.0485949791444149 AT5G55670_at 5.49506100350216 4.86103517056013 5.79548894547482 5.83825635110679 6.33194808706759 6.08617839936587 4.71256602953702 5.39384920541667 5.57370611280923 5.15038770620215 5.70209684966323 5.76262347743021 5.88694518726607 6.23776960517456 6.1433822957457 6.23336538651593 5.89520207308446 5.93004622351706 5.1725447397881 0.171020206496040 0.178228301580723 0.177427757812977 0.187302741203394 0.196023477743597 0.185222481080097 0.180356046540965 0.181016343029551 0.171020206496040 0.193159779543145 0.173806697875471 0.174528279397558 0.181515419833669 0.172104075407939 0.171020206496040 0.175053341992758 0.182719220924499 0.171536998859832 0.177483567023715 5 5 - 22561895 22562445 22562146.182 22561166 22564027 - gene protein_coding_gene TRUE TRUE AT5G55670.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT1G13190.1); similar to Os08g0490300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062111.1); similar to Os09g0476100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063463.1); similar to hypothetical protein DDBDRAFT_0205004 [Dictyostelium discoideum AX4] (GB:XP_639372.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.207086177384762 -1.59744047775579 0.139575201570672 1 1.19877908576813 11.2007021024536 -0.207086177384762 0.166741317388173 AT5G63330_at 6.64314503009901 6.97439495852031 7.9886706396297 8.04099734514283 8.29579713422622 8.0767795015047 7.25491338870425 7.42950606547034 6.5264788312387 6.2977553022774 7.81504508590437 8.2147269443595 8.2663615112468 7.67656501975347 7.0107688659621 8.06795425201333 7.85388843945963 7.73634515901554 6.88793700968301 0.202027090714283 0.184419324052216 0.193999622904015 0.185705786034414 0.193115411207389 0.18888499645842 0.188268869760660 0.186612464769525 0.199951072842867 0.195603312964753 0.194670589548788 0.184419324052216 0.191100653341544 0.201720419717155 0.20391031255309 0.184419324052216 0.190939658766247 0.184419324052216 0.202029560800982 5 5 - 25394416 25395148 25394730.091 25394322 25396523 - gene protein_coding_gene TRUE TRUE AT5G63330.1|AT5G63330.2 DNA-binding bromodomain-containing protein|DNA binding similar to ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9), DNA binding [Arabidopsis thaliana] (TAIR:AT5G14270.1); similar to global transcription factor group E [Zea mays] (GB:AAO84020.1); similar to putative global transcription factor group E [Oryza sativa (japonica cultivar-group)] (GB:BAD19338.1); contains InterPro domain Bromodomain; (InterPro:IPR001487) 0.146884243557633 1.59727903401280 0.139611212580329 1 1.19857117914767 14.7884908199692 0.146884243557633 0.0756143784249109 AT5G01160_at 5.89839544519629 5.80251859929886 6.18524781442684 6.66582314966146 7.21993558954584 7.12108582921474 5.2266499516274 5.07102448719426 5.84182996025363 5.17789676276184 5.99658756639554 5.86004904497363 6.10591985573355 6.02353084616343 5.91684072550654 5.99760751907228 5.96303970017991 6.22791375503912 5.67665641102043 0.215316300025965 0.218083172070615 0.230544584574684 0.219465538705318 0.215120696758442 0.226787056773117 0.216896676358118 0.221224218504130 0.222253074286237 0.218132375234180 0.213635011740655 0.213458270545862 0.225008103415083 0.213458270545862 0.213458270545862 0.214404301961384 0.218443811720892 0.225340696449833 0.221498873515697 5 5 + 55146 55699 55362.818 54009 55855 + gene protein_coding_gene TRUE TRUE AT5G01160.1 e-cadherin binding protein-related similar to Os10g0494500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064945.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG13991.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.154840277903343 -1.59717107699007 0.139635297620848 1 1.19843215929388 11.9372836939265 -0.154840277903343 0.090607889206441 AT5G24840_at 4.75419311132508 5.35271693944204 5.64287680337476 5.97014506053981 5.88369063939804 5.47578533144972 5.16599380895214 5.28233737218380 4.13504510474712 3.91226946211778 5.16631921925429 5.37303180827147 4.77026480935011 4.89462907170823 5.47159712785544 4.76510812278463 5.36198898920637 4.70181988108522 4.48293225542628 0.221680886535809 0.220298961940337 0.226140560518507 0.223027291885993 0.217579030458447 0.230060445060438 0.222954637111607 0.220622341359071 0.236156460856004 0.229833119878195 0.226462137907077 0.220913250153012 0.230695050000748 0.225743334650780 0.217579030458447 0.217579030458447 0.241295208908497 0.217754854816979 0.221917048945166 5 5 - 8533900 8534440 8534159.091 8533790 8535046 - gene protein_coding_gene TRUE TRUE AT5G24840.1 methyltransferase Identical to Probable tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA(m7G46)-methyltransferase) [Arabidopsis Thaliana] (GB:Q8GXB7); similar to methyltransferase [Arabidopsis thaliana] (TAIR:AT5G17660.1); similar to Putative methyltransferase [Medicago truncatula] (GB:ABE93367.1); contains InterPro domain Putative methyltransferase; (InterPro:IPR003358); contains InterPro domain Conserved hypothetical protein 91; (InterPro:IPR004395); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) -0.186216767962245 -1.59677695254787 0.139723257255602 1 1.19792467824736 10.0608892930598 -0.186216767962245 0.139011252487706 AT5G56460_at 1.77123576176564 2.07163119353620 2.61632890030832 2.67267002965265 2.57280879019412 2.91029163394971 2.60915266848701 2.18718675202448 2.85785246133155 1.99359991874762 2.91297242312348 2.62305762075157 2.85690660616952 2.57290996980461 2.80649382174993 2.47676203766915 2.83848644545177 2.51033397444911 2.22071044320574 0.206281929913510 0.212342926577663 0.205350685692815 0.210625502883404 0.205117835097322 0.207795853453203 0.211051687677718 0.217806204405921 0.222361047037205 0.225400710147803 0.205370714448764 0.206663906623998 0.208062859746486 0.204709832312605 0.212098605928357 0.206513277524240 0.220209576988260 0.211249548989382 0.208024568121888 5 5 + 22884411 22884965 22884749.364 22882336 22885222 + gene protein_coding_gene TRUE TRUE AT5G56460.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G01020.1); similar to Protein kinase [Medicago truncatula] (GB:ABE87464.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.164705454196236 1.59541013285094 0.140028678886167 1 1.19616530033650 4.95497720131865 0.164705454196236 0.107428014801545 AT5G59900_at 2.00468071864942 2.28850881243328 2.55913448497966 2.50490664246772 2.49987028825139 2.42626922109054 2.23553464692731 2.33389041493585 2.30147459455993 2.07950582291877 2.64036906793377 3.23206480106034 2.25762634250713 2.8905649110125 2.88867780175045 2.61256190419044 2.90043495298362 2.18758448682177 2.21735878511649 0.189985512528706 0.189398953463117 0.196316440781645 0.191314987110213 0.187828810789488 0.200225117799443 0.188936859562801 0.200125033790621 0.194895671400345 0.197787724080491 0.197368571050204 0.193216494611110 0.199232975887847 0.191709488802557 0.194772165098004 0.189088434732927 0.207906224060540 0.196673796041697 0.188889471428806 5 5 - 24141457 24141762 24141596.182 24141209 24143932 - gene protein_coding_gene TRUE TRUE AT5G59900.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G55840.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB44054.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); similar to Os01g0153200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042052.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.137317893235180 1.59508224101762 0.140102035142938 1 1.19574336584333 4.80694037091568 0.137317893235180 0.0543375165102062 AT5G06190_at 2.84462705005757 2.90562695273203 4.12099461640455 4.31379510169501 3.90885300333259 3.85650214541688 3.31249372619283 3.52745248027424 3.84637970472626 3.32598867943704 4.6182013758412 4.26482824964875 4.36103270165793 4.78901339057344 4.23227417264604 4.36002024106468 4.41239699713684 3.98341879484762 3.70188979327519 0.199273854538397 0.198316331225394 0.196704475203647 0.204028256951453 0.192237191678127 0.197206500030895 0.192973543353037 0.201662999709443 0.200936221850690 0.196353825704082 0.202603815237648 0.192237191678127 0.200116375362788 0.198864747715966 0.196296932218252 0.192237191678127 0.212957946412132 0.192734774575358 0.193414401157846 5 5 - 1876199 1876369 1876280.364 1876035 1876638 - gene protein_coding_gene TRUE TRUE AT5G06190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58540.1) 0.136032125093344 1.59081348031864 0.141060140160470 1 1.19025487087328 7.59999361763316 0.136032125093344 0.0518704886506115 AT5G11370_at 1.09678979200286 1.34835793557119 1.21743792966470 1.35127660807640 1.16900978419102 1.61879340376479 0.765025312099016 1.54911779419904 1.38384101296805 1.97151245855084 0.974114830222565 1.39712376987657 1.40312257265115 1.47363216491092 0.59479704003814 1.54321892156560 1.49650632911509 1.86859818416801 1.78053059469523 0.217175438439907 0.217175438439907 0.222801491604170 0.218973317840672 0.226026855642544 0.223713932844389 0.218912339161880 0.217175438439907 0.236124857328663 0.23432334753381 0.224579480466523 0.218943238466897 0.237329296762617 0.223960309307556 0.225411237615884 0.220792137167595 0.224558664200861 0.21876889274484 0.219375501102988 5 0|5 /|+ 3628608 3629674 3628992.444 3627850 3629718 + gene protein_coding_gene TRUE TRUE AT5G11370.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56410.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE92019.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.203996824566235 -1.58979002323727 0.141290706403217 1 1.18894024542799 2.79240136093273 -0.203996824566235 0.164019458224083 AT5G59105_at 0.58889254354718 0.759073950540659 1.19384271197437 1.12539654912160 1.10953104947276 0.993096008777265 0.937506920161803 0.92188326725567 1.00148413743141 0.96343569509415 1.02477508474437 1.79803103675805 1.10210500551062 1.23366963034798 1.04904853082282 0.973698660813993 1.18841533145183 1.07211702997256 1.28802444877447 0.211155858252570 0.204053255611006 0.209620723984330 0.204053255611006 0.204053255611006 0.208217321454392 0.211336290653082 0.205237856227917 0.211982996952402 0.208823131077732 0.204053255611006 0.217040609930440 0.210353073508582 0.211007900608145 0.204053255611006 0.214911603971145 0.214875584554549 0.21257281783772 0.220083059057492 5 5|0 -|/ 23879805 23880208 23879978 23879685 23880279 - gene protein_coding_gene TRUE TRUE AT5G59105.1 Encodes a defensin-like (DEFL) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15757.1); contains domain Scorpion toxin-like (SSF57095) 0.131370945533871 1.58935004140317 0.141389928219694 1 1.18837524214971 2.08592652472447 0.131370945533871 0.0376956619777611 AT5G55140_at 5.68778068031504 6.34052839589197 7.03290424231502 6.98129848337794 7.08143463777707 7.2199182167544 6.18931900445281 6.69818764283217 5.31585053795686 5.55429962017133 6.62864144058199 6.1058441624499 6.4544184926208 6.66885704005762 6.6954465636564 6.59881312759524 6.87066014655197 5.61133573513842 5.91115653718142 0.215974230083618 0.202453446360480 0.196259109261260 0.205123535066631 0.193237764996293 0.195240725173663 0.193237764996293 0.199617649132765 0.201296625816233 0.197574924309452 0.200415036985108 0.201511886130481 0.195089623402349 0.194594017683975 0.205457154568847 0.196126210068567 0.204144269000035 0.19878289620664 0.197772450069627 5 5 + 22398598 22398987 22398774.455 22398222 22399254 + gene protein_coding_gene TRUE TRUE AT5G55140.1 ribosomal protein L30 family protein similar to ribosomal protein L30p-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61538.1); similar to Os06g0339800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057562.1); similar to Os08g0110100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060816.1); contains InterPro domain Ribosomal protein L30; (InterPro:IPR000517); contains InterPro domain Ribosomal protein L30, bacterial; (InterPro:IPR005996) -0.189951620844073 -1.58857540348862 0.141564768527536 1 1.18738071085976 12.6779319064736 -0.189951620844073 0.145496445977556 AT5G10620_at 2.45900031557692 2.44408380527293 2.36535252642808 2.17660132887075 2.59901635093864 2.601615618456 2.83066627607073 2.60321862649744 2.48578042792970 3.18289163471201 4.35147416086190 5.19054709130155 3.50762234860906 3.89605507273506 5.49765301291665 4.07543476658227 3.60793623464927 4.06157284508125 3.17393616813633 0.246929868128132 0.248269657767796 0.262361175633059 0.259634183640506 0.256860231413909 0.257630649805681 0.249674673967857 0.255096282903300 0.252185866507963 0.251318247727842 0.252487521473099 0.255835487485398 0.246929868128132 0.254144062391535 0.260854289426933 0.257484515420948 0.259942419931562 0.249654389839484 0.254442293200081 5 5|0 -|/ 3355589 3356589 3355945.714 3355321 3356616 - gene protein_coding_gene TRUE TRUE AT5G10620.1 Identical to UPF0247 protein At5g10620 [Arabidopsis Thaliana] (GB:Q9LXB4); similar to OSJNBa0035M09.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE02132.2); similar to conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] (GB:CAJ73530.1); similar to Os04g0606900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053804.1); contains InterPro domain Protein of unknown function DUF163; (InterPro:IPR003742) 0.135575462968424 1.58824470404935 0.141639467260279 1 1.18695622301361 6.120480865273 0.135575462968424 0.0512162013294777 AT5G44200_at 7.46973656861123 7.11463288601933 7.68437280283206 7.63209356071744 8.30824410351773 7.99856697177384 7.03395753562631 7.02334787593415 7.29687635191573 7.33497112313111 8.27242520965082 8.2406038483514 8.21367102836983 8.29507936786494 8.14134041838006 8.20567639411165 7.98064740323992 8.1875232777236 7.29145051267715 0.16998432710633 0.163506009973167 0.171992482633393 0.176438454841024 0.165705050239609 0.168497111703812 0.172201592373561 0.172205280696225 0.162448939123156 0.165856799638683 0.164996946954368 0.167005504687438 0.159309042214411 0.170289577612037 0.167463268627494 0.167196818304217 0.164630560540208 0.165297603405945 0.179961229160477 5 0|5 /|- 17819326 17820505 17820009.167 17819041 17821357 - gene protein_coding_gene TRUE TRUE AT5G44200.1|AT5G44200.2 CBP20 (CAP-BINDING PROTEIN 20); RNA binding|CBP20 (CAP-BINDING PROTEIN 20) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed. similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G37720.1); similar to cap-binding protein [Mirabilis jalapa] (GB:AAT07459.1); similar to Os02g0612300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047412.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.149330679830034 -1.58821218932323 0.141646813592890 1 1.18691448968713 15.2830624703138 -0.149330679830034 0.0820586157770869 AT5G41660_at 1.1259592432793 1.46808292237870 1.25498021723311 1.61097889482975 0.949215809454994 1.7136403369233 1.4761802483074 1.36111530594043 2.12210169692463 1.52667458122437 1.59347469355250 1.50245081072359 1.43643174139368 1.34672276080385 1.47383242674141 1.33510604687691 1.72219495346378 1.82195273782629 1.57909144630035 0.211827220750499 0.213330414794076 0.216707466965706 0.210886012239337 0.224185798674847 0.219373828406411 0.221830221837049 0.210087815647009 0.218619942995694 0.220773750329125 0.210087815647009 0.214830744002872 0.214090374124945 0.224552565408534 0.217749807741546 0.215566711088978 0.212612061445752 0.211776236253293 0.213754691876010 5 5 + 16674371 16674764 16674579.455 16674244 16674876 + gene protein_coding_gene TRUE TRUE AT5G41660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44430.1) -0.199732694208296 -1.58795348555599 0.141705276715117 1 1.18658245574723 3.00584079541297 -0.199732694208296 0.158736362588398 AT5G14900_at 0.430186875743339 0.822681092438633 0.37355011558704 0.824359201771799 0.14897063679889 0.121533854689689 0.191801086878828 0.243206052319525 0.00116524545711914 0.36753326180901 -0.498802643665585 -0.104419346336978 0.3554840709907 0.462668528996192 0.357517461307911 -0.0884321271990069 0.567555745423731 -0.201512108215981 0.472371607279023 0.210954713071693 0.206892163423240 0.211017496790034 0.205439976413165 0.210305650766101 0.208121335906179 0.21905243087694 0.209952042165098 0.227741351145298 0.211417836267872 0.229284631240638 0.211237746416208 0.20983431495849 0.205439976413165 0.212288356796025 0.206920672053326 0.205439976413165 0.223428495775774 0.218886996546236 5 5 - 4822752 4823233 4822967.273 4822679 4823584 - gene protein_coding_gene TRUE TRUE AT5G14900.1 helicase associated (HA2) domain-containing protein similar to RNA helicase, putative [Arabidopsis thaliana] (TAIR:AT3G62310.1); similar to Helicase, C-terminal [Medicago truncatula] (GB:ABE87664.1); contains InterPro domain Helicase-associated region; (InterPro:IPR007502); contains InterPro domain Protein of unknown function DUF1605; (InterPro:IPR011709) -0.161727372636010 -1.58751611748219 0.141804163549776 1 1.18602118631833 0.587843190783971 -0.161727372636010 0.103930209741575 AT5G03650_at 9.29768888207537 9.13401934829717 9.84038655683447 9.69506377901117 10.1191754104037 9.53190232124895 10.0357248254157 9.71206906690112 9.49305327791928 9.94745277530744 10.3603291584712 10.5914058906130 10.6064099896302 10.5504958341859 10.2353313741354 10.7749846168233 10.5575684308901 10.5207071326078 9.88244880165016 0.106788539534233 0.110502297437147 0.105250009515107 0.112301475881103 0.105531091092066 0.122227663045112 0.100904970791194 0.106853082957588 0.120920295580332 0.105962626349358 0.107346877211170 0.100921460104141 0.103858804039238 0.108012299987312 0.106118072852024 0.100904970791194 0.101086044662234 0.103399312199142 0.105505624497023 5 5 + 936640 937415 937000.182 931937 937640 + gene protein_coding_gene TRUE TRUE AT5G03650.1 SBE2.2 (STARCH BRANCHING ENZYME 2.2) Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. similar to SBE2.1 (STARCH BRANCHING ENZYME 2.1), 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana] (TAIR:AT2G36390.1); similar to starch branching enzyme I [Pisum sativum] (GB:CAA56319.1); similar to starch branching enzyme II [Solanum tuberosum] (GB:CAB40747.1); similar to starch branching enzyme class II (GB:AAB03100.1); contains InterPro domain Alpha amylase, catalytic subdomain; (InterPro:IPR006589); contains InterPro domain Alpha amylase, catalytic region; (InterPro:IPR006047); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193) -0.173331009180085 -1.58705492872826 0.141908501888512 1 1.18542944561476 19.8202399429627 -0.173331009180085 0.122067852854809 AT5G24450_at 8.2303314802044 8.31632680636298 9.30385861621756 9.20394301451992 9.71892099918196 9.34347785746385 7.99253250192039 7.85911848820795 7.63111285551027 8.2438487721326 8.67251609041195 8.6086329770481 8.78726996968218 8.71441683566537 8.20053082988425 8.9225858724368 8.83236255201114 8.66448564288699 8.14800811343308 0.148873898292195 0.153272556983536 0.149602216347773 0.149315263530550 0.153981482046139 0.148685187223602 0.154362593578367 0.149705065138419 0.175078843808672 0.149249316988387 0.153747323394361 0.148885781952840 0.156453183800197 0.151836915552072 0.158156640854324 0.153716585608360 0.149779387212389 0.152138392937474 0.150671659457424 5 5 + 8352049 8353086 8352536.364 8348247 8353306 + gene protein_coding_gene TRUE TRUE AT5G24450.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49410.1); similar to Os01g0528100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043232.1); similar to transcription factor-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73508.1); contains domain FAMILY NOT NAMED (PTHR13230); contains domain SUBFAMILY NOT NAMED (PTHR13230:SF1) 0.144422190767373 1.58627915443005 0.142084163741501 1 1.18443429339183 17.0875670588159 0.144422190767373 0.0726283797974678 AT5G59950_at 9.35205817687343 9.45060867826618 9.92242457631292 9.98536178885362 10.2368497109816 10.1531215104637 8.87087922009567 9.1298835879989 8.54937438661891 8.79002596536902 9.77773475466899 9.67452314839188 9.70005231686798 9.55031203909506 9.49239189076757 9.44729424768694 8.97399241980823 9.60946328384872 8.67176403534501 0.125653189723669 0.123383474150029 0.127199284503767 0.125676625200751 0.126904115599670 0.133576448625317 0.134081450226416 0.127073373160348 0.146055369354264 0.126243220942977 0.126536078199499 0.123383474150029 0.123383474150029 0.133263037181792 0.123383474150029 0.125046865278854 0.143680465379390 0.129026982895232 0.13042987331877 5 5|0 +|/ 24157847 24158645 24158274.1 24157323 24159084 + gene protein_coding_gene TRUE TRUE AT5G59950.1|AT5G59950.2|AT5G59950.3 RNA and export factor-binding protein, putative similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G02530.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G02530.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.135362070634244 1.58552528890722 0.142255047917563 1 1.18346751716143 18.7369527271072 0.135362070634244 0.0512682928309623 AT5G04660_at 3.07911808902531 3.31602300191136 3.39755906936215 3.60927047425761 3.00173063464408 3.83478431371097 3.69527052359567 4.15866034823368 3.57789468503859 4.00372154922958 4.79904808222455 6.02666000353924 4.5730362498255 4.65070761812957 5.34923713879686 5.46486520991354 4.44426110925647 4.89159588258478 4.0310588117104 0.185151420020391 0.198434356085156 0.19453734389845 0.188084853566973 0.192289379957245 0.188344196288228 0.185151420020391 0.190752950201136 0.192829860473328 0.19007143459839 0.194389121439995 0.195227758359495 0.185346127691656 0.190353678403656 0.190181174457632 0.193713332220166 0.197125970096098 0.188703361126658 0.192653604693304 5 5 + 1337017 1337474 1337291.818 1335996 1337671 + gene protein_coding_gene TRUE TRUE AT5G04660.1 CYP77A4 (cytochrome P450, family 77, subfamily A, polypeptide 4); oxygen binding encodes a protein with cytochrome P450 domain similar to CYP77A7 (cytochrome P450, family 77, subfamily A, polypeptide 7, unfertilized embryo sac 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10560.1); similar to CYP77A6 (cytochrome P450, family 77, subfamily A, polypeptide 6), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10570.1); similar to CYP77A9 (cytochrome P450, family 77, subfamily A, polypeptide 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G04630.1); similar to Cytochrome P450 77A3 (GB:O48928); similar to Cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) (GB:P37124); similar to Cytochrome P450 77A1 (CYPLXXVIIA1) (P-450EG6) (GB:P37123); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.211058430703756 -1.58525521827724 0.142316310754382 1 1.18312123695097 7.95946110373094 -0.211058430703756 0.173888011080997 AT5G48270_at 1.51398532835468 1.47185806246527 1.52759521529640 1.81008356503607 1.10926266209946 1.55189817160651 1.40140317978728 1.15140198736774 2.26999572921613 1.67357122300323 1.37522077211588 1.81474822674402 1.56402831741976 2.09564902487213 1.67016369068487 1.56334990636052 1.53833876568477 1.49618631055920 1.59307509940663 0.187809980867996 0.18159521422684 0.194615567390133 0.189246664709658 0.184546938898453 0.186900821605182 0.187978075711891 0.18159521422684 0.181982819260369 0.18159521422684 0.183284596161254 0.184943501206869 0.186578263211876 0.18159521422684 0.182544850720208 0.185034867306495 0.190456966136294 0.192330074703576 0.193221033124289 5 5 - 19581984 19582533 19582181.727 19581648 19583083 - gene protein_coding_gene TRUE TRUE AT5G48270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04220.1); similar to Protein of unknown function DUF868, plant [Medicago truncatula] (GB:ABE92686.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) -0.159649044089145 -1.58509180705163 0.142353390232216 1 1.18291173041883 3.18481501017525 -0.159649044089145 0.100907514827855 AT5G22620_at 9.4124644807786 9.16546619724614 9.9473567278068 9.7028846677455 10.0558454856641 9.78744598520453 10.0622425943968 9.8521811385728 9.6304635354720 9.77382155629692 10.5366875771991 10.4964676464843 10.3359676361295 10.4915584993957 10.5212614786498 10.9784309093917 10.5847500031718 10.5368637734380 9.90846488647845 0.0991033245170368 0.0970124359092318 0.103266749152773 0.101740299853483 0.0993897626053512 0.101860471054939 0.0966797958074577 0.0975859218749008 0.11878921832514 0.107910013483473 0.0966797958074577 0.0979469161736918 0.100436876705680 0.0994219103391309 0.0983489766957625 0.0985746525002202 0.105890428232481 0.102359629267572 0.10092838144548 5 5 - 7517745 7518442 7517980.909 7517594 7520256 - gene protein_coding_gene TRUE TRUE AT5G22620.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT3G50520.1); similar to phosphoglycerate mutase family, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92756.1); similar to Os11g0150100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065757.1); contains InterPro domain Phosphoglycerate/bisphosphoglycerate mutase; (InterPro:IPR001345); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078) -0.150086605583156 -1.58403166070787 0.142594153392095 1 1.18155284237577 19.9138184596260 -0.150086605583156 0.0842367191531704 AT5G60360_at 12.6873398752856 12.7988214842259 13.4803290291083 13.6195456842043 13.5443647235888 13.3143843110629 13.0364347852686 12.9903177658447 12.8492999465856 12.8872770764285 13.3046223268928 12.9611976127126 13.5851680021202 13.4618102831836 12.9427031138952 13.3646419783902 13.4610779945513 13.5618549528264 12.7371526265941 0.0798644162064911 0.0750467502415703 0.078540316684948 0.0793196398745947 0.0764064942847291 0.0787340264379556 0.0760554931588371 0.0766211123477039 0.0781080996439938 0.0755627951092614 0.074942634335889 0.0757391891631176 0.0760893860935396 0.074942634335889 0.0773939036822481 0.074942634335889 0.0784799099052494 0.0769280292824996 0.0754327209054235 5 5|0 +|/ 24298567 24299343 24298878 24297123 24299623 + gene protein_coding_gene TRUE TRUE AT5G60360.1|AT5G60360.2|AT5G60360.3 AALP (ARABIDOPSIS ALEURAIN-LIKE PROTEASE); cysteine-type peptidase|AALP (ARABIDOPSIS ALEURAIN-LIKE PROTEASE) Encodes AALP protein. Identical to Thiol protease aleurain precursor (EC 3.4.22.16) (AtALEU) (Senescence- associated gene product 2) (ALEU) [Arabidopsis Thaliana] (GB:Q8H166;GB:Q9LL83;GB:Q9S9A9); similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G45310.1); similar to cysteine protease [Brassica napus] (GB:ABA71355.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60582.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668)|Identical to Thiol protease aleurain precursor (EC 3.4.22.16) (AtALEU) (Senescence- associated gene product 2) (ALEU) [Arabidopsis Thaliana] (GB:Q8H166;GB:Q9LL83;GB:Q9S9A9); similar to cysteine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G45310.2); similar to cysteine protease [Brassica napus] (GB:ABA71355.1); similar to senescence-associated cysteine protease [Brassica oleracea] (GB:AAL60582.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) 0.135085349670085 1.58344013784689 0.142728645987282 1 1.18079486328627 26.2614227487941 0.135085349670085 0.0509930742811516 AT5G25940_at 8.16023796547654 8.45147162159401 9.28958681463551 9.1535050214346 9.37811298385026 8.840027607026 8.19561499332905 8.10179568438618 7.35580654474405 7.8465018880819 9.20863758674184 9.06541308638879 8.90056149671264 8.31419151304221 8.66986349531595 8.86055084255635 8.47444025027849 8.8058177971173 7.91322017353229 0.172058097138026 0.171661702987697 0.175340086714501 0.182568994701515 0.173991182196658 0.182750383630900 0.171896957694898 0.175286615631328 0.206415990900412 0.183476082039867 0.177426853817695 0.174351383822185 0.173591134366387 0.192301816949134 0.175895588273333 0.175045894682621 0.199323716602146 0.175578986678673 0.188670044265377 5 5|0 -|/ 9054287 9055105 9054748.333 9054125 9055254 - gene protein_coding_gene TRUE TRUE AT5G25940.1 early nodulin-related similar to Early nodulin 93 (N-93) (GB:Q02921); contains InterPro domain Early nodulin 93 ENOD93 protein; (InterPro:IPR005050) 0.164867420187785 1.58332058777291 0.142755841235601 1 1.18064169156447 16.9425994417858 0.164867420187785 0.109678058382317 AT5G10730_at 5.8667199970526 6.41930549469406 7.33562637265617 7.3034211621467 6.70588523089274 6.60433340209598 6.67215368200262 6.83153522016634 5.13927167324704 6.06361749148725 6.46520962616607 6.88758003721106 6.95782341459086 6.76313296972273 6.81883879764835 6.90259927956459 7.02530903853342 7.04091822531592 5.66910372503132 0.201002546997018 0.197669123472923 0.19859593218442 0.201708320996005 0.199286502169019 0.202170221629982 0.200061578381402 0.200436855614343 0.230695974508386 0.205804760363265 0.196819189370120 0.19788388389263 0.200293693198062 0.204043612553549 0.208139699369322 0.196015241812513 0.211397421959982 0.196015241812513 0.204042376240001 5 5|0 -|/ 3390862 3392134 3391246.7 3390615 3393179 - gene protein_coding_gene TRUE TRUE AT5G10730.1 catalytic/ coenzyme binding similar to dehydrogenase-related [Arabidopsis thaliana] (TAIR:AT5G15910.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96868.1); similar to Os02g0556100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047127.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.159552951906509 -1.58228287981399 0.142992090460671 1 1.17931242786772 12.9582095969714 -0.159552951906509 0.101218954845818 AT5G27470_at 9.1896169305057 9.17429946270417 9.71955725845167 9.78500447703615 9.98829575452642 9.77008923440953 9.36410170294672 9.21598925749877 8.8516466752748 8.873068732796 9.72658488885881 9.67870210403276 9.43646769608612 9.33876277124361 9.77712367057681 9.41282961668592 9.21440841001203 9.31194434769528 8.88465819704508 0.111219020936343 0.110960822919638 0.110747309135288 0.108398441309861 0.114044656986476 0.110160085155235 0.115255484405710 0.117511966859737 0.121187426725203 0.120246173578232 0.114330114814729 0.114025367033287 0.108120477242300 0.116934657587056 0.116786326054055 0.113197144124056 0.129280071646795 0.118954580381852 0.115616362975343 5 5 + 9696500 9697106 9696855.636 9695011 9697392 + gene protein_coding_gene TRUE TRUE AT5G27470.1 seryl-tRNA synthetase / serine--tRNA ligase Identical to Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) [Arabidopsis Thaliana] (GB:Q39230); similar to AtSRS (OVULE ABORTION 7), serine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G11870.1); similar to Seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) (GB:O81983); similar to Os03g0198400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049278.1); contains InterPro domain tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Aminoacyl-transfer RNA synthetase, class II; (InterPro:IPR006195); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978); contains InterPro domain Seryl-tRNA synthetase, class IIa; (InterPro:IPR002317) -0.133606142814008 -1.58187672608944 0.143084650764953 1 1.17879229939357 18.704316329687 -0.133606142814008 0.0470980103227105 AT5G03370_at 4.62190320470447 4.95700146255878 5.82043382693300 5.84703110393028 5.87105491630064 5.32942781141077 6.04168774850025 5.93244873830721 4.43477981473024 4.58324679705267 5.7474192201369 5.70476777821706 5.33446619070973 5.44430079185493 6.050466909486 5.66010421548933 5.67956714860328 5.8140315634406 4.22291035540064 0.235041321387374 0.222197595617765 0.219371421488613 0.223223702845351 0.229560657923635 0.236737464768357 0.218420717337360 0.23230755020204 0.22150290024825 0.222705970375717 0.221327214968263 0.218420717337360 0.225427988686725 0.223408373222009 0.232058634474087 0.222394228932598 0.243045809737594 0.222375735131527 0.224218977176481 5 5|0 -|/ 825828 826958 826380.7 825572 827042 - gene protein_coding_gene TRUE TRUE AT5G03370.1 acylphosphatase family similar to acylphosphatase [Nitrobacter sp. Nb-311A] (GB:ZP_01047119.1); contains InterPro domain Acylphosphatase; (InterPro:IPR001792) -0.166091131643025 -1.58141112512079 0.143190823564980 1 1.17819613767548 10.5991416680657 -0.166091131643025 0.111923876731135 AT5G09490_at 1.81789392244172 1.43069061588375 2.07122240403455 1.69298323926718 1.49910010108961 1.59816735161421 1.93245614205062 1.3519568968506 1.99339016883636 2.28567588908382 1.69670323726396 1.77380481732241 1.69475035532863 1.89878219976488 2.02245509257242 1.74283708256509 1.50627459250342 1.76703851370309 1.54487296557424 0.188195848705614 0.186857422115794 0.19556765872984 0.189289585616885 0.190392343442115 0.190662249029939 0.188411561559572 0.186418852195967 0.190775872167091 0.193527690498510 0.190998792309181 0.193925870326717 0.190899892032551 0.184521418672272 0.197995556557395 0.188224893901019 0.188911902851644 0.195584752501183 0.189506617005807 5 5|0 -|/ 2952388 2953055 2952661.2 2952219 2953246 - gene protein_coding_gene TRUE TRUE AT5G09490.1 40S ribosomal protein S15 (RPS15B) Identical to 40S ribosomal protein S15-2 (RPS15B) [Arabidopsis Thaliana] (GB:Q9FY66); similar to 40S ribosomal protein S15 (RPS15D) [Arabidopsis thaliana] (TAIR:AT5G09510.1); similar to 40S ribosomal protein S15 (GB:P31674); similar to Os03g0798600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051572.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Ribosomal protein S15, eukaryotic and archaeal form; (InterPro:IPR005713) -0.183141658625487 -1.57399799093494 0.144890617073129 1 1.16871812369923 3.52638070625876 -0.183141658625487 0.138420470566989 AT5G06600_at 8.78808012888987 8.62466887509219 9.31534396164045 9.3328416539685 9.0933898854429 8.97017538857625 8.2434481165979 8.67716544822642 8.46028468989115 8.28924751413671 9.58014155520464 9.63118963348604 9.65692893007825 9.61175006192003 9.57414628429324 9.5799194165276 9.33166695103862 9.12466741619682 7.93155022878523 0.127221319093763 0.128259753387009 0.124703931616614 0.125521422037169 0.128454217970594 0.127705663283501 0.135614417031468 0.128115205953378 0.143782786181171 0.133602232081776 0.123282161427186 0.124223010329829 0.124098579224309 0.123436143881882 0.128117705663867 0.122137319070103 0.130920036892228 0.123268639899308 0.149301335886891 5 5|0 -|/ 2019564 2020921 2019977.333 2019108 2027946 - gene protein_coding_gene TRUE TRUE AT5G06600.1|AT5G06600.2 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin-specific protease, putative [Arabidopsis thaliana] (TAIR:AT3G11910.1); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94399.1); similar to ubiquitin-specific protease 12, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98280.2); similar to putative ubiquitin-specific protease [Oryza sativa (japonica cultivar-group)] (GB:BAC83609.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Small acid-soluble spore protein, alpha/beta type; (InterPro:IPR001448); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.148299449835913 1.57176129518865 0.145406946018726 1 1.16586355108804 17.7498035616531 0.148299449835913 0.0830485604935951 AT5G26250_at 1.86419267547417 1.92304466969450 2.38497649733999 1.63196325441058 1.85896208475627 2.03690316628497 2.16368955736888 1.8835512815175 2.04184147793349 2.12600631045714 2.16138716196247 2.04176782231850 2.04878400689361 2.02841609825552 1.92988630627425 2.09263704380568 2.47240306855905 2.01137408911599 2.24481269760063 0.184582463591917 0.182021876779422 0.184562889859181 0.178130635692930 0.18010951262419 0.179101208631356 0.181202530370198 0.178130635692930 0.183826485424378 0.191195147019205 0.186086328752669 0.186434246805215 0.178130635692930 0.184988874847508 0.182600883774836 0.179797867417514 0.186923834416105 0.181256225325792 0.182587837673856 5 5|0 +|/ 9198027 9198534 9198247.9 9196761 9198804 + gene protein_coding_gene TRUE TRUE AT5G26250.1 sugar transporter, putative Identical to Sugar transport protein 8 (Hexose transporter 8) (STP8) [Arabidopsis Thaliana] (GB:Q9SBA7;GB:O81492); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G05960.1); similar to monosaccharide transporter [Populus tremula x Populus tremuloides] (GB:CAG27608.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.185806839181113 -1.57030847261083 0.14574318613446 1 1.16401067419446 4.08635312084513 -0.185806839181113 0.142770934947388 AT5G33200_at 1.15126687203318 1.54530148439573 1.68596357867942 1.83308677987539 1.36168639401071 1.66827911225375 1.25659288436177 1.73560335324125 1.96257421338690 2.03643756208236 1.72191997009379 1.45563447356147 1.70320136793839 1.06459605721245 1.49511061706364 1.39018302390990 1.96006617385273 1.60533034707913 1.62002788181880 0.175405058553845 0.178045022418855 0.177269400990113 0.176820658087418 0.177586891396124 0.175302415053657 0.181206638985608 0.177848292538704 0.179812052709159 0.174400040824740 0.183020344088741 0.177703994799730 0.171972740645839 0.177019843400650 0.176928751790746 0.175362881956061 0.174933057685110 0.179502218575226 0.177696153125648 5 5|0 -|/ 12469013 12469675 12469311.6 12468882 12471971 - gene protein_coding_gene TRUE TRUE AT5G33200.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G42400.1); similar to hypothetical protein 31.t00031 [Brassica oleracea] (GB:ABD65118.1); contains InterPro domain Protein of unknown function DUF223, Arabidopsis thaliana; (InterPro:IPR003871); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.171509523210992 -1.56828739298072 0.146212077061417 1 1.16143474434854 3.24098179382388 -0.171509523210992 0.122412004075302 AT5G16580_at 1.47857601679443 1.58202020272618 1.90779389818751 2.45430238347226 1.79869405027534 1.78816663631382 1.79733976013928 1.88140644555919 1.70230061141144 1.62787800322018 1.97555845945453 1.81271123081061 1.68051618616277 2.10711942825216 1.62440350279745 1.96607868049367 2.01613458259803 2.18828796101896 1.56131640132488 0.218790956711424 0.207679193755843 0.208504708292880 0.224257439379943 0.215286601142881 0.211325847374131 0.217337574839371 0.211990421593719 0.216294419235788 0.212596852083308 0.211501939452147 0.222994285799793 0.216624970350858 0.210527817394758 0.212787380341537 0.207679193755843 0.211197607742648 0.216700988360501 0.211503942963827 5 5|0 -|/ 5426012 5426907 5426546.143 5425892 5427475 - gene protein_coding_gene TRUE TRUE AT5G16580.1 glycosyl hydrolase family 1 protein similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT4G22100.1); similar to Glycoside hydrolase, family 1 [Medicago truncatula] (GB:ABE85054.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.155841828949313 1.56794588324795 0.146291437861180 1 1.16099967286634 3.61196222048385 0.155841828949313 0.097365398121688 AT5G25070_at 5.95129669610581 6.28815437286242 6.8384129505186 6.90003752704216 7.49010620436213 6.97247544253665 5.41684768667572 5.39215680586104 5.11553012442632 5.6380620685927 6.59916229585779 6.54728716847868 6.60783743446187 6.31134982651912 6.34826720194409 6.84525705686276 6.64629380549286 6.59368334467448 5.57768246420585 0.188189201363336 0.183640035202849 0.184116125222317 0.191916671722942 0.189486664660801 0.194438903279901 0.182362495445118 0.190819304895925 0.191907412637935 0.177905304898642 0.182491504536152 0.180031630438745 0.178993118630545 0.177905304898642 0.187071529245340 0.179638875940142 0.179575388577252 0.179747856393204 0.188051543417078 5 5 - 8641264 8641839 8641497.545 8641001 8643494 - gene protein_coding_gene TRUE TRUE AT5G25070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G16730.1); similar to Os08g0516000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062237.1); similar to hypothetical protein, conserved [Leishmania major] (GB:CAJ07774.1) 0.161889136187275 1.56774680113339 0.146337718427752 1 1.16074607502659 12.4092612036763 0.161889136187275 0.10749215296042 AT5G40090_at 2.02308868750269 2.20127456978957 2.42545350449708 1.95807248759823 1.87129222223710 1.87961600605387 1.59254589246091 2.09481993791663 2.37009651369222 2.14542817431253 2.33238089121139 2.07705128163130 2.22572425909786 2.07116623886395 2.10310551392242 1.79450714801851 2.19152165280588 1.99851495090534 1.90198700975089 0.217227286748207 0.216399570683193 0.223827079358745 0.215437726972646 0.220613599500571 0.214474968301421 0.221240946910363 0.214592625439967 0.213299282579646 0.214755135929988 0.223920185412704 0.213090024609402 0.216259068148654 0.222745279693429 0.214445125813847 0.211379920982140 0.221952899673910 0.218537563876884 0.211379920982140 5 5 - 16059444 16059868 16059682 16059147 16060680 - gene protein_coding_gene TRUE TRUE AT5G40090.1 disease resistance protein-related similar to disease resistance protein-related [Arabidopsis thaliana] (TAIR:AT1G17610.1); similar to TIR-NBS-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81434.1); similar to nematode resistance protein [Solanum tuberosum] (GB:AAP44390.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain AAA ATPase; (InterPro:IPR003593) -0.171571354512254 -1.56723272820871 0.146457284176460 1 1.16009131876068 4.12497894249482 -0.171571354512254 0.122679002356539 AT5G26070_at 1.54018600333684 1.75983499293529 1.54532822460916 1.97210426781743 1.03726788533125 1.86463864609961 1.44106844349831 2.1599984620452 2.34024403919135 2.26498279677847 2.08420540349143 2.33257280155857 1.98684000912731 2.30977766063654 2.21696075713740 2.39037757408258 2.12674759320015 1.96790715400643 2.02494147495511 0.180776446274492 0.179082437937213 0.180752276680907 0.185165567844417 0.190099478827648 0.182387187691635 0.182946030403616 0.182663767403313 0.185437509316881 0.19298247805966 0.194463754847260 0.185036983714713 0.181347628533247 0.186238292948627 0.186049718775079 0.184919302862418 0.181394140203171 0.19616414754764 0.189374375128110 5 5 + 9106344 9106588 9106486.727 9106344 9106652 + gene protein_coding_gene TRUE TRUE AT5G26070.1 hydroxyproline-rich glycoprotein family protein Encodes a protein with 23.5% proline residues and proline-rich extensin domains, INTERPRO:IPR002965; similar to root nodule extensin (Pisum sativum) gi:15021750/gb:AAK77902; Common family members: At5g19800, At5g57070, At1g72790 (Arabidopsis thaliana) similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT5G26080.1); similar to unknown [Epiphyas postvittana nucleopolyhedrovirus] (GB:NP_203248.1) -0.234659593384587 -1.56422227242237 0.147159191470352 1 1.15625955937851 3.85854322710749 -0.234659593384587 0.207072485647194 AT5G42850_at 8.31235061925658 8.32043619381986 9.30785807391674 9.1386376123801 9.54832493860976 9.18089252381623 8.44993889250697 8.36302457442902 7.52435192914575 7.28875461028188 8.34382268618456 8.65805290768795 8.3077296589996 8.70552578971743 8.07739216906409 8.49641208662798 8.85755427452847 8.3623218672765 7.42212030229231 0.204379401370254 0.193151097742307 0.210797514904883 0.209114074172039 0.195812011301272 0.198724943117877 0.194721683648371 0.204673857554162 0.228568070537194 0.207931673331415 0.201032878044543 0.195368199289065 0.196317314958233 0.198878024777346 0.199033364010084 0.192060480599937 0.204406944809900 0.213717936266108 0.199210972058164 5 5|0 -|/ 17199336 17199759 17199508.2 17198935 17199851 - gene protein_coding_gene TRUE TRUE AT5G42850.1|AT5G42850.2 electron carrier/ protein disulfide oxidoreductase similar to Thioredoxin-related [Medicago truncatula] (GB:ABE89853.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Protein of unknown function DUF953, thioredoxin-like; (InterPro:IPR010357); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.141744133734752 1.56207199341358 0.147662345084258 1 1.15352531988143 16.7716047838840 0.141744133734752 0.0716165393006182 AT5G66070_at 6.61263793684057 6.33015245114483 7.46275781272181 7.41919383442228 7.0433008148958 7.06338321572272 5.07544637525631 5.70765805186806 5.25921849209382 4.6697728849085 6.04608011266387 5.41743226154109 5.61574686113471 6.31455960725305 5.56471969533898 5.72906723412914 6.54948937200801 6.09044820000073 4.58140756000593 0.224562042028532 0.230405387530858 0.226458928083349 0.232431348811805 0.219048379186892 0.232580155252138 0.228608991910507 0.228646374634888 0.237216225274392 0.232017393378886 0.217825117274846 0.219776430910054 0.217825117274846 0.220315564017703 0.222801772057386 0.223073195369259 0.217825117274846 0.232657256107850 0.231425444700619 5 0|5 /|+ 26439467 26440208 26439765.2 26439081 26440466 + gene protein_coding_gene TRUE TRUE AT5G66070.1|AT5G66070.2 zinc finger (C3HC4-type RING finger) family protein|protein binding / zinc ion binding Identical to RING-H2 finger protein ATL5P (ATL5P) [Arabidopsis Thaliana] (GB:Q9FKX5); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G17730.1); similar to Os10g0544600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065202.1); similar to Os06g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058595.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79837.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)|similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G17730.1); similar to Os10g0544600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065202.1); similar to Os06g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058595.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79837.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.169295487962653 1.56182911164384 0.14771927266203 1 1.15321661788737 11.9656875934481 0.169295487962653 0.120119232562557 AT5G45210_at 0.747769585402146 1.20231550604697 1.34126122022116 1.29527575855715 0.774062539428617 0.888037895497317 0.95177572200974 1.32008943726121 1.24425547274032 1.60672615724037 1.43858221080634 0.862025546400249 1.06760272439783 1.63327375743033 1.10437053598625 1.63453038480769 1.64235510430800 1.74210446929804 1.82627732804095 0.20767387523861 0.206097250229172 0.212405725356461 0.218050775397057 0.204217176730548 0.210488714714722 0.20692024905525 0.204217176730548 0.228279077481091 0.210096068482115 0.207954028802428 0.210625018290383 0.208290007399441 0.211355716748292 0.215266554792141 0.204399108447514 0.211775802670649 0.21268909589542 0.206855337278881 5 5 + 18315095 18315520 18315272.273 18312748 18315661 + gene protein_coding_gene TRUE TRUE AT5G45210.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51560.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36140.1); similar to TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81441.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.158469555879453 -1.55834805170587 0.148537290118925 1 1.14879533447492 2.53991941356298 -0.158469555879453 0.103453118909722 AT5G18900_at 7.52680809981436 7.89935040170443 8.38556694420237 8.495850231541 8.14683395893212 8.06121569319787 6.83912001349456 7.43770895052695 6.01521138272569 6.51463328466671 8.07323385763116 8.00086759696694 7.82186213325072 8.18646124804862 7.88885184724239 8.19656340491436 7.0590120106094 7.37364820491012 6.54008436192436 0.193857501527402 0.198802861339936 0.193626511467252 0.201237905891663 0.194799782109629 0.197664036306059 0.198645450862691 0.199129765611067 0.206770725426545 0.207562926065897 0.193882262401619 0.193201126689860 0.194180561460236 0.200238818007344 0.197731846674115 0.190588015280028 0.219703287476736 0.196061601692847 0.192676791665012 5 5 - 6304428 6305258 6304830.545 6304217 6306292 - gene protein_coding_gene TRUE TRUE AT5G18900.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to AT-P4H-2 (A. THALIANA P4H ISOFORM 2), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygenase [Arabidopsis thaliana] (TAIR:AT3G06300.1); similar to prolyl 4-hydroxylase [Dianthus caryophyllus] (GB:AAT84604.1); similar to Os05g0489100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055890.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain Metridin-like ShK toxin; (InterPro:IPR003582); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.171641194101283 1.55757134395050 0.148720349236136 1 1.14780964086266 14.9399095605362 0.171641194101283 0.124381572177488 AT5G02290_at 9.96426253881977 10.1908372545673 10.9237839462275 10.9129147815067 10.8154219212412 10.6380151735657 8.88218509419644 8.96134744916946 9.50502729297032 8.81569240909579 9.6318727268662 9.39727070649808 9.43221262085617 9.58062541140205 9.09030593418154 9.30458821429322 9.28129003690345 9.4952697882322 8.88194664944342 0.093885340903325 0.093128678012966 0.0957330149384393 0.0938878885386254 0.0949146963973205 0.0955884396668302 0.0954136410275644 0.099076416882946 0.0999159762565331 0.0953320033001305 0.0946172343631813 0.093128678012966 0.093731839877879 0.0973059936699018 0.0959228176163406 0.0968785350287893 0.0984132051160234 0.096858242925537 0.097960358222244 5 5 - 470395 471120 470695.455 470180 472782 - gene protein_coding_gene TRUE TRUE AT5G02290.1|AT5G02290.2 NAK; kinase Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl. Identical to Probable serine/threonine-protein kinase NAK (EC 2.7.11.1) (NAK) [Arabidopsis Thaliana] (GB:P43293;GB:Q9LZ96); similar to APK1A (Arabidopsis protein kinase 1A), kinase [Arabidopsis thaliana] (TAIR:AT1G07570.1); similar to protein kinase (GB:AAA18853.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.133031341221530 1.55650072905791 0.148973001563716 1 1.14645143918751 19.3957134601154 0.133031341221530 0.0516834274121013 AT5G58430_at 9.15295926049049 9.31824798029784 9.86840372937883 10.0055104586836 10.1836853970315 10.0425053544454 8.44611675183831 8.69153168066226 9.00352416173066 8.79974392295404 9.71618354036926 9.58667519545754 9.4211701877044 9.54923992987574 9.46845791860492 9.54235969971877 9.25509715077819 9.47800735469504 8.84364013594702 0.108199753595905 0.100964983852308 0.110382879924452 0.100733813837697 0.105180604749853 0.102670231817298 0.101009195580977 0.1086995690882 0.124581167825629 0.105985090206238 0.0996958646381886 0.0996958646381886 0.102346822362763 0.103348533022558 0.103928653304497 0.101051799158629 0.104727018674202 0.101870389498062 0.109659264545516 5 5 - 23638697 23639255 23638900.182 23638409 23640670 - gene protein_coding_gene TRUE TRUE AT5G58430.1 ATEXO70B1 (exocyst subunit EXO70 family protein B1); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70B2 (exocyst subunit EXO70 family protein B2), protein binding [Arabidopsis thaliana] (TAIR:AT1G07000.1); similar to unnamed protein product [Solanum lycopersicum] (GB:CAA78112.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.136541265489324 1.55354505174260 0.149672455238631 1 1.14270470292877 18.6558458827841 0.136541265489324 0.0614962617438304 AT5G46780_at 8.04930098660654 8.1272742693651 9.11866674054108 8.97764300798919 9.66964478063288 9.06751410335436 7.69220630041502 7.31040110910891 7.48161722448055 7.65148069500575 8.4902385194386 8.12623660867993 8.4761734440945 8.62441219042901 7.60903351317269 8.93173031206058 8.45990516791688 8.20519663121175 7.91811979991216 0.191707721529729 0.185131396679293 0.201297673470291 0.195410049580849 0.194320497456521 0.191006722115304 0.194607471264600 0.193157275989319 0.225183490107084 0.186210216233705 0.192421734539159 0.184692629651246 0.188460357483157 0.191929882961589 0.191794777955172 0.183667103922577 0.202512760416879 0.204371567908342 0.188315806101160 5 5 + 18996625 18997135 18996970.909 18996204 18997284 + gene protein_coding_gene TRUE TRUE AT5G46780.1|AT5G46780.2 VQ motif-containing protein similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT2G35230.1); similar to putative hydroxyproline-rich glycoprotein [Oryza sativa] (GB:AAL67588.1); similar to Os10g0577200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065489.1); contains InterPro domain VQ; (InterPro:IPR008889) 0.172600961409697 1.55350487981261 0.149681981563624 1 1.14265380863052 16.5261339313391 0.172600961409697 0.126496221841685 AT5G11900_at 7.82494697743066 7.76102021397638 8.57921455687173 8.3849594327446 8.77007333585464 8.05817657445966 8.0686008423697 7.84772791602822 6.96866758016612 7.00152037083249 7.82477642603945 7.96429222322685 7.68957375299082 7.65575847747323 8.10538103756471 7.69206415252253 7.9009272174221 7.77436170977821 6.58123059545624 0.123238032559385 0.128241330722578 0.132605180626146 0.126821214614676 0.131312826712559 0.137302578045205 0.122434836414157 0.131192598506704 0.148730820479396 0.132064049680029 0.124803328693236 0.129751604588178 0.122434836414157 0.129904714965736 0.123646609143796 0.123588384097448 0.133220975946308 0.133060343445458 0.141905109744504 5 5|0 +|/ 3834242 3835855 3835009.125 3833986 3836279 + gene protein_coding_gene TRUE TRUE AT5G11900.1 eukaryotic translation initiation factor SUI1 family protein similar to Os01g0195500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042291.1); similar to putative density regulated protein drp1 [Oryza sativa (japonica cultivar-group)] (GB:BAD72209.1); contains InterPro domain Density-regulated protein DRP1; (InterPro:IPR005873); contains InterPro domain Translation initiation factor SUI1; (InterPro:IPR001950) -0.177522536785228 -1.55348226720721 0.149687344123774 1 1.14262516079606 15.5000223429397 -0.177522536785228 0.133757209962628 AT5G63400_at 8.47879342888 8.6638055552908 8.97820881499507 9.20575051257561 8.92372743094754 9.07500647805313 7.95856949659656 8.2043484216237 8.28141735343885 7.99201502408653 9.30441449311686 9.7132488229479 8.95400135125495 9.16285274986844 9.55212259304809 8.90837507988879 8.98335197755821 9.14658758550295 7.75564266478972 0.143144472052530 0.138451102658534 0.140231289351674 0.140346615247225 0.138074901554856 0.144477949556267 0.149534466097354 0.144268070254174 0.157088443045491 0.148935663345343 0.139719193740767 0.141348567605920 0.143894145929517 0.141036059312979 0.142707574959495 0.138545942581272 0.145467826464944 0.142361906512198 0.157066977245853 5 5 - 25410524 25411429 25411013.909 25410227 25412133 - gene protein_coding_gene TRUE TRUE AT5G63400.1|AT5G63400.2 ADK1 (ADENYLATE KINASE 1); adenylate kinase encodes a protein similar to adenylate kinase. Identical to Adenylate kinase 1 (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ADK1) [Arabidopsis Thaliana] (GB:O82514;GB:Q9FMW2); similar to adenylate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G50370.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850)|Identical to Adenylate kinase 1 (EC 2.7.4.3) (ATP-AMP transphosphorylase 1) (ADK1) [Arabidopsis Thaliana] (GB:O82514;GB:Q9FMW2); similar to adenylate kinase, putative [Arabidopsis thaliana] (TAIR:AT5G50370.1); similar to Os11g0312400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067759.1); similar to Adenylate kinase [Medicago truncatula] (GB:ABE82022.1); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase, lid region; (InterPro:IPR007862); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) 0.140761873057595 1.55334621955600 0.149719611252438 1 1.14245280773464 17.2986817735803 0.140761873057595 0.071204653389197 AT5G50350_at 4.6902000777203 4.60985162556164 5.80730994803623 5.96441171205766 5.19431938692832 5.68104169722664 3.59384525868939 3.85199222188160 4.21279879957467 4.00365288178226 4.60720458007203 4.94447827796511 5.01554152949459 4.99062061080374 4.58890036975549 4.94921185421868 5.08539174426898 4.49450203056536 4.46026311556663 0.200284991067328 0.196480002389428 0.209113925277147 0.199153522267916 0.201392154342382 0.199241339217344 0.196480002389428 0.199331591146859 0.212771967921447 0.200558521195203 0.198524806286280 0.201027922817642 0.196480002389428 0.200076778506629 0.205261354426698 0.196480002389428 0.196480002389428 0.198364255533611 0.20785251896795 5 5 - 20515925 20516406 20516168.273 20515702 20518906 - gene protein_coding_gene TRUE TRUE AT5G50350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to Os11g0129800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065647.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001078830.1); similar to Os06g0609800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058048.1) 0.155766523383833 1.55116065339703 0.150238807019847 1 1.13968524183238 9.45414797782148 0.155766523383833 0.100114074904111 AT5G20060_at 7.99214978118766 8.084308519448 8.24034378441401 7.90764222966155 8.69230290559325 8.55340132511674 8.02124239075914 7.73929906827299 7.72622916571225 8.10564320803046 9.09915336626226 9.55118194652579 8.7065441812178 8.92813689911942 9.17141312399221 8.83515272792419 8.52602522860874 8.82218761222627 7.8450111951405 0.118200638744869 0.117074321527598 0.120757161328099 0.116212457142114 0.112138830094959 0.114509023106511 0.115584236484258 0.112138830094959 0.127897335713786 0.112138830094959 0.123306076536905 0.118863387763575 0.114344832567946 0.116003237200325 0.116580114858951 0.113788472198564 0.123298552147801 0.118143964198431 0.132348562862775 5 5|0 +|/ 6777393 6779409 6778770 6776169 6779616 + gene protein_coding_gene TRUE TRUE AT5G20060.1|AT5G20060.2|AT5G20060.3 phospholipase/carboxylesterase family protein|carboxylic ester hydrolase similar to phospholipase/carboxylesterase family protein [Arabidopsis thaliana] (TAIR:AT1G52700.1); similar to putative lysophospholipase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAB62566.1); contains InterPro domain Phospholipase/Carboxylesterase; (InterPro:IPR003140) -0.145098564420431 -1.55003998960860 0.150505637606001 1 1.13826705744001 16.5774707049045 -0.145098564420431 0.0807943361071677 AT5G23960_at 0.497579323619775 0.675826879276081 0.235629177286683 0.541589647988763 0.725871381449646 0.640488180367772 0.689566612879908 0.516090336108222 0.441089509909903 0.614441190740368 0.614072523411308 0.639303962506289 0.414609890267273 0.666346837280341 0.585150118336389 0.459070244965962 0.127186837023178 0.440305449076142 0.79061961868087 0.205103845050018 0.207399424866117 0.198681661854423 0.204035767833959 0.20000133357553 0.20460357771046 0.221759267145859 0.203592601036121 0.202738056156466 0.202503050891934 0.213727112606630 0.209421756241918 0.198042832519365 0.20733083852514 0.202572172447277 0.204340831831826 0.205297735505974 0.211469661768620 0.201920337019615 5 5 + 8094401 8095104 8094829.182 8092972 8095131 + gene protein_coding_gene TRUE TRUE AT5G23960.1 terpene synthase/cyclase family protein Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. similar to terpene synthase/cyclase family protein [Arabidopsis thaliana] (TAIR:AT3G14490.1); similar to terpenoid synthetase [Vitis vinifera] (GB:AAS66358.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpene synthase-like; (InterPro:IPR001906) -0.139739717436410 -1.54905421291160 0.150740693543799 1 1.13702007794087 1.11964977868981 -0.139739717436410 0.0698181337090349 AT5G27610_at 2.82674701282981 2.67108746758337 2.83375419297173 2.98514580232887 3.13548290918509 2.97889344034152 2.49383902373192 2.37972771872061 2.70204747401684 2.83378394642627 2.77178544734556 2.86264336897822 3.05728371376055 3.13625326342337 2.96935896219895 3.05477615706203 2.54743768722277 2.85585989667284 2.8996900752497 0.188936995889943 0.195390298996676 0.194110284671638 0.189750846790925 0.192590838372454 0.202257220018722 0.191852893624326 0.194439468794742 0.194192846475642 0.192342991989565 0.197131163760663 0.188936995889943 0.194742935888837 0.188936995889943 0.19080797475711 0.188936995889943 0.192853243305494 0.193568367049706 0.197577000743056 5 5|0 +|/ 9768794 9769599 9769298.9 9764138 9769906 + gene protein_coding_gene TRUE TRUE AT5G27610.1 DNA binding / transcription factor similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G05380.2); similar to Os03g0639200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050734.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77870.1); contains InterPro domain DIRP; (InterPro:IPR010561); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.131908660201813 -1.54877919661872 0.150806327635250 1 1.13667227490148 5.64746735128527 -0.131908660201813 0.0503618701505397 AT5G54290_at 9.10797270168257 9.2198329576448 9.74076561736723 9.69726343345333 10.1238543588635 9.50164563068713 9.67487477160472 9.1671559035155 9.31585676018173 9.4471723772285 9.72171408947936 10.0120581717586 9.7684137039821 9.77346075246853 9.71977986874782 10.1599401543272 10.0547096421845 9.94764297145672 9.176844806894 0.166603067942184 0.165537912916860 0.171250816368387 0.174445443981871 0.162923645725392 0.173578919921297 0.165224229461653 0.160186833778951 0.165253781987321 0.168413556010274 0.152331303927292 0.154167682790277 0.163016340735826 0.158868345388422 0.164121741060434 0.152953974798063 0.167486595054164 0.167414502518938 0.170601704347069 5 5 + 22070111 22071123 22070571 22068263 22071254 + gene protein_coding_gene TRUE TRUE AT5G54290.1 cytochrome c biogenesis protein family similar to c-type cytochrome biogenesis protein [Descurainia sophia] (GB:AAQ95739.1); contains InterPro domain Cytochrome c biogenesis protein, transmembrane region; (InterPro:IPR003834) -0.181664151990784 -1.54869622213491 0.150826134832959 1 1.13656734737260 19.1331737888867 -0.181664151990784 0.140518608216613 AT5G54750_at 8.66358968928503 8.65979904609905 9.23044792266488 9.24006700722203 9.03892962900263 9.3469163005611 8.16764271967087 8.35515494959625 7.56554159555083 8.02961585497805 9.18346514465618 9.32329948937618 8.95612957310911 9.23405072740003 9.31532587762402 8.96360123271091 8.82436838964535 8.90738718757448 8.19786957709454 0.128751454683238 0.126872928270997 0.134008246405806 0.122909078611486 0.127401098830203 0.135578872274891 0.141292129660738 0.138488809705023 0.182347169879598 0.141488256684066 0.128092051132469 0.127778625331101 0.122909078611486 0.125817022655097 0.128681786623429 0.136142997846768 0.126548812393134 0.135977062081003 0.136008768040448 5 5 + 22259320 22260604 22260110.182 22258707 22260947 + gene protein_coding_gene TRUE TRUE AT5G54750.1 transport protein particle (TRAPP) component Bet3, putative similar to hypothetical protein LOC445207 [Danio rerio] (GB:NP_001003601.1); similar to Os03g0402000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050321.1); contains InterPro domain Transport protein particle (TRAPP) component, Bet3; (InterPro:IPR007194) 0.136449935627902 1.54815028487410 0.150956514516838 1 1.13587705227912 17.3475496389977 0.136449935627902 0.0624253826020425 AT5G58640_at 6.91442297313972 7.23531045482896 7.70440554854837 8.1971509573146 7.90924335303908 7.87945027414164 6.07378470528517 6.8204533394564 6.42498413008316 5.83000626290978 7.36780773316163 7.51328655599274 7.26552112382879 7.63598060404022 7.63127724591576 7.66289530211262 6.93569577807513 7.41167427443064 6.14725057900476 0.202514720286176 0.197167703286962 0.203885218888967 0.209484202710059 0.207359840339022 0.201950569170228 0.193596195022038 0.203141698962188 0.213348427675440 0.215523821874342 0.197062192078416 0.195907350481244 0.203945777722034 0.201110599744512 0.197154197908538 0.193248232001274 0.215267329570101 0.200560269482774 0.20236049111112 5 5|0 +|/ 23715355 23716704 23716303.8 23715067 23716993 + gene protein_coding_gene TRUE TRUE AT5G58640.1|AT5G58640.2 selenoprotein-related|selenium binding similar to selenoprotein-related [Arabidopsis thaliana] (TAIR:AT3G47300.1); similar to SelT/selW/selH selenoprotein [Medicago truncatula] (GB:ABE80771.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893)|similar to selenoprotein-related [Arabidopsis thaliana] (TAIR:AT3G47300.1); similar to SelT/selW/selH selenoprotein [Medicago truncatula] (GB:ABE80771.1); similar to Os05g0467300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055791.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893) 0.198815286539606 1.54629554375968 0.151400195338459 1 1.13353296680628 14.1228265263162 0.198815286539606 0.164553828907831 AT5G53750_at 4.82269457384275 4.19319963134879 4.95336048387521 4.66178422508308 4.22413072268161 4.70045868333577 4.10292292901532 4.21657781982302 4.49601057299274 4.10198973354364 5.76680146872656 5.84194715239814 6.08194529066326 5.74276604358655 5.82588619338899 6.18498997168909 6.1231130064766 6.06961302582382 3.70734784956851 0.252627653043279 0.248454876998167 0.249317714993125 0.248454876998167 0.250126773538014 0.253990367145228 0.248454876998167 0.253481705083021 0.248454876998167 0.248454876998167 0.270223819599615 0.255570891540633 0.26239405576515 0.249099514617373 0.262445043979799 0.264760633267502 0.264052454284914 0.249834936867225 0.248454876998167 5 5 + 21835410 21835735 21835576.125 21834592 21836069 + gene protein_coding_gene TRUE TRUE AT5G53750.1 similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G27460.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93687.1); contains InterPro domain CBS; (InterPro:IPR000644) 0.185792882415905 1.54512187050482 0.151681542409413 1 1.13205050940810 9.51259887752357 0.185792882415905 0.146952489422733 AT5G25450_at 3.46965341502487 3.39099868917266 4.32119084718043 4.46078444324686 3.57896715260679 4.42660455703412 2.59419147095332 3.71297274331058 3.81184145648520 4.09452400772764 4.13680961511104 3.69220712607015 3.92931169147583 3.87877653042927 4.53416473711764 3.96355005697213 3.56585419588282 3.75210711415644 3.95625959295428 0.231209876591095 0.230612863343963 0.232558596352246 0.229106265614182 0.236280559967012 0.236563907779595 0.233429101885888 0.236025277161185 0.2299660494054 0.235612222865571 0.231111873793221 0.229708332013165 0.226146953978792 0.230481454381202 0.231969011617014 0.226146953978792 0.233108883552250 0.227999715201155 0.226626144727042 5 5|0 +|/ 8857041 8857818 8857372.75 8857000 8858479 + gene protein_coding_gene TRUE TRUE AT5G25450.1 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative similar to ubiquinol-cytochrome C reductase complex 14 kDa protein, putative [Arabidopsis thaliana] (TAIR:AT4G32470.1); similar to Ubiquinol-cytochrome c reductase complex 14 kDa protein (CR14) (GB:P48502); contains InterPro domain Cytochrome bd ubiquinol oxidase, 14 kDa subunit; (InterPro:IPR003197) -0.262448989412008 -1.54406005084116 0.151936469366310 1 1.13070991593550 7.68732340771168 -0.262448989412008 0.244481205029766 AT5G55840_at 2.26835342714747 2.13369961750377 2.74802541116427 2.65201763604153 3.25483019875871 2.57220668397063 2.60969821142294 2.37839533883143 2.72935556372185 2.25096588107231 2.89577182547273 2.97281600164288 2.79245130633432 2.86056244147007 2.87825631728115 3.09453081371377 3.16973102320526 2.43709837621667 2.1823801757973 0.247266681039268 0.245360180280038 0.258334132264083 0.253001468690751 0.245424307554218 0.249372575713861 0.241484282353906 0.250175399312738 0.251866790811622 0.245379577263963 0.245688310489579 0.243148304538736 0.243728545288255 0.241739952282551 0.249944291031553 0.252879017719943 0.248398779855364 0.246760040981373 0.241484282353906 5 5|0 +|/ 22619090 22619588 22619403.1 22615624 22619725 + gene protein_coding_gene TRUE TRUE AT5G55840.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); similar to Os03g0603700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050629.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.172531923469596 1.54404314961376 0.151940530116940 1 1.13068858187898 5.21476305062056 0.172531923469596 0.127969802002009 AT5G24490_at 12.5106031456418 12.3150137480395 12.3210899464830 12.1289684826885 12.8604156853555 12.6695389291958 11.0188789132003 10.8806119123556 11.8869551332125 11.9610266327139 12.5603306337655 12.4377905512244 12.1838736165483 12.4189613525479 12.6030405417479 12.2919819040517 12.2092920171180 12.3802549235503 11.9799329167047 0.0555014318177797 0.0535662719649317 0.0541178035473115 0.0539423864158872 0.0538113906252807 0.053124070980992 0.0583647350338062 0.0556049538739086 0.0620851786591641 0.0549927908720165 0.0529580277421281 0.0526761182803359 0.0526761182803359 0.0526761182803359 0.0551725719541243 0.0526761182803359 0.0540796085029379 0.0563516287540518 0.0540711123112153 5 5 + 8366311 8367157 8366810.636 8365604 8367463 + gene protein_coding_gene TRUE TRUE AT5G24490.1 30S ribosomal protein, putative similar to chloroplast-specific ribosomal protein [Lycopersicon esculentum] (GB:AAU03364.1); contains InterPro domain Rudiment single hybrid motif; (InterPro:IPR011054); contains InterPro domain Sigma 54 modulation protein/ribosomal protein S30EA; (InterPro:IPR003489) 0.136068294935966 1.54315235110855 0.152154690629680 1 1.12956434475773 24.2523045554265 0.136068294935966 0.0625677141933197 AT5G57710_at 9.80214266962511 9.94545563422392 10.4165493139787 10.2924542794033 10.7257347454197 10.2829053666731 9.8854856861537 9.91247540676434 10.2070259223244 10.5316019924203 11.2061243327711 11.0717904858237 10.9424598221945 10.7046385622679 10.5064892074431 10.9321700007256 10.5528910716183 10.5322221286611 10.3865098975141 0.109675640019719 0.108219133941306 0.102954135611323 0.102954135611323 0.105116774561410 0.106459460559211 0.103958104811002 0.107464795254693 0.116133943134555 0.105619587017419 0.107321534634914 0.104888766149887 0.105940714696443 0.114740376951994 0.107430991983762 0.102954135611323 0.109358630621876 0.113174247398383 0.106276190931124 5 5 + 23404766 23405251 23405044.364 23402020 23405579 + gene protein_coding_gene TRUE TRUE AT5G57710.1 heat shock protein-related similar to heat shock protein-related [Arabidopsis thaliana] (TAIR:AT4G30350.1); similar to Os08g0250900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061376.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86426.1); similar to 101 kDa heat shock protein; HSP101-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05509.1); contains InterPro domain Clp, N terminal; (InterPro:IPR004176) -0.145563217337990 -1.54035106456547 0.152829875576642 1 1.12603151052304 20.7484724572091 -0.145563217337990 0.0834913855644574 AT5G62570_at 7.55024750944903 7.76919089360363 9.03085594468128 8.89633047483963 9.06848482653804 8.45504864387774 8.2682005520485 8.17844552313442 8.02510640148185 7.9236006265259 8.68261922243841 8.47021298406437 8.44505427308614 8.6246853456767 7.76097154301277 8.83629963585069 8.59802432587515 8.34218172147796 8.00662866890212 0.136406442262407 0.123252369864739 0.134379077837125 0.131975695357264 0.128522528404265 0.129544548255712 0.133032813054972 0.128771856728825 0.144189480043963 0.127675300129329 0.129856700510509 0.123130789788826 0.12474829226572 0.140968411579150 0.133712109620444 0.123130789788826 0.138317816370206 0.12822787500883 0.125656310143527 5 5 + 25133564 25134150 25133896.636 25131617 25134193 + gene protein_coding_gene TRUE TRUE AT5G62570.1 calmodulin-binding protein similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to hypothetical protein MtrDRAFT_AC146914g39v1 [Medicago truncatula] (GB:ABE91845.1); contains InterPro domain Calmodulin binding protein-like; (InterPro:IPR012416) -0.164026076427772 -1.53663935039013 0.153728518864551 1 1.12135645543801 16.6296595612241 -0.164026076427772 0.116139307329783 AT5G60310_at 2.42303496081517 2.13614824586304 2.39392848866548 2.27351462541719 1.97502072262183 2.16687497447537 1.53588302087311 2.22009845131741 2.28830508039570 2.51022829448976 2.166309975044 2.2538959195793 2.44081425063661 2.14091390982264 2.38945648437688 2.26972385698695 2.12400587166172 1.89181641399356 2.02514162073280 0.244732188672689 0.252898371518069 0.25403502628032 0.257954899656930 0.265057310611866 0.251087841493691 0.255108282671644 0.242357210027676 0.253565428554194 0.248126763878383 0.238863431303494 0.249569726071119 0.242509122236372 0.241294424501301 0.248853788788656 0.245255559753968 0.240057537995427 0.242873303284761 0.243922198722222 5 5 + 24286538 24287165 24286833.909 24285237 24287208 + gene protein_coding_gene TRUE TRUE AT5G60310.1 lectin protein kinase, putative similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45430.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60300.3); similar to Os04g0531500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053397.1); similar to OSIGBa0125M19.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86404.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.175927937417863 -1.53662738115042 0.153731424166584 1 1.12134139070902 4.3826506448238 -0.175927937417863 0.134244281295446 AT5G62490_at 1.11026805876223 0.969630833385718 1.50376069887355 0.862601295260499 0.79764130279197 1.28661794324771 1.02584099977194 1.24059722183487 1.61210957046933 0.890609016124217 0.950711982034453 0.766531516670826 1.36251368525446 0.880746354728747 1.14972963841103 0.971724386677289 1.49349802801862 1.46053909389353 1.60897840536764 0.172603725872319 0.171809529924580 0.173726048333316 0.182929662904195 0.176026285271649 0.175613940677960 0.170940301212773 0.171520031852315 0.177811594391883 0.175180686843377 0.176979426973118 0.174099305386634 0.175238399827824 0.181214087142713 0.174755683527482 0.182047424740220 0.175721821428341 0.179207475131758 0.170260379976854 5 0|5 /|+ 25107752 25108367 25108101.444 25107356 25108785 + gene protein_coding_gene TRUE TRUE AT5G62490.1 ATHVA22B (Arabidopsis thaliana HVA22 homologue B) Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. Identical to HVA22-like protein b (AtHVA22b) (HVA22B) [Arabidopsis Thaliana] (GB:Q9SYX7;GB:Q9XFG2); similar to ATHVA22A (Arabidopsis thaliana HVA22 homologue A) [Arabidopsis thaliana] (TAIR:AT1G74520.1); similar to HVA22-like protein c , putative [Solanum demissum] (GB:AAU93595.1); similar to Os02g0747500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048116.1); similar to Os11g0602300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068230.1); contains InterPro domain TB2/DP1 and HVA22 related protein; (InterPro:IPR004345) -0.184357622904189 -1.53619812496566 0.153835649435405 1 1.12080116700142 2.34965229409015 -0.184357622904189 0.146441735943460 AT5G55800_at 1.06654797136864 0.926946041597472 1.81086560210055 1.47128391674541 1.11927985251741 0.88335476467588 1.01595767245204 1.29017920884290 1.44072441997870 1.29049925758899 1.18014327467082 1.06832979772852 1.35272803517471 0.901201285440555 0.872945703144619 1.29928595893241 1.30744359635788 1.55411696511318 1.9609374297483 0.199578733657213 0.202816607150906 0.204053752744015 0.208491007765011 0.198001040525199 0.200054979794932 0.198698261817113 0.196686495544795 0.196846307713722 0.201133885703558 0.203655583773154 0.195655601521069 0.193663260570363 0.217300865654236 0.20707800220018 0.193270284743062 0.209488043908825 0.203139866160338 0.195592725071760 5 5 + 22600058 22600613 22600260 22598920 22600656 + gene protein_coding_gene TRUE TRUE AT5G55800.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55780.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G26550.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) -0.148111476226760 -1.53562060038611 0.153975971990709 1 1.12007448980679 2.57609089354204 -0.148111476226760 0.089196630811186 AT5G25890_at 3.01115900465813 3.63552745083178 4.17818183982141 4.44442692966665 3.9486278034282 3.62914140629373 3.48768522974969 3.48892341514734 2.94180027281801 3.02959350329288 3.55438805477572 4.55496761617284 4.06767661863945 4.00429268807176 3.71464390746353 4.62293811699647 4.5268045269799 4.04454492125173 3.40104509715237 0.271428694841562 0.272658080006606 0.282350005996079 0.273931668451829 0.268811798658929 0.27814574299627 0.275257247736158 0.270985690496647 0.288376552984036 0.275369265950849 0.268444574006282 0.268444574006282 0.274672497031728 0.268778097414863 0.277093507698819 0.268444574006282 0.275677667728292 0.273624108677543 0.270323553056037 5 5|0 +|/ 9033503 9034401 9033871.4 9033418 9034837 + gene protein_coding_gene TRUE TRUE AT5G25890.1 IAA28 (IAA-ALANINE RESISTANT 2); transcription factor encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene. Identical to Auxin-responsive protein IAA28 (Indoleacetic acid-induced protein 28) (IAA28) [Arabidopsis Thaliana] (GB:Q9XFM0;GB:Q9S9V6); similar to IAA18 (indoleacetic acid-induced protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51950.1); similar to Auxin-responsive protein IAA17 (Indoleacetic acid-induced protein 17) (GB:Q75GB1); similar to Os02g0228900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046357.1); similar to Os01g0190300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042263.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.172753768761288 1.53495449757113 0.154137954994028 1 1.11923656318106 7.35817330864045 0.172753768761288 0.129825084631748 AT5G08260_at 7.88407238516668 7.88537777851109 8.13822909566682 8.20788093126399 8.79925165968703 8.09055730192715 7.90255897750337 7.83246746104022 6.6056349923686 7.08527982211303 7.86788425144968 8.3923353990675 7.7873719131871 7.73685174020178 8.27895996596544 6.96914353977627 7.61597449912747 8.21064965384765 6.43976888484951 0.175235316547187 0.175213192699576 0.178251497052267 0.178806518324928 0.182610776983903 0.178392595163058 0.172851107224029 0.179310535018571 0.188766636581676 0.172508832138007 0.175356227989922 0.169813880325638 0.171661720086350 0.184649863225908 0.182889397327058 0.169813880325638 0.174103350781994 0.17588197519786 0.184861098604268 5 5|0 +|/ 2660356 2661130 2660759 2657152 2661417 + gene protein_coding_gene TRUE TRUE AT5G08260.1 SCPL35 (serine carboxypeptidase-like 35); serine carboxypeptidase similar to SCPL34, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G23210.1); similar to OSIGBa0153E02-OSIGBa0093I20.21 [Oryza sativa (indica cultivar-group)] (GB:CAH67892.1); similar to serine carboxypeptidase (carboxypeptidase D), putative [Musa acuminata] (GB:ABF70080.1); similar to OSJNBa0038O10.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE05642.2); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) -0.168577303202450 -1.53304131999327 0.154604027006063 1 1.11683109755671 15.3763615838982 -0.168577303202450 0.123829481525464 AT5G41820_at 2.02697127806994 2.18730442994744 2.44588350301192 2.29168827362004 1.63044839926685 2.30826652672298 1.81942936921648 2.12358050415515 2.05333797551583 2.17901839587159 2.24034684461738 2.01552089056029 2.55965256780019 2.04493312875870 2.21150773806356 2.20652982031018 2.06685751616695 2.11767273386449 2.56152207418682 0.250544344875259 0.243686362861836 0.242986316291694 0.248369155910059 0.255371871397139 0.247926365872571 0.250878907996383 0.248112139361196 0.260464215834367 0.244955283229247 0.242986316291694 0.245354481354246 0.245308616085003 0.245134199900645 0.254049952908774 0.247363619192954 0.242986316291694 0.242986316291694 0.242986316291694 5 0|5 /|+ 16760032 16760601 16760375.875 16758032 16760661 + gene protein_coding_gene TRUE TRUE AT5G41820.1 geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related similar to protein binding / protein prenyltransferase [Arabidopsis thaliana] (TAIR:AT4G24490.2); similar to Rab geranylgeranyltransferase, alpha subunit [Bos taurus] (GB:NP_001015614.1); similar to Os06g0677500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058357.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein prenyltransferase, alpha subunit; (InterPro:IPR002088); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.175441884850459 -1.53260313041472 0.154710947470819 1 1.11628041123462 4.32794843727258 -0.175441884850459 0.134207011993853 AT5G43790_at 3.91889105327343 4.03473031644531 4.59114737329666 5.13950288883169 5.35892975071298 5.10994068889237 4.53873036964586 4.37753225796926 3.18330309919355 3.93717187914356 3.91291481578923 4.30216288012285 4.18861779715906 4.13190286792183 4.07847299067277 4.7262437834549 4.93906129108884 3.58425295428218 4.16665841572987 0.20945597752369 0.207887040034394 0.215334508724636 0.208845138039609 0.207598926191960 0.210904478122494 0.212470090820540 0.209470146478546 0.211657506004171 0.206364867147369 0.208948469120985 0.206605527236467 0.208925482270576 0.215847016696914 0.211818873569709 0.212677270594266 0.218318578291192 0.208553733375313 0.207238118360963 5 5 - 17609346 17609813 17609611.182 17609234 17610708 - gene protein_coding_gene TRUE TRUE AT5G43790.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G37380.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE78210.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.159504579086897 -1.53148250374618 0.154984678729099 1 1.11487251926783 8.63134132267533 -0.159504579086897 0.109735337857438 AT5G25530_at 1.77486330336473 1.65384960511208 1.55516195018184 1.55859635312075 1.81499915894553 2.00138481576707 1.86661886412079 1.33329712145353 2.24738505576761 1.91086995158861 1.92990837182279 1.57133846198882 2.18461714266308 2.18802925381951 2.10663105341473 1.94762477081537 1.46994853616617 2.37408926801740 2.01956334885887 0.192880746449721 0.188013646663531 0.191410350941303 0.187147447872391 0.19257529018483 0.186897323142679 0.194079439036045 0.208875850451681 0.193074176844788 0.1856580623828 0.190911178620664 0.192814550969218 0.197292094255029 0.196993126146616 0.193110282037149 0.1856580623828 0.201374843219477 0.200627986950516 0.196733614874015 5 5 - 8889671 8890299 8889918.182 8889668 8890957 - gene protein_coding_gene TRUE TRUE AT5G25530.1 DNAJ heat shock protein, putative similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT4G28480.1); similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT2G20560.1); similar to Os05g0562300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056320.1); similar to DnaJ-like protein [Nicotiana tabacum] (GB:AAF05720.1); similar to Os08g0161900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061053.1); contains InterPro domain HSP40/DnaJ peptide-binding; (InterPro:IPR008971); contains InterPro domain Chaperone DnaJ, C-terminal; (InterPro:IPR002939); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.153644143101373 -1.53075390689217 0.155162876267337 1 1.11395748640519 3.71024446788005 -0.153644143101373 0.0999872355450554 AT5G52340_at 1.30976055579115 1.08466784494592 1.58740893613972 1.37655088218107 1.27095806839865 1.02125972299656 1.18339295918120 1.07963213239079 1.73672994605906 1.44974450288035 1.33571109366273 1.31397075463817 1.71491851744807 1.79563387764779 0.916022106734265 1.15561322431227 1.42136956390966 1.51197096685735 1.72365743966045 0.217111812504086 0.220541340527396 0.217111812504086 0.220631131764881 0.22018982708941 0.217111812504086 0.223525247252018 0.217111812504086 0.221639143356775 0.224943627513269 0.219395205408370 0.226999746928743 0.223205763387207 0.221206863302621 0.221336704464303 0.219101632387646 0.227346530804901 0.227945576600968 0.219023152269668 5 5 + 21270103 21271058 21270630.091 21268028 21271165 + gene protein_coding_gene TRUE TRUE AT5G52340.1 ATEXO70A2 (exocyst subunit EXO70 family protein A2); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70A3 (exocyst subunit EXO70 family protein A3), protein binding [Arabidopsis thaliana] (TAIR:AT5G52350.1); similar to (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1), protein binding [Arabidopsis thaliana] (TAIR:AT5G03540.1); similar to Os11g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065801.1); similar to H0723C07.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86037.1); similar to Os12g0159700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066212.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.138587247926299 -1.53046095094705 0.155234576571745 1 1.11358964229403 2.75538483409542 -0.138587247926299 0.0709826734484603 AT5G17510_at 3.17805235163075 3.74991634904106 4.40093635404384 3.88683667999363 4.76404636075791 4.90572303732879 3.70586288208093 4.05183270447185 3.18471040306692 2.93043607768890 3.57894909060983 4.10316770500539 3.96567573937968 3.96437292864963 3.91355441123093 4.00148721408697 4.06781702289166 3.26144357599562 2.75079855407981 0.216920893830042 0.21956004787458 0.226169186566475 0.239747097571714 0.239347174947837 0.226531381895396 0.216074235797755 0.213370766062971 0.218318879446801 0.222236212924427 0.21623933157294 0.212343366519240 0.216558995017335 0.219886678290712 0.228144854883681 0.215617760788932 0.221655264989642 0.229606983295581 0.228038559846863 5 5 - 5770666 5771077 5770867.182 5769975 5772397 - gene protein_coding_gene TRUE TRUE AT5G17510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03460.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG22017.1) 0.184666162165844 1.52976938480766 0.155403950128862 1 1.11272146099180 7.48658757621514 0.184666162165844 0.147968751174261 AT5G16590_at 3.53745315612448 4.84201723416637 3.54952520434410 3.99739901301339 4.70660807718752 4.98176763995233 4.72484011300137 5.87329019493954 6.21017819893903 5.15467066312059 8.49910620108675 8.38635087780047 8.13344333822218 7.55310128081801 8.37016247346936 7.41078308247521 5.54847390633604 6.78820457469727 6.03588207557268 0.279854357064911 0.260909840528892 0.270093307360112 0.269223545481138 0.261196680200457 0.277450535913911 0.264689482873471 0.263294963458339 0.278753795588665 0.265377044189963 0.272108251306364 0.260909840528892 0.263995354258649 0.287305054021611 0.267018194871925 0.260909840528892 0.282368642042506 0.266845042925594 0.264413841085023 5 5|0 +|/ 5433301 5433875 5433504.7 5431684 5434137 + gene protein_coding_gene TRUE TRUE AT5G16590.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G02880.1); similar to Os03g0223000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049422.1); similar to Putative leucine-rich repeat transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAN05336.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.319011735981322 -1.52737586163837 0.155991396207378 1 1.10971850984232 11.2198360104614 -0.319011735981322 0.314232616513114 AT5G38020_at 1.01480890414389 1.24945809096816 1.28212611410357 1.74527726114959 0.863902362542858 1.24779923610437 1.11528159747777 1.18399978399841 0.594478156368375 0.803622333637412 0.818381701204877 1.24061236754436 1.25910490698648 1.18815728206363 1.19416256381948 1.12079457455991 0.79396977878349 1.27083092157163 0.977307037727735 0.213315279615487 0.204371703054695 0.211736521980179 0.206638620607559 0.209991884100646 0.207069187807285 0.212771071755601 0.210775165181759 0.217096081008010 0.208072603230588 0.213135127327113 0.214020586653329 0.204371703054695 0.209170714274821 0.214174869061035 0.206648942168165 0.212963559074401 0.209783910263316 0.214303662341114 5 5 - 15183189 15184086 15183619.727 15182882 15184959 - gene protein_coding_gene TRUE TRUE AT5G38020.1 S-adenosyl-L-methionine:carboxyl methyltransferase family protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G21950.1); similar to Benzoate carboxyl methyltransferase (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) (GB:Q9FYZ9); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.160640171469272 1.52686693590136 0.156116551180763 1 1.10908037231526 2.16410880446670 0.160640171469272 0.112374751837738 AT5G40830_at 4.94642813231365 5.4367133370408 5.74238998242378 5.59449599443356 6.54329413939913 5.7617910264972 7.16723561108599 6.67627346581324 4.93046475301263 5.68121542831443 7.66806475467476 8.5465770872245 6.7015604304091 7.470958415102 7.57083632555405 6.5324442539857 5.99402248298436 6.09132055294474 5.21535038459694 0.318604803907154 0.318604803907154 0.325571006848541 0.324493071545091 0.318604803907154 0.318604803907154 0.322591832849846 0.318604803907154 0.319700525655764 0.318604803907154 0.322696490940622 0.324929555884008 0.318604803907154 0.325104417613315 0.322018684390749 0.320112810270610 0.328272549048478 0.327591247389462 0.318604803907154 5 5 - 16372090 16372397 16372215.5 16371608 16373517 - gene protein_coding_gene TRUE TRUE AT5G40830.1|AT5G40830.2 ATRAD3 (Arabidopsis thaliana Ras Associated with Diabetes protein 3) Ataxia telangiectasia-mutated and Rad3-related (ATR), plays a central role in cell-cycle regulation similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27230.1); similar to hypothetical protein [Prunus persica] (GB:AAO14627.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) -0.209806723338274 -1.52580887481503 0.156377028796441 1 1.10775409299129 12.1574026577099 -0.209806723338274 0.182656156851121 AT5G63910_at 7.82459295681569 7.49869353948411 8.09804327105835 8.2388988065211 8.82939910420078 7.82956728040116 8.00461114079119 7.36547414516544 6.78488201759411 7.12429965384382 7.93755830630338 7.97342934887704 7.93649996863746 7.8850223765017 8.11231423626737 7.8329704983261 7.82858820678258 7.50606209451689 7.11136801420996 0.218222997602140 0.222782325264527 0.21952362884249 0.225571664650891 0.228499301237559 0.230858358487372 0.223231333175228 0.226098520188942 0.235320238122704 0.224450447502267 0.223952374793757 0.223892369566663 0.218222997602140 0.224698959499970 0.226017591495619 0.218222997602140 0.239712408171051 0.224810714952107 0.22890072171965 5 5 - 25589283 25589990 25589719.091 25589091 25591313 - gene protein_coding_gene TRUE TRUE AT5G63910.1 Identical to Probable prenylcysteine oxidase precursor (EC 1.8.3.5) [Arabidopsis Thaliana] (GB:P57681); similar to hypothetical protein LOC550289 [Danio rerio] (GB:NP_001017626.1); contains InterPro domain Prenylcysteine lyase; (InterPro:IPR010795) -0.234366458162664 -1.52351080755862 0.156944076945667 1 1.10487539544776 15.402862792926 -0.234366458162664 0.214351132066571 AT5G04260_at 8.52732764602456 8.41850476172243 9.3395480871006 9.39724170443833 9.44868089562675 9.04749354632157 8.49960628952686 8.23402394984432 7.34508423341288 7.82599797324185 8.93048846548753 8.4983013742921 8.72326623722677 8.68806856215074 8.80925177621258 9.03008885821614 8.8156629133772 8.83960882800151 7.99606568161876 0.127941312959100 0.124829510058241 0.126565457031277 0.126840787337671 0.124645459183288 0.128254299834195 0.129362323866969 0.130864046315404 0.167445029116339 0.137022045514196 0.131955975385028 0.124124275213172 0.126046014697610 0.124907716047913 0.130804983432066 0.121851131739315 0.144383991059624 0.125069475255541 0.131800718093156 5 5|0 -|/ 1178947 1179953 1179562.125 1178645 1180037 - gene protein_coding_gene TRUE TRUE AT5G04260.1 thioredoxin family protein Identical to Thioredoxin-like 8, chloroplast precursor [Arabidopsis Thaliana] (GB:Q8VZT6;GB:Q9FYD5); similar to (THIOREDOXIN-LIKE 5), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT5G06690.1); similar to Thioredoxin-like 5, chloroplast precursor (GB:Q9FG36); similar to Os02g0819200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048532.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.145215284293945 1.52331377849034 0.156992776890470 1 1.10462870807181 17.1211657382232 0.145215284293945 0.085946731068851 AT5G23030_at 0.998700996903973 1.09602563693555 1.54585780158179 1.32066515225527 1.44160933415590 1.38806723191410 1.01769570328453 1.12129446674714 1.60606800097437 1.40815707591695 1.24104380830242 1.38274451605235 1.80837169470158 1.46669319375613 1.30106664823210 1.90003874005759 1.74549308222779 1.38110140842369 1.3451281146734 0.215253643870077 0.211307604628758 0.212802888869393 0.211988402839293 0.215925279340854 0.210126229597627 0.216333248551252 0.211907521491736 0.224867815200820 0.219636529033107 0.211126640155883 0.210537413504899 0.210126229597627 0.218589209714777 0.215421393238535 0.211316630150439 0.21355768263402 0.213644898992597 0.218130745913648 5 5 + 7727181 7727687 7727434.455 7726791 7727812 + gene protein_coding_gene TRUE TRUE AT5G23030.1 TET12 (TETRASPANIN12) Member of TETRASPANIN family similar to TET11 (TETRASPANIN11) [Arabidopsis thaliana] (TAIR:AT1G18520.1); similar to Putative Sequence-associated protein [Brassica oleracea] (GB:AAV25876.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) 0.128573682039919 1.52263883367897 0.157159703409744 1 1.10378380077997 2.73195797396767 0.128573682039919 0.0470069716341868 AT5G44520_at 7.96497858271659 8.07683500528266 8.73088190986495 8.38667201775583 9.13212824937767 8.72348530774208 9.07914520925442 8.7356991348197 8.18286769808816 8.10836574789926 9.1840183490052 9.25795736427025 8.86151723385384 9.00557924631172 9.29614901820454 9.27782601055463 9.23585620867469 9.12779561483977 8.0131693396836 0.164744633664074 0.160962905867815 0.159497152427671 0.171927204116369 0.155926857425482 0.165976047408053 0.153227808257622 0.160162600924502 0.170504547133778 0.183660105947694 0.159206035278327 0.153648457265175 0.158442900916274 0.154655067019969 0.165616735090846 0.155129718058268 0.164710629927800 0.157977300579242 0.17344257854173 5 5|0 -|/ 17951852 17952740 17952263.571 17951514 17953754 - gene protein_coding_gene TRUE TRUE AT5G44520.1 ribose 5-phosphate isomerase-related similar to ribose 5-phosphate isomerase-related [Arabidopsis thaliana] (TAIR:AT3G04790.1); similar to Os03g0781400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051457.1); similar to ribose 5-phosphate isomerase-like [Saussurea involucrata] (GB:ABC68263.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788) -0.159558997964296 -1.52105561993408 0.157551866691045 1 1.10180280403047 17.2323806650707 -0.159558997964296 0.111608394414061 AT5G13230_at 1.99342616531596 2.05787264179298 2.11473325075137 2.28546568714291 2.05490654961540 2.22778092603778 2.00146553267609 1.75413198415691 1.55649466878945 1.52982317688312 2.17844602304551 1.99670084067705 1.96965395687737 1.91561065262326 1.92672546774507 2.02845005989018 2.21690502237113 2.01511197815975 1.89525553464837 0.206012749670876 0.207536518576683 0.207123608930782 0.201937710883924 0.202612737797891 0.204765901315532 0.205666961245033 0.205209990634898 0.209170483204918 0.205891112291876 0.207036321746716 0.202511388978388 0.202661346276722 0.202832667019854 0.209190888335772 0.207944495847139 0.210052731810146 0.205369315795953 0.207329887777248 5 5 + 4224386 4224940 4224686 4222517 4224985 + gene protein_coding_gene TRUE TRUE AT5G13230.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G27610.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAL93067.1); similar to Os03g0441400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050460.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.133256070873441 1.51830055886335 0.158236322623617 1 1.09835853616273 3.9069603223265 0.133256070873441 0.0610278069145192 AT5G65800_at 0.914558358501791 1.55744616972706 1.45821049196522 1.47772345895050 1.13607401088966 1.38532988592239 0.99208595331053 0.844204158031019 1.39328386156366 1.06792828838397 1.43984022928572 1.32628163410089 1.21150791569590 1.46167196027259 1.18111927982795 1.54600740153279 1.68774891801315 1.62072490693801 1.20550763942802 0.219483021979626 0.221501288795557 0.221879588730374 0.220692198109018 0.221076216508398 0.223447753586869 0.224699902833507 0.218085672189333 0.239079813149128 0.218727218741895 0.224231769090287 0.223484149444405 0.221124526408792 0.221738303058083 0.23060631966738 0.225430778550182 0.219928442964156 0.224115311857365 0.234731355734368 5 5 - 26348435 26348884 26348714.909 26347972 26350038 - gene protein_coding_gene TRUE TRUE AT5G65800.1 ACS5 (ACC SYNTHASE 5); 1-aminocyclopropane-1-carboxylate synthase 1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition. Identical to 1-aminocyclopropane-1-carboxylate synthase 5 (EC 4.4.1.14) (ACC synthase 5) (S-adenosyl-L-methionine methylthioadenosine-lyase 5) (Ethylene-overproduction protein 2) (ACS5) [Arabidopsis Thaliana] (GB:Q37001;GB:O49537;GB:Q9S9C3); similar to ACS8 (1-Amino-cyclopropane-1-carboxylate synthase 8) [Arabidopsis thaliana] (TAIR:AT4G37770.1); similar to ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT2G22810.1); similar to ETO3 (ETHYLENE OVERPRODUCING 3), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G49700.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Cucumis sativus] (GB:ABI33818.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Diospyros kaki] (GB:BAB89348.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Actinidia deliciosa] (GB:BAA31137.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.165522003592046 1.51545777795528 0.158945273733896 1 1.09480861217016 2.5490054161624 0.165522003592046 0.122084271383989 AT5G19200_at 2.93063054027045 3.39163579994576 3.80676199562819 3.77243552670715 3.84256009551875 4.09198926770774 2.35510408773549 2.76520222256731 2.29799316909915 2.10952852832633 2.40719729249762 2.11486254544012 2.45544528790403 2.59083088476207 2.30181892696784 2.34321103836082 2.51340743919171 2.18078545326132 2.47038743038776 0.208884995968647 0.201293444413849 0.210818638866271 0.225476249363892 0.204824867467125 0.211550735700184 0.201293444413849 0.208702228445632 0.221700066571461 0.204282900074267 0.212694921105947 0.207768457241772 0.201293444413849 0.220339610654891 0.206051680438891 0.207469596486005 0.213716172701621 0.204593924442005 0.201293444413849 5 5 + 6459443 6460595 6460128.091 6458955 6460858 + gene protein_coding_gene TRUE TRUE AT5G19200.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G06060.1); similar to Short-chain dehydrogenase/reductase SDR [Medicago truncatula] (GB:ABE89395.1); similar to Os02g0701900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047846.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.161246091211931 1.51534129783810 0.158974380940938 1 1.09466324453651 5.69758055925308 0.161246091211931 0.115325002738588 AT5G61300_at 4.34308941379546 4.408623361992 4.66967895464087 5.07210229827631 4.50003268562885 5.04612875728743 3.78337709830182 4.46804302528711 4.28869921334816 4.41429673409387 5.53570203476887 5.95527417246682 5.16078036404622 5.43494896035014 4.80887259374764 5.20121128048662 5.22710865908481 4.84679103864821 4.70984185317029 0.193763711052070 0.188717488660097 0.193536458830509 0.188717488660097 0.189030258019811 0.196618551202954 0.192478537034284 0.191867979235361 0.194179225144863 0.192249018799518 0.190613031242051 0.191882033584768 0.201405405299777 0.194398920663532 0.199883743298219 0.188717488660097 0.195343732786365 0.195383285855771 0.196452802989672 5 5 - 24668132 24668649 24668395.455 24667930 24670002 - gene protein_coding_gene TRUE TRUE AT5G61300.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G07790.1); similar to Os12g0577800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067117.1) -0.196639158503091 -1.51437608653378 0.159215755354446 1 1.09345892086775 9.4075254851449 -0.196639158503091 0.167177218255744 AT5G10940_at 7.1457832768024 6.93288859326192 8.08565964751114 7.87002230753302 8.43364508858246 7.90781799698286 7.27552080234203 6.86209781121878 7.32356937222432 7.12406317674248 7.75081232802007 7.84446946783565 7.68365669740184 7.86289070700465 7.94277866754004 7.9967152349771 8.01167656344325 7.77609424236612 7.35658142573177 0.160809031880918 0.151886751610947 0.151886751610947 0.155173214887824 0.159256243029955 0.154624152398541 0.162749761480523 0.161981124009276 0.165438956667864 0.160695473304736 0.151886751610947 0.156122324531333 0.152547105224551 0.156643235494774 0.151886751610947 0.151886751610947 0.160322210077605 0.160206351249870 0.157861337830113 5 5|0 -|/ 3449141 3450046 3449620.667 3448637 3454232 - gene protein_coding_gene TRUE TRUE AT5G10940.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G45620.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94369.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.168534639213797 -1.51348634592551 0.159438537793168 1 1.09234918147894 15.1275334722659 -0.168534639213797 0.127078731624369 AT5G04940_at 5.96592222004918 6.39733048151941 7.81518823242861 7.63048277205278 8.2927073607256 8.28431084653427 7.37685713908612 7.35788970582864 5.7166844500339 6.38004424463838 7.19697048656546 7.26604732235072 7.44019510919033 7.25598865409521 7.04433790666366 6.98027419578561 7.50273930937675 7.26227081373474 6.29424877420063 0.202087849690839 0.203512980134841 0.204287123636175 0.198791043388614 0.203994266971148 0.198791043388614 0.203196957738618 0.202799857229687 0.218581884468688 0.200935823658789 0.201807084413668 0.198791043388614 0.203375607533097 0.211237458593488 0.198791043388614 0.203520080394954 0.198791043388614 0.206155401435322 0.211309748591906 5 5 - 1454619 1455190 1454916.182 1454168 1456991 - gene protein_coding_gene TRUE TRUE AT5G04940.1|AT5G04940.2 SUVH1 (SU(VAR)3-9 HOMOLOG 1) Encodes a SU(VAR)3-9 homolog, a SET domain protein. Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog protein 1) (Su(var)3-9 homolog protein 1) (Protein SET DOMAIN GROUP 32) (SUVH1) [Arabidopsis Thaliana] (GB:Q9FF80); similar to SUVH3 (SU(VAR)3-9 HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G73100.1); similar to SET-domain-containing protein [Nicotiana tabacum] (GB:CAC67503.1); similar to SRA-YDG; SET-related re (GB:ABE79848.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain Pre-SET; (InterPro:IPR007728) 0.141829287281402 1.51248912166048 0.159688554104603 1 1.09110585792092 14.0770504936170 0.141829287281402 0.081291396369823 AT5G60570_at 7.42956420258194 7.32266095997561 8.21744160481532 8.06449029375415 8.35692876182056 8.34844481881599 7.77293406023578 7.49669628559678 7.16555523399543 7.5613254127087 8.3705446839171 8.46700825960934 8.22239865158667 8.51447243176169 8.07542354376852 8.2156606206343 7.93821214261446 8.01217684761199 7.31858298127029 0.150624781632577 0.145771257346115 0.145771257346115 0.151190246059469 0.151947725635348 0.152584543840355 0.151488837569106 0.148198134686753 0.163927361339049 0.163238857231865 0.147448680313092 0.156161824434375 0.152590688658821 0.148208523881111 0.152899534047746 0.149039866378418 0.167103944335892 0.164161615542851 0.153393781234067 5 5 + 24366599 24366978 24366786.455 24365939 24367266 + gene protein_coding_gene TRUE TRUE AT5G60570.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G26930.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE79891.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.131442445784233 -1.51233437073172 0.159727382484272 1 1.09091296202389 15.6638826352893 -0.131442445784233 0.0577083963824968 AT5G25415_at 1.24690642717594 1.50166347811173 1.74734345660454 1.94279265895121 1.66434282821944 1.63207232141350 1.34576250021391 1.70086792362275 1.91271716427466 1.96974064149184 1.50093428798298 1.29786990160505 1.73045856371518 1.41051072204005 1.59186147556209 1.53488063028298 1.35132704604762 1.86382618821028 1.74784384609255 0.206509630015873 0.198364170244529 0.200920820768587 0.208503976207703 0.196800812251412 0.207367009013895 0.195450190484653 0.210424394614460 0.203407102866571 0.196963183989768 0.199110124470881 0.199768506822525 0.20539072466974 0.197602304482437 0.205854091018026 0.202022891349063 0.200905141491424 0.195450190484653 0.196320062826404 5 5 + 8836376 8837154 8836831.273 8834209 8837179 + gene protein_coding_gene TRUE TRUE AT5G25415.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25410.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE81979.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE78898.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.142673778579620 -1.51219413264236 0.159762576528356 1 1.09073816675204 3.30370685889769 -0.142673778579620 0.0830378948382148 AT5G12000_at 2.34762941154166 1.89158580803335 2.11320742871989 2.45855169570684 2.15514752261672 2.07730163287973 2.17659120198798 2.16598115903254 2.457480609282 2.18260963758122 2.39666853916101 2.51896874913274 2.55317748546730 2.47950761353003 2.41826242448844 2.48642576569834 2.36079529881921 2.82280838334702 2.55544156654063 0.203573196087871 0.206880119310362 0.199904695479673 0.201970490319655 0.204653136436967 0.201705949151538 0.204694582618559 0.199767406666470 0.203062447616004 0.200929532608750 0.198160364080490 0.204274284821576 0.206683898529974 0.206785772997763 0.20781015257266 0.199435888080110 0.215374610011177 0.201297300349026 0.202660424083754 5 5 - 3874275 3874802 3874580.909 3873907 3876913 - gene protein_coding_gene TRUE TRUE AT5G12000.1 kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G26150.1); similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G31230.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79207.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79205.1); similar to serine threonine kinase 1 [Zea mays] (GB:AAK73111.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.151685357775181 -1.51159263087987 0.159913605163316 1 1.08998855718789 4.62479317602657 -0.151685357775181 0.0999247939327854 AT5G38195_at 1.07750443912123 0.877317099000716 1.51448961402583 1.32622342851448 0.65238250367975 1.38478599889771 1.11856306552588 1.03884929110281 1.5010887538455 1.58716251162998 0.793799913428722 1.20207791685722 1.43277266361444 0.738454437075805 1.33046698315919 1.04645268598346 1.39590723032025 1.00701412527388 1.40757419644650 0.208133998874036 0.202292326955310 0.213403378623780 0.210353604568773 0.201937527366149 0.213722203695160 0.21051654744069 0.208311703911766 0.206130197627759 0.208185283757137 0.203078923664809 0.201937527366149 0.206065924548942 0.212097028319730 0.203684727103176 0.202399726506275 0.207083695920458 0.213408184451207 0.20212019536503 5 5 + 15264256 15264483 15264368.2 15264140 15264559 + gene protein_coding_gene TRUE TRUE AT5G38195.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38180.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38197.1); similar to seed specific protein Bn15D80B [Brassica napus] (GB:AAP37973.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.174189259084370 -1.51069751641139 0.160138584769212 1 1.08887337821031 2.43225279586927 -0.174189259084370 0.136075149408231 AT5G53180_at 8.3689657161032 8.24665176566392 8.81121748530058 8.60799428195573 9.17637936857298 9.00951886180624 8.15260614705326 8.02696160510283 7.95102345995031 8.16742294852802 8.95040033091673 8.95037387450083 8.7781353053537 8.92800784195418 8.7179118270058 9.0688444682016 8.6956057170785 8.60692236270249 8.24035455763873 0.120894599711545 0.119744318570459 0.125751104815152 0.121680760806275 0.121390908620543 0.119123230409308 0.119871308577808 0.124159591421512 0.130957179603519 0.123165503045179 0.124940202741984 0.117165868667745 0.122254545901237 0.120576289376957 0.12157847646249 0.117833154258315 0.124291189064699 0.123597763593652 0.12043864647218 5 5|0 -|/ 21585620 21586331 21585834.8 21585426 21589128 - gene protein_coding_gene TRUE TRUE AT5G53180.1|AT5G53180.2 polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative Identical to Polypyrimidine tract-binding protein homolog 2 [Arabidopsis Thaliana] (GB:Q9FGL9); similar to PTB (POLYPYRIMIDINE TRACT-BINDING), RNA binding [Arabidopsis thaliana] (TAIR:AT3G01150.1); similar to polypyrimidine tract-binding protein-like [Solanum tuberosum] (GB:ABB55397.1); similar to Os03g0376900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050223.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|Identical to Polypyrimidine tract-binding protein homolog 2 [Arabidopsis Thaliana] (GB:Q9FGL9); similar to PTB (POLYPYRIMIDINE TRACT-BINDING), RNA binding [Arabidopsis thaliana] (TAIR:AT3G01150.1); similar to Os08g0436000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061885.1); similar to RNA-binding re (GB:ABE82469.1); similar to Os03g0376900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050223.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) -0.129817780984436 -1.50646671910727 0.161205673546555 1 1.08360794335061 17.0283496729465 -0.129817780984436 0.0546944056029824 AT5G57040_at 10.8066304731860 10.8916502331379 11.773701770228 11.8258772509511 11.8230008969627 11.7900727958417 11.7049976540387 11.6151378812570 11.0690354590213 11.5018830478568 12.2402656935571 11.9110258551973 12.0949509069943 12.1740250424705 11.8185933424712 12.3080501496289 12.2580682139830 12.1033128107908 11.5099023593337 0.0751132540530899 0.0696062888239016 0.072352899433046 0.0703512837940458 0.0708431292824137 0.0715520623838924 0.0725142987324648 0.069811648663315 0.084264357083356 0.0697887476471601 0.0719462079923135 0.0707086610627615 0.0706579944684766 0.0752062300608207 0.0719090704440698 0.0697744011263057 0.0762050912161802 0.0718005066693678 0.0708691462775667 5 5 - 23101264 23102318 23101617 23101126 23102472 - gene protein_coding_gene TRUE TRUE AT5G57040.1 lactoylglutathione lyase family protein / glyoxalase I family protein similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT1G80160.1); similar to Os07g0160400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058939.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC79640.1); contains InterPro domain Glyoxalase/extradiol ring-cleavage dioxygenase; (InterPro:IPR011588); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase; (InterPro:IPR004360) 0.121512329487699 1.50586052811485 0.161359069518319 1 1.08285425481296 23.265788681429 0.121512329487699 0.0239226895139956 AT5G37690_at 2.11370283454291 1.98981585963961 2.36026728282713 2.33042660281559 1.74308052574935 2.14690979432726 1.88863102684853 2.47998079178679 2.12038135185986 2.38170696721360 2.09192490683541 2.16098282804928 1.93912887544333 2.10036534860917 2.10176045133399 2.38471316635051 2.83587252113208 2.17578510278569 2.050294473554 0.216002318077786 0.216957769961717 0.219930760377061 0.215789361399340 0.216146685890125 0.219326401589411 0.217862889966158 0.227566330612145 0.229321373872168 0.217389308369916 0.221487903275665 0.219573241619629 0.220145185598276 0.219986867461683 0.217997745371911 0.215789361399340 0.229079995546942 0.246444271519847 0.223342476279713 5 5|0 -|/ 14990894 14991331 14991082.7 14990583 14993399 - gene protein_coding_gene TRUE TRUE AT5G37690.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G74460.1); similar to Os06g0257600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057321.1); similar to GDSL-motif lipase/hydrolase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD16143.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.166826337246148 -1.50518797946157 0.161529404978923 1 1.08201828171733 4.33557396362210 -0.166826337246148 0.125868103511735 AT5G50390_at 2.61269645343463 2.50113529656045 2.90954234928514 2.69565684813118 2.87409581090662 2.66259192760566 2.96991727802430 3.27424211548324 2.68694964379747 2.57805726118055 3.58607205769183 3.61697126857635 3.1721567389203 3.15602200428964 3.2100182095734 2.92150245063020 3.01109469508 3.15506293478712 2.73108071910207 0.178024685638618 0.174453821615147 0.183557876009277 0.184999993869404 0.179191896905240 0.184220494613473 0.182317421448754 0.175917292509988 0.184512546166162 0.179421553005554 0.177266530498105 0.178763475720818 0.179253529362007 0.179292614619613 0.174453821615147 0.179470179753588 0.195378335989356 0.175120616609978 0.174453821615147 5 5 - 20538061 20538621 20538339.818 20538015 20540206 - gene protein_coding_gene TRUE TRUE AT5G50390.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G23330.1); similar to Os08g0138600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060961.1); similar to vegetative storage protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87043.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.138830533726753 -1.50504783255694 0.161564919366870 1 1.08184410916894 5.75947230308072 -0.138830533726753 0.0765246859805335 AT5G14690_at 1.75876143217733 1.63152077076303 1.63751300236449 1.75967260523103 1.55349061616244 1.62556607974633 2.18470071378409 1.81916333534624 2.37177010365851 1.50762993373153 2.01177917039691 2.14415492060732 2.22862586918951 2.23067946292607 2.03287475276147 2.07499132531654 2.09125703785208 2.37221611842935 1.85818947710772 0.191218140004799 0.193261130504927 0.191909707888230 0.190578655587064 0.188179710368275 0.190141183874596 0.188179710368275 0.191098882672416 0.194401544595062 0.194914746879856 0.188179710368275 0.189002338315731 0.188179710368275 0.196649958614803 0.195653555059231 0.195452182155657 0.199104923466041 0.199712691137014 0.199175213460625 5 5 - 4733870 4734383 4734233.091 4733765 4734550 - gene protein_coding_gene TRUE TRUE AT5G14690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01516.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68585.1) -0.136389368454232 -1.50444299708932 0.161718267172431 1 1.08109254331369 3.77672465462229 -0.136389368454232 0.0713366509411649 AT5G35280_at 1.74063602272876 1.54723723018219 1.79028267475111 1.91632485922395 1.61097253860331 1.95126246297802 1.69932620367408 1.55034300257548 1.88388710623194 2.21596652447029 1.53435312737812 1.85882921332681 2.16051069730426 1.76336760113870 1.63500151625617 1.50309046317834 2.21124456839118 1.83871691356598 1.86566166561538 0.140547284359992 0.137668476275022 0.136699655800379 0.137446560344653 0.137880599462384 0.138140496623276 0.138953333505901 0.142617771943782 0.138189980628234 0.137543507299273 0.141170582256534 0.140960304936488 0.141451827695423 0.138445564235412 0.137588330491213 0.136699655800379 0.137635890954921 0.13761822165466 0.142803404018849 5 0|5 /|+ 13527411 13527664 13527621.625 13526852 13527760 + gene protein_coding_gene TRUE TRUE AT5G35280.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G07310.1); similar to hypothetical protein 31.t00082 [Brassica oleracea] (GB:ABD65101.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Protein of unknown function DUF223, Arabidopsis thaliana; (InterPro:IPR003871); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.138049333873967 -1.50083593846552 0.162635403777851 1 1.07661430858887 3.6266203050096 -0.138049333873967 0.0756870260230727 AT5G35090_at 1.12846084758977 1.34668135251401 1.14075339593235 1.38138990279804 0.949345316755982 0.888581350317261 0.890713124245673 0.814021414786857 1.23417029352671 1.17883180612366 1.05664218151598 0.698277357742564 1.30780535605157 0.943493870244648 1.15064766177713 1.05525646207461 1.21091897921374 0.800403868601716 1.16278346412502 0.200561958629855 0.205614786040434 0.202218674217058 0.212195323664524 0.201547587639841 0.200561958629855 0.201438295505202 0.205453076259477 0.210946246096154 0.210775139254933 0.202716409576071 0.202242596998438 0.203650703714303 0.202677721894383 0.202871223038056 0.202194599662506 0.210188201432947 0.205973148638361 0.223011668796946 5 5 + 13375812 13376201 13375988.727 13375644 13376318 + gene protein_coding_gene TRUE TRUE AT5G35090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11070.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80958.1) -0.130670480747169 -1.49907951155724 0.163083620828164 1 1.07443608034802 2.17742295732310 -0.130670480747169 0.0587112004840403 AT5G46040_at 0.755397737291385 1.08393094384353 0.769205487684031 0.918341318361092 1.06031683279878 0.878630647160087 0.667764175563008 0.812154238291956 0.414802135817465 0.825401800032538 1.08597234371933 1.10564432650813 1.11886977747269 0.968037930428245 0.640748031575086 0.330347223615929 1.32953532541778 0.539854183503853 0.499213476615076 0.214362188206770 0.211947677317577 0.214844348939523 0.215067006364416 0.208682699135952 0.209854773875760 0.206527549961657 0.206527549961657 0.222706340658761 0.221434285576523 0.214388167171659 0.210085113436497 0.209843962642646 0.210801421709732 0.215432700852612 0.214949335616101 0.212568212593558 0.219979086892667 0.217071145052173 5 5 - 18688723 18689192 18688975.273 18688624 18690778 - gene protein_coding_gene TRUE TRUE AT5G46040.1 proton-dependent oligopeptide transport (POT) family protein similar to ATPTR3/PTR3 (PEPTIDE TRANSPORTER PROTEIN 3), transporter [Arabidopsis thaliana] (TAIR:AT5G46050.1); similar to putative nitrate transporter NRT1-3 [Glycine max] (GB:BAB19758.1); similar to Os10g0470700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064823.1); similar to putative peptide transport protein [Oryza sativa] (GB:AAG21898.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.137029055916829 1.49702219099367 0.16360997855063 1 1.07188671196744 1.60305864609181 0.137029055916829 0.074239023577682 AT5G04980_at 5.98245887364045 5.85459340261275 7.39829559539269 6.93109367597551 8.06921886963269 7.4720123902815 7.56480215446904 6.94933724013614 4.79953624385994 5.26530757064686 5.95256794648038 5.4600532233822 6.23392514252879 6.1550654459986 5.07153198265125 6.30848361313432 7.03643593255275 5.94511857564233 5.5475599122495 0.274838656654038 0.265197177469126 0.271078374590182 0.280574388741783 0.265781398297692 0.267304936854135 0.268328535282714 0.264909030926164 0.270197745821463 0.268996161933248 0.270634030941652 0.265483261169385 0.262369449333057 0.276510991062812 0.269392064536012 0.264466159511895 0.270300170793159 0.2704167299526 0.269858040010138 5 5|0 -|/ 1468682 1469419 1469070.222 1468576 1470773 - gene protein_coding_gene TRUE TRUE AT5G04980.1|AT5G04980.2 endonuclease/exonuclease/phosphatase family protein similar to BST1 (BRISTLED1), hydrolase [Arabidopsis thaliana] (TAIR:AT5G65090.1); similar to putative inositol-1, 4, 5-trisphosphate 5-phosphatase [Oryza sativa (japonica cultivar-group)] (GB:BAB90404.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135)|similar to BST1 (BRISTLED1), hydrolase [Arabidopsis thaliana] (TAIR:AT5G65090.1); similar to Os05g0489000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055889.1); similar to putative inositol-1, 4, 5-trisphosphate 5-phosphatase [Oryza sativa (japonica cultivar-group)] (GB:BAB90404.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) -0.196765923416012 -1.49694416379208 0.163629970358118 1 1.07179006584338 12.6399926794585 -0.196765923416012 0.170446092844553 AT5G29050_at 0.975351688672418 1.39589350139050 1.01703834932179 1.22406168632077 0.561136555799648 0.980231575717743 1.08459185447391 1.13185834902749 1.34909114108788 0.89488793013667 1.4156164862879 1.18785755215083 1.29315072878734 1.39340543455137 1.06416590792288 1.26643020038854 1.17479161812440 1.35454367205835 1.44146664960068 0.231882199702481 0.229414382846399 0.231806096045712 0.230895617048715 0.227578885390196 0.226359143684776 0.226359143684776 0.226689808753874 0.24432372100855 0.226359143684776 0.228312445273850 0.232750176341312 0.235754552317915 0.226991293614179 0.226359143684776 0.226359143684776 0.230336423059567 0.24539953707378 0.226359143684776 5 5|0 +|/ 11111709 11112223 11111972.444 11111696 11112287 + gene protein_coding_gene TRUE TRUE AT5G29050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G11015.1) -0.155525246677478 -1.49679730314807 0.163667604107181 1 1.07160816966473 2.29488399857838 -0.155525246677478 0.109119005283989 AT5G60770_at 0.598656616265674 0.482028030976867 1.05476202970049 0.849079926667222 0.82679762853351 0.694421861165368 0.809784489609504 0.826562432959523 0.690199380060945 0.338504393258318 0.511372316862257 0.59335582861741 1.25013283715356 0.710359976009152 0.476350990859214 0.700629078279678 0.91388374145507 0.783570209679867 0.654703894320099 0.178495068433487 0.181646485902786 0.175330494668497 0.175330494668497 0.186338547928467 0.175870365226796 0.17927231150109 0.187772370132780 0.180797537144728 0.189010899738215 0.179534141403301 0.177504468608426 0.180364518566641 0.183318474756412 0.177237631109043 0.180916277303417 0.183869676310993 0.179058355972412 0.175993455903093 5 5 + 24463656 24464191 24463867.364 24461622 24464252 + gene protein_coding_gene TRUE TRUE AT5G60770.1 ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4); nitrate transporter member of High affinity nitrate transporter family similar to ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3), nitrate transporter [Arabidopsis thaliana] (TAIR:AT5G60780.1); similar to ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1), nitrate transporter [Arabidopsis thaliana] (TAIR:AT1G08090.1); similar to ATNRT2.2 (Arabidopsis thaliana high-affinity nitrate transporter 2.2), nitrate transporter [Arabidopsis thaliana] (TAIR:AT1G08100.1); similar to high-affinity nitrate transporter [Brassica napus] (GB:CAC05338.1); similar to high-affinity nitrate transporter [Prunus persica] (GB:BAD04063.1); similar to high-affinity nitrate transporter [Prunus persica] (GB:BAD02939.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.126057874301783 1.4929295289282 0.164661433065341 1 1.06682168239539 1.41955800777359 0.126057874301783 0.0469843245195991 AT5G43190_at 7.08287200248856 7.64428513445006 7.83776084088802 8.31707222200402 8.14983784965155 7.96125771415038 6.34345770851828 7.23279192502573 7.26313632243748 7.54604341500949 8.50520830109699 7.8814922173205 8.18318927802691 8.19129801318923 6.99604193636649 7.8783786016943 7.7514894771355 7.77929124235634 7.36199459827216 0.225737257517909 0.217017922795820 0.222161191327634 0.218841261875122 0.219455387003562 0.245575676787031 0.213262469633301 0.211658144237032 0.233903285491434 0.225187146103419 0.224008998215839 0.21289518893165 0.218554871078264 0.230828856047706 0.214109811640677 0.21072430673352 0.230413026662715 0.22144872764504 0.218063336122805 5 5 - 17357528 17358101 17357835.273 17357366 17358797 - gene protein_coding_gene TRUE TRUE AT5G43190.1 F-box family protein (FBX6) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G15710.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96837.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) -0.22044525939756 -1.49231169423423 0.164820667736512 1 1.06605780742419 15.2142619639661 -0.22044525939756 0.202658901717882 AT5G14600_at 1.51312445039981 2.38123546052986 2.11603412499394 2.55219816627877 2.88251695351309 2.64384419412566 2.37266113926706 2.53569117507815 1.90652508017567 1.63840790803920 2.46525213329412 2.33793212855322 2.35011729180644 2.51801697971155 2.31761964211600 2.36094159620599 1.86621727314793 2.13031782106937 1.91722961735959 0.204865180343771 0.191613129540584 0.194415664247807 0.193181777363302 0.191456330847716 0.199596721260528 0.191456330847716 0.196478517618837 0.194403212323281 0.196338626396840 0.195585012767828 0.193556159864414 0.192145698501948 0.196341717996493 0.191968165170947 0.193786641767632 0.197519164358666 0.191456330847716 0.19725175216612 5 5|0 +|/ 4707901 4708972 4708441.8 4706948 4709146 + gene protein_coding_gene TRUE TRUE AT5G14600.1 similar to OSJNBb0033P05.9 [Oryza sativa (japonica cultivar-group)] (GB:CAE05670.3); similar to PREDICTED: similar to MGC53312 protein [Gallus gallus] (GB:XP_421386.2); similar to OSJNBb0026L04.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE01500.2); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051) 0.199733313439726 1.49176264963193 0.164962284568357 1 1.06537914809847 4.43167457140474 0.199733313439726 0.175409429293702 AT5G20850_at 1.79548507567926 1.83558336398386 1.92294549520290 2.15198195046474 1.32731263556359 1.71257913622406 1.21185532450521 1.51214564153717 2.35245051945160 2.02608775820607 2.14654581645627 2.18443031195128 1.96579209513069 2.12645712724115 2.02679677662769 1.94357345052118 1.88878763327572 1.65325766138849 2.13646805306605 0.253872014971862 0.252558738967066 0.251393883938478 0.252087191515241 0.248381433032666 0.246877826706330 0.251117915067487 0.24799680779779 0.252653056211141 0.257580034530263 0.253843704533718 0.245432884716433 0.248586785438303 0.258545313940283 0.251408609459668 0.245432884716433 0.25512604972354 0.247651477994631 0.245873471213121 5 5|0 -|/ 7070815 7071621 7071214.1 7070588 7072953 - gene protein_coding_gene TRUE TRUE AT5G20850.1 ATRAD51 (Arabidopsis thaliana Ras Associated with Diabetes protein 51); damaged DNA binding Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation. Identical to DNA repair protein RAD51 homolog 1 (Rad51-like protein 1) (AtRAD51) (RAD51) [Arabidopsis Thaliana] (GB:P94102); similar to ATDMC1 (RECA-LIKE GENE), ATP binding / DNA-dependent ATPase/ damaged DNA binding [Arabidopsis thaliana] (TAIR:AT3G22880.1); similar to RAD51 homolog [Populus nigra] (GB:BAF02935.1); contains InterPro domain Rad51, C-terminal; (InterPro:IPR013632); contains InterPro domain DNA repair protein RAD51; (InterPro:IPR011941); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Rad51, N-terminal; (InterPro:IPR010995); contains InterPro domain RecA bacterial DNA recombination; (InterPro:IPR001553) -0.146156920859641 -1.49104946134691 0.165146396189195 1 1.06449782762035 3.76554802088608 -0.146156920859641 0.093620833218071 AT5G50780_at 4.30661511974135 3.98674822891774 5.26395425440906 5.1337449459603 5.61711324383098 6.15241309385223 3.46851869895197 3.96154498478559 4.10798036813317 4.46624466971567 4.86475396498387 4.78887200441066 5.03681005170764 4.52436822054524 4.34072398415519 5.2620195536933 5.31811973051701 5.49671910615412 4.76655558644042 0.242062592265714 0.241255154185611 0.251587694690382 0.235790890132204 0.239473340964917 0.236448742771866 0.248564654508587 0.240944912816597 0.252602191374957 0.244884585624051 0.24517726448315 0.247175592964492 0.237950258563275 0.240603662942897 0.255237605742271 0.242855747490741 0.242372944334113 0.238658920761188 0.236441449576543 5 5|0 +|/ 20671380 20672037 20671665.3 20667495 20672106 + gene protein_coding_gene TRUE TRUE AT5G50780.1 ATP-binding region, ATPase-like domain-containing protein similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24970.1); similar to Os02g0469300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046827.1); similar to OSIGBa0148D14.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66201.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK70637.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) 0.174143712657593 1.49100010784926 0.165159143490428 1 1.06443684889227 9.43681917219813 0.174143712657593 0.139401964953073 AT5G50100_at 8.10892181573913 8.09057390787613 9.39372532431505 9.06293470799742 9.55402064305566 8.66430485200095 10.2733777736966 9.81383048488216 8.36321275426329 8.70761077429197 9.59121437694706 9.48610474818673 9.58166060415792 9.6104215925338 9.16127891186463 9.72347369969564 9.44642213385127 9.51266674274411 8.39308108681652 0.167195902664787 0.157853908890743 0.150754151580764 0.155771144089489 0.150836601801757 0.157172589534771 0.160724276482422 0.159641148656871 0.168905076453704 0.155556112516835 0.150754151580764 0.150754151580764 0.153675727313703 0.164157840266405 0.152014778223793 0.150754151580764 0.153042437006706 0.159929901331451 0.157456051733087 5 5|0 +|/ 20389189 20390231 20389597.778 20389079 20390667 + gene protein_coding_gene TRUE TRUE AT5G50100.1 similar to PBng143 [Vigna radiata] (GB:BAB82450.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Putative thiol-disulphide oxidoreductase DCC; (InterPro:IPR007263) -0.204874649857794 -1.49061293921872 0.165259173037909 1 1.06395852625593 18.1212729668812 -0.204874649857794 0.182532640034715 AT5G15380_at 1.61602755191122 2.15841489599236 1.70629623546245 1.85705500930441 2.01328890341111 1.94462713952133 1.73075752149636 1.76498153183236 1.94762812168047 1.86268369614278 1.60988146737620 1.72311497308573 2.19732473992205 2.06800505578469 2.10758685158103 1.83827008676490 2.18993703177265 2.55339733717171 2.41062783747107 0.247233578887286 0.245264978162315 0.249128615757213 0.240726736275669 0.236638813817457 0.241506775438979 0.244626356598839 0.243365201160406 0.242903458322622 0.236870394100561 0.244247189137559 0.239074860668569 0.247036932865781 0.237336166651589 0.241737863170745 0.235928154731532 0.241781640100433 0.244364121939208 0.235928154731532 5 5 + 4994199 4994786 4994508.545 4991350 4994829 + gene protein_coding_gene TRUE TRUE AT5G15380.1 DRM1 (DOMAINS REARRANGED METHYLASE 1) Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences. similar to DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT5G14620.1); similar to DNA methyltransferase [Nicotiana tabacum] (GB:BAC67060.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) -0.148680403146910 -1.49056700356719 0.165271044517008 1 1.06390178077254 3.90372422096502 -0.148680403146910 0.098321545933126 AT5G10380_at 11.5174202049743 11.808645855642 12.6008520324755 12.7534655956486 12.4622503594320 12.4289758264548 10.7448925079780 11.0192071090172 11.4899480417352 10.7017348539609 10.9597457784775 10.4704800326604 11.3029917441070 11.1546214681774 10.3196445637139 11.1508089350089 11.1465046662392 10.9824645714907 10.3814343153630 0.131211950727537 0.124289442341834 0.130154658376602 0.126133160509787 0.132919037534082 0.126209095101613 0.123831278710119 0.124210858168448 0.125666887829519 0.124729834492133 0.124131490126596 0.126085392997942 0.121915991693856 0.118786379097483 0.127860426225294 0.123638314593505 0.131139944699073 0.123708862413548 0.127072087840262 5 5 + 3268156 3268696 3268393.909 3267636 3268814 + gene protein_coding_gene TRUE TRUE AT5G10380.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5F (ATL5F) [Arabidopsis Thaliana] (GB:Q9LX93); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G72220.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE93076.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.136467668976804 1.49046115949281 0.165298401357577 1 1.06377103303740 22.8137704149548 0.136467668976804 0.0743247064342926 AT5G59660_at 2.68169391790457 2.03584112481184 2.21200185338720 2.43118912670063 2.96303840244174 2.36285479160916 2.61660958888217 2.07780006549806 2.52059650551658 2.24140081961611 2.02907588920722 2.17341350583677 2.56701715939325 2.43557639852330 2.36359095809347 2.48759333569838 3.02797116621926 2.95898666323960 2.77921614293608 0.221236185179678 0.221003751966433 0.220528687246395 0.217846900265455 0.219909777615757 0.225906513068394 0.221652619073655 0.222009375775049 0.223522850724620 0.21683613060904 0.235439977911576 0.218352818049575 0.220664733264238 0.223257259349577 0.227202959996244 0.225319620593984 0.217153980431450 0.219975091308931 0.219471793660437 5 0|5 /|+ 24056481 24057164 24056864.7 24052913 24057205 + gene protein_coding_gene TRUE TRUE AT5G59660.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59680.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59650.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59670.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.204719916764886 -1.48807515536809 0.165916133304904 1 1.06082517299315 4.93219908751242 -0.204719916764886 0.182792338943788 AT5G38880_at 5.10291503159958 5.16814679318879 5.33851560558685 5.59008282794397 6.65181377041538 5.92149529798938 5.38335365828133 5.06215351743428 5.77082181966276 4.91820799527344 6.29604944558318 6.69128790070925 6.14825962252635 6.66804125357033 6.64281569020724 6.56886569741848 4.96745993511381 6.36482769472531 5.3442817269719 0.22973489570375 0.211512592032004 0.221245174352105 0.225996680354429 0.218015455365317 0.22548877688511 0.218320234614574 0.214414458497839 0.217490345001772 0.214765755813629 0.211512592032004 0.211612510488768 0.219631414354393 0.217557578988080 0.222465862327933 0.211512592032004 0.236428052951941 0.212122760726980 0.214256478232582 5 5|0 -|/ 15580873 15582440 15581877.1 15580536 15586424 - gene protein_coding_gene TRUE TRUE AT5G38880.1 similar to At5g38880 [Medicago truncatula] (GB:ABE87802.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABD33348.1) -0.177648746619374 -1.48733075572307 0.166109263691670 1 1.05990670966058 11.3462536056138 -0.177648746619374 0.145208832151016 AT5G04850_at 7.28061135639683 7.57281534917182 8.7975198947031 8.60762647838314 9.08093176179624 8.6413849605505 7.61749249267616 7.90730503951619 6.94503594735086 7.23688827686966 8.1095511560462 7.92374995805381 8.5298179887226 8.27285497916262 7.59117372407759 8.38303033158929 8.18033532332752 7.95465359341336 7.22145192398665 0.141231611241413 0.139023491585086 0.143564149410862 0.148013421810083 0.140568636710947 0.134784388829214 0.138413686378170 0.142232367113683 0.166370057078093 0.136929509785595 0.138387193391976 0.135215335662 0.135107746554047 0.139177509070734 0.139670623459471 0.137842591728074 0.150479526921746 0.140564019496055 0.138313444907056 5 5|0 -|/ 1408265 1409391 1408732.5 1408063 1409893 - gene protein_coding_gene TRUE TRUE AT5G04850.1 SNF7 family protein similar to SNF7 family protein [Arabidopsis thaliana] (TAIR:AT3G10640.1); similar to putative CGI-34 protein [Oryza sativa (japonica cultivar-group)] (GB:BAB16321.1); similar to Os05g0102900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054389.1); contains InterPro domain Snf7; (InterPro:IPR005024) 0.154582561863845 1.48690907882286 0.166218751355900 1 1.05938655912040 15.8145132155833 0.154582561863845 0.109262524740751 AT5G04530_at 2.02967122343539 1.73561792373241 1.24085348264676 1.13673463418059 1.22359143376204 1.00365092528312 1.28812011363597 1.38738679097614 1.23984971678005 1.52183561402698 1.61942834464065 2.94971735036155 2.31504167813576 1.28085201723555 2.42866631940559 1.60248841424520 1.86813115905381 2.49179760148382 2.16750121883502 0.191382538599933 0.192944147278947 0.187976958730272 0.189188734193560 0.190530909927319 0.197375492146369 0.190971531032708 0.189707969672226 0.196002845391377 0.196704332394128 0.193377680211837 0.204913703350469 0.188395843789403 0.192855219893858 0.198314940831485 0.197105379286054 0.191042887134434 0.189395692841108 0.188262362255484 5 5 - 1292227 1292782 1292552.455 1291823 1293689 - gene protein_coding_gene TRUE TRUE AT5G04530.1 beta-ketoacyl-CoA synthase family protein Identical to 3-ketoacyl-CoA synthase 21 (EC 2.3.1.-) (KCS-21) (Very-long-chain fatty acid condensing enzyme 21) (VLCFA condensing enzyme 21) (KCS21) [Arabidopsis Thaliana] (GB:Q9LZ72); similar to beta-ketoacyl-CoA synthase family protein [Arabidopsis thaliana] (TAIR:AT2G28630.1); similar to Chalcone and stilbene synthases, N-terminal [Medicago truncatula] (GB:ABE80003.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) -0.133337045424767 -1.48557168538997 0.166566414577815 1 1.05773745637915 3.23699208784868 -0.133337045424767 0.0682493408274987 AT5G39710_at 4.20482517572525 4.44046767609419 5.61615499457692 6.17708138593375 5.12697068379306 4.65088923712738 5.30663139716766 5.76028392803064 2.91487437430122 3.76030798470828 4.73713186878744 5.66412728211322 5.50544311591602 5.28033822471153 4.79637360017369 6.12634319535442 5.38456615334828 5.39863620697569 4.27752059363419 0.269272739312054 0.257500071668603 0.260130789105356 0.260653187395237 0.258201362593108 0.263807115872200 0.259767718016711 0.263267150503697 0.27652273729241 0.260671100102765 0.267951018382865 0.261170816812108 0.256482202421529 0.260594836392297 0.257683757447333 0.256946158880717 0.274110758078322 0.264014996045295 0.261811907533708 5 5 + 15914616 15915174 15914875.091 15912957 15915200 + gene protein_coding_gene TRUE TRUE AT5G39710.1 EMB2745 (EMBRYO DEFECTIVE 2745); binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G55840.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); similar to Os06g0152500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056837.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.184216380940707 1.48533101380624 0.166629045011093 1 1.05744078952613 9.66667352987466 0.184216380940707 0.155038046589424 AT5G43930_at 6.90248905561991 6.59841193165122 7.79634286188522 7.92912310464992 8.61287788037277 8.03813090907197 6.4448722302148 6.10037119921501 6.48329546635429 5.57601864685137 6.8157708658178 6.72204715934822 7.02148708006812 7.20399908707875 6.46272774285252 7.22345379166353 7.10975985296024 7.05316279508905 6.32413686452935 0.193089287096159 0.188121901501461 0.186234168277817 0.184868577131156 0.189744607215938 0.188822857664338 0.195544830050472 0.198563983308067 0.190248736272625 0.194395721540059 0.191023022268568 0.183922942067742 0.182392541248136 0.189835268265350 0.193443821890051 0.184832712138893 0.198401228581888 0.194613771913273 0.185864831255624 5 5 + 17696734 17697769 17697173.182 17694050 17698327 + gene protein_coding_gene TRUE TRUE AT5G43930.1|AT5G43930.2|AT5G43930.3 transducin family protein / WD-40 repeat family protein|nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G04140.2); similar to Os02g0290300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046589.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71197.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 0.166869243372213 1.48511828276738 0.166684421307321 1 1.05717858899137 13.8425114163042 0.166869243372213 0.12939913334738 AT5G20040_at 4.67792974196156 4.95156701265371 5.5404201323964 5.80442170454347 6.07740718384453 5.61337580812604 5.0001621601628 5.17201467717784 4.26381721173768 5.00891229847081 5.29858201471184 5.60249836647885 5.56091692847617 5.45909557266978 6.00230807070971 5.32144455388157 5.30689652874284 5.59606483482741 4.890849206355 0.202347257212986 0.196379514456313 0.20560996956586 0.196379514456313 0.204443734755384 0.206717957683959 0.198270511620038 0.198190605653081 0.227425797361653 0.196751740544308 0.207824078330942 0.196379514456313 0.201230777288991 0.203175138246678 0.196927505348122 0.200509962001844 0.21124837305335 0.201519102398565 0.197032588367069 5 5|0 -|/ 6768005 6769498 6768901.125 6767799 6771172 - gene protein_coding_gene TRUE TRUE AT5G20040.1|AT5G20040.2 ATIPT9 (Arabidopsis thaliana isopentenyltransferase 9); ATP binding / tRNA isopentenyltransferase Encodes tRNA isopentenyltransferase AtIPT9. similar to ATIPT1 (ISOPENTENYLTRANSFERASE 1), adenylate dimethylallyltransferase [Arabidopsis thaliana] (TAIR:AT1G68460.1); similar to prokaryotic tRNA isopentenyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAE47453.1); similar to Os06g0729800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058651.1); similar to putative tRNA isopentenyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD62118.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) -0.153621684253285 -1.48484072732204 0.166756695957866 1 1.05683652482810 10.4744966847750 -0.153621684253285 0.10799395719412 AT5G28500_at 9.26285807942072 9.6358975697701 9.5904151864882 9.83132264744146 10.0947356885750 9.8174045015693 9.53705394208951 9.67688618527287 9.52663479751415 9.90701360075204 10.5482411183272 10.6407650765877 10.3055646670582 10.2749511916603 10.5345669571202 10.6587702625294 10.3192715297866 10.2308226862470 9.60363054090253 0.110114691129572 0.109015486890548 0.116692895606551 0.110929439098787 0.107519315631772 0.108148474973562 0.113575708296239 0.108259826060189 0.127946891474386 0.105920526796407 0.114020779910134 0.106129150084888 0.108147666350551 0.110959977341912 0.106946468412802 0.106479375021844 0.107846300624718 0.108385783469338 0.108979758640266 5 5 + 10478617 10479051 10478815.545 10477775 10479388 + gene protein_coding_gene TRUE TRUE AT5G28500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04550.1); similar to Os10g0445600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064712.1); similar to hypothetical protein Npun02004305 [Nostoc punctiforme PCC 73102] (GB:ZP_00109308.1) -0.14561053574201 -1.48460941448217 0.16681694978024 1 1.05655148144620 19.7399278080221 -0.14561053574201 0.0937791046580861 AT5G27970_at 6.35817954320942 6.23522888684223 7.0162589321273 6.66568216718682 7.04402801428382 6.39532122736545 6.13906777139562 5.69092563624383 5.882870885183 5.94611929167661 6.8401857236001 7.19240406676597 7.0061795702779 6.96573678741988 7.07982412221356 6.91097259286588 6.61308733054842 6.5023382140835 5.67218039274754 0.201913210992973 0.200721283853699 0.201893747608419 0.196236827571448 0.209810304922488 0.210096891916601 0.205901632862247 0.20683108936414 0.212816630999976 0.202503173730087 0.196878684484686 0.196236827571448 0.202269887749419 0.208461114374243 0.201724869953738 0.197973376103703 0.20134961197916 0.208941320724009 0.204005885149054 5 5|0 +|/ 10014266 10015201 10014799.889 10004724 10015672 + gene protein_coding_gene TRUE TRUE AT5G27970.1 binding similar to ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7), guanyl-nucleotide exchange factor/ protein binding [Arabidopsis thaliana] (TAIR:AT3G43300.1); similar to Os01g0772700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044394.1); similar to SF21-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82073.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.181175764849928 -1.48446530883951 0.166854496800587 1 1.05637391626208 12.8043688094190 -0.181175764849928 0.150833079029717 AT5G08000_at 2.9906415805309 3.05878932181759 2.42991749826827 2.57108521397939 2.03807263185636 2.21802605831276 2.53629381478541 2.82122740278932 2.30495054872216 3.16766082516236 4.09710390826538 4.89871667366665 3.23720239016048 3.38184754833716 5.11123373474672 3.61120514591093 3.05486382081873 4.49829196363533 3.06223185942383 0.261969485721646 0.262891100532025 0.266185869778369 0.265616942053472 0.265563799642253 0.270917318537974 0.262498048057916 0.261969485721646 0.270129177958799 0.266436869856579 0.261969485721646 0.270417904342270 0.261969485721646 0.279654779950085 0.271460235574768 0.261969485721646 0.261969485721646 0.269185495017305 0.263562197693898 5 0|5 /|+ 2564082 2565254 2564791.1 2563555 2565492 + gene protein_coding_gene TRUE TRUE AT5G08000.1 glycosyl hydrolase family protein 17 Identical to Glucan endo-1,3-beta-glucosidase-like protein 3 precursor [Arabidopsis Thaliana] (GB:Q9SD84;GB:Q8LBE9); similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT5G61130.1); similar to Os01g0763900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044338.1); similar to Os03g0756300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051316.1); similar to glycosyl hydrolase family 17-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15512.1); contains InterPro domain X8; (InterPro:IPR012946) -0.131451963579720 -1.48280371773254 0.167287953664228 1 1.05432730468305 5.9986346366069 -0.131451963579720 0.0643202128206179 AT5G57610_at 7.65300678282627 7.46900694184732 8.83214461749233 8.69891402640991 8.52656352590936 8.44326489662598 8.29532066095434 8.16416767754054 7.77831407586294 8.19769081352335 8.78665555780991 8.80931586340646 8.87481469923488 8.79860889544908 8.29729194444142 9.15803626334405 9.05519641625708 8.39355381594918 8.0892240796244 0.140142899849439 0.148192965446736 0.137487859632070 0.140596727724521 0.138477546576858 0.137195431710524 0.140149385239608 0.141830376685326 0.138026504961725 0.138753466478651 0.132680440926288 0.141139806644013 0.137483139619245 0.143616764832040 0.136759544686559 0.137413951136920 0.144624232000377 0.141190792926535 0.141093341581514 5 5|0 +|/ 23345384 23346286 23345954.222 23342533 23346573 + gene protein_coding_gene TRUE TRUE AT5G57610.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G79570.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G16270.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G04700.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABG54351.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) -0.125107816099891 -1.47929081959779 0.168207549547965 1 1.05000514057249 16.6570122270291 -0.125107816099891 0.0476281203500363 AT5G35300_at 2.38316684594291 1.98851799215515 2.65164008448092 2.36712466159671 2.12952539945243 2.40409103048134 2.00944460898764 1.84101456791067 2.76391269264465 2.46967410687644 2.34864263205856 2.17447706434097 1.80436185306311 2.48190980529571 2.47485104549103 2.23652689524231 2.65996021291079 2.57914741463827 2.28222729024091 0.207494806179894 0.211901040268879 0.211663574545054 0.209627842830089 0.207983148317216 0.207021796835153 0.207505313152105 0.212844621277722 0.214505264037114 0.213855491443826 0.207021796835153 0.210793310554122 0.210434753889988 0.211427678498036 0.209679903559891 0.208933787561047 0.209455619469795 0.207487255321228 0.217900571010595 5 5|0 +|/ 13535559 13536137 13535871.889 13535547 13536179 + gene protein_coding_gene TRUE TRUE AT5G35300.1 contains InterPro domain Somatomedin B; (InterPro:IPR001212) -0.149001248050021 -1.47900228438072 0.168283274305861 1 1.04965042175723 4.64694363819302 -0.149001248050021 0.100974350130295 AT5G49400_at 5.04244255649958 5.32075906998787 5.61525747612767 5.70487557044382 6.58801896861096 6.8440723798657 4.30799262670761 4.36557963351092 4.40822367314277 4.84302054229409 5.76269629330212 5.81279492523456 5.64412682915565 5.1186998037166 5.19662528065808 5.45827194713062 5.69253063176446 5.06810639392688 4.878944821196 0.237179017759253 0.224752430355788 0.238597372090763 0.229297631897933 0.228012587104335 0.245184252166990 0.238564230469854 0.232995386357593 0.23525817267874 0.227717993566022 0.230244858832921 0.227849869065179 0.224752430355788 0.231069550813491 0.232748215722279 0.224752430355788 0.240228018532245 0.225819159934585 0.225898924311753 5 5 + 20048628 20049181 20048863.364 20047926 20049401 + gene protein_coding_gene TRUE TRUE AT5G49400.1 zinc knuckle (CCHC-type) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to Zinc finger, CCHC-type [Medicago truncatula] (GB:ABE83191.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.132622890358847 1.47882571684699 0.168329628111761 1 1.04943337499239 10.5632720478803 0.132622890358847 0.0679933287682705 AT5G02140_at 1.01515104025736 0.670032849501621 1.03786763313453 0.96688969132961 0.880733052077667 1.22662194078049 1.11019792917816 1.25176743924289 0.529304333186715 0.678008127861311 0.744964223809189 1.12609836227496 1.08431642293477 1.30877764491688 0.985054445832574 0.860137044695785 1.58281497380447 0.891932695429913 0.827215215461647 0.225372331057756 0.230155678596193 0.226161036461780 0.234399409515605 0.221509248067811 0.225258502771092 0.221147817161182 0.231337749047292 0.228836916241059 0.230033571206524 0.227567646014682 0.2366044882538 0.236012334365527 0.232143901159700 0.226460665506866 0.226525620105144 0.221443223590702 0.234203132182395 0.22865853495336 5 5|0 +|/ 423786 424165 423971 423381 424434 + gene protein_coding_gene TRUE TRUE AT5G02140.1 thaumatin-like protein, putative similar to ATLP-1 (Arabidopsis thaumatin-like protein 1) [Arabidopsis thaliana] (TAIR:AT1G18250.1); similar to Os11g0706600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068554.1); similar to Thaumatin, pathogenesis-related [Medicago truncatula] (GB:ABE81419.1); contains InterPro domain Thaumatin, pathogenesis-related; (InterPro:IPR001938) 0.142424447865589 1.47831091356121 0.168464840732528 1 1.0488006427976 1.89550163137889 0.142424447865589 0.0888877021249447 AT5G37960_at 1.02124133730148 1.09514783680004 1.07230989527427 1.02386101658987 0.591079200951602 1.08417317287594 0.834587860418975 1.02139243072405 1.47543637081326 1.50323266054495 1.37217021551938 1.00654602805085 1.13809921711109 1.13012642910141 1.47093595802809 1.34778921791829 1.60400095922483 1.47701346074669 1.23446642928443 0.203274285749463 0.203274285749463 0.203274285749463 0.206073893969727 0.205814313606938 0.208023020103101 0.207279983591323 0.203274285749463 0.221705826359740 0.204288491660116 0.208208118215438 0.208574937736805 0.205883917630139 0.205000550686840 0.208847084581071 0.205147319840039 0.203606333900113 0.212557434025057 0.205303662734773 5 5|0 +|/ 15138668 15139019 15138827.3 15138668 15139066 + gene protein_coding_gene TRUE TRUE AT5G37960.1 oxidoreductase-related similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT3G03080.1); similar to alcohol dehydrogenase-like protein [Ocimum basilicum] (GB:AAX83111.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) -0.144304418634793 -1.47810438786179 0.168519110764598 1 1.04854684603021 2.32933093016376 -0.144304418634793 0.0925231022278493 AT5G42450_at 1.82436135880842 1.42289900933181 2.23149082754901 1.68343629228680 1.77364465784040 2.02462747463694 1.70019525166191 1.65603121130497 1.89679688464095 1.47600815163880 1.81684574858234 1.58040461834772 1.87693648386225 1.74963148778624 2.01887243510641 1.75387953909451 2.35959306714315 2.02185831880098 1.35982155890007 0.180455300322096 0.181293593785982 0.182958729079922 0.185281905759213 0.180469168985106 0.183611892018346 0.187777476298233 0.181216252841942 0.181359056935233 0.189908400201027 0.185200907816143 0.191981700369293 0.182635792343098 0.179284991912423 0.181641058634491 0.18486396164081 0.185050136346468 0.184254832859827 0.181887438511539 5 5 + 16995505 16996017 16995704.727 16994871 16996244 + gene protein_coding_gene TRUE TRUE AT5G42450.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G13600.1); similar to hypothetical protein MtrDRAFT_AC139526g18v1 [Medicago truncatula] (GB:ABE80149.1); similar to Os01g0839400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044753.1); similar to Os09g0327200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062888.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.163567974593666 1.47751470845237 0.168674147199548 1 1.04782231940311 3.52698321579440 0.163567974593666 0.125566468819495 AT5G24310_at 4.46434789388850 4.72286081097861 5.06559181443896 5.33087270551660 6.51420180580316 5.60705983337612 4.8443242779377 5.48493486770327 2.82133838740315 4.14190320102684 5.00159661489386 5.1318679414907 5.69601584578317 5.50242152420154 5.34573433688515 5.83732080111196 4.78780795724069 4.73796570696731 4.28244594956644 0.293141006926990 0.290725885868908 0.291306367213551 0.290004320408205 0.289222188469847 0.305624645063354 0.289222188469847 0.293305917055395 0.30817616718203 0.299562586078478 0.290096142276681 0.300066385383257 0.289222188469847 0.303860825527183 0.289222188469847 0.289222188469847 0.308131953691814 0.297263382973476 0.292697029892726 5 5 + 8275349 8276296 8275952.9 8273549 8276529 + gene protein_coding_gene TRUE TRUE AT5G24310.1|AT5G24310.2 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) Identical to Protein ABIL3 (Abl interactor-like protein 3) (AtABIL3) (ABIL3) [Arabidopsis Thaliana] (GB:Q6NMC6;GB:Q3YIV3;GB:Q3YIV4;GB:Q9FNF1); similar to ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT3G49290.2); similar to Probable protein ABIL3 (Abl interactor-like protein 3) (GB:Q5NB83); similar to Os01g0236400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042529.1); similar to Os01g0551800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043308.1) 0.218131506759185 1.47699759094993 0.16881020681445 1 1.04718709780438 9.756101178074 0.218131506759185 0.202591611873120 AT5G66310_at 2.34291681500288 2.25100741811676 1.98640311381231 1.89632005642039 1.99681497298553 2.20995271771592 2.22473293543266 2.45250257410426 2.69264541143611 2.88130680536334 3.9447680161216 5.36791791489697 3.24651782349859 3.34510061083343 4.5704549780982 3.68194260276554 2.83642752985322 4.08922685112557 3.70684643645104 0.242504200107091 0.241888541008441 0.248414287839253 0.253991586234709 0.239687453601522 0.245773050177116 0.239104152197065 0.248825822255290 0.239408629146466 0.242393917915334 0.246101904560850 0.25850516791204 0.241362715241154 0.248386749319541 0.256499416964781 0.239940413352757 0.239104152197065 0.240142919162347 0.242988454156508 5 5|0 -|/ 26503182 26503708 26503461.9 26502911 26508608 - gene protein_coding_gene TRUE TRUE AT5G66310.1 kinesin motor family protein similar to kinesin motor family protein [Arabidopsis thaliana] (TAIR:AT4G24170.1); similar to kinesin motor family protein [Arabidopsis thaliana] (TAIR:AT3G51150.1); similar to Kinesin motor domain, putative [Medicago truncatula] (GB:ABE89357.1); similar to putative kinesin heavy chain [Oryza sativa (japonica cultivar-group)] (GB:BAD09937.1); similar to hypothetical protein [Thellun (GB:ABB45845.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain DNA topoisomerases I, dispensable insert, eukaryotic-type; (InterPro:IPR009054) -0.128556072581898 -1.47617702458905 0.169026300967377 1 1.04617941023868 5.65952837144016 -0.128556072581898 0.0583963984565546 AT5G60250_at 1.32249914051956 1.58103452328393 2.08590689071541 1.58874460684234 1.64497585938890 1.91230581692234 1.52829086831483 1.52355882435588 1.71429257936579 1.74177227519818 1.77868097490898 1.67587051559327 2.24516606235412 1.41393094146709 2.12697951450391 1.98081761183395 2.37829297041923 2.19523568310626 1.71290125339433 0.209284902505781 0.204280669122644 0.204204879476579 0.204050531072908 0.204944357414789 0.206587961576273 0.205547808543881 0.206050764047871 0.204279262138948 0.208474640442282 0.204470952510891 0.201869408647902 0.206149792894890 0.201446186338495 0.201446186338495 0.201446186338495 0.205499017645968 0.204390344203867 0.207794567462085 5 5|0 +|/ 24271145 24271890 24271594.3 24269384 24272075 + gene protein_coding_gene TRUE TRUE AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G25370.1); similar to zinc finger family protein, putative [Solanum demissum] (GB:AAT40530.2); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.152318274055586 1.47531510991566 0.169253540066974 1 1.04512132522552 3.49709480975596 0.152318274055586 0.107447100107271 AT5G43580_at 0.832051354557326 0.94726325185559 0.659075778474312 0.766659896827447 0.989041862367481 0.751894133269327 1.28329979217014 0.675747735926913 1.37667793724329 1.54525402740688 1.00453804531868 1.28064732137289 0.982022684430216 1.06696063841198 1.51997108600973 1.14949405168202 1.06789717752072 1.69255101695668 0.842229994827048 0.196135184481777 0.200536343993805 0.194241516759495 0.195852040950397 0.193245421122482 0.204204641406283 0.197338247707714 0.197427932531915 0.198015151255622 0.201914623988934 0.199046319977013 0.199043959323657 0.204679049048726 0.20054860411168 0.197916775518968 0.195446785408435 0.195077083203439 0.203161327899198 0.195205865679121 5 0|5 /|- 17525325 17525501 17525389 17525111 17525867 - gene protein_coding_gene TRUE TRUE AT5G43580.1 serine-type endopeptidase inhibitor -0.157409593810179 -1.47479109690397 0.169391821512415 1 1.04447823811047 2.10074467861704 -0.157409593810179 0.116115252416744 AT5G58910_at 1.80108060485777 1.71873990967651 1.18656798472804 1.83249681300431 1.59224853134549 1.36645330435013 1.216241761737 1.71694026992716 1.78408884432124 1.78009952893944 1.30651309974519 1.67535178597591 1.8841487474109 1.95115167057534 1.86425161227105 1.63884914619707 1.94679579944926 2.08709080607691 1.78863554825376 0.185528130288527 0.187922795245034 0.193771478276958 0.191917772772664 0.192857032866296 0.190015960585978 0.191583235753985 0.189214065973889 0.188561195137244 0.189070873556536 0.185528130288527 0.185528130288527 0.19402453577172 0.185528130288527 0.188836736553562 0.189604020167442 0.197586306969130 0.189715307372001 0.203187391351523 5 5|0 -|/ 23807098 23807503 23807326.2 23806748 23808907 - gene protein_coding_gene TRUE TRUE AT5G58910.1 LAC16 (laccase 16); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC10 (laccase 10), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G01190.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to diphenol oxidase (GB:AAC49536.1); similar to laccase [Pinus taeda] (GB:AAK37830.1); similar to laccase (EC 1.10.3.2) precursor - common tobacco [Oryza sativa (japonica cultivar-group)] (GB:AAX95423.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.17752529563672 -1.47371379198969 0.16967641571542 1 1.04315658437355 3.34311800943706 -0.17752529563672 0.1474204852948 AT5G55470_at 2.30842248348357 2.45515474666585 3.44795767152113 2.88635955819057 3.58333216050748 3.58491294580976 2.93302602192928 3.11390500830586 3.34095122644649 3.28779970334384 2.99735135497811 3.45990912582703 3.23291873046330 3.28404207299381 3.0296016013385 3.24971654213918 2.72484381433151 4.09791935046135 3.18577558420204 0.23459409709373 0.237056372932554 0.246666870929690 0.241137914551643 0.244013625895849 0.249579534507968 0.241838781043329 0.238950109218312 0.246974512793890 0.249480867762842 0.240502548088187 0.232432988382138 0.234172237931864 0.243959752346427 0.232623096299198 0.232491563606078 0.240475395242678 0.234182453825407 0.230426836514051 5 5|0 -|/ 22486797 22487651 22487194.333 22486473 22489932 - gene protein_coding_gene TRUE TRUE AT5G55470.1 ATNHX3 (Arabidopsis thaliana Na+/H+ exchanger 3); sodium:hydrogen antiporter member of Sodium proton exchanger family Identical to Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4) (NHE-4) (NHX4) [Arabidopsis Thaliana] (GB:Q8S397;GB:Q9FJ63); similar to NHX2 (sodium proton exchanger 2), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G05030.1); similar to NHX1 (NA+/H+ EXCHANGER), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G27150.1); similar to Na+/H+ antiporter NHX3 [Zea mays] (GB:AAP20430.1); similar to Na+/H+ antiporter NHX5 [Zea mays] (GB:AAP20432.1); similar to Na+/H+ antiporter NHX4 [Zea mays] (GB:AAP20431.1); contains InterPro domain Sodium/hydrogen exchanger subfamily; (InterPro:IPR004709); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) -0.150842759198621 -1.47348378527070 0.169737230315862 1 1.04287448762903 6.30465715558371 -0.150842759198621 0.105214176434150 AT5G61580_at 7.75228464311858 7.89462057932949 8.74650557818652 8.82892614245378 8.8711234504427 8.80767967946732 7.67085270271855 7.44697258943164 7.06617643544285 7.56557685518824 7.95548097074583 8.15166833669733 8.18484449836607 8.04835002453937 8.36255715009176 8.77529347675899 8.66757794848161 8.19755584415515 7.39483416729691 0.159452626730205 0.164611235269817 0.170542536605741 0.161046074254431 0.166587174483966 0.167745756376316 0.167473936914137 0.172617113248896 0.168642172249156 0.168631206649919 0.165076411492983 0.160379291446542 0.169606548823286 0.1596401397921 0.162965639361768 0.159452626730205 0.164346566343955 0.160911556357456 0.168973762197114 5 5 + 24780182 24780958 24780622.909 24778305 24781240 + gene protein_coding_gene TRUE TRUE AT5G61580.1|AT5G61580.2 phosphofructokinase family protein|6-phosphofructokinase similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD86939.1); similar to Phosphofructokinase, putative [Medicago truncatula] (GB:ABE90419.1); similar to Phosphofructokinase [Medicago truncatula] (GB:ABE80791.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.125095206704591 1.47279810681630 0.169918637261341 1 1.0420336872814 16.069926595913 0.125095206704591 0.0493130144023978 AT5G11510_at 1.17508191975437 1.74553072002252 1.69828997787377 1.83327849530268 1.11069762794639 1.51048359669361 1.13291771847199 1.510433165115 1.88070375103098 1.97925813779197 2.32396192904728 2.67215002121776 2.20078593176998 2.35034277897193 2.38708805097283 2.05550902360188 2.11233170938897 2.27884167196153 1.63304764907942 0.203629855265321 0.197298934622869 0.206362201936333 0.210072314118498 0.202840189192415 0.207653431434928 0.204118880552215 0.203532193986135 0.21362277945927 0.218202576250573 0.207283244958551 0.204310388792088 0.196449996627554 0.200072471762321 0.205648908941721 0.206743852135970 0.203640834670832 0.203931179296001 0.206574287445026 5 5|0 +|/ 3683736 3684644 3684046.6 3679809 3684875 + gene protein_coding_gene TRUE TRUE AT5G11510.1|AT5G11510.2 MYB3R-4 (C-MYB-LIKE TRANSCRIPTION FACTOR 3R-4, myb domain protein 3R-4); DNA binding / transcription factor Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4 similar to PC-MYB1 (myb domain protein 3R1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G32730.2); similar to Myb [Nicotiana tabacum] (GB:BAB70511.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.171776698736374 1.47251300593564 0.169994114146762 1 1.04168416039341 3.52890393710620 0.171776698736374 0.139089069264292 AT5G59490_at 1.3967938220857 1.68137538720442 2.17057929617710 2.64347288606704 1.28320885089218 1.61573450367033 1.42403430802217 1.01438681095096 1.09989349477271 1.58097749940029 1.1945645183093 1.12578163481405 1.49519241652557 1.40743682771439 1.36122715138994 1.41499843037655 1.62857725392247 1.72022390418369 1.56909186441967 0.198691962157614 0.192842080181241 0.204330618209141 0.201575711134091 0.200846972285641 0.203841252074405 0.198789703704116 0.192842080181241 0.198090175886633 0.195946936359563 0.20663518438508 0.202666983243918 0.195720185851265 0.192842080181241 0.211093760020776 0.197458528185164 0.203910044792408 0.207179938781917 0.194715376157351 5 5|0 -|/ 24000168 24001046 24000666.444 23999950 24001843 - gene protein_coding_gene TRUE TRUE AT5G59490.1 haloacid dehalogenase-like hydrolase family protein similar to haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G02230.2); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85628.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Pyrimidine 5-nucleotidase; (InterPro:IPR010237); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) 0.167082124921661 1.47133525041680 0.170306215343091 1 1.04024071316834 3.07127550980976 0.167082124921661 0.132134845265795 AT5G27240_at 3.07485053270352 3.06156873494651 3.35785948680882 3.31382596173025 3.5312233612682 3.55799087263978 2.84745885614807 2.98677116392319 2.95178887251023 2.26617414917531 3.51486945205048 3.43868705349976 3.77696092626162 3.7906601226462 3.18689727673108 3.20657369458818 3.47555930861672 3.47756541584631 2.95822238674026 0.196321626765504 0.190658104227369 0.190147395556833 0.187876555301430 0.193640096994960 0.186677578286878 0.195547215672916 0.190733724068782 0.204873267423258 0.194257059361364 0.186426149175581 0.186965263570743 0.191968815823290 0.18940015502287 0.194988142659141 0.186426149175581 0.186426149175581 0.192076214156188 0.190148029797573 5 5 + 9600343 9600810 9600617.182 9597555 9600869 + gene protein_coding_gene TRUE TRUE AT5G27240.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G04980.1); similar to heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] (GB:ABF69988.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.118996877065542 1.47069075994075 0.170477211281057 1 1.03945114005917 6.32087701748203 0.118996877065542 0.0258076532384363 AT5G03920_at 1.57775374575763 1.60433404398074 1.55701884276271 1.65397248355063 1.51899518506438 1.76784925383673 1.71583645802931 1.31893993501741 1.41582487805428 1.8443880250204 1.64645750036439 1.82626738694292 1.61976771632758 1.54724598629958 1.55209998803925 1.43624937817338 1.85957263947692 1.34705454939449 1.88813800802057 0.184058707616653 0.183463354117882 0.184980421544873 0.189734919129878 0.183463354117882 0.191826622198122 0.195189217358236 0.183463354117882 0.192991759837847 0.187306745789002 0.186757501672976 0.190579578469251 0.206966351567158 0.187906021598048 0.186427443757106 0.187530999764344 0.192542982537668 0.206602643906962 0.187800135620340 5 5 + 1058165 1058622 1058369.091 1058145 1058768 + gene protein_coding_gene TRUE TRUE AT5G03920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03930.1) -0.138527517500084 -1.46888438899830 0.170957262381905 1 1.03723929912000 3.24956567524614 -0.138527517500084 0.0829149878350295 AT5G64760_at 5.68624783333748 5.37591313476596 6.86137188746162 6.47444417126901 6.79669144073826 6.25416627613756 5.51464473723057 5.94922889645247 5.17521425777844 4.85309089951909 6.35581765053361 6.77089421476316 6.21358878593832 6.59011098461268 6.97266707196716 6.63672440002055 6.35922351966683 6.2093871154517 5.19066267925284 0.248432342409571 0.240774535499446 0.235454175882697 0.237667877849878 0.235454175882697 0.244528400330132 0.238799006669773 0.242867618188794 0.253319160615396 0.245797363391808 0.238029127544537 0.235454175882697 0.247681188770432 0.241022209908392 0.244458220087702 0.237177333432767 0.257828386365422 0.24880724665601 0.236085639064612 5 5|0 -|/ 25911342 25912057 25911701.1 25911006 25913808 - gene protein_coding_gene TRUE TRUE AT5G64760.1|AT5G64760.2 26S proteasome regulatory subunit, putative (RPN5) similar to EMB2107 (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.1); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to EMB2107 (EMBRYO DEFECTIVE 2107) [Arabidopsis thaliana] (TAIR:AT5G09900.2); similar to Os03g0851300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051914.1); similar to 52O08_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67560.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92718.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.177032649666955 1.46760388859828 0.171298263177938 1 1.03567241138208 11.9073590455338 0.177032649666955 0.147778715538480 AT5G09620_at 10.2230737905242 10.4627038670339 10.9637986581962 11.0398466858432 11.4123083976934 11.2185088728164 10.6484934472251 10.7171349802702 9.85962352735385 10.1403039203963 10.8184868457105 10.7334018094133 11.0102299859377 10.6537882520355 10.6724273283134 10.8216854028754 10.8208003348771 10.8473488858454 9.89213008845745 0.0648861403971684 0.0658015774171992 0.0657654590415027 0.0683475511248271 0.0638540017012654 0.0663326991824821 0.0682864821842132 0.0714484390308457 0.0744272157626024 0.0677227383919055 0.0682802879487899 0.0648490090216294 0.0652815503939631 0.07417610527026 0.0666593498392239 0.0644114727554309 0.0724262047394047 0.0672022495466044 0.067333253019533 5 5 - 2983764 2984328 2983990.455 2983450 2985436 - gene protein_coding_gene TRUE TRUE AT5G09620.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G64430.1); similar to cticosapeptide/Phox/Bem1p (PB1) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19136.1); similar to Os02g0809100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048461.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.126948924125567 1.46694135666246 0.17147492618434 1 1.03486204224057 21.2163787296313 0.126948924125567 0.056203026862602 AT5G14680_at 7.89518911495933 7.8040281928861 8.57607820799238 8.54394349706044 8.71310995043804 8.92792945960817 7.68433349171363 7.89513051954549 7.02315205961504 7.73277198740968 8.22396998850502 7.93569864659565 8.30648635346506 8.23892024692288 7.6837485852659 8.17525701766128 8.08689774732045 8.25985168143738 7.46089643581977 0.150116138470451 0.153317234151766 0.155160518871396 0.151810925091205 0.165337804116890 0.1619105137892 0.153372578365681 0.156417565657295 0.176071168531711 0.154298769889853 0.150013868720324 0.153060749688532 0.151890151747571 0.162016334803332 0.157011745764052 0.146350978352426 0.162667584177991 0.149029125610397 0.151348974144452 5 5|0 -|/ 4731642 4732965 4732368.333 4730910 4733084 - gene protein_coding_gene TRUE TRUE AT5G14680.1 universal stress protein (USP) family protein similar to universal stress protein (USP) family protein [Arabidopsis thaliana] (TAIR:AT3G01520.1); similar to putative ethylene response protein [Capsicum chinense] (GB:CAJ13711.1); contains InterPro domain Universal stress protein (Usp); (InterPro:IPR006015); contains InterPro domain UspA; (InterPro:IPR006016) -0.126373379261480 -1.46645555730510 0.171604563024629 1 1.03426798911477 16.0146981097812 -0.126373379261480 0.0547043726581453 AT5G10320_at 3.6132632357141 3.43188196988327 3.95526340518716 4.461324255819 5.30597344757318 4.60375626560808 3.89470934955151 3.18491575698039 2.85300535068408 3.48685608538216 3.76529396909505 4.16251292369635 4.06818960731707 4.82896913816792 3.51028339442528 4.40764870920084 4.85033599240054 3.75651704501913 3.72555603907233 0.242691693931014 0.238673568761583 0.249675894638104 0.238907350852665 0.243705641430346 0.248851620036071 0.251732162591693 0.251129836514184 0.254902196066152 0.240859450101438 0.241074659243578 0.236682678966120 0.242981261421847 0.242308272780820 0.242490510911803 0.244008936330952 0.241246781299927 0.237229007047130 0.236682678966120 5 5|0 -|/ 3244183 3245347 3244625.5 3243957 3246722 - gene protein_coding_gene TRUE TRUE AT5G10320.1|AT5G10320.2|AT5G10320.3 similar to 80A08_29 [Brassica rapa subsp. pekinensis] (GB:AAZ67614.1) 0.211726978636317 1.46617734018054 0.171678843840688 1 1.03392783127349 7.81831496368698 0.211726978636317 0.196240681988477 AT5G39380_at 2.57767057524986 2.47836340312482 2.81561950871371 2.86951779291618 2.57427681279908 3.06347833859991 2.37403930008372 2.31497497578370 2.65978572148780 2.39126170531965 3.07781853809458 3.08624261459459 3.10542451241321 2.82055537566459 3.12883457004728 3.12334192569978 2.92217065108965 2.99523134115957 2.38855999871946 0.171970992022052 0.166922856560252 0.170991692671952 0.164508601374339 0.164445640742269 0.173894944461480 0.165421356951417 0.164445640742269 0.179036947396699 0.167438659373573 0.171200099724028 0.171440593539118 0.166643479983354 0.168874751274824 0.166463418129462 0.167606531250393 0.166617343299862 0.167094956929682 0.166525261355565 5 5 - 15776398 15776922 15776642.545 15775945 15777914 - gene protein_coding_gene TRUE TRUE AT5G39380.1 calmodulin-binding protein-related similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G15430.1); similar to Os12g0506500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066838.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to hypothetical protein DDBDRAFT_0167567 [Dictyostelium discoideum AX4] (GB:XP_644266.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) 0.140494536203419 1.46567390010129 0.171813326714315 1 1.03331241213353 5.38965337987773 0.140494536203419 0.0874865639587834 AT5G41550_at 1.31099306430665 1.04006918786717 1.54156864980064 1.72302055271872 1.09955855418262 1.53138267288804 1.50955853029962 1.74038745357274 1.08913655874678 1.28189654382766 1.53954682225238 1.47393709047789 1.81678757687099 1.54920548884441 1.32701939902154 1.56269728107496 1.67194872686096 1.68465396270128 1.12380353970892 0.217910528505457 0.216842285560539 0.217135029189464 0.214024134608320 0.215465529857915 0.219011682319694 0.218008625958972 0.214025220951258 0.217753769434289 0.224015489303743 0.215656968165649 0.223104883483323 0.217326348892561 0.214024134608320 0.221064058590630 0.215223489175678 0.217215612052615 0.226100207107969 0.217397968805366 5 5 - 16634461 16635007 16634838.545 16634460 16638013 - gene protein_coding_gene TRUE TRUE AT5G41550.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41750.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41540.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G40910.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.148071365584388 1.46518110392518 0.171945053771992 1 1.03271013425024 2.80865237867494 0.148071365584388 0.101805368764301 AT5G35190_at 0.699842962918378 0.51449403531581 1.13163163277754 0.870455557467305 0.69064093170327 0.972307726558038 0.36910340500581 0.828790292646471 0.482209403550277 0.693708043667073 1.03418084666721 0.426920919734583 0.956270085915465 0.634955220815617 0.857956165202774 0.637382115743626 0.713020915769932 0.472601169976281 0.683155695005917 0.208763328416992 0.209208594914281 0.227370170685001 0.217787405445296 0.208754761018097 0.214725821614848 0.208811735984699 0.217489183069002 0.214277810944891 0.213017006241337 0.220315325731431 0.217814212889242 0.208754761018097 0.210789070647464 0.213460713712203 0.210975834117875 0.213746326257378 0.226557936603314 0.214647661666793 5 5 + 13451889 13452373 13452226.091 13451411 13452397 + gene protein_coding_gene TRUE TRUE AT5G35190.1 proline-rich extensin-like family protein similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT5G06640.1); similar to Extensin-like re (GB:ABD65126.1); contains InterPro domain Extensin-like region; (InterPro:IPR006706) 0.151845339658590 1.46474402289394 0.172061960314229 1 1.03217605697463 1.42783430674205 0.151845339658590 0.108517194905366 AT5G18820_at 1.81996411871126 1.49721615903347 1.76952151280971 1.87875383651151 1.44921491916748 1.49350880442192 1.75971396329840 1.43342429973737 1.54735938849556 1.45789709497477 1.58263862740277 1.58970334371238 1.30589240892274 1.46654785087827 1.02236598889822 1.38609584028483 1.95094187954311 1.38636735532789 1.59521319358664 0.225443010293761 0.225443010293761 0.236630384969322 0.235253910322335 0.225443010293761 0.228071599730536 0.225443010293761 0.226696089707907 0.233057338523862 0.234545644098216 0.233391172161115 0.225443010293761 0.230233432137909 0.238725872166468 0.225443010293761 0.237006733830367 0.233755605624353 0.228709015924806 0.227679366391994 5 5|0 +|/ 6273363 6274063 6273818.5 6271491 6274329 + gene protein_coding_gene TRUE TRUE AT5G18820.1 EMB3007 (EMBRYO DEFECTIVE 3007); ATP binding / protein binding / unfolded protein binding similar to CPN60A (chloroplast / 60 kDa chaperonin alpha subunit), ATP binding / protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT2G28000.1); similar to putative rubisco subunit binding-protein alpha subunit precursor (60 kDa chaperonin alpha subunit) [Oryza sativa (japonica cultivar-group)] (GB:AAP44754.1); similar to putative rubisco subunit binding-protein alpha subunit [Trifolium pratense] (GB:BAE71311.1); similar to GroEL-like chaperone, ATPase [Medicago truncatula] (GB:ABC75363.1); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844); contains InterPro domain chaperonin GroEL; (InterPro:IPR012723) -0.137649210255372 -1.46427296656054 0.172188030546101 1 1.03160057790444 3.13506922882319 -0.137649210255372 0.0820003119691187 AT5G63710_at 7.69418208104878 7.79272960889215 8.4554717789534 8.53778511426005 9.05321737739213 8.8834718950288 8.2846018293274 7.58753926066796 6.34620229062167 6.12188275362818 7.38355477573993 7.7372292984844 7.47640967885597 7.34531296165989 7.29618303823518 8.09611769148555 8.37290639951812 7.46591316530316 6.37826630979362 0.198956164136107 0.189893812386185 0.195096073846260 0.195463558193256 0.204439093092944 0.19874170358937 0.189380408890020 0.188731513033270 0.213256505464574 0.216479362535819 0.198425717198987 0.185984987861175 0.191847904013896 0.188949873466631 0.198494035109307 0.185984987861175 0.188010349042357 0.190124768198331 0.213930402220145 5 5 + 25519218 25519748 25519464.364 25516640 25520024 + gene protein_coding_gene TRUE TRUE AT5G63710.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G10290.1); similar to Protein kinase [Medicago truncatula] (GB:ABE86996.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.162444567221482 1.46417948411563 0.172213058948706 1 1.03148638645090 15.2505351152837 0.162444567221482 0.126127868101631 AT5G11050_at 0.830463554053497 1.38300372982626 1.01303982555984 1.46242860749168 1.20679636743996 0.946734168310276 1.28464266075808 1.38042494075587 1.30574528960881 2.09310809571738 1.61813100742629 1.57958751737661 1.60046515902964 1.47657968427628 1.54915362761935 1.54980898391778 1.71962362897711 1.74732952962444 1.64821803575565 0.205978289399893 0.205664291401196 0.203818553877852 0.20339467445838 0.199674844087232 0.206173655880983 0.199674844087232 0.20100941395517 0.210635382281172 0.216436104608873 0.204694670222224 0.206166535567950 0.200537552074613 0.201329914905485 0.212979308243732 0.199674844087232 0.203540304584463 0.206414705138503 0.200571467824946 5 5 + 3503053 3503611 3503360 3502093 3503835 + gene protein_coding_gene TRUE TRUE AT5G11050.1 MYB64 (myb domain protein 64); DNA binding / transcription factor Member of R2R3-MYB transcription factor gene family. similar to MYB119 (myb domain protein 119), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G58850.1); similar to MYB transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67643.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.166342085049038 -1.46413849894761 0.172224033043314 1 1.03143632336728 2.83216274809521 -0.166342085049038 0.132254700521869 AT5G37290_at 4.60496710895176 4.85877820016647 6.63808823325539 6.31376327477626 6.66433568775911 5.64679178675362 6.4967755671667 5.43041348688646 3.44259192475679 4.12787797275365 5.37304835674423 5.72578869386621 5.99970193715954 5.16781636730213 5.90858879501123 5.4185289437041 4.91519511094809 5.42311986448134 4.44592267912387 0.242171269409483 0.235941168652879 0.239024584390221 0.240533284042886 0.246545130467621 0.235941168652879 0.240714875123368 0.240987449519046 0.240601113547222 0.241089940773457 0.235941168652879 0.237306082284434 0.247212657404415 0.253968086239516 0.241981199411454 0.237702702031097 0.242413151821982 0.239375975208813 0.235941168652879 5 5|0 +|/ 14780005 14781278 14780879.625 14779600 14781574 + gene protein_coding_gene TRUE TRUE AT5G37290.1 armadillo/beta-catenin repeat family protein similar to Armadillo [Medicago truncatula] (GB:ABE83267.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.264701578345808 1.46131293286646 0.172982046321873 1 1.02798706219335 10.5802080186462 0.264701578345808 0.264843211738221 AT5G44850_at 0.315386072338209 0.426321709774604 0.54500501085643 0.655806376993002 0.59033996024316 0.667876278108405 0.729631269438359 0.891648757917386 0.414371506098563 0.457285032373586 0.709019629929923 0.490370605700683 0.481732239854034 0.414145118597047 0.738528736075043 0.575721573168707 0.815375389105117 1.11961930342999 0.179266759319014 0.185180905279532 0.198898331929743 0.187153119804055 0.187579240120216 0.185413010280854 0.191421565772672 0.186735738749450 0.190633227477757 0.188222461266241 0.18964317016457 0.192793634489334 0.185323241811861 0.185180905279532 0.187925197446911 0.196379607705982 0.191181739005396 0.190141029587996 0.199482450758689 0.191700433825355 5 5 + 18126100 18126786 18126427.909 18125531 18126820 + gene protein_coding_gene TRUE TRUE AT5G44850.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G05080.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE85786.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE84776.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.121716685545974 1.46121767611077 0.173007650527284 1 1.02787085297117 1.11193784966517 0.121716685545974 0.0412600954771057 AT5G45530_at 2.51508863070082 2.43833283221538 2.82801864259082 2.77647123406096 1.86494337093678 2.31266230034193 2.27225859386626 2.38084822874630 2.44185942613902 2.19504107462476 2.25519209259391 2.97428022504733 2.57756827910751 2.22895446691961 2.40294922478555 2.48758597015209 2.35924098695621 2.64278019685019 2.2538171957636 0.19913347004945 0.203487530888864 0.201771152882091 0.197790546848193 0.196553668514519 0.210243736709079 0.196901290118582 0.196553668514519 0.206842662340669 0.203892820763280 0.198035620189419 0.199428778636226 0.196553668514519 0.204930804696501 0.200602997411971 0.196965181488384 0.212460678069316 0.202878659116163 0.204785143467475 5 5 - 18471603 18472117 18471800.455 18471543 18474504 - gene protein_coding_gene TRUE TRUE AT5G45530.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45470.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45540.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45480.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87859.1); similar to Os07g0105800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058700.1); similar to Os07g0109100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058721.1); contains InterPro domain Protein of unknown function DUF594; (InterPro:IPR007658) -0.136809372830290 -1.45883101651463 0.173650224514167 1 1.02496080321089 4.81756539375441 -0.136809372830290 0.081315905474119 AT5G22910_at 1.96057058857476 1.98157528774923 2.19327963587520 1.94947379855848 1.84186097889995 2.12332688333182 2.29773879340419 2.00249665743302 2.27595569662390 2.00622911978251 2.25980720642619 1.80609372287216 2.40988003761072 1.88073582591834 2.21077870381234 1.93123105221936 2.11775741262035 2.15528670068935 1.67454200671674 0.176817478701926 0.172394605730658 0.167743229919840 0.170005354422129 0.167743229919840 0.174091186005027 0.168359136602473 0.1743225329356 0.172714941319159 0.173205051598748 0.176521378547197 0.170167603232025 0.173805011505275 0.170779414419194 0.181189684228602 0.169176882603611 0.167743229919840 0.172265897708442 0.170807223646797 5 5 - 7660991 7661426 7661176.273 7660930 7663832 - gene protein_coding_gene TRUE TRUE AT5G22910.1 ATCHX9 (cation/hydrogen exchanger 9); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX10 (CATION/H+ EXCHANGER 10), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G44930.1); similar to ATCHX11 (cation/H+ exchanger 11), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G44920.1); similar to ATCHX12 (cation/H+ exchanger 12), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G44910.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE91505.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) -0.137220339590908 -1.45807844236244 0.173853267592948 1 1.02404381937534 4.08480129821774 -0.137220339590908 0.08231900546833 AT5G58850_at 1.64431650106212 1.39368107085959 1.96583120506093 1.61587496548056 1.36026293109090 2.11895631225503 1.61971171566972 1.81144457319075 2.06722935098828 2.10633422805725 2.01452403019196 1.67439059184507 1.69027189010997 1.70430297981305 2.13487352977645 1.60017544721478 1.73155006965652 1.93150579420267 1.93790575212978 0.204691602720064 0.208101199073679 0.208315168536427 0.206576716491191 0.203647530775549 0.210215734649682 0.202048331225885 0.211003285499153 0.212945659403756 0.206696616275233 0.201981358377425 0.205402479278923 0.206666064483816 0.206509645743989 0.216048851916578 0.2032465853421 0.204082543769994 0.207858419065660 0.212947758805605 5 5 + 23782186 23782635 23782405.636 23781171 23782667 + gene protein_coding_gene TRUE TRUE AT5G58850.1 MYB119 (myb domain protein 119); DNA binding / transcription factor Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119). similar to MYB64 (myb domain protein 64), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11050.1); similar to MYB transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67643.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.180495080443609 -1.45798755806338 0.173877801750523 1 1.0239331006228 3.61493777699690 -0.180495080443609 0.154558706259456 AT5G06900_at 1.60619693013756 1.61597620449455 1.98734342427289 2.01008042878043 1.36937036884045 1.82208901003973 1.59946117536238 1.53005912863061 1.81255577631811 2.29100065390397 1.96454453453009 1.586614641727 1.95666650876742 1.75146694206732 1.97441594123763 1.71161145125082 1.94824440109433 1.94671328197539 2.04612680157165 0.198995946861443 0.201176093553686 0.209418861183188 0.204216816751572 0.198995946861443 0.208359384583456 0.19984538440374 0.201573027528231 0.199437472671891 0.202144094252046 0.203512036121623 0.199628892887647 0.201894659552212 0.199873374618280 0.204082784038257 0.200623921213237 0.208068002284668 0.203173644738306 0.20232512979388 5 5 - 2136182 2136609 2136402.636 2136161 2137926 - gene protein_coding_gene TRUE TRUE AT5G06900.1 CYP93D1 (cytochrome P450, family 93, subfamily D, polypeptide 1); oxygen binding member of CYP93D similar to CYP712A1 (cytochrome P450, family 712, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G42250.1); similar to Cytochrome P450 93A1 (GB:Q42798); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.135807034173635 -1.45794385419006 0.173889600637803 1 1.02387986044824 3.64503664553441 -0.135807034173635 0.0793759728327737 AT5G26990_at 6.95075348340339 7.60146125205827 8.51389522472387 8.47591743061501 8.83044179447466 8.29885950340967 7.43505523250406 7.47967253165433 6.84046991112332 6.29275287120073 7.82956565206036 7.5796266096407 7.55102884519082 8.01562828163706 7.13264388195128 7.87995656418147 7.25125863975966 7.55486844157133 6.20508060344734 0.219835765370641 0.194004561216795 0.202533078543166 0.198702745002930 0.197227312400775 0.198171932067411 0.198445744032481 0.194907936185898 0.215631554745173 0.197572903300165 0.198907818171886 0.198936596979398 0.193110080423470 0.198757274803635 0.216952270926741 0.193110080423470 0.216836185014185 0.199941450209306 0.197654399325514 5 5 + 9492260 9493543 9492927.636 9491075 9493923 + gene protein_coding_gene TRUE TRUE AT5G26990.1 drought-responsive family protein similar to drought-responsive family protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19; (InterPro:IPR008598) 0.174230904075168 1.45562438350208 0.174516780096955 1 1.02105573614241 14.9709686781502 0.174230904075168 0.145760251111696 AT5G01340_at 2.84180492874437 3.28073425458115 3.45874016189729 3.47509666173114 3.06777754199619 2.72523507903408 2.66229053481188 3.07055077567406 2.33131542390774 2.66517984434946 3.26235244620374 4.00812974752286 3.12711760391792 3.57141052590765 3.88374852342367 3.17583114217527 3.34603711221062 3.51415521834501 2.50488901088769 0.194099856449352 0.189075075292729 0.191199871789437 0.189075075292729 0.195305079618853 0.204023939457624 0.194381136781949 0.197226505960421 0.210664041169242 0.195179504662376 0.201236502206075 0.197163842377829 0.200991107113185 0.189944142024845 0.209443314771523 0.189075075292729 0.210767523496238 0.199123038104923 0.196134336066104 5 5 - 143242 144197 143571.273 143054 144719 - gene protein_coding_gene TRUE TRUE AT5G01340.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G37890.1); similar to Os03g0292200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049803.1); similar to Mitochondrial carrier protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95404.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.157351296317686 1.45504410952517 0.174673987107391 1 1.0203496592694 6.06605835048125 0.157351296317686 0.119512790140197 AT5G53590_at 4.05577019404522 4.66076348441815 5.26433709194324 5.35393521192754 4.87162195697634 4.42745865451252 4.82572666936347 4.84336731828017 3.40085318221977 3.94626310583462 4.61091571086779 4.94259255628742 4.96163843740477 4.71490678183113 4.75918669910025 5.11646804326952 4.94661523262198 3.9328803542875 3.93035193554932 0.250084059553170 0.247585646828671 0.260033749827546 0.250943869527932 0.249908378206386 0.255729906762431 0.253417369096559 0.247585646828671 0.269100940619186 0.256764853461191 0.253136946741068 0.247585646828671 0.247585646828671 0.255716274604060 0.259173974459440 0.248678676040889 0.256457103658166 0.256004013776579 0.260517816679221 5 5 + 21789393 21789719 21789590.636 21789047 21790020 + gene protein_coding_gene TRUE TRUE AT5G53590.1 auxin-responsive family protein similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G00880.1); similar to Auxin responsive SAUR protein [Medicago truncatula] (GB:ABE93517.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) -0.164391368612334 -1.45491534384896 0.174708888539593 1 1.02019300168597 9.04152584843001 -0.164391368612334 0.130840877902994 AT5G61560_at 4.41570970267584 5.12439208768661 6.3746850980627 6.44142249810734 6.3801266750712 5.9471136707733 4.82779121182676 4.51849201173727 5.17093067808897 4.84409603688725 5.49884576204613 4.99274741338754 5.34126718224424 5.07469219921193 4.65346656389326 5.7191014595706 4.98602022964397 4.73403123279316 5.34137902414940 0.187165430632243 0.184152813197505 0.186609322623142 0.183432310016551 0.190677089014831 0.196595388407152 0.184281414843886 0.189759055995815 0.199994194405582 0.185126318300929 0.182506654106396 0.182813675798232 0.182200571214191 0.185058478029329 0.187513838062206 0.181984976909069 0.188858409183468 0.186306935350852 0.183963158031946 5 5 + 24773087 24773636 24773298.727 24770094 24773944 + gene protein_coding_gene TRUE TRUE AT5G61560.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61550.1); similar to U-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93477.1); similar to Os10g0561500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065387.1); similar to Os06g0140800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056754.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain U box; (InterPro:IPR003613) -0.179510975806678 -1.45424141780723 0.174891650858689 1 1.01937324117229 10.625628328688 -0.179510975806678 0.153799830130081 AT5G57000_at 4.62987394115436 5.13922415402907 5.92835842727255 6.03367680687911 6.27317105110722 6.18175166776443 5.15566322383094 5.41475551911493 5.44048504256474 4.99190272143391 6.39261030586578 5.88251087564705 5.37043696899552 6.42268858962876 5.5938486460294 6.01588783549067 5.51054026167115 5.67755448198311 5.1456891567188 0.218227877505600 0.218017373690476 0.217998565605834 0.222363899416638 0.216674842722827 0.223476963568501 0.217957925323487 0.213589410321997 0.215134878818068 0.214524911810751 0.224182199958821 0.213589410321997 0.222219447087552 0.21830652498907 0.216667785636241 0.213589410321997 0.219001053288403 0.215065458244588 0.220118903805420 5 5 - 23081113 23082404 23081498.182 23080941 23082576 - gene protein_coding_gene TRUE TRUE AT5G57000.1|AT5G57000.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to Os09g0363700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062994.1) -0.146948651896948 -1.45412225728831 0.174923983059352 1 1.01922832012262 11.1200353751789 -0.146948651896948 0.101796149162733 AT5G48420_at 0.70986759084895 0.731053497283847 1.4492803545105 1.10529634167157 1.04023091451890 0.96817860563774 0.97056195741165 0.822089460026295 0.683057506502359 0.560573584725102 0.924402828034534 0.833571755306251 1.03306096075883 0.858465159411875 0.702424764413787 0.643119021907656 1.04539307576386 1.09630861615486 1.28326525815435 0.218382585759861 0.220399373354573 0.214322728164741 0.214322728164741 0.223292313506618 0.214322728164741 0.221807346182261 0.217142482287894 0.222606289961476 0.231171795040786 0.218352432144120 0.217852710691232 0.232673212869096 0.217548512849526 0.216461147220733 0.222885916594902 0.221754333699234 0.218431301563078 0.227783137111692 5 5 - 19643601 19643990 19643832.545 19643588 19644016 - gene protein_coding_gene TRUE TRUE AT5G48420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34630.1) 0.129321508185946 1.45057555410232 0.175888663524010 1 1.01491835727917 1.84176586816179 0.129321508185946 0.066126236721948 AT5G13540_at 6.40850332248614 6.09563619087473 7.33254674246194 7.2571433255458 7.45680341340669 7.0329422239481 5.91800544568071 5.51889137198317 5.94394847532999 6.02040688642313 6.9342540659229 7.08471686718172 7.06011012120375 7.28984679530796 6.88534777591149 7.2635726912827 7.35012609502516 7.01042514776361 6.02077006380402 0.167728630202097 0.174300924125661 0.171956528744508 0.170018133491131 0.173878567058757 0.179215616546384 0.170886048880649 0.174612489472025 0.173678097378220 0.172888327049360 0.167572063985954 0.170975619678985 0.172870226896518 0.180087009443378 0.169129087658127 0.167572063985954 0.169868889345805 0.167572063985954 0.172110292702103 5 5 + 4353806 4354321 4354021.909 4351396 4354684 + gene protein_coding_gene TRUE TRUE AT5G13540.1|AT5G13540.2 Stone et al. (Plant Cell, 2007, PubMed ID 17194765) suggested that this locus is misannotated, with a full open reading frame ORF likely encompassing both the At5g13530 and At5g13540 loci. The misannotation will be corrected with the next Arabidopsis genome release (TAIR8). At5g13530 and At5g13540 together encode KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. Please see AT5G13530 for annotation details. similar to Ankyrin [Medicago truncatula] (GB:ABE94419.1)|similar to kinase [Arabidopsis thaliana] (TAIR:AT4G32250.3); similar to putative protein-related [Medicago truncatula] (GB:ABE84393.1); similar to Ankyrin [Medicago truncatula] (GB:ABE94419.1); contains domain SERINE/THREONINE PROTEIN KINASE (PTHR22967); contains domain PROTEIN KINASE (PTHR22967:SF2) 0.153971782087759 1.44812222307009 0.176558610301873 1 1.01194100895615 13.1799798812829 0.153971782087759 0.115119972456252 AT5G09740_at 5.01949906625898 5.66008470129687 5.65596523192839 6.35856958477061 7.12621981852413 6.68230882466612 5.26099690180365 5.5573126633593 5.57561172960511 4.9129718089907 6.86955791147492 6.88690212765695 6.22773986564821 6.98241945546776 6.36057041112087 6.68460126040136 6.1697680656323 6.41283863441087 5.127765251983 0.241690797229587 0.226115061320908 0.235006593244085 0.231327261472324 0.227691981231262 0.236920178392707 0.242513261919665 0.227738172066506 0.241639455485056 0.234911635997330 0.226074224520675 0.230371645671769 0.227712691212071 0.232956123232715 0.236714372173820 0.227242320079973 0.234751242598401 0.228919195701991 0.231874572917681 5 5|0 -|/ 3022208 3022961 3022524 3021953 3024757 - gene protein_coding_gene TRUE TRUE AT5G09740.1|AT5G09740.2 histone acetyltransferase, putative Identical to Probable MYST-like histone acetyltransferase 2 (EC 2.3.1.48) (HAG5) [Arabidopsis Thaliana] (GB:Q9LXD7;GB:Q8GZ97;GB:Q8LCD4); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G64610.1); similar to MYST-type acetyltransferase [Solanum chacoense] (GB:AAQ24535.1); similar to 181 [Daucus carota] (GB:BAA32822.1); similar to histone aceytl-transferase HAC108 [Zea mays] (GB:AAL33649.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|Identical to Probable MYST-like histone acetyltransferase 2 (EC 2.3.1.48) (HAG5) [Arabidopsis Thaliana] (GB:Q9LXD7;GB:Q8GZ97;GB:Q8LCD4); similar to histone acetyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G64610.1); similar to histone acetyltransferase protein HAC108 [Zea mays] (GB:AAM89290.1); similar to histone aceytl-transferase HAC108 [Zea mays] (GB:AAL33649.1); contains InterPro domain MOZ/SAS-like protein; (InterPro:IPR002717); contains InterPro domain Chromo; (InterPro:IPR000953); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.203484381093526 1.44775517226239 0.176659030378547 1 1.01149583625650 11.8049942557441 0.203484381093526 0.188690129748958 AT5G07050_at 2.01146109436511 1.85688320818328 2.13218958797444 2.42313553588098 1.58597900856078 1.97464348089379 1.78399515357221 1.83691226609845 1.98711849554263 2.06083498916376 1.7327204061843 1.76721272605397 1.78966422819936 2.1224031474564 2.25291180301699 1.94536848730818 1.77683880104690 2.23656966627623 2.12565900390273 0.202234710048826 0.199697913102514 0.205804799985706 0.208111980482107 0.206089927494257 0.203631720921402 0.200374769569052 0.203357977477452 0.208242907156340 0.201816089888231 0.203487050852958 0.204056571853389 0.203788776479770 0.204744000486125 0.212283810341506 0.204567188506578 0.21150431732922 0.205083353171977 0.222009733702624 5 5|0 -|/ 2191566 2192259 2192000.9 2191386 2193409 - gene protein_coding_gene TRUE TRUE AT5G07050.1 nodulin MtN21 family protein similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT2G40900.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE78418.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) -0.139333593463698 -1.44748429395413 0.176733170245884 1 1.01116735154900 3.95606591080571 -0.139333593463698 0.0886479437279797 AT5G47520_at 5.67681812617033 5.79765366437449 6.49512726377946 6.38013574991653 6.72135522835097 6.82305998208627 5.48885813208997 5.72867597470883 5.76039671925767 5.43477784817637 7.01220988694826 7.68154249825568 7.10489364802745 6.9587543207391 7.46673604157796 6.66920428194102 6.61146651577084 6.79025345391496 5.70896143590671 0.207969249251147 0.218951543496365 0.223250865853007 0.207180521511190 0.218361535387437 0.213415881863079 0.214503998800774 0.206106365787052 0.207822537038204 0.209422668642635 0.213917492802609 0.203037762731806 0.203551464714247 0.202367001829939 0.215190113960863 0.202367001829939 0.213965127586868 0.215097170065705 0.202367001829939 5 5|0 -|/ 19294855 19295337 19295105.6 19294588 19296963 - gene protein_coding_gene TRUE TRUE AT5G47520.1 AtRABA5a (Arabidopsis Rab GTPase homolog A5a); GTP binding similar to AtRABA5d (Arabidopsis Rab GTPase homolog A5d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G31680.1); similar to Ras-related GTP-binding protein, putative [Brassica oleracea] (GB:ABD64936.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.124317745805054 1.44729244788676 0.176785694918450 1 1.01093473036233 12.4747578061898 0.124317745805054 0.0535297910734604 AT5G66150_at 1.12524232994822 1.07122862725466 1.31343210113546 1.21791697335246 0.98568236096033 0.883818158433249 1.17080573415230 1.03632717315484 1.46146083427232 1.07530895143834 0.971647907043323 1.06863495408487 1.18287869898506 1.11146958709428 1.11865003047801 0.895303552557244 1.1294394679438 1.22077190078323 0.99887190781901 0.188229237830465 0.186876721361939 0.186636836239383 0.189288249022556 0.188775103824901 0.187878520209545 0.200592070760324 0.186892465221834 0.196418141370619 0.191617959347693 0.184014330884806 0.195434008301711 0.187387556152786 0.184812986212287 0.191060621249928 0.192850408008426 0.186025895664817 0.203003773062237 0.190054006039147 5 5|0 -|/ 26456280 26457033 26456598 26456239 26461660 - gene protein_coding_gene TRUE TRUE AT5G66150.1 glycosyl hydrolase family 38 protein similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT3G26720.1); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G13980.2); similar to Glycosyl hydrolases family 38 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22500.1); similar to Glycosyl hydrolases family 38 C-terminal domain, putative [Medicago truncatula] (GB:ABE88173.1); similar to glycosyl hydrolase family 38 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG65906.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Glycosyl hydrolases 38, C-terminal; (InterPro:IPR011682); contains InterPro domain Glycoside hydrolase, family 38; (InterPro:IPR000602) -0.118929343741638 -1.44718245277834 0.176815815995304 1 1.01080136573300 2.23350505407283 -0.118929343741638 0.0348271893246790 AT5G67560_at 8.5802444483046 8.78553687231904 9.32411076590522 9.39188653489321 10.2767263318746 9.31091038932936 9.06588893252455 9.02215647757603 8.82218009039562 8.58689774885069 10.1068212540848 9.83667308704706 9.84560705329342 9.97305844206525 9.53348985574714 9.616895741517 9.13928088217484 9.73089353618671 8.24083471441856 0.161029404533804 0.154631754112533 0.161011676953737 0.155653359169780 0.160544563627911 0.167229895742407 0.164322591842334 0.160808553820482 0.183125574951497 0.162633885380366 0.157525866968053 0.158462682098492 0.153131621172946 0.163833481052372 0.159660019777229 0.158625380841123 0.179707069724519 0.164550762388462 0.163031615352895 5 5|0 +|/ 26967811 26969049 26968664.875 26967535 26969424 + gene protein_coding_gene TRUE TRUE AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. similar to ATARLA1C (ADP-ribosylation factor-like A1C), GTP binding [Arabidopsis thaliana] (TAIR:AT3G49870.1); similar to protein tyrosine phosphatase, non-receptor type 7 [Gallus gallus] (GB:NP_001012886.1); similar to Os03g0200800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049292.1); similar to ADP-ribosylation factor-like 10B [Xenopus tropicalis] (GB:NP_988990.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.190784202949145 1.44605916880001 0.177123667138027 1 1.00943980196907 18.3560880104589 0.190784202949145 0.171442199110506 AT5G37850_at 9.01587149319392 9.10081345500163 9.70751214716462 9.47446277977816 9.94613074482905 9.44234497466945 9.03881429019809 8.81781118079247 8.41745141574206 8.48479171352803 9.13902249889419 9.24537116771425 9.05911657833187 9.10110824955163 8.83963165266143 9.1461742652527 9.10590986871627 8.87999061471538 8.51149175841271 0.156217722399084 0.155080126361256 0.152433470389692 0.162100165942145 0.151406600581017 0.154655813832659 0.151588296975788 0.150859947800347 0.164002064489959 0.159730569591491 0.152711336974433 0.147361601260675 0.15086799071339 0.161099403891177 0.155132866911421 0.147782412870806 0.158680686951099 0.161060511494208 0.153456988559651 5 5|0 +|/ 15084394 15085966 15085352.25 15082604 15086229 + gene protein_coding_gene TRUE TRUE AT5G37850.1|AT5G37850.2 SOS4 (SALT OVERLY SENSITIVE 4); kinase|SOS4 (SALT OVERLY SENSITIVE 4) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+. Identical to Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase) (Pyridoxal kinase- like protein SOS4) (Salt overly sensitive 4) (PK) [Arabidopsis Thaliana] (GB:Q8W1X2;GB:Q94EN4;GB:Q9FKE1); similar to TH1 (THIAMINE REQUIRING 1), phosphomethylpyrimidine kinase/ thiamin-phosphate diphosphorylase [Arabidopsis thaliana] (TAIR:AT1G22940.1); similar to Pyridoxal kinase [Medicago truncatula] (GB:ABE83533.1); contains InterPro domain Pyridoxal kinase; (InterPro:IPR004625); contains InterPro domain Phosphomethylpyrimidine kinase type-1; (InterPro:IPR013749) -0.147495876535624 -1.44506853192802 0.177395544051805 1 1.00823958725525 18.0858629204737 -0.147495876535624 0.104432377475337 AT5G34850_at 10.5130749310613 10.5694341235205 11.6479894699185 11.5480392236023 11.4924326639765 11.4116764533531 11.0579382543151 11.1470862402463 10.9201707308954 10.9800060632078 11.4509998083729 11.3832127734263 11.7737528309404 11.5393097264251 11.5186480923561 11.5725489808864 11.6364261150825 11.8363773841591 10.8981913966751 0.0704256452228651 0.0675166774242906 0.0661945495388638 0.0648768711632054 0.0672610623212908 0.0668788756742225 0.0696069614411975 0.0651545361242598 0.0648510284513226 0.0661572438806752 0.0652984665054229 0.0660990817963791 0.0637797022147073 0.0702997122490054 0.0665011703192345 0.0642010909277997 0.0729577592115876 0.0640239467898551 0.0684407251917188 5 0|5 /|- 13125917 13126784 13126363.625 13125384 13128861 - gene protein_coding_gene TRUE TRUE AT5G34850.1 ATPAP26/PAP26 (purple acid phosphatase 26); acid phosphatase/ protein serine/threonine phosphatase similar to PAP1 (PURPLE ACID PHOSPHATASE 1), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G27190.1); similar to purple acid phosphatase-like protein [Glycine max] (GB:AAN85416.1); similar to acid phosphatase [Lupinus luteus] (GB:CAD30328.1); similar to Metallophosphoesterase [Medicago truncatula] (GB:ABE78365.1); contains InterPro domain Fibronectin, type III-like fold; (InterPro:IPR008957); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.117447989268504 1.4448229943145 0.177462986056043 1 1.00794218580152 22.4343083504403 0.117447989268504 0.0287683999782386 AT5G06250_at 1.29928642584306 0.97802124196412 0.89161659827618 1.17768784820076 0.641904086192904 0.571750924381516 0.624699828696857 1.07732633784866 1.32135048961207 0.887243598240715 1.17384681311865 0.601647087025538 1.20414757871123 0.685483252169447 0.980059851824334 0.990880339423628 1.08795377269283 1.24640314797083 0.776753598885664 0.265844989104979 0.26275485556804 0.287320126184864 0.266995322072122 0.265638675558257 0.278928760050392 0.26275485556804 0.299344654911174 0.28114710832837 0.277621162533990 0.263252928172936 0.268498712899336 0.283748903555391 0.26275485556804 0.26275485556804 0.270949688760725 0.26275485556804 0.26275485556804 0.26275485556804 5 5 - 1892742 1893786 1893228 1892715 1894125 - gene protein_coding_gene TRUE TRUE AT5G06250.1 transcription factor similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G11580.1); similar to Os03g0120900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048792.1); similar to putative DNA-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM76357.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.149774859354736 -1.44353656505273 0.177816688210699 1 1.0063845610575 1.90349597439878 -0.149774859354736 0.108741180976351 AT5G65480_at 10.7196559343733 11.1825176057690 11.4462763449727 11.6878254059056 12.0059652264856 11.6412829652029 11.2121969990205 11.2660234062543 11.2986405628894 11.4885667505844 11.8713460059061 11.4302254154834 11.7778122372450 11.7981698231474 11.0185732353649 11.6432368443146 11.2889488398072 11.6733275879796 11.3360808292634 0.120672235712209 0.111938011922006 0.126280970169577 0.116254062037880 0.121190532770626 0.115574649341726 0.122244033243948 0.113266326706012 0.124007274514353 0.111480415223964 0.113958752367698 0.111480415223964 0.111480415223964 0.116543296579764 0.130096760681387 0.112660709402475 0.137694656432930 0.120546115784282 0.111480415223964 5 5 + 26194065 26194633 26194317.455 26193247 26195143 + gene protein_coding_gene TRUE TRUE AT5G65480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G38060.2); similar to unknown [Lycopersicon esculentum] (GB:AAK84476.1) -0.150824650816998 -1.44334131555838 0.177870424346773 1 1.0061482285535 22.8637851757822 -0.150824650816998 0.110603094102160 AT5G43820_at 3.98170483502571 4.05854551004171 5.03435080046273 5.18855163742801 5.38052994020951 5.08928576285996 4.18819667789815 3.7018687948471 4.06550223708522 3.63869225914725 4.5275394488157 4.68815086212708 4.71197859067428 4.89455097185547 4.51998654921105 4.91480253071492 5.37481920814636 4.86584020949917 4.35192670989858 0.214921526778591 0.212279037648992 0.222465274220054 0.224850944153413 0.220493921957539 0.224218315223741 0.218014488817668 0.226502360719742 0.229070088755643 0.220039634906520 0.213025492659767 0.212279037648992 0.217088357648373 0.216037646908301 0.214786865852698 0.215298878739229 0.227539395299498 0.222187429189776 0.215041816880092 5 5|0 +|/ 17637661 17638908 17638386.7 17636175 17639095 + gene protein_coding_gene TRUE TRUE AT5G43820.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G15010.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE81252.1); similar to Os03g0761300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051352.1); similar to Os02g0304800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046632.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.146124454284601 1.44197199467345 0.17824767512619 1 1.00449136334127 8.99333705239204 0.146124454284601 0.102529648068638 AT5G17130_at 2.05675388036187 2.16059387366335 2.28286468979799 2.26410007839186 2.01479275232175 2.17699603240692 1.76308392355747 2.31064291647030 2.24594197770399 2.36060775607133 2.14941828989009 2.20591554645566 2.67763600084207 2.61838476729279 2.24629232379388 2.5160169570897 2.28207698983524 2.19301690168398 2.39024577155001 0.187281109404863 0.187768592997819 0.187071530249840 0.186777699388343 0.180646756124462 0.181459950222228 0.186295918890300 0.184423367431211 0.197697179118615 0.184790024908558 0.181103267001961 0.182953375904068 0.191696435589688 0.185454068374195 0.182578098252200 0.184689999300888 0.189028801697133 0.187768464823293 0.183184915558241 5 5|0 +|/ 5636977 5637500 5637268.1 5636975 5637537 + gene protein_coding_gene TRUE TRUE AT5G17130.1 similar to cathepsin-related [Arabidopsis thaliana] (TAIR:AT5G17080.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128) -0.145004001089744 -1.44188973518528 0.178270359495649 1 1.00439186239975 4.47540846364754 -0.145004001089744 0.100500758066974 AT5G61710_at 1.13623870993079 1.25488449386025 1.84055939013804 1.91663379222428 1.17431140154382 1.56253059495548 1.51683091013034 1.41437060280321 2.14449274647744 1.92632492642983 1.15635982000288 1.79916162744496 1.44838651511355 1.18501656720775 1.57119974636705 1.65390709845637 1.56654728108656 2.57560531743345 1.7470798876701 0.253000495227287 0.2524625507359 0.247882232154036 0.247882232154036 0.247882232154036 0.252832122750583 0.261061085019786 0.25121664704826 0.250425031758539 0.258188832878686 0.255549920020089 0.256001163152692 0.255442400449602 0.251838156079467 0.2570620422631 0.255012858675029 0.253031661931629 0.258966693678262 0.256564964726205 5 5 + 24817349 24817648 24817453 24817104 24817906 + gene protein_coding_gene TRUE TRUE AT5G61710.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02160.1) -0.131566370359091 -1.44022387611837 0.178730276660419 1 1.00237762938437 3.25645607869737 -0.131566370359091 0.073640075638723 AT5G15320_at 6.52580614623245 7.4696632767704 7.76457787930727 7.851486075286 8.1511457438046 6.52465998219189 8.1389744424339 7.80346437966857 7.2099478727855 7.82608225944134 8.898726746217 9.4704512679668 8.39222463258737 9.01865208050641 8.45679408821972 8.89377951826804 8.00122935793075 8.53693065660015 7.58993681279266 0.282026741379696 0.254346105790725 0.278762747192099 0.271244211564447 0.257978791095517 0.289111030761652 0.262080149687063 0.262986420094473 0.300509187123369 0.257693349763947 0.259730287055865 0.266065992333000 0.261949483127216 0.254346105790725 0.270361196186318 0.254346105790725 0.32550068522754 0.264208419142394 0.254346105790725 5 5 + 4977843 4978728 4978608 4977538 4978897 + gene protein_coding_gene TRUE TRUE AT5G15320.1|AT5G15320.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01130.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79949.1) -0.314473151992922 -1.44000072537227 0.178791961773054 1 1.00210792612181 15.654016003317 -0.314473151992922 0.330912115023908 AT5G46400_at 3.82052345993126 3.99932012526825 4.62637016815684 4.97742184269852 5.3968482468197 4.80678732432892 4.13474805821587 3.33716231248472 3.54954090046738 3.85959333240672 4.49779508493781 4.8157946330417 4.48231295211743 4.74075489450435 4.54708287255342 5.24930058742053 4.68800250520314 4.33203073857825 3.93354533367801 0.203232697026069 0.20428905244666 0.200533846911275 0.200907755565173 0.215181524862672 0.213489059106412 0.203057356117309 0.209049975691798 0.207837944826922 0.205739983466643 0.200419565857058 0.200419565857058 0.20239871641682 0.204006801218967 0.212235509620088 0.200419565857058 0.208080468650033 0.212741962295249 0.200663160413968 5 5 + 18841038 18841541 18841279.909 18837259 18841877 + gene protein_coding_gene TRUE TRUE AT5G46400.1 binding similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G04080.1); similar to Involucrin repeat; RNA-processing protein, HAT helix [Medicago truncatula] (GB:ABE92782.1); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.199494375651234 1.43987158775650 0.178827667312202 1 1.00195186082165 8.61241142843565 0.199494375651234 0.184732950960149 AT5G64280_at 7.38714162640034 7.50794933441593 8.23187472950526 8.43110378503486 8.57452257230334 8.48608087313623 7.63152095152564 7.7716573927062 7.97604335415392 7.90413485485262 8.73541566292425 8.40039028087373 8.56536479472032 8.71512663578745 8.2875824005184 8.89570321501619 8.6744012422818 8.68548147872136 7.91374931395139 0.159851857204773 0.145172236313812 0.149712792516646 0.147213431580936 0.145076962480784 0.147506812078274 0.144707133405492 0.144491605717273 0.148592882022783 0.139888634325029 0.144053842546963 0.150054151285861 0.13996396981175 0.147492430579334 0.144962372659946 0.146346309654786 0.162694795310791 0.143094394523484 0.146962340435992 5 5 - 25728618 25729193 25728932.818 25728295 25730699 - gene protein_coding_gene TRUE TRUE AT5G64280.1 DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2); oxoglutarate:malate antiporter similar to DCT/DIT2.1 (DICARBOXYLATE TRANSPORT), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64290.1); similar to plastidic general dicarboxylate transporter [Zea mays] (GB:BAD06220.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) -0.122271849074267 -1.43894030290181 0.179085340242380 1 1.00082665253972 16.2783526022158 -0.122271849074267 0.0494787692419328 AT5G19610_at 0.842347370499411 1.27654521117037 0.524563834841742 0.580996752724327 0.821918959990016 0.79258630764188 0.820595128336048 0.438345084709160 0.362165760747659 0.895975894146089 0.748929149091736 0.973311545297795 0.740905272501859 0.6577176614755 0.991917303710168 0.530032576277083 0.61571054151696 0.533418821751034 0.962709273918887 0.218599674985788 0.217955892006412 0.230842055649328 0.220867965864892 0.222790484578820 0.215168455848195 0.220933219814101 0.215812492563856 0.217032056598001 0.218018757560698 0.215266222168767 0.220307548245128 0.220215246456066 0.215168455848195 0.216479999321600 0.220816570878968 0.218592403587621 0.222177842982434 0.225366544981645 5 5 - 6617771 6618319 6618091.182 6617748 6622047 - gene protein_coding_gene TRUE TRUE AT5G19610.1 sec7 domain-containing protein similar to GN (GNOM) [Arabidopsis thaliana] (TAIR:AT1G13980.1); similar to pattern formation protein, putative [Arabidopsis thaliana] (TAIR:AT5G39500.1); similar to putative pattern formation protein GNOM [Oryza sativa (japonica cultivar-group)] (GB:BAD15695.1); similar to H0207B04.10 [Oryza sativa (indica cultivar-group)] (GB:CAH65909.1); similar to GNOM gene product (GB:AAA91150.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) -0.144735393841774 -1.43807433167064 0.179325225620036 1 0.99978077998763 1.49437558218427 -0.144735393841774 0.100712452981117 AT5G44320_at 8.33907885158168 8.71622762680499 8.96006451448525 9.17067891370961 9.19486635664672 9.05849091456614 8.23626686303164 8.30239971959056 7.99328267235078 7.9853438011867 8.90347409828352 9.0534652296108 8.9750473426907 8.61836100458942 8.94751879167017 8.86194449975769 8.6553848548433 8.54552469927562 8.41570422584246 0.122834111822983 0.119231403218175 0.125737530330138 0.125036138973622 0.125739626600279 0.127281513728472 0.129903950173335 0.119231403218175 0.136658868327769 0.128507057521782 0.122776927475517 0.119491947074155 0.121250930545932 0.132859137624025 0.125002004908116 0.122273840878738 0.129241057829288 0.127255469479439 0.12971314421761 5 5 - 17872163 17872662 17872369.182 17871816 17873907 - gene protein_coding_gene TRUE TRUE AT5G44320.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT4G20980.3); similar to eukaryotic translation initiation factor 3 (eIF-3), putative [Musa acuminata] (GB:ABF69959.1); similar to Os05g0566500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056343.1); similar to putative eukaryotic translation initiation factor (eIF3d) [Oryza sativa (japonica cultivar-group)] (GB:AAU10658.1); contains InterPro domain Eukaryotic translation initiation factor 3, subunit 7; (InterPro:IPR007783) -0.133844738157455 -1.43763957387705 0.179445762398829 1 0.999255856701384 17.2230260358271 -0.133844738157455 0.0792226483577721 AT5G65620_at 10.0548988523590 9.9920121878559 10.9096898717322 10.7204719137266 10.5589054400887 10.4673686030353 9.6834504856698 9.78092915537211 10.1213886915076 10.0375609492807 10.7649910822521 10.8156057847939 10.7194158245498 10.7118114756967 10.7321144098964 10.8886076367457 10.4375532114792 10.817476441611 9.86611460173983 0.0705244936270738 0.0728584446984359 0.072246096467361 0.0735752334554517 0.0732728458172558 0.0731883531175234 0.0777553607688972 0.0751127419906081 0.0721783639254138 0.0733374284736814 0.0731358977348517 0.0705254412745446 0.0768455220664188 0.0802709530544628 0.0718731851551359 0.0714388584642361 0.0770124835427201 0.0758932414336753 0.0733690045569763 5 5|0 +|/ 26241907 26242790 26242378.857 26239158 26243129 + gene protein_coding_gene TRUE TRUE AT5G65620.1 peptidase M3 family protein / thimet oligopeptidase family protein similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT5G10540.1); similar to Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Medicago truncatula] (GB:ABE84181.1); similar to oligopeptidase A [Nostoc sp. PCC 7120] (GB:NP_484923.1); similar to Peptidase M3A and M3B, thimet/oligopeptidase F [Anabaena variabilis ATCC 29413] (GB:YP_324977.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567) 0.119776962850769 1.43700055437117 0.179623056078670 1 0.998484495514621 20.6431166791737 0.119776962850769 0.0415472683735021 AT5G66080_at 2.43149285408437 2.42258821452161 2.02420358993611 1.86985044391888 2.25387964594546 2.84949057206791 1.87486492865010 2.30685899046321 2.62960632893284 3.01485928983818 3.33730084739778 3.48771413966205 3.78676092817225 3.20822137130811 3.6568381278468 3.12026191503796 2.90958276767745 2.49954943716200 3.09951554252274 0.217801161357437 0.220309648279715 0.223847783386526 0.223069655326692 0.216508880534289 0.227511197064001 0.220395307566591 0.236419833033147 0.219428880898272 0.218568754022879 0.226734767914187 0.217100967813882 0.23028094871541 0.232112971782422 0.218501925461308 0.225649798144266 0.216508880534289 0.229115674771491 0.2209842852976 5 5 - 26440826 26441596 26441211.636 26440645 26442632 - gene protein_coding_gene TRUE TRUE AT5G66080.1 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G51370.1); similar to protein phosphatase 2c-like protein [Thellun (GB:AAM19705.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.161692733103558 -1.43508520456576 0.180155356903949 1 0.996173803035258 5.33687319438894 -0.161692733103558 0.130110804711913 AT5G64410_at 8.80400678676827 9.13763562004988 9.58963834291583 9.56056524648662 9.7771120996963 9.5628121778227 6.95294086642552 7.46571504669149 9.3872443560395 8.80848663745355 9.76776179732658 9.51942958050354 9.52501694154675 9.65168125381328 8.8945084513575 9.92085585118113 8.80926736286757 9.21681739805114 9.13565231305352 0.166325340850921 0.162863193149976 0.165165074158454 0.165297615102290 0.162141551398016 0.175808833183648 0.168278213099386 0.170353618091102 0.178900104871428 0.171201808561689 0.162583045337174 0.161070389181119 0.159418832989827 0.162536951127799 0.159159623890045 0.163013924451859 0.170734454565497 0.168691466336374 0.161516072923485 5 5 - 25768253 25768627 25768425.091 25768071 25772278 - gene protein_coding_gene TRUE TRUE AT5G64410.1 ATOPT4 (oligopeptide transporter 4); oligopeptide transporter oligopeptide transporter Identical to Oligopeptide transporter 4 (AtOPT4) (OPT4) [Arabidopsis Thaliana] (GB:Q9FME8;GB:Q8LBQ6); similar to ATOPT2 (oligopeptide transporter 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G09930.1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT8 (oligopeptide transporter 8), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53520.1); similar to putative sexual differentiation process protein isp4 [Oryza sativa (japonica cultivar-group)] (GB:BAD08158.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE92893.1); similar to Peptidase aspartic, active site; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE84685.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) 0.15087568073574 1.43453565822341 0.180308330735828 1 0.995511194330003 18.1181174892386 0.15087568073574 0.112287710439497 AT5G66430_at 0.210557234486276 0.287197191218788 0.110609802917383 0.418037827126888 0.401538801475452 0.158312772616119 0.170167968337367 0.0812323790833562 0.0420683254187841 -0.046148213181055 0.280291780911685 -0.0696901623692095 0.364468456618599 0.704509282596172 0.168780167592369 -0.154283010843485 0.29178875621514 0.552592190441392 -0.00847824092339081 0.202701037765069 0.1996980126093 0.201965124300857 0.206291218421278 0.200419951940274 0.203298649609006 0.207118709252471 0.200258007248184 0.206963372728037 0.203555819923714 0.198481021408764 0.203229474291928 0.221358488585309 0.206284549306164 0.208850611722454 0.207255505329869 0.204302683023544 0.202941584447906 0.202623207574468 5 5 - 26542644 26543303 26542927.636 26542636 26544025 - gene protein_coding_gene TRUE TRUE AT5G66430.1 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G04370.2); similar to carboxyl methyltransferase [Bixa orellana] (GB:CAD70190.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.129811712792256 1.43433184444504 0.180365093220870 1 0.995265490152166 0.361267317032760 0.129811712792256 0.0708159715547532 AT5G51440_at 1.38586064329957 1.43030160102300 1.31183302702516 1.34097168450040 1.44955728514549 1.44181058287669 1.26952640073577 1.24767534678626 1.39722878081311 1.71394843913844 1.27283072628901 1.23285679635809 1.59352961095376 1.36659159612167 1.50269460716649 1.85544577179373 1.49368627065521 2.08710392451519 1.76950936118882 0.202090629209233 0.195430843867347 0.200662567424941 0.199258484963349 0.202425167543307 0.197556031841142 0.206624542244876 0.20123719554713 0.209993370200969 0.200330396180231 0.197684669083275 0.197413814148492 0.196827217873101 0.198613008362102 0.204640602943713 0.199096382593771 0.201068654918489 0.198503712859985 0.202455295136327 5 5|0 +|/ 20908577 20909204 20908836.333 20908389 20909437 + gene protein_coding_gene TRUE TRUE AT5G51440.1 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) similar to ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) [Arabidopsis thaliana] (TAIR:AT4G25200.1); similar to LMW heat shock protein [Euphorbia esula] (GB:AAF37726.1); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) -0.114071174490691 -1.43340576019213 0.180623200841147 1 0.994149350046693 2.94843604143826 -0.114071174490691 0.010033499933581 AT5G50120_at 1.98170311120164 1.53653635933521 1.59919370447334 1.70922586305919 1.92335933561382 1.71088208876283 1.68445629488285 1.88039506500838 2.12006793600903 2.14399511879011 2.28588280706786 2.22777591799443 2.05434138465356 1.69878287575769 1.69994547839288 2.28274059074213 2.20934626604956 2.08702721149591 1.75997852991313 0.20313398984176 0.203784019582298 0.193434952537158 0.197682883515717 0.193527050508013 0.195952904712621 0.197798852442483 0.197779561343723 0.193328058031746 0.203134224751467 0.203862817697989 0.198308859386798 0.197465985318313 0.195625881635830 0.193328058031746 0.198849318537349 0.204301240324092 0.210515288904199 0.203661228830390 5 5 - 20399856 20400427 20400134.727 20399841 20401100 - gene protein_coding_gene TRUE TRUE AT5G50120.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G24130.1); similar to WD40-like [Medicago truncatula] (GB:ABE82381.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) -0.140517051432611 -1.4325438144015 0.180863714846648 1 0.99311093089601 3.79134106683716 -0.140517051432611 0.0938044229814313 AT5G27560_at 9.73794956088357 9.791190784922 10.2695883119717 10.1936450699740 10.4303811404082 10.3210431229360 10.1587702531148 10.2289719873942 9.76895172676834 10.0857789645548 10.6184351938537 10.6962751606345 10.7227754997210 10.5783494622816 10.6570375200076 11.0275266135042 10.6193409584352 10.5859692467539 10.0104492606791 0.0860234460319249 0.0808944133382336 0.0808944133382336 0.0847404557841483 0.0812264437771702 0.0861101912860472 0.083007105212455 0.0808944133382336 0.0877690708744095 0.0864187531996797 0.086864706854249 0.0810569335017409 0.0818612342252033 0.0871479672706097 0.0881981115623672 0.0829223483657177 0.0872768294576672 0.0817460875577181 0.0856747740790443 5 5|0 +|/ 9732630 9733599 9733147.1 9731605 9733921 + gene protein_coding_gene TRUE TRUE AT5G27560.1 similar to Os06g0146300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056793.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54638.1); contains domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain (SSF55424) -0.116201516186364 -1.43212961460529 0.180979388437539 1 0.992612072541597 20.4630793744004 -0.116201516186364 0.0276265332004 AT5G49710_at 7.63248514166755 7.52029049174511 8.3979274666105 8.4567205930832 8.96546378565637 8.72913754002259 7.26715719969462 6.95504724685425 7.01224280067928 6.83000561835171 8.31028197399338 7.94227891789562 8.04890060677635 7.96370560561457 7.76729271221244 7.66885293336657 7.88679790027568 7.75977071192927 7.29736828424351 0.147271560402090 0.139180362368658 0.134955666885686 0.136323622048254 0.141769764025524 0.135816357636242 0.137575324667763 0.144257985797794 0.146497117460834 0.137467011275385 0.132539828740946 0.135758694300479 0.138447098077155 0.145815105141297 0.144821021603067 0.136738472302819 0.144312618180884 0.152381280233043 0.142555448582921 5 5|0 +|/ 20212872 20214438 20213680.111 20212636 20214579 + gene protein_coding_gene TRUE TRUE AT5G49710.1|AT5G49710.2|AT5G49710.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24590.1); similar to unknown protein [Primula vulgaris] (GB:ABB82569.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24590.1); similar to Os02g0781700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048312.1); similar to MADS box interactor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD19444.1) 0.129737742085209 1.43168236274902 0.181104363135395 1 0.992073511630439 15.4730407188415 0.129737742085209 0.0712066820921125 AT5G44860_at 5.74327692889822 6.18814567683398 7.02291244385992 7.79270332657461 8.10109182808556 7.57063338836555 5.89746519304292 6.57630503623991 5.50469395650756 5.6457616253366 6.47031035364712 6.62073906013154 6.80131639318357 6.6391513838853 6.62013884826977 7.24155636987273 6.96582272447741 6.79566618484497 6.12237474059753 0.235030904481404 0.231737834178301 0.241198085063535 0.234457067764915 0.234149398873252 0.231918165061060 0.237354376030340 0.237266009189734 0.248484098031933 0.230485575894850 0.229505637321774 0.226557283392896 0.227279132834836 0.233657298080143 0.235508048709254 0.226557283392896 0.237113388286986 0.232164863159802 0.230584696260479 5 5 - 18127952 18128479 18128232.455 18127685 18129039 - gene protein_coding_gene TRUE TRUE AT5G44860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19950.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90086.1); contains domain gb def: Hypothetical protein AT4g16850 (PTHR22597:SF10); contains domain FAMILY NOT NAMED (PTHR22597) 0.220144877861537 1.43158147799435 0.181132563305891 1 0.99195204574878 13.1250406138724 0.220144877861537 0.214245300854600 AT5G56570_at -0.210541057711798 0.474483510638781 0.294989138515135 0.352147387230733 0.326513339847512 0.342638470557507 0.123052272922546 0.179090106299141 0.226662682730169 0.150927252086083 -0.0950208413203933 0.342146552993267 0.92839555532828 0.578338541067449 0.570090432071887 0.261883146086093 0.607638033910972 0.532812584765000 0.371150738854372 0.219927440778841 0.223368883237954 0.221431795005492 0.225061426083642 0.226267029667942 0.222195339417041 0.219927440778841 0.219927440778841 0.228913347786499 0.2215271074578 0.224455119091781 0.219927440778841 0.219927440778841 0.223547884616178 0.228301726289288 0.222210146783037 0.234013714825889 0.228201392425388 0.232686607206846 5 5 + 22920785 22921562 22921111.727 22919962 22921822 + gene protein_coding_gene TRUE TRUE AT5G56570.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56560.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE92019.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596) 0.154644307404427 1.43071349651751 0.181375343245769 1 0.9909072199892 0.592979508622292 0.154644307404427 0.119385893998726 AT5G39870_at 0.926901727681277 0.87837779173664 1.36943927380880 1.38934020908937 1.10471116216026 1.47709691355079 1.06661022379482 1.14086705869681 1.11563166754703 1.70393651198063 1.83215972005438 1.6990585567403 1.72831551547546 1.33607960819558 1.11903420483860 1.18321140357372 1.31786358580769 1.59480866065985 1.32311613105621 0.193340585543741 0.191503749014064 0.191452561923785 0.186021978561401 0.183473438494641 0.184393413420188 0.192105125478602 0.193719643089631 0.193969791702643 0.196047235230012 0.184956659100895 0.187065292157144 0.189377381297568 0.189052516949582 0.194532232594498 0.191546720975772 0.187988888286651 0.194469480380641 0.191709707342356 5 5 - 15986192 15986941 15986530.727 15985850 15987239 - gene protein_coding_gene TRUE TRUE AT5G39870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28980.1); contains InterPro domain Protein of unknown function DUF1216; (InterPro:IPR009605) 0.127576128462735 1.43005472617356 0.181559790156672 1 0.99011450497321 2.59777363362126 0.127576128462735 0.066335679991971 AT5G22740_at 4.89434373339153 5.06651137630549 3.97039261120053 4.06662796507137 4.68618278863152 5.09220522226743 3.9614902553565 3.86758817145383 4.03895092473103 4.62422644936603 6.35008252853115 7.93518911736578 5.61650681684532 6.59788283997735 7.31041338887412 6.6311876571299 6.0170022649014 6.60550195623794 4.87968223122041 0.22028062768997 0.215604284795996 0.215604284795996 0.221488132348125 0.220529496296084 0.215604284795996 0.220790619147114 0.215836336206945 0.22489162910196 0.218134832471097 0.219076951371680 0.225954560628679 0.239302623782206 0.225456366725491 0.220007964157703 0.225157167591316 0.225325560985124 0.219410370567815 0.218924545000911 5 5|0 -|/ 7555411 7556045 7555720 7554931 7560076 - gene protein_coding_gene TRUE TRUE AT5G22740.1 ATCSLA02 (Cellulose synthase-like A2); transferase, transferring glycosyl groups encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein similar to ATCSLA15 (Cellulose synthase-like A15), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G13410.1); similar to ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G03760.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to glycosyltransferase 10 [Ipomoea trifida] (GB:AAQ62572.1); similar to glycosyltransferase 1 [Ipomoea trifida] (GB:AAQ62570.1); similar to Glycosyl transferase, family 2 [Medicago truncatula] (GB:ABE81491.1); contains InterPro domain Glycosyl transferase, family 2; (InterPro:IPR001173) 0.133389762294625 1.42995061866277 0.181588953459292 1 0.989989251460073 10.0242964436291 0.133389762294625 0.0797882895877169 AT5G52240_at 10.2394950638398 10.1071133767008 10.7124693456683 10.6400297622900 10.9445219611822 10.8083603014098 9.60263411776881 9.70726159611865 9.80847878419534 9.58164390602067 10.3503058689288 10.3241442907552 10.4194668623860 10.4005006674332 10.2435649234325 10.2480772126059 10.2011214670186 10.4100547323117 9.55425705574182 0.0940983274150754 0.0857367287944961 0.0946376776510868 0.092244981468244 0.094739398152878 0.0890197395300756 0.0918590994300382 0.0919991433355985 0.0927769484889899 0.0895183443451893 0.0869883577106978 0.0857367287944961 0.0865115198822568 0.085858733152622 0.0966299291617356 0.0857367287944961 0.0971889323133385 0.0877162850185355 0.0891500310607452 5 5 + 21230441 21231745 21231099.273 21230284 21231965 + gene protein_coding_gene TRUE TRUE AT5G52240.1 MSBP1 (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 5) Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. Identical to Membrane steroid-binding protein 1 (AtMP1) (MSBP1) [Arabidopsis Thaliana] (GB:Q9XFM6;GB:Q9LTJ7); similar to ATMP2 (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 3), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT3G48890.1); similar to putative steroid membrane binding protein [Triticum aestivum] (GB:ABB90550.1); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.118615841849782 1.42934957325991 0.181757400255452 1 0.989266239316772 20.3316262331698 0.118615841849782 0.0395608075664105 AT5G19330_at 7.255150977511 7.78750227766763 8.30606325582205 8.25745517437435 8.69561984237445 8.44325729446181 7.36978309494683 7.2520147580627 7.44918755409569 7.30381829810472 8.06458525127288 7.9719078621158 7.87109104144818 7.91865251807136 7.89960041503372 8.18905805360154 7.66292430375473 8.11425232156856 7.35548348193674 0.128948215831291 0.132559449562483 0.135004868904246 0.131618373369351 0.132976863850153 0.129105905246779 0.132060163168304 0.133229941629470 0.139359655704125 0.141851586256460 0.134099183808382 0.128147860546979 0.130817753354015 0.141390117435851 0.127485151743173 0.126914532611388 0.134217540622509 0.133134898645557 0.127038683779635 5 0|5 /|- 6508317 6509354 6508724.111 6507796 6512761 - gene protein_coding_gene TRUE TRUE AT5G19330.1|AT5G19330.2 armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G13060.1); similar to Neural adherens junction protein Plakophilin and related Armadillo repeat proteins (ISS) [Ostreococcus tauri] (GB:CAL58178.1); similar to Os05g0398100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055472.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069)|similar to armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G13060.1); similar to Neural adherens junction protein Plakophilin and related Armadillo repeat proteins (ISS) [Ostreococcus tauri] (GB:CAL58178.1); similar to Os05g0398100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055472.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) -0.145596963586282 -1.42712562587742 0.182381831021003 1 0.986592716663484 15.5863585421880 -0.145596963586282 0.104310037479692 AT5G02790_at 11.7650023139546 11.775147009414 12.6618122480539 12.3706590584454 12.6099322788610 12.2978730763657 12.3718406891693 12.0854293679237 11.4859833803333 11.8200477349873 12.3534989074143 12.2511221078399 12.5527046452944 12.5521178383247 12.0325349803773 12.5151795706283 12.6526423044277 12.4093495615492 11.6224162364150 0.0808872676345507 0.0780903107986849 0.0799437224977647 0.0794914190963176 0.0783207668677896 0.0800265579781366 0.0807494396835702 0.079530158581564 0.0933748907625522 0.0780903107986849 0.0790479814114429 0.0791383787727125 0.0780903107986849 0.0793463065941774 0.0789496978845343 0.0780903107986849 0.0841712328619625 0.0819508516884835 0.0800752718063776 5 5|0 +|/ 633518 634262 634010 632800 635123 + gene protein_coding_gene TRUE TRUE AT5G02790.1 In2-1 protein, putative similar to In2-1 protein, putative [Arabidopsis thaliana] (TAIR:AT5G02780.1); similar to In2-1 protein [Glycine max] (GB:AAG34872.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, omega-class; (InterPro:IPR005442); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.137260107488302 1.42430752727898 0.183175702241656 1 0.983208825429157 24.2710667669704 0.137260107488302 0.0889651600061006 AT5G52180_at 4.82767652764041 5.82783318113326 5.39981085491013 5.76308675405638 6.53276448953461 5.45012790055799 5.31688256862268 6.16760675201946 5.25628646139257 5.06220724298953 6.68088877228741 7.29531298907796 6.29181841680849 6.83905638853771 6.18915647084904 6.21152832059715 5.09965899103595 5.97774924827023 5.10842873713766 0.250513237953092 0.253240509568906 0.267032175035874 0.261458452637044 0.251984785820828 0.265456782835876 0.249611844125967 0.260558331543779 0.267510681100827 0.252167439223212 0.256832185943749 0.253819704639464 0.260234234373369 0.254385992860294 0.251869843240072 0.248702191609001 0.27456956800102 0.265950643569253 0.254694130063384 5 5 - 21217417 21217918 21217614.818 21217281 21218836 - gene protein_coding_gene TRUE TRUE AT5G52180.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD44788.1); contains domain Photosystem II reaction centre subunit H, transmembrane region (SSF81490) -0.286461260012085 -1.42206939487980 0.183808282931736 1 0.980524446762138 11.3934504686542 -0.286461260012085 0.301140790197537 AT5G27540_at 8.07848781162572 8.44906813776894 8.9070148111175 9.10672965356985 9.0387663010754 8.92654741253818 8.37817455607808 8.19362388111793 7.21892863729903 7.60511643551628 7.68740288011698 8.18450633842534 8.1847096610775 8.0362492396054 8.34354880962791 8.27190781026183 8.65130936876372 8.2358664879949 7.44719477153427 0.143025175514139 0.151809722574960 0.154703162779043 0.149709492304664 0.148979501421729 0.152406347140791 0.145632755630067 0.152870852067011 0.177221030393402 0.152512422370626 0.153543017915801 0.145655683018593 0.144854863385508 0.149852274911216 0.156884518927442 0.145397557864876 0.147860871044681 0.139710465992476 0.155569262379254 5 5|0 +|/ 9726330 9727089 9726667.2 9722428 9727457 + gene protein_coding_gene TRUE TRUE AT5G27540.1|AT5G27540.2 EMB2473 (EMBRYO DEFECTIVE 2473); GTP binding / calcium ion binding similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G63150.1); similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G05310.1); similar to Os03g0810600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051665.1); similar to Os01g0843300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044775.1); similar to putative mitochondrial Rho 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD81741.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain EF hand associated, type-1; (InterPro:IPR013566); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain EF hand associated, type-2; (InterPro:IPR013567) -0.133465323447519 -1.42036388533231 0.184291567972647 1 0.978480736735554 16.4463936652451 -0.133465323447519 0.0818802480891049 AT5G56340_at 5.66455981917728 6.28772332226662 7.04794999389814 7.27336360370536 7.7343807085364 6.38601953957882 5.37655441961078 6.2031353487036 4.93746089458006 5.70015819147717 7.69084691037377 7.38969377917781 7.22940856274208 6.57427242301097 6.40493004244857 7.03469057308248 5.59127065840204 6.25591348708749 5.40036012229432 0.309195379068936 0.302863401583403 0.306384176129561 0.317540973697894 0.320241161313218 0.323375767616481 0.304906687421357 0.310080495641005 0.336533028987355 0.308848686345571 0.318402181109972 0.305338057707309 0.302316712142538 0.341550284540971 0.311403462150955 0.306186101441229 0.315780672584224 0.319455405853465 0.309224416823073 5 5 + 22836088 22836640 22836354.727 22834786 22836883 + gene protein_coding_gene TRUE TRUE AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G26400.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE89147.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.282491403249765 1.41983211048310 0.184442475652601 1 0.977843839192413 12.5553965314302 0.282491403249765 0.296750044297847 AT5G51200_at 6.46835109561478 6.61689861211916 7.06594900511398 7.23231546363408 7.8623428591569 7.41506709212784 6.47670291090873 6.1373752404418 5.79852063603134 5.49782638085019 7.37286150070544 7.5527616446801 7.42192103611177 7.35439567712856 7.14765520860117 7.44525997003851 6.60219093139662 6.56331809725166 6.02613840041723 0.215610128101655 0.218133622936601 0.216170924204795 0.214873340032053 0.212727937383606 0.233612499574163 0.213949045266802 0.229512290391361 0.227946944720191 0.234723594097789 0.217304870901078 0.212727937383606 0.218444912712148 0.212727937383606 0.216943808696082 0.212727937383606 0.221485467215011 0.232756758040859 0.225598919503074 5 5 + 20835699 20836577 20836066.8 20822152 20836818 + gene protein_coding_gene TRUE TRUE AT5G51200.1 similar to hypothetical protein MtrDRAFT_AC135797g1v1 [Medicago truncatula] (GB:ABE82088.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93939.1); contains domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain (SSF56425) 0.144805130635658 1.41811051820097 0.184931750092602 1 0.975782987381943 13.3877289418924 0.144805130635658 0.104543215163548 AT5G25220_at 6.9975987945767 7.27360828868384 8.82704863873336 8.6457780864497 9.07652058453011 8.20240918748551 8.60923358138797 8.31254202792478 7.34732679525613 7.74393840907128 8.3779082682728 8.09314688289753 8.35767169875125 8.43165374344536 7.32039855442173 8.5001439175066 8.13972430115879 7.72994145764335 7.5864966681203 0.202984525823341 0.199052554485261 0.200389720428581 0.194421908268111 0.198842193063366 0.215145195313204 0.197029094166523 0.203612088074036 0.210516234339028 0.196425881490015 0.201030375292393 0.192503585749356 0.196505550478881 0.200614578854006 0.20637108563767 0.200403778088619 0.20449531558481 0.201393281367373 0.199530587122405 5 5 + 8737208 8738093 8737627.182 8736077 8738587 + gene protein_coding_gene TRUE TRUE AT5G25220.1|AT5G25220.2 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription factor|KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia Identical to Homeobox protein knotted-1-like 3 (KNAT3) (KNAT3) [Arabidopsis Thaliana] (GB:P48000); similar to KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4), transcription factor [Arabidopsis thaliana] (TAIR:AT5G11060.1); similar to Homeobox protein knotted-1-like 3 (KNAP3) (GB:O04136); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain KNOX2; (InterPro:IPR005541); contains InterPro domain KNOX1; (InterPro:IPR005540) -0.185855058330180 -1.41809828226571 0.184935231464972 1 0.975768346067768 16.0821311789689 -0.185855058330180 0.169658618340710 AT5G38970_at 0.600622750546782 1.00566358350406 0.670225567248466 0.962354554989983 0.866711832436712 1.05491021067164 0.991136871659457 0.639360233351796 0.968475204456654 0.7471965231667 1.19976325547419 1.46557544600399 1.01291681484357 1.47465468983348 1.21996815007961 1.0675281111908 1.17835959405002 1.39492063538723 1.0048073146802 0.194451208326028 0.195076038586436 0.200622405974834 0.200727419823468 0.197109630284791 0.202467901399339 0.195271661865463 0.200973680567391 0.194451208326028 0.205505426962487 0.203584998799281 0.196205547137866 0.19916651203768 0.200970058791204 0.20002021655467 0.210644892122609 0.205993185177660 0.201312662536968 0.202335225237899 5 5 - 15612170 15613648 15613050.182 15611904 15615115 - gene protein_coding_gene TRUE TRUE AT5G38970.1|AT5G38970.2|AT5G38970.3 BR6OX1 (BRASSINOSTEROID-6-OXIDASE); oxygen binding Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. Identical to Cytochrome P450 85A1 (EC 1.14.-.-) (Brassinosteroid-6-oxidase 1) (BR6ox 1) (C6-oxidase 1) (CYP85A1) [Arabidopsis Thaliana] (GB:Q9FMA5); similar to BR6OX2/CYP85A2 (BRASSINOSTEROID-6-OXIDASE 2), monooxygenase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT3G30180.1); similar to cytochrome P450 [Phaseolus vulgaris] (GB:AAR13307.1); similar to brassinosteroid-6-oxidase [Vitis vinifera] (GB:ABB60086.1); similar to Cytochrome P450 85A (C6-oxidase) (GB:Q69F95); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain E-class P450, group IV; (InterPro:IPR002403)|Identical to Cytochrome P450 85A1 (EC 1.14.-.-) (Brassinosteroid-6-oxidase 1) (BR6ox 1) (C6-oxidase 1) (CYP85A1) [Arabidopsis Thaliana] (GB:Q9FMA5); similar to BR6OX2/CYP85A2 (BRASSINOSTEROID-6-OXIDASE 2), monooxygenase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT3G30180.1); similar to brassinosteroid-6-oxidase [Vitis vinifera] (GB:ABB60086.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|Identical to Cytochrome P450 85A1 (EC 1.14.-.-) (Brassinosteroid-6-oxidase 1) (BR6ox 1) (C6-oxidase 1) (CYP85A1) [Arabidopsis Thaliana] (GB:Q9FMA5); similar to BR6OX2/CYP85A2 (BRASSINOSTEROID-6-OXIDASE 2), monooxygenase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT3G30180.1); similar to Cytochrome P450 85A (C6-oxidase) (GB:Q69F95); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain E-class P450, group IV; (InterPro:IPR002403) 0.148150357279216 1.41768635465956 0.185052465667024 1 0.975275488659543 1.9281417928223 0.148150357279216 0.110614674997397 AT5G38160_at 1.93001045195702 1.92718798058583 1.76558814538032 1.73177812859598 1.79608060326740 1.94404636779310 1.99800515577977 1.84064951548304 1.99563752578130 2.07230477613139 2.16760253298587 2.00231064402639 2.37676347104291 2.26249257158482 1.90848005712510 2.18788936679729 2.20398438186099 2.40539723054039 1.86992322126085 0.222079762742649 0.231325399914351 0.219580272045181 0.221233895103029 0.224335134737454 0.216969243246131 0.223489785444122 0.216969243246131 0.224394516393327 0.217233084225112 0.227102739710215 0.217027833856376 0.220162971137213 0.216969243246131 0.218192326779009 0.216969243246131 0.227735120038040 0.236763550173139 0.221493309597684 5 5 + 15243079 15243348 15243196.455 15242997 15243438 + gene protein_coding_gene TRUE TRUE AT5G38160.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38170.1); similar to lipid transfer-like protein [Brassica napus var. napus] (GB:AAS68185.1); similar to seed specific protein Bn15D80B [Brassica napus] (GB:AAP37973.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.117077555046183 -1.41600606951713 0.185531325935409 1 0.97326605552108 3.9509950634653 -0.117077555046183 0.0378375815135593 AT5G13070_at 7.00949754842546 7.59960155023054 7.86409483373306 8.06931971030361 8.00083261324722 7.53023531592526 7.04639777227365 7.2111562754959 6.37565304523834 5.8890812382367 7.14387163779647 7.38422093707666 7.41248584770215 7.45341873826818 7.19526393519055 7.39413811030686 6.8981768981276 7.30916039040274 6.35533803779841 0.218415064758704 0.212374286546463 0.210183419007644 0.20997789803153 0.214007682082821 0.210130384484781 0.216842822345704 0.213405143234081 0.225516477034121 0.220963503668506 0.206053188001865 0.209937850368653 0.212236475840676 0.210679777199822 0.208012524009743 0.206053188001865 0.229175417779260 0.209884942663643 0.206053188001865 5 5 + 4148254 4149038 4148610.273 4147639 4149255 + gene protein_coding_gene TRUE TRUE AT5G13070.1 MSF1-like family protein similar to hypothetical protein DDBDRAFT_0188914 [Dictyostelium discoideum AX4] (GB:XP_635610.1); similar to Os02g0717900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047936.1); contains InterPro domain Iron dependent repressor; (InterPro:IPR001367); contains InterPro domain MSF1; (InterPro:IPR006797) -0.164522007139513 -1.41446830184842 0.185970490231095 1 0.971428425681557 14.2816583702627 -0.164522007139513 0.138329810265593 AT5G05610_at 7.74366732838053 7.99774465096699 8.44013627846277 8.5451497488387 8.53098823755306 8.8565166391597 7.15914533467716 7.5930225528639 7.31986023239798 7.07245712811361 8.52343277102255 8.43062726058438 8.19372366129875 8.33112668242448 8.30678015549369 8.6360011160279 8.48758690850092 8.25025147918279 7.29517389076801 0.166327678182161 0.164593878850795 0.165247005496325 0.164593878850795 0.171007800899907 0.164593878850795 0.171281148847536 0.188536211228182 0.197077873302040 0.178487627500226 0.168335278125292 0.170719143492887 0.169924412125749 0.175417534473608 0.170442175126015 0.166507311284995 0.175198308336653 0.168378166826395 0.175372018855722 5 5 - 1677344 1678553 1677912 1676933 1679105 - gene protein_coding_gene TRUE TRUE AT5G05610.1|AT5G05610.2 PHD finger family protein similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT3G11200.1); similar to PHD4 [Medicago truncatula] (GB:ABJ99761.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.144728946071752 1.41364071766427 0.186207200573069 1 0.970440005854292 15.9203488487346 0.144728946071752 0.105236772953527 AT5G05640_at 1.92929747921875 2.21180464049665 2.35943387393070 2.90180514687041 2.825543830076 2.29486683663458 2.12611203135379 1.96421991656982 1.96064363767007 2.38778223051509 2.23462414815344 2.53207427279023 2.80458401053884 3.07029505434727 2.0354501233513 2.46333453650613 1.92820958291978 2.83212424086898 2.29186369211454 0.228474679442649 0.226573305914374 0.229509827807780 0.233154554413639 0.220866190501722 0.229469245217015 0.228273468754429 0.231102766858188 0.231303740463097 0.222088423993873 0.223279627882256 0.224164943011511 0.224749120641437 0.231999401373799 0.225566280015274 0.226646422217648 0.223909833159073 0.220866190501722 0.221534143311627 5 5 + 1684984 1685548 1685208.091 1684570 1685783 + gene protein_coding_gene TRUE TRUE AT5G05640.1 nucleoprotein-related 0.167122462104999 1.41173302707261 0.186753821112761 1 0.968163014261561 4.6771438942027 0.167122462104999 0.142893701877562 AT5G43970_at 7.68893324371341 7.71491018726882 8.26458877477737 8.28896347217155 8.33718386692278 7.94420350991912 7.56778700695404 7.67936656248754 6.95801203649235 6.53925863212828 8.2678117520228 8.71408839833187 8.00671995181413 8.31614256517727 8.88053265244405 8.14695978243041 7.85664958555049 8.09157203383311 6.48910566327897 0.139279648442257 0.130859463252251 0.130974897288491 0.132680388765353 0.132704223359826 0.129203370260288 0.131175888705759 0.139093573866326 0.136662198547742 0.135639574953483 0.128320232510801 0.133606722075151 0.138105516922460 0.135050802256207 0.128048625135008 0.131471816748017 0.135311518109176 0.134304751711778 0.141321594557099 5 5 + 17710133 17710383 17710255.545 17710034 17710630 + gene protein_coding_gene TRUE TRUE AT5G43970.1 TOM22-V (TRANSLOCASE OUTER MITOCHONDRIAL MEMBRANE 22-V) Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion. Identical to Mitochondrial import receptor subunit TOM22 homolog 2 (Translocase of outer membrane 22 kDa subunit homolog 2) (Mitochondrial import receptor subunit TOM9-2) (Translocase of outer membrane 9 kDa subunit TOM9-2) (TOM22-2) [Arabidopsis Thaliana] (GB:Q9FNC9); similar to TOM22-I (translocase of the outer mitochondrial membrane 22-I) [Arabidopsis thaliana] (TAIR:AT1G04070.1); similar to unknown [Solanum tuberosum] (GB:ABB55375.1); contains InterPro domain Mitochondrial import translocase, subunit Tom22; (InterPro:IPR005683) 0.127800314261969 1.41142618394623 0.186841869158716 1 0.967796959309062 15.4093345951103 0.127800314261969 0.070963487993737 AT5G16530_at 0.821365177482271 1.07829290152455 1.21078983808714 1.21440171332129 1.16440628942432 1.14756627755873 1.28231850985126 1.56706084006818 0.640665482895797 1.05269032870478 1.19567855978266 1.61782662693745 1.16211837585067 1.38082510995572 1.56659443578087 1.39544247905287 1.26776046410215 0.88861614141436 1.02146670365974 0.205884898882784 0.201590379393608 0.201023316306079 0.206986912829327 0.201023316306079 0.203903100588312 0.207939293765209 0.211674754834225 0.204701670414501 0.215251212276129 0.201023316306079 0.201023316306079 0.220668739477237 0.201023316306079 0.212855068952732 0.209608885732210 0.217368859522798 0.205771528489715 0.204269368693752 5 5|0 +|/ 5401295 5402414 5401662.5 5400738 5402479 + gene protein_coding_gene TRUE TRUE AT5G16530.1 PIN5 (PIN-FORMED 5); auxin:hydrogen symporter/ transporter similar to PIN8 (PIN-FORMED 8), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT5G15100.1); similar to Putative auxin efflux carrier component 8 (AtPIN8) (GB:Q9FFD0); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Auxin Efflux Carrier; (InterPro:IPR004776) 0.125786206293094 1.40953880467451 0.187384221959034 1 0.965546520856823 2.29292449967957 0.125786206293094 0.0664373694509989 AT5G47810_at 4.19326859099838 4.04104041045471 4.84854701879858 4.72071575729448 5.16406846580522 5.67291324743989 3.55199747918639 3.32985984236484 3.64654089513650 3.66988280312155 4.35836620910677 3.96460930408218 4.0147615757044 4.18232876413972 4.73588260404983 4.55916709370151 4.35112799078595 4.41720911166016 3.98822190036756 0.213898504690567 0.215922022709977 0.214872884586943 0.218353014871770 0.218897733142347 0.212075244988745 0.213483536077106 0.209636845102539 0.218555445551812 0.214113192846328 0.209219631186621 0.209219631186621 0.212781692701953 0.217572635243621 0.222956075662157 0.211698092517603 0.226803922631299 0.22029572345905 0.212267104280309 5 5 - 19373825 19374357 19374063.727 19373582 19375351 - gene protein_coding_gene TRUE TRUE AT5G47810.1 phosphofructokinase family protein similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G26270.1); similar to putative pyrophosphate-dependent phosphofructo-1-kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD86939.1); similar to Os04g0469500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053045.1); similar to OSIGBa0124N08.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67040.1); contains InterPro domain Pyrophosphate-dependent phosphofructokinase TP0108; (InterPro:IPR012004); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023) 0.142541322177860 1.40913068324638 0.187501673735008 1 0.965060152976747 8.48587474214066 0.142541322177860 0.102055661722039 AT5G41210_at 9.91363849301659 9.96832819624028 10.5937836475081 10.6110216697935 10.7902713661089 10.3239217892132 10.184955346307 9.80956111056894 8.73736537600657 9.73223257824188 10.3003377029347 10.2368846555050 10.2055979611218 10.2385619131891 10.3729544398264 10.3135911432235 10.2377085072176 10.1607291565208 9.2896717149521 0.103973872342513 0.102722075005492 0.103616085549607 0.103154519747844 0.103714142857964 0.107450880103102 0.102913401961577 0.105087514018588 0.140497245270250 0.105749199246946 0.10817811798386 0.102923613579444 0.104270082943068 0.108796211005469 0.104446721175339 0.105249957107869 0.112219964881152 0.111179280942310 0.113032158267325 5 5|0 -|/ 16509780 16510652 16510134.25 16509548 16511222 - gene protein_coding_gene TRUE TRUE AT5G41210.1 ATGSTT1 (Arabidopsis thaliana Glutathione S-transferase (class theta) 1); glutathione transferase Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). similar to ATGSTT2 (Arabidopsis thaliana Glutathione S-transferase (class theta) 2), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41240.1); similar to ATGSTT3 (Arabidopsis thaliana Glutathione S-transferase (class theta) 3), glutathione transferase [Arabidopsis thaliana] (TAIR:AT5G41220.1); similar to glutathione S-transferase GST 23 [Glycine max] (GB:AAG34813.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.143488850463547 1.40770757609603 0.187911711774887 1 0.963364927982953 20.0301279896825 0.143488850463547 0.104076357200397 AT5G41440_at 1.228152364783 1.44701083263536 1.65495931208591 2.20252641328922 1.43253795240851 1.31049750376346 1.02771326439606 1.64075009226299 1.82572876539728 2.29105328705471 1.67320285130575 1.70916426059127 1.77765281905978 1.46315580070605 1.51408924392581 1.66619015582854 1.54350315443258 2.30839261919644 2.20760168514936 0.179932004087611 0.182931256498777 0.180388684405534 0.183448518293854 0.178065592335261 0.181198297947003 0.182922412110227 0.184248359477783 0.18287735682414 0.185392922750327 0.182229609551750 0.178711284084711 0.18239943955469 0.178065592335261 0.188047442912901 0.181157515549954 0.185344594008832 0.181773140944453 0.182498510546537 5 5 - 16604470 16604786 16604633.273 16604463 16604837 - gene protein_coding_gene TRUE TRUE AT5G41440.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G41430.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15934.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.170110478958345 -1.40518818455277 0.188639480051704 1 0.960366561271664 3.40054185478534 -0.170110478958345 0.148709929835996 AT5G39370_at 1.78110491566265 1.90624600595429 1.72005795865827 1.75187365011064 1.11960938737555 1.83758393206436 1.12972418162049 1.50227007764014 2.30969991824467 1.77471415308725 2.15625155130111 1.60892403045284 2.13268649792155 2.02035149607923 1.86542724709633 1.74148349648220 1.8916847125455 1.95503734832895 1.93320230633259 0.247862908187458 0.243691701961556 0.248366635219627 0.252100414385942 0.246437587783280 0.249765912688095 0.249689120923267 0.251144819822457 0.259012091781034 0.259629192191118 0.249277091520138 0.251058819761286 0.249645671546648 0.251055536116252 0.249935238915638 0.243691701961556 0.243905484528184 0.245053270065853 0.248113752184042 5 5 + 15774945 15775295 15775086.636 15774945 15775337 + gene protein_coding_gene TRUE TRUE AT5G39370.1 S-locus glycoprotein, putative similar to ARK2 (Arabidopsis Receptor Kinase 2), kinase [Arabidopsis thaliana] (TAIR:AT1G65800.1); similar to S-locus glycoprotein [Brassica oleracea] (GB:BAC24067.1); similar to serine/threonine kinase receptor (GB:AAA33008.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) -0.165543775096853 -1.40456878277304 0.188818768951310 1 0.959629944073318 3.55723522534286 -0.165543775096853 0.141751780695824 AT5G03010_at 1.5165139752144 1.90643241747625 2.37567859388585 2.55148002942720 1.78210429982800 1.82426775574355 2.12403953604283 1.97978381836371 2.19927257529536 2.09257103647784 1.52857813144167 1.51972109787077 1.70046302371144 2.08868605551909 1.80696654700938 1.87841247454333 1.832090962028 2.2155840030461 1.73384991852698 0.244838086410082 0.236559442858980 0.232392754172786 0.253009351760218 0.250537428384586 0.244629771180825 0.232392754172786 0.258869474576645 0.232392754172786 0.270544856535779 0.232392754172786 0.241698627629213 0.245634594621311 0.238513994893264 0.245677805162816 0.238240200982327 0.232392754172786 0.235848111252192 0.232392754172786 5 5 + 705096 705330 705171.6 704582 705536 + gene protein_coding_gene TRUE TRUE AT5G03010.1 kelch repeat-containing protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G03020.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.13040950512727 -1.40445324482673 0.18885222790742 1 0.959492565470988 3.92247620174586 -0.13040950512727 0.0784550538574863 AT5G63200_at 6.38509629365225 6.0360782617382 7.33951899695162 7.21594772477865 7.47725424755509 7.2190796754646 6.0223471116956 5.54435916165797 5.23173761122288 5.20384091022647 6.3550182219284 6.40409420223193 6.45652295712066 6.34428296865376 6.04157206086445 6.41876487046969 6.68586272200151 6.35638751584436 5.51033904457308 0.164432053528217 0.163403166069338 0.162996419180509 0.165580575175783 0.169645614879659 0.175071886270634 0.160188607856812 0.163575110050286 0.169132704376114 0.170817311576320 0.161822305995757 0.162682099330118 0.163134688418024 0.167609380846315 0.161391053076432 0.16077526624009 0.165426509106978 0.165609296207012 0.165802975768870 5 5|0 +|/ 25367691 25370092 25368942.895 25366237 25370265 + gene protein_coding_gene TRUE TRUE AT5G63200.1 tetratricopeptide repeat (TPR)-containing protein similar to SEC (SECRET AGENT), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G04240.1); similar to P0497A05.3 [Oryza sativa (japonica cultivar-group)] (GB:BAB92560.1); similar to Os01g0906600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045134.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.148542766305507 1.40433172006285 0.188887426007873 1 0.959348076383166 12.5040197068018 0.148542766305507 0.113770778935162 AT5G17160_at 1.73553455946507 1.87622436111559 1.73718222016519 1.69557050650171 1.37890898173282 1.81450189710505 1.83960167094112 1.78378899858127 1.34078857030591 2.12462662110125 2.14931486467476 3.06047137475919 2.20285369701165 2.04570195133108 3.67313593400333 2.05784866822455 2.56969857670876 2.45802505858223 1.91033773238563 0.228271333739162 0.226729626863592 0.23296406137448 0.230429348474133 0.230548811982162 0.232468032679001 0.229254931052717 0.234310420937003 0.239069856042431 0.230711684114941 0.222449888893907 0.23543584020422 0.227333244347215 0.235254052347064 0.246723768888234 0.226470398204565 0.231040723623989 0.238205975243381 0.232768377015073 5 5 - 5639867 5640367 5640195.636 5639648 5642515 - gene protein_coding_gene TRUE TRUE AT5G17160.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03130.1); similar to hypothetical protein MtrDRAFT_AC144806g2v1 [Medicago truncatula] (GB:ABE91887.1) 0.131132670069168 1.40410512200971 0.188953072050702 1 0.959078680525896 3.89218860291408 0.131132670069168 0.0801266261728874 AT5G05490_at 0.621901901783618 1.15971802632276 1.25184984121813 0.85446559220026 0.75389659964162 0.988155981288426 0.500643389571625 0.86304745925222 1.12276798888323 0.8673698200398 1.23011148939233 0.881714887129492 1.17355143272726 0.84481075339185 1.19297838353941 0.976263037628717 1.16994034245850 1.42685201716302 0.525238246343441 0.201004533507344 0.202996887016953 0.201004533507344 0.206865809010860 0.203927202863847 0.202784651330500 0.206783610919217 0.20678724658076 0.215389454327977 0.20514689172187 0.201446848290644 0.201456130155939 0.202445798022652 0.203258678059821 0.203209020935846 0.201004533507344 0.205565344386146 0.21060879619195 0.210334851712094 5 5|0 +|/ 1628138 1628948 1628528.125 1624207 1629270 + gene protein_coding_gene TRUE TRUE AT5G05490.1|AT5G05490.2 DIF1/SYN1 Encodes a RAD21-like gene essential for meiosis. Encodes a 627 a.a. protein that is slightly longer in the N-terminus than SYN1 BP5.|Encodes a RAD21-like gene essential for meiosis. Encodes a 617 a.a. protein that is slightly shorter in the N-terminus than SYN1 BP2. Identical to Sister chromatid cohesion 1 protein 1 (SCC1 homolog 1) (DETERMINATE INFERTILE 1 protein) (SYN1) [Arabidopsis Thaliana] (GB:Q9S7T7;GB:Q9SQI1); similar to SYN3 (Sister chromatid cohesion 1 protein 3) [Arabidopsis thaliana] (TAIR:AT3G59550.1); similar to Os05g0580500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056426.1); similar to cohesion protein [Zea mays] (GB:AAX14638.1); contains InterPro domain Rad21/Rec8 like protein, C-terminal; (InterPro:IPR006909); contains InterPro domain Rad21/Rec8 like protein, N-terminal; (InterPro:IPR006910) 0.162723039330245 1.40227526599653 0.189483892595676 1 0.956904269655418 1.84945308791866 0.162723039330245 0.137725268283386 AT5G59780_at 10.9679620656622 10.7234722160348 12.1766055420267 11.8844771089860 12.2236672362673 11.9352983572058 11.5256154143425 11.0660453279849 10.6216461626075 11.0147449216237 10.4427542882673 9.6149130314081 10.9315880791487 10.9831735966167 9.07235278088942 11.2894852607143 11.7500893530539 10.7947543101210 10.6191993287403 0.101810562810884 0.101316408006519 0.104161275924625 0.099448510959907 0.106037053136051 0.105347513821469 0.100283522123844 0.105214071564397 0.116064977589813 0.101599048823788 0.103801041556991 0.102784756018108 0.102655398489170 0.102070775902563 0.117222529158314 0.100631471704728 0.105433566299776 0.105381186384785 0.101845575181448 5 5 - 24099651 24100288 24099911.545 24099423 24100657 - gene protein_coding_gene TRUE TRUE AT5G59780.1|AT5G59780.2|AT5G59780.3 MYB59 (myb domain protein 59); DNA binding / transcription factor Encodes a putative transcription factor (MYB59). Identical to Transcription factor MYB59 (Myb-related protein 59) (AtMYB59) (MYB59) [Arabidopsis Thaliana] (GB:Q4JL84;GB:O50069;GB:Q4JL85;GB:Q4JL86;GB:Q7DLH5;GB:Q9FN86); similar to MYB111 (myb domain protein 111) [Arabidopsis thaliana] (TAIR:AT3G46130.3); similar to MYB transcription factor MYB139 [Glycine max] (GB:ABH02860.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|Identical to Transcription factor MYB59 (Myb-related protein 59) (AtMYB59) (MYB59) [Arabidopsis Thaliana] (GB:Q4JL84;GB:O50069;GB:Q4JL85;GB:Q4JL86;GB:Q7DLH5;GB:Q9FN86); similar to MYB111 (myb domain protein 111), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G46130.1); similar to MYB transcription factor MYB139 [Glycine max] (GB:ABH02860.1); similar to Os11g0700500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068517.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.148757547540366 -1.40122076075802 0.189790364188716 1 0.955652056131369 22.2437690628227 -0.148757547540366 0.114723049672526 AT5G58680_at 2.58801927207871 2.27774407806052 2.52044698965028 3.14826974053193 2.60298008062544 2.60586160682587 2.55118690785310 2.27311378129869 2.50576208065795 2.61256237100117 2.58660311941976 2.37938903102752 2.46303460829927 2.37840085692689 2.37920494261467 2.33300722243863 2.54065916665589 2.49515023681354 2.35158433699347 0.181499544808342 0.182427960141492 0.184244339245604 0.185303509498773 0.181704582120815 0.18124434914593 0.192500594265506 0.179226429735774 0.177868286921642 0.184589897534782 0.180087998255661 0.179236376837652 0.179811032454055 0.179991288204172 0.182803883045023 0.185621794347539 0.187638428246843 0.190836640899851 0.183872729395293 5 5 - 23725524 23725969 23725723.182 23725338 23726577 - gene protein_coding_gene TRUE TRUE AT5G58680.1 armadillo/beta-catenin repeat family protein similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G01400.1); similar to Os07g0587500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060138.1); similar to Os03g0435300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050437.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE88245.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.158038704894340 -1.40109971325452 0.189825571069873 1 0.955508353382907 5.03815317923659 -0.158038704894340 0.130397012949726 AT5G64190_at 2.9914160453472 3.35184108681588 3.07944015067483 3.48193357652867 3.09749743111604 3.22408464418751 2.27945523022872 2.35878196141623 1.26727692591144 2.1195407273595 0.655015910056824 1.03617697555987 1.61287453957847 1.14904895957226 1.18130543504679 1.65740652390180 2.51743075359850 1.18355345045570 1.67719057624794 0.238768184988867 0.245381999695466 0.2443920358916 0.241526093443606 0.239338817094166 0.238005487414572 0.240668216333006 0.237589365670813 0.248003684860732 0.24613406036758 0.242404833521678 0.242321045590601 0.246623737274408 0.237589365670813 0.245262616335495 0.239664179402618 0.237948776166982 0.240148304338796 0.237589365670813 5 5 + 25697794 25698346 25698003.455 25696658 25698491 + gene protein_coding_gene TRUE TRUE AT5G64190.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40390.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84883.1) -0.138998221960071 -1.40034777867610 0.190044396088421 1 0.954615870687567 4.5141084216115 -0.138998221960071 0.0970070141287122 AT5G41330_at 4.58255427858816 4.78732698606405 5.4726725558373 5.33803227170716 6.88896482308329 5.52743111910694 5.30251320746697 4.29661765819259 3.72337106967081 3.31027330552159 4.3452478280386 4.71752710804998 4.88019587101387 4.57236836644064 4.31503746123031 4.79046525107706 4.77299595605733 4.61628884517661 3.14075442086526 0.222444446902844 0.222444446902844 0.225855818897610 0.225273881585564 0.235262408215022 0.230767905700492 0.225607051327209 0.224606500078966 0.231535786142440 0.225254666996587 0.222468260594823 0.222444446902844 0.225423059552323 0.228465333871666 0.225554909858379 0.222444446902844 0.233593228810848 0.233912135903393 0.227079519977315 5 5 - 16553692 16554193 16553998 16552567 16555131 - gene protein_coding_gene TRUE TRUE AT5G41330.1 potassium channel tetramerisation domain-containing protein similar to potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G09030.1); similar to BTB/POZ [Medicago truncatula] (GB:ABD28655.1); contains InterPro domain K+ channel tetramerisation; (InterPro:IPR003131); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain BTB; (InterPro:IPR000210) 0.277812310075718 1.39927871513713 0.190355877210417 1 0.953347528526335 9.28338016312486 0.277812310075718 0.29600238920743 AT5G14120_at 10.9537654726289 11.0319566596547 11.2956789724997 11.2526432464299 11.4686028733035 11.4267257845422 10.6623413015482 10.7447048392224 10.8892255608457 10.9902700899769 11.5581726708556 11.2173519823368 11.3709626386206 11.2795100085621 10.7064362349598 11.5821574665851 11.4736557429351 11.2891118703886 10.8363334025445 0.0803895699469356 0.0794070722092382 0.0798196788770422 0.0794070722092382 0.0843294594221704 0.0843530378398357 0.0796385497508154 0.0849539332115046 0.0953460839313261 0.081705407240282 0.0804373132103972 0.0796904077731937 0.0815616028472427 0.0810841073279164 0.081631127659297 0.0794070722092382 0.0836875958660368 0.084118348210131 0.0863602317224387 5 5|0 +|/ 4557869 4558413 4558207.1 4555984 4558712 + gene protein_coding_gene TRUE TRUE AT5G14120.1 nodulin family protein similar to nodulin family protein [Arabidopsis thaliana] (TAIR:AT3G01930.2); similar to Nodulin-like; Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE77921.1); similar to Os08g0532400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062339.1); similar to Os04g0388700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052632.1); contains InterPro domain Nodulin-like; (InterPro:IPR010658) -0.112622049500531 -1.39885953405661 0.190478126840631 1 0.952850385066829 22.2120254827426 -0.112622049500531 0.0222315496421285 AT5G19110_at 1.12787177463747 1.10814706189957 1.36001160235930 1.2263705441202 1.20674922618228 1.03671744816562 1.17153074409153 0.742390308034173 0.93978746429573 1.02959570335462 1.39841359078777 1.32998490817715 1.53281845607182 1.47629135838874 1.29283175099271 1.28581481981012 1.29491685594032 1.08361932864416 1.30182780545311 0.211363994005548 0.206075450131667 0.20657496414221 0.205158577967360 0.217365447190321 0.211252313492201 0.207424321288323 0.20793587809455 0.203774439186943 0.208647983763991 0.205706565497108 0.216777802455738 0.207626832123048 0.203774439186943 0.203774439186943 0.203774439186943 0.214621936048090 0.217495267656981 0.214249996590476 5 5 - 6411739 6412486 6412061.818 6411563 6413172 - gene protein_coding_gene TRUE TRUE AT5G19110.1 extracellular dermal glycoprotein-related / EDGP-related similar to extracellular dermal glycoprotein, putative / EDGP, putative [Arabidopsis thaliana] (TAIR:AT1G03220.1); similar to EDGP precursor [Daucus carota] (GB:BAA03413.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.131809932339399 1.39609143841959 0.191287075818982 1 0.949569936692529 2.33609360933764 0.131809932339399 0.0832321542363922 AT5G06120_at 6.41017341162644 6.55947713805212 7.6160422155361 7.50664430321449 7.97107180013879 7.30531359994195 6.92697712599692 6.78020565871833 6.91514841855625 6.15699013068012 7.5693378879681 7.30395576425524 7.36745677275864 7.41938071195073 7.06853883752388 7.45560916484554 7.41916699894921 7.18816373654922 6.49751882910992 0.190949957187400 0.179442911752688 0.179044873294313 0.175620667931896 0.181848340443044 0.196097036143341 0.175696742958733 0.173181125017799 0.179487644349794 0.182463207337003 0.174001681191087 0.176009402371457 0.176089615267204 0.180468609589971 0.17365593942124 0.175162693944227 0.183249149146226 0.177771178354382 0.179272402800237 5 5|0 +|/ 1851656 1852567 1852043.2 1844079 1852602 + gene protein_coding_gene TRUE TRUE AT5G06120.1 Ran-binding protein, putative similar to putative RAN binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77036.1); similar to exportin 7 [Gallus gallus] (GB:NP_001012960.1); similar to Importin-beta N-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97640.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) -0.152443960769996 -1.39482530718265 0.191658054736484 1 0.94807089101128 14.0705733368859 -0.152443960769996 0.122250026977200 AT5G58890_at 1.50459369408808 1.53113299011837 1.89660175561513 1.95008768983424 1.66228902009433 1.53624857343347 1.32532882087122 1.62299315334182 1.96306291660062 1.80258080502048 1.55163060771891 1.62363980142586 1.8045319925271 1.71188274294251 1.52601380340137 1.38932598523516 1.98628282007505 1.76251510318441 1.99477182026495 0.168076627888945 0.168743551967185 0.170755897902182 0.179722742951327 0.168076627888945 0.171860892258705 0.172786715994605 0.176265519819235 0.174056838701682 0.169369388235262 0.182451241751458 0.168076627888945 0.170726818061787 0.168076627888945 0.170466375608306 0.181012693428708 0.173408425240000 0.169702644583124 0.170489190249203 5 5 + 23798452 23798856 23798647.455 23798058 23798942 + gene protein_coding_gene TRUE TRUE AT5G58890.1 MADS-box family protein similar to MADS-box protein (AGL47) [Arabidopsis thaliana] (TAIR:AT5G55690.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE87908.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.120749661141658 -1.39259399488076 0.192313309467046 1 0.945431310545977 3.42346764768749 -0.120749661141658 0.0568861316200443 AT5G23630_at 8.4639964806747 8.33895027690547 8.9883116467796 9.20706428159621 9.10595409476246 8.49787515058192 8.52287202933435 8.21971348335058 7.95183037804797 7.83168915979603 8.90029613090147 8.79154609956137 8.67652365660393 8.64735494256106 8.91086661426212 8.85143678643251 8.16112235547894 8.71193057269325 7.88776376660072 0.171240100444861 0.165318058618119 0.161669013610686 0.158306800971759 0.16264918391931 0.173082396329291 0.169676623746699 0.176223030429204 0.182524409583419 0.171187500488347 0.166507485968307 0.171265243307662 0.158780449415835 0.158564152591188 0.161426125060250 0.158306800971759 0.181497677654246 0.162700726950696 0.174298762932883 5 5 - 7960826 7961323 7961034.091 7960490 7967647 - gene protein_coding_gene TRUE TRUE AT5G23630.1 (MALE GAMETOGENESIS IMPAIRED ANTHERS); cation-transporting ATPase A novel member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. Identical to Putative cation-transporting ATPase (EC 3.6.3.-) [Arabidopsis Thaliana] (GB:Q9LT02); similar to ACA2 (CALCIUM ATPASE 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G37640.1); similar to Probable cation-transporting ATPase 13A1 (GB:Q9HD20); similar to PREDICTED: similar to ATPase type 13A [Apis mellifera] (GB:XP_396194.2); similar to KIAA1825 protein [Homo sapiens] (GB:BAB47454.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain P-type ATPase of unknown pump specificity (type V); (InterPro:IPR006544); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) -0.154064744863022 -1.39252375204613 0.192333967819568 1 0.945348260818796 16.9664983869782 -0.154064744863022 0.125408450472458 AT5G45690_at 0.57322671955018 0.85866778505605 0.795871746133538 1.28271995535378 0.543619568872847 0.704068387885706 0.373481210036171 0.95102737878671 1.38676157372190 1.05978651696948 0.779253578171741 0.622261821319633 1.30156755929544 0.792157067386917 0.627748696139087 0.661074388866707 0.666359375677569 0.884922489903995 0.988625040454646 0.238514188731766 0.245050743716008 0.251206526721251 0.246329557564630 0.237599749462517 0.243240701729294 0.237352990498795 0.245010077356459 0.245522738188508 0.246118543036343 0.243134767272626 0.242960381948873 0.241944886635513 0.248521575046647 0.244813332028651 0.245243367799731 0.246100405826063 0.24527052157181 0.237352990498795 5 5|0 -|/ 18552370 18553311 18552994.222 18552226 18553543 - gene protein_coding_gene TRUE TRUE AT5G45690.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18920.1); similar to Os01g0749000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044244.1); similar to Os01g0728700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044131.1); similar to unnamed protein product [Asper (GB:BAE62990.1); contains InterPro domain Protein of unknown function DUF1264; (InterPro:IPR010686) -0.164415958434905 -1.39112149460848 0.192746761685639 1 0.943690922390886 1.72882326019795 -0.164415958434905 0.142473623147994 AT5G15890_at 1.58454849789543 1.52859760851696 1.29141631725687 1.48694114734352 1.15128184980999 1.25793283988129 1.38298257061459 1.07721917204328 1.34142614751440 1.43737363287625 1.79400204292016 1.45234825566196 1.67068369080587 1.6920200172065 1.75149745896263 1.67973877294145 1.56564052956928 1.51244108092415 1.97784340893901 0.185567841438068 0.183499252057947 0.192776940456244 0.189152230942637 0.185648085778273 0.183781423615459 0.189583986464156 0.188171788864297 0.182982910382026 0.185262165838289 0.183826231229397 0.182982910382026 0.194217786632330 0.184067325577088 0.187565735241743 0.182982910382026 0.203897223088217 0.187032844260674 0.183535142942943 5 5 - 5187725 5188243 5187994.909 5187590 5189351 - gene protein_coding_gene TRUE TRUE AT5G15890.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15900.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96865.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -0.123831185037224 -1.38877729535354 0.193438508404301 1 0.94092277820626 2.95778710587052 -0.123831185037224 0.0661752867647594 AT5G63110_at 7.77271044525427 7.44038842280334 8.20749142014962 8.5512549832134 8.35818611695524 8.07040831477784 7.37173696615944 7.53133637605941 7.12891870452813 7.15132424660228 7.49233825941083 8.15231926757528 8.12209295163352 8.11421063300219 7.6886764318688 8.18272276080534 7.93286825838736 7.97308744864767 7.00074265755588 0.185127882764451 0.180547069819463 0.199290934597481 0.176151479684584 0.182186932499797 0.192508784266071 0.180104042059428 0.172718604797648 0.190047777626909 0.191960122936864 0.177971461289200 0.177329432603307 0.176820484264669 0.176606607800327 0.173295680013982 0.177299326440336 0.177905261342831 0.184890307672506 0.187144421583576 5 5|0 -|/ 25333072 25334193 25333829.6 25332850 25335573 - gene protein_coding_gene TRUE TRUE AT5G63110.1 HDA6 (HISTONE DEACETYLASE 6); histone deacetylase RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing. similar to HD1 (HISTONE DEACETYLASE 19, HISTONE DEACETYLASE19) [Arabidopsis thaliana] (TAIR:AT4G38130.2); similar to histone deacetylase [Triticum aestivum] (GB:AAU82113.1); similar to Histone deacetylase superfamily [Medicago truncatula] (GB:ABE82485.1); similar to histone deacetylase [Zea mays] (GB:AAD10139.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286); contains InterPro domain Histone deacetylase; (InterPro:IPR003084) -0.139271940529188 -1.38517531364499 0.194505482861271 1 0.936675449752487 15.4384148161608 -0.139271940529188 0.100446172788156 AT5G40500_at 8.80753624578052 8.78783602670837 9.3520650396074 9.39929466041133 9.98669084971034 9.50734338461445 9.58341219627796 9.37888163140081 8.94839119739389 9.25394941673914 10.2666452474743 10.0974061715220 9.71266856515147 9.94789171213547 9.62055329916924 9.97687933805001 9.71564057758336 9.9246930737978 9.25685560822992 0.108204635278583 0.111156002778356 0.110884765396650 0.115180981035784 0.112025829484780 0.113699282629450 0.112853131574408 0.111317347288722 0.121770976574065 0.112852437286588 0.114603482033941 0.113128448949835 0.109215575303969 0.117374439112665 0.109456039459597 0.111940359436926 0.116238723731867 0.110078323770205 0.116684966848461 5 5|0 +|/ 16245221 16245712 16245537.1 16245062 16245921 + gene protein_coding_gene TRUE TRUE AT5G40500.1|AT5G40500.2 similar to Os04g0482900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053120.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55654.1) -0.134205525634768 -1.38424951088287 0.194780521045760 1 0.935584965723556 18.8808138320963 -0.134205525634768 0.090622744508129 AT5G28040_at 6.82527782196012 7.01896098514564 7.57959407901931 7.58972945132335 7.89402679835582 7.13938423287897 7.1039805259433 6.78034109531056 6.60263024501453 6.99775966396332 8.0061649869747 8.07664765341418 8.00194637956126 7.79425360118229 7.81743886499543 7.90960689825348 7.66393637062278 7.57184405378221 6.76297964198972 0.155745117512060 0.155389218167905 0.153393626795356 0.160515795111666 0.15887728189685 0.161922326342545 0.155047027209996 0.158250684182961 0.180438639493384 0.154715536028572 0.154970638100447 0.153937246116667 0.161032659100078 0.162910345957561 0.154085220696646 0.152078465304618 0.162555425396623 0.154734812174178 0.160790390587929 5 5 - 10037815 10038176 10037995.818 10037273 10039005 - gene protein_coding_gene TRUE TRUE AT5G28040.1 transcription regulator similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G04930.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96171.1); similar to hypothetical protein [Oryza sativa] (GB:AAG46131.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Protein of unknown function DUF573; (InterPro:IPR007592) -0.165750812428451 -1.38345988294760 0.195015362554698 1 0.934655264210611 14.5629217244525 -0.165750812428451 0.146007664484494 AT5G54090_at 6.20232714057002 6.09403539217247 7.33731552630446 7.31477963267982 7.96435358823845 7.70147430107995 6.25704710343896 5.88346797701786 5.2211812030326 6.20886686389707 6.77019056255744 6.9829404695045 7.07231123175785 6.47146522317878 6.1348726975898 6.96361660808642 7.27795520507155 6.29198884499005 6.16451931946166 0.250205784844835 0.254786101182155 0.267392987827922 0.268603716674843 0.254481395967211 0.259239090337529 0.25968171317985 0.261248190069234 0.27504702524285 0.259102303112984 0.250205784844835 0.250205784844835 0.250456384289873 0.253588310645264 0.258669200044631 0.251488100584958 0.259904230105350 0.262310171474777 0.260225997686566 5 5|0 -|/ 21965509 21966225 21965853.7 21965350 21969776 - gene protein_coding_gene TRUE TRUE AT5G54090.1 DNA mismatch repair MutS family protein similar to DNA mismatch repair MutS family protein [Arabidopsis thaliana] (TAIR:AT1G65070.1); similar to putative DNA mismatch repair protein [Oryza sativa (japonica cultivar-group)] (GB:AAM94926.1); contains InterPro domain DNA mismatch repair protein MutS, C-terminal; (InterPro:IPR000432); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain MutS 2 protein; (InterPro:IPR005747) 0.129664502305328 1.38254628040334 0.195287371948258 1 0.933580038597432 13.1496117830907 0.129664502305328 0.081336033052927 AT5G43310_at 4.6912229137558 5.27808029668243 5.6251112529815 5.82365013486136 7.12912246046909 6.43998585400482 4.69161025736549 4.39858349955175 6.46355099682757 6.6048849153513 8.06241922482422 7.5768313621447 7.40593036224909 7.28395568779069 6.94884851918751 6.90190164200261 6.32848111377497 6.89453742760408 5.62588466553249 0.280570501870349 0.276845597858436 0.273882637408808 0.279406609912168 0.271288441008259 0.274201198029078 0.266569094186870 0.287468938481198 0.274513570821925 0.260654802146851 0.265851229301863 0.266158072731473 0.265337434353329 0.26082774350927 0.279835223841765 0.264650624730717 0.282561462719521 0.272396156253491 0.260067241011475 5 5|0 -|/ 17396978 17397734 17397431.5 17396819 17402615 - gene protein_coding_gene TRUE TRUE AT5G43310.1 COP1-interacting protein-related similar to disease resistance protein (TIR class), putative [Arabidopsis thaliana] (TAIR:AT1G61100.1); similar to Os03g0861100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051978.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP44760.1) 0.180183141859828 1.38237846970370 0.195337369326823 1 0.933382592583908 12.2130725137179 0.180183141859828 0.168192149034528 AT5G03550_at 1.41322562178438 1.21736131839551 1.16650897401958 1.43126046745912 0.972731758771736 1.5132480674986 1.16612200094883 1.37364277879208 1.59832194269832 1.29432087456848 1.45553511460632 1.32225555584699 1.28393000426672 0.542006241200463 1.27527125319891 1.46847031754013 1.39879878780421 1.94215290491288 1.39943267962327 0.221229389296571 0.215794869570338 0.214611182748297 0.224532004264913 0.222370979339268 0.211835405886222 0.220052504505267 0.214952959155103 0.217952807789170 0.212914828625537 0.222343200360955 0.221834247780718 0.220546419614444 0.223739964601869 0.213836311933421 0.22381384931629 0.225014940991137 0.216881494400292 0.220799454661079 5 5 - 895817 896115 895974.091 895812 896144 - gene protein_coding_gene TRUE TRUE AT5G03550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58300.1) -0.147059626399818 -1.3823119610273 0.195357187841379 1 0.933304342933794 2.66513480081811 -0.147059626399818 0.115270376411309 AT5G35740_at 2.66061882538707 2.84328557748091 2.42982443978539 2.65333447168710 2.53938516824270 2.73575981218652 2.79854572246522 2.47719504728998 3.41220061608848 2.93809738576422 4.04642161740923 4.34576218828332 2.74644684366447 3.39466029376764 4.74956966289172 3.88543332826932 3.07232124656695 3.14610477965967 2.56618297626003 0.226557717110294 0.228077233296238 0.234588329556482 0.234393768643873 0.232533758830370 0.235163531816123 0.238859967255523 0.226557717110294 0.228104686864845 0.233206128623876 0.236966389675484 0.240383419275208 0.233439173883755 0.242561800286326 0.275976660020633 0.240884134518596 0.232711528222709 0.230710326548897 0.226557717110294 5 5|0 -|/ 13927931 13928279 13928078.667 13927648 13928390 - gene protein_coding_gene TRUE TRUE AT5G35740.1 glycosyl hydrolase family protein 17 similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT2G04910.1); similar to Glycoside hydrolase, family 17 [Medicago truncatula] (GB:ABE89104.1); similar to Putative glucan endo-1,3-beta-glucosidase 1 precursor ((1->3)-beta-glucan endohydrolase 1) ((1->3)-beta-glucanase 1) (Beta-1,3-endoglucanase 1) (Beta-1,3-glucanase 1) (GB:O65399); contains InterPro domain X8; (InterPro:IPR012946) -0.129927224154940 -1.38157275194564 0.195577573989598 1 0.932434808680745 5.96499379361642 -0.129927224154940 0.082114963869575 AT5G51130_at 3.84488005335171 3.97250728102738 5.08837510966025 5.16603351479525 4.61547603025916 4.51809057756665 3.59693306746325 3.74491696937321 3.24431565397257 3.25690590954204 3.86090440429997 3.74134984380065 4.11609526333472 3.81616220349137 3.85910498118632 4.34945209061688 4.142975720542 3.74880318387708 3.42736527052134 0.195997133040519 0.198299250253281 0.201614942247912 0.199873219851888 0.193359936267289 0.197295138945992 0.195579275001834 0.202555420528961 0.211888110898010 0.203166938787294 0.198881326727909 0.205190983256921 0.198394249705171 0.193636413199117 0.200239049716195 0.195892613654966 0.200039871642610 0.194572238338660 0.193193952576471 5 5|0 +|/ 20799928 20801098 20800438.8 20799042 20801297 + gene protein_coding_gene TRUE TRUE AT5G51130.1 similar to Os08g0540500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062384.1); similar to PREDICTED: similar to bin3, bicoid-interacting 3 [Macaca mulatta] (GB:XP_001104039.1); similar to PREDICTED: bin3, bicoid-interacting 3 isoform 3 [Pan troglodytes] (GB:XP_527836.2); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Bicoid-interacting 3; (InterPro:IPR010675); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.114732424087190 1.38091603020708 0.195773542688887 1 0.931662565734738 7.95034402847324 0.114732424087190 0.0401034156528752 AT5G25140_at 3.71919034231508 3.90082405744670 6.83583133196503 6.92691983521195 7.40530587561825 7.16375374078917 7.24043372542711 6.87904761630867 5.95803639326361 6.32644718482167 6.30743459041123 4.77944313183926 6.49843442480654 6.79049141404355 5.05168862050485 6.86565412972563 6.97621262571642 6.20596697280704 5.74831712279211 0.237202769865727 0.231028630430043 0.216641820929787 0.221854462689031 0.22738093958679 0.220847639628062 0.227452656259405 0.223413891555351 0.230381101145343 0.218185846481326 0.219886461190356 0.230978118555322 0.220938403039225 0.223135634196385 0.225481774989259 0.216641820929787 0.220234694816923 0.220528702388300 0.226522047045942 5 5 + 8673969 8674394 8674089 8672427 8674632 + gene protein_coding_gene TRUE TRUE AT5G25140.1 CYP71B13 (cytochrome P450, family 71, subfamily B, polypeptide 13); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B13 (EC 1.14.-.-) (CYP71B13) [Arabidopsis Thaliana] (GB:P58050); similar to CYP71B14 (cytochrome P450, family 71, subfamily B, polypeptide 14), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25180.1); similar to CYP71B12 (cytochrome P450, family 71, subfamily B, polypeptide 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25130.1); similar to CYP71B11 (cytochrome P450, family 71, subfamily B, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G25120.1); similar to Cytochrome P450 71B1 (CYPLXXIB1) (GB:P49264); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.129574543191277 -1.37336238382218 0.198039460609088 1 0.92279790090806 12.3565879684807 -0.129574543191277 0.0830365392307002 AT5G10630_at 6.33159841771088 6.32510508771406 6.85114786519844 7.07600832493773 7.84924558030835 7.39501888479832 6.93278899645038 6.98400130836319 5.13228094572516 5.49563053624776 6.62314691831163 6.75413456515799 6.57142563442098 6.70020112276906 6.67814894656012 6.65263504691704 6.04014375477323 6.26749292041628 5.44215413683292 0.281062503840752 0.260154877828365 0.262770681989018 0.260154877828365 0.260154877828365 0.272255322817529 0.263398909627788 0.267191929108931 0.273979359817421 0.267664666158436 0.26212870133288 0.260154877828365 0.260550290598986 0.264967502060028 0.2697011084475 0.260154877828365 0.275646981101163 0.263657221289055 0.261301278732431 5 5|0 +|/ 3363287 3364342 3363851.667 3360174 3364597 + gene protein_coding_gene TRUE TRUE AT5G10630.1 elongation factor 1-alpha, putative / EF-1-alpha, putative similar to translation factor, nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G18070.2); similar to Os04g0595300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053733.1); similar to putative translation elongation factor eEF-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD52510.1); similar to Zinc finger, RanBP2-type; AAA ATPase; Translation elongation factor Tu [Medicago truncatula] (GB:ABE92795.1); contains InterPro domain Elongation factor Tu, C-terminal; (InterPro:IPR004160); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain EF-Tu/eEF-1alpha/eIF2-gamma, C-terminal; (InterPro:IPR009001); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) -0.131945718426705 -1.37313170701616 0.198109002883309 1 0.922527701669858 12.9144166348190 -0.131945718426705 0.0881643423879601 AT5G41780_at 1.17681384495896 1.01498097195423 1.29497501977955 1.60353248840533 1.27613075674046 1.38509474568449 2.29015352448774 1.89258467700411 1.69282642677507 1.93015350120582 1.91285151849444 1.39806408687233 1.77380531086036 2.55962141369953 1.21867813207483 2.70604674232288 2.32476023881181 2.07203505024394 1.8027831049509 0.187475573826381 0.185852681156625 0.191625066970986 0.192810941575603 0.185626780870616 0.195148327468419 0.188276221841465 0.184593116570406 0.189398679067761 0.18973174997075 0.187394695481173 0.194381040218612 0.189180048405858 0.184593116570406 0.196458684946307 0.194544933145244 0.196251049158957 0.188303580466568 0.185620809327598 5 5 + 16741462 16742037 16741745.455 16740303 16742061 + gene protein_coding_gene TRUE TRUE AT5G41780.1 myosin heavy chain-related similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT1G64320.1); similar to putative myosin heavy chain-like protein [Trifolium pratense] (GB:BAE71306.1) -0.134483886166903 -1.37304771329869 0.198134329601907 1 0.922429324682769 3.39394349828508 -0.134483886166903 0.0934065220452494 AT5G12910_at 1.99350467277990 1.79883265496501 1.85358419534352 2.01663336807768 1.63541116866745 1.74696753562118 1.49217366797896 2.26343586967586 1.9138896695952 1.89280752308144 1.70445557705970 1.69590634337334 2.19072900937293 1.70879193372605 1.98661256637201 1.92823598967164 1.82180467903492 2.07468703217921 1.72256174577270 0.181307888199515 0.180559538214347 0.185630953966137 0.184887108755634 0.179032067296184 0.183708150291860 0.181714285866492 0.185787629507932 0.179780587918552 0.187693126800269 0.18357290288485 0.181835644211453 0.184358250272796 0.184619121277714 0.185234888976137 0.178842026201614 0.185092654937675 0.181873670271715 0.183617889451315 5 5 + 4077176 4077519 4077362.909 4077165 4077560 + gene protein_coding_gene TRUE TRUE AT5G12910.1 histone H3, putative Identical to Histone H3-like 4 [Arabidopsis Thaliana] (GB:Q9LXU8); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Lilium lon (GB:BAE20249.1); similar to PREDICTED: similar to histone 1, H2ai (predicted) [Macaca mulatta] (GB:XP_001083065.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.161867132560863 -1.37291421203118 0.198174589971058 1 0.922272970695484 3.71606249372128 -0.161867132560863 0.141838587391107 AT5G25560_at 9.46604326179929 9.08387728217492 10.2001993767864 9.87735126977871 10.2751767809175 9.861995857828 9.0382723463116 8.8158730552249 9.07594161396477 9.6006432161008 10.3158747298663 10.0758996878302 10.1754481416318 10.2882232655993 10.0422023500768 10.6384586718570 10.2752549511501 10.081042881512 9.84796379206267 0.0898933031966135 0.0871607000242278 0.0884304066705315 0.0882202642295152 0.0888358719898612 0.093539683882508 0.0924319686419924 0.093532391697774 0.110187230183808 0.0888666347202575 0.0868337141584665 0.0876692556349228 0.086104448802758 0.087509001518947 0.0896667567493733 0.0872363979986714 0.0903509600797552 0.0923055386041601 0.0869163623749244 5 5|0 +|/ 8899798 8901369 8900656.667 8897904 8901707 + gene protein_coding_gene TRUE TRUE AT5G25560.1|AT5G25560.2 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G22920.1); similar to Zinc finger, RING-type; Zinc finger, CHY-type [Medicago truncatula] (GB:ABE83637.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.147797082764179 1.37100009482187 0.198752590106091 1 0.920032320657362 19.4497153833443 0.147797082764179 0.118698552942301 AT5G33240_at 1.06720036661282 0.949362168174282 1.34666267312194 1.29757549809035 0.53719784189325 1.01839500094312 0.76215732769943 1.09463284507379 1.43390120082967 1.04052148185299 1.05658026285686 0.5962372723316 1.48186815055525 1.04639338858993 0.912994428786972 0.912302369391937 0.686491038879078 0.860798495882538 1.03306948062251 0.182554014071694 0.178237730655428 0.178842622115197 0.183547629732640 0.184919435037473 0.178877623315366 0.178977231872242 0.181499262516606 0.199637296646555 0.189315394774624 0.186319313920367 0.1807276402647 0.190700993503569 0.178237730655428 0.18936858637098 0.183529023432186 0.185016295118239 0.181273699455264 0.178237730655428 5 5|0 -|/ 12507746 12508184 12507926.75 12507395 12508221 - gene protein_coding_gene TRUE TRUE AT5G33240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G42980.1); similar to Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] (GB:ABE80110.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.139478105789720 -1.37083038393367 0.198803905274837 1 0.919833760077802 2.06583408037329 -0.139478105789720 0.103599788020247 AT5G32450_at 10.1769794340214 10.3992319711685 10.7573201967494 10.7879815536523 11.1682583602985 11.0512535845954 10.3813688146162 10.5259555399560 11.0981978122368 10.7679339893307 11.8126144541897 11.2100749268701 11.5320279465555 11.4515819809397 11.3167565170136 11.1926972792994 10.7969093812674 11.4054130171975 11.0384093747242 0.0667328989226555 0.0666688459178976 0.0685675038683339 0.0686933203347622 0.068095842645062 0.0712690868567145 0.069939060505901 0.0678033989976396 0.078398386796343 0.0690109576819496 0.0696565546541918 0.0669819260619257 0.066351673829896 0.0693932184905061 0.0689422681107024 0.067373771138601 0.0756128562983039 0.0709312653500224 0.0677068651272196 5 5|0 +|/ 12097608 12098288 12097978.556 12096841 12098803 + gene protein_coding_gene TRUE TRUE AT5G32450.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G17720.1); similar to RNA-binding re (GB:ABD28433.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.116724190687282 -1.37023633245139 0.198983614942918 1 0.919138854356779 21.8100135968891 -0.116724190687282 0.0504334105944516 AT5G49630_at 10.2273863127033 10.3922391325618 10.7753922426120 10.9179508486068 10.7105698102140 10.1456635875816 10.7633252636520 10.8814328941625 9.75377442220196 9.98920428508612 11.0097877870260 10.4116898693170 11.0352909809537 10.7924744405522 10.1391286989899 10.6487873396028 10.7774436189285 10.9209874797884 9.70294738478346 0.0974783705610534 0.097976807707541 0.104742171105176 0.102421548560198 0.0987790577571868 0.102631798664339 0.0981883736106872 0.101767732213372 0.116945193051100 0.105201111974633 0.101243748196699 0.097787064022598 0.0998986506822315 0.108357664858285 0.0998103375007699 0.102437366223172 0.101318667479396 0.101514621805349 0.113096028453872 5 5 - 20159948 20160464 20160203.091 20159696 20163724 - gene protein_coding_gene TRUE TRUE AT5G49630.1 AAP6 (AMINO ACID PERMEASE 6); amino acid permease Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. similar to AAP1 (AMINO ACID PERMEASE 1), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G58360.1); similar to AAP8 (amino acid permease 8), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G10010.1); similar to amino acid permease 1 [Brassica napus] (GB:CAD92449.1); similar to amino acid permease 6 [Brassica napus] (GB:CAD92450.1); similar to amino acid transporter [Solanum tuberosum] (GB:CAA70968.2); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -0.140982037015715 -1.36910497029416 0.199326245594927 1 0.917815978378967 20.8678737486377 -0.140982037015715 0.106757737848810 AT5G48180_at 8.48256061892761 8.38974976320232 9.8266917322835 9.62726301914512 8.84355067513664 8.86497215961515 8.55916471968595 8.69073010528523 8.34303084787616 8.50246522140353 8.81127735658202 8.61414549812678 8.89305324568504 9.0554776994682 8.59350170392057 9.17289404714716 9.39542329234729 8.90932843464104 8.0791198291294 0.111675778453363 0.105850051791900 0.108278626344873 0.111615604001742 0.104675686912372 0.112210582759361 0.105798981622671 0.108490701106400 0.105377931927451 0.11034922483508 0.105701219735769 0.104398123189123 0.107530918581227 0.110564192150147 0.109828947432236 0.107266870796894 0.109384562277205 0.104398123189123 0.111098014998271 5 5 - 19558517 19559033 19558756.909 19558163 19559652 - gene protein_coding_gene TRUE TRUE AT5G48180.1 kelch repeat-containing protein similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07720.1); similar to putative D-protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19903.1); similar to Os09g0249000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062670.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.114867696802323 -1.36864011459549 0.199467169275536 1 0.917272646800424 17.5300068287649 -0.114867696802323 0.0445103852690482 AT5G27840_at 7.60507094525854 7.67013242382265 8.30186066008548 8.3104666349241 8.61929706819948 8.27745174552167 7.50846754527552 7.40111673305292 7.72209152829294 7.16291419695962 8.30501542908931 8.09881344938608 8.29038028827312 8.28838138362652 8.0699499681023 8.43484677452276 8.16633174247417 8.19178636869696 7.43213592462051 0.122077910836979 0.122077910836979 0.126315410346986 0.123355122441692 0.131138330911577 0.135088920759508 0.122077910836979 0.1313303679629 0.143828035660556 0.135219947919096 0.122077910836979 0.126590463534076 0.124291574133887 0.122077910836979 0.125386836482066 0.124148778612613 0.132344683890176 0.122142377691432 0.130894454217782 5 5 - 9863487 9864205 9863870.455 9862927 9865042 - gene protein_coding_gene TRUE TRUE AT5G27840.1|AT5G27840.2 TOPP8 (Type one serine/threonine protein phosphatase 8); protein phosphatase type 1 encodes a serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 8 (EC 3.1.3.16) (TOPP8) [Arabidopsis Thaliana] (GB:O82734;GB:Q8LAG7;GB:Q94B49); similar to serine/threonine protein phosphatase, putative [Arabidopsis thaliana] (TAIR:AT3G05580.1); similar to serine threonine protein phosphatase [Phaseolus acutifolius] (GB:AAO69665.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) -0.120851242699190 -1.36861203615156 0.199475684087958 1 0.917239832203546 15.7966006655904 -0.120851242699190 0.0630378735292468 AT5G58250_at 9.36206187553997 9.46894966189625 9.61456083893128 9.6305276231259 9.9353771651104 9.59520580019781 8.98656006068774 8.88549811388139 9.13184198944638 8.99288255567529 10.1222811667751 10.5616250683659 9.78987725393106 9.9405688089545 10.8316902146525 10.0740967561337 9.83328051556107 9.9463800820305 8.8161012250769 0.131137139426968 0.130118719643047 0.133439009134902 0.135112994742221 0.129371404394877 0.141531437881585 0.128852697840953 0.135805879823744 0.150714139593364 0.135896371600276 0.129942385071078 0.126116055479012 0.131493994227349 0.131216268217087 0.130226217367516 0.126070402114399 0.144452069210801 0.132261800834643 0.137098949412530 5 5|0 +|/ 23576864 23577480 23577212.4 23576700 23577739 + gene protein_coding_gene TRUE TRUE AT5G58250.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95764.1) 0.121195649411761 1.36763547178169 0.199772017448020 1 0.916098827754665 18.9937177624380 0.121195649411761 0.0641960525417691 AT5G21010_at 6.1275138075698 6.40602522192388 6.96249832725233 6.9213897959974 7.4297958730583 7.11364600570335 6.11617096131899 5.82684796715659 5.25288757669668 5.77445994639957 6.99529245224442 7.14613488383721 7.14242375558074 6.83496733675619 7.13282131877265 6.77273924653959 7.13561590696674 6.35409842883867 5.68631226992535 0.220390824830905 0.211661268025894 0.213792020540073 0.217615305809512 0.221147367525000 0.218769579719732 0.210408720238538 0.219236306475279 0.230561187986084 0.208301717455918 0.207741814516483 0.212139730707073 0.209151509025438 0.224570842276797 0.207774126657128 0.207485787219564 0.225779518035486 0.218916124211470 0.211489408898833 5 5 + 7137564 7138339 7138082.091 7136011 7138683 + gene protein_coding_gene TRUE TRUE AT5G21010.1 ATBPM5 (BTB-POZ AND MATH DOMAIN 5); protein binding similar to ATBPM6 (BTB-POZ AND MATH DOMAIN 6), protein binding [Arabidopsis thaliana] (TAIR:AT3G43700.1); similar to Os07g0167200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058976.1); similar to Os03g0792500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051524.1); similar to BTB/POZ; MATH [Medicago truncatula] (GB:ABD28533.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.131663454764752 1.36737371998654 0.199851507247187 1 0.915793093956021 12.8682267935972 0.131663454764752 0.0887345366185589 AT5G08410_at 10.1682909680901 10.3015638515195 10.6284909994544 10.7007154845530 10.9105339114403 10.5859691451278 10.4751448606536 10.3555337445154 9.64862202692732 9.71741361557132 10.9613953031912 10.6473618772061 10.4405896002630 10.6849170938917 10.8671650956394 10.3802247734412 10.6436938801333 10.9118710262734 9.30086312440643 0.0994977757491777 0.100751243307808 0.103150459058354 0.099720946996568 0.0977320846018755 0.105370249133213 0.0985007051272081 0.101153140467931 0.101840965265434 0.102422494420554 0.0969576852828968 0.0992300627590933 0.0998229745498382 0.0986576627023861 0.100041301573141 0.100130328858283 0.105285229959573 0.100004990998985 0.103547166017577 5 5 - 2710015 2710503 2710322.364 2709849 2710584 - gene protein_coding_gene TRUE TRUE AT5G08410.1 FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2); ferredoxin:thioredoxin reductase similar to FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1), ferredoxin:thioredoxin reductase [Arabidopsis thaliana] (TAIR:AT5G23440.1); similar to Os04g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053378.1); similar to ferredoxin-thioredoxin reductase SU A [Spinacia oleracea] (GB:CAA54407.1); similar to OSJNBa0074L08.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD41197.2); contains InterPro domain Ferredoxin thioredoxin reductase, alpha chain; (InterPro:IPR004207); contains InterPro domain Electron transport accessory protein; (InterPro:IPR008990) 0.121594988307189 1.36720612172357 0.199902418035632 1 0.915597355000625 20.6396729974475 0.121594988307189 0.0653558400842625 AT5G19870_at 1.02266758553146 0.521783407866708 1.02292512596607 0.8799720439147 0.532605783433131 1.17929023078004 0.556965812050779 0.592835576202347 0.892991875998888 1.10175722410494 1.62856403002888 1.22694278290507 1.58757633368866 1.09624337977806 1.42694695477651 1.11090991674853 1.07023983392717 1.23635448612666 1.22397159318987 0.199670656475069 0.199670656475069 0.199750127716930 0.204901293147437 0.202398839136948 0.204322945151953 0.201907069776718 0.200676233188162 0.201031424098765 0.206940533304672 0.201774310661753 0.203522636516045 0.204253284807522 0.199670656475069 0.210111317461695 0.199670656475069 0.199670656475069 0.212875017386287 0.201721748924395 5 5 - 6716322 6716731 6716505.636 6716075 6717112 - gene protein_coding_gene TRUE TRUE AT5G19870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55230.1); similar to Os09g0444900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063301.1); similar to Os08g0462800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061987.1); similar to plant viral-response family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD38318.1); contains InterPro domain Protein of unknown function DUF716; (InterPro:IPR006904) 0.162391639385717 1.36680828554955 0.200023310916153 1 0.91513278476542 1.97407025197416 0.162391639385717 0.143834137618945 AT5G67450_at 2.34998672903362 2.32596244765404 2.9527231175698 3.22398164841451 1.96694651327345 1.47834936085503 1.17324416113328 1.25252717795324 2.20691101991774 1.22373108402536 1.20839824815577 1.73103932475501 1.18091487068714 1.43147130110422 1.79815637289413 1.4580851154347 1.69963450124005 1.21947780399165 1.20301484939617 0.196694793248503 0.196334841650725 0.19731310053885 0.197314676152095 0.203403984714954 0.204795729618799 0.193676223299339 0.193676223299339 0.198336625839762 0.195138495263617 0.196374914465165 0.20111735145299 0.196704233618815 0.194472072656163 0.198103377097158 0.193790756542631 0.193676223299339 0.194593463357503 0.193720018989077 5 5 - 26936393 26936812 26936611.091 26936019 26937175 - gene protein_coding_gene TRUE TRUE AT5G67450.1 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G49930.1); similar to zinc-finger protein-1 [Brassica rapa] (GB:AAB53260.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.136023541638482 1.36650054791590 0.200116866965969 1 0.914773489065025 3.59568989951716 0.136023541638482 0.0977676654930899 AT5G49930_at 8.0361211150474 8.1362844989161 9.11286591667026 9.1686451042716 9.21264391156567 9.0348426830505 8.00891389929678 7.86537236489532 7.40847971347142 7.52102606875701 8.45463993489928 8.53086591629728 8.25969309895325 8.43540914238401 8.33930724925474 8.57016865232058 8.43212306439025 8.40236676201618 7.80130656609096 0.140797443113565 0.138255868550383 0.139749324427199 0.139851216360635 0.138255868550383 0.139050141429845 0.144149875502926 0.146588227963899 0.162065532189615 0.154738223950798 0.139043801413011 0.141298743915991 0.138323270706087 0.151461145674712 0.142705984995758 0.141544493484582 0.142649467130248 0.145394443633405 0.141205968360541 5 0|5 /|- 20325536 20326185 20325785.6 20325261 20330034 - gene protein_coding_gene TRUE TRUE AT5G49930.1 EMB1441 (EMBRYO DEFECTIVE 1441); nucleic acid binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PREDICTED: similar to serolo (GB:XP_863424.1); similar to PREDICTED: similar to serolo (GB:XP_877430.1); similar to PREDICTED: similar to serolo (GB:XP_851229.1); contains InterPro domain Protein of unknown function DUF814; (InterPro:IPR008532); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.114599675211546 1.3663171444547 0.200172641298038 1 0.914559384354742 16.5744657752163 0.114599675211546 0.0442429639906771 AT5G47320_at 7.41152972570474 7.85298964042258 8.32631906860782 8.57785118691495 8.50923060199462 7.79046011917324 7.61253441598996 7.90343846525635 7.36045171903738 7.27073928644596 8.27124499196467 8.48055640933634 7.83654705692082 8.37704521768618 8.3686970038911 8.2612848442551 7.62358351209303 7.6748358163857 6.90257160778453 0.198503457808868 0.195841071166822 0.197694463645749 0.20195041066983 0.195567756981287 0.220177163989411 0.192888341547245 0.197647152843018 0.214504011665466 0.203722530883033 0.198248613896734 0.194987662482184 0.194679838351759 0.204388999667665 0.194702562880931 0.192237442408319 0.199691281427556 0.202785502033822 0.202951974103148 5 5 + 19221076 19222072 19221641.455 19220378 19222499 + gene protein_coding_gene TRUE TRUE AT5G47320.1 RPS19 (40S ribosomal protein S19); RNA binding Nuclear encoded mitochondrial ribosome subunit. Identical to 40S ribosomal protein S19, mitochondrial precursor (RPS19) [Arabidopsis Thaliana] (GB:P39697;GB:Q41991;GB:Q94AL0;GB:Q9LVS7); similar to GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4), RNA binding [Arabidopsis thaliana] (TAIR:AT3G23830.2); similar to glycine-rich RNA-binding protein PsGRBP [Pisum sativum] (GB:AAB71417.1); contains InterPro domain Ribosomal protein S19/S15; (InterPro:IPR002222); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Ribosomal protein S19, bacterial and organelle form; (InterPro:IPR005732); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.172928786906243 -1.36606092835040 0.200250580260898 1 0.914260310866041 15.642866766836 -0.172928786906243 0.160429367818529 AT5G05010_at 8.85978860611472 8.97070224200869 9.20745618888897 9.28151433978614 9.47774176688538 9.24949017920858 8.96752843239686 8.78030516980788 8.88391408036177 8.89163963450201 9.7513896394423 9.9579723983421 9.67464985517007 9.59036148746855 9.9348676037986 9.64651065334897 9.63761927740194 9.59604456672326 8.83498851061044 0.109284564572546 0.110361798365658 0.108599274321999 0.11007782520583 0.109672552293767 0.116059859831001 0.108130617557196 0.117338715712757 0.125709863187598 0.111731559158469 0.108208556537659 0.104057442036080 0.109836345634797 0.108115083634404 0.107713854693365 0.106154927748917 0.111918525426808 0.108909510409481 0.115977038087292 5 5|0 +|/ 1478880 1479830 1479364.556 1476587 1480198 + gene protein_coding_gene TRUE TRUE AT5G05010.1|AT5G05010.2 clathrin adaptor complexes medium subunit-related similar to delta-COP [Zea mays] (GB:AAF67098.1); similar to Os05g0310800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055159.1); similar to Os05g0311000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055160.1); contains InterPro domain Clathrin adaptor complex, medium chain; (InterPro:IPR001392); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) -0.117995392710903 -1.36403483311526 0.200867797272831 1 0.911896645190518 18.3962447041555 -0.117995392710903 0.0560595035718921 AT5G39310_at 2.40020892572562 2.17670755233075 2.27027445278119 2.21132008350758 2.11226679270002 1.91509850479319 1.82217594123795 1.98744291575964 2.15617030193159 2.20943234275156 2.36043751177371 2.30463428826544 2.21712619482592 2.49723473646309 2.19877618039833 2.70938923528354 2.48183403404769 2.42432163456885 2.37423597364704 0.191802330916407 0.201010284696897 0.194809662831263 0.195080615874146 0.193068416002422 0.206822592494068 0.200583074669347 0.199806024587024 0.198817192691616 0.198033577642591 0.196548348289985 0.193575771606504 0.197656980569425 0.19099913103659 0.194647595726482 0.19099913103659 0.196659099422500 0.201004267274991 0.196683024606741 5 5 - 15756549 15757058 15756917.182 15756508 15757742 - gene protein_coding_gene TRUE TRUE AT5G39310.1 ATEXPA24 (ARABIDOPSIS THALIANA EXPANSIN A24) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A24 precursor (AtEXPA24) (Alpha-expansin-24) (At-EXP24) (AtEx24) (Ath-ExpAlpha-1.19) (EXPA24) [Arabidopsis Thaliana] (GB:Q9FL76;GB:Q4PSD6); similar to ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25) [Arabidopsis thaliana] (TAIR:AT5G39300.1); similar to Expansin-A24 precursor (AtEXPA24) (Alpha-expansin-24) (At-EXP24) (AtEx24) (Ath-ExpAlpha-1.19) (GB:Q9FL76); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) -0.119284571846365 -1.36387583673692 0.200916300181706 1 0.911711258614413 4.43485294596952 -0.119284571846365 0.0598521477828245 AT5G55330_at 1.85024789933533 1.98187664975368 2.26629947117260 2.07672006664193 2.10542008844656 2.42281279383015 1.94960606094724 1.92394458788481 2.56169513752284 2.38802323337928 2.19750898380058 2.03819749958079 2.48891461984197 2.19143010199598 2.72216844173994 1.93743534911393 2.10202907837027 2.62679297408494 2.26703353752545 0.223620079451851 0.217526790205892 0.232198757833213 0.220169129563207 0.223281304549248 0.216052285265833 0.218398294033718 0.225495182506035 0.224251431563845 0.226969544784386 0.218139238450689 0.217528407823493 0.220009928408154 0.21879566691733 0.217559442591549 0.221273361124013 0.216053320426780 0.219641283616648 0.221540599529296 5 5 - 22455163 22455596 22455349.545 22455051 22456091 - gene protein_coding_gene TRUE TRUE AT5G55330.1 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein [Arabidopsis thaliana] (TAIR:AT5G55340.1); similar to wax synthase isoform 2 [Vitis vinifera] (GB:AAO18665.1); contains InterPro domain Membrane bound O-acyl transferase, MBOAT; (InterPro:IPR004299) -0.122215704914240 -1.36249926890535 0.201336640906778 1 0.910106819718656 4.41893775252249 -0.122215704914240 0.0680576094561747 AT5G28890_at 2.15177501714650 1.82037139879722 1.89042703874566 2.15867762688257 1.83645741340413 2.20541486059938 1.90957969100670 2.32491601812588 2.66945352009137 1.73828365451511 2.21107166854292 2.28551619048980 2.27966747073886 2.47064435365987 2.36278473796572 2.31076015260388 2.21885154911689 2.34019224930105 2.15422810766067 0.175876114804781 0.178201884362522 0.186767470739802 0.180908878318156 0.186616292233410 0.176179818831738 0.191299678281679 0.187303573314282 0.182149665428941 0.173930707948767 0.183538206861757 0.178432208701677 0.173284864281180 0.175031078932239 0.180567721316488 0.178241811158644 0.181499365805232 0.183972958702403 0.189173782829142 5 5 - 10904185 10904675 10904420.818 10904106 10904804 - gene protein_coding_gene TRUE TRUE AT5G28890.1 DNA binding similar to DNA binding [Arabidopsis thaliana] (TAIR:AT4G01980.1); similar to hypothetical protein 24.t00018 [Brassica oleracea] (GB:ABD64940.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.148246373852861 -1.36199027391619 0.201492250670621 1 0.909513845701025 4.28583128674255 -0.148246373852861 0.121190243927373 AT5G07260_at 1.12378801455378 0.96487788309685 1.37990657877744 1.17202434655775 1.08066318816792 0.976516711254217 0.944429999570575 0.728473482316396 1.19981023577362 0.9209456077718 1.08756645093123 0.584034975645362 0.889340907103738 1.04493431790222 0.612622504279773 0.627614349524547 0.903066185607876 0.927633716669955 1.33398954923362 0.215195039686368 0.215195039686368 0.223435855444393 0.218887466533156 0.222364390553151 0.221320767632001 0.226101900232680 0.215195039686368 0.22139740811708 0.218620572796607 0.217736183987239 0.215195039686368 0.227206858921762 0.224121205925642 0.222839487356825 0.223487740554756 0.224360196123208 0.218933184973916 0.215195039686368 5 5 + 2279481 2280059 2279842 2277815 2280282 + gene protein_coding_gene TRUE TRUE AT5G07260.1 homeobox protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26920.1); similar to baby boom interacting protein 2 [Brassica napus] (GB:ABA70760.1); contains InterPro domain Lipid-binding START; (InterPro:IPR002913) -0.119591726710060 -1.36102279462438 0.201788305159471 1 0.908387155895875 2.03942676231242 -0.119591726710060 0.0614164049285507 AT5G61280_at 2.44962264431147 2.20565503214625 2.36204060678138 2.68549771852412 2.1273280317929 2.75322577364065 2.5624621888729 2.31044517471471 2.28021746012395 2.92935664875422 3.36135049696654 3.97301218033225 2.82936798086761 3.57266011887882 3.33874240342222 3.65238263792525 3.11227862277527 3.73787799188047 2.45207773009003 0.226175056406195 0.222971750351000 0.224923396917846 0.228740345438328 0.225783676499775 0.236198492011305 0.228508071551937 0.231585735707800 0.227254349808921 0.219080552992378 0.232201357354025 0.226886093751376 0.230227381180599 0.239235863464582 0.231198684697114 0.229388491271221 0.228940348718758 0.224658466624420 0.236333745848542 5 5 - 24660853 24661703 24661303.636 24660851 24662136 - gene protein_coding_gene TRUE TRUE AT5G61280.1 remorin family protein similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT1G13920.1); similar to Os10g0325400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064352.1); similar to Os03g0211500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049348.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF94601.1); contains InterPro domain Remorin, C-terminal region; (InterPro:IPR005516) 0.156918293165061 1.36026421651559 0.202020688737931 1 0.90750412403538 5.43258114657494 0.156918293165061 0.136198006730775 AT5G24520_at 9.4500529972321 9.52941405126228 10.1621064026042 10.4027956121660 10.7249888380032 10.5298943354637 9.1792102928571 9.37385849547286 9.5436634891234 9.11223223893701 9.8688080542475 9.66921993591462 9.75068664194515 10.0866526719414 9.34047870854567 10.0685065053510 9.47840837977457 9.9373603532357 8.99314875339953 0.112886262813832 0.111067468052127 0.118036503207730 0.116722817521586 0.116866884972693 0.123083305857925 0.119986737166801 0.11694704816668 0.127515050138006 0.125939562254206 0.114913649695180 0.111067468052127 0.114100217220096 0.114888644646271 0.118867238626137 0.113356656137384 0.121586983224710 0.120706566925478 0.124127887790731 5 5 - 8371752 8372278 8371986.273 8370590 8372850 - gene protein_coding_gene TRUE TRUE AT5G24520.1|AT5G24520.2|AT5G24520.3 TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Identical to TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein) (TTG1) [Arabidopsis Thaliana] (GB:Q9XGN1;GB:Q5PP66;GB:Q9FT87); similar to ATAN11 (ANTHOCYANIN11), nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G12910.1); similar to transparenta testa glabra 1 protein [Matthiola incana] (GB:CAE53274.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.120741034382819 1.35998894144854 0.202105072037727 1 0.907183769360842 19.4147217865607 0.120741034382819 0.064792567496838 AT5G51930_at 1.51941154966406 1.04465565040298 1.94474013900283 1.32311147434680 0.986090963472265 1.83956392403988 1.32903812739517 1.18133733321274 1.61207074678052 1.25465195780722 1.88337494173216 1.39947111135940 1.96233201847074 1.45250052750464 1.41032915464436 1.41551615575913 2.10550587309426 1.45225407661133 1.01348058348676 0.212550871110584 0.214979842702819 0.207807405226659 0.207807405226659 0.21487306264298 0.211371470024479 0.214339549775614 0.219733053782305 0.212941159737035 0.219180096305549 0.212611931918582 0.218109538430763 0.212477571877084 0.207807405226659 0.217240029370062 0.208886104099132 0.209661055229354 0.224446565332812 0.218698072327288 5 5 + 21120255 21120627 21120497.364 21118349 21120794 + gene protein_coding_gene TRUE TRUE AT5G51930.1 glucose-methanol-choline (GMC) oxidoreductase family protein similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT5G51950.1); similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT3G56060.1); similar to putative mandelonitrile lyase [Oryza sativa (japonica cultivar-group)] (GB:BAD29242.1); similar to Os04g0573100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053612.1); similar to Os10g0524500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065107.1); contains InterPro domain GMC oxidoreductase; (InterPro:IPR007867); contains InterPro domain Glucose-methanol-choline oxidoreductase; (InterPro:IPR000172) 0.200368853530078 1.35970753557890 0.202191365111905 1 0.906856325340218 2.86027443440301 0.200368853530078 0.201966505742826 AT5G56580_at 0.740002155976136 0.754620357498467 0.890665517115716 0.872569676719318 0.184105986497379 0.363012105459365 0.387905187022161 1.23143441875676 0.701670888514141 0.945468478577788 0.927178538088086 1.91150955267447 1.55164490442246 0.943481927717388 2.01489838982841 1.49589225922118 1.27126628652649 1.47242969290984 0.741573805430123 0.215403268697074 0.213976245325456 0.219035244871328 0.220092441869217 0.21508469199839 0.214355663054076 0.227763086806560 0.219575885957767 0.219463897559257 0.219950012074683 0.216226301456058 0.221160700574608 0.215526366233389 0.224900470722047 0.213976245325456 0.225633357069053 0.213976245325456 0.214098115639784 0.214191587099480 5 5|0 -|/ 22922087 22923006 22922452.125 22921915 22923887 - gene protein_coding_gene TRUE TRUE AT5G56580.1 ATMKK6 (ARABIDOPSIS NQK1); kinase member of MAP Kinase Kinase Identical to Mitogen-activated protein kinase kinase 6 (EC 2.7.12.2) (MAP kinase kinase 6) (AtMKK6) (Protein Arabidopsis NQK1 homolog) (MKK6) [Arabidopsis Thaliana] (GB:Q9FJV0); similar to ATMKK2 (MAP KINASE KINASE 2), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G29810.1); similar to double MYC-tagged mitogen activated protein kinase kinase 6 [synthetic construct] (GB:ABF55666.2); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.164954296171722 1.35963007261712 0.202215124519681 1 0.90676619746307 1.80042713467944 0.164954296171722 0.149278092062878 AT5G35520_at 3.03427820242367 3.09582437670901 3.62863697317853 3.5501720749934 3.67720898919778 3.29178642026686 3.05663820736419 2.71504572958371 3.64012762563496 3.26857144879911 4.00386031162838 3.85159246203653 3.79190298381696 3.96530315525105 3.81650068368268 3.63970666212272 3.81265303535688 3.94815076436254 3.61378016073912 0.248256617305979 0.243215719380051 0.257732846501854 0.252617738962333 0.263794662541673 0.249608373390211 0.249285470305737 0.251794183854844 0.246821178359026 0.254256349149316 0.260611402490196 0.248697250387219 0.250204493115201 0.259584158792000 0.247538793036131 0.253917498043073 0.248246915127409 0.243215719380051 0.243943344812757 5 5|0 +|/ 13719022 13720635 13720043.667 13718626 13720719 + gene protein_coding_gene TRUE TRUE AT5G35520.1 kinetochore protein-related similar to Mis12 [Medicago truncatula] (GB:ABE85102.1); contains InterPro domain Mis12; (InterPro:IPR008685) -0.131677565017772 -1.35739451897003 0.202901817786700 1 0.904166640403077 6.93679978955128 -0.131677565017772 0.090780433764827 AT5G11320_at 0.538763683374192 0.797713865338855 1.55031152298259 1.11121469374600 1.01303645587305 1.36829228144537 0.989128347247018 0.785274778053095 1.06222474245317 1.01025119955759 1.10078081453429 0.840267165032079 0.909617082750275 1.38046912973472 0.965267692903246 0.877207522722195 1.42790695099437 1.09519570041877 1.32381758646677 0.201754317618605 0.204789711001757 0.20372294246819 0.203457551804015 0.205585771656409 0.201754317618605 0.201754317618605 0.201754317618605 0.212708783546223 0.214187890800163 0.201754317618605 0.208846012020391 0.207939690211423 0.214576997301529 0.208650506111915 0.201754317618605 0.203448980342448 0.211447639927304 0.208713933722859 5 5 - 3611450 3612563 3612196.091 3611248 3613362 - gene protein_coding_gene TRUE TRUE AT5G11320.1|AT5G11320.2 YUC4 (YUCCA4); monooxygenase Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development. similar to YUC (YUCCA), monooxygenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G32540.1); similar to flavin monooxygenase-like protein [Solanum lycopersicum] (GB:CAJ46041.1); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.143241579446048 1.35736706168585 0.202910263904999 1 0.904134730449468 2.12256037861356 0.143241579446048 0.113165604094237 AT5G06160_at 4.7618682266022 5.26188974780267 5.57496016326088 6.04251944061207 6.49842390296847 5.5891720111514 5.13528993094428 5.05011981721516 4.73520986004485 4.29340833366122 4.99718699476847 5.87194347963193 4.83324083113591 4.78901155724511 5.19756927123975 5.42220615825335 4.83858488280557 4.73965650948829 4.36671871618945 0.218626400782357 0.216298260969047 0.225157098519373 0.225743725861109 0.238486861829831 0.221482421958195 0.230867838166163 0.222403870046867 0.226511318315715 0.222135702273492 0.216298260969047 0.223080867821376 0.218616127682068 0.221867872544131 0.226491877141477 0.216298260969047 0.226847792298371 0.228816253363946 0.224157469670248 5 5|0 -|/ 1862632 1863453 1863118.7 1862370 1866434 - gene protein_coding_gene TRUE TRUE AT5G06160.1 splicing factor-related similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT4G01000.1); similar to Zinc finger, U1-type [Medicago truncatula] (GB:ABE80846.1); similar to Os03g0717600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051082.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690); contains InterPro domain ATPase, F0 complex, subunit F6, mitochondrial; (InterPro:IPR008387) -0.196831857910852 -1.35688865323971 0.203057473937212 1 0.903578810247342 10.2649240370044 -0.196831857910852 0.197511871553036 AT5G41640_at 1.0386354213826 1.27963884286131 1.58623575201742 1.81003443599052 1.05148573030023 1.07454156367077 1.25037560516436 1.22236519719784 0.719609149246241 0.739514472378513 0.702961367581519 0.892177689804397 1.39162875244305 1.19789755777941 1.39204981179828 1.04432313692344 1.55192577076793 0.951313884309497 1.34786052351911 0.219487399325008 0.215827198923399 0.221546233022514 0.216915593162062 0.221687292408476 0.223410178498471 0.223930348326762 0.21953016978021 0.228614441813971 0.218634629366316 0.220756844812695 0.220971920884169 0.219497485987106 0.215827198923399 0.215827198923399 0.215827198923399 0.225775917800839 0.221048448260644 0.221122808401804 5 5|0 -|/ 16670606 16671836 16671046.7 16670565 16671863 - gene protein_coding_gene TRUE TRUE AT5G41640.1 contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana; (InterPro:IPR006462) 0.117752841956717 1.35657284356303 0.203154699881746 1 0.903211906029606 2.32726213264341 0.117752841956717 0.0572611326278631 AT5G22810_at 1.50124413218065 1.53891280778330 1.93295834094927 1.81423930029241 1.36385981687674 1.50025150295659 1.41536405747235 1.50201257742025 2.27001668134582 1.96775326782834 2.03538883659858 1.99049183601780 2.00279662124348 2.09721150196195 1.89688141925408 1.742825533377 2.17434575451818 1.82907524032943 1.9971588995904 0.200953752623377 0.196743728193342 0.194131547182738 0.204328038312236 0.198162676707323 0.198233136714463 0.192301945034894 0.193641917970174 0.20652215472279 0.192301945034894 0.194941568026285 0.192301945034894 0.203565976661319 0.205545923042760 0.199927153486135 0.202289704370648 0.209168934553926 0.205502583801342 0.196993980391928 5 5|0 +|/ 7622493 7623311 7622828.4 7621571 7623370 + gene protein_coding_gene TRUE TRUE AT5G22810.1 GDSL-motif lipase, putative similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G03820.1); similar to Os06g0148200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056808.1); similar to Lipolytic enzyme, G-D-S-L [Medicago truncatula] (GB:ABE90349.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.111562318683942 -1.35626205036286 0.203250419364142 1 0.902850886561189 3.59582367157515 -0.111562318683942 0.0353064587175789 AT5G17140_at 1.75345811107455 1.39850810192662 2.13032140680339 1.74519679074231 1.46202086064910 1.57748130564347 1.41307422516413 1.60053959325978 1.92562737417869 1.75773174025612 1.31918908080024 1.58085994192143 1.95050577364838 1.73638377864974 1.95890076273984 1.24088747262358 1.26863381625113 2.02275670843386 1.84467022000487 0.207346846462638 0.212964983377143 0.220625476844376 0.207698713368553 0.205678001905989 0.218554401740919 0.22242526329963 0.221161430510479 0.205678001905989 0.212013505200995 0.209321334897218 0.210027711868302 0.216114857700871 0.211833684129622 0.211513658361480 0.213779615398608 0.216637642747802 0.205678001905989 0.210834832055863 5 5|0 +|/ 5637867 5638169 5638009 5637833 5638276 + gene protein_coding_gene TRUE TRUE AT5G17140.1 cysteine proteinase-related similar to cathepsin-related [Arabidopsis thaliana] (TAIR:AT5G17080.1); similar to cathepsin L [Dictyocaulus viviparus] (GB:AAL14223.1); similar to cathepsin L 1 [Dictyocaulus viviparus] (GB:AAK77918.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) -0.135241425367079 -1.35584720396964 0.203378244250027 1 0.902369085816578 3.37379560525629 -0.135241425367079 0.0983195505135565 AT5G09640_at 1.31240136356827 1.64324113810856 1.61105662963928 2.22021002971914 1.31934987796491 1.37487533997112 1.44436512177314 1.41351137730432 1.32025352202712 1.70520162039809 1.57745566795861 1.79056115388929 1.78442586734367 1.99128317620479 1.940135907916 1.98695287258141 2.10664214786024 2.49022233292534 1.77032900859613 0.194327220935369 0.202519032230623 0.196350081919498 0.193289023135337 0.194073063316398 0.193648524481232 0.192459640037117 0.196017123489283 0.198315600372345 0.214930899555322 0.195335375420766 0.197019166813457 0.201329382196129 0.200077778038365 0.196279160852729 0.197241333604229 0.200449845987639 0.197605756172353 0.198733723973677 5 5|0 +|/ 2990020 2990907 2990437.375 2988315 2991157 + gene protein_coding_gene TRUE TRUE AT5G09640.1 SNG2 (SINAPOYLGLUCOSE ACCUMULATOR 2); serine carboxypeptidase encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase. similar to SCPL3 (serine carboxypeptidase-like 3), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G73280.1); similar to SCPL12, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G22920.2); similar to 1-O-sinapoylglucose:choline sinapoyltransferase [Brassica napus] (GB:AAQ91191.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.147119314213926 1.35543788681037 0.203504431163083 1 0.901893804911415 3.32090366367711 0.147119314213926 0.120463679852699 AT5G52380_at 3.30204282110205 3.33106035450604 4.12584583303167 3.93190329668033 4.25097875885343 4.28786637561561 3.63745430025508 3.33797426111451 3.35510327128707 3.22396462683767 3.43975495282192 3.57700392762361 3.45947871716555 3.57574290642869 3.58244055515832 3.56487259230391 3.72722463396829 3.63218119857759 3.30112534503745 0.198390101620601 0.204254257550562 0.202499104877751 0.212550604535495 0.197210395176345 0.205074962379264 0.197006936034899 0.200555157832637 0.216203799683934 0.198815447474709 0.203886261073463 0.199402045993593 0.204880762473874 0.200273051032584 0.200095828110854 0.199017306496009 0.212051035104772 0.211585228873473 0.199625956032720 5 5|0 -|/ 21278807 21280043 21279396.1 21278579 21280377 - gene protein_coding_gene TRUE TRUE AT5G52380.1 zinc knuckle (CCHC-type) family protein similar to zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] (TAIR:AT3G43590.1); similar to Os04g0555800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053520.1); similar to putative actin depolymerizing factor [Sorghum bicolor] (GB:AAT42170.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) -0.119363528834763 -1.35490035659027 0.203670243616217 1 0.901269796925404 7.2072583417582 -0.119363528834763 0.0622767726020787 AT5G59880_at 11.6173631102068 11.7764032398786 12.4826377137929 12.4715599634473 12.3809867898522 12.1552102101941 11.8602427799997 11.8634504133172 11.7279196303989 11.6953180458599 12.5700060747795 12.3822898874926 12.3333280270978 12.1954936787149 12.2053816868578 12.2486605798189 12.3823570396815 12.2124703993446 11.6246959100583 0.085078097277491 0.081816952170062 0.087014603165777 0.0837175758947143 0.0827127376365887 0.0930603545441815 0.0827144916021928 0.0827060345115706 0.0970980331547976 0.0870478162989389 0.0830245282626463 0.0839027894574397 0.0819216445866323 0.0860630541747987 0.0857044025270009 0.0832842613627541 0.0905995056718164 0.0987187180127407 0.0854760038351475 5 5|0 +|/ 24138477 24138799 24138584.222 24137457 24139120 + gene protein_coding_gene TRUE TRUE AT5G59880.1|AT5G59880.2 ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin binding Encodes actin depolymerizing factor 3 (ADF3). Identical to Actin-depolymerizing factor 3 (ADF 3) (AtADF3) (ADF3) [Arabidopsis Thaliana] (GB:Q9ZSK4); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.1); similar to ADF4 (ACTIN DEPOLYMERIZING FACTOR 4), actin binding [Arabidopsis thaliana] (TAIR:AT5G59890.1); similar to actin-depolymerizing factor [Plantago major] (GB:CAJ38384.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) 0.114601783566734 1.35436345670595 0.203835974102039 1 0.900646688759618 24.075428252834 0.114601783566734 0.0478338343108348 AT5G53170_at 8.96144783503226 9.17633003573455 10.1821358785498 10.0792678923132 10.1140550363383 9.8878928106849 9.79309267587878 9.55724096472854 8.84996584914644 9.6977193676598 9.76815910600304 9.71992435126848 9.79535761487305 9.82150593984605 9.44586448150448 10.2161019147920 10.1203041213064 9.7234328311183 9.54798382919862 0.123382782184516 0.122563969824191 0.126282547532191 0.129872264549046 0.124946885424573 0.133023364623004 0.124461456588925 0.129058542961257 0.153812271385164 0.128237355810336 0.126907414391918 0.123982679961117 0.127555510829379 0.130270070465740 0.122806893812266 0.125076335727618 0.137169743035363 0.134536026485502 0.125904485799866 5 5|0 -|/ 21580308 21581187 21580986.2 21579973 21585229 - gene protein_coding_gene TRUE TRUE AT5G53170.1 FTSH11 (FtsH protease 11); ATP-dependent peptidase/ ATPase/ metallopeptidase encodes an FtsH protease that is localized to the chloroplast and the mitochondrion similar to FTSH4 (FtsH protease 4), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT2G26140.1); similar to AAA+-type ATPase (ISS) [Ostreococcus tauri] (GB:CAL56292.1); similar to Ftsh-like protease [Pisum sativum] (GB:CAH10348.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.1221678678653 -1.35354685019571 0.204088260150990 1 0.899699284585639 19.3147100463695 -0.1221678678653 0.0699816381137574 AT5G09430_at 1.40401395278831 0.845054280932978 1.32703928915592 1.29557366016628 1.12842854019766 1.06213009652591 1.21051991844698 1.05990309355664 1.03451285259767 0.856477842740898 1.57158988518219 1.02588030715845 1.62253484272592 1.52041526952627 1.32661748604305 0.815861545109315 0.830798577013443 1.62963007303465 0.942194690668342 0.195581594267664 0.192366802434477 0.199778055864997 0.197445127121897 0.192570581413643 0.202224979791640 0.194176894192342 0.189734278717452 0.198878062137616 0.196838163719056 0.195480871499035 0.196741671892586 0.197148746179499 0.192768128140837 0.202265814775343 0.195500737394262 0.191815690746054 0.196709507882669 0.197159524762062 5 5 + 2932483 2933336 2932704.182 2932163 2933363 + gene protein_coding_gene TRUE TRUE AT5G09430.1 hydrolase similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G39955.1); similar to hydrolase, alpha/beta fold family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96342.1); similar to putative hydrolase [Oryza sativa (japonica cultivar-group)] (GB:AAR06364.1); similar to Os07g0622700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060317.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.136288223043069 1.35276979125181 0.204328569889730 1 0.898798123618384 2.2852384174179 0.136288223043069 0.100982536258716 AT5G22000_at 9.40161445161054 9.46518773293908 10.3019788051595 10.3057782918163 10.2637771002109 10.0288136024318 9.19751422635345 9.14367575861961 9.49140010851386 9.26711360599927 10.1436136769844 9.99566013398535 9.97932600036198 10.0643360234423 9.73512562594344 10.0392347582813 9.9242392438811 10.0869296875376 9.15323423404234 0.0916125612709112 0.0940587625790542 0.0891189615645264 0.0924333764002875 0.0949455190553813 0.09411554732319 0.094725420690824 0.096458033132726 0.0980907797432602 0.094954795872836 0.0891189615645264 0.0925981185187898 0.0922557789793962 0.095894451026014 0.0945958940213764 0.0900818358344148 0.0971889177217973 0.0956436490736887 0.093091524943123 5 5|0 +|/ 7278846 7279528 7279203 7277186 7280258 + gene protein_coding_gene TRUE TRUE AT5G22000.1|AT5G22000.2|AT5G22000.3 CIC7E11; protein binding / zinc ion binding similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G14220.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABD32420.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.113056131657611 1.35139739030905 0.204753568558779 1 0.897207401329061 19.4135295594696 0.113056131657611 0.0431466695884262 AT5G54080_at 9.30040493636263 9.23032578004311 10.1084837106649 10.1194218805363 10.7000106898651 10.3244527577045 9.21637313561718 8.967611791008 8.2192811539064 8.74706084903931 9.09780564919837 8.6610407073752 9.25831248611371 9.2938069132988 8.11174176322593 9.63619077246048 9.63490753073257 9.33415511811116 8.6334264805168 0.120881895150762 0.119422755802033 0.121884271416228 0.124925917121382 0.122415634054141 0.121855215440022 0.125168567856538 0.121663768818046 0.148079457020123 0.126821849947033 0.129536345487870 0.123512966553115 0.120568203968944 0.124758619428082 0.138687189998009 0.119422755802033 0.126829404201068 0.125488410589697 0.122745001531254 5 5|0 +|/ 21964447 21965222 21964888.1 21963095 21966139 + gene protein_coding_gene TRUE TRUE AT5G54080.1|AT5G54080.2 HGO (HOMOGENTISATE 1,2-DIOXYGENASE); homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase Identical to Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) (HGO) [Arabidopsis Thaliana] (GB:Q9ZRA2;GB:Q8L9I0;GB:Q9LDB8); similar to homogentisate 1,2-dioxygenase [Lycopersicon esculentum] (GB:AAF73132.1); similar to Os06g0103300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056540.1); contains InterPro domain Homogentisate 1,2-dioxygenase; (InterPro:IPR005708); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) 0.125679412608273 1.35136086337007 0.204764890106337 1 0.897165078722754 18.5767612245846 0.125679412608273 0.078916854237076 AT5G63220_at 4.77872953037241 4.35174907244864 4.87742185747436 4.78151233068408 5.71055475089174 4.7761318121184 4.44369924810842 4.01927068048497 3.75855271855469 3.3574442614971 4.75092322872719 5.09974436974708 5.00027442507901 4.93625844127493 5.54238336915036 4.71531159435434 4.39754782218083 4.83787727318855 3.33942376825265 0.300077578306217 0.286487869107105 0.290383280529425 0.293659799429684 0.288270745472612 0.294903061697503 0.284624832518903 0.285871508665973 0.293071890725407 0.286983283800896 0.290375476749417 0.298214970341740 0.284624832518903 0.284993560617458 0.289395424365432 0.292189401702249 0.291857698506189 0.305125698435891 0.289268607609021 5 5|0 -|/ 25370844 25371606 25371265.857 25370272 25372726 - gene protein_coding_gene TRUE TRUE AT5G63220.1 similar to Protein of unknown function (DUF410) [Medicago truncatula] (GB:ABE77873.1); contains InterPro domain Protein of unknown function DUF410; (InterPro:IPR007317) 0.192852696038691 1.35063539992335 0.204989856037396 1 0.896324668794962 8.91497381777167 0.192852696038691 0.193077886934277 AT5G26700_at 1.95636834477542 1.483495205272 2.42108611727775 2.62156370695939 1.30492929702826 1.87769266819928 1.45942352229571 0.91458529029933 3.45889591931479 0.955010532014762 1.18468582782851 1.20642915360615 1.36093654441703 1.72739845929148 1.48388524581680 1.28555563112408 1.52384420495957 1.43994750955053 1.83733017414097 0.212878326746839 0.217386302320081 0.210803906782417 0.219381223156066 0.212660946156875 0.216823021779980 0.213046568599092 0.218390640433422 0.225630675971234 0.228849552317764 0.209630118107942 0.219716821710768 0.209630118107942 0.222890669699389 0.215584951850555 0.209630118107942 0.211800635837754 0.210978663261085 0.215370135397109 5 0|5 /|- 9308495 9308888 9308685 9308293 9309628 - gene protein_coding_gene TRUE TRUE AT5G26700.1 germin-like protein, putative Identical to Probable germin-like protein subfamily 2 member 5 precursor [Arabidopsis Thaliana] (GB:O65252); similar to GLP8 (GERMIN-LIKE PROTEIN 8), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT3G05930.1); similar to germin-like protein 2 [Vitis vinifera] (GB:ABH09468.1); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) -0.172629021147846 -1.34979597314099 0.205250418892193 1 0.895352622656177 3.49755845096228 -0.172629021147846 0.163140793910761 AT5G40530_at 5.22280380399738 5.66223585143317 6.89906082011663 6.94039695858243 6.98437452537124 6.03825183700606 5.50607998729378 5.00765619602811 3.8369165925424 4.0827090462554 5.23703278445668 4.95337404185886 4.70022218615847 4.68050131103151 5.26539155190304 5.07255423425595 4.649822948597 4.9354681859924 4.0564440686957 0.285609548858583 0.283393344138069 0.288262582873373 0.290141648297392 0.294682646052688 0.285836459509333 0.290867581764029 0.287590314442016 0.299749917290458 0.283659571582777 0.279916347028627 0.282230202016392 0.2820785894752 0.30286556756778 0.281467868364682 0.279916347028627 0.294570521858137 0.289448138612459 0.279984934094070 5 5|0 +|/ 16252367 16253125 16252658.5 16251725 16253484 + gene protein_coding_gene TRUE TRUE AT5G40530.1|AT5G40530.2 similar to Protein of unknown function DUF691, methyltransferases-related [Medicago truncatula] (GB:ABE86909.1); contains InterPro domain Methyltransferases-related; (InterPro:IPR007823) 0.197539665357062 1.34885489625029 0.205542862461696 1 0.894263357210847 10.4970170681600 0.197539665357062 0.200204398187909 AT5G41790_at 8.98836094315683 9.0022160451094 10.1694811297755 9.80642801790967 10.2022678355934 9.31565611382923 10.1473523131133 9.86855340583524 9.4103730104933 10.3072223696100 10.8096634689843 10.5671635532700 10.6110551408014 10.6123685487076 10.1809713607269 10.8266221116713 10.5309056786119 10.1180932874875 10.0469617862662 0.114612943535973 0.112842990599366 0.113950880874724 0.112766383216966 0.111659101461329 0.116458548313684 0.112433331705806 0.122127632871191 0.127678731476642 0.112178890693689 0.109546286673115 0.109768321370484 0.109599174803450 0.111922283052909 0.111078546582304 0.109546286673115 0.112774752278976 0.116377604605986 0.112535136360939 5 5 + 16749041 16749588 16749340.636 16745606 16750004 + gene protein_coding_gene TRUE TRUE AT5G41790.1 CIP1 (COP1-INTERACTIVE PROTEIN 1) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT1G64330.1); similar to CIP1 (GB:AAC49006.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) -0.178662511580273 -1.34790328664636 0.205838931858387 1 0.893162427920388 19.9143517001599 -0.178662511580273 0.172691621151947 AT5G13500_at 6.69988790759362 6.91110562742471 7.6819841598238 7.58811224791867 7.75058620711015 7.48338453079503 6.16349859398831 6.26392861365504 6.84772647223871 6.14176675460814 7.56954592625497 7.47677771304344 7.77145301206611 7.46069303234596 7.22901918458138 7.61742281670185 7.28845939782064 7.51942377358712 5.9191744184477 0.184967273083830 0.187983490955117 0.190589999031293 0.190214880177641 0.193835143339048 0.187364887885950 0.189710404346134 0.204090439250500 0.201056924336860 0.205966231657340 0.185975670819051 0.187300044085766 0.184967273083830 0.191003647925848 0.189460553610318 0.188901575339513 0.187786224730014 0.184967273083830 0.204698697645893 5 5|0 +|/ 4339344 4340354 4339673 4338158 4341006 + gene protein_coding_gene TRUE TRUE AT5G13500.1|AT5G13500.2|AT5G13500.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25265.1); similar to Os01g0272600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042710.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72305.1); similar to Os05g0386000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055418.1) 0.119157075750256 1.34725800319688 0.206039897513258 1 0.892416193228167 13.9650552721128 0.119157075750256 0.0635626236365809 AT5G38330_at 2.27025130837165 2.45293255313554 3.10824323221704 3.06141777443919 2.81940811936926 3.33618920295054 2.42251876161571 2.21060703651329 2.49831917576006 2.37692903789238 2.58523090697275 1.87727360844255 2.68004935956737 2.82943483889750 2.55755786128365 2.33186923409233 2.84786781627432 2.94643486446684 2.4333358022212 0.182574841492761 0.180704115486452 0.179229271361892 0.190916679907181 0.184217805481427 0.184747374349490 0.181088674137006 0.186618350493480 0.184321004439529 0.183013736704207 0.182920307432199 0.192643854774525 0.179357427291903 0.182868046970226 0.189122594123119 0.188811113118139 0.185804735734497 0.184803475204502 0.184469191040859 5 5 + 15335436 15335647 15335528.273 15334997 15335675 + gene protein_coding_gene TRUE TRUE AT5G38330.1 LCR80 (Low-molecular-weight cysteine-rich 80) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Identical to Putative low-molecular-weight cysteine-rich protein LCR80 precursor (LCR80) [Arabidopsis Thaliana] (GB:P82789); similar to LCR58 (Low-molecular-weight cysteine-rich 58) [Arabidopsis thaliana] (TAIR:AT5G38317.1); similar to hypothetical protein MtrDRAFT_AC135415g34v1 [Medicago truncatula] (GB:ABE81922.1); similar to putative low-molecular-weight cysteine-rich protein lcr19 precursor [Medicago truncatula] (GB:ABD33391.1) 0.136241248716817 1.34703447872051 0.206109549557780 1 0.892157756445817 5.2192757401803 0.136241248716817 0.102019258484727 AT5G62930_at 5.551489398824 6.5289427694177 6.41648839359975 7.029907302359 7.1872962375505 6.88896924108345 4.99541468299514 5.59254813150422 5.6785533225985 5.43653741831926 6.92330183435981 7.09534620260852 6.80230856598474 6.90481509622252 6.92543586003629 6.97473917242109 6.62832997269666 6.6443054588595 5.54201023626963 0.236262086158645 0.241297862644707 0.251156144100144 0.256913475675313 0.239458180566935 0.245936755343116 0.251131052453609 0.241104176055936 0.253130878150617 0.237960150287297 0.248041967959779 0.236262086158645 0.237455934873356 0.239027897027024 0.248160738036729 0.245133982856597 0.254379050776517 0.243532971777877 0.236262086158645 5 5|0 +|/ 25272738 25273518 25273059.6 25272114 25273843 + gene protein_coding_gene TRUE TRUE AT5G62930.1 GDSL-motif lipase/hydrolase family protein similar to carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT5G45920.1); similar to putative esterase [Oryza sativa (japonica cultivar-group)] (GB:AAK13160.1); similar to Os10g0476700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064851.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.21892572165164 1.34697657589257 0.206127595745398 1 0.892090814549356 12.4812269010639 0.21892572165164 0.230706285453654 AT5G11520_at 9.47847194415567 9.40928181715097 10.0974663877865 10.1190157101844 9.958859192623 9.49008146762042 9.19634737015007 9.11813259144765 9.03134153377666 8.94613794945308 9.49932004282383 9.42260284185187 9.4967405995635 9.50698543857972 9.6800157137254 9.4318740231699 9.24019786817227 9.54998967487294 8.70489199163343 0.105586187924193 0.100510465539409 0.102780864361194 0.100418688300972 0.102746268586710 0.107703913636205 0.101353383374631 0.0983419387523363 0.110749625210975 0.0995186112384282 0.103803287517803 0.101544090868929 0.098199585784023 0.0978827339129651 0.0978827339129651 0.0982899924704215 0.103435379712239 0.102658050167122 0.110862084482827 5 5|0 -|/ 3685260 3686169 3685629.7 3685090 3687765 - gene protein_coding_gene TRUE TRUE AT5G11520.1 ASP3 (ASPARTATE AMINOTRANSFERASE 3) Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. Identical to Aspartate aminotransferase, chloroplast precursor (EC 2.6.1.1) (Transaminase A) (ASP3) [Arabidopsis Thaliana] (GB:P46644); similar to ASP2 (ASPARTATE AMINOTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT5G19550.1); similar to aspartate aminotransferase P1 (GB:AAA50160.1); similar to aspartate aminotransferase glyoxysomal isozyme AAT1 precursor [Glycine max] (GB:AAC50014.1); similar to aspartate aminotransferase cytosolic isozyme AAT2 [Glycine max] (GB:AAC50015.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) -0.127127122392463 -1.34666318971261 0.206225289543984 1 0.891728540549788 18.7947518602895 -0.127127122392463 0.0831962440843829 AT5G08330_at 9.58538592856361 9.72433962428806 9.60727944967308 9.60263393691917 10.4504077055511 10.2599336888662 9.79602023683991 9.81473281630437 10.5087755654176 9.68503669153342 11.4222483065154 11.1099089128213 10.8354212840770 11.1505995834499 11.1367454255327 10.4418273081309 10.1365288513582 11.0571922144408 10.0637074270101 0.0989812324665404 0.0996953053334255 0.106761943912416 0.106554041246341 0.0967485049067719 0.102661447836366 0.101028146227793 0.0971969278765484 0.103074371268169 0.100260379195003 0.0993199170454453 0.0994985877706767 0.0997581223188424 0.100055139500653 0.098867232734472 0.0976250474639776 0.103618562911917 0.0978508121626578 0.0973098243403643 5 5 + 2680965 2681463 2681164 2680745 2681814 + gene protein_coding_gene TRUE TRUE AT5G08330.1 TCP family transcription factor, putative similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G23280.1); similar to unknown [Brassica rapa] (GB:ABB97033.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) -0.112082276758549 -1.34652844908711 0.206267304910715 1 0.891572798282035 20.3536661135979 -0.112082276758549 0.0409376607209015 AT5G47460_at 1.93474974023998 1.79008299153695 1.83575922070869 2.04362208828025 1.91441775661330 2.36143223837018 1.56456523399167 1.96865027977158 1.69001295898047 2.06521616300742 2.05808551412038 2.15452534663234 2.0732740475967 2.18241433308672 2.43878900602494 2.65731008033558 2.48190745978322 2.36637545400738 1.94509504939943 0.224198111152771 0.221497100701227 0.223801478835350 0.220008335999479 0.221442657880765 0.215762941946147 0.215762941946147 0.216244856021324 0.241147132429501 0.222244865369532 0.220185270521007 0.215762941946147 0.226594657846199 0.218972717541205 0.217373180974312 0.227617973137285 0.218166558855374 0.224505637346179 0.220238192826276 5 5 - 19269716 19270221 19269985.636 19269690 19271420 - gene protein_coding_gene TRUE TRUE AT5G47460.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G09950.1); similar to PPR repeat containing protein [Brassica oleracea] (GB:ABD65008.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.141923655274023 1.34513960258941 0.206700795897998 1 0.889968097243137 4.02750654985283 0.141923655274023 0.113115034974484 AT5G66380_at 6.58928964250398 6.75486923979937 7.59533899974161 7.04995776117381 7.67655452889154 7.59405555883595 5.55221997757744 5.78055591135563 5.39339902832625 5.77597764458852 6.20591579887777 5.97330952520256 6.1989866306535 6.39326810788248 6.44053214544784 6.55964937717711 5.6890341360912 6.23847332112646 5.95414792291139 0.241511592554911 0.225288746712963 0.241590854341945 0.243860119904786 0.23775265601256 0.241663576192244 0.225071647059677 0.227276729879151 0.232050569708550 0.225342164080335 0.225288816431655 0.226080981074413 0.231788217443143 0.226584475527172 0.226512244773827 0.226827678879577 0.239613975038623 0.226642466631910 0.232028204464771 5 0|5 /|- 26530918 26531934 26531411 26530750 26532921 - gene protein_coding_gene TRUE TRUE AT5G66380.1 ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1); binding / folic acid transporter Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G47490.1); similar to hypothetical protein [Thellun (GB:ABB45839.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.138723883205278 -1.34485656430690 0.20678923157102 1 0.889641208102868 12.7842240336096 -0.138723883205278 0.107210217309285 AT5G65610_at 2.12355685103062 2.57633328919361 2.67111554708369 3.11898972992802 4.37817067793695 2.81161361014729 3.61830755401597 2.26486976201588 2.86070739195561 2.47529553779443 4.61613193473569 4.54957479738175 3.48663650225954 4.06435487704236 3.76498626768164 3.54583249477074 2.20151627796199 3.18713343623363 2.79056105939617 0.253399943441719 0.253788433869166 0.261489876340327 0.25025616183171 0.259894518353878 0.254538039109389 0.246647773626352 0.246583855298505 0.248118412827211 0.250747898775706 0.248284643883449 0.258159965551940 0.245781263090726 0.251356146790255 0.247812220396635 0.243711991623996 0.253969052898459 0.250545864153645 0.249105036959631 5 5|0 +|/ 26236646 26238195 26237813 26236484 26238254 + gene protein_coding_gene TRUE TRUE AT5G65610.1 contains domain no description (G3D.1.10.260.30) 0.327734890435625 1.34459989679933 0.206869454871043 1 0.889344816036235 6.13830737094758 0.327734890435625 0.374833872701612 AT5G58730_at 4.74385633132768 5.38133965377536 5.06574292564557 5.42689923983786 5.59876906339785 5.34721327007567 4.28562599795785 4.15195750177694 3.87697821634169 4.1888190891438 4.8406491729579 5.00493829713526 4.39677167757428 5.15184766710642 4.54529745925348 4.9600257906192 4.08197395567131 4.71311593477627 3.89107190456576 0.209510497230159 0.207517536649959 0.210402632032044 0.229164130746104 0.209552643648415 0.212663599456921 0.218444564503417 0.213466055422035 0.215335978579719 0.206833561642294 0.216612142763001 0.206833561642294 0.218546912289015 0.217767102542808 0.213717030628752 0.206833561642294 0.228303709982250 0.207530142115026 0.206833561642294 5 5 - 23740858 23741979 23741414.818 23740630 23742691 - gene protein_coding_gene TRUE TRUE AT5G58730.1 pfkB-type carbohydrate kinase family protein similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G10260.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP03418.1); contains InterPro domain PfkB; (InterPro:IPR011611) -0.154889371873051 -1.34349880066893 0.207213904264652 1 0.88807374214762 9.34890078017627 -0.154889371873051 0.136039728970460 AT5G06630_at 1.69533384958352 2.06339120965514 1.77884281962507 2.77883144895495 1.66214525602201 1.06734186367550 2.10615212402168 1.10696170509893 3.51888436505759 2.54800011935212 2.53999571016293 3.22605383123889 2.32460014817559 3.07191489146499 2.36574638567939 3.18812524990363 3.07978936317763 3.61742269743197 2.96043679383232 0.3750775021254 0.407320675999577 0.393941926438333 0.39398657715916 0.386728680523088 0.3750775021254 0.3750775021254 0.389907396410588 0.384314168612232 0.382634695733344 0.3750775021254 0.3750775021254 0.3832298614627 0.389448239664139 0.389007935374799 0.3750775021254 0.405969802351331 0.377578345015324 0.3750775021254 5 5 - 2036611 2036778 2036692.2 2036362 2037844 - gene protein_coding_gene TRUE TRUE AT5G06630.1 proline-rich extensin-like family protein similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT5G49080.1); similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT5G06640.1); similar to proline-rich extensin-like family protein [Arabidopsis thaliana] (TAIR:AT2G24980.1); similar to Extensin-like re (GB:ABD65126.1); similar to extensin, putative [Brassica oleracea] (GB:ABD65124.1); contains InterPro domain Extensin-like region; (InterPro:IPR006706) -0.249352032009265 -1.34327121771089 0.207285157137715 1 0.887811115808956 4.75028159828046 -0.249352032009265 0.272944899386943 AT5G63750_at 2.06671582824279 1.71764074253179 2.43100413017079 2.08963082319208 1.81337908504218 1.97301089891977 1.67977737754200 1.98059189019688 1.76390951902261 1.80430598848557 2.24921528845718 2.25752972351191 2.39519081357544 1.69313917073443 2.26409154355193 2.11480898155672 2.75708461894142 2.05157592394349 1.91922886549841 0.195041211862063 0.200943595996502 0.196484789112725 0.205750178951905 0.198008895420123 0.206864940481890 0.196225136632340 0.199428345488313 0.197981981751137 0.198659983644244 0.200230180640049 0.196828002386937 0.203549092110803 0.200291600031951 0.202218055210735 0.201088123668495 0.205190397062429 0.196456451383946 0.199615340880751 5 5 - 25530281 25530824 25530557.182 25530220 25532167 - gene protein_coding_gene TRUE TRUE AT5G63750.1 IBR domain-containing protein similar to IBR domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G63730.1); similar to OJ990528_30.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE02043.2); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.136327928961281 1.34282838980525 0.207423858418420 1 0.887300188300967 3.99495766316458 0.136327928961281 0.103016352209814 AT5G26020_at 2.7644588940813 3.57217215924923 3.70140447314439 4.13064929335246 3.1990292304039 3.11930788928864 3.04254908736526 2.80841445394015 3.18159984860311 2.59488599971004 3.46872602006332 2.72323241008515 3.24045938366778 3.41205432681949 2.68543624637923 3.72464238022258 2.83411544275498 2.95356623489148 3.18859220371063 0.294466091355584 0.314161280976181 0.294466091355584 0.339110355223868 0.294466091355584 0.306668560329084 0.312117305488234 0.294466091355584 0.314085155594095 0.331109576703573 0.297484947093449 0.294466091355584 0.308694210110501 0.294466091355584 0.301711037894396 0.314647797883862 0.295632720106157 0.306200719518251 0.31497759646498 5 0|5 /|- 9093895 9094241 9094120.333 9093598 9094880 - gene protein_coding_gene TRUE TRUE AT5G26020.1 similar to Glutamic acid-rich protein precursor (GB:P13816) -0.172212898480712 -1.34231243122702 0.207585562792591 1 0.886705029424062 6.35156738824571 -0.172212898480712 0.163975695780904 AT5G16840_at 8.968269311298 9.0689557337054 9.62256572342583 9.61727983034644 9.62197490991313 9.66437317383708 9.06184629704059 9.17451047349523 8.52592065177626 8.63503070821701 9.22952731999939 9.24907034796705 9.53810136539804 9.38536135487185 9.07370749029628 9.32549528424677 9.24026611966312 9.23119777979556 8.48859969077 0.114295096264396 0.110774184089336 0.116134385962052 0.113332802115492 0.114374008781930 0.116231477191253 0.112060463496796 0.109657975299488 0.116030387605377 0.111337620111336 0.113871412710284 0.112342005752769 0.111364163081468 0.118833818420953 0.110568034885335 0.113829295585115 0.114461489286255 0.111552757958806 0.114430477789438 5 0|5 /|+ 5537343 5537991 5537778.222 5535872 5538253 + gene protein_coding_gene TRUE TRUE AT5G16840.1|AT5G16840.2|AT5G16840.3 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT4G17720.1); similar to Os06g0112400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056594.1); similar to putative RNA recognition motif (RRM)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67779.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.108618081711532 -1.33962204185166 0.208430444683877 1 0.883604203171341 18.2669425481498 -0.108618081711532 0.0271737295716719 AT5G28590_at 1.18476708177871 1.55186701549673 1.83276060232755 1.48347947698338 1.27328413921220 1.67102114730297 1.28633595984941 1.48901438184964 1.55463204541351 1.28279271828649 1.58244472000257 1.54782935800791 1.57776995296639 1.67292847868312 1.36611592584955 1.58582974937487 1.59043800235632 1.73031292367271 1.00853848966729 0.212710911936626 0.220351147932756 0.209413556691809 0.219062598518922 0.208777275170274 0.214285793376382 0.214517908782159 0.212773140184481 0.208981407124583 0.215777597764184 0.216921554803995 0.207357837029031 0.210491313728555 0.206718535067676 0.214860396227053 0.206718535067676 0.210249846097712 0.206718535067676 0.211602092992496 5 0|5 /|- 10579485 10580363 10579872.5 10579450 10581563 - gene protein_coding_gene TRUE TRUE AT5G28590.1 DNA-binding protein-related similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT3G04590.2); similar to SAP1 protein [Antirrhinum majus] (GB:CAA10643.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175) 0.143390272832042 1.33956964260913 0.208446928305967 1 0.88354385245213 2.90341442059338 0.143390272832042 0.116864179160175 AT5G66690_at 3.16481178877873 2.86711665176417 3.77948412407374 3.84496869701907 2.81944835470151 3.05608645375297 2.49463963910514 2.48416487519564 2.74983748703319 2.46563171210004 2.62611195587417 2.22283136870674 2.59455769028741 2.18852684407253 2.64893321945833 2.66284046347155 2.81128295692917 2.82940661455563 2.80121440025966 0.215344761299796 0.208997652146345 0.223474518331933 0.222683210054669 0.212719274682735 0.216405602013283 0.215667388914389 0.208997652146345 0.229068441206144 0.208997652146345 0.213120727181486 0.208997652146345 0.210495053309510 0.209738780907485 0.214419437216193 0.211138014982776 0.210498273333007 0.215985057732649 0.212263561673165 5 5 + 26643227 26643800 26643436.091 26642306 26644019 + gene protein_coding_gene TRUE TRUE AT5G66690.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein UGT72E2 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl aldehydes as well as sinapyl- and coniferyl alcohol. The enzyme is thought to be involved in lignin metabolism. A knockdown mutant line (72E2KD) was obtained using RNAi silencing. A twofold reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype. In comparison, both knockout and knockdown lines of UGT72E1 and UGT72E3, respectively, failed to display the same reduction in phenylpropanoid 4-O-glucosides. similar to UGT72E1 (UDP-glucosyl transferase 72E1), UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G50740.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G26310.1); similar to Anthocyanidin 3-O-glucosyltransferase (Flavonol 3-O-glucosyltransferase 5) (UDP-glucose flavonoid 3-O-glucosyltransferase 5) (GB:Q40287); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.119624097225814 -1.33893561199598 0.208646465891634 1 0.882813737454056 5.68648470086574 -0.119624097225814 0.066804016976324 AT5G52130_at 1.49475885375909 1.4006954385998 1.50681428345467 1.44286888617202 1.77862205266909 1.87677099617411 1.26147734074124 1.52690700411500 1.79018147747661 2.00472024130399 1.53667947961563 1.46901203189571 1.56086183176532 1.99046592631855 1.02170962026104 1.68085804508247 1.69737244611985 1.90265393224250 1.69828340530199 0.191388419045078 0.193082859086971 0.192114030396325 0.195203223373466 0.195135398230907 0.192760558010039 0.200605741847122 0.192235126772767 0.204748763194364 0.194503226803761 0.198294755075411 0.191388419045078 0.198740518478771 0.196131791401731 0.202479680665477 0.194877850961249 0.19935681685279 0.197246339848710 0.193810629639086 5 5|0 -|/ 21199797 21201039 21200157.875 21199694 21201101 - gene protein_coding_gene TRUE TRUE AT5G52130.1 unknown protein -0.114732145850942 -1.33842991314648 0.208805729516351 1 0.88223157246183 3.25537104305571 -0.114732145850942 0.0527811224335252 AT5G19410_at 0.854566069627517 0.858775236197607 1.01745696513208 0.781396447621007 0.642052159814272 0.788105922876614 0.649416804504278 0.768584838651191 1.10581914050747 1.06230892049304 0.956932398446764 1.14744670261098 1.24598522542231 0.857737298032688 1.45978336913004 1.00756343213318 1.17017664705243 1.25082753834318 1.60759473341173 0.208961731112367 0.214077975433918 0.214095314079350 0.213007183843574 0.210497747219820 0.210638928181629 0.212137792056476 0.217078923189851 0.217361069842076 0.227739365389795 0.210862559601215 0.215786527260833 0.215528112598385 0.221887831954272 0.221199790351996 0.212704762767507 0.214378067332794 0.217186685370428 0.223342035901324 5 5 - 6545242 6545791 6545498.455 6545239 6547113 - gene protein_coding_gene TRUE TRUE AT5G19410.1 ABC transporter family protein Identical to Probable white-brown complex homolog protein 24 (WBC24) [Arabidopsis Thaliana] (GB:Q3E9B8); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G52860.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE80962.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.114278004421761 -1.33493092303382 0.209910460580932 1 0.878207646274851 1.99285972615333 -0.114278004421761 0.0522828490589311 AT5G64080_at 1.85837820859809 2.21150510275749 1.43668046748429 2.01972537573479 1.29959026460011 1.53775303337478 2.38277047867260 2.65268663458116 1.27474360189307 2.23854060729561 2.65062381568682 2.9357658457047 2.13578377745539 2.63118928834002 3.27031293185232 2.16679096270606 2.57681682431005 2.42312411245618 2.00144199574259 0.238717352232087 0.233806024280873 0.249777175391448 0.246092822810656 0.238549341160773 0.240021844931015 0.237810401094405 0.238960562384088 0.238688564775904 0.244034020506588 0.243822467614687 0.237780526010851 0.242866561459129 0.233806024280873 0.243250664493290 0.240860224870077 0.233806024280873 0.237037482897108 0.248521087551680 5 5|0 -|/ 25662715 25663719 25663209.7 25662489 25663961 - gene protein_coding_gene TRUE TRUE AT5G64080.1|AT5G64080.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Identical to Nonspecific lipid-transfer protein-like protein At5g64080 precursor [Arabidopsis Thaliana] (GB:Q8VYI9;GB:Q8L8Q1;GB:Q9FMI9); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT2G13820.1); similar to xylogen protein 1 [Zinnia elegans] (GB:BAD24657.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.152317332565564 -1.33475949250729 0.20996471047797 1 0.878010683097302 4.14340770228760 -0.152317332565564 0.133399915147510 AT5G18340_at 1.71001857612284 2.08839781251377 2.76501998194147 2.39141406264625 2.97420894530973 3.10059736261785 2.60161553652726 2.29264031663964 2.16296604807608 2.63505763613372 2.43474121532454 2.33158650274670 2.85430575282277 2.70672441528816 2.45935226966119 2.95415197659405 3.01961925212150 2.90190262640946 2.65873889248883 0.207467197659137 0.197644596889079 0.1953346711619 0.218132295781851 0.199711820253968 0.196791251458956 0.197404824864182 0.205548854057147 0.204149210421379 0.204276152488522 0.197759104173385 0.202818293848389 0.200198498819834 0.206615090304879 0.199849717384127 0.19859712097025 0.202701823445809 0.203583427491353 0.19869511825666 5 5 - 6070805 6071149 6070978.1 6070642 6072200 - gene protein_coding_gene TRUE TRUE AT5G18340.1 U-box domain-containing protein similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G18320.1); similar to U box [Medicago truncatula] (GB:ABE90370.1); contains InterPro domain U box; (InterPro:IPR003613) 0.138408184443240 1.33443908909205 0.210066134641517 1 0.877642605881087 5.08718183775848 0.138408184443240 0.108651864269919 AT5G41380_at 0.91705767172198 1.04391921033608 1.04167476858625 1.28072859286664 0.73647794681342 1.28723436727230 1.05550306628754 0.888216752795802 1.02936107600358 0.977948512202734 1.00871396915832 0.8406542575982 0.585740485670467 0.529851277544906 0.821956013631256 0.550505377559331 1.07148956621667 0.673268180637271 1.05608382246779 0.220979619744033 0.220979619744033 0.236303983549342 0.224359784651265 0.228494664329217 0.231928533143386 0.225197006874234 0.220979619744033 0.220979619744033 0.220979619744033 0.223969243597915 0.220979619744033 0.228465136982941 0.220979619744033 0.224752373361165 0.223560402019486 0.233789286523045 0.236138246005160 0.226995799253659 5 5 - 16579853 16580366 16580214 16578506 16580960 - gene protein_coding_gene TRUE TRUE AT5G41380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63820.1); similar to CCT [Medicago truncatula] (GB:ABD32315.1); similar to Os01g0835700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044727.1); contains InterPro domain CCT; (InterPro:IPR010402) -0.139060082541491 -1.33347048409666 0.210372995086989 1 0.876530249251437 1.92205331103171 -0.139060082541491 0.110071190880737 AT5G10460_at 6.81218376356767 7.5043050057377 7.57112523643758 7.76756869890402 8.28924286496363 8.01489681559167 7.71707467209673 7.51040106790206 6.96981289982693 7.36665730840896 8.32596818224552 8.60535153461208 8.09646864959353 8.43561619547965 8.48852541313839 8.52503941537313 7.95973620799779 8.27110298621852 7.45446659598208 0.190071729564660 0.182945803741617 0.181560593283863 0.188733309739758 0.190141947834155 0.187748725570102 0.180394963217386 0.19334232105778 0.205646736471319 0.192147657548779 0.191772043896219 0.190448684575528 0.192328075301720 0.18595689675995 0.186690929171783 0.182968954607617 0.204529092738017 0.191349238670717 0.186325664161686 5 0|5 /|+ 3289184 3289799 3289500.333 3287782 3289949 + gene protein_coding_gene TRUE TRUE AT5G10460.1 haloacid dehalogenase-like hydrolase family protein similar to Haloacid dehalogenase-like hydrolase [Medicago truncatula] (GB:ABE83901.1); contains InterPro domain HAD-superfamily subfamily IIA hydrolase, hypothetical 3; (InterPro:IPR006356); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) -0.154580416322893 -1.33086038782342 0.21120174141631 1 0.873535557452526 15.4494106028943 -0.154580416322893 0.137967181567005 AT5G25410_at 2.51927828394831 2.63008864996577 3.01755027890938 3.43675708416152 2.08085406429262 2.92080702307657 2.29114813268982 2.41946710189861 2.53246792266833 2.53245773397817 2.34492097859824 2.39609519517594 2.25469646342356 2.89381124968694 2.34335936737845 2.42544530441063 2.71838018088039 2.73804803795724 2.84004964255258 0.189584718721327 0.183138813500425 0.183138813500425 0.205489126790847 0.183811748229174 0.192333646708926 0.183138813500425 0.184603652996318 0.187742867076667 0.187433626396861 0.184346134336443 0.188903844071958 0.193036553308674 0.188449351611212 0.191220248276781 0.183138813500425 0.189729075933683 0.189637428113894 0.183138813500425 5 5|0 +|/ 8832685 8833411 8833097.6 8831673 8833512 + gene protein_coding_gene TRUE TRUE AT5G25410.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60380.1); similar to hypothetical protein 25.t00048 [Brassica oleracea] (GB:ABD64955.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.171409550647191 -1.33049197033488 0.211318937335839 1 0.873113179890491 5.23916200916213 -0.171409550647191 0.165083629032130 AT5G28310_at 1.87067946572179 2.08526216831244 1.82827572079232 1.87387821582958 2.07954068051398 1.54642454767508 1.81000560316223 1.90897137120812 1.75899059165280 2.16751473210535 1.75931453490481 2.43563643107065 2.06527166923751 2.19208168289314 1.74671869799262 2.207510692309 1.99863664081167 2.30008227091901 1.91958701409347 0.18960099114246 0.192786819277738 0.196153587674147 0.192628930685333 0.197039683769358 0.192868090519354 0.18960099114246 0.193642334744863 0.196467779200151 0.19496162460975 0.197820521314267 0.192774240104449 0.193125841885458 0.199587983032357 0.189602707008018 0.192681530888078 0.196493580205510 0.213733004954162 0.199699036292468 5 5|0 -|/ 10300331 10301720 10300960.571 10300121 10301848 - gene protein_coding_gene TRUE TRUE AT5G28310.1 oxidoreductase-related similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT2G45630.2); similar to OSJNBb0085F13.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE02764.1); similar to Os04g0107200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052015.1); similar to B0616E02-H0507E05.10 [Oryza sativa (indica cultivar-group)] (GB:CAH67834.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140) -0.134091732886479 -1.32976295039853 0.211551001959971 1 0.872277622310952 3.89380673338586 -0.134091732886479 0.101223274747605 AT5G49350_at 1.75004890594969 1.42129886513338 1.88576942871366 1.49929765804168 1.06073564093395 1.57915438292102 1.54811651745158 1.63064585295050 1.90798510167062 1.89418911020348 1.66345155028448 2.12109510548888 1.90498551688183 2.34397366402724 1.62705026734417 1.82145650290567 1.70550970691311 1.85579272915808 1.71764965593278 0.184689459818835 0.183269648677524 0.193994697126272 0.191841569887783 0.180804418390416 0.185960371364223 0.188021205006959 0.183660767612265 0.203238294168158 0.190767973371907 0.180804418390416 0.186656835400804 0.198839736708005 0.186945862402418 0.190658053035004 0.185338793089236 0.183331552115434 0.187322827212447 0.186779720808577 5 5 - 20027061 20027807 20027407.6 20026967 20028325 - gene protein_coding_gene TRUE TRUE AT5G49350.1 similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G46730.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01985.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001053793.1); contains domain COLLAGEN ALPHA CHAIN (PTHR10499) -0.147434231983597 -1.32778085078978 0.212183019437289 1 0.870007461374688 3.40706124133413 -0.147434231983597 0.126342480303526 AT5G16500_at 1.16452373035957 1.12583094080227 1.17425405174344 0.874401594155559 1.06681297388701 1.08742627146675 1.36149472025816 1.05575802930720 1.22433863922356 0.890042809412684 1.08212369204019 0.871946713949171 1.17939412808582 1.01032231852738 0.91506527180511 1.18495255292756 1.27373535528836 1.50370690298412 1.18276555462642 0.217801264826257 0.208905211412217 0.204621800568293 0.211033083678090 0.207092132745217 0.213367938028785 0.205087851727984 0.204621800568293 0.213538454760972 0.207531689493249 0.208891749618262 0.205788911503896 0.215570253057955 0.211281567107179 0.208141388438604 0.207396874367023 0.221964636270718 0.205028291189048 0.219075201504198 5 5 - 5386738 5387243 5386984.455 5386678 5389168 - gene protein_coding_gene TRUE TRUE AT5G16500.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G02810.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90364.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.121566940716963 -1.32695869959864 0.212445631048535 1 0.869066512522602 2.22716522301676 -0.121566940716963 0.0744956531158743 AT5G60040_at 2.34785831287308 2.44956523076468 3.03980241587911 3.0484067372554 2.47119740215051 2.94572970354302 2.67214670834666 2.315417950801 2.18153403636936 2.25619870329778 2.32238698887284 2.50994867956671 2.29089896469846 2.36617214080399 2.70726748557418 2.75455497294946 2.87232690596801 2.62921199889563 2.02482426619317 0.181623696286246 0.183824764338336 0.181106523991980 0.178918656373467 0.175986264581052 0.19079858905909 0.179125848091741 0.183168869160593 0.183931218436758 0.184018482732483 0.177497783491423 0.178006284739802 0.176557944189932 0.178292011793365 0.180313144204686 0.176787437808143 0.181330126543401 0.176028499007982 0.186157565755066 5 5|0 +|/ 24199104 24200471 24199984 24190629 24200867 + gene protein_coding_gene TRUE TRUE AT5G60040.1 NRPC1 (nuclear RNA polymerase C 1); DNA binding / DNA-directed RNA polymerase Encodes a subunit of RNA polymerase III (aka RNA polymerase C). similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT), DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT4G35800.1); similar to hypothetical protein CC1G_11381 [Coprinopsis cinerea okayama7#130] (GB:EAU80581.1); similar to RNA polymerase I, large subunit (ISS) [Ostreococcus tauri] (GB:CAL52497.1); similar to PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa isoform 2 [Bos taurus] (GB:XP_873057.1); contains InterPro domain RNA polymerase, alpha subunit; (InterPro:IPR000722); contains InterPro domain RNA polymerase Rpb1, domain 1; (InterPro:IPR007080); contains InterPro domain RNA polymerase Rpb1, domain 5; (InterPro:IPR007081); contains InterPro domain RNA polymerase Rpb1, domain 3; (InterPro:IPR007066); contains InterPro domain RNA polymerase Rpb1, domain 4; (InterPro:IPR007083); contains InterPro domain RNA polymerase I subunit A, N-terminal; (InterPro:IPR006592) 0.135274078962349 1.32627530204421 0.212664126666938 1 0.86828467342902 5.01665640059481 0.135274078962349 0.10424365981308 AT5G52220_at 1.37267807049908 1.44805786035481 1.58100937122728 1.65281060756284 0.877645359285523 1.53718369646126 1.05780368702565 1.07254992309502 1.24817929273327 1.52432076284266 1.47640168215491 2.1961080426929 1.33458055433351 2.032148588611 1.94535564491958 1.16370607702695 1.54071749502255 1.51375022337470 1.27726177438917 0.195426990582304 0.197030684261424 0.197828579017147 0.195571279247902 0.194980939008463 0.196068236195926 0.196038314083493 0.203489410099964 0.208589826166124 0.201831426004962 0.198339897482896 0.201597246018693 0.200061718692125 0.198116131165247 0.195468345444315 0.200374457993177 0.195437971153861 0.207002954791046 0.197865054668502 5 5|0 -|/ 21224460 21224844 21224688.4 21224456 21224904 - gene protein_coding_gene TRUE TRUE AT5G52220.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33182.1) 0.141235497572249 1.32599829510757 0.212752744177418 1 0.867967843761435 2.82510064619162 0.141235497572249 0.115577430522323 AT5G17830_at 0.948979061601591 0.459503664234355 0.933743942411923 0.772469925182134 1.20704664638801 1.19540164352635 0.952975005177694 0.96981710992603 1.21954445668124 0.591955502158676 0.935421934253254 0.751225154982649 1.04837114852006 0.889712934379712 0.810598258060885 0.87914176225279 1.29064024210861 1.05934353716063 0.514514553247823 0.185491770309085 0.188928546105173 0.185793054710280 0.186943779794467 0.183318282236298 0.183318282236298 0.188730453152274 0.183318282236298 0.188875692682207 0.187735984273333 0.188908562388466 0.190749052334219 0.187659851971877 0.191505699893572 0.190192016276357 0.185402756239126 0.190759202546377 0.188075207622401 0.19368905793264 5 5 + 5894688 5895270 5894914.091 5893384 5895369 + gene protein_coding_gene TRUE TRUE AT5G17830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04440.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03700.1); similar to Protein of unknown function DUF580 [Medicago truncatula] (GB:ABE92417.1); contains InterPro domain Protein of unknown function DUF580; (InterPro:IPR007603) 0.127877601133000 1.32555160053474 0.212895710961780 1 0.867457028498451 1.79668964588638 0.127877601133000 0.0892557401022417 AT5G38670_at 0.9995542387693 1.03138202950658 1.10003111516915 1.00185776745858 0.728661391717714 1.22205221330955 0.751928911869629 0.69750757886906 0.662736730341688 0.696331788570407 1.03037877137261 1.39077574596444 0.575862779305586 1.00249143871382 1.35620796199417 0.851170067175218 0.861755133890123 1.10631816336038 1.00153824645135 0.16969579975078 0.172982744427283 0.170602458854761 0.16753170222762 0.167356230180873 0.165258975649918 0.168452651582360 0.171938285632106 0.169724306936112 0.167444651668598 0.163548567449916 0.168638867407802 0.170053526228476 0.167122738808610 0.168291168512094 0.16681854394805 0.163548567449916 0.167028106965928 0.172838442218898 5 5 + 15493524 15493944 15493739 15493016 15494101 + gene protein_coding_gene TRUE TRUE AT5G38670.1 F-box family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G49000.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 0.127171846851321 1.32548556257012 0.212916853478611 1 0.867381521232463 1.84599137058862 0.127171846851321 0.0877384071457858 AT5G55530_at 8.5910065465284 9.14815434067522 8.95226635268182 9.0102496691814 9.8793971585638 9.75746559592205 8.11620966368191 8.53091849350801 7.30715672877665 7.34189082305689 8.38697857496999 8.78209917507924 8.20244096418333 8.66493149905675 8.35227658149822 8.23282295355227 7.50673983238593 8.49772316835728 6.71495774632649 0.176034836403139 0.173092165828726 0.177734580152988 0.179126923700504 0.175548567971445 0.175320982552080 0.180210260649289 0.174867176231344 0.191434471974733 0.199215105949497 0.173611909413800 0.174841676569483 0.175482619387189 0.174668799536316 0.173037300773277 0.173037300773277 0.213394906914705 0.173394131411421 0.185477265042235 5 5 + 22512318 22512856 22512590.818 22510166 22513182 + gene protein_coding_gene TRUE TRUE AT5G55530.1|AT5G55530.2|AT5G55530.3 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G50570.2); similar to C2 [Medicago truncatula] (GB:ABE81465.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.144942180746645 1.32518697551657 0.213012469900369 1 0.867040151751585 16.7230018241039 0.144942180746645 0.122444759693293 AT5G01660_at 2.36617682886800 2.65436544791081 3.03157649909559 2.76485116063742 2.87469721432193 2.97681324056713 3.08436841803870 2.27847295629499 2.94873634006174 3.03266068739347 3.18155926195861 3.4499528682501 2.95101618229349 3.12082664143034 3.19938364511531 3.03138563045877 3.79788865367995 3.41590578808471 3.23607641970894 0.180890868302534 0.175552199994313 0.175775477747875 0.187450118398915 0.177450119963055 0.187071575037835 0.177637469778475 0.17881820580163 0.182954730729756 0.174899921643514 0.189187757151210 0.180571422837833 0.186200257004033 0.180823202374311 0.179973096225989 0.174899921643514 0.185162312496472 0.177180336788176 0.184967215775170 5 5|0 -|/ 244501 245651 245040.5 244501 248142 - gene protein_coding_gene TRUE TRUE AT5G01660.1 kelch repeat-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11000.1); similar to Kelch-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC65044.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.165038845433797 -1.32512123160514 0.213033527820254 1 0.866964995011514 5.92440571219864 -0.165038845433797 0.156141946309424 AT5G48460_at 5.35525660295037 5.79877485141638 5.70500164239128 6.08424562162744 7.19148370535978 6.80508558334983 6.16626952898993 6.54907588649552 7.17253810346824 6.71026124171297 9.6655904948622 9.33874806421647 8.88554096793423 9.4129716905874 8.99794702168736 8.99671198630782 7.88613018217965 9.0474281319278 7.58589726600883 0.217628010704552 0.215142845604395 0.220345552479954 0.213264118616901 0.219948949466813 0.21400160005196 0.213472105367107 0.214340304594153 0.231179780632635 0.218839887674076 0.218059443567516 0.223994349640972 0.218760048664096 0.217282008754255 0.217910064657461 0.214708915199659 0.224236919419503 0.216347941708927 0.223458528470491 5 5 - 19653459 19654329 19653746.636 19653327 19656714 - gene protein_coding_gene TRUE TRUE AT5G48460.1 fimbrin-like protein, putative similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G35700.1); similar to ATFIM1 (Arabidopsis thaliana fimbrin 1), actin binding [Arabidopsis thaliana] (TAIR:AT4G26700.2); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G55400.1); similar to Os01g0514600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043189.1); similar to Os02g0719100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047943.1); similar to fimbrin/plastin-like [Triticum aestivum] (GB:AAC49813.1); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 0.153832443370122 1.32398909080123 0.213396425267508 1 0.865671165986538 14.299457063419 0.153832443370122 0.138051493056698 AT5G02000_at 2.89226685531258 2.61897465578785 3.1514841466252 2.71517888692861 2.41538337351419 3.1257730178916 2.47892084204212 2.57724417964947 2.55743419875568 2.68312804902828 2.69973326014798 2.98553736778819 2.75824169255348 2.76336385140962 2.58860496960325 2.86461960675844 3.32327521288562 2.89467850812117 2.82164447114012 0.237741183184147 0.244079206058960 0.237726758363834 0.245206508524340 0.244899597046347 0.243035628024407 0.241368598629157 0.251196714771137 0.24966025473095 0.239173338489473 0.241455962741946 0.234995066574567 0.248523437820046 0.241249401235782 0.239012183439521 0.236914649906230 0.255187329968391 0.245813880411609 0.239133764240294 5 5 - 380177 380541 380350.455 380152 380592 - gene protein_coding_gene TRUE TRUE AT5G02000.1 unknown protein -0.162562519952259 -1.32209682612154 0.214004114780591 1 0.863510365797373 5.52048276886886 -0.162562519952259 0.152776184867325 AT5G60210_at 4.19420717665005 4.48718101329061 3.9970934782358 4.54094153267511 5.59619854097264 5.4163940495376 4.24477015603527 3.70012502304216 4.26982655720883 4.42740379581153 5.2001866195972 6.44306989851275 5.9517794451996 5.4992226582076 5.7627962664082 5.86565390137377 5.25105625111725 5.87780886468442 4.36782770822098 0.209163721632771 0.209163721632771 0.224775479695726 0.216707445307353 0.210324468351024 0.244044720513249 0.220131371104361 0.216971947623236 0.235284297150961 0.212240337023695 0.221849674667584 0.209163721632771 0.212112388360159 0.211282470701617 0.210400074518642 0.209163721632771 0.217543672381313 0.216289377373794 0.221430883230828 5 5 - 24260587 24261138 24260915.222 24260309 24262858 - gene protein_coding_gene TRUE TRUE AT5G60210.1 cytoplasmic linker protein-related similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G37080.1); similar to Putative myosin heavy chain-like protein, related [Medicago truncatula] (GB:ABE85909.1) 0.158272365022403 1.32170296058620 0.214130782052688 1 0.86306087534789 9.56534691724726 0.158272365022403 0.145877213993713 AT5G39900_at 2.25549601157351 2.80025718543432 2.82844422185124 3.23987418893001 3.49482059428903 3.22113223269847 2.60920427778321 2.75790860933232 2.88909352614530 2.28083264108626 3.08158923903276 3.07205697400903 3.61246039813055 2.95454646485580 3.09906695167913 3.2773994405058 3.19707522984455 3.04955906173399 2.79882399664533 0.176825765729596 0.182574596617253 0.188771673535925 0.177462872907996 0.178326974480462 0.178811331226854 0.176132372963329 0.186011854730386 0.190900326156863 0.188983427678584 0.185562210976799 0.180888906010264 0.180027188485962 0.181877288434511 0.179835947768538 0.178806569862276 0.182706976368020 0.176680113207763 0.176629838999975 5 5 - 15993981 15994522 15994327.727 15993775 15996229 - gene protein_coding_gene TRUE TRUE AT5G39900.1 GTP binding / translation elongation factor similar to GTP-binding protein LepA, putative [Arabidopsis thaliana] (TAIR:AT5G08650.1); similar to PREDICTED: similar to CG32527-PB, isoform B isoform 1 [Danio rerio] (GB:XP_682683.1); similar to PREDICTED: similar to CG32527-PB, isoform B isoform 5 [Danio rerio] (GB:XP_706635.1); similar to PREDICTED: similar to GUF1 GTPase homolog (S. cerevisiae) [Strongylocentrotus purpuratus] (GB:XP_791097.2); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Elongation factor G, III and V; (InterPro:IPR009022); contains InterPro domain Translation factor; (InterPro:IPR009000); contains InterPro domain Elongation factor Tu, domain 2; (InterPro:IPR004161); contains InterPro domain Elongation factor G, C-terminal; (InterPro:IPR000640); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain GTP-binding protein LepA; (InterPro:IPR006297); contains InterPro domain Protein synthesis factor, GTP-binding; (InterPro:IPR000795) 0.148592086417448 1.32011808500914 0.214641104956831 1 0.861253110020586 5.8130018025363 0.148592086417448 0.129855318089326 AT5G27020_at 2.43074877892652 2.09363285365226 2.13138529233217 2.39284772955530 1.80881667767569 2.0456890620926 1.82008292328274 2.17209619895772 1.92502519654882 1.68435169351631 2.17593408566968 1.48223157877038 2.21575497711156 2.15588035876698 2.18502284018139 1.83179370802426 2.21413629213781 1.74313970474503 2.05517339324355 0.187142199258559 0.190959217537931 0.190409827124875 0.185733767779799 0.193345751173976 0.189315591949966 0.187831250951939 0.187705167379943 0.185852939785669 0.207250965012329 0.185319263652742 0.184110404972474 0.190368453185315 0.189972907178688 0.190458145126903 0.190008186539025 0.194167447007856 0.184328732791748 0.184682935451996 5 5 + 9508211 9508653 9508437.545 9508101 9508881 + gene protein_coding_gene TRUE TRUE AT5G27020.1 unknown protein -0.134457191378167 -1.31885701405583 0.215047881668239 1 0.859815763681801 4.05624750003210 -0.134457191378167 0.104125371371439 AT5G19640_at 2.42823482029173 1.92666554684667 2.60500958453252 1.88407798640889 1.73648260799326 2.11241455454878 2.2014320632253 2.06055422633387 2.16322404957772 2.35565669717701 2.23676458217177 2.04836136558466 2.18100063236201 2.03737384482781 2.21241831433671 2.29311014423883 2.33546999591746 1.98633061474299 1.65965355441961 0.174441400294815 0.172776376230731 0.179158932908467 0.172260989130507 0.180523113975190 0.170477106166599 0.181766988780538 0.171096061235224 0.182520955349731 0.175380692756941 0.180364057011433 0.170477106166599 0.170477106166599 0.170805516438922 0.178740604642520 0.170889315630869 0.179687308056504 0.173846076046915 0.181569382401478 5 5 + 6637993 6638533 6638239.273 6636462 6638592 + gene protein_coding_gene TRUE TRUE AT5G19640.1 proton-dependent oligopeptide transport (POT) family protein similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G32450.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE93353.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABD32535.1); similar to TGF-beta receptor, type I/II extracellular re (GB:ABE93051.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) -0.171152662584971 -1.31842560306625 0.215187185610283 1 0.859324268166476 4.23229148402141 -0.171152662584971 0.167110735756603 AT5G46295_at 3.31700909016339 3.09705801719597 3.66081257515397 3.43142148851974 3.28924478017367 3.61665441699366 2.50085733479621 3.18503399225605 3.06065290932777 3.10700991981663 2.81923239785874 3.32187770083394 3.53348611700559 3.1635047095846 3.20274060774458 3.05578746838876 3.38821646666988 3.5647148325755 2.96963142227333 0.171375662484413 0.183701261169796 0.188527100247783 0.186025158380897 0.176058090433558 0.189782671139589 0.179306767981153 0.171375662484413 0.180268678452084 0.179759202513834 0.172654492351726 0.173052765612748 0.178277358399529 0.174344968575744 0.176353548539230 0.174733115132205 0.171375662484413 0.172955241229202 0.177514768355610 5 5 - 18797157 18797317 18797229.091 18797023 18797432 - gene protein_coding_gene TRUE TRUE AT5G46295.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06475.1); similar to hypothetical protein MtrDRAFT_AC157648g13v1 [Medicago truncatula] (GB:ABE86474.1) -0.155654943829687 -1.31780004184390 0.215389313613993 1 0.85861178077661 6.41324135593422 -0.155654943829687 0.142315079313985 AT5G21120_at 0.755993973630288 0.63835115806063 1.12125193957659 1.24952406916721 0.977302375121547 0.620264740831688 1.13561956590076 0.639889568730549 0.931590366905686 1.43416743121123 0.945953281403284 1.26013612975782 1.42984187599707 1.04749366436819 1.30080490624473 1.22851919888376 1.20221605149441 1.26700751741239 0.645281017876528 0.203411973002880 0.208189441924050 0.205334910330715 0.211325217489078 0.202967745778167 0.205990028983341 0.207307652784361 0.21085088338484 0.208430751368365 0.202967745778167 0.216426189155960 0.215872290064445 0.202967745778167 0.206991358252287 0.21034564640906 0.205078072662774 0.213371381242732 0.207669230424544 0.210251331348301 5 5 + 7183607 7184162 7183876 7182624 7184345 + gene protein_coding_gene TRUE TRUE AT5G21120.1 EIL2 (ETHYLENE-INSENSITIVE3-LIKE 2); transcription factor ethylene-insensitive3-like2 (EIL2) Identical to ETHYLENE-INSENSITIVE3-like 2 protein (EIL2) [Arabidopsis Thaliana] (GB:O23115); similar to EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G27050.1); similar to transcription factor EIL1 [Vigna radiata] (GB:AAL76272.1); contains InterPro domain Ethylene insensitive 3; (InterPro:IPR006957) 0.137189065959531 1.31624189372461 0.21589345561198 1 0.856838139254043 1.99923776564059 0.137189065959531 0.109929585029928 AT5G62600_at 6.57813866132764 6.83639421923796 7.24217665288255 7.36485729923347 7.59125491149401 7.07670408709191 5.90812468535359 6.32139686170026 6.72120360777334 6.55385341858936 7.68258656220378 8.04808541795653 7.44121601146762 7.73325825373507 7.45125946364938 7.79194780227811 7.4046335554748 7.06424179033962 6.85507794444243 0.207451549462911 0.203701756099643 0.208724619431405 0.204926531460076 0.198237037247002 0.206309911776398 0.211089044939343 0.198237037247002 0.237051544615953 0.209335404798281 0.205497186268486 0.202181667719503 0.198237037247002 0.213744537906643 0.203641636890791 0.201882247139524 0.217262853161773 0.203775812739003 0.20510377180876 5 5|0 -|/ 25140567 25141297 25140976.2 25140277 25149902 - gene protein_coding_gene TRUE TRUE AT5G62600.1 transportin-SR-related similar to importin-related [Arabidopsis thaliana] (TAIR:AT1G12930.1); similar to Os10g0477800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064858.1); similar to Importin-beta N-terminal domain containing protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54280.2); similar to nuclear transportin [Triticum aestivum] (GB:AAY84877.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Exportin 1-like; (InterPro:IPR013598); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) -0.144879923380789 -1.31428702848123 0.216527333039307 1 0.854614979941503 14.0084802209934 -0.144879923380789 0.124467444113810 AT5G51870_at 1.54701794751105 1.70624013722997 2.00156099226122 2.08806997490187 1.74576450182054 2.00251833774107 1.89632338352150 1.97259766149761 1.9968582466833 2.20050488088703 2.2095892000013 1.75463400398767 1.82458532768966 1.68179617436159 2.26340023564294 2.03615569687696 2.53516255910494 2.23154368367605 2.22286833076228 0.197330612449208 0.193826083248185 0.195147335627594 0.194512862145436 0.201713944337474 0.194071653507867 0.196132727222891 0.198327532561495 0.19986911751596 0.205471778478541 0.199738776405956 0.194135004796269 0.200410707772487 0.193783996822212 0.195460181367885 0.192781919831072 0.200479145370981 0.200085103831523 0.192781919831072 5 5|0 -|/ 21102867 21105080 21104143.75 21102861 21105149 - gene protein_coding_gene TRUE TRUE AT5G51870.1|AT5G51870.2 AGL71; transcription factor similar to MADS-box protein (AGL72) [Arabidopsis thaliana] (TAIR:AT5G51860.2); similar to MADS-box transcription factor FBP22 [Petunia x hybrida] (GB:AAK21253.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.113611793098167 -1.313719900399 0.216711514925256 1 0.85397044747273 3.97360437353319 -0.113611793098167 0.0559627337508721 AT5G35010_at -0.0152787106287662 -0.400047731423016 -0.399418428446747 0.160061954591706 -0.0615847488491428 -0.792193401159658 -0.412949053868506 -0.306277947130025 -0.268116664225314 0.0710765106812012 -0.630177773091608 -0.305618190942195 -0.485661219468963 -0.38295855125459 -0.158511520213497 -0.152096793555372 -0.0663199908223148 -0.385050981219628 -0.0661004437141852 0.337144034941361 0.337144034941361 0.337144034941361 0.337144034941361 0.337144034941361 0.359374400542783 0.340466895866076 0.337144034941361 0.348466091747713 0.337144034941361 0.337144034941361 0.337862669071067 0.337144034941361 0.359508100889731 0.346254705999735 0.352747542484347 0.337144034941361 0.337144034941361 0.351410099050134 5 5 + 13294114 13294481 13294256.25 13293901 13294593 + gene protein_coding_gene TRUE TRUE AT5G35010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14774.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05564.1); similar to hypothetical protein 40.t00047 [Brassica oleracea] (GB:ABD65162.1) -0.174696150353215 -1.31357479567858 0.216758660236333 1 0.853805569300664 -0.482717463359496 -0.174696150353215 0.173593170389324 AT5G51910_at 2.29999495150551 2.72562824882323 2.03965186827898 2.45917178614642 2.52031545524288 2.77546944754531 1.87974012604775 2.41451332353687 2.82038021982008 2.4246161738391 2.77582511074448 2.8423537780671 2.50236092818476 2.61855103201429 2.69417616997897 2.63564904159819 3.10203021986454 2.92661368586631 2.60650979853848 0.221893713711494 0.211940254175863 0.213169195834239 0.211940254175863 0.213281352448774 0.211940254175863 0.215317511932093 0.218452030589512 0.214688415098057 0.214224571775121 0.211940254175863 0.213713728186663 0.226944833085949 0.220944267089136 0.215243934820011 0.212726111657611 0.224075429560658 0.216657803758548 0.218515753791375 5 5 - 21111935 21112444 21112175.545 21111773 21113074 - gene protein_coding_gene TRUE TRUE AT5G51910.1|AT5G51910.2 TCP family transcription factor, putative similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G45680.1); similar to Os08g0544800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062409.1); similar to PCF2 [Oryza sativa (japonica cultivar-group)] (GB:BAA23143.1); contains InterPro domain TCP transcription factor; (InterPro:IPR005333) -0.157106995985033 -1.31317738293417 0.216887825096098 1 0.853354066025211 5.07899251415206 -0.157106995985033 0.145638285113406 AT5G49830_at 7.04465929236807 7.23343745499644 7.74937973053839 7.76522939933889 7.6202407304691 7.65345080168328 6.62310176419247 6.91493290525003 6.771791257657 6.22281994307668 7.55617093097594 7.73966332192942 7.55014585395689 7.49977002575234 7.56424171944374 7.43802229883721 7.13025988746678 7.55773340779298 6.30462087576932 0.161906797890331 0.165294198667745 0.168971454736286 0.169823825443541 0.165935807998227 0.165521657563499 0.163075766638495 0.161837533812381 0.165848371283626 0.169790958165867 0.160476898275669 0.163443804588883 0.163135494907912 0.166517281441446 0.177547713510321 0.161086366141282 0.173564960397006 0.170360645305293 0.167412376537047 5 5|0 -|/ 20268043 20268999 20268463 20267712 20272265 - gene protein_coding_gene TRUE TRUE AT5G49830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10385.1); similar to expressed protein (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07222.1); similar to AT5g49830/K21G20_4 [Medicago truncatula] (GB:ABE86338.1); similar to Os07g0200000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059127.1); contains domain FAMILY NOT NAMED (PTHR21426); contains domain gb def: Gb|AAD32890.1 (AT5g49830/K21G20_4) (PTHR21426:SF3) -0.115040609562962 -1.31288594607796 0.216982586595742 1 0.853023023192526 14.2943431546565 -0.115040609562962 0.0604842093650428 AT5G05050_at 0.890052950582432 1.18088378492172 1.10451740800149 0.948957937126217 0.697701875303022 1.15180258427875 1.20459929635704 0.966465706180201 1.24694231777728 1.04835945006534 0.831712578354797 1.01711605655025 1.22018372717484 0.894232245666671 0.893211905559279 1.42695624081696 1.43816622180199 1.17879187234828 1.17260442761942 0.220449692417141 0.219975154266108 0.224735755883812 0.224819882551428 0.223251681524975 0.227601430307556 0.223629662226172 0.219383990400188 0.232074377986305 0.229171790464918 0.226669981390013 0.224631019962693 0.219383990400188 0.230957249365561 0.222623180754698 0.234642474656576 0.232366529899135 0.222340429287707 0.224555943194198 5 5|0 +|/ 1492301 1493404 1492813.875 1491640 1493458 + gene protein_coding_gene TRUE TRUE AT5G05050.1 peptidase C1A papain family protein contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) -0.134503729901250 -1.31242333550309 0.217133075795516 1 0.852497649509044 2.15238023677127 -0.134503729901250 0.105506077212022 AT5G11290_at 0.375758543090275 0.346127023464645 0.463278522717598 0.532120539524418 0.508239155290148 0.859552216251333 0.191306072396570 0.436301344947385 0.789949513513454 0.169640545438024 0.626287035281177 0.40671375425569 0.383174606881599 0.478237962284317 0.272807342280305 0.283435424905488 0.417005883248157 0.751910119013842 0.149673136624686 0.201408477676043 0.204119644606024 0.205016242764823 0.203047844542573 0.201320225226969 0.201785748645771 0.203194232238702 0.200621326915919 0.200736867933261 0.202492964353354 0.202842140679864 0.200392557191518 0.201102600340011 0.198237516550782 0.200701647136532 0.198237516550782 0.198237516550782 0.205716977389004 0.198237516550782 5 5 + 3599641 3600182 3599912.455 3599002 3600473 + gene protein_coding_gene TRUE TRUE AT5G11290.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31980.1); similar to Fgenesh protein 60 [Beta vulgaris] (GB:ABD83313.1); contains InterPro domain Protein of unknown function DUF247, plant; (InterPro:IPR004158) 0.120521679468725 1.31223235945681 0.21719522620667 1 0.852280801094538 0.875185884482401 0.120521679468725 0.0752461102086168 AT5G45120_at 2.54551124904380 2.24099340018164 2.23915099104033 2.75187147315596 2.58620245523241 2.67318813815006 2.26928436964226 2.36674480937724 3.15301898751968 2.84352160843502 2.82551541833322 2.91529058790670 3.22911076905174 3.07390297788049 3.25314848416822 3.05427285390174 3.08836284093842 3.16197176582400 2.61780477324773 0.208706797917874 0.207164919811575 0.210216436260063 0.222412057525104 0.205490529691176 0.208776536825719 0.207340961541251 0.210771738360801 0.20754488369986 0.205908856275655 0.214619278907696 0.207935612284407 0.206057507202805 0.213027286412618 0.208473598710529 0.206575352224964 0.206199341729959 0.206732529567416 0.204825110061755 5 5 + 18259122 18259673 18259414.455 18258230 18259705 + gene protein_coding_gene TRUE TRUE AT5G45120.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT4G16563.1); similar to Peptidase aspartic, active site [Medicago truncatula] (GB:ABE80893.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.134351425219502 -1.31024389350781 0.217843215404249 1 0.850024257167628 5.43244107005365 -0.134351425219502 0.105645366418258 AT5G61010_at 8.32584132965446 8.74518076342668 9.7260103897475 9.6878724586214 9.02373064037346 8.64176094466597 7.79278316979525 8.29341555573413 7.10372733651601 6.72733970249215 8.21248643482941 7.78969967868946 8.03637521258914 8.17849450349197 6.99735723637567 8.5314523726859 7.59789229350826 7.89437182991108 6.49194315416916 0.215001205002794 0.209244312100639 0.213100498743877 0.21189508418748 0.211659280248979 0.219183507367126 0.208288081539253 0.209090036932502 0.246051998409433 0.222877021390137 0.208745450005635 0.205881347644734 0.215519845399704 0.216628102821907 0.229576851304374 0.208258780250758 0.232514358137681 0.218270690787500 0.223767046587768 5 5 + 24573187 24573730 24573450 24571067 24573975 + gene protein_coding_gene TRUE TRUE AT5G61010.1|AT5G61010.2 ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70E1 (exocyst subunit EXO70 family protein E1), protein binding [Arabidopsis thaliana] (TAIR:AT3G29400.1); similar to Os04g0382200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052606.1); similar to Os02g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046915.1); similar to leucine zipper-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB63582.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.147939352608317 1.30803636776903 0.218564455080458 1 0.847521920142663 16.1191258696620 0.147939352608317 0.131092042978181 AT5G27910_at 1.57859421997179 1.24203994953389 1.591657607505 1.42222873764578 0.950309536494251 1.15193350923294 0.885551587138862 1.11209266151214 1.68936318865831 1.40449638759836 1.38346539738163 1.48742539496594 1.52984620279573 1.47655856848369 1.45354668330085 1.26435034911950 1.44240434269541 1.03988964617734 1.483657104501 0.210945614404971 0.207068957968213 0.223203841489722 0.211368266081019 0.212437063339969 0.209354831741184 0.215134600552915 0.215329768342818 0.207068957968213 0.228365562956117 0.212557096347310 0.209136977946103 0.217307108845501 0.212539122331383 0.221940629424171 0.207068957968213 0.207068957968213 0.215915350568308 0.216998052812055 5 5 - 9940834 9941260 9941021 9940740 9941303 - gene protein_coding_gene TRUE TRUE AT5G27910.1 CCAAT-box binding transcription factor Hap5a, putative Identical to Nuclear transcription factor Y subunit C-8 (AtNF-YC-8) (NFYC8) [Arabidopsis Thaliana] (GB:Q4PSE2); similar to CCAAT-box binding transcription factor Hap5a, putative [Arabidopsis thaliana] (TAIR:AT5G50490.1); similar to CONSTANS interacting protein 2a [Lycopersicon esculentum] (GB:AAS67369.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.123637715429214 -1.30735480725654 0.218787530383760 1 0.846749934301353 2.69706333447978 -0.123637715429214 0.0837033769792464 AT5G59160_at 9.43705424532367 9.6207068029775 10.2318690981031 10.3682161618102 10.6768760418589 10.2668202401528 9.85125563626023 9.7497071077349 9.28943653596484 9.08186674285929 10.1693634142150 10.1047767659395 10.0367317974471 10.0552589320043 9.89653703730315 9.97110097634686 9.89099508778075 10.0005585238487 8.98636887750748 0.107724788653852 0.102949591006768 0.105482200205411 0.104077226819729 0.104558972152616 0.108322576364509 0.105409918712431 0.105190465024484 0.118717010019867 0.105877407335625 0.104166826762607 0.102709540135701 0.102709540135701 0.106769988391192 0.103540786768793 0.102750258592006 0.115851352353314 0.104246125725874 0.112205761145058 5 5 + 23897788 23898293 23897987.909 23896563 23898914 + gene protein_coding_gene TRUE TRUE AT5G59160.1|AT5G59160.2|AT5G59160.3 TOPP2 (Type one serine/threonine protein phosphatase 2); protein serine/threonine phosphatase Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. Identical to Serine/threonine-protein phosphatase PP1 isozyme 2 (EC 3.1.3.16) (TOPP2) [Arabidopsis Thaliana] (GB:P48482;GB:Q94B57); similar to TOPP5 (Type one serine/threonine protein phosphatase 5), protein phosphatase type 1 [Arabidopsis thaliana] (TAIR:AT3G46820.1); similar to serine/threonine protein phosphatase 1; PP1 [Malus x domestica] (GB:AAD56010.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.123326230132367 1.30668664765247 0.219006401446574 1 0.845993400503375 19.5927578512633 0.123326230132367 0.083134107435566 AT5G64380_at 8.25638417912073 8.43352596447622 9.05016691449383 8.97973039674894 9.61608297801525 9.4833410345636 8.77311783447021 8.80852377629516 7.30021394529748 8.84327415612282 9.37657872464539 9.4723856082125 9.47922176430075 9.16722402860037 9.51318778259203 9.61958957170212 9.27574921027444 9.3332616257179 8.831205729637 0.146219795131613 0.138224262958486 0.142514815623828 0.146087020745086 0.140212816611714 0.137792941863508 0.139132362300329 0.140322981099516 0.189308416176597 0.143936160570078 0.142802030432450 0.137792941863508 0.139180581076891 0.148164592062830 0.137900238877071 0.137792941863508 0.156020373695316 0.146763939543376 0.150887269603328 5 5 + 25759599 25760216 25759884.818 25758475 25760424 + gene protein_coding_gene TRUE TRUE AT5G64380.1 fructose-1,6-bisphosphatase family protein similar to fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative [Arabidopsis thaliana] (TAIR:AT3G54050.1); similar to fructose-1,6 bisphosphatase [Bigelowiella natans] (GB:AAP79192.1); similar to Os06g0664200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058297.1); contains InterPro domain Inositol phosphatase/fructose-1,6-bisphosphatase; (InterPro:IPR000146) 0.108675046891438 1.30639100828067 0.219103302419621 1 0.845658744713338 17.7898830013687 0.108675046891438 0.0406639868476255 AT5G01350_at 9.61239187948843 9.78287604202374 10.4993571386270 10.3789835709311 10.6729963913068 10.6652824982256 9.3816773262238 9.28418032891 9.73523126617002 9.6370400362481 10.5670635115267 10.3179241199515 10.4217181735121 10.1735310204766 10.1201245392624 10.4040417202841 10.0098021250577 10.1388527162399 9.92021783772056 0.09592614949821 0.0905251752769015 0.0920464040157083 0.0907388195986868 0.0908455475759152 0.0928224747851504 0.0924966424090845 0.0913042457827902 0.100210252668421 0.0901491680332349 0.0941386189698597 0.091000445273529 0.0971819673106718 0.0969448005490955 0.0888441960779591 0.090695742578792 0.100463517504384 0.0920869641614541 0.0968918969107839 5 5|0 -|/ 145985 146884 146451.333 145635 147199 - gene protein_coding_gene TRUE TRUE AT5G01350.1 similar to Os04g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053268.1) 0.108480434111044 1.30629181180431 0.219135823703299 1 0.84554646885218 20.0513657907179 0.108480434111044 0.0398851822889389 AT5G23180_at 1.20479746796542 1.02388691592804 1.27068224912221 1.45381230440040 0.989950541600335 1.61518238119663 1.32440295621651 0.883919011130295 1.74213692320277 1.34683793797603 1.10593785103822 0.879500292428583 1.31684821614928 0.837991531008735 1.02177992606789 0.871004546384869 1.40412332163842 1.08846453084253 1.20621038909684 0.190847777198747 0.194151423138411 0.190847777198747 0.190847777198747 0.191958979325134 0.191111005412813 0.195447255123714 0.191669750710837 0.197510585812557 0.192533083561648 0.191972155266738 0.193614026392967 0.1936521327275 0.192418655546882 0.191253906324135 0.190847777198747 0.197105706455941 0.190847777198747 0.195037851432665 5 5 + 7801477 7801868 7801656.455 7801477 7801893 + gene protein_coding_gene TRUE TRUE AT5G23180.1 similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT4G01260.1) -0.152575103457532 -1.30507824842471 0.219534008644339 1 0.844173376258064 2.46954657529666 -0.152575103457532 0.139650525002425 AT5G35180_at 9.44900639788147 9.37450551373664 9.93062948274484 9.85488161064336 10.3560321738188 10.0223849303294 10.0345925458480 9.76013753847483 9.5023013499226 9.59763668222998 10.2730616065531 10.39448584433 10.2417769804852 10.2587644270226 9.98733618143948 10.1954939678012 10.1816644032065 10.2772769287423 9.3824403391114 0.10673357174516 0.105929665544059 0.107397811660151 0.107713672408655 0.105385963762651 0.111174168665356 0.106221824484107 0.103791359191718 0.119613055049895 0.109348533929659 0.106730224228164 0.103430375559986 0.115000935123110 0.104938613416211 0.105128332942897 0.103430375559986 0.107837757308502 0.108201407132666 0.109016089716611 5 5 + 13448363 13449898 13449251.182 13441648 13450248 + gene protein_coding_gene TRUE TRUE AT5G35180.1 similar to EDR2 (enhanced disease resistance 2), lipid binding [Arabidopsis thaliana] (TAIR:AT4G19040.1); similar to Os08g0439100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061897.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) -0.120570943059359 -1.30502082211088 0.219552865657838 1 0.844108423100121 19.7079506072858 -0.120570943059359 0.0769916593545656 AT5G41600_at 9.6383089774668 9.7585499354366 9.80490377375026 9.79534373777641 10.0569635603474 9.70785560324837 9.45172742844988 9.59462103052585 7.65081941568497 8.49717376055619 9.5916416942828 9.819298806897 9.82854306523066 9.42864867188517 9.65078370111275 9.58949359189068 9.38894977084778 9.69080155737619 8.28680799750974 0.112044013142474 0.111317935725632 0.111901413679360 0.112036906250009 0.113466664825501 0.116332386045002 0.111317935725632 0.112801362240238 0.138416063181825 0.120450964033960 0.112231402648035 0.111790800350298 0.111317935725632 0.118579040339582 0.113014880877841 0.111317935725632 0.127336842774255 0.114261232834386 0.11874760279651 5 5|0 +|/ 16653911 16654538 16654141.778 16653358 16654921 + gene protein_coding_gene TRUE TRUE AT5G41600.1 BTI3 (VIRB2-INTERACTING PROTEIN 3) similar to reticulon family protein (RTNLB3) [Arabidopsis thaliana] (TAIR:AT1G64090.1); similar to Os01g0736900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044177.1); similar to putative 24 kDa seed maturation protein-like protein [Solanum tuberosum] (GB:ABC01908.1); contains InterPro domain Reticulon; (InterPro:IPR003388) 0.117228357768436 1.30489789321176 0.219593236159681 1 0.843969388687835 18.6102611718872 0.117228357768436 0.0685358148290099 AT5G41080_at 1.22993529807986 0.996283709646807 1.11406870346153 1.10628191240697 1.30651412411056 1.19687736533361 1.11915625842920 0.909784981480724 1.26826906824401 1.68970459251782 1.44219065923855 1.18783997635991 0.584870001133361 1.27885312485124 1.21233215071228 1.26461454693823 1.43900175114872 1.33087261628459 1.2470785081159 0.206314244575792 0.206314244575792 0.208889451632920 0.220197085594815 0.210952551984698 0.211247445737773 0.224344954416708 0.213219615256931 0.220468951714814 0.206314244575792 0.20825493939552 0.20938229559875 0.216127202654987 0.211120062976259 0.211554761813888 0.212987161774098 0.224538115364391 0.221551646739316 0.220433951876184 5 5|0 +|/ 16460041 16461033 16460628.25 16458972 16461213 + gene protein_coding_gene TRUE TRUE AT5G41080.1|AT5G41080.2 glycerophosphoryl diester phosphodiesterase family protein similar to SRG3 (SENESCENCE-RELATED GENE 3), glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] (TAIR:AT3G02040.1); similar to glycerophosphoryl diester phosphodisterase [Oryza sativa (japonica cultivar-group)] (GB:ABB90904.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) -0.113248977045477 -1.30368186894880 0.219992913988285 1 0.84259454150476 2.43199074893162 -0.113248977045477 0.0575287036112921 AT5G61865_at 1.25219843407460 1.33902602557311 1.65651241566821 1.48389944528547 1.5470062894732 1.74431162909926 1.17233045438326 1.50171378229021 1.50940537481533 1.46911540666840 1.63087703007242 1.31110973579571 1.52351505306187 1.31235628820201 1.76733228703985 1.23152005393356 1.39607429313444 1.48456922398441 0.967890443436534 0.210364866527563 0.204520894070747 0.208081841740613 0.210919508341329 0.208312593698035 0.217922711351637 0.206466367573436 0.204520894070747 0.209744508216188 0.212405683460014 0.206049669316601 0.206721869781455 0.210816070247046 0.207531793871809 0.204720142594245 0.205035790682747 0.207658964478654 0.211568408577372 0.210650338135108 5 5|0 +|/ 24866298 24866895 24866599.9 24864553 24867018 + gene protein_coding_gene TRUE TRUE AT5G61865.1 unknown protein 0.119347661881558 1.30321903100769 0.220145194733451 1 0.842071489094355 2.84844463646081 0.119347661881558 0.0743847329465736 AT5G10950_at 4.57594498877748 4.77671839065255 6.10119934172146 5.92239760193814 6.77210470078883 5.29255603648909 4.98076451316886 4.62164678430659 4.55570341408275 5.50372559180512 6.81246489831646 6.59527139251876 6.68730476620243 6.42121436836841 6.26284046270723 6.95077102948582 5.76755470596125 5.60926163903834 5.57465887651113 0.221486785996161 0.222119518977218 0.228922494812065 0.222742951183521 0.222548766678602 0.241749930341468 0.219205583884788 0.225959378670944 0.237655752892014 0.231126907694577 0.224309880475131 0.219447772248025 0.222862152422124 0.224973753420789 0.219377037062967 0.221535578808555 0.228524514105623 0.236914479974643 0.222573808429859 5 5 - 3459679 3460086 3459904.818 3459274 3461735 - gene protein_coding_gene TRUE TRUE AT5G10950.1 cylicin-related similar to binding [Arabidopsis thaliana] (TAIR:AT1G80810.1); similar to Tudor [Medicago truncatula] (GB:ABE86625.1); contains domain Tudor/PWWP/MBT (SSF63748); contains domain ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5 (PTHR12663:SF1); contains domain no description (G3D.2.30.30.140); contains domain ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5-RELATED (PTHR12663) 0.237837281109262 1.30222614162062 0.220472162859887 1 0.840949865752169 11.1802655623760 0.237837281109262 0.267553357529120 AT5G37570_at 2.45997953450145 2.11284928101654 2.47503383312154 2.52477428236564 2.42247134016231 2.600787232489 2.34593607352949 2.17244774761339 1.77577106674000 1.80100044369175 2.46184701504154 1.89602686114650 2.27648751927458 2.45702749819654 2.12041443624341 2.16253923068678 2.62952119828712 2.20383318399381 1.95927482137643 0.171295904848177 0.167180606277429 0.172778975118636 0.169422917044838 0.176125995587388 0.175447077907851 0.169193271205419 0.168862801209756 0.181270635444662 0.169201980890194 0.167821113396964 0.168687153652386 0.174160565027011 0.179232383974657 0.168358647131697 0.167057116996591 0.169712949525151 0.189929790066746 0.167057116996591 5 5 - 14941785 14942295 14942000 14941724 14943376 - gene protein_coding_gene TRUE TRUE AT5G37570.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G29230.1); similar to H0622F05.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66421.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.119236942987892 1.30191228575425 0.220575601640528 1 0.840595441350934 4.44994036316401 0.119236942987892 0.0744071226394429 AT5G54260_at 2.78661268872892 2.94274274278841 3.21897433294768 3.05423516717734 3.56482413262527 3.51806369306281 2.97601686821319 3.00655574271337 2.99861949577684 3.52030475207085 3.73061015999590 3.93317708802429 3.56457111050765 3.82523927547003 3.59776928199197 3.72480559456049 3.60447987104487 3.60181291528205 3.27215585345939 0.229956216087434 0.224346926420250 0.223875164295459 0.218191355840656 0.222569163847836 0.218882530255156 0.217442898437573 0.217442898437573 0.219634955007574 0.217442898437573 0.223917304806379 0.218708405602957 0.217442898437573 0.218245402213333 0.224387164326421 0.218591056445763 0.217442898437573 0.226017844767069 0.223603303503601 5 5|0 +|/ 22054019 22054364 22054136 22049295 22055217 + gene protein_coding_gene TRUE TRUE AT5G54260.1 MRE11 (MEIOTIC RECOMBINATION 11); protein serine/threonine phosphatase DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1 Identical to Double-strand break repair protein MRE11 (MRE11) [Arabidopsis Thaliana] (GB:Q9XGM2); similar to meiotic recombination 11 [Triticum monococcum] (GB:CAJ15648.1); similar to DNA repair exonuclease [Medicago truncatula] (GB:ABE84247.1); similar to putative MRE11 [Oryza sativa] (GB:AAX24126.1); contains InterPro domain DNA repair exonuclease; (InterPro:IPR003701); contains InterPro domain Mre11, DNA-binding; (InterPro:IPR007281); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) -0.108239235331920 -1.30176961190900 0.220622636436768 1 0.840434345516183 6.61425393563813 -0.108239235331920 0.0404499305648124 AT5G04830_at 9.70147022274796 9.85445560049738 10.7260398128814 10.7658496304502 10.8792952236498 10.5120813959024 10.0398303091257 10.0635024336645 9.54725622961847 9.6351730707629 10.3509831890181 9.95490004923034 10.3712654726475 10.5142338997686 9.76165842082955 10.3681956102089 10.3113737275204 10.4363745869369 9.37034177449524 0.105720498545735 0.099336153388008 0.102899757421057 0.102992360319690 0.106260804095989 0.102813062650010 0.111276661862033 0.101676756597522 0.113380966912550 0.103852962589775 0.0987006234234655 0.098769996381312 0.0993961652488446 0.099427357680761 0.0997803821163498 0.101372649450116 0.112694850377219 0.0990080116811012 0.111569727289989 5 5|0 -|/ 1402295 1403646 1402846.667 1402046 1403962 - gene protein_coding_gene TRUE TRUE AT5G04830.1|AT5G04830.2 similar to hypothetical protein AN2221.2 [Asper (GB:XP_659825.1); similar to Os01g0965900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045497.1); contains domain NTF2-like (SSF54427) 0.117152592232468 1.30081822019003 0.220936489241509 1 0.839360427269767 20.2059223175210 0.117152592232468 0.0693074124544409 AT5G48630_at 6.84301154281401 6.90562345276299 7.64828884470703 7.47636231328628 7.99476976159847 7.5307033778209 7.65754868748143 7.56095634805604 6.39896441531948 6.42422261547418 7.77541674373607 8.10796508926975 7.6307885089075 7.78381997825613 8.34509702646509 7.72735562566569 7.57390373770327 7.5413594513366 6.57683124417577 0.201331860016139 0.180383609865345 0.189303242804551 0.192334138799394 0.180934862709949 0.189674010895834 0.179471366955597 0.179877354988449 0.195459135796017 0.187894954049481 0.181238565913473 0.182785797200022 0.1820258883513 0.186877373443197 0.183053312125332 0.180073294582915 0.200584267304719 0.188026854862745 0.179575605640273 5 5|0 -|/ 19739083 19739914 19739498.111 19738772 19740460 - gene protein_coding_gene TRUE TRUE AT5G48630.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48640.1); similar to G1/S-specific cyclin C-type (GB:P93411); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) -0.124774119578741 -1.29960018131785 0.221338841109014 1 0.837986325996162 14.5908510553112 -0.124774119578741 0.087929255546833 AT5G66400_at 8.46769934058434 8.47338124651754 8.94103055616946 8.8514106558279 9.27165824633642 8.83935233249972 8.22221893962064 8.16491593290815 8.05686925586063 6.84384475029766 8.93688280837148 8.79347942188397 8.60199237785875 8.49179938412755 8.82811693818988 8.51323067688912 9.05172674740109 8.94685580502027 7.48129498100636 0.136081562374572 0.124069447071486 0.125361764768129 0.130608572338292 0.133496038989014 0.131654747203534 0.124553582686992 0.124069447071486 0.135330749739028 0.147845052370395 0.124069447071486 0.131637413028114 0.126990484850449 0.125018428863403 0.127840450287483 0.126507000349826 0.126971205235446 0.127930362157121 0.141506742732294 5 5 - 26535812 26536344 26536098.455 26535503 26536468 - gene protein_coding_gene TRUE TRUE AT5G66400.1|AT5G66400.2 RAB18 (RESPONSIVE TO ABA 18) Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. Identical to Dehydrin Rab18 (RAB18) [Arabidopsis Thaliana] (GB:P30185); similar to dehydrin, putative [Arabidopsis thaliana] (TAIR:AT3G50980.1); similar to hypothetical protein [Plantago major] (GB:CAJ38406.1); contains InterPro domain Dehydrin; (InterPro:IPR000167) 0.119999163516484 1.29857210954545 0.221678909751819 1 0.836827235353168 16.7695484974860 0.119999163516484 0.0770503514273592 AT5G25475_at 2.52746619451569 2.73303502467392 2.76519194380133 2.32872497162503 2.92939844111881 3.0210170652597 2.70775124310501 2.26668131120264 2.18450925667032 2.75503892003664 2.56027716858820 3.14202120342331 2.84189633502402 2.84066789109356 3.06177229009212 2.82544057337501 2.77682066792806 2.73407912926128 3.01907913468134 0.212995436545507 0.212246711721379 0.212073952670636 0.209016532563255 0.208496371745978 0.215049110506684 0.210647623956407 0.208452067945912 0.208452067945912 0.218936447695112 0.212921433393352 0.221434361653912 0.211605365257127 0.209601996660214 0.209631432783275 0.208452067945912 0.218450047671283 0.222380807237305 0.208452067945912 5 5|0 -|/ 8867934 8868578 8868241.333 8867802 8869824 - gene protein_coding_gene TRUE TRUE AT5G25475.1|AT5G25475.2|AT5G25475.3 DNA binding similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25470.2); similar to Transcriptional factor B3; Cupredoxin; TonB box, N-terminal [Medicago truncatula] (GB:ABE81225.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.137562213761299 -1.29823150795805 0.221791669524247 1 0.836443369217427 5.41028211331825 -0.137562213761299 0.114229006513835 AT5G15720_at 0.663402257002734 0.887968748638002 1.63504663553492 0.90480706135067 0.946814048385194 1.29267766550617 0.7368430601489 1.10870105505144 1.42939618049467 0.912953018775222 1.52011067577491 1.13067590817701 1.58749261601361 1.02353344047577 1.18281150822810 1.11444317961026 1.38171271105734 1.70888265111769 1.25966144748717 0.202568983465005 0.20115682347618 0.208314220381618 0.201757759604470 0.205811993607031 0.200470928985665 0.20776308963774 0.202871446369005 0.212825591644686 0.212594341547354 0.203388422802753 0.201098985881997 0.203763340493769 0.200470928985665 0.202483012554177 0.201827610954357 0.215116630538539 0.212351230518611 0.204016502852216 5 5|0 -|/ 5124702 5125435 5124943.8 5124528 5126184 - gene protein_coding_gene TRUE TRUE AT5G15720.1 GLIP7 (GDSL-motif lipase 7); carboxylic ester hydrolase Contains lipase signature motif and GDSL domain. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G29670.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96893.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.163299483375974 1.29819689505492 0.221803131128733 1 0.836404363610304 2.28797159239852 0.163299483375974 0.158756311236486 AT5G46190_at 5.56959587891967 5.98953455737335 6.21689733451842 5.7484307859302 7.20144769242244 6.89612356350363 6.02387637903976 5.7212343126117 5.39072594125282 5.86380287136989 6.39097265917289 6.98419033178414 6.78830077296948 6.50390432541209 6.52025773973853 7.07725066045331 6.49718833306558 6.75252908770581 5.52957952935254 0.219103590480455 0.214268108528724 0.220476106469856 0.210103311936785 0.214667206428359 0.218516925834995 0.212179361540457 0.221452222239220 0.217895573147780 0.217805412108265 0.213713596769962 0.213300440733822 0.221318906909288 0.216852887765426 0.219821297063712 0.210103311936785 0.240785053197909 0.220571984372185 0.210103311936785 5 5 - 18740665 18741411 18741023.636 18740345 18743427 - gene protein_coding_gene TRUE TRUE AT5G46190.1 KH domain-containing protein similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G18375.2); similar to Os08g0200400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061211.1); similar to KH, type 1 [Medicago truncatula] (GB:ABE79454.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain KH, type 1; (InterPro:IPR004088) -0.147160541764839 -1.29725774189254 0.222114304886317 1 0.835346302180027 12.3129060727630 -0.147160541764839 0.131865433263913 AT5G54180_at 4.26131479842262 5.03476365461257 5.23028789509041 5.12053809984377 6.28066914986235 5.99124619621253 5.96829279974412 6.10357964651944 4.99333868698805 5.15162509624914 6.16033380907644 6.97175552247136 6.36096181223766 6.24227035949503 7.03089970738197 6.42047386470575 6.35000387131972 5.79504005746726 5.00927299151677 0.253175826004417 0.250226481584475 0.245348177994694 0.245348177994694 0.24915249423431 0.263261799296442 0.245706877657429 0.250339944687496 0.252200845642805 0.256994268123542 0.245348177994694 0.248653600072767 0.259381657587361 0.249588202322284 0.245348177994694 0.245348177994694 0.253221679001515 0.250041120331628 0.257646538385165 5 5 + 22006821 22007362 22006997.727 22005683 22007454 + gene protein_coding_gene TRUE TRUE AT5G54180.1 PTAC15 (PLASTID TRANSCRIPTIONALLY ACTIVE15) similar to EMB2219 (EMBRYO DEFECTIVE 2219), transferase [Arabidopsis thaliana] (TAIR:AT2G21710.1); similar to Os07g0134700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058844.1); similar to mTERF [Medicago truncatula] (GB:ABE87961.1); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) -0.155452628407778 -1.2972528421778 0.222115929269495 1 0.835340783513713 11.2327763469238 -0.155452628407778 0.146058169853107 AT5G09780_at 2.09772554885720 1.92673507662528 2.7636160739207 2.29049228988201 2.24078874736518 2.27029328220847 2.2919823848258 2.63804280585735 2.31189054459071 2.46851040659844 2.66603543022136 2.57087972643665 2.4841229557099 2.4587308087282 2.23823490929494 2.38534854827251 2.54304923437498 2.66491344427287 2.47664093882839 0.181020097812068 0.188711503211593 0.183236134903137 0.197147004817289 0.188303778345079 0.183888941507900 0.183086615738333 0.185483376074591 0.187965676732420 0.178170993511201 0.178170993511201 0.182271648428531 0.187535074768693 0.187667797819603 0.181683124421693 0.179859636875298 0.185735516274768 0.183544006124174 0.185006535405341 5 5|0 -|/ 3036960 3037513 3037208.9 3036957 3038485 - gene protein_coding_gene TRUE TRUE AT5G09780.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G16210.1); similar to reduced vernalization response 1 [Brassica rapa] (GB:AAR92199.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.133072999082034 -1.29705454533627 0.222181678024681 1 0.835117449326962 4.7751736989443 -0.133072999082034 0.105791783704692 AT5G04440_at 9.7183499021171 9.56203104566037 10.4356470564011 10.3941773483162 10.4066844826602 10.3048505133350 10.1077076753242 10.1243363064858 9.56015610749371 9.69249737909653 10.1457334293047 10.1174052724116 10.3307343585887 10.38819641653 10.076970404715 10.5406664732602 10.3102509239687 10.1950449391323 9.72693959756752 0.094885596022033 0.0919233260762446 0.0945979343017645 0.095657094315771 0.0900585646184989 0.0949519887562895 0.0900585646184989 0.0969782447008784 0.0961054317559386 0.0931551205816917 0.0940688456464265 0.0927000605764912 0.0903238539137248 0.0967902975045894 0.0962783410361153 0.0940019280590573 0.0989271623529995 0.0949123870757355 0.0932280317959318 5 5|0 +|/ 1255333 1256102 1255733 1254845 1256954 + gene protein_coding_gene TRUE TRUE AT5G04440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31115.1); similar to Os03g0146500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048959.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55108.1); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) -0.106258162536677 -1.29702228117775 0.222192377276426 1 0.835081113704899 20.0932178605999 -0.106258162536677 0.0331985381807161 AT5G10070_at 7.58423776723261 7.24585234669127 8.58566331361211 8.41109385321514 8.67328593317042 8.31544243306465 8.21337514907466 7.8495858828734 6.73429231985574 6.36327204351829 7.5687746470093 7.802421450632 7.91352745311708 7.93250188820429 8.0185512326794 7.80634379648363 8.06866940546229 7.6119985732419 6.12769276164469 0.159613008405271 0.158609655769215 0.166853922165288 0.156118252937188 0.161708609340993 0.171804630345997 0.160299984076787 0.160508496143489 0.180984847226499 0.178625300209487 0.158008279688419 0.159757523315096 0.165573365705413 0.161963668827976 0.159763400811543 0.157276109779752 0.163203241084192 0.162402735894653 0.165749944097895 5 5|0 -|/ 3148732 3149512 3149191 3148523 3150435 - gene protein_coding_gene TRUE TRUE AT5G10070.1|AT5G10070.2 RNase L inhibitor protein-related similar to 80A08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67589.1); contains InterPro domain Possible metal-binding region in RNase L inhibitor, RLI; (InterPro:IPR007209); contains InterPro domain Protein of unknown function DUF367; (InterPro:IPR007177) 0.135296494271803 1.29683019144813 0.222256085703175 1 0.834864797041834 15.2342008836301 0.135296494271803 0.110182124162897 AT5G09995_at 3.43631508277609 3.43640636117024 3.49198810987529 3.73061074044246 4.64819605072266 3.67692770228608 3.69976017596483 3.54397116903650 3.69519884620731 3.44132212965129 5.4711653869614 5.74984484942765 4.32791097759993 4.41057685802936 6.09925027173364 4.45922390750237 4.171376845589 5.15612859032317 3.41625038560242 0.218781198751664 0.208988031479643 0.212971802240641 0.213465205149614 0.212896543756235 0.215496388595317 0.21236321786915 0.214947661305635 0.210363131963211 0.214243246989348 0.208146713159259 0.212034447427140 0.215237262459686 0.210588805168576 0.230088810370743 0.208146713159259 0.224602533895398 0.213604736244236 0.209963634811862 5 5|0 -|/ 3125489 3126252 3125991.4 3125039 3126379 - gene protein_coding_gene TRUE TRUE AT5G09995.1|AT5G09995.2|AT5G09995.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08530.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89404.1) 0.173370056149066 1.29601856673508 0.222525434424518 1 0.83395105667997 7.95715950639234 0.173370056149066 0.175168012029309 AT5G58650_at 6.8494025303195 7.57367230452906 8.67358349900637 8.75749031231425 9.56003053387396 8.44741789103215 8.04453781020249 7.49625341089506 6.62244884487975 7.1502664223645 8.14191605905275 7.29740769811743 8.04694989513707 7.99071816874804 7.1434612381261 8.99811767162112 8.59701317526915 7.3479389710407 7.17143927513499 0.253640120582535 0.263302926917364 0.259624945637771 0.249099502904781 0.249771866138661 0.266998236618292 0.252158169993819 0.260263604069028 0.274306405124671 0.262794341144871 0.244328169396781 0.242264252687323 0.258752487653316 0.26268358006269 0.251747284336008 0.246170307160624 0.260906682506918 0.259043508917794 0.250314044136380 5 5|0 -|/ 23717153 23717388 23717273 23716934 23717452 - gene protein_coding_gene TRUE TRUE AT5G58650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G47295.1) 0.223338203195635 1.29524056567862 0.222783876016429 1 0.833075548416864 15.638711140071 0.223338203195635 0.248990105794661 AT5G38180_at 0.882934370052828 1.37397063857105 0.938720140085937 1.12484340702752 1.00776889071272 1.22743060779687 0.559101111745654 0.873788413340426 1.05538240298119 1.39462444306451 1.17724736693292 1.08674825389771 0.77538348131802 1.27384560510826 0.883792746727372 0.770768338814997 1.24420682677559 0.954452178113855 1.46313070234497 0.158152024592585 0.159575511470214 0.158058080140758 0.160064592416717 0.155522176989390 0.156012677375022 0.158606039660530 0.153871115507511 0.173263299030349 0.155356816493700 0.159210387026508 0.158917538703655 0.166748024957224 0.162210991463135 0.155937896553581 0.160584027670618 0.161081818725852 0.167450301144377 0.164214022255989 5 5 + 15247111 15247348 15247223.909 15247040 15247473 + gene protein_coding_gene TRUE TRUE AT5G38180.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38195.1); similar to lipid transfer-like protein [Brassica napus var. napus] (GB:AAS68185.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.136352996172333 -1.29511320357361 0.222826207454892 1 0.832932259227543 2.16116208867062 -0.136352996172333 0.112557107440682 AT5G14890_at 1.74601777694687 2.11056066689244 2.00555034708612 1.73402571985325 1.98227496023149 1.42171405289303 1.85076356700746 1.69059196756704 2.45900050796118 2.07685388109814 2.07432611643737 2.50382651242165 2.25955213058155 2.0679687160991 2.02150609800841 2.37344904258953 2.65893034131078 2.65813106012288 2.06862060732821 0.269756796252768 0.267821163047445 0.267567477911562 0.267828252637184 0.267366902927606 0.264017105276833 0.260349005992426 0.271883661644103 0.263822167312987 0.264335962920812 0.273098247427675 0.260457810780626 0.270210601368143 0.265503018784523 0.263608282482823 0.261334061229407 0.273041268969578 0.263897996718499 0.259783616331978 5 5 + 4820945 4821470 4821181.727 4817952 4821811 + gene protein_coding_gene TRUE TRUE AT5G14890.1 NHL repeat-containing protein similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G70280.2); similar to Os06g0269300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057356.1); similar to NHL repeat [Medicago truncatula] (GB:ABE85368.1); similar to Os02g0730400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048013.1); contains InterPro domain Soluble quinoprotein glucose dehydrogenase; (InterPro:IPR011041); contains InterPro domain NHL repeat; (InterPro:IPR001258) -0.144545047042979 -1.29376997582509 0.223273058867467 1 0.83142166051484 4.08203884113917 -0.144545047042979 0.127931836708366 AT5G29090_at 2.37193972230703 1.75309099919481 1.57118885118529 1.96448724394900 1.69054510644268 1.91535916313088 1.73912576236925 1.52943841567367 2.39280997331612 1.857121310598 2.14967431999089 1.85849835127455 1.79741085523474 2.04326143928227 2.18860993125797 2.01372794990998 1.82998615779442 2.19075450224864 1.56785311153104 0.178925103183069 0.177167743782423 0.177827898587286 0.175712828764766 0.174568048731089 0.175347304725248 0.178328770746429 0.175114180712491 0.180234599757577 0.177734613102773 0.181861621835408 0.178344469319342 0.188237826222956 0.183768789994659 0.175770817923555 0.17191651699512 0.180613844455576 0.17191651699512 0.205544571469749 5 5|0 +|/ 11149643 11150518 11150280.3 11149626 11150544 + gene protein_coding_gene TRUE TRUE AT5G29090.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G33131.1) -0.149686518689058 -1.29058734632182 0.224334756743625 1 0.827846877057804 3.79102285979286 -0.149686518689058 0.137593967700972 AT5G04970_at 0.876305757224363 1.10587036166763 0.566978556541735 0.87386682593905 0.871872241148128 0.766002007048024 1.06320658630941 0.550785139939619 1.56869852630713 1.16334216899985 1.21735799110084 1.19400177369755 1.44989737075166 1.20788680667099 0.767285141871538 1.37831454534743 1.25183212494757 1.46055250965544 1.00775591852877 0.188458699687718 0.186586550664290 0.201452902033996 0.186586550664290 0.186586550664290 0.186680236509725 0.191344479288713 0.189389153896756 0.186586550664290 0.188172343431921 0.189503996110506 0.186586550664290 0.191429486737990 0.187224470734413 0.197006462176259 0.186795399026867 0.192745003628211 0.196776246226293 0.190076242611483 5 5 - 1464293 1464903 1464513.364 1464146 1467042 - gene protein_coding_gene TRUE TRUE AT5G04970.1 pectinesterase, putative similar to pectinesterase, putative [Arabidopsis thaliana] (TAIR:AT3G10720.2); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); similar to Os01g0311800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042865.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -0.135705347478433 -1.29052678751131 0.224354998673999 1 0.827778916619885 2.07810588661923 -0.135705347478433 0.112240934010772 AT5G07250_at 8.0716043136475 8.2548026514374 8.91797231965278 8.9512704151861 9.50191145308128 9.26140418514367 8.98679399972899 9.03490925377848 8.72561312603357 8.64772236238924 9.4578090049743 9.24935354773611 9.46795911369894 9.41310644905548 9.04798237036914 9.4715080276383 9.14331046018399 9.63008271998273 8.37529551188482 0.121923671176854 0.116172822807316 0.123473887162976 0.117363666816368 0.114326124488704 0.116534242695612 0.120135537344537 0.115494570147894 0.115778499374315 0.117956240649740 0.117706996130994 0.112202943125487 0.111725231430809 0.117619818149122 0.121762113326896 0.115133616421213 0.125015313152024 0.116415025321212 0.115918894172292 5 5|0 -|/ 2274484 2275238 2274821.7 2274261 2275991 - gene protein_coding_gene TRUE TRUE AT5G07250.1 rhomboid family protein similar to ATRBL2 (ARABIDOPSIS THALIANA RHOMBOID-LIKE 2), serine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT1G63120.1); similar to membrane protein [Saccharum hybrid cultivar H65-7052] (GB:AAA02747.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) -0.110580051039786 -1.28820169326928 0.22513329905099 1 0.825171348350207 17.8440915548607 -0.110580051039786 0.0532910640763403 AT5G47580_at 7.42337463645275 7.19200424529795 7.63524064217065 7.64323262167109 7.6574790094992 7.57504779740359 5.44648482677202 5.28258228524536 5.08224300560062 4.90537112500452 5.79574935194863 5.79482545872617 5.56380535247563 5.88801439455602 5.75368435781305 5.76149022794996 6.03937662228915 5.8765015168964 5.71504098573663 0.17982055802365 0.181013555400768 0.191856266354067 0.179846668417684 0.179403450065321 0.193690954715056 0.182044516832146 0.180500690363694 0.188646277241885 0.186195014447190 0.185828515462364 0.18139695296801 0.180478471192182 0.179410038535889 0.182021524916222 0.185602906284252 0.178446859907845 0.185827985232462 0.185713718137304 5 5 - 19312189 19312747 19312483.545 19312072 19314644 - gene protein_coding_gene TRUE TRUE AT5G47580.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17250.1); similar to At5g47580/MNJ7_17 [Medicago truncatula] (GB:ABE80901.1); similar to hypothetical protein 40.t00008 [Brassica oleracea] (GB:ABD65133.1); similar to Villin headpiece [Medicago truncatula] (GB:ABE80900.1) -0.109894346114678 -1.28772836276954 0.225292011837388 1 0.82464092047821 12.5036303992870 -0.109894346114678 0.0511185659940836 AT5G54570_at 1.08766077254795 1.29746143015787 1.93924524879868 1.45615419897238 1.48116758635769 1.81339937477201 1.58173901413755 1.60232518382893 1.75710993122891 1.74491798764376 2.44156096717243 1.91738258817017 1.88206662139822 2.15808112266862 1.14771788855020 2.20208795849132 1.94932591765055 1.87095877450726 1.63320953213562 0.183931653937621 0.185793120398015 0.180802985235397 0.179262067290477 0.181388656782113 0.182766667835747 0.184169096888142 0.186733990326976 0.184174756425304 0.179262067290477 0.179262067290477 0.187498664009689 0.182024287569000 0.187377961443422 0.186589862732189 0.179262067290477 0.195922683590296 0.185878513866150 0.188932523938006 5 5 - 22184916 22185756 22185186 22184862 22187461 - gene protein_coding_gene TRUE TRUE AT5G54570.1 glycosyl hydrolase family 1 protein similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G26560.1); similar to Os10g0323500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064347.1); similar to Os03g0212800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049358.1); similar to beta-glucosidase, putative [Medicago truncatula] (GB:ABE90952.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.133088894758208 1.28722240739659 0.225461765340384 1 0.82407408468227 3.36134087461106 0.133088894758208 0.107822225946216 AT5G20350_at 9.05424715580342 9.2680289358315 9.7156672623946 9.8338329677997 9.97136757338212 9.62942106278365 8.82233044924948 9.0082707575348 9.53019044381685 9.2887163768006 9.73489136849043 9.79821200740755 9.87333662309694 9.91339286689401 9.58675337752868 9.9280360747426 9.77460226787148 9.95225755129841 9.3151433254667 0.0869699254869588 0.0820821800417579 0.0915588169548934 0.088527846907974 0.0829432386208267 0.0943204827372953 0.0820821800417579 0.0889465773631223 0.093583672635985 0.0862699474457904 0.0878251419427179 0.0848324924217818 0.0851817510018187 0.0820821800417579 0.084530325009113 0.0846403820721353 0.0892488807852305 0.0820821800417579 0.088035212413847 5 5|0 +|/ 6880227 6881052 6880708.3 6876591 6881272 + gene protein_coding_gene TRUE TRUE AT5G20350.1 TIP1 (TIP GROWTH DEFECTIVE 1) Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. Identical to Palmitoyltransferase TIP1 (EC 2.3.1.-) (Ankyrin repeat-containing S- palmitoyltransferase) (Protein TIP GROWTH DEFECTIVE1) (TIP1) [Arabidopsis Thaliana] (GB:Q52T38); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT2G14250.1); similar to Os06g0644500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058187.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE93297.1); similar to Os02g0184000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046105.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) -0.119743978874493 -1.28484375736848 0.226261231286087 1 0.821411330367671 19.0119967618612 -0.119743978874493 0.0795236546677374 AT5G13910_at 2.43029349969415 2.56099354874523 2.41104921883701 2.63241581926537 2.52337461015018 2.67046989708326 2.12674899366059 2.41666643056242 2.72550898994464 3.19779993213751 3.32088233825918 2.80952505572559 3.14128024569668 3.16685899967143 3.16254384378729 3.15877657767847 2.71445077165923 3.08281116166253 2.4956524347324 0.232948005323612 0.229385223248014 0.228318193849241 0.231516814581952 0.235679212947509 0.231480885524809 0.228069817663487 0.231279012401663 0.234774050231234 0.23161784885101 0.238000654754107 0.228069817663487 0.232540345364126 0.232534996048985 0.2377559588014 0.228069817663487 0.228069817663487 0.231749756056813 0.228069817663487 5 5 - 4482467 4482947 4482691.636 4482452 4483087 - gene protein_coding_gene TRUE TRUE AT5G13910.1 LEP (LEAFY PETIOLE); DNA binding / transcription factor Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination. similar to ethylene-responsive element-binding family protein [Arabidopsis thaliana] (TAIR:AT1G28160.1); similar to Os04g0399800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052680.1); similar to OSIGBa0113L04.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66464.1); similar to branched silkless 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD26338.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.116624018974838 -1.28478595856534 0.226280686320246 1 0.821346671518454 5.40948229051931 -0.116624018974838 0.0717237613544252 AT5G35870_at 0.197099294341018 0.278527478447185 0.984449811621169 0.697124583827781 0.577332700141151 0.838602464623095 0.682769005407866 0.242492412485192 0.649519199135079 0.925520875180219 0.686215686842443 1.15298834558369 0.83886040762824 0.589229859055992 0.531092629960758 0.641243243637109 1.13365368119518 0.844506142501464 1.00672073913332 0.205112135511570 0.20970440306269 0.207855338638354 0.20914536053246 0.204319080794147 0.204319080794147 0.204319080794147 0.212932598398282 0.214314564812282 0.210403386636724 0.208253090780288 0.206359049360714 0.214445879780292 0.210118114639955 0.206063793062619 0.209279982182828 0.209300778513201 0.220917385556435 0.206031387290909 5 5 + 14038260 14038726 14038511 14038252 14038842 + gene protein_coding_gene TRUE TRUE AT5G35870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04480.1); similar to Os12g0498900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066815.1) 0.130198655705557 1.28462235433823 0.226335762797557 1 0.82116366054285 1.39370506254521 0.130198655705557 0.102569267673781 AT5G08210_at 3.88747139575602 3.14625192652833 4.17413071967963 3.71913779558998 4.06787062478394 3.87646584917096 2.57230189891154 2.9080281105672 3.65257215941702 3.40153650656910 3.80220921180116 4.1630587385928 3.8564321232458 3.86963671999951 3.74773021405747 4.54060053740905 3.83742637544222 3.66511715432778 4.26532032161079 0.202451052622534 0.199263045767225 0.20342197931499 0.208519004627917 0.199263045767225 0.207152718773436 0.207144341149807 0.216766742856149 0.214899975269041 0.201821363834419 0.207068607167879 0.199263045767225 0.200778506300400 0.204249657557792 0.199263045767225 0.201894892836031 0.206616504186566 0.210143544326666 0.199263045767225 5 5 - 2641466 2641642 2641554.818 2641265 2641761 - gene protein_coding_gene TRUE TRUE AT5G08210.1 unknown protein -0.165197411974285 -1.28412567743294 0.226503033542327 1 0.820608168939392 7.398166980236 -0.165197411974285 0.164699746606011 AT5G27170_at 0.736840834204478 0.172978559190578 0.430479456151124 0.129914892852441 0.500449771764423 0.234405792458167 0.308166670315593 0.389263996302016 1.07983574278136 0.575842734229281 1.03505544847259 0.98205779265806 0.424163851530926 0.786375591421638 0.584390098827315 0.416977191999474 0.610450464974097 0.590483269292876 0.688346389557339 0.230631255849299 0.225215463082433 0.225051053789260 0.22947619185829 0.233487256438376 0.232104937686008 0.228787485354053 0.221815128122430 0.221815128122430 0.229323976363884 0.227332353477583 0.225961132191204 0.224018535394553 0.232823605034109 0.221815128122430 0.221815128122430 0.234417598443711 0.226407344065741 0.228929732368075 5 0|5 /|+ 9566174 9566388 9566291 9566010 9566415 + gene protein_coding_gene TRUE TRUE AT5G27170.1 unknown protein -0.139288081178323 -1.28262303413392 0.227009708910240 1 0.81892851526506 1.09285541457308 -0.139288081178323 0.120597609332663 AT5G24480_at 1.31057488369389 1.41738683151722 1.78441768234332 1.17547521550033 1.13176826625930 1.69729347565651 1.42622644880263 1.66620240372157 1.85080701429546 2.08729974475842 1.47957183477509 2.04628903061966 1.90951641858507 2.19050104846672 2.07423151898370 1.90342833632081 1.56946443950349 1.86994244613645 1.87381151180751 0.199368616004266 0.197446531531814 0.209126198878786 0.197446531531814 0.197446531531814 0.206352487852781 0.202921239955476 0.202561065289264 0.197446531531814 0.202086770043046 0.202547903658738 0.200601989200101 0.199577624434596 0.197446531531814 0.204259260142364 0.200691661338679 0.205132882421381 0.204774313920862 0.204203820711352 5 5 - 8363860 8364335 8364108.455 8363834 8365039 - gene protein_coding_gene TRUE TRUE AT5G24480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01080.1); contains domain gb def: Gb|AAD32930.1 (PTHR23421:SF3); contains domain BETA-GALACTOSIDASE RELATED (PTHR23421) -0.156527446729536 -1.28253143769007 0.227040624188011 1 0.818826173916743 3.36000526316735 -0.156527446729536 0.150828526289179 AT5G39840_at 0.94643137784992 0.9121986984757 1.47445740084961 1.77864967779830 1.68664450414829 1.36460015926631 1.75225758071723 1.27025235295755 1.25132534199386 1.05798995863536 1.04893849570735 1.48369753428391 0.966267605523115 0.88857785686773 1.22716867188598 1.26132806124263 1.67001618105009 1.33753058851910 1.13663463160992 0.200030104779932 0.195436386371232 0.200386363397696 0.198188942081317 0.195716818500015 0.196033371636528 0.194672095602808 0.196890756437753 0.204029557744555 0.196347631440311 0.196231166552430 0.201769473816186 0.207682674433956 0.206675645881338 0.195418131870739 0.197353438255005 0.197291219934625 0.212395059569749 0.199715905040725 5 5 + 15965728 15966121 15965905.636 15963997 15966414 + gene protein_coding_gene TRUE TRUE AT5G39840.1 ATP-dependent RNA helicase, mitochondrial, putative similar to ATSUV3 (embryo sac development arrest 15) [Arabidopsis thaliana] (TAIR:AT4G14790.1); similar to PREDICTED: suppressor of var1, 3-like 1 [Pan troglodytes] (GB:XP_521497.2); similar to suppressor of var1, 3-like 1 [Homo sapiens] (GB:NP_003162.2); similar to OSJNBa0072F16.4 [Oryza sativa (japonica cultivar-group)] (GB:CAD40979.2); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.135488320806143 1.28251388006115 0.227046550564010 1 0.818806557247062 2.59023176990688 0.135488320806143 0.11344606601646 AT5G36840_at 2.68462343743788 1.42970523086321 2.20358365860495 2.14030342523320 1.76532550058949 1.42394116036590 2.25563243516915 1.65612016912668 2.70758862676072 2.24543852160291 2.59358731325949 2.35691883327288 2.30380539430581 2.17284628209024 1.23463028576990 2.48355033009784 2.72951617245407 2.03791141675091 1.61812010369876 0.320830729961732 0.313275787408715 0.313275787408715 0.313275787408715 0.313275787408715 0.313275787408715 0.313275787408715 0.313275787408715 0.314911598654417 0.315092537585533 0.313275787408715 0.313275787408715 0.313275787408715 0.330714831985548 0.313275787408715 0.320859007392029 0.313275787408715 0.319982078976235 0.352863183735646 5 0 / Inf -Inf NA 14525317 14527433 - gene protein_coding_gene TRUE FALSE AT5G36840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24380.1); similar to hypothetical protein 40.t00047 [Brassica oleracea] (GB:ABD65162.1); contains domain Hedgehog/intein (Hint) domain (SSF51294) -0.219932698321402 -1.27923393020568 0.228155879106073 1 0.815145301329661 4.15964346260094 -0.219932698321402 0.248065414010110 AT5G27720_at 9.26288572992717 9.45657198394665 9.91671598459513 10.0629253376034 10.0779068852991 9.78875366480726 8.99669731148496 9.1278283054553 8.95868757879695 8.48902930018495 9.7840236001748 9.78636647460609 9.4574124269574 9.77287059873442 9.58757348402224 9.63979407674764 9.65439218096124 9.73503481636984 8.78269021699629 0.131968149886209 0.13538350821793 0.137987180239169 0.140500928492675 0.142195814104382 0.143876111078747 0.131968149886209 0.133727435541742 0.142850710770937 0.144236292816751 0.135271062305641 0.133403527685213 0.136688600240111 0.142086444583571 0.131968149886209 0.137673733739995 0.143644935583817 0.139048193353045 0.146148253812064 5 5|0 +|/ 9816008 9817126 9816628.429 9815560 9817603 + gene protein_coding_gene TRUE TRUE AT5G27720.1 EMB1644 (EMBRYO DEFECTIVE 1644) similar to SMD3 (SNRNP CORE PROTEIN SMD3) [Arabidopsis thaliana] (TAIR:AT1G76300.1); similar to Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core [Medicago truncatula] (GB:ABE94505.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649) 0.115051369545047 1.27811093136348 0.228536709728106 1 0.813893280511067 18.7966118950471 0.115051369545047 0.069156173607471 AT5G04950_at 8.24577354987886 8.62673952213957 10.2415339024439 10.3646959935635 9.82315416019203 9.9568206164707 10.9737205407500 11.1092294381625 6.49497930388835 9.92822142719547 9.56694373107024 7.187972085718 9.7788970292759 9.73265923226256 6.7399109687325 9.26624985688481 10.7346120906413 9.90531313582163 8.26928484324453 0.168201468750956 0.168428276790589 0.166152105459566 0.164058853288580 0.160923954505578 0.164649297329043 0.170888931707314 0.160873007844831 0.222991332873385 0.168955821790492 0.163052252147292 0.176769585206303 0.162741468385728 0.165958173276427 0.200259730497087 0.164305313178767 0.161632765132129 0.168754224955828 0.188105396819408 5 5 - 1457931 1458439 1458143.091 1457646 1458891 - gene protein_coding_gene TRUE TRUE AT5G04950.1 nicotianamine synthase, putative Identical to Nicotianamine synthase 1 (EC 2.5.1.43) (S-adenosyl-L-methionine:S- adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3- carboxypropyltransferase 1) (AtNAS1) (NAS1) [Arabidopsis Thaliana] (GB:Q9FF79;GB:Q9ZWF8); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT5G56080.1); similar to nicotianamine synthase [Thlaspi caerulescens] (GB:CAC82913.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) -0.117943273380125 -1.27776733604464 0.228653333139735 1 0.813510365524868 18.5901576109886 -0.117943273380125 0.0767187366513548 AT5G46360_at 1.66523466275057 2.03552656501103 2.33397431951847 2.75892343818231 1.79837794142925 2.12009204912899 1.84456636968296 1.96822819881323 2.38408914513548 2.54379095882636 2.13040687168334 2.13665947830689 2.16699580156523 2.01821189474992 1.79085376277747 2.0211246579799 2.45996477825765 2.87660120231430 2.37662027030334 0.204348915725846 0.202581464849719 0.210401849922631 0.209920306953649 0.203459030511530 0.206848395990883 0.205196072472337 0.211317376937079 0.20119040536549 0.20188244902398 0.206346121542777 0.207668190208942 0.200905839540728 0.201205866363140 0.215538921947962 0.203807337668336 0.205052456403253 0.202220505412872 0.203294312187275 5 5|0 -|/ 18824097 18825126 18824894.2 18824048 18825451 - gene protein_coding_gene TRUE TRUE AT5G46360.1 KCO3 (Ca2+ activated outward rectifying K+ channel 3); calcium ion binding / outward rectifier potassium channel Encodes AtKCO3, a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtKCO3 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Identical to Probable calcium-activated outward-rectifying potassium channel 3 (AtKCO3) (KCO3) [Arabidopsis Thaliana] (GB:Q9XFR0); similar to KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2), calcium ion binding / outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G46370.1); similar to putative outward-rectifying potassium channel KCO1 [Oryza sativa (japonica cultivar-group)] (GB:BAD33183.1); contains InterPro domain K+ channel, pore region; (InterPro:IPR001622); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) -0.135414539864878 -1.27745338572275 0.228759936877084 1 0.813160552007165 4.38308332508597 -0.135414539864878 0.114332707415362 AT5G03390_at 1.18007683196161 1.3878936880216 1.02767944377540 1.06904735096493 0.872504077460184 0.966031835349932 1.033153117116 0.723017589539884 0.88259026816985 1.75896017197555 1.89114900874386 2.09467283894215 2.09760410536834 1.64454247173703 2.25713222418352 1.74738691969763 1.34903932928716 1.13500088134267 1.20528006345008 0.178179822729345 0.178441438639511 0.178855310805899 0.176790715927212 0.175942213375622 0.177765271277999 0.181045772228324 0.17851705317605 0.182495703865774 0.179569731242489 0.176047613271493 0.178119811593766 0.176581133043844 0.187681924319143 0.182192115947608 0.176522781765412 0.185699643858576 0.176684719065477 0.183797312708719 5 5|0 +|/ 835807 836567 836183.5 834987 836750 + gene protein_coding_gene TRUE TRUE AT5G03390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68960.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) 0.114099794872045 1.27636744940892 0.229128985899195 1 0.811951038571772 2.56209689524600 0.114099794872045 0.0669859344346513 AT5G38320_at 1.26343228781628 1.04573763538452 1.25218686420031 1.38158291748688 1.00932109633017 1.49381423135596 0.948455321358782 1.37610325349261 1.94260996587842 1.60707798028266 1.15115777968430 1.50149890775566 1.44957988973294 1.13798124644477 1.25814291574096 1.49613225212850 1.53995888693823 1.31228045387364 1.18484607650177 0.201125655311142 0.197212348101601 0.208968986746493 0.194190159653662 0.202568580640706 0.200270438402243 0.201761561574704 0.201704529717064 0.201282737982888 0.212665468097065 0.195439802916142 0.202235958793435 0.195142906274717 0.198811807005842 0.193092961529849 0.192039849844760 0.200183013377875 0.194515802724981 0.195122006954509 5 5 - 15333481 15333965 15333797.727 15333245 15334064 - gene protein_coding_gene TRUE TRUE AT5G38320.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67050.1) -0.138183883550541 -1.27483482816131 0.22965066433013 1 0.810245254510027 2.68833897547402 -0.138183883550541 0.120114230554399 AT5G53990_at 1.81204280256127 1.62974806207035 2.17137118945231 1.78951915957449 1.83076747638756 1.67272714003195 1.83237347746310 1.63889592008819 2.08744913854962 1.90155158861515 1.85734218402708 1.70141394093075 2.11535299628725 1.86571857368135 1.94888246963225 1.54923001292249 2.17039464720374 1.93593671728188 1.93678285624525 0.168104486028015 0.175608756903489 0.178676514745724 0.179002422131106 0.170446643318339 0.170601145040638 0.176044892610375 0.168454708919661 0.175388633738809 0.182339745534330 0.174741361410003 0.169581527981105 0.170438794864974 0.166019473842798 0.167585840934033 0.169027624539494 0.171582580421458 0.177626774717728 0.174122625807710 5 5 - 21933026 21933506 21933268.364 21932776 21934375 - gene protein_coding_gene TRUE TRUE AT5G53990.1 glycosyltransferase family protein similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G64920.1); similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G09500.2); similar to glycosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G64910.1); similar to glucosyltransferase [Ipomoea nil] (GB:BAD95881.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.121101751521350 -1.27449979382318 0.229764833264698 1 0.809872560832477 3.73132822206158 -0.121101751521350 0.0850353108325257 AT5G63135_at 4.40517302755928 4.16373159226966 5.19799284460037 5.23539057650027 5.68340657212255 4.76087773023237 4.7231246446469 4.75171376994126 3.14801082977772 3.85655357388140 4.97718854241654 4.37757904222361 5.07208745894629 5.56629000768117 5.10281727162642 4.7840581504956 4.60277552371235 4.72926857797724 3.70693958003973 0.21983571438711 0.211751837696029 0.218336264118962 0.208298513264861 0.207981284905066 0.214095574848144 0.210449271589588 0.210090103460980 0.239516794960232 0.215490075704075 0.213854699832561 0.209920727447077 0.208809448644484 0.207572682334835 0.212504899604607 0.21148204923565 0.215968377238298 0.21844389812296 0.210019828754529 5 5 - 25342567 25343640 25343315.182 25342205 25343705 - gene protein_coding_gene TRUE TRUE AT5G63135.1 similar to Os02g0593400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047300.1) 0.163976818723019 1.2721179197954 0.230577833618629 1 0.807224966660224 9.10118104462634 0.163976818723019 0.165225915661303 AT5G01440_at 0.983988599241007 0.632880349120116 1.06532111200692 0.880150378516675 0.831309372211153 0.83502662495505 1.0976169661166 0.833563628538707 1.02811694381964 1.14401035841592 0.63987803231783 0.88823071069601 1.04917933798605 0.85105673940715 0.821109575373488 1.11588969623313 1.06783660808192 0.935032603914026 0.98075120362333 0.198680106666937 0.206943406159277 0.197891292890082 0.200875245895575 0.195529185159187 0.195529185159187 0.197280213214509 0.195529185159187 0.199246353189516 0.197329259854222 0.195576486936887 0.202402892696713 0.203868975224886 0.196474912501669 0.195529185159187 0.19654559928769 0.200334453063858 0.1971203966857 0.206484146089902 5 5|0 +|/ 180483 181296 180949.5 179821 181320 + gene protein_coding_gene TRUE TRUE AT5G01440.1 insulin-degrading enzyme-related similar to metalloendopeptidase [Arabidopsis thaliana] (TAIR:AT1G06900.1); similar to PREDICTED: similar to LOC523752 protein [Strongylocentrotus purpuratus] (GB:XP_001185900.1); similar to PREDICTED: similar to LOC523752 protein, partial [Strongylocentrotus purpuratus] (GB:XP_779964.2); similar to Os03g0336300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050040.1); contains domain LuxS/MPP-like metallohydrolase (SSF63411); contains domain INSULINASE -RELATED (PTHR11851:SF16); contains domain METALLOPROTEASE (PTHR11851) -0.119736876804536 -1.27146580023769 0.230800828513727 1 0.80650071310899 1.88097521131536 -0.119736876804536 0.082506102194303 AT5G01870_at 0.983595465694664 0.499397593828701 1.09949897123849 0.849398553017486 0.676418681021895 0.912570967915403 0.753038267715548 0.650881726378791 0.58899257656118 0.729400640141808 1.10279880562982 0.75145393946253 0.690296866000326 0.81638395352385 0.576566244790837 1.11491580961013 1.15157955872743 1.05199241994923 0.774075025428916 0.18928199488649 0.188406099026480 0.187809118363261 0.187809118363261 0.187933356328141 0.195177209706142 0.187809118363261 0.192736509014775 0.205069944994573 0.20385753221755 0.202167886477865 0.193515199875528 0.188416270971522 0.20533457840674 0.199044628585331 0.187809118363261 0.201538251355998 0.198706113911681 0.196735374339071 5 5|0 +|/ 337238 337519 337399.5 337174 337814 + gene protein_coding_gene TRUE TRUE AT5G01870.1 lipid transfer protein, putative similar to LTP6 (Lipid transfer protein 6), lipid binding [Arabidopsis thaliana] (TAIR:AT3G08770.1); similar to lipid-transfer protein [Nicotiana glauca] (GB:AAF28385.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) 0.129668680968272 1.27107799009922 0.230933525013025 1 0.806070131150957 1.60534396022924 0.129668680968272 0.104293494728030 AT5G67190_at 3.15287449187046 3.1558514058865 3.39633292268232 3.89071331953197 3.63077268035317 4.14969532312088 3.01811209941493 3.46968209319074 3.35285614397491 3.11000775358893 4.50866350715408 4.40926018793226 4.65057714393446 4.43431649740668 4.06561013216535 4.36876726535543 4.564421299148 2.95687929920329 3.25546307399484 0.230734708122624 0.226211336587433 0.226490208992463 0.223323126751739 0.227287676462937 0.232777193745997 0.233428253807147 0.235509034871815 0.226485869537184 0.224918887485555 0.223323126751739 0.227201590167529 0.234499086001525 0.23437802453426 0.227201436514041 0.228007658656972 0.232712895630236 0.225924704309785 0.228970635729494 5 5 - 26826424 26826891 26826669.455 26826361 26826915 - gene protein_coding_gene TRUE TRUE AT5G67190.1 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. similar to ATERF#011/CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G50260.1); similar to dehydration responsive element binding protein [Gossypium hirsutum] (GB:AAQ08000.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.152529964455132 1.27022172175467 0.231226733291939 1 0.805119756558923 7.22513141220154 0.152529964455132 0.146598548192212 AT5G38290_at 7.04493638440398 6.68379930926521 7.52847552601576 8.27413544792217 8.76873465514448 8.033329347058 7.5489651126742 7.17536500568118 7.00947735726777 6.96532415810392 8.13285678064804 8.17381599503307 8.01177506410565 8.02620483962456 8.34259204989563 8.56595553422726 8.20976055061912 8.13362350956981 6.79496291349805 0.203362974740977 0.196646462640972 0.20425547062888 0.193043521826796 0.194767144308239 0.190367500163096 0.188936759038545 0.208608357732002 0.213453502867457 0.194520787194590 0.189650827650144 0.192167678297836 0.188936759038545 0.199513168593075 0.197329825504161 0.188936759038545 0.200451111207771 0.198392389041142 0.194268632763011 5 5|0 +|/ 15320974 15322310 15321631.857 15320566 15322778 + gene protein_coding_gene TRUE TRUE AT5G38290.1|AT5G38290.2 peptidyl-tRNA hydrolase family protein similar to peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G16140.2); similar to Peptidyl-tRNA hydrolase [Medicago truncatula] (GB:ABE85649.1); contains InterPro domain Peptidyl-tRNA hydrolase; (InterPro:IPR001328) 0.187355485624066 1.26981735020253 0.231365305830230 1 0.804671102457939 15.1936315235649 0.187355485624066 0.202320568670637 AT5G47435_at 9.64721337783616 9.79870753753073 10.2099007444913 10.1436863907661 10.3863963121830 10.4669805537622 9.44005569578347 9.78988937944714 10.3033926114733 10.2138858961663 10.8533472012760 10.5783927972201 10.5445056783322 10.7485321018213 10.5606540060331 10.6169006088479 10.5721681207295 10.762706925238 10.1487394750375 0.0752530486296255 0.0738808673999035 0.0720186340662959 0.0720625459303662 0.0745969871069721 0.0757396702565876 0.072460424506681 0.0722670453070406 0.0807515440130106 0.0705484942456449 0.0703063469665628 0.0713847196063593 0.0726342110417604 0.0713617753236142 0.0722715616802681 0.0703063469665628 0.0732021268152819 0.0751205078411856 0.0703063469665628 5 5|0 +|/ 19259656 19260358 19259987.9 19258930 19261215 + gene protein_coding_gene TRUE TRUE AT5G47435.1|AT5G47435.2 formyltetrahydrofolate deformylase, putative similar to formyltetrahydrofolate deformylase, putative [Arabidopsis thaliana] (TAIR:AT4G17360.1); similar to formyltetrahydrofolate deformylase, putative [Brassica oleracea] (GB:ABD64983.1); contains InterPro domain Formyltetrahydrofolate deformylase; (InterPro:IPR004810); contains InterPro domain Formyl transferase, N-terminal; (InterPro:IPR002376) -0.114012611206203 -1.26966555093196 0.231417342790524 1 0.804502706059176 20.4236822110565 -0.114012611206203 0.068397597646235 AT5G02310_at 5.63879297123011 6.09918751120238 6.3647154439193 6.48429622752431 6.94333729368149 6.38981817274866 5.11090844402275 5.50893817417696 5.5555705733347 5.47022930594342 6.36529302517779 6.27539380931521 6.66093026857328 6.25937196838024 6.31329622458317 6.48991028437868 6.3441803159311 6.00521976748997 5.58596766046723 0.151348192915331 0.142545800990472 0.146170624018848 0.150642386746392 0.145443860173947 0.151606278790013 0.151009099501375 0.152139942207876 0.157140929585553 0.149102433098216 0.143827854151798 0.142313728264978 0.146012857727190 0.147121337100388 0.147970973464113 0.143847771212347 0.147153581520905 0.148823606125803 0.149589634382618 5 5|0 +|/ 478236 482524 480162.105 474277 482781 + gene protein_coding_gene TRUE TRUE AT5G02310.1 CER3 (ECERIFERUM 3); protein binding / ubiquitin-protein ligase/ zinc ion binding Putative involvement in the release of fatty acids from elongase complexes. similar to MGC115523 protein [Xenopus laevis] (GB:AAI00241.1); similar to Os01g0148000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042017.1); contains InterPro domain Zinc finger, N-recognin; (InterPro:IPR003126); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.150617366248926 -1.26757216897609 0.232135928438920 1 0.802181909542197 12.0057269320935 -0.150617366248926 0.143861808556140 AT5G16760_at 7.27870731185318 7.57991146704535 8.34928563960345 8.13340430332936 8.1893081957111 8.19416741778273 6.99112522801312 7.19571246028905 7.36953131563548 7.16476612573249 8.78567383958254 8.51017744665723 8.33318857582286 8.4320669490481 8.16074133151104 8.63717152193066 8.04858566333632 7.84468198601954 6.95813043331922 0.171599389291364 0.177155807601601 0.184196344896932 0.172466515388110 0.173557191126594 0.173764436976012 0.186312370132734 0.183389973886625 0.193280555667865 0.178444304523964 0.177310875746116 0.178365109061714 0.173813424241509 0.187096171558593 0.172330081462527 0.169192742718927 0.180516018058183 0.173470447339563 0.184098133125492 5 5 + 5510264 5510810 5510600 5509677 5511235 + gene protein_coding_gene TRUE TRUE AT5G16760.1 inositol 1,3,4-trisphosphate 5/6-kinase Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Identical to Inositol-tetrakisphosphate 1-kinase 1 (EC 2.7.1.134) (Inositol- triphosphate 5/6-kinase 1) (EC 2.7.1.159) (Inositol 1,3,4- trisphosphate 5/6-kinase 1) (Ins(1,3,4)P(3) 5/6-kinase 1) (AtItpk-1) (ITPK1) [Arabidopsis Thaliana] (GB:Q9SBA5;GB:O81633); similar to inositol 1,3,4-trisphosphate 5/6-kinase family protein [Arabidopsis thaliana] (TAIR:AT4G08170.2); similar to putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa] (GB:AAL67584.1); similar to Os10g0576100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065485.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Inositol 1, 3, 4-trisphosphate 56-kinase; (InterPro:IPR008656) 0.115639991485515 1.26748905183106 0.232164497110291 1 0.80208981948361 15.4930420225205 0.115639991485515 0.0732592212664717 AT5G46460_at 2.25715987586532 3.14100489500592 2.91014631436594 3.15046527383342 3.08492397027872 2.51105471597513 2.48976937619825 2.4300714146305 2.72773014032386 3.14895418100639 2.82447802449119 2.79893759669116 3.12642719193243 2.80292183165257 2.57491600984102 3.08006405913252 3.32694519180608 2.76829429344850 2.69649321436869 0.212080468660928 0.213656324916148 0.220541736495422 0.219789334395580 0.217373239923738 0.215201427434410 0.219210440673986 0.211811676685033 0.222606992748012 0.213834462195568 0.215160920151050 0.210873206937866 0.216460793141595 0.214812512236441 0.210941330977287 0.218545186984172 0.216366654626911 0.216297201638412 0.220257082135827 5 5 + 18859027 18859565 18859256.727 18857532 18859625 + gene protein_coding_gene TRUE TRUE AT5G46460.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G02750.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE87450.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.177236841379892 -1.26721059117667 0.232260229263836 1 0.801781329077958 5.63212391457286 -0.177236841379892 0.187333171334488 AT5G03940_at 9.67860126621683 9.72704634797625 10.0081991108273 9.89851201897382 10.6377176164002 10.2495941494221 9.79311106128078 9.49099671319656 9.88176356643547 10.0138509894561 10.5688795835433 10.7397731877609 10.1840073645876 10.4251749428830 10.9075111263449 10.3058338355818 10.2624292605396 10.5072108617776 9.92032031902624 0.0766229453770751 0.0788502509553627 0.0761535079727034 0.0742702533122096 0.080040641296022 0.07680996826257 0.0745855301688373 0.0833463981372358 0.0865969918539084 0.0749555732037567 0.0763589530814587 0.0763386572600772 0.0792077874779198 0.0813523915748088 0.0751560638077014 0.0751414020670675 0.0768193501792199 0.0751345521424646 0.0781051516521376 5 5|0 -|/ 1060287 1061182 1060756.667 1060133 1063318 - gene protein_coding_gene TRUE TRUE AT5G03940.1 FFC (FIFTY-FOUR CHLOROPLAST HOMOLOGUE); 7S RNA binding / GTP binding / mRNA binding mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit Identical to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) (FFC) [Arabidopsis Thaliana] (GB:P37107;GB:O82570); similar to signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C) [Arabidopsis thaliana] (TAIR:AT1G48900.1); similar to Signal recognition particle 54 kDa protein, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22369.1); similar to GTP-binding signal recognition particle SRP54, G-domain [Medicago truncatula] (GB:ABD32670.1); similar to signal recognition particle 54 kDa subunit precursor [Pisum sativum] (GB:AAC64109.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897); contains InterPro domain Signal peptide binding (SRP54) M-domain; (InterPro:IPR004125); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Signal recognition particle protein; (InterPro:IPR004780) -0.121454131755102 -1.26648003118119 0.232511541547215 1 0.80097221454944 20.1485960248784 -0.121454131755102 0.0876092699198021 AT5G23140_at 6.53513732707988 6.92429433273318 6.32160536206463 7.21921579301178 7.9677122458712 7.09407367040785 6.9938244062479 6.95879139187726 5.22431573559031 5.64753353832981 6.80969635477841 7.28219211574086 6.85615302811462 6.97384961972624 7.05032012003311 6.9763208288829 5.91570322065915 6.33393474715532 5.28749918846717 0.221505391094984 0.221505391094984 0.234210633238890 0.227222844686493 0.2258157322549 0.249095950819725 0.222659526969600 0.227684533767128 0.250231737420982 0.221956283847706 0.222821746152189 0.223182043884968 0.222081890203498 0.228122348212848 0.235776522191253 0.221598931393098 0.247807722578633 0.221513705361374 0.233039138867861 5 5|0 +|/ 7783945 7784653 7784206.4 7783761 7785500 + gene protein_coding_gene TRUE TRUE AT5G23140.1 CLPP2 (Clp protease proteolytic subunit 2); endopeptidase Clp One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). similar to CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G02560.1); similar to Peptidase S14, ClpP [Medicago truncatula] (GB:ABE89066.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) -0.203167981949385 -1.26520225530385 0.232951627420285 1 0.7995578468911 13.0824421870861 -0.203167981949385 0.227065876628820 AT5G16800_at 8.13063896880031 8.32387252936797 9.0192070281239 8.87494149029786 9.64150618040749 8.96106933628455 7.66989445414888 7.11352347876642 8.17776607552597 7.1450675764734 8.62299023426035 8.2303050755005 8.43461343513806 8.51027137727869 7.89275118717647 8.92433555850109 8.27339052463656 8.75708464508918 7.79764813048181 0.188474220123743 0.188146354059197 0.197415855675360 0.184955866864322 0.187315492636355 0.183008438984223 0.184551594712342 0.185188585808609 0.198552313437663 0.19583998365327 0.181305067665905 0.188354066206813 0.184054185338147 0.204385696261489 0.191309936239788 0.185456237017079 0.185359094287956 0.184596474463001 0.186639237989484 5 5 - 5524556 5525913 5524900.727 5524317 5526592 - gene protein_coding_gene TRUE TRUE AT5G16800.1|AT5G16800.2 GCN5-related N-acetyltransferase (GNAT) family protein similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT3G02980.1); similar to GCN5-related N-acetyltransferase [Medicago truncatula] (GB:ABE94715.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.158504219654658 1.26501146350981 0.233017397147991 1 0.799346747540456 16.548104191037 0.158504219654658 0.157726269571355 AT5G61920_at 2.27789631038264 2.70796662042868 3.10076462810456 3.133084310876 2.70309795325309 2.99150690785625 2.55099223129977 2.31796578348575 2.24230263077386 2.72110821811582 2.71710974084455 2.49554447388274 2.95745827631197 3.01633766210978 2.99778616936946 3.15162841398323 2.95221233732763 2.84309440759204 2.49109192346261 0.183575114262421 0.180189864707603 0.186891491350662 0.184719025349838 0.174366476037218 0.182634538944767 0.186110998799428 0.177267939064253 0.189192862372057 0.176661149015576 0.174366476037218 0.174366476037218 0.179809997812112 0.174737744553367 0.179691331920689 0.175681081805064 0.185158358497476 0.17679606748215 0.181377130385559 5 5 + 24882181 24882814 24882372.727 24882056 24882854 + gene protein_coding_gene TRUE TRUE AT5G61920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14750.1); similar to transglutaminase [Zea mays] (GB:CAD13455.1); similar to transglutaminase [Zea mays] (GB:CAD32336.1) 0.126134109633509 1.26403865963962 0.233352976708714 1 0.79827075466907 5.41102468952506 0.126134109633509 0.0984262885872998 AT5G11360_at 1.94504617208129 2.30900097501455 2.40931911447692 2.18047939904251 1.79076367647905 2.33634701447710 1.86934995365160 2.12592234108085 1.74820399013680 2.33046760837462 2.15888665643395 2.27358539544992 1.99373151489789 1.61165446854550 2.15335331002702 2.14722018311042 1.79457613286855 2.26673459707696 2.15893031432304 0.235822533702845 0.222259052518318 0.227994738419001 0.226342055922881 0.229894543206793 0.237318442647710 0.221369322850032 0.225397156542618 0.221255902567929 0.229971180287875 0.223233834124105 0.229769769076150 0.225123823656354 0.231422670853264 0.251594419326558 0.220938894583834 0.226709420131464 0.223579640002105 0.221464498924809 5 5|0 -|/ 3625946 3626566 3626183 3625571 3626701 - gene protein_coding_gene TRUE TRUE AT5G11360.1|AT5G11360.2 ATP binding / protein kinase similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to Protein kinase [Medicago truncatula] (GB:ABE87464.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719)|similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to Protein kinase [Medicago truncatula] (GB:ABE87464.1); similar to Os03g0159100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049027.1); similar to Putative protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAN06845.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.141296215900122 -1.26364792892953 0.233487874137856 1 0.797838744635531 4.18536279074436 -0.141296215900122 0.128144762197987 AT5G26970_at 0.885701032091025 0.695687253945842 0.95759850782039 1.02413629598222 0.976358306555337 0.953434450050632 1.04285057316801 0.8296443554697 1.08555828520700 1.06024818365116 0.902994916941785 0.709999270169764 0.951284170642377 1.01348193548896 1.15201789487098 0.787671915969408 1.10788456479246 1.08178246101904 1.34000784620658 0.198574764502873 0.193239288582845 0.199213438082771 0.201057302657498 0.2012095661411 0.204190822746402 0.201555812661097 0.193166638705273 0.204231681558189 0.207859502922488 0.196424762025419 0.201573216098295 0.214603342311281 0.203173221659882 0.197118768099146 0.196718128817568 0.199085522070926 0.212975018174456 0.220822886033940 5 5 - 9487077 9487354 9487203.273 9487063 9487389 - gene protein_coding_gene TRUE TRUE AT5G26970.1 unknown protein -0.107532541494848 -1.26077858061363 0.23448044132806 1 0.794669194531261 1.98334022001461 -0.107532541494848 0.0509012892101117 AT5G42920_at 6.89764533090936 7.11693033495063 7.40690267949524 7.63142451427203 8.17711313369946 7.8105851239344 6.4885442756941 6.29175885759828 5.82448917300167 5.949231349989 6.72896454033083 7.00682031724775 6.90049025323343 6.67257182962421 6.70611312030309 7.01131053731544 6.55054258482985 6.58582587980656 6.19753358625196 0.182280434032788 0.186319850427732 0.188316107956706 0.194502074457538 0.193407401784261 0.189941323858838 0.183969626956813 0.190140554677922 0.196485188375989 0.191975130502153 0.186731687839572 0.182737562793099 0.183302511165894 0.191007671594574 0.182928427181732 0.183325487461101 0.207551434284869 0.198938769563718 0.189231889315750 5 5 - 17223540 17224275 17223884.182 17223379 17226763 - gene protein_coding_gene TRUE TRUE AT5G42920.1|AT5G42920.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45233.2); similar to expressed protein-like protein [Glycine max] (GB:ABC47853.1); contains domain FMS INTERACTING PROTEIN (PTHR13375)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45233.2); similar to expressed protein-like protein [Glycine max] (GB:ABC47865.1); similar to cold-induced protein [Ammopiptanthus mongolicus] (GB:ABH01186.1); similar to expressed protein-like protein [Glycine max] (GB:ABC47853.1); contains domain FMS INTERACTING PROTEIN (PTHR13375) -0.122001544358056 -1.26039515145711 0.234613336550093 1 0.794246041262598 13.6079869909445 -0.122001544358056 0.0901817807593138 AT5G57200_at 0.597575005961564 0.852428194452832 1.08885031900230 0.678687104535158 0.137452181517289 0.8894462417506 0.306830446753485 0.727950023106666 0.541176034484047 0.352289133332249 0.354294746826728 0.910214180325118 0.88195811783574 0.66820539494371 0.619721546864572 1.07806960243928 0.477820376591275 0.967117968203137 0.275060088151322 0.216325748425902 0.221299300492037 0.211272258904031 0.225798109665980 0.211272258904031 0.214531360104201 0.214811013616895 0.218240055606236 0.221544104692908 0.223059549273336 0.217930383991517 0.212648365491933 0.211272258904031 0.219477928856332 0.217146756080212 0.212037409496091 0.217630737991390 0.215466949415178 0.215044181670403 5 5 + 23197102 23197802 23197490.545 23194922 23197827 + gene protein_coding_gene TRUE TRUE AT5G57200.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related Identical to Putative clathrin assembly protein At5g57200 [Arabidopsis Thaliana] (GB:Q9LVD8); similar to epsin N-terminal homology (ENTH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G25940.1); similar to Carbamoyl-phosphate synthase L chain, ATP-binding; ANTH [Medicago truncatula] (GB:ABE84582.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain ANTH; (InterPro:IPR011417); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) 0.165887966176963 1.25958334328649 0.234894908210791 1 0.793350432983348 1.22699426983977 0.165887966176963 0.170967215619469 AT5G03000_at 1.05591188125619 0.711421853214236 0.92633480920965 1.48202124906942 0.801426101161989 0.97393080458523 0.819737527898143 1.11818557554347 1.15507140675693 1.42844221132583 0.919404373856628 0.766563076835352 1.15115211539480 0.989308890255666 1.10108219290540 1.14312036913726 1.18212216251098 1.30009385707754 1.39800521428430 0.195123457777387 0.196948890808579 0.194287695905602 0.202344708479928 0.197537114733640 0.197977493081195 0.194949187371217 0.197004504989156 0.198765234210840 0.206895010685337 0.199459333877881 0.196676352764922 0.193956254652461 0.200226328480179 0.198991148182291 0.204661988017153 0.198620719809101 0.197635186263052 0.200136773161919 5 5|0 +|/ 703732 704410 704045.1 703266 704435 + gene protein_coding_gene TRUE TRUE AT5G03000.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE89413.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.140637586533971 -1.25891602546115 0.235126569418423 1 0.792614540713418 2.18426063717682 -0.140637586533971 0.127907172050329 AT5G25440_at 7.9703899262525 8.29796867915816 8.55143935598674 8.52650815174036 8.35166189865186 7.76307353402675 4.73272856495015 4.79209803210358 7.64567548236312 5.98618501806869 7.82640684623889 7.80390093185036 6.34812567347541 7.75331615305577 7.03603646004949 6.79153328607037 6.55173419273332 7.48152127631623 6.58609060454393 0.188864940847793 0.194270095212191 0.188864940847793 0.190454179020690 0.193959277712221 0.209492329538947 0.225559660687604 0.203347707194965 0.197902208507441 0.212315539734671 0.188864940847793 0.193913597800709 0.200345373607982 0.199525774564443 0.197788091655956 0.188864940847793 0.200366211107478 0.203917033331279 0.19102518584372 5 5 - 8855023 8855680 8855478.778 8854782 8856761 - gene protein_coding_gene TRUE TRUE AT5G25440.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G11410.1); similar to Os06g0727400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058637.1); similar to H0409D10.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66747.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.134715250008202 1.25737318035928 0.23566288203495 1 0.790914224129631 14.3424279615916 0.134715250008202 0.117101936656471 AT5G13450_at 10.4824501231634 10.7435502148938 11.2377965196513 11.4145521135339 10.9426731348266 10.9378175762946 10.7069492706277 10.8712038116802 9.88498211925539 10.4099775760072 11.1499872164287 11.3830818922953 11.0983329631736 10.9965531747597 11.3222402205965 11.1558653687570 10.9522370129618 11.1531865653907 10.2086787947005 0.0834682562692627 0.0812784421987495 0.08441725146562 0.081370811580381 0.0812784421987495 0.0832505338731143 0.0812784421987495 0.088115939160221 0.107582751721076 0.0826364028105351 0.0835512461161459 0.0812784421987495 0.0812784421987495 0.0881256829085627 0.0847247588728352 0.0812784421987495 0.0915741335228697 0.0848898324402349 0.0852217020380393 5 5|0 -|/ 4310570 4311342 4311002 4310317 4312051 - gene protein_coding_gene TRUE TRUE AT5G13450.1|AT5G13450.2 ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative Identical to ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) [Arabidopsis Thaliana] (GB:Q96251;GB:Q93W68;GB:Q9LYR1); similar to ATP synthase delta chain, chloroplast, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative [Arabidopsis thaliana] (TAIR:AT4G09650.1); similar to ATP synthase delta chain, mitochondrial precursor (Oligomycin sensitivity conferral protein) (OSCP) (GB:P22778); contains InterPro domain ATPase, F1 complex, OSCP/delta subunit; (InterPro:IPR000711)|Identical to ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) [Arabidopsis Thaliana] (GB:Q96251;GB:Q93W68;GB:Q9LYR1); similar to ATP synthase delta chain, mitochondrial precursor (Oligomycin sensitivity conferral protein) (OSCP) (GB:P22778); contains InterPro domain ATPase, F1 complex, OSCP/delta subunit; (InterPro:IPR000711) 0.110486903432731 1.25697364557884 0.235801927022582 1 0.79047415499899 21.5767816198088 0.110486903432731 0.0615303464809572 AT5G65205_at 3.72322805658866 4.15054346054489 4.65380699823995 4.61245397678585 4.32167612158373 4.51553769738611 3.59516420836057 3.27322239587476 3.70667365357246 3.85088372346921 4.89471170785552 4.49795824257487 4.26064328908574 4.61511106439567 4.86731172292064 4.87479439577848 4.90350865768101 4.67580456534857 3.63684392038745 0.194694261214735 0.194757518474027 0.198553604265876 0.200538922443322 0.198846630939100 0.201132777333927 0.201843329947128 0.193873225617043 0.192190820671191 0.193244074398556 0.192190820671191 0.194934042478609 0.194505797533941 0.201150084288755 0.194116990585811 0.195290760793527 0.201036002422645 0.198381782860106 0.192190820671191 5 5|0 -|/ 26068213 26068951 26068558.3 26068036 26069260 - gene protein_coding_gene TRUE TRUE AT5G65205.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G10050.1); similar to 117M18_6 [Brassica rapa] (GB:AAZ66925.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.125310838707938 1.25432645330490 0.236724876649287 1 0.787560938059446 8.32080289184461 0.125310838707938 0.0987378649251369 AT5G65440_at 6.32478410031399 6.64282502703199 6.34873362306647 6.16982991744848 6.87678931324572 6.46472341015266 5.14694362835209 5.43424988901459 6.6437769544326 6.0510463947564 8.46237909924934 8.36329137029675 6.75080227892342 7.77332961297402 8.52415034427494 7.67528017439837 6.3682096058736 7.78317301573678 6.68216421813784 0.216640604629327 0.209474901954271 0.207696783399588 0.2050265803079 0.201865296732279 0.201865296732279 0.20521968363237 0.207085466893494 0.205273292765277 0.220014656477925 0.211195037712289 0.208011153556450 0.207758844946615 0.206216709832212 0.204013957536873 0.206537303215364 0.201865296732279 0.201956658881492 0.212043145336491 5 5|0 +|/ 26173257 26174056 26173622.3 26168668 26174325 + gene protein_coding_gene TRUE TRUE AT5G65440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48310.1); similar to Os02g0760200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048187.1); similar to Os02g0198400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046207.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19403.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.129440874553992 -1.25372979179850 0.236933307768934 1 0.786904927053452 13.261896260324 -0.129440874553992 0.107447265079801 AT5G23850_at 5.76457169065854 5.89562950628226 6.4938473664453 6.33334916992744 5.42044879033852 5.74595116508042 3.42089406870353 3.18429180606123 3.96971979688531 3.86120226085491 4.44648097817717 4.8399963844291 4.20106850769513 4.31194488752466 4.59162060194021 4.46210949757641 4.26153719183502 4.65147796405399 3.85585006837746 0.251300009128818 0.256165319222785 0.26226967073828 0.25504467564614 0.252163846111170 0.256141236227452 0.251562729377511 0.247659705832522 0.254468869483239 0.246517696253474 0.251350736570760 0.246517696253474 0.249462699138101 0.246517696253474 0.246517696253474 0.249981266861941 0.246560861488037 0.247049331764207 0.2513527522517 5 5 + 8040068 8040629 8040362.909 8038055 8040941 + gene protein_coding_gene TRUE TRUE AT5G23850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48980.1); similar to OSIGBa0159I10.7 [Oryza sativa (indica cultivar-group)] (GB:CAH67462.1); similar to Os02g0642700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047557.1); similar to Lipopolysaccharide-modifying protein [Medicago truncatula] (GB:ABD33425.1); contains InterPro domain Lipopolysaccharide-modifying protein; (InterPro:IPR006598); contains InterPro domain Protein of unknown function DUF821, CAP10-like; (InterPro:IPR008539) 0.116334026641636 1.25341120817654 0.237044659106573 1 0.786554746257948 9.46555805061708 0.116334026641636 0.0783286489214413 AT5G07680_at 1.19015584638892 0.845954003911218 1.23472155725229 1.65309153665846 2.28707043662453 1.70372573504120 0.727691773732716 1.36108598280078 1.47024980842906 1.61381629091363 1.6213582530526 1.05404681994148 1.34850736938431 1.36397121283891 0.89035074327126 1.36618206020313 1.14527144289670 1.81758409641778 1.38654440763006 0.208744538201563 0.20955738526903 0.212135889511912 0.211325953939835 0.222419046357011 0.213974299901793 0.211684311671837 0.215054877234124 0.219919646738391 0.221496770245063 0.207696829288723 0.211007884338923 0.212198996183562 0.214780278293899 0.216872498746868 0.208597440536119 0.211161396975500 0.213732150114811 0.212110685745394 5 5 + 2436647 2437280 2437053.364 2435876 2437500 + gene protein_coding_gene TRUE TRUE AT5G07680.1|AT5G07680.2 ANAC079/ANAC080/ATNAC4 (Arabidopsis NAC domain containing protein 79, Arabidopsis NAC domain containing protein 80); transcription factor similar to ANAC100/ATNAC5 (Arabidopsis NAC domain containing protein 100), transcription factor [Arabidopsis thaliana] (TAIR:AT5G61430.1); similar to NAC5 protein [Glycine max] (GB:AAX85982.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.167871359447850 1.25079940063664 0.237959136750139 1 0.783686319300437 2.78349336008877 0.167871359447850 0.176056021721914 AT5G24610_at 9.3813870749312 9.41464807245977 9.78148450635276 9.75411589212792 10.0715025676628 9.90439763198916 8.89221612357317 8.83764799535036 7.9081516034857 8.0378478287103 8.91744559677905 8.82543067708903 8.95526766101896 8.99920813568268 8.93305157798107 9.04844916819838 8.90201601435836 9.06381228526536 7.88285846509521 0.103475360928802 0.0984218909976714 0.108323448448488 0.100542469500835 0.107884803199394 0.120188079717626 0.102142341731513 0.100554983636502 0.118593331929376 0.106423081826826 0.105218031594013 0.105281445542334 0.105521489959957 0.0985662909698012 0.0997944775845824 0.0984218909976714 0.103638581815928 0.114325493023461 0.108293172038493 5 5 + 8428596 8428966 8428807.182 8428081 8429256 + gene protein_coding_gene TRUE TRUE AT5G24610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49550.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47870.1) 0.102085488305414 1.25036225018322 0.238112475759638 1 0.783206639062634 17.9539438690444 0.102085488305414 0.0313210178107088 AT5G18910_at 1.6266373028713 1.16438473455920 1.53706864798113 1.84212884597635 1.47572688336296 1.78830748598613 1.39086120331033 1.70880746214744 2.08596649352077 1.64986926091285 1.44501206981032 1.35425769633531 1.82126495129073 1.49778159324349 1.53458330651584 1.47841133210174 1.55039205718432 1.68207066495167 1.58807659127091 0.1975773573854 0.197301390132591 0.192004676853810 0.188198534786449 0.188198534786449 0.190260956653531 0.188198534786449 0.191697809483600 0.194430585690852 0.198217427145639 0.188198534786449 0.189925661909021 0.192157495732906 0.193550844673859 0.192388150194565 0.196455929730817 0.191563174790773 0.195977067993917 0.190727052161354 5 5|0 -|/ 6307009 6308060 6307617.667 6306830 6309421 - gene protein_coding_gene TRUE TRUE AT5G18910.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G05140.1); similar to putative receptor protein kinase PERK1 [Oryza sativa (japonica cultivar-group)] (GB:BAD45880.1); similar to Os06g0663900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058295.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.137026032628220 -1.24991051936949 0.238271013105058 1 0.78271108714817 3.22679489952303 -0.137026032628220 0.123043644933828 AT5G06460_at 7.12814700184695 7.22938764906466 8.06372705685909 8.16502873691643 8.09166265659072 7.96785591847592 6.78355821693655 6.8952813126143 6.78224706059691 6.51815373880344 7.7574464326154 7.8906813461647 7.7106245305952 7.80477008761608 7.93527550563169 7.83578075794241 7.60746232663791 7.97837072885302 6.74133691820669 0.154413521850030 0.146919615025557 0.155782117901476 0.144471839633020 0.154551113054472 0.156680459901762 0.148817945317791 0.147987742426743 0.153708287389678 0.152342254673122 0.146002181035841 0.151877387333285 0.150448066996710 0.148578696607272 0.144093985655535 0.145384848924729 0.167787450557377 0.145369700852977 0.152274866860864 5 5 + 1973786 1974359 1974086.636 1970030 1974528 + gene protein_coding_gene TRUE TRUE AT5G06460.1 ATUBA2 (Arabidopsis thaliana ubiquitin activating enzyme 2); ubiquitin activating enzyme Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. similar to ATUBA1 (Arabidopsis thaliana ubiquitin-activating enzyme 1), ubiquitin activating enzyme [Arabidopsis thaliana] (TAIR:AT2G30110.1); similar to ubiquitin activating enzyme 2 [Nicotiana tabacum] (GB:BAD00984.1); similar to ubiquitin activating enzyme 1 [Nicotiana tabacum] (GB:BAD00983.1); similar to Ubiquitin-activating enzyme E1 2 (GB:P31251); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain Ubiquitin-activating enzyme repeat; (InterPro:IPR000127); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain Ubiquitin-activating enzyme, E1; (InterPro:IPR000011) 0.103324801295179 1.24913830363817 0.238542224114813 1 0.781864260506562 14.7883964205178 0.103324801295179 0.0380412797214405 AT5G03250_at 1.62532356550831 1.73672165771287 1.88289217062789 1.66419797294188 1.28560243894269 1.55956810155094 2.01073902091349 1.67635757866566 1.81671075272694 2.15664854963765 2.34718934351537 2.71753001972269 2.08633422146635 2.20259874157844 2.33571182544556 2.00742333970984 2.17251908902902 2.27680400330815 2.11846770687923 0.184422704630905 0.180655593405298 0.182245945501714 0.185280250748189 0.185008204784819 0.188578336312543 0.183862148959308 0.178691003191333 0.180084918555766 0.181869105067638 0.180461352722934 0.182042895933680 0.192605115581262 0.179835977709089 0.187759514649367 0.182879440528696 0.205236097886607 0.187127705292487 0.183772977895259 5 5|0 +|/ 776225 776628 776440.2 774400 777047 + gene protein_coding_gene TRUE TRUE AT5G03250.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G30440.1); similar to BTB/POZ; NPH3 [Medicago truncatula] (GB:ABE93313.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) -0.119068541075363 -1.24868459431820 0.238701688448625 1 0.781366890461389 3.82961172638457 -0.119068541075363 0.0860248485321066 AT5G09380_at 4.03135695418541 3.67145402705262 5.40292735298506 4.48508534765271 5.31187014662855 4.84710733283639 3.98083266948551 3.87334023039895 3.72289640449672 3.93442934214597 4.7185053845004 4.96491416385093 5.31992741366364 4.75754581721502 4.75413189562941 4.70982363930374 4.58968722334734 4.51746582778574 4.06365630097422 0.227982635180654 0.218559074484496 0.223837633841807 0.223475083477198 0.226597898056658 0.231691183010275 0.224653401546692 0.218559074484496 0.224075081901114 0.218642283970178 0.220993765584339 0.220716244206428 0.227056506212939 0.223622681399055 0.221571149558163 0.218559074484496 0.226194963921755 0.227054367985052 0.225649855593278 5 5|0 -|/ 2911350 2912333 2911905.3 2911314 2913137 - gene protein_coding_gene TRUE TRUE AT5G09380.1 DNA-directed RNA polymerase III RPC4 family protein similar to DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT4G25180.1); similar to H0718E12.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66462.1); contains InterPro domain RNA polymerase III RPC4; (InterPro:IPR007811) 0.175880476299632 1.24755315147692 0.239099730051703 1 0.780127137107815 8.79974385092031 0.175880476299632 0.18953421768386 AT5G14340_at 1.47697428661896 1.30396143697700 1.17345171433105 1.45810357155725 1.08273653581573 1.25495355766862 0.948959071985239 1.13570013921260 1.43098734325480 1.19271799878772 1.24366736723222 1.09513058085833 0.952553110828762 1.20617120005913 1.03150869318054 1.20310965906499 1.49595675234380 1.44967812525980 1.27414677776224 0.204971231464439 0.206394224455836 0.205521993840784 0.215018616536814 0.204630865429682 0.203704249344525 0.206329275638104 0.208458288839871 0.208615455684772 0.217131521598218 0.208192484807043 0.203704249344525 0.213118229441550 0.211495871207772 0.203704249344525 0.205532082485477 0.203704249344525 0.209505968041855 0.204435777596498 5 5|0 +|/ 4623657 4624758 4624339.667 4623370 4624850 + gene protein_coding_gene TRUE TRUE AT5G14340.1 AtMYB40 (myb domain protein 40); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB20 (myb domain protein 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G66230.1); similar to myb-related transcription factor [Solanum lycopersicum] (GB:CAA67600.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.113499808727846 -1.24718804642683 0.239228288479073 1 0.779727254771667 2.48385802728999 -0.113499808727846 0.0724954583677962 AT5G62650_at 7.37339793318149 7.48176425392346 8.56645681167995 8.64459986149442 8.76762178371164 8.26710550685694 7.98273487227643 8.05392763637803 6.88735091765315 7.33783316563443 8.48989789803107 8.00945479431033 8.78810691104675 8.22878614940822 8.57795868472808 8.6753513283219 8.3795055311742 8.26278545823966 7.31791190199724 0.205889367579493 0.197634277215401 0.197391405417730 0.192605374074773 0.192065162801247 0.204696226356604 0.192599297779077 0.193264067343764 0.212748316538927 0.200447374381043 0.201656656005236 0.204838129613103 0.197085388397011 0.201134209307878 0.196532999445027 0.191777443991136 0.216384256923259 0.207192721304992 0.206811065169117 5 5 - 25170120 25171115 25170485.182 25169851 25173161 - gene protein_coding_gene TRUE TRUE AT5G62650.1 similar to Os01g0225300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042459.1) 0.120858962714761 1.24718192278073 0.239230445174087 1 0.779720548552744 15.9459575021890 0.120858962714761 0.0904919614116253 AT5G19360_at 2.19948297465785 1.77804490460218 2.39948125792944 1.95994631676092 2.18937154251191 1.89786473579434 2.08849898218231 1.85522014170646 1.91858004374313 1.92931511113199 1.34891449384072 1.67370553248717 1.9921866463527 2.10422029771513 1.96351670154726 1.75219379715186 1.97368979371564 2.25825162247473 2.02231787136209 0.180407149341219 0.183222824810603 0.183381582293403 0.182884180559423 0.181061774877139 0.178933816372344 0.177947470788194 0.183083925117016 0.181039076660385 0.178616690080871 0.180149437350253 0.180492058053069 0.188773782160816 0.185055624193586 0.182521842787398 0.175959040315670 0.181241474431151 0.178343078539921 0.176480954521123 5 5|0 -|/ 6521735 6522614 6522290.556 6521718 6523782 - gene protein_coding_gene TRUE TRUE AT5G19360.1 CPK34 (calcium-dependent protein kinase 34); calcium- and calmodulin-dependent protein kinase/ kinase member of Calcium Dependent Protein Kinase similar to CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), anion channel/ calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G23650.1); similar to CPK17 (calcium-dependent protein kinase 17), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12180.1); similar to CPK21 (calcium-dependent protein kinase 21), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to EPS15 homology (EH); Protein kinase [Medicago truncatula] (GB:ABE77685.1); similar to calcium-dependent protein kinase 17 [Nicotiana plumba (GB:CAG27840.1); similar to calcium-dependent protein kinase 1 [Petunia inflata] (GB:AAZ76712.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.137020380636251 -1.24712428791684 0.239250744443102 1 0.779657431765237 3.96602512505470 -0.137020380636251 0.123609525094522 AT5G14130_at 0.83321277416097 0.81025772292465 0.523553207702015 0.623157033019278 0.649283857945445 1.03785275923026 0.786319374361286 0.750873855723622 0.884200692547354 0.838200208758874 0.48708845095297 0.808719903030372 1.05092243070666 0.738087851898138 0.96943269632277 0.6135014681359 0.853018794228478 1.17015779246858 0.863188375014076 0.190234448168634 0.191507140293439 0.197793677545934 0.195935587541662 0.194720128006683 0.194094552645994 0.192569993056732 0.187739123726935 0.193748383650476 0.191297029192020 0.188209956816017 0.188009744508945 0.189134954761583 0.190516856035740 0.187739123726935 0.189295653296469 0.189247187626274 0.194662691091708 0.187739123726935 5 5 - 4558867 4559345 4559128.545 4558706 4560069 - gene protein_coding_gene TRUE TRUE AT5G14130.1 peroxidase, putative Identical to Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55) (ATP20a) (PER55) [Arabidopsis Thaliana] (GB:Q96509); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT4G37530.1); similar to Os09g0507500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063616.1); similar to peroxidase [Trifolium repens] (GB:CAA09881.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.112470182549121 -1.24683161483422 0.239353846761903 1 0.779336953723501 1.60092845592082 -0.112470182549121 0.0698013433093475 AT5G60900_at 9.68608153725027 9.50864931316425 10.7103596636058 10.5435831187493 9.64838283121094 9.25707309645569 7.18447755216435 6.75472172263615 8.68023894885005 6.28482356681511 7.31791500746724 8.1711912343217 7.00114206971832 7.73247190838656 6.12638259759975 7.67551249195717 7.93816404663686 8.18745253282894 6.84836895391323 0.196082876505090 0.191724713630665 0.194929958474281 0.193771043547980 0.195500672013365 0.198716865542125 0.200858995529052 0.209349804368117 0.201501039207110 0.196440217368645 0.200090099569493 0.190856888292577 0.196731710734442 0.196443197473563 0.206350287012379 0.195295023697151 0.199801026253914 0.195516256897863 0.201353328895860 5 5 - 24515704 24516253 24515998.364 24515693 24518720 - gene protein_coding_gene TRUE TRUE AT5G60900.1 RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); carbohydrate binding / kinase Encodes a receptor-like protein kinase. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G34300.1); similar to receptor-like protein kinase (GB:AAA32857.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.129370435310460 1.24539236273323 0.239861386386930 1 0.777761759596589 16.5566275090583 0.129370435310460 0.109053275675335 AT5G46790_at 5.27401445302595 5.30459080643961 5.35730757549625 5.81366571230458 6.2776764735604 6.13627614448873 5.67427987090217 5.89796061919651 5.63570628545283 5.24154378597863 7.35667147704126 7.06203873668883 7.22122299923636 7.02193669682776 6.51031068209075 7.21217826196829 7.3410640366821 6.20457640319321 5.72662666555097 0.201314691837264 0.188765790363456 0.195883372347618 0.189920761804984 0.188529404145999 0.191853400713601 0.192279150473934 0.190607724279925 0.202502470696339 0.190213230004055 0.195223083372669 0.194893993512674 0.188616095898855 0.195914227166257 0.203616984350697 0.198805113294063 0.196825569835993 0.19756698389243 0.192445518104890 5 5 - 19001344 19001850 19001678.545 19001097 19001986 - gene protein_coding_gene TRUE TRUE AT5G46790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17870.1); similar to Streptomyces cyclase/dehydrase family protein [Brassica oleracea] (GB:ABD65175.1); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) -0.121089671906497 -1.24522392028995 0.239920842935562 1 0.777577493294288 11.9799092022819 -0.121089671906497 0.0914450699666222 AT5G34930_at 4.59185405532603 5.31636779527397 5.27011539366954 5.66305238058666 5.15747842725315 5.54827209647885 3.85069037848650 5.07486138380393 4.94767391364629 4.88364597443276 5.73218197513764 5.69996135044399 5.55948446201058 5.2436848406322 5.5257892541777 5.6473632299722 5.64080276683047 5.96790965586459 4.81988822756442 0.232316373560375 0.227672669780501 0.236222874536961 0.244041236690057 0.235186269069364 0.239394311761221 0.230772945866626 0.228849824502077 0.236381861621066 0.238029824868692 0.235968488775043 0.231292214889721 0.230501771318670 0.234164828774693 0.237571736707975 0.232435410222219 0.234685550889876 0.232063717094686 0.231572384661443 5 5 + 13252215 13252675 13252410.727 13250604 13252797 + gene protein_coding_gene TRUE TRUE AT5G34930.1 arogenate dehydrogenase Identical to Arogenate dehydrogenase 1, chloroplast precursor (EC 1.3.1.78) (TyrAAT1) (TYRATC) (TYRAAT1) [Arabidopsis Thaliana] (GB:Q944B6;GB:O82603); similar to prephenate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G15710.1); similar to Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent [Medicago truncatula] (GB:ABE87267.1); contains InterPro domain NADP oxidoreductase, coenzyme F420-dependent; (InterPro:IPR004455) -0.224965117305812 -1.24441425413534 0.240206803803553 1 0.776692017169224 10.3145281040756 -0.224965117305812 0.264192414975362 AT5G25860_at 0.68615085314684 0.901825974316807 0.740024284366621 1.26292798185344 1.37606327340025 1.45615584965590 1.02683033578655 1.05232882184229 0.81836843622911 0.890173400582782 0.63642003261078 1.03642273386196 0.625899420667289 1.08729839197388 1.01243011848083 0.841072542016324 0.754859143392916 1.42180768393069 0.815727677491026 0.198052750255312 0.205667681875523 0.208594959191319 0.204212904676762 0.208340003734870 0.199463189599847 0.200308225985049 0.216932533063805 0.203486458470455 0.210468313577051 0.201861234255735 0.198052750255312 0.205025572998195 0.213884952087744 0.204281448932818 0.201998097839929 0.202082990249068 0.211164060055304 0.200360186531429 5 5|0 -|/ 9016941 9017654 9017388.111 9016911 9018427 - gene protein_coding_gene TRUE TRUE AT5G25860.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G40050.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G60040.1); similar to Cyclin-like F-box; FBD; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABD28647.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.124332570004469 1.24349675089771 0.240531183625889 1 0.775689111298307 1.94701313669666 0.124332570004469 0.098960795918182 AT5G53620_at 7.06293592871159 7.25743996958512 7.56272501042661 7.62556432530051 8.01218461576163 7.74920724854258 7.11097780510521 7.10067335630154 6.46653330800168 6.53114919115504 7.72270342493343 7.93356358917194 7.46593847094673 7.59842389761512 7.71827470968497 7.65987876058263 7.64737649429259 7.55792807127906 6.37853381115519 0.204187063840790 0.199777492576187 0.217520912801703 0.216693292231673 0.199777492576187 0.234559993572358 0.212035547352551 0.203443364826427 0.220174849307560 0.205776222585505 0.205479226469849 0.200217335708747 0.205579441062322 0.219228764306283 0.202700502788123 0.200810004773765 0.218949776498417 0.206365034233956 0.208466067890557 5 5|0 +|/ 21801435 21802183 21801763.2 21798173 21802456 + gene protein_coding_gene TRUE TRUE AT5G53620.1|AT5G53620.2|AT5G53620.3 similar to intracellular protein transport protein USO1-related [Arabidopsis thaliana] (TAIR:AT2G46180.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71275.1) -0.108056546839359 -1.24341081967785 0.240561582392903 1 0.775595208916255 14.4960883811755 -0.108056546839359 0.0576674329841881 AT5G05460_at 6.80077042474378 6.99151565326003 7.648112350028 7.31702303204632 7.40831243978404 7.06221052785662 4.01663877288379 3.46078728986796 6.11215852872535 4.31538515487941 5.19026837959176 5.7425190562694 5.30437720030141 5.90172383449756 4.55633060123101 5.54973791516326 4.98877038568792 6.03799280295801 5.00145583216009 0.278006616423698 0.268809079948736 0.273227809209526 0.274293763391338 0.272766133821127 0.278916718835491 0.280457988870991 0.276531479879972 0.276352563281428 0.280396052607241 0.272129879346516 0.271692041919992 0.268809079948736 0.271697869505523 0.278573331099036 0.268809079948736 0.281298681564979 0.270014766541075 0.272860770019793 5 5 + 1618230 1618703 1618418.3 1615616 1618903 + gene protein_coding_gene TRUE TRUE AT5G05460.1 hydrolase, acting on glycosyl bonds similar to glycosyl hydrolase family 85 protein [Arabidopsis thaliana] (TAIR:AT3G11040.1); similar to Os05g0346500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055263.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV43808.1); contains InterPro domain Glycoside hydrolase, family 85; (InterPro:IPR005201) 0.140651584768906 1.24308989086049 0.240675140622175 1 0.775244551642661 11.6141537415842 0.140651584768906 0.131197953548502 AT5G48300_at 10.9546343477892 10.8403381418721 11.2861711934851 11.1355786961180 11.2579695254467 10.8659333181584 11.4117855349460 11.1686143364421 10.7971389139800 11.0242315106736 11.4787993696329 11.6181435120652 11.3668122674937 11.6140480489605 11.8297569464719 11.7495943214922 11.5949050062836 11.7761921567085 10.5017150459600 0.0843519375816806 0.0800682013511279 0.0858181520877976 0.0873237950376037 0.0828656262753143 0.0846088267982562 0.0816915384793158 0.0811964227131717 0.089784608562087 0.082363103119456 0.0800682013511279 0.0805666480128437 0.0800682013511279 0.0826786448788654 0.0821466759341462 0.0807459199884767 0.0847533104158138 0.0800682013511279 0.083653395903105 5 5|0 +|/ 19588699 19589744 19589270.333 19587466 19590030 + gene protein_coding_gene TRUE TRUE AT5G48300.1 ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1); glucose-1-phosphate adenylyltransferase Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested. Identical to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (APS1) [Arabidopsis Thaliana] (GB:P55228;GB:O64400;GB:Q96534); similar to ADG2 (ADPG PYROPHOSPHORYLASE 2), glucose-1-phosphate adenylyltransferase [Arabidopsis thaliana] (TAIR:AT5G19220.1); similar to Glucose-1-phosphate adenylyltransferase small subunit, chloroplast precursor (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (GB:Q9M462); similar to ADP-glucose pyrophosphorylase small subunit-like [Solanum tuberosum] (GB:ABA81851.1); similar to ADP-glucose pyrophosphorylase small subunit CagpS1 [Cicer arietinum] (GB:AAK27720.1); contains InterPro domain Glucose-1-phosphate adenylyltransferase; (InterPro:IPR011831); contains InterPro domain ADP-glucose pyrophosphorylase; (InterPro:IPR005836); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835) -0.118568570928492 -1.24231149085587 0.240950751348094 1 0.774394319045031 22.3165747753704 -0.118568570928492 0.0862788740830537 AT5G58330_at 11.2083983812071 11.3038288823483 12.0342023523602 12.0151083153799 11.9720946366790 11.8075271306342 12.019525509593 12.0032890400647 11.7602558375881 11.9900266010800 12.2285058702238 12.2770195559007 12.2851751049955 12.2878840126363 12.2996926022299 12.4477186999661 12.3965135371559 12.3324356204222 11.7505552355292 0.0644743656104563 0.062121367499019 0.0671083589724672 0.0654780871408515 0.0626114924422814 0.0691982897187715 0.061501743524476 0.0620828320227534 0.0670312629117664 0.0617355213700757 0.0625653602678573 0.0625364392276593 0.0621067050267204 0.0633056871085485 0.0650686476466865 0.0621407788874469 0.0673386776781382 0.0670944078690475 0.0653887677985 5 0|5 /|- 23597247 23598192 23597650.625 23596948 23599621 - gene protein_coding_gene TRUE TRUE AT5G58330.1|AT5G58330.2|AT5G58330.3 malate dehydrogenase (NADP), chloroplast, putative similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G56720.1); similar to malate dehydrogenase [Solanum lycopersicum] (GB:CAH60894.1); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:P21528); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:O48902); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants; (InterPro:IPR011273); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants and bacteria; (InterPro:IPR013001)|similar to malate dehydrogenase, cytosolic, putative [Arabidopsis thaliana] (TAIR:AT5G56720.1); similar to Malate dehydrogenase [NADP], chloroplast precursor (NADP-MDH) (GB:O48902); contains InterPro domain Malate dehydrogenase; (InterPro:IPR008267); contains InterPro domain Malate dehydrogenase, NAD or NADP; (InterPro:IPR010945); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants; (InterPro:IPR011273); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NADP-dependent, plants and bacteria; (InterPro:IPR013001) -0.101757763407609 -1.24207251599663 0.241035417079824 1 0.774133368494831 23.8719871227868 -0.101757763407609 0.0332056005459649 AT5G38370_at 1.01568824602582 1.02263341721216 1.17345362213426 1.49231529539067 1.38112368103258 1.21206275528703 1.55847675283390 1.33782709792251 1.69173815719288 1.2974892326293 1.3072183987108 1.2616351776411 1.25656461451187 1.42166057558909 1.43450887007227 1.35483146261447 1.39055200470102 1.72032119668287 1.56327635009294 0.208428638536813 0.210307875894577 0.210525695905230 0.213827880776819 0.204322437413908 0.217446769474849 0.207931090257652 0.213406950906472 0.213406242515544 0.209433374299112 0.204796736638595 0.208263228287458 0.216662699857562 0.204499201972054 0.207293643121376 0.205038312430789 0.210785678344151 0.239198153363127 0.208069691441948 5 5 - 15357623 15357857 15357740.727 15357623 15357925 - gene protein_coding_gene TRUE TRUE AT5G38370.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80220.1) -0.113237702185555 -1.24134361479577 0.24129380575007 1 0.773337663780134 2.72965400058177 -0.113237702185555 0.0732143683310331 AT5G10680_at 1.35870235306647 1.60475567838595 1.97762319873829 1.99366070934251 1.70886690050801 2.17712352084467 2.26680410992772 2.29103589099844 2.26268875435821 2.07326152258592 1.93046065136015 1.90059270381164 2.43283132495485 2.38537164914019 2.33532817701690 1.89584599833030 2.37912960716282 2.47660801458529 2.21562131795678 0.177001038955931 0.177314652643093 0.187110899144512 0.182144630926157 0.174326967639311 0.186535848833297 0.179378599431433 0.179375798749651 0.178820696543043 0.175653728815094 0.17701396629514 0.177531947835650 0.188967307280309 0.176119696210207 0.175945862535352 0.180811990908365 0.183789791423308 0.177421783240365 0.181103231426448 5 5 + 3373726 3374184 3373880.727 3373585 3374310 + gene protein_coding_gene TRUE TRUE AT5G10680.1 calmodulin-binding protein-related similar to AHK5 (CYTOKININ INDEPENDENT 2) [Arabidopsis thaliana] (TAIR:AT5G10720.1); similar to Os06g0654300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058244.1); similar to putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD37425.1) -0.120666036638005 -1.23980950387014 0.241838363947146 1 0.771664059654592 4.12276065227429 -0.120666036638005 0.0916782920709586 AT5G66330_at 1.61745889590595 1.42634710884538 0.861253356374181 0.99564476837313 1.20824205938827 0.749798060471405 1.34645745543537 1.38827541750383 2.29043140031188 1.73084010267751 3.45208129140187 3.86288384238254 3.04116979026777 2.73249828457849 4.00071766629280 2.71179307100060 1.5439298690925 3.16558313966487 2.07999583811784 0.212393520546722 0.214878789028153 0.213919900406717 0.219119076802710 0.223211012118009 0.219749558896717 0.212393520546722 0.214250840779913 0.227123032600268 0.214278040820262 0.217650735391526 0.228456729173677 0.215899710400713 0.212393520546722 0.221582740148764 0.218613712356180 0.225822554621963 0.212628183469420 0.225687204819366 5 5 - 26517814 26518226 26518040.455 26517628 26519181 - gene protein_coding_gene TRUE TRUE AT5G66330.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G15320.1); similar to Os02g0647300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047577.1); similar to Hcr2-p3 [Lycopersicon pimpinellifolium] (GB:AAX19025.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) 0.119536972543717 1.23872555575284 0.242223726631261 1 0.77048245664829 3.74797859013932 0.119536972543717 0.0893378521571247 AT5G41950_at 7.78995084814856 7.71511702337932 8.08360414975898 8.50241617116704 8.35656138702158 8.05334229431386 7.06076041816805 7.31337715539763 6.84968153815002 6.25614717035279 7.81809833536037 7.83333146595917 7.73601537924139 8.04240198324092 8.12314565297497 7.83215655280308 7.76914195611413 7.69762223014196 6.16185786166731 0.192024771547661 0.192316798326251 0.193944623713767 0.193771031890488 0.191801197851394 0.197696953785397 0.194643384418208 0.193151107468856 0.211586209643395 0.213848132552579 0.191801061073661 0.188764414026995 0.1967969991239 0.201003706990163 0.192219348297871 0.188764414026995 0.200314654057177 0.195359929396850 0.218075807897775 5 5|0 +|/ 16805622 16806304 16805855.125 16802942 16806742 + gene protein_coding_gene TRUE TRUE AT5G41950.1 binding similar to Os10g0518300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065074.1); similar to Os03g0113800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048738.1); similar to unknown [Vitis vinifera] (GB:AAP30737.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.124434861097667 1.23770435022458 0.24258723599358 1 0.76936993582132 14.9989168731875 0.124434861097667 0.100425493399750 AT5G44900_at 0.594882940048372 1.19023178331441 0.695106530885221 1.31480612302318 0.99822343073149 0.688440983136844 1.12612762088540 1.02281319499418 0.748934840840775 1.30124591314525 0.655658077137499 0.628148718631859 0.652310337952759 0.798833902035208 0.284181444276548 0.656747671030869 0.963074581308623 1.16938031987191 0.527900385813421 0.219074821767284 0.222510972506351 0.224621480727740 0.220083473138691 0.227923871829922 0.219244081910535 0.221574053681250 0.219779522562044 0.225692760958223 0.229097519643267 0.236624348082279 0.220628995528474 0.219074821767284 0.219074821767284 0.22064279516436 0.222536286748756 0.225882631814454 0.219074821767284 0.225349359619364 5 5 + 18153026 18153554 18153279.889 18152673 18153665 + gene protein_coding_gene TRUE TRUE AT5G44900.1 transmembrane receptor similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45000.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) -0.155826547114959 -1.23722848815399 0.242756774457578 1 0.768851750387667 1.74653020660929 -0.155826547114959 0.159088623008423 AT5G15170_at 4.08210090213048 4.17114128112906 4.2691106161189 4.14952162833147 5.704402136562 4.6558369839032 4.22775093161266 3.8019209190542 4.8158372680638 4.29359943957693 5.2949328824274 5.5354529064097 5.86601004149564 5.87188661664135 5.14155956788759 6.19954175782016 5.42805300829828 5.25452979805183 5.19289852373902 0.260930254466018 0.251772186487377 0.257494595713465 0.262102402132444 0.259866798105031 0.27232390999175 0.251515861408112 0.254459493121207 0.259808602119537 0.257125327541150 0.256260898720419 0.258641819559587 0.252729674557296 0.268014512000254 0.263929463937268 0.252457622290070 0.275854672834733 0.261189421690327 0.260109307907024 5 5|0 -|/ 4926486 4927217 4926752 4926097 4929505 - gene protein_coding_gene TRUE TRUE AT5G15170.1 tyrosyl-DNA phosphodiesterase-related similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07400.1); similar to Os07g0530100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059844.1); similar to Forkhead-associated; Tyrosyl-DNA phosphodiesterase [Medicago truncatula] (GB:ABE78603.1); contains InterPro domain SMAD/FHA; (InterPro:IPR008984); contains InterPro domain Tyrosyl-DNA phosphodiesterase; (InterPro:IPR010347) -0.179248289744735 -1.2355330029669 0.243361612190589 1 0.767006646249207 9.55344362460803 -0.179248289744735 0.197543986607971 AT5G19560_at 2.40626172144060 2.14041159845654 2.23692494551051 2.94078731056062 1.89412635282405 2.69610003991697 1.86833879447386 2.48976135324147 2.60099617741458 2.67812161415998 2.52227818076951 2.28243778351029 2.44922841371672 2.59423386574887 2.67450938821580 2.34098951073453 2.33847368442618 2.48658877668291 2.35849734692687 0.198949066529405 0.197187982382693 0.195368069958790 0.198609634097972 0.201415320535355 0.193024387634292 0.195193679202489 0.191681276671956 0.197090750311735 0.209210697183189 0.198396244633555 0.196429837214757 0.202709738914685 0.200370855151124 0.199537984959988 0.197617278133654 0.194260429501201 0.197435250883423 0.191135437170434 5 5 + 6605494 6606105 6605741.273 6603293 6606132 + gene protein_coding_gene TRUE TRUE AT5G19560.1 ATROPGEF10/ROPGEF10 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. similar to ATROPGEF8/ROPGEF8 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT3G24620.1); similar to pollen-specific kinase partner protein [Lycopersicon esculentum] (GB:AAW57535.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Protein of unknown function DUF315; (InterPro:IPR005512) -0.192813679310097 -1.23543458830768 0.243396757316617 1 0.766899603470426 4.83757109620778 -0.192813679310097 0.218585667701616 AT5G58090_at 5.50078584129876 5.8456302912409 5.59817968896507 5.86005568926812 6.55298013435087 6.49757767341755 5.0025368454576 5.72481054578218 5.16533606321181 5.38500772866197 6.31853299480422 6.89186896228535 6.6328170752418 6.59167193707068 7.16863346818115 6.61954664635726 6.10414870709452 5.3547589599687 5.43726513938457 0.193242130890512 0.19375843414378 0.203280601006086 0.195952168827959 0.193579736039771 0.194582278259059 0.199992311359132 0.196991878594352 0.210068330912422 0.191101688124428 0.195098167591762 0.193710459036067 0.197395682584342 0.191101688124428 0.19401754371258 0.192611928037851 0.197027161397238 0.203178034330692 0.192240284115547 5 5 - 23523007 23523285 23523137.455 23522592 23524514 - gene protein_coding_gene TRUE TRUE AT5G58090.1 glycosyl hydrolase family 17 protein Identical to Putative glucan endo-1,3-beta-glucosidase 6 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase 6) ((1->3)-beta-glucanase 6) (Beta- 1,3-endoglucanase 6) (Beta-1,3-glucanase 6) [Arabidopsis Thaliana] (GB:Q93Z08;GB:Q9FGT5); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G31140.1); similar to Os02g0139300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045844.1); similar to Os08g0224500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061277.1); similar to putative 1,3-beta-glucanase [Oryza sativa (japonica cultivar-group)] (GB:AAP12947.1); contains InterPro domain X8; (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.147869911677918 -1.23401924118004 0.243902647989668 1 0.765360857936253 11.7175447492034 -0.147869911677918 0.146048854269688 AT5G42690_at 1.16185189757593 0.828970674510328 1.37353144609270 1.17836521627309 1.59977385973082 1.41018591551189 1.07982152034784 1.31574757758479 1.25909661735905 1.9777205296582 1.62210069779893 1.46229242985471 1.55423607561855 1.36450943183706 1.89462120035258 1.54443858348368 1.56599253892554 1.94946025122619 1.23155514048692 0.187931123641810 0.197755369254418 0.187931123641810 0.189244750621139 0.192731943358873 0.187931123641810 0.196076955549960 0.194570761329499 0.195043102753797 0.193557126029927 0.197952361949804 0.187931123641810 0.188218061514089 0.187931123641810 0.193915158673515 0.200938639126073 0.205123488231511 0.190927701509213 0.201386902046274 5 5|0 -|/ 17133880 17134814 17134294.667 17133656 17137066 - gene protein_coding_gene TRUE TRUE AT5G42690.1|AT5G42690.2|AT5G42690.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37080.2); similar to At3g12540-like protein [Boechera stricta] (GB:ABB89771.1); similar to Os09g0463300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063405.1); contains InterPro domain Protein of unknown function DUF547; (InterPro:IPR006869)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37080.1); similar to At3g12540-like protein [Boechera stricta] (GB:ABB89771.1); similar to Os09g0463300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063405.1); contains InterPro domain Protein of unknown function DUF547; (InterPro:IPR006869) 0.117174210802174 1.23389932079927 0.243945550270636 1 0.765230541207139 2.79811292860603 0.117174210802174 0.0848681771710619 AT5G14470_at 2.29881901674573 1.88407936932532 1.92722877195579 2.11085702238434 2.05137494858898 2.18085483661908 1.86450242687568 2.15424106792790 2.48730008189144 2.17889920353471 2.40877728827116 2.28378780992117 2.25174405477224 2.3613310617838 2.53455269333970 2.18496248234866 2.63236277037352 2.39950448121498 2.04126715302294 0.198958057501303 0.196565904634288 0.197869593264574 0.200716771293274 0.198706550035654 0.204691312462838 0.202433063949530 0.201793253839187 0.197668074669297 0.198090795903483 0.198110231358729 0.193659105825592 0.198013657780221 0.194311217911534 0.191625224548694 0.191625224548694 0.191698576011992 0.196702054024332 0.195225964982261 5 5|0 -|/ 4663054 4663822 4663336.5 4662806 4664650 - gene protein_coding_gene TRUE TRUE AT5G14470.1 GHMP kinase-related similar to GHMP kinase family protein [Arabidopsis thaliana] (TAIR:AT3G01640.1); similar to Os11g0217300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067512.1); similar to GHMP kinases putative ATP-binding protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92069.1); contains InterPro domain GHMP kinase, C terminal; (InterPro:IPR013750); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase; (InterPro:IPR006204) -0.121924019815982 -1.23386193911398 0.243958925048842 1 0.765189920649065 4.36796967075428 -0.121924019815982 0.0957981963222448 AT5G41280_at 1.13288502719955 1.12648466764738 0.82846039587156 1.18539913396045 1.11689395341785 0.330041356519331 1.05125468834197 1.3150792034729 1.09537661111484 0.825194705839879 0.804054232745528 1.46461230461191 1.47472878123655 1.26936572679913 0.724386160323217 1.25565270618809 0.64866698147416 1.19474660272659 1.03678893464694 0.220582961151163 0.214731715398853 0.215753774169959 0.216023179321893 0.21365213934096 0.226848241543607 0.213973141463387 0.21365213934096 0.226083199095231 0.217810985891789 0.221833647953190 0.21851667783313 0.220980266844943 0.221742239945034 0.226598050378316 0.213986167312914 0.215878655464204 0.220840618914292 0.21365213934096 5 5 + 16527102 16527917 16527340.545 16526737 16528155 + gene protein_coding_gene TRUE TRUE AT5G41280.1 Identical to DUF26 domain-containing protein 1 precursor [Arabidopsis Thaliana] (GB:Q9FHD5;GB:Q5BPI3); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G41290.1); similar to receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] (GB:AAD21872.1); contains InterPro domain Protein of unknown function DUF26; (InterPro:IPR002902) -0.153765966260106 -1.23366619263298 0.244028970742469 1 0.764977228683275 2.05596902207739 -0.153765966260106 0.156342855999512 AT5G66200_at 7.77338706788888 8.21551583522119 8.71934191909881 8.88231524410736 9.11980538386125 8.9098522022686 8.36164751165578 8.18767631167766 8.69525899657063 7.98924618231906 9.45435014959907 8.73040104967927 9.27584924577828 9.28375168307826 8.67270441530214 8.58586732673353 8.1750506489214 8.95577552176205 8.02091367506543 0.138220055813883 0.132690014464258 0.135309494755173 0.137684715024797 0.136153049583602 0.131479065527389 0.135058120258208 0.138416257691185 0.141190891844717 0.135743261290718 0.135319681790522 0.139004166400020 0.131705466748454 0.138545746750267 0.131334028489482 0.142091527876148 0.163057417709673 0.140807444219483 0.146610176669581 5 5 - 26471031 26471417 26471198.636 26470686 26473048 - gene protein_coding_gene TRUE TRUE AT5G66200.1 armadillo/beta-catenin repeat family protein similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G36030.1); similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G34940.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE92291.1); similar to Armadillo [Medicago truncatula] (GB:ABE77933.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD34223.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.121178392817889 -1.23352957799804 0.244077866355896 1 0.764828802085876 17.0846218710183 -0.121178392817889 0.0942130424221092 AT5G11600_at 5.55528911470498 6.11783286470586 6.72323915688303 6.96854698288181 7.1447161562938 6.79164918048416 5.6383748207953 5.47204989244766 6.05546885501605 6.2591618290998 7.19531680487801 6.53014896478207 6.71423658332753 7.04820640727473 6.24615731292461 6.63812603510654 6.30362818906912 6.65094631385253 5.86629751349528 0.184989411360895 0.191498460853583 0.189771767784154 0.181679485410150 0.193787688802459 0.185949023973677 0.190922287689581 0.184815111742778 0.195152700516377 0.185503992322361 0.180993060793942 0.184293127106324 0.182627291539708 0.186751103839914 0.186616472249873 0.185780064493039 0.187929368117725 0.187420146099215 0.185958710393726 5 5|0 -|/ 3733830 3734851 3734285.778 3733655 3735100 - gene protein_coding_gene TRUE TRUE AT5G11600.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19990.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV59389.1) -0.136703653109577 -1.23344030285417 0.244109822997396 1 0.764731814512208 12.6645398839524 -0.136703653109577 0.125861036760940 AT5G08080_at 7.28798182945833 7.4324926830417 8.06954952730357 8.06887401581667 8.40451435801674 8.11274932950048 7.55556235712065 7.61687754310872 7.79372570167538 7.97544622301734 8.95440760000107 8.9683960274391 8.73068359595154 8.99303167283377 8.76831657451349 8.80159680907699 8.63160910755765 8.69278303130612 7.98496581004424 0.152809342664707 0.139661307066128 0.143319093016004 0.145366887090551 0.136148270736661 0.14863545203485 0.140917740065421 0.136758355085138 0.147222967265517 0.133651707068693 0.138563105118049 0.147404563313697 0.137010814930445 0.141772409462494 0.143805863785585 0.138420858443969 0.146993642106343 0.141484745760211 0.138471436375519 5 0|5 /|+ 2590367 2591067 2590813.125 2588343 2591317 + gene protein_coding_gene TRUE TRUE AT5G08080.1|AT5G08080.2 SYP132 (syntaxin 132); t-SNARE member of SYP13 Gene Family Identical to Syntaxin-132 (AtSYP132) (SYP132) [Arabidopsis Thaliana] (GB:Q8VZU2;GB:Q9LEZ8); similar to SYP131 (syntaxin 131), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G03800.1); similar to syntaxin [Nicotiana benthamiana] (GB:ABI93942.1); similar to Os07g0164300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058959.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012)|Identical to Syntaxin-132 (AtSYP132) (SYP132) [Arabidopsis Thaliana] (GB:Q8VZU2;GB:Q9LEZ8); similar to SYP131 (syntaxin 131), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G03800.1); similar to syntaxin [Nicotiana benthamiana] (GB:ABI93942.1); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989) -0.107030737733675 -1.23278426027028 0.244344761185811 1 0.764019253679164 16.1863996873778 -0.107030737733675 0.0573357620616175 AT5G26660_at 1.50544598220836 1.41171087623645 2.28212735153295 2.12636007671523 1.99498745444188 1.53181106407737 1.7897991815251 1.36913045049603 1.96531565961741 1.82079726181038 1.43193043062049 1.68502595008609 2.20509651787376 1.75975736957434 2.05497212278717 1.4907033218437 1.75772501804145 2.15517152794294 1.46883182694528 0.190859971035401 0.193167284278849 0.20114662828756 0.18920032080015 0.199459015416001 0.202481294551068 0.198341135067251 0.194537394733241 0.191388996169078 0.192800540233279 0.191159464315265 0.191658395198467 0.193775540345278 0.198730080894448 0.191448911227403 0.194730520878449 0.197976280248385 0.192947646541385 0.202668241621282 5 5 - 9331867 9332333 9332151.091 9331576 9333174 - gene protein_coding_gene TRUE TRUE AT5G26660.1 ATMYB4 (myb domain protein 4); transcriptional repressor a MYB gene encodes a transcriptional repressor of the C4H gene which is involved in the biosynthesis of sinapate esters. Identical to Transcription factor MYB86 (Myb-related protein 86) (AtMYB86) (Myb homolog 4) (AtMyb4) (MYB86) [Arabidopsis Thaliana] (GB:Q8LPH6;GB:O22685;GB:O65249;GB:Q9SBF4); similar to AtMYB50 (myb domain protein 50), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G57560.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE81808.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.129728678481376 1.23124700418830 0.244895987156404 1 0.762350645120207 3.53601957055614 0.129728678481376 0.112757333398601 AT5G57345_at 11.1347553883854 11.3303981979442 11.9744891366484 11.8440780104626 11.7733828127145 11.5631993201577 12.3229151319538 12.1298801459172 11.3175703897628 11.7311746172529 12.4333227225644 12.5181958173939 12.1151181701871 12.1326608391546 12.4851002265136 12.1232361965987 12.2200657453834 12.191345580395 11.5292873050928 0.0747889670116656 0.0741081463665825 0.0783166521563764 0.0741081463665825 0.0764431197982415 0.0800580793656348 0.0756231564547547 0.0745359726603999 0.0854177697832914 0.0762188140376298 0.0772204136099281 0.0743056457938426 0.0758886921467044 0.0807133327271793 0.0775834609686599 0.0741081463665825 0.075425201768238 0.0773125354839589 0.0755238421845153 5 5|0 -|/ 23246830 23247711 23247301.2 23246633 23247864 - gene protein_coding_gene TRUE TRUE AT5G57345.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54520.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83998.1); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) -0.108970970523045 -1.23047297580467 0.245173914947912 1 0.761511053891501 23.6608329845113 -0.108970970523045 0.0639887672666345 AT5G51800_at 1.27400686993319 1.28274759245819 1.45316243220940 1.58999786838875 1.56213682952997 1.39525485072505 1.45267531620606 1.24311196409294 1.50946082493328 1.50963057407994 1.64145583428663 1.36948901257813 1.67911828026397 1.83654036300482 1.81683122603835 1.73866887113158 1.82691280175766 1.84404501363355 1.43668796451081 0.162878730752691 0.161329078176503 0.167509934579942 0.160423893737600 0.17232677159257 0.171771683579697 0.169312568725846 0.161134191944106 0.167383880933078 0.161006914567618 0.169150211449922 0.163194930829233 0.174405349663109 0.164171860023085 0.165636436071615 0.171270156192158 0.159651762685794 0.170982110441985 0.171892201085877 5 5 + 21068574 21069104 21068801.455 21065417 21069238 + gene protein_coding_gene TRUE TRUE AT5G51800.1 similar to gt-2-related [Arabidopsis thaliana] (TAIR:AT2G33550.1); similar to CRN-like CRN8 [Phytophthora infestans] (GB:AAY43402.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009) 0.105172443303339 1.22923762199972 0.245618014665803 1 0.760171859711497 3.00883294703203 0.105172443303339 0.0520796014721924 AT5G20860_at 1.56557271347397 1.54693642823762 1.49746428240539 1.93917250715160 1.61162823059989 1.49250341044734 1.44090074020949 1.61618186715165 2.22843050150811 2.08578732811325 1.80888552703314 1.73485046982516 1.69581859667378 2.2607482758471 2.00873383487463 1.84925380242593 2.11011256077300 2.36989339138337 1.76701084865521 0.225260884909539 0.229589877238619 0.231377120386754 0.239714159454969 0.231980575732276 0.228528114651518 0.227912811259088 0.232538356945639 0.231505108230988 0.229125348770045 0.223918412250118 0.228893333277229 0.230835577303898 0.23622533297394 0.232005713975462 0.229767686207846 0.234737751138437 0.225265065590519 0.227834571723522 5 5 - 7077167 7077536 7077350.091 7076892 7079079 - gene protein_coding_gene TRUE TRUE AT5G20860.1 pectinesterase family protein similar to pectin methylesterase, putative [Arabidopsis thaliana] (TAIR:AT1G11580.1); similar to pectinesterase (EC 3.1.1.11) PECS-c2 - sweet orange (GB:T10494); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.116696579952359 -1.22897518148901 0.245712443136633 1 0.759887485674834 3.59222666418297 -0.116696579952359 0.0848440377758315 AT5G46115_at 2.13734939859265 1.61486032207038 2.20865580428722 2.30396955641418 1.99941317795356 2.02131602476691 1.79716079904695 2.14746018707495 2.05123849612904 1.9639708727111 2.01442466547185 2.26851964373821 2.43415751253910 2.54574955343053 2.48803751579535 2.34061951407453 2.41980936074967 2.27129652189815 1.78539723469040 0.197095862772941 0.195328437919383 0.19851220857715 0.195328437919383 0.196692492365661 0.199328520464786 0.200105506945377 0.198712977127098 0.213431145578532 0.200062981532088 0.197996486595094 0.195328437919383 0.203663842810465 0.19748504255439 0.201376450500638 0.203235866495127 0.199755219518776 0.195328437919383 0.204493061892125 5 5 + 18718719 18718887 18718795.273 18718547 18718967 + gene protein_coding_gene TRUE TRUE AT5G46115.1 unknown protein 0.128105968148260 1.22797525418076 0.246072493416452 1 0.758804395645125 4.16945431901203 0.128105968148260 0.110167874237513 AT5G18580_at 9.33589563057453 9.3645833290278 9.6645965147574 9.8881325000804 10.0346349511819 10.0992832740033 9.15323682626137 9.52673422419093 9.36196573204693 9.22183594968155 10.0121522597992 9.91103203894469 9.94597997184226 9.87775633781423 9.68049308842383 10.014566335856 9.89872936650022 9.9037990403169 9.31830835963143 0.104757145551623 0.0989743550051823 0.100121101499095 0.100005703780555 0.0984983953128493 0.107272446118871 0.0993330474437073 0.0967054072364174 0.104923686440111 0.09835450679968 0.0975329692624867 0.0988294607075702 0.099443171009989 0.09779818229943 0.100372303547893 0.0985597845156857 0.102403289875806 0.100276596663978 0.100679172326480 5 0|5 /|+ 6177511 6178154 6177827.111 6174998 6178403 + gene protein_coding_gene TRUE TRUE AT5G18580.1 FASS (FASS 1) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to hypothetical protein LOC362739 [Rattus norve (GB:NP_001014218.1); similar to Os05g0149800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054660.1); similar to PREDICTED: similar to chromosome 14 open reading frame 10 [Gallus gallus] (GB:XP_421240.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) -0.112973668757707 -1.22560840994498 0.24692642742666 1 0.756243271991886 19.2365206072883 -0.112973668757707 0.0763151510566573 AT5G61110_at 0.943020910968664 1.38957938981958 1.71875407521772 1.87508468208433 1.01152434677274 1.30503626880374 1.53936795110468 1.55768899293998 1.82129306390371 1.51523348619945 1.60906364967735 1.16518110800790 1.33824067622098 1.26732995975113 1.18397204434354 1.23653827373654 1.34212882563452 1.45655987128695 1.14904518079143 0.187725132125316 0.189719921195327 0.192189548545629 0.192123861479325 0.192695967601673 0.187234594701753 0.187234594701753 0.193952394211588 0.194723429421092 0.187278560691294 0.192915472569412 0.187234594701753 0.197557830964239 0.188129604129477 0.196969004656596 0.191618756448018 0.193704237816635 0.188103186231558 0.192504112397518 5 5|0 -|/ 24598310 24599191 24598749.7 24598304 24599217 - gene protein_coding_gene TRUE TRUE AT5G61110.1 zinc ion binding similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G61100.1); similar to PHD-finger, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX96031.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) -0.121354164838523 -1.22532999884931 0.247027031616674 1 0.755942245435882 2.82754076623754 -0.121354164838523 0.0964053722973233 AT5G49945_at 6.80387215320296 6.4392418187655 7.44426813432821 7.51685978138685 7.84179546489881 7.44355284330138 6.40840566137757 6.27141914036462 5.93944300221354 6.30572257942757 7.56762243217008 7.53568100409522 7.1474332677735 7.25791805809146 7.23830774568872 7.05002527934938 7.13794501690597 7.28011854398267 5.86060179110481 0.199140271593035 0.194062213020292 0.199556426944162 0.20435293174187 0.19269081792517 0.203859896984687 0.192233835576125 0.195287861844869 0.212225391855913 0.195443411059168 0.197588130411004 0.195110497268942 0.194807223053767 0.200178315913986 0.194100769108909 0.190634542659798 0.200341828486798 0.196574473281938 0.194442506667909 5 5 + 20335532 20336319 20335940 20334631 20337056 + gene protein_coding_gene TRUE TRUE AT5G49945.1 Identical to Hypothetical protein At5g49945 precursor [Arabidopsis Thaliana] (GB:Q94CC0;GB:Q9LTX6); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24330.1); similar to ENSANGP00000011982 [Anopheles gambiae str. PEST] (GB:XP_319151.3); similar to Os05g0432400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055631.1); contains InterPro domain Protein of unknown function DUF1682; (InterPro:IPR012879) 0.121616886921230 1.22427979909163 0.247406818758183 1 0.754807187971789 13.6772454794145 0.121616886921230 0.09721719384299 AT5G64250_at 8.47991719042659 8.54204323775179 9.34736925400288 9.35860004323669 9.45808470373622 9.33904983795977 8.41661218988281 8.3493145693086 8.05290116751073 7.98795062467825 8.86594096684885 8.74617350535754 8.94910783319596 9.09982142758896 8.61622568153327 9.02459661785906 8.79804089641272 8.8621417970796 7.84447503616812 0.134909052069654 0.132441226318111 0.133797781654738 0.128111305989941 0.138585755355723 0.133879235435627 0.127790872324852 0.135649270639587 0.141822505301736 0.142315854768009 0.127927136881316 0.126245640077809 0.134816161178639 0.133258221377772 0.142015180220489 0.125028963716188 0.137532823746057 0.136456498896867 0.142533984888091 5 5|0 -|/ 25714879 25715565 25715307.8 25714580 25716438 - gene protein_coding_gene TRUE TRUE AT5G64250.1|AT5G64250.2 2-nitropropane dioxygenase family / NPD family similar to Os08g0485400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062087.1); similar to 2-nitropropane dioxygenase-related protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD09308.1); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009); contains InterPro domain 2-nitropropane dioxygenase, NPD; (InterPro:IPR004136) 0.0987331423010411 1.21978135788022 0.249038908561197 1 0.749953336553881 17.3273897283816 0.0987331423010411 0.0260641497263138 AT5G11220_at 0.567600796698624 0.260019112680906 0.554303339162157 0.755096227110928 0.594219072560214 0.401509579241547 0.50048384966548 0.677893112291485 0.32586844612781 0.450537143171342 0.318569833405774 0.0994481803109755 -0.187678145093515 -0.334128689000903 0.0642279571135802 0.111485665372446 0.242894831013828 0.9697934003916 0.323578473176558 0.188775958476251 0.186670944985533 0.193658181594793 0.186479206890773 0.186479206890773 0.186479206890773 0.188834910660249 0.190749776976598 0.190658117418785 0.189176089493008 0.188765620060316 0.189008417257435 0.189544192538726 0.186479206890773 0.191301499568006 0.194289739896746 0.192247449439331 0.20081773587926 0.193711409472408 5 5 + 3577269 3577760 3577511.545 3577058 3577979 + gene protein_coding_gene TRUE TRUE AT5G11220.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64870.1); similar to Immunoglobulin/major histocompatibility complex [Medicago truncatula] (GB:ABE88482.1) -0.112937193873173 -1.21788015463006 0.249731277491643 1 0.747905865486071 0.802509627850314 -0.112937193873173 0.0780734099988555 AT5G25520_at 7.98479769625149 8.04035340940884 9.13341103782031 9.0692688280506 9.2503951960424 8.98913566187152 8.4005996726483 8.44018843372372 8.4566316547282 8.42922875053809 8.9720225872166 8.78376010144435 8.89620432359112 8.96142304406813 8.8817680045283 8.96216538523027 9.04108036727206 8.91492190741472 8.27212106327276 0.120214918202638 0.114083513857049 0.122562972423749 0.118181176264569 0.114850982995872 0.122206820548862 0.114801892346662 0.121330030590899 0.1253574915684 0.11350172640106 0.112487521155808 0.112487521155808 0.115201258605775 0.114048288424496 0.113407323573559 0.112487521155808 0.121100198237383 0.120540993289515 0.117969927417899 5 5 + 8888921 8889437 8889169 8885091 8889623 + gene protein_coding_gene TRUE TRUE AT5G25520.1|AT5G25520.2 transcription elongation factor-related similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); similar to Os02g0208600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046260.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921)|similar to transcription elongation factor-related [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to PHD finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD24999.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain SPOC; (InterPro:IPR012921) -0.103048008515914 -1.21722193299856 0.249971343688893 1 0.74719755068854 17.3198497609482 -0.103048008515914 0.0480283514680111 AT5G44700_at 0.925737577476156 0.731723064765704 0.840779193610074 0.711364162695215 0.865451533894433 0.975869344626853 0.869617126640989 0.888294241280473 0.910862032561578 0.753539773445681 1.04697184448979 1.12475928386586 1.33477538659882 0.9935056106734 1.17044180462918 0.872808547397291 1.13858093690190 1.15984340167862 0.658509351670485 0.173362459588351 0.175926803695176 0.171470138039707 0.185367938870106 0.170098861338852 0.173306436296277 0.170525160206824 0.172880542754326 0.176698717836326 0.180851280927272 0.170517108735073 0.171758813081068 0.177532028411018 0.168515868513603 0.168515868513603 0.183341487742229 0.173417612316165 0.179006790426862 0.184073401601087 5 5|0 -|/ 18050296 18050852 18050567.8 18050091 18054121 - gene protein_coding_gene TRUE TRUE AT5G44700.1 EDA23 (embryo sac development arrest 23); ATP binding / protein serine/threonine kinase similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G33170.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63930.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G20140.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU44328.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to putative LRR receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84715.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.102198799296292 1.21693167751564 0.250077264181680 1 0.746885295060132 1.79086181625137 0.102198799296292 0.0447709536148649 AT5G44970_at 0.159974133328524 0.307486211635678 0.65890464963753 1.15401749655498 0.414406941412295 0.0930938193181507 0.347290854701719 0.451262618799965 0.6352947700332 0.468574994221873 0.86694018379122 0.731425553576869 1.01407740649078 0.764008821422052 0.829852549278112 0.574327844080991 0.801216106287227 0.528778021660481 0.928281535133784 0.197695184770630 0.198532237745063 0.199119851433468 0.203937274490406 0.196788694968655 0.197827017089081 0.197140772598175 0.196941221335829 0.214327240975657 0.212239218698368 0.197923290985643 0.199496711169012 0.203887265724910 0.198986766539771 0.20159775538343 0.197270669197981 0.202821318923515 0.201537083468398 0.206011815425858 5 5 + 18173861 18174532 18174181.364 18173064 18174567 + gene protein_coding_gene TRUE TRUE AT5G44970.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G44950.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.12528104500361 1.21638213167123 0.250277903735989 1 0.746294245873501 1.16891062931681 0.12528104500361 0.106811154635703 AT5G07500_at 1.77123700538431 1.48558875913475 1.53728643354480 1.56721241969055 1.45805500118843 2.05311117272929 1.99310950345720 1.75197450950093 2.19449953947543 1.67992040922437 2.31345052679917 2.11695268996698 1.8650958260332 1.86036331166211 2.01559618164325 1.95243002043440 2.47677385166358 2.00796434671548 1.97229496790748 0.21057218583391 0.211385870021222 0.203844264573327 0.206896087544495 0.216561763147392 0.208438247685134 0.217912729994174 0.207642274792278 0.215542551755523 0.206685576330030 0.212600340675177 0.211486929071843 0.209927053959976 0.207161837820104 0.20420121342947 0.207276754385903 0.215564889014406 0.211807307628332 0.210222043653281 5 5 + 2372861 2373201 2373023.273 2372620 2373656 + gene protein_coding_gene TRUE TRUE AT5G07500.1 PEI1; nucleic acid binding / transcription factor Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G58620.1); similar to Zn-finger transcription factor [Capsella rubella] (GB:AAR15458.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) -0.132456463866359 -1.21442584543342 0.250993190986124 1 0.744191808633276 3.71468850886238 -0.132456463866359 0.121721343361985 AT5G13750_at 3.84071821376765 3.53277530547494 4.50383236848782 3.78231273809662 5.03697088037808 3.87227059956078 3.9320388871175 3.61746262221170 3.29290574189553 3.20888526743271 4.190232441832 4.72323194894601 5.02480021968682 4.48253503043104 4.30229610885569 5.61386274940759 4.19558398954068 3.64331132018192 3.14332531789456 0.226943054919432 0.222537104424559 0.234362125675759 0.222786653428658 0.232228190763318 0.232661198502301 0.224952180523208 0.219086234182154 0.233209054132324 0.219086234182154 0.226391471819669 0.232905793041143 0.219086234182154 0.232111011482106 0.230548724333036 0.230683433540706 0.254612197423569 0.228604304738274 0.226769000668054 5 5|0 +|/ 4440008 4440863 4440470.625 4438203 4441582 + gene protein_coding_gene TRUE TRUE AT5G13750.1|AT5G13750.2|AT5G13750.3 ZIFL1 (ZINC INDUCED FACILITATOR-LIKE 1); tetracycline:hydrogen antiporter/ transporter similar to ZIF1 (ZINC INDUCED FACILITATOR 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G13740.1); similar to transporter, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22349.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Tetracycline resistance protein; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701)|similar to ZIF1 (ZINC INDUCED FACILITATOR 1), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G13740.1); similar to transporter, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22349.1); similar to Os11g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065685.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Tetracycline resistance protein; (InterPro:IPR001958); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.209313134760104 1.21372377232410 0.251250292088467 1 0.743437891964297 7.88330795281246 0.209313134760104 0.249036687795833 AT5G47530_at 0.898477920663599 1.10489214707987 1.59473417159069 1.36764821955755 1.01503319323481 1.28531966319843 1.07564379847607 1.09528580781301 1.16640704256103 1.42297269772132 1.29650365870319 1.25925673408539 1.66144855751191 1.30586210692189 1.48785711263614 1.38374234482954 1.62344011501795 1.39998758796127 1.34582699213391 0.232127886278481 0.238996225033854 0.234788676422425 0.233971319019022 0.242600434526307 0.234214082348198 0.239678890900275 0.235334944441351 0.250318401886847 0.237609920704068 0.232127886278481 0.232127886278481 0.235146849731873 0.232127886278481 0.238062646742241 0.237545124333548 0.240349908844260 0.237039440267065 0.237216010106876 5 5 + 19299300 19300073 19299704.818 19298601 19300288 + gene protein_coding_gene TRUE TRUE AT5G47530.1 auxin-responsive protein, putative similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G17280.1); similar to hypothetical protein 26.t00022 [Brassica oleracea] (GB:ABD65002.1); contains InterPro domain Protein of unknown function DUF568, DOMON-like; (InterPro:IPR007613); contains InterPro domain DOMON related; (InterPro:IPR005018); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593) 0.109643160769835 1.21134789504472 0.252121907365804 1 0.740888953595107 2.54912829254200 0.109643160769835 0.0708500771660139 AT5G40370_at 12.5463207864789 12.745206344818 13.1423453896978 13.1615656856412 13.0771630962074 12.9255641413853 12.5935170756115 12.7389802326775 12.0857244928546 12.3647004881237 12.8853008466305 12.5836646580213 12.8293978557396 12.8413458623500 12.397344038134 12.9001171441462 12.9513676201414 12.9048929454429 11.8230028067322 0.0771527532934315 0.0745406108237663 0.0776219485885917 0.080012166258153 0.0745406108237663 0.0779832826218421 0.074573099059029 0.0754330577696751 0.0892622309772931 0.0747793866340052 0.0785513639435769 0.0751251646172081 0.0774367072959472 0.0750330197724203 0.0761578607000372 0.0745406108237663 0.0879740836855009 0.0790996816683393 0.0754963120231997 5 0|5 /|- 16165090 16165970 16165416.375 16164822 16166426 - gene protein_coding_gene TRUE TRUE AT5G40370.1 glutaredoxin, putative Identical to Glutaredoxin-C2 (AtGrxC2) (GRXC2) [Arabidopsis Thaliana] (GB:Q9FNE2); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT5G63030.1); similar to glutaredoxin [Tilia platyphyllos] (GB:AAL04507.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutaredoxin active site; (InterPro:IPR011767) 0.10300247821815 1.20997267326594 0.252627524861613 1 0.739415241603498 25.3052435776793 0.10300247821815 0.0501759033399394 AT5G49780_at 1.59771069026100 1.42138379880180 1.75520280865089 1.72999411890919 1.40532110717383 1.29556877985293 1.40757090484981 1.49470214242979 1.82496152947629 1.84205050852307 2.19335110483060 1.98057563354745 1.82086792912061 1.67906185213826 1.77951484867616 1.86830759359526 1.00423547780251 1.83312176475666 1.72043490169738 0.174251897279806 0.170634592421564 0.173479197543288 0.179604445257792 0.179946687241815 0.177950887102745 0.170634592421564 0.171019330422619 0.172431591333027 0.183239436850760 0.171422274464505 0.174131350481919 0.178800894653860 0.175776172784816 0.173033200251485 0.178445469062792 0.180420497851238 0.171334607393895 0.171807707427182 5 5|0 +|/ 20249687 20250296 20250016.2 20245813 20250321 + gene protein_coding_gene TRUE TRUE AT5G49780.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79620.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49770.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93732.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to putative receptor-like protein kinase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD82283.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.100265242776283 -1.20911049953320 0.252944926659444 1 0.738491950742353 3.29627937992816 -0.100265242776283 0.0392204931868375 AT5G59020_at 2.04177558192433 2.25086160430515 2.25299664738385 2.23606930918629 2.46907331404101 2.85940795407655 2.21086372024146 2.67958255554782 2.25255058121777 2.74229150347533 3.09956813394519 2.89401906925819 2.51973962307961 2.39670819498510 2.74657500627208 2.24721637125153 2.53623434819363 2.39149511948594 2.44427779117066 0.197381731587292 0.195333272086931 0.195333272086931 0.197053301068558 0.197048949740277 0.197552969750197 0.197325134243992 0.200058900320025 0.198937536601478 0.199965953482774 0.195333272086931 0.198287053263348 0.195333272086931 0.198610505786334 0.195333272086931 0.199697685672641 0.200132164733339 0.205037657001524 0.199230094004325 5 5|0 -|/ 23844414 23845055 23844665.4 23844201 23847663 - gene protein_coding_gene TRUE TRUE AT5G59020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29510.1); similar to hypothetical protein MtrDRAFT_AC146330g22v1 [Medicago truncatula] (GB:ABE90884.1); contains domain Transcriptional factor tubby, C-terminal domain (SSF54518); contains domain no description (G3D.3.20.90.10) -0.126835128266354 -1.20902513915969 0.252976368659161 1 0.738400565826871 4.91690439013672 -0.126835128266354 0.111625218588057 AT5G35450_at 3.18480755794814 3.1352385131901 3.30767814679916 3.82228671393766 4.14742810652718 3.22309866516688 3.80694893967076 3.87175054069175 2.36828197083010 3.2695510679787 3.45448397770514 3.01805001593857 3.74965629994007 3.93946781498181 3.05626521066996 3.8085723050018 3.68835568886186 3.09133482073157 2.87550109771095 0.223845591315288 0.223845591315288 0.229615040865029 0.224546651975614 0.223845591315288 0.226404360891658 0.226443248005842 0.223845591315288 0.230901420824040 0.223845591315288 0.225959670274718 0.224782902777857 0.224967733478991 0.230232083484921 0.225822473270217 0.226685968015468 0.229710342475128 0.225879104614363 0.229234711758173 5 5 + 13687325 13687877 13687578 13684916 13688363 + gene protein_coding_gene TRUE TRUE AT5G35450.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Probable disease resistance RPP8-like protein 3 (RPP8L3) [Arabidopsis Thaliana] (GB:Q9FJB5;GB:O64978;GB:O64979); similar to RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8) [Arabidopsis thaliana] (TAIR:AT5G43470.2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G53350.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G48620.1); similar to Disease resistance protein RPH8A (RPP8 homolog A) (GB:P59584); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767) -0.166730581075728 -1.20827148436732 0.25325410846545 1 0.737593926424762 6.71918030410917 -0.166730581075728 0.183622597266694 AT5G08310_at 1.74443856905355 1.94074464531851 2.04394681865316 2.18230832649091 2.20575533876829 2.06200589944335 1.71056450065786 2.18157525386396 2.41108342361761 2.34729042421116 2.07149553682346 2.17298439533886 2.6135944487202 1.80474734160485 1.79496482154358 2.29426729899523 2.62443290998722 2.70087418562799 2.23930298459448 0.220258287670942 0.214126867436078 0.214435842216616 0.221466275722640 0.214996397057882 0.216557067390831 0.211465979657706 0.217320363398134 0.213679172073825 0.218974526754751 0.216266297008019 0.216672785578349 0.212352087714422 0.21544102984768 0.215732884984791 0.213884198542993 0.213631690452657 0.224821681543045 0.210749328923578 5 5 - 2670219 2670699 2670488.545 2670135 2675255 - gene protein_coding_gene TRUE TRUE AT5G08310.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G06540.1); similar to Os10g0442700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064699.1); similar to PPR868-14 [Physcomitrella patens] (GB:BAD67154.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.118923107532294 -1.20787520838125 0.253400243254264 1 0.737169939789977 4.30503194976683 -0.118923107532294 0.0948167455896062 AT5G53920_at 2.31875751551941 2.60046447928367 3.07814878439612 2.89282530649526 2.8266339712512 2.94934756448727 2.66025738459227 2.31455234559268 2.05887350005072 2.37248691316129 2.21110465276938 2.08702225016763 2.18668386110506 2.07538415847857 2.02311735569884 1.90052219597814 3.07454015039698 2.24173005023293 1.42476205989483 0.224128779384639 0.209882779892645 0.214140982861406 0.214561111527529 0.216770278659584 0.216501671974662 0.21512283290751 0.212131893165619 0.217825469554039 0.215015753574618 0.216661939262035 0.216356972931594 0.211555228508093 0.213047876301272 0.221482857234178 0.222002233500283 0.216294316953164 0.215894283894704 0.221711469349679 5 5|0 +|/ 21910313 21911220 21910799.444 21909350 21911493 + gene protein_coding_gene TRUE TRUE AT5G53920.1 ribosomal protein L11 methyltransferase-related similar to Ribosomal protein L11 methyltransferase [Burkholderia xenovorans LB400] (GB:YP_560455.1); similar to Os05g0497600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055944.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Ribosomal L11 methyltransferase; (InterPro:IPR010456); contains InterPro domain Ribosomal protein L11 methyltransferase; (InterPro:IPR004498) 0.115218903073838 1.20743430751071 0.253562913463824 1 0.7366983284641 4.79365037331343 0.115218903073838 0.0862281577983998 AT5G24860_at 1.89981788001896 1.47970430522615 1.90016204708730 1.67873174026934 1.31614528391951 1.57524419509880 1.50452946394370 1.27779271209339 1.53624849778733 1.20466534048388 1.4783421989648 1.44390404383491 1.42094587874989 1.98829209693191 1.76804373349480 1.57047195651822 1.90188598126443 1.60861894321615 1.06232444651811 0.212141671853149 0.212141671853149 0.218036101630620 0.220868400636029 0.219059382810271 0.212152800660231 0.219639422486476 0.212141671853149 0.214875724583243 0.221532445658755 0.227701577804388 0.214508765513405 0.217252464776127 0.226135720708038 0.223176230759001 0.217205182460165 0.212704305140500 0.236931580186608 0.221165119802559 5 5 + 8541827 8542074 8541939.273 8541781 8542452 + gene protein_coding_gene TRUE TRUE AT5G24860.1 FPF1 (FLOWERING PROMOTING FACTOR 1) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10625.1); similar to FPF1 protein [Sinapis alba] (GB:CAA72716.1) 0.121809968481147 1.20666699299851 0.253846212570456 1 0.73587787081346 3.03667055298297 0.121809968481147 0.101509298431600 AT5G11940_at 0.598781165720465 0.258602203615691 0.824729933481763 0.867872489512077 0.797377071311572 0.590551297611216 0.538691453257892 0.366571478475568 0.264925963704476 0.451759696796085 0.748539154872179 -0.0250347152617437 -0.0921914572476985 0.434891080289561 1.00889229678422 0.273060384281518 0.563064916409626 0.814294961447059 0.7106627123342 0.198690052095391 0.197922420238498 0.197922420238498 0.202237707047848 0.197922420238498 0.209184577441309 0.199885287683437 0.198848777756859 0.202709586987269 0.207259111455194 0.201689475231320 0.201790234910096 0.210935999667662 0.206175336941766 0.205400143175077 0.202428407107866 0.203832280158561 0.211789397451349 0.197922420238498 5 5|0 +|/ 3851633 3852362 3852092.5 3849284 3852418 + gene protein_coding_gene TRUE TRUE AT5G11940.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G32960.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10540.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT1G32940.1); similar to Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE90461.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.110848235520836 1.20616053243455 0.254033340473755 1 0.735336544631094 1.07613332094416 0.110848235520836 0.0754298397282907 AT5G06830_at 5.01603706648201 5.34592633498441 5.94105514343555 5.999078478644 6.18662086165973 6.02458718405468 5.00652806767278 5.33629232056488 3.96772693238499 4.08607665997062 5.56838899190525 5.94146800398403 5.58009581904861 5.36267997441348 5.18739119348093 5.58566481665903 5.14210421286083 5.35808329250185 4.51295857705119 0.247328660895971 0.232829383489989 0.232829383489989 0.237153575352332 0.242178134999547 0.248406832593805 0.241231457560445 0.243045731157963 0.249667201082616 0.243281868468286 0.25638641042608 0.238175984013694 0.234260857278411 0.242633365353448 0.234310450862441 0.237850853146281 0.243132980162999 0.235550427923539 0.238319443491225 5 5 - 2117138 2117815 2117470 2116784 2119630 - gene protein_coding_gene TRUE TRUE AT5G06830.1 Identical to CDK5RAP3-like protein [Arabidopsis Thaliana] (GB:Q9FG23); similar to Os06g0320100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057510.1); similar to CDK5 regulatory subunit associated protein 3 [Mus musculus] (GB:NP_084524.1); contains InterPro domain Protein of unknown function DUF773; (InterPro:IPR008491) 0.114978129606053 1.20572181049626 0.254195529128933 1 0.734867756091521 10.4343433128084 0.114978129606053 0.0860401983140368 AT5G49380_at 1.61638766268144 1.26108570729359 0.864147751701545 1.21836212369582 1.23493646968518 1.2304847059126 1.27549817030541 1.01138805408298 1.05298836742347 1.37919495793805 1.59963633576037 1.08756895208642 1.46212263852590 1.44911648436829 1.45805872187643 1.30617709977008 1.65758678626367 1.37736522568693 1.5844282838741 0.188790654872969 0.195717219665282 0.186191888471419 0.198240089837909 0.184397610163879 0.185518322922693 0.190466819357690 0.185663513237036 0.187491555459572 0.201555179581968 0.184422504055642 0.185639161156015 0.195546229428411 0.187257616516303 0.202031210939378 0.191347221498271 0.189369114027165 0.186721752851915 0.187855210600764 5 5|0 +|/ 20042848 20044230 20043799.375 20042791 20044304 + gene protein_coding_gene TRUE TRUE AT5G49380.1 hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism similar to binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism [Arabidopsis thaliana] (TAIR:AT3G06670.1); similar to Protein of unknown function DUF625 [Medicago truncatula] (GB:ABD32317.1); contains InterPro domain Protein of unknown function DUF625; (InterPro:IPR006887); contains InterPro domain ATPase, F1 complex, gamma subunit; (InterPro:IPR000131) -0.120171317600305 -1.20565813420765 0.254219076121498 1 0.734799726400759 2.59582361414689 -0.120171317600305 0.0981208151177214 AT5G58750_at 1.46612035517347 1.83693320417460 2.27748303067967 2.24604814455272 1.60928004277809 1.69611648630529 1.92143382185727 1.62618844425943 2.33461257296014 1.81586076266480 1.9114829098488 1.84353087212718 1.93157272535948 1.80362925121865 1.96334145780443 1.93871310508920 2.3675321746411 2.08721856516541 2.24768199856219 0.152335210359635 0.156446935518989 0.150982717155427 0.155309260671372 0.155388094805723 0.151249954827651 0.151436235358802 0.157304936690551 0.156786004001946 0.158552237367019 0.162438895104010 0.150982717155427 0.154667277597105 0.152668405195306 0.157689638811205 0.156979651045191 0.156618317246962 0.154535664906325 0.155139305688226 5 5 + 23746678 23747142 23746871 23746014 23747348 + gene protein_coding_gene TRUE TRUE AT5G58750.1 wound-responsive protein-related similar to VEP1 (VEIN PATTERNING 1) [Arabidopsis thaliana] (TAIR:AT4G24220.2); similar to hypothetical protein MtrDRAFT_AC158501g12v1 [Medicago truncatula] (GB:ABD33275.1); contains domain NAD(P)-binding Rossmann-fold domains (SSF51735); contains domain no description (G3D.3.40.50.720) -0.113957069868883 -1.20556125340432 0.25425490522038 1 0.734696227173626 3.89174847991548 -0.113957069868883 0.0835695865018436 AT5G16970_at 8.505867579545 9.14741759562131 9.20462846969146 9.40507298276622 9.67347714176931 9.46044381815355 7.94081800666408 8.40361894310014 6.11371540109652 7.2625237043132 6.98036548928776 7.96802638881958 8.1295413732784 7.97063629720358 7.73901465784045 8.54035226648711 8.1856278650605 7.7683513967529 6.94452240223647 0.169593550724849 0.167147355559508 0.166695612322626 0.168598289364492 0.169966601867984 0.168090461429911 0.167127322971531 0.16993178412229 0.175714847528474 0.168429775679758 0.17064042461331 0.166695612322626 0.166695612322626 0.176099381349019 0.175050227496709 0.167459193891337 0.184319645038771 0.166695612322626 0.176383788924670 5 5|0 -|/ 5576352 5576811 5576462.778 5576171 5578078 - gene protein_coding_gene TRUE TRUE AT5G16970.1 AT-AER (ALKENAL REDUCTASE); 2-alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls Identical to Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74) (P1) [Arabidopsis Thaliana] (GB:Q39172); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 0.144333008602885 1.20493656069799 0.254486029919553 1 0.734029006185954 16.3095813851922 0.144333008602885 0.145955203167777 AT5G43040_at 1.385001589752 1.64061981122419 1.6456815135614 1.70414603616703 1.40350229731379 1.65070213993165 1.56403939473108 1.51799146884769 1.38682428748572 1.50109086975896 0.892578419236771 1.24050346102483 1.49490716648791 0.999941466874078 1.31667649374250 1.42585263869908 1.39768536339981 1.23077222396744 1.13377306798239 0.205778623684664 0.207559848216816 0.206818310238707 0.209459269379611 0.204513073350714 0.204298451991144 0.204613603292219 0.205693961265510 0.209362772213981 0.212661801751803 0.207625484775134 0.204298451991144 0.204298451991144 0.205656290593991 0.204298451991144 0.208890471687243 0.209702445357796 0.207358299912703 0.207063314446541 5 5 - 17281294 17281761 17281497.182 17281193 17282848 - gene protein_coding_gene TRUE TRUE AT5G43040.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43030.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.106140811769775 -1.20263339045398 0.255339607749922 1 0.731571249922204 2.85917422940181 -0.106140811769775 0.0628707734670496 AT5G10880_at 1.13831376335814 1.28539163663144 1.34681464998536 1.47473462896739 1.08465856547687 1.2556245769193 1.29461247701936 1.26704098232909 1.98542435651129 1.39595988349408 1.23589920131873 1.66656298933439 1.71462221151998 1.46951201265666 1.38680475165021 1.6186725875329 1.34115804924008 1.47073589551707 1.25537715432573 0.203190945118633 0.206583706343464 0.205433479132260 0.214110156470311 0.204637162907164 0.202844437748834 0.204129346525612 0.206481984726886 0.202387677918005 0.203425836378892 0.206725024064849 0.203662147168887 0.216233654839715 0.204455762532906 0.215546997688484 0.202387677918005 0.206651947995334 0.211720673004172 0.206867265924813 5 5 + 3433276 3433798 3433524.545 3432694 3433868 + gene protein_coding_gene TRUE TRUE AT5G10880.1 tRNA synthetase-related / tRNA ligase-related similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT3G62120.2); similar to Bifunctional aminoacyl-tRNA synthetase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97739.1); similar to Os12g0443700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066707.1); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain Prolyl-tRNA synthetase, class IIa; (InterPro:IPR002316) -0.101012304931502 -1.20178707977134 0.255653831494639 1 0.730669010576831 2.78519045698085 -0.101012304931502 0.0451221531159777 AT5G13790_at 1.74626371642476 1.72325608608526 1.58097893710895 2.24937118495127 1.29415465461092 2.14554584121629 1.31316341818998 1.83078007319133 2.35762768179946 2.32347368743512 1.71506645494603 1.78270608509263 2.06771631018847 2.02879145983385 2.12068646483269 2.04818178617885 2.39453287430690 2.08665741474596 2.03459717596542 0.198416655299520 0.202770889999592 0.203078541606146 0.207617545915465 0.204654264066801 0.206808295327228 0.204303408506263 0.205772635899693 0.201111053274988 0.199874937972658 0.197104232555923 0.195369069679494 0.198867204449527 0.197512902095940 0.202485081875837 0.199371275451971 0.202385323941729 0.2010402034724 0.199232959985395 5 5|0 -|/ 4449154 4450401 4449642.5 4449017 4450846 - gene protein_coding_gene TRUE TRUE AT5G13790.1 AGL15 (AGAMOUS-LIKE 15); DNA binding / transcription factor AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Identical to Agamous-like MADS-box protein AGL15 (AGL15) [Arabidopsis Thaliana] (GB:Q38847;GB:Q38839); similar to AGL18 (AGAMOUS-LIKE 18), transcription factor [Arabidopsis thaliana] (TAIR:AT3G57390.1); similar to MADS-box protein AGL15 (GB:AAC49083.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.180649945342852 -1.20169646956856 0.255687492088164 1 0.730572440256286 3.86999350797185 -0.180649945342852 0.207670752253988 AT5G13680_at 5.03928089602244 5.39276990559939 6.23716431126307 6.56020989214671 6.46407027870014 5.94524291646582 4.90771556050358 4.71068768710255 4.36600707804024 4.14023237436057 5.50249353376128 5.30313847633685 5.35670308113888 4.7536880950785 5.24213400185025 5.40279370394249 5.98639163505296 5.05789253397008 4.77870449492063 0.229274936571300 0.224585390828134 0.244568625345315 0.234121730779174 0.234587186585713 0.250251555321731 0.233792489021132 0.225193757858643 0.234859622959159 0.229674453992639 0.224525856745573 0.231108813046209 0.222442356017705 0.224841551964831 0.233425813356084 0.223726252947496 0.239063241100353 0.231092006795434 0.224351966085763 5 5|0 -|/ 4410548 4411698 4410921.778 4410364 4415474 - gene protein_coding_gene TRUE TRUE AT5G13680.1 ABO1/ELO2 (ABA-OVERLY SENSITIVE 1); transcriptional elongation regulator A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. similar to putative IkappaB kinase complex-associated protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20879.1); similar to Os07g0563700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059998.1); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain IKI3; (InterPro:IPR006849) 0.133394463516313 1.19897035160923 0.256701863416023 1 0.727669529032869 10.5341271968497 0.133394463516313 0.126852107254057 AT5G18060_at 5.0179218674115 5.12886182754438 4.77569798414128 5.09461321276913 6.51093409990871 6.11917870967258 4.95423083992238 5.27517512546605 8.13244571190208 5.99948818921336 9.54250981960595 9.84671822824637 9.852720308805 8.83452123815539 10.1840905822566 9.26032909574157 7.78760460597866 8.59064691681333 8.2014760112189 0.462297183490367 0.462297183490367 0.477324079559349 0.47197337278608 0.462297183490367 0.462297183490367 0.462297183490367 0.466406680268115 0.462297183490367 0.462297183490367 0.462297183490367 0.468435100382382 0.467716878446406 0.469023815407146 0.475212984871571 0.462297183490367 0.473006951207630 0.462297183490367 0.462297183490367 5 5 + 5976060 5976280 5976160.4 5975956 5976498 + gene protein_coding_gene TRUE TRUE AT5G18060.1 auxin-responsive protein, putative similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G18050.1); similar to SAUR [Raphanus sativus] (GB:BAA25434.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.122785398112349 1.19885980626642 0.256743064119714 1 0.72755191779358 13.7005079934687 0.122785398112349 0.105335023025287 AT5G52950_at 2.24577864665759 2.38993116120367 2.63408964827948 2.55236655002592 1.90838292231418 2.0789263294131 2.33285721308647 2.36397302012611 2.24628424402793 2.20461189599110 2.50657566391993 2.9349742620207 2.49240576017577 2.58157207372081 2.66109314955506 2.2263557200295 2.37848253808898 2.73309474273654 2.26314589005746 0.179470125801167 0.171062575839108 0.176043460016462 0.178666632868501 0.173618604929158 0.173843103382311 0.178757218334756 0.171758049153332 0.178524166347661 0.188656323278076 0.170887478525482 0.180549856649991 0.172290430088435 0.170887478525482 0.170887478525482 0.172033140114137 0.188529505102799 0.181042058037380 0.183718357495795 5 5 - 21491122 21491623 21491337.818 21491113 21494165 - gene protein_coding_gene TRUE TRUE AT5G52950.1 similar to hypothetical protein MtrDRAFT_AC121241g10v1 [Medicago truncatula] (GB:ABE85371.1) -0.0999122647826936 -1.19880218526650 0.256764541789424 1 0.727490616933444 4.71445481079152 -0.0999122647826936 0.0415013297663991 AT5G60450_at 5.36667425523177 4.9983313911125 4.75480363593782 4.87837099188552 6.52327390895543 6.2041847361235 3.92422074126895 3.56686922423816 3.17160367643447 3.70894709396836 4.31051566650131 4.38915836544173 4.4129778591232 4.82137869173487 4.47537934525694 4.01638911649469 4.68283404138701 3.69802505793052 3.7455538952016 0.221523282424076 0.221411383245846 0.240472035826523 0.224200457517594 0.238090184210719 0.256539067198487 0.221501080950872 0.227604577768335 0.232173800285490 0.229567090090501 0.221411383245846 0.221411383245846 0.22917636077175 0.229860181923805 0.229801613761317 0.222884716299965 0.235192070744139 0.238556656141147 0.223215823571293 5 5|0 -|/ 24325789 24326535 24326177.9 24325548 24329924 - gene protein_coding_gene TRUE TRUE AT5G60450.1 ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. Identical to Auxin response factor 4 (ARF4) [Arabidopsis Thaliana] (GB:Q9ZTX9); similar to ETT (ETTIN), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33860.1); similar to auxin response factor 4 [Lycopersicon esculentum] (GB:ABC69715.1); similar to Transcriptional factor B3 [Medicago truncatula] (GB:ABD33064.1); similar to Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation [Medicago truncatula] (GB:ABE89541.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525) 0.123374237674034 1.19817892642038 0.256996946863904 1 0.726827694516329 8.9735246888535 0.123374237674034 0.106743079954546 AT5G28300_at 4.44717636286549 4.90916018682067 5.15238490215282 5.09928028498715 6.25753373364198 5.5939314770981 4.21769694841584 4.63901561399797 6.26572136992819 5.83536962021964 8.56081119573065 8.6147846089065 6.90308743400594 7.0290661515978 8.23222467515745 7.27830149527186 5.42044428626559 7.19671526766003 6.01003029060792 0.249131160113725 0.245302726461262 0.257983700675571 0.252574214159555 0.244483235016762 0.262400950771251 0.253130350159363 0.244483235016762 0.244483235016762 0.251012495789137 0.256545057857515 0.271522497605350 0.244483235016762 0.271625529267199 0.254484851337721 0.245406754068351 0.27566178884907 0.251612127767662 0.246511144999020 5 5 - 10292801 10293350 10292978.636 10292655 10295287 - gene protein_coding_gene TRUE TRUE AT5G28300.1 trihelix DNA-binding protein, putative similar to trihelix DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G76880.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17016.1); similar to Os03g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048736.1); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.150299911816427 1.19805189639774 0.257044335223528 1 0.72669261181611 11.7602573468690 0.150299911816427 0.158051737461566 AT5G07660_at 1.89325243349356 1.7438119356622 2.10499954609787 2.16532754796367 2.2571692032539 1.88078242992290 1.79983675595000 1.73268021908143 1.93206429281814 2.03937019585705 2.19797609040550 2.16673582685446 2.15470787777600 1.94056152952662 2.44452693696786 2.30578709859344 1.74095885956190 2.08689001394819 1.70305373942099 0.179938503231407 0.183618130780455 0.188173729208316 0.185740534170416 0.197191995312073 0.185051541985166 0.181558755816680 0.182754269104219 0.179857556218638 0.181909876495198 0.182039716957861 0.184392365888829 0.185975136488557 0.189125692106729 0.179857556218638 0.180025375076975 0.18253813676304 0.188541515513162 0.184415866155446 5 5|0 +|/ 2428522 2429887 2429326.667 2422840 2429913 + gene protein_coding_gene TRUE TRUE AT5G07660.1 structural maintenance of chromosomes (SMC) family protein similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC), ATP binding [Arabidopsis thaliana] (TAIR:AT5G61460.1); similar to SMC6 protein [Oryza sativa] (GB:CAD59413.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.108616942246509 1.19626874704923 0.257710270259262 1 0.724797547566451 3.95786456154634 0.108616942246509 0.0718018239546602 AT5G28820_at 1.49383178833421 1.45549336870727 1.74898719062314 1.92196348186152 1.16538644137687 1.594921278224 0.906145658360657 1.53461775943906 1.53833825130179 1.25442524808372 0.88128004021073 1.14081853030340 1.25476084952431 1.20053338549681 0.952725860600524 1.25437576447511 1.42003085775528 1.1292508422239 1.70403509257217 0.175459342095276 0.173014111295740 0.182965455210570 0.173654779754031 0.172713340454064 0.172477430873292 0.174623781825466 0.175306539294894 0.171532860556671 0.174528036664678 0.170531754427208 0.173126803294435 0.172782118989888 0.179100000986713 0.190254522624205 0.171551103533685 0.169749737567293 0.173470260593276 0.175072508586157 5 5|0 +|/ 10831839 10832506 10832214 10831803 10832536 + gene protein_coding_gene TRUE TRUE AT5G28820.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27260.1) -0.137383031271626 -1.19526916948738 0.258084172119313 1 0.723736151230887 2.80424581102067 -0.137383031271626 0.135256140889612 AT5G53440_at 7.84956948366221 8.06170207550062 8.68400276261248 8.66289175186476 8.93677317779975 8.72141605295162 7.70917472735888 7.79774789854948 8.25081480625663 8.37211008000775 9.09320481589314 9.23272975872903 8.98359571191576 8.99247009941637 8.7714139686174 9.39394229578144 8.98811775028373 8.63887725862671 8.67993730998308 0.146495498954048 0.149084299175500 0.147539155364488 0.147200018033386 0.149737561693385 0.155441237359222 0.151007510083773 0.14779740890767 0.163975068787304 0.144960417488019 0.147841349261820 0.150880634479397 0.145990381304904 0.148736563475893 0.145858907701773 0.148666435605364 0.154080865181995 0.149657954046546 0.149817319137044 5 5 - 21700907 21701428 21701187.909 21700905 21705196 - gene protein_coding_gene TRUE TRUE AT5G53440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to unnamed protein product; gene_id:MYN8.5 pir||T34137 similar to unknown protein-related [Medicago truncatula] (GB:ABE80840.1) -0.102811783939362 -1.19327612145743 0.25883097814641 1 0.721621812386389 17.0259504193660 -0.102811783939362 0.0546342670791885 AT5G42150_at 6.27726829194808 6.94399749825323 8.04788876416647 8.22061458476531 6.99258369427825 7.07147981303134 6.23000557925344 6.64106908979251 3.5986526709388 5.16826557657553 5.14641171340784 6.09206299027216 5.70249738660508 5.17419795357502 5.39913493449367 6.25573715905414 6.53831494069988 5.51854268041633 4.55650596752302 0.232065913526381 0.230002749297666 0.2287471035628 0.226912644819617 0.223432720255740 0.228502019809413 0.223619142116567 0.223432720255740 0.250158070258873 0.226007906367916 0.229040011430605 0.233056772105257 0.226709285373867 0.237009608626756 0.229219848290061 0.223432720255740 0.24153966321605 0.231495045063847 0.231659278907552 5 5|0 +|/ 16864100 16865101 16864652.9 16863378 16865507 + gene protein_coding_gene TRUE TRUE AT5G42150.1 electron carrier/ protein disulfide oxidoreductase similar to H0211F06-OSIGBa0153M17.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67930.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.139396506394116 1.19316664523346 0.258872049170877 1 0.721505749819132 12.1378653518501 0.139396506394116 0.139473883879927 AT5G51310_at 1.22024217134917 1.94336082804308 1.90130167672029 2.11585639321831 1.27253074029016 1.88372878372036 1.97628447139118 2.14825862794543 1.4585518394155 1.67224983102249 2.13275244819123 2.93168242013817 2.5905298166288 2.62606023901377 1.99627577234162 2.83625039739082 1.89505687850725 2.37697676789653 2.14616660952296 0.195049853165355 0.195383640825991 0.197868281112123 0.198508301729445 0.202605668182861 0.202810284353178 0.19982961917713 0.196180638671083 0.201251260923332 0.199066836000672 0.195049853165355 0.196593791407431 0.197353196259318 0.200009091384899 0.202465037824633 0.199013460578952 0.199251083988331 0.195487181382434 0.210060862232386 5 5 - 20870099 20870648 20870401.636 20870080 20871944 - gene protein_coding_gene TRUE TRUE AT5G51310.1 gibberellin 20-oxidase-related similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G23340.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABD32837.1); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.156920100519053 1.19302885354300 0.258923750363211 1 0.721359679523915 3.89878922116834 0.156920100519053 0.170621058285718 AT5G67260_at 7.8737624125323 8.10645968771443 8.77936402714844 8.79537702457098 9.69113356977386 9.19525523423996 8.83022969348375 8.57311211730835 7.87244425888173 7.99957145849018 8.60429222923807 8.62203747660006 8.5554037512658 8.4718361519434 8.81736620687139 9.09376653513288 8.74170243506613 8.51781800417486 8.18106911464351 0.135038172194257 0.123668009363940 0.126495172125785 0.126699929561419 0.125864919878408 0.132256540793641 0.121837675911225 0.130434565862638 0.151125927118670 0.135819199152828 0.122194997381613 0.121837675911225 0.123675502991683 0.127065363901589 0.127294155640798 0.123721215114193 0.133993293208212 0.131282729139069 0.128311625347731 5 5 + 26854206 26854853 26854434.909 26853374 26855037 + gene protein_coding_gene TRUE TRUE AT5G67260.1 CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinase similar to CYCD3,3 (CYCLIN D3,3), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT3G50070.1); similar to cyclin D3-2 [Euphorbia esula] (GB:AAS48460.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) -0.121645993465847 -1.19036052389987 0.259926559147055 1 0.718533511938908 17.0784481172424 -0.121645993465847 0.104753006996531 AT5G23450_at 8.2390313132696 8.34579044831098 9.08326411256721 9.12987151036897 9.29643445148323 9.12935465009203 8.31237917518103 8.23756153489696 8.60144364482137 8.33507271425506 9.52475994221325 9.4255030459 9.40428011867463 9.57837315188991 9.16252710222756 9.44019333426404 9.18355103715279 9.28716319137007 8.43681176790551 0.105487075058166 0.0892148187461527 0.0971673692908807 0.0975168807114321 0.094095196499976 0.0929544170921218 0.0978316317075218 0.093062559141041 0.096781119985085 0.0973890176292365 0.0895628464034692 0.090367643936421 0.0919426767003234 0.0892148187461527 0.0987281493642988 0.0925126459478867 0.0963307415316323 0.0932824725313214 0.094257119337286 5 5 - 7905045 7905752 7905462.182 7904711 7909588 - gene protein_coding_gene TRUE TRUE AT5G23450.1|AT5G23450.2|AT5G23450.3 ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1); diacylglycerol kinase Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine. similar to diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.2); similar to Os10g0516800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065066.1); similar to sphingosine kinase [Lotus japonicus] (GB:BAD86587.1); similar to Os04g0541500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053445.1); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) 0.0983193014379236 1.18984472097741 0.260120762664228 1 0.717987741790511 17.6384958534157 0.0983193014379236 0.0375505100947096 AT5G61800_at 2.07708882569718 1.93920751937141 2.16386056304158 2.37591258695089 1.94191515925855 1.97318530847413 1.88744809308748 1.63069722166531 1.9312486122497 2.08124533902059 1.89408410561738 2.0628336072766 2.32475192798975 2.3374664628744 2.61622303656098 2.18374350547742 2.47323592724524 2.15861878779934 1.76049429336967 0.168918874471690 0.171447556380351 0.169800724391133 0.173019780904759 0.168918874471690 0.173257342681508 0.171536298333308 0.172024412445916 0.168918874471690 0.176856238170012 0.17208769648168 0.171346815305016 0.171904001299745 0.168918874471690 0.171101427806549 0.177802343323994 0.173602000983695 0.179430478109148 0.171715994323151 5 5 - 24847414 24847794 24847590.727 24847213 24848779 - gene protein_coding_gene TRUE TRUE AT5G61800.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18840.1); similar to OSJNBb0012E08.2 [Oryza sativa (japonica cultivar-group)] (GB:CAD40778.1); similar to OSIGBa0155K12.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66401.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE93365.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.104853141260356 1.18900360390486 0.260437696179607 1 0.717098135535945 4.08901395218588 0.104853141260356 0.0626056544136309 AT5G17200_at 0.878127977589011 0.92087698784485 0.832775913359318 1.102988206251 1.06473618221855 1.10216003632348 0.8314882051339 1.11797423646391 1.20436725953955 1.16549716456882 1.32954292197847 0.831543751254975 1.36672283636315 0.822047712191603 0.54008633436787 1.05173342652391 0.563162130928565 1.90440939668981 1.27444567087950 0.179556850469747 0.178622810152697 0.176472341193379 0.179185111759307 0.176810303987075 0.181526822525741 0.176472341193379 0.176855751318899 0.183388733277880 0.177269698498441 0.176472341193379 0.189911100806002 0.176472341193379 0.176741730555044 0.176472341193379 0.176790941861813 0.180190080867785 0.184996821345611 0.182970550571082 5 5 - 5653578 5654297 5653812.182 5653526 5655338 - gene protein_coding_gene TRUE TRUE AT5G17200.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT3G15720.1); similar to PGN [Glycine max] (GB:AAY21049.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat; (InterPro:IPR006626) -0.106785159410009 -1.18742613161020 0.261032914542262 1 0.715430989442654 2.11435401587296 -0.106785159410009 0.0688568289186953 AT5G25090_at 0.936725275717109 1.03184000257754 1.01503116769258 1.12586986947287 0.935844714715682 0.778534767709035 1.02725920909287 1.14260032420894 1.14236182269830 1.44001368025511 0.89853259001419 1.69683543305384 1.14265286875794 1.55047832841929 1.15110040792908 1.38577553579000 1.78471937348874 1.20265409649559 1.39573608083152 0.197739947787418 0.19652055586894 0.205803726627295 0.195311225831789 0.198260763891016 0.200170101247842 0.197518024397621 0.198387769427021 0.198527192807209 0.197109762474562 0.196306922230228 0.194606605128002 0.199300513411559 0.195000080295814 0.195304015869927 0.197844289891919 0.198160680660813 0.194068817563099 0.196827735176601 5 5|0 -|/ 8647195 8647704 8647441.5 8647021 8647820 - gene protein_coding_gene TRUE TRUE AT5G25090.1 plastocyanin-like domain-containing protein Identical to Early nodulin-like protein 3 precursor (Phytocyanin-like protein) [Arabidopsis Thaliana] (GB:Q8LC95); similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G25060.1); similar to Blue (type 1) copper domain [Medicago truncatula] (GB:ABE93906.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) -0.099076019862074 -1.18696079367359 0.261208703596273 1 0.714939514118854 2.33802855331761 -0.099076019862074 0.042170698673774 AT5G09470_at 2.0643035787944 2.02991387809776 2.26141298302027 2.07708054345716 1.83164738071654 1.33720536383484 2.01267422348654 1.43215298950369 1.82118807740489 1.74285017064192 1.58300656720232 1.83084846605688 1.57768570819482 1.87049119029746 1.68351524098999 1.75199412015342 1.80197484537832 1.90704759542365 1.63516063021667 0.207785479862756 0.207568234185091 0.207310705382629 0.209927534720593 0.210044671483935 0.211011959240108 0.213112346857563 0.209082453666012 0.203786336109648 0.216092626280793 0.203905973143297 0.204262345592116 0.21584067821281 0.208404190687070 0.20764604384348 0.203786336109648 0.208451675841855 0.213837549875881 0.207278297497421 5 5 - 2949283 2949785 2949570.182 2949242 2950514 - gene protein_coding_gene TRUE TRUE AT5G09470.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT4G24570.1); similar to putative mitochondrial dicarboxylate carrier protein [Trifolium pratense] (GB:BAE71294.1); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.136601587259655 -1.18554242280894 0.261745095331242 1 0.713442362693055 3.6227422473472 -0.136601587259655 0.135893527140272 AT5G14790_at 3.49610773911339 4.00600793191077 3.68944622774478 3.41015502292836 4.43873404768992 3.99033550178081 4.18636821662623 4.06475631576023 3.6544231862627 4.09806062178784 5.95217736657439 6.56825807877369 5.27318141708674 5.90717336410989 6.22527832242276 4.96845556307187 4.87427764656937 5.56925430824383 3.43262038033172 0.218519495089379 0.214434358706897 0.221117934024598 0.220112100236982 0.215201936885939 0.218457826604589 0.22631394427259 0.215987130287887 0.230847317941762 0.214680978347090 0.218453551379112 0.219178922536449 0.219554755667923 0.218783894877744 0.223152787867535 0.214434358706897 0.217167892133644 0.218433595612762 0.221316383059392 5 5|0 +|/ 4784987 4785475 4785274.5 4782949 4785808 + gene protein_coding_gene TRUE TRUE AT5G14790.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G01450.1); similar to Os02g0305700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046637.1); similar to Os08g0534900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062351.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD13157.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.132729491667706 1.18407196627989 0.262302105332486 1 0.711891644572942 8.60805141101964 0.132729491667706 0.128789472936182 AT5G14310_at 5.48487020584689 5.33006804689445 6.31761155435223 6.42081026062085 5.69858557601112 5.94674369318711 4.50613642365016 5.25014241058898 4.7692994355089 4.52002161396845 6.05648733731165 6.12487724474196 6.21007109517507 6.36810228054199 6.12255423489831 5.98345177027738 5.47881996458217 5.22299430432756 4.69842544904522 0.211955411593455 0.205692244675142 0.207927631781173 0.202537245034941 0.204709811240457 0.213351184649002 0.210952201104651 0.207595763893626 0.213876248339756 0.211091782232442 0.212105454003387 0.207333531517452 0.206357800574743 0.212018285182197 0.204248070449548 0.214113147101758 0.218661720090816 0.213932687611737 0.208754370492210 5 5|0 +|/ 4616346 4617354 4617085.1 4615321 4617618 + gene protein_coding_gene TRUE TRUE AT5G14310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27320.1); similar to CXE carboxylesterase [Actinidia deliciosa] (GB:ABB89022.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.138291338153886 1.18361799840792 0.262474258169083 1 0.711413188496601 10.9236219939721 0.138291338153886 0.139493335160377 AT5G41190_at 5.67484349493567 6.09174203009091 6.66178613057944 6.47502348950846 6.36084218465854 6.67158338017172 5.55662446157146 5.6380582585522 4.39517269544689 4.70837978040293 6.00489690226642 6.61376106405063 6.18182437613612 5.70978037523144 6.86117192305748 6.2667096688294 6.37966528491399 5.97906206656658 5.25658806444278 0.231759312370505 0.218705808917361 0.230342522440019 0.231032218157459 0.224139311908919 0.218705808917361 0.224157588029146 0.220772486587128 0.239600274985824 0.228242570182853 0.218705808917361 0.219560327177035 0.221785717243532 0.225601200304416 0.227812214005267 0.218705808917361 0.229778886580625 0.249813233829206 0.232230893797375 5 5|0 -|/ 16504863 16505768 16505302.333 16504703 16507329 - gene protein_coding_gene TRUE TRUE AT5G41190.1 similar to unnamed protein product; gene_id:MEE6.26 unknown protein [Medicago truncatula] (GB:ABE92144.1); contains domain RNA-BINDING PROTEIN NOB1 (PTHR12814) 0.117288926024384 1.18323319700068 0.262620251858606 1 0.711007737331958 11.6594741642897 0.117288926024384 0.0966438991574382 AT5G61820_at 9.87955089599653 10.0970422817228 11.0342846866028 11.3967028804895 10.9051636813362 10.7652092323757 10.7453805708658 10.9405484988158 8.41391830250822 9.6682800730496 9.51192564104377 9.28634524131816 10.3932590063386 10.2457217782981 8.92924669290336 10.4433967557625 10.7427965259775 10.1540099032101 9.03054651292679 0.116586943633380 0.111161762861204 0.111071680419813 0.112178654900650 0.111723888475740 0.117671306843729 0.112746354871732 0.110747588161177 0.125923660144300 0.107435303312699 0.107435303312699 0.115187225516456 0.111419370344931 0.116501413270278 0.122233766611757 0.113972960374631 0.115652760493436 0.116275309868325 0.118778004558439 5 5|0 -|/ 24851781 24852363 24852049.4 24851544 24853920 - gene protein_coding_gene TRUE TRUE AT5G61820.1 similar to hypothetical protein [Trifolium pratense] (GB:BAE71234.1); contains InterPro domain Stress up-regulated Nod 19; (InterPro:IPR011692) 0.112045289381904 1.18299546762345 0.262710478522061 1 0.710757299856192 20.2209450023263 0.112045289381904 0.0841279253934784 AT5G12890_at 7.83728030248526 7.88631248200878 8.61644736316166 8.70550605329273 8.26337057735454 8.43394724927221 6.62312554193178 6.76343414003533 6.3108064269441 6.77984994409886 6.87340533044929 6.98782969711237 6.84438729389541 7.5581863868596 6.8856034043609 7.25128335636866 7.59535648310832 7.11745432597282 6.61207482064476 0.182953864207282 0.181167254491695 0.186343601129349 0.187787548602942 0.192696706550313 0.196254138867948 0.184476062426485 0.190431947596114 0.200645412486422 0.183651926263960 0.188105984674791 0.184284334365577 0.190113294698916 0.185091407432526 0.185048342586262 0.180140314061842 0.191406771548287 0.197615899455117 0.190930862535647 5 5 - 4069702 4070226 4069955 4069580 4071230 - gene protein_coding_gene TRUE TRUE AT5G12890.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G36780.1); similar to cyclo-DOPA 5-O-glucosyltransferase [Mirabilis jalapa] (GB:BAD91803.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.098644356352602 -1.18204243402879 0.263072434636805 1 0.709753698713704 14.7445606380237 -0.098644356352602 0.0420770266254497 AT5G49240_at 1.27524335350210 1.35597168467157 1.41501564271899 1.46467659968672 0.998006221885055 1.37397992916525 1.28921675844157 1.44267819794383 1.53500184857742 1.34347220907557 1.36263886880580 1.12436310662365 1.53356327214004 1.46052097474166 1.31145649612054 1.61353093367556 1.30191285923705 1.61571083097996 1.37455810099783 0.216927279458206 0.216461076362067 0.217793035680256 0.228113492124846 0.222637178144376 0.21838783135478 0.22823723417136 0.219378063495389 0.224666375458004 0.216518913269564 0.22113598252659 0.223303528897919 0.22282109019621 0.21822735105696 0.221155944158600 0.218585116195995 0.227729256617179 0.2297472393516 0.230414766606623 5 5|0 +|/ 19980680 19981497 19981114.4 19980160 19981577 + gene protein_coding_gene TRUE TRUE AT5G49240.1 APRR4 (PSEUDO-RESPONSE REGULATOR 4); transcription factor/ two-component response regulator member of Response Regulator: Pseudo Identical to Putative two-component response regulator-like APRR4 (Pseudo-response regulator 4) (APRR4) [Arabidopsis Thaliana] (GB:Q9FJ16); similar to ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G16857.2); similar to type-B response regulator [Catharanthus roseus] (GB:AAQ10678.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) -0.107390411083907 -1.18134876111266 0.263336135234470 1 0.709023600428253 2.74341832550562 -0.107390411083907 0.0721639848951806 AT5G56240_at 7.80627775606059 8.08464989868599 8.56842441685685 8.57880758338292 8.9454275436973 8.6940714409276 7.90595909604856 8.02173885520527 6.51341016176067 7.52121837593628 8.15525504567943 8.12433521070853 8.49407886874775 7.926172644148 7.75623847357818 8.44289407885664 8.32654454209383 8.06372270639765 7.83262255804635 0.148405489812991 0.145202443170825 0.146438103000539 0.145572676693501 0.146490382530237 0.152536252908561 0.147443227048220 0.143561581398255 0.189180963966609 0.153085663271434 0.146124271499696 0.140685350352088 0.144637326133439 0.151662585267080 0.153616236404757 0.146063538874442 0.146267636797726 0.150841089537098 0.145853006605729 5 5 - 22777393 22777883 22777659.727 22777029 22781742 - gene protein_coding_gene TRUE TRUE AT5G56240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56250.1); similar to Os04g0471400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053056.1) -0.105914511480833 -1.18116688351865 0.263405310808744 1 0.70883222536739 16.0507890212868 -0.105914511480833 0.0679520469729318 AT5G20500_at 10.7269013976792 10.6325650971013 11.0981813818441 11.2258497212855 10.9515621793216 10.7985951587016 10.2252280722588 10.1331298446584 9.92023169215567 9.99819679053585 11.1192429272597 11.0975845833370 10.6608295813176 10.8170910470211 11.1278582856094 10.6497230480870 10.3116965137976 10.6842014477948 9.9819106285515 0.086484148897719 0.0813440495047461 0.0810343495119308 0.081909127922111 0.083753901473097 0.0830480021848528 0.0842634609635513 0.0829616803747068 0.0888338714778486 0.0830218367145604 0.0810343495119308 0.0810343495119308 0.0810343495119308 0.0822734021362161 0.0846296459253552 0.0810343495119308 0.0854151359485002 0.0883845441282621 0.0832674395124585 5 5|0 +|/ 6938667 6939609 6939002.5 6938600 6939850 + gene protein_coding_gene TRUE TRUE AT5G20500.1 glutaredoxin, putative Identical to Glutaredoxin-C4 precursor (AtGrxC4) (GRXC4) [Arabidopsis Thaliana] (GB:Q8LFQ6;GB:Q9M457); similar to glutaredoxin, putative [Arabidopsis thaliana] (TAIR:AT1G77370.1); similar to glutaredoxin [Populus tremula x Populus tremuloides] (GB:AAL90750.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin, eukaryotic and viruses; (InterPro:IPR011899); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.0984073055926014 1.18116108397539 0.263407516851443 1 0.708826123340675 21.1116556731192 0.0984073055926014 0.0413450501310334 AT5G45510_at 10.5148780488252 10.7506854847591 10.8965243919803 10.8999430072014 10.7095069311805 10.5315962522493 9.79978889872187 9.72111023388658 10.0900375120569 9.4740500560879 10.7455981709553 10.5765760541321 10.1911978769244 10.4856673481327 10.4383020285667 10.4451467929474 10.4348988195435 10.7264091277268 9.17843781457466 0.112496574309398 0.0986865181999904 0.100267750324094 0.103418376600187 0.101691634053860 0.101888335930794 0.101436224148944 0.101043303770200 0.112865557150219 0.101771909962383 0.101549896672290 0.0995014627199365 0.0986865181999904 0.106108051585353 0.101236463053064 0.0999710444351126 0.0993133917804142 0.102142533212926 0.106501504759259 5 5 + 18465493 18466244 18465742.556 18461884 18466673 + gene protein_coding_gene TRUE TRUE AT5G45510.1|AT5G45510.2 leucine-rich repeat family protein|protein binding Identical to Probable disease resistance protein At5g45510 [Arabidopsis Thaliana] (GB:Q8VZC7;GB:Q9FHI5); similar to mob1/phocein family protein [Arabidopsis thaliana] (TAIR:AT4G19050.1); similar to Putative disease resistance protein At4g19050 (GB:O50052); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) 0.101238926095305 1.18062539594873 0.263611346030123 1 0.708262592472229 20.5211623169035 0.101238926095305 0.0529047596788121 AT5G38850_at 3.83155104066230 3.89084709993891 5.13635398453749 4.66023389636105 5.85280338988863 5.49324494028276 3.76142618045564 3.40330491587115 4.37852911734774 3.87654031034016 3.6146960356773 3.56988710555999 4.05101932001958 4.23646659404013 3.56930064313240 4.26195789372663 3.92753287618999 3.51391647811307 3.97286750807372 0.215694465832855 0.229561175636831 0.228197337212178 0.215552350984802 0.221799921577975 0.239267391952585 0.225401318684583 0.214150314036563 0.228868269714275 0.217150124425291 0.217764361686088 0.214150314036563 0.217739468824292 0.217270018374361 0.218923177969524 0.214496218297347 0.228443288653008 0.219877313170925 0.227752992162275 5 5 + 15575076 15575557 15575270.364 15572386 15575962 + gene protein_coding_gene TRUE TRUE AT5G38850.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G16870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G58120.1); similar to RLM1 (RESISTANCE TO LEPTOSPHAERIA MACULANS 1), ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G64070.1); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.128211268448805 -1.17943279095310 0.264065579898539 1 0.707008688462892 8.46325872944704 -0.128211268448805 0.120858517686323 AT5G03570_at 1.40568130757792 2.10637836126639 2.06227700519099 2.50832900449748 1.47508397827723 1.06048322948608 1.33848894799880 1.87796116030218 1.57777059410213 1.51746963703437 0.84050052415168 1.31309206199910 1.46771425322848 1.28179465023799 0.906652536431767 1.33224497314824 1.62298210625395 2.02040808371440 1.53438202835661 0.253973624043764 0.254746804172634 0.258083356154585 0.268194450134133 0.258327227695306 0.254546560445377 0.253227474678228 0.253227474678228 0.256306753762208 0.254945676166905 0.260842760543496 0.257356508867095 0.259106109860116 0.262945504011584 0.258761059824707 0.259958246788604 0.259554532959736 0.264219869927338 0.259003200804674 5 5|0 +|/ 905602 906514 906055.444 904488 906663 + gene protein_coding_gene TRUE TRUE AT5G03570.1 iron-responsive transporter-related similar to iron transporter-related [Arabidopsis thaliana] (TAIR:AT2G38460.1); similar to Solute carrier family 40 member 1 (Ferroportin-1) (Cell adhesion regulator) (CAR1) (GB:Q923U9); similar to Os06g0560000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057867.1); contains InterPro domain Ferroportin1; (InterPro:IPR009716) -0.16404537415323 -1.17938345607883 0.264084383656018 1 0.706956838262525 3.175025908563 -0.16404537415323 0.185811299277186 AT5G64160_at 5.22403181173417 5.52080542675639 5.94274576136172 5.82135158541175 6.46721803728724 6.25125730800167 4.75707339197931 5.04468788867018 5.19568705560436 4.77348999387057 5.77725142773695 6.05273760744916 5.51114939712756 6.15486623122209 5.40393302635529 5.78857247765265 5.63027380440238 5.66270978510081 4.9928302517303 0.215706213275200 0.213479291699306 0.204588924191443 0.209719440535294 0.214349192520783 0.208810418728021 0.200901649698566 0.213070980632735 0.221217998095481 0.210398170672827 0.213984981531166 0.207111696204149 0.209683128395849 0.210599264805814 0.209583993907939 0.213818779459620 0.21519894770203 0.201586227059496 0.204587684782229 5 5|0 +|/ 25688279 25689482 25689039.3 25688156 25689689 + gene protein_coding_gene TRUE TRUE AT5G64160.1 similar to Os02g0753200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048144.1) -0.111308677805744 -1.17831169611110 0.264493141263577 1 0.705830836135878 10.9961576447499 -0.111308677805744 0.0833851035236352 AT5G21110_at 1.61057136872422 1.23503682637125 1.56526719014882 1.41599358202745 0.951171290836829 1.38911929953753 1.15879965780823 1.50674005290200 1.17645399951254 1.70281420899481 1.2952460350355 1.11634283363306 1.61437421723166 1.23863382632120 1.33803520479 1.03486797984269 1.25225131899649 1.41248763476407 1.07404120496619 0.210085442722771 0.207996471193555 0.206513409854121 0.203471423957557 0.211949248957821 0.210168284079447 0.203542313424022 0.203818286179608 0.210033185680116 0.198986841148641 0.202948859830283 0.203850372610381 0.201429222749452 0.198986841148641 0.199535062811506 0.202010498491555 0.211569982782935 0.203713976409927 0.209743596621864 5 5|0 +|/ 7178645 7179062 7178905.4 7178618 7179089 + gene protein_coding_gene TRUE TRUE AT5G21110.1 contains domain ENGULFMENT AND CELL MOTILITY (PTHR12771); contains domain CELL MOTILITY PROTEIN RELATED (PTHR12771:SF3) -0.127257579933831 -1.17720229846809 0.264916779868809 1 0.70466609998425 2.65686225145355 -0.127257579933831 0.119416468185909 AT5G21070_at 6.22117122530585 6.88662421831842 6.64177981410134 7.09829321844138 7.8450665748918 7.05125602249875 6.79721478942482 7.01000651302204 5.66291507697716 5.47422701775962 7.0070821278248 6.64061514971405 6.92237783318134 6.96132178246976 6.73462548466696 6.627740593999 6.36909309142082 6.91853885758156 5.22554845100368 0.251143336714750 0.237758682895733 0.255854576187495 0.249405071300625 0.234327903170602 0.247756530013328 0.248472743229531 0.237579993330394 0.253608956396893 0.238215423971894 0.235560116255877 0.235475882130514 0.240085683486323 0.242427858375459 0.245243390742031 0.238948865717090 0.244565787380963 0.236275646259897 0.249083174465022 5 5|0 +|/ 7156451 7157445 7157026.8 7156175 7157769 + gene protein_coding_gene TRUE TRUE AT5G21070.1 similar to Os01g0277700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042737.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81147.1) -0.171826318423608 -1.17692835828574 0.265021470129927 1 0.704378621924177 13.0573788205109 -0.171826318423608 0.199324695699289 AT5G05760_at 5.01853243499121 4.74276323068369 5.9693850424537 5.56908572816737 6.22202214311339 6.40021755626692 4.12582962539191 3.96279245942074 3.72307748929474 4.14182766399577 4.46457062674290 4.12948325269764 4.193003332826 4.45721589637328 3.9370257805372 4.46853148542515 4.82110468043865 4.24828328114813 3.91250363312344 0.21586366318778 0.216202965752778 0.217081519420973 0.226666936183153 0.229330086179830 0.224771414202456 0.217114488620300 0.221432296203314 0.222632104687382 0.216296222033483 0.215626496527149 0.212894221003475 0.212894221003475 0.218363395167873 0.213441218774503 0.212894221003475 0.219478102553379 0.212894221003475 0.214096640090886 5 5|0 -|/ 1729127 1729868 1729462.6 1728894 1731022 - gene protein_coding_gene TRUE TRUE AT5G05760.1 SYP31 (T-SNARE SED 5); t-SNARE A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis Identical to Syntaxin-31 (AtSYP31) (AtSED5) (SYP31) [Arabidopsis Thaliana] (GB:Q9FFK1;GB:O65099); similar to SYP32 (syntaxin 32), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G24350.1); similar to Os01g0179200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042197.1); similar to hypothetical protein DDBDRAFT_0217989 [Dictyostelium discoideum AX4] (GB:XP_642671.1); similar to similar to syntaxin 5 [Schizosaccharomyces pombe] [Dictyostelium discoideum] (GB:AAS38833.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 0.115432019708907 1.17625068078662 0.265280594924347 1 0.703667669918607 9.38418113797525 0.115432019708907 0.0939326492277576 AT5G54600_at 11.1125341121564 11.0641010674266 11.2991865893988 11.1509382222346 11.8198883506848 11.3963872464179 11.5645559614717 11.3751242971626 11.4487117374445 11.8545206504332 12.5885674542326 12.6028255364606 12.1803009150878 12.2647419945690 12.8040722406713 12.3168006264398 11.9459339064913 12.1941505600387 11.7118322780897 0.0937877366935596 0.0900701481476924 0.094170751905595 0.0918010257625293 0.0914644854969879 0.101009888795994 0.0917388992468937 0.0915477978706067 0.097282004771584 0.0942297669618046 0.0908446163714789 0.0894202979154977 0.0935518965214346 0.0916009699679238 0.0899497134126985 0.0889843084166535 0.094723334654399 0.0929352774324674 0.0922206001508943 5 5|0 +|/ 22200276 22201594 22201182.4 22200204 22201793 + gene protein_coding_gene TRUE TRUE AT5G54600.1|AT5G54600.2 50S ribosomal protein L24, chloroplast (CL24) Identical to 50S ribosomal protein L24, chloroplast precursor (CL24) (RPL24) [Arabidopsis Thaliana] (GB:P92959;GB:Q9FIU4); similar to KOW domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23535.1); similar to 50S ribosomal protein L24, chloroplast precursor (CL24) (GB:P11893); contains InterPro domain Ribosomal protein L24/L26; (InterPro:IPR005825); contains InterPro domain KOW (Kyrpides, Ouzounis, Woese) motif; (InterPro:IPR006646); contains InterPro domain Ribosomal protein L24; (InterPro:IPR003256); contains InterPro domain Translation protein SH3-like; (InterPro:IPR008991); contains InterPro domain KOW; (InterPro:IPR005824) -0.111583387835712 -1.17572193591815 0.265482910975914 1 0.703113176695543 23.3647706689882 -0.111583387835712 0.084701530324395 AT5G22840_at 4.06993863330097 3.94744629267588 4.54938413446235 4.35171543237328 4.69012523933281 4.53814763782058 3.18234369775266 3.33754375497938 3.08992500935323 3.28142971843207 3.40339520410680 3.38058309925466 3.57173810573981 3.3409563617257 3.37378270070528 3.71458413859922 3.89799550575107 3.02283491474224 3.32007056687075 0.257643410357882 0.256420690470502 0.251087224148649 0.257822834835581 0.258420548208658 0.253742791526151 0.249789394717568 0.253756297492372 0.249828355763404 0.267590346014910 0.248254906732890 0.249154872693477 0.255166655799257 0.262955264549394 0.258581322556544 0.249357090351073 0.25136882050228 0.258255874305026 0.259782754900485 5 5 - 7631106 7631805 7631416.636 7630720 7633226 - gene protein_coding_gene TRUE TRUE AT5G22840.1 protein kinase family protein similar to SRPK4 (SER/ARG-RICH PROTEIN KINASE 4), kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT3G53030.1); similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G44850.1); similar to putative serine/ar (GB:AAS79595.1); similar to SRPK4 [Oryza sativa] (GB:AAL58968.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.101257259786013 -1.1738097838936 0.266215583232746 1 0.701109471250654 7.43018502886063 -0.101257259786013 0.0550687943775772 AT5G43890_at 1.36967949200214 1.20704835130377 1.75285200504948 1.46757779106888 1.69740295533745 1.40038924657228 1.69682185295356 1.29138791750902 2.08066348978531 1.37681603215187 1.09191469307047 1.88051919208575 1.81230598109938 1.59992439069365 1.73348263031981 1.19879835958326 1.18305549199276 1.93098303577657 1.81406331133156 0.192231897505960 0.194971120897664 0.197286673673059 0.197176218756821 0.194486658878446 0.191055816505245 0.196539744028625 0.193974955908123 0.202826581150388 0.196896602164409 0.194838531148988 0.190250683753488 0.191795267519990 0.192512840116666 0.197008530762558 0.204913041155703 0.195189222537872 0.194697778508882 0.198305369933464 5 5 - 17666088 17666598 17666357.273 17666084 17667358 - gene protein_coding_gene TRUE TRUE AT5G43890.1 SUPER1/YUCCA5 (SUPPRESSOR OF ER1); monooxygenase Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT4G28720.1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G04180.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I; FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Medicago truncatula] (GB:ABE89940.1); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (InterPro:IPR000103); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) -0.119445549087494 -1.17263868017981 0.266665097848322 1 0.699883505482933 3.14092190959988 -0.119445549087494 0.103893938422914 AT5G52190_at 8.08000561397122 8.1352071615899 8.3647932110206 8.68750064358314 9.3582405071288 8.84575264930078 8.12780418246403 8.5034256232321 7.46952129664102 7.43658016204734 8.20482928164535 8.10171681477936 8.28311943674127 8.16407233895947 8.9536727861014 8.36277877161749 8.36743424728478 8.42380581415964 7.44448759864096 0.191678126820372 0.181149102798332 0.190777427313827 0.186560542269080 0.189401782648987 0.205362041294062 0.185896600241417 0.184084498607605 0.192914975811628 0.191350726785524 0.187752433216069 0.181149102798332 0.188080692893981 0.193969708397024 0.183278462910494 0.183906743912467 0.197529103914264 0.196770726952654 0.187691028144971 5 5 - 21219063 21219616 21219389.364 21218956 21219769 - gene protein_coding_gene TRUE TRUE AT5G52190.1 sugar isomerase (SIS) domain-containing protein similar to Sugar isomerase (SIS) [Rhodospirillum rubrum ATCC 11170] (GB:YP_426455.1); similar to Os04g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053590.1); similar to OSIGBa0103M18.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66854.1); contains InterPro domain Sugar isomerase (SIS); (InterPro:IPR001347) -0.128658148287622 -1.17061474620213 0.267443372278946 1 0.697766927228926 16.4167787184634 -0.128658148287622 0.123697479852343 AT5G63840_at 8.92379516012569 9.26086846706842 9.58439509437587 9.60365696579139 9.79188433804334 9.18405590942335 9.103208219125 9.02250169392735 8.47895013810084 8.8480800966804 9.42115475980045 9.83173286417166 9.46795448666381 9.47327471856329 9.57377556844915 9.6407264082103 9.20093686151997 9.48667371463392 8.879724217592 0.120708109791488 0.117639011697588 0.123491159455158 0.120055812435402 0.116795552329741 0.126966555931296 0.117259295904213 0.116795552329741 0.135662127147135 0.120179151234073 0.118300441644408 0.116795552329741 0.117749659351591 0.124018561905948 0.117414774938518 0.117008282954015 0.129775368201064 0.127984306262338 0.121659528021764 5 5 + 25565439 25566091 25565823.455 25562282 25566425 + gene protein_coding_gene TRUE TRUE AT5G63840.1 RSW3 (RADIAL SWELLING 3); hydrolase, hydrolyzing O-glycosyl compounds radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme. similar to HGL1 (HETEROGLYCAN GLUCOSIDASE 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G23640.1); similar to alpha-glucosidase [Solanum tuberosum] (GB:CAA04707.1); similar to alpha glucosidase II [Solanum lycopersicum] (GB:CAE54480.1); similar to Glycoside hydrolase, family 31 [Medicago truncatula] (GB:ABE79280.1); contains InterPro domain Glycoside hydrolase, family 31; (InterPro:IPR000322) -0.127383272233873 -1.17057236011965 0.267459690349227 1 0.697722630361971 18.4331024760897 -0.127383272233873 0.121133119370180 AT5G53850_at 8.88426842326848 8.93265061174666 9.67928412530588 9.54365071653385 9.89222905036393 9.57871455571085 9.2835118222081 9.15398130822999 9.1113038752889 9.2747953741283 9.9456471635787 10.0107917070292 9.61773158379974 9.76085547913259 9.90285722556326 10.0386303157204 9.65885218534662 9.8942368559961 9.29987283708985 0.126383901248105 0.132813826345183 0.124597567240923 0.133654881932783 0.124678017614515 0.127779147117505 0.125722602133585 0.136012718240384 0.133566566563061 0.131661683746741 0.125820400304837 0.126826083646016 0.127956209770407 0.120962223977501 0.129883391997760 0.124209185255403 0.141655121238934 0.124095350296657 0.129682048174486 5 5|0 -|/ 21878392 21879233 21878776.444 21878223 21882199 - gene protein_coding_gene TRUE TRUE AT5G53850.1|AT5G53850.2|AT5G53850.3 haloacid dehalogenase-like hydrolase family protein similar to Os11g0484000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067908.1); similar to APAF1 interacting protein [Homo sapiens] (GB:AAH08440.1); contains InterPro domain Class II aldolase/adducin, N-terminal; (InterPro:IPR001303)|similar to Os11g0484000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067908.1); similar to Os01g0101200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041741.1); similar to P0402A09.8 [Oryza sativa (japonica cultivar-group)] (GB:BAB62625.1); contains InterPro domain Class II aldolase/adducin, N-terminal; (InterPro:IPR001303); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; (InterPro:IPR010041) -0.10352591089643 -1.16976237869084 0.267771673047659 1 0.696876366591798 18.9097151650159 -0.10352591089643 0.0637740482966663 AT5G52560_at 8.04471801361608 8.10193917727299 8.88374405409597 8.92699002333813 9.21588042433551 8.95124312798243 8.70613673420683 8.55210684784116 8.37359291182708 7.91168687167525 9.44680233985502 9.45477360084617 9.23943759267432 9.28565113348425 9.27232223980785 9.4510240998331 8.93827846907102 9.18859059231054 7.9887910403639 0.143704303755065 0.136936570350413 0.135654610289261 0.133918841613589 0.132945033881655 0.140215867315872 0.140549229222484 0.137261807335432 0.140711107268670 0.152752250157733 0.133711895548931 0.130939165140064 0.134348260382432 0.143128045149343 0.138988808057280 0.134250724514160 0.157429072518422 0.146420652990728 0.134513210087321 5 5 + 21350803 21351766 21351229.909 21347865 21352037 + gene protein_coding_gene TRUE TRUE AT5G52560.1 UDP-N-acetylglucosamine pyrophosphorylase-related This gene was shown to have sequence similarities with pea PsUSP gene, encoding an UDP-sugar pyrophosphorylase. similar to UDP-N-acetylglucosamine pyrophosphorylase-related [Arabidopsis thaliana] (TAIR:AT1G31070.2); similar to UDP-galactose/glucose pyrophosphorylase [Cucumis melo] (GB:ABD59006.1); similar to UDP-sugar pyrophospharylase [Pisum sativum] (GB:BAD66876.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71295.1); contains InterPro domain UTP--glucose-1-phosphate uridylyltransferase; (InterPro:IPR002618) 0.100602359448519 1.16831635614759 0.268329354052457 1 0.695366667688411 17.3608282752231 0.100602359448519 0.0544235814898876 AT5G03840_at 1.33049370463265 1.58722031191588 1.89583866124064 1.49086146061834 1.57975813726235 1.62080458076738 1.23980594775446 1.21729907344326 1.67532971452291 1.56910007628132 1.79489403363326 2.08718938242596 1.50465041067567 1.50460360354968 2.03648158118153 1.45607894392386 2.1952863432636 1.84516988585513 1.71428897334823 0.223420201693120 0.214908533285217 0.219281530332403 0.226733261611618 0.220883964514905 0.213985688591797 0.220374652689702 0.219665096126836 0.226783925093005 0.215060724507801 0.213985688591797 0.213985688591797 0.218538838412079 0.214473625142336 0.214265543966554 0.219129409650594 0.219232839293815 0.227233349196936 0.221022413961469 5 5|0 -|/ 1024813 1025708 1025140.222 1024640 1025811 - gene protein_coding_gene TRUE TRUE AT5G03840.1 TFL1 (TERMINAL FLOWER 1); phosphatidylethanolamine binding Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Identical to Protein TERMINAL FLOWER 1 (TFL1) [Arabidopsis Thaliana] (GB:P93003;GB:O04756;GB:O04757;GB:O04758); similar to ATC (ARABIDOPSIS THALIANA CENTRORADIALIS), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT2G27550.1); similar to BNTFL1-1 [Brassica napus] (GB:BAA33415.1); contains InterPro domain Phosphatidylethanolamine-binding protein; (InterPro:IPR001858); contains InterPro domain PEBP; (InterPro:IPR008914) 0.110307271730012 1.16775957813348 0.268544327836813 1 0.694785746838933 3.22323549859491 0.110307271730012 0.0833732855115919 AT5G49290_at 0.759910525507701 0.744641456523413 1.09672846529295 1.64471317082382 1.23257243885107 1.27163267371947 1.30546412756017 0.843138854845818 1.21576548571417 1.42328962244695 1.41175034197788 1.17368260074811 1.42530910522682 1.29308345892197 1.00830855100262 1.62188369947014 1.29363463903155 1.49864804948460 1.32497704592561 0.185781292420630 0.178567099168065 0.186285426446288 0.189275809604432 0.180737694119267 0.180096490181781 0.182341401023667 0.183166217945768 0.185130731729873 0.184064524365571 0.18278192128278 0.178567099168065 0.182390493109378 0.181272415572838 0.184711769501088 0.179852268269395 0.188241611321733 0.184389151028830 0.185205102346738 5 5 + 20000524 20000948 20000729.455 19997421 20001095 + gene protein_coding_gene TRUE TRUE AT5G49290.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G25470.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G74180.1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G74190.1); similar to Os04g0647900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054072.1); similar to H0821G03.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86057.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.128602534874167 1.16744839271729 0.268664536580867 1 0.694461158820475 2.44341601768815 0.128602534874167 0.124285389929480 AT5G60150_at 2.27314872353214 2.27128043407818 2.56013408415849 2.36017136796793 1.7009876921698 2.31015425372499 1.83221944819919 2.48526534261575 2.26553063254611 2.44386631381962 2.42063639682766 2.1986907819551 2.77164322795592 2.37672421465162 2.94142302634217 2.42824837461075 2.16672462766439 2.68212339165692 2.30887399633150 0.224372444255052 0.225410193320385 0.228017129199798 0.227559918962173 0.222239669912145 0.21928911041801 0.226950707750853 0.227006142329598 0.231659643326061 0.225218925912574 0.228491656143289 0.21928911041801 0.220186861735522 0.226149594599650 0.221593600946541 0.21928911041801 0.223161559088651 0.230920861930347 0.239432269389555 5 5|0 +|/ 24239511 24240114 24239792.111 24235437 24240471 + gene protein_coding_gene TRUE TRUE AT5G60150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53320.1); similar to unnamed protein product; emb|CAB67639.1 gene_id:F15L12.3 similar to unknown protein-related [Medicago truncatula] (GB:ABE81570.1) -0.146554557910316 -1.16676519949035 0.268928597899709 1 0.69374876957354 4.64302036969271 -0.146554557910316 0.158374936780485 AT5G10970_at 1.05767394606235 1.34077226350722 1.80044779784519 1.79205633966484 1.58845570157610 1.73961806516979 1.90221005032180 1.69853350736610 1.41395197904929 1.68182562836246 1.96907014943825 1.66601207957402 2.31716032167211 1.77164554251033 1.45018013651414 1.48757728089431 1.8809792376314 1.61566313527226 1.56558280669567 0.187272526299585 0.182973163793941 0.184314505710309 0.186787888889973 0.183064480694385 0.182381154833673 0.180434021096627 0.193594189835365 0.183115883032495 0.185472743566777 0.188162399774965 0.181438592896252 0.186503386897962 0.189169550321964 0.183534291583394 0.185502958574936 0.189640074237072 0.182877481351419 0.184010533467929 5 5 + 3469500 3469928 3469698.909 3469269 3470087 + gene protein_coding_gene TRUE TRUE AT5G10970.1 zinc finger (C2H2 type) family protein similar to ZFP3 (ZINC FINGER PROTEIN 3), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G25160.1); similar to zinc finger protein (GB:AAA87300.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.103894829574475 1.16658303551399 0.268999040659102 1 0.693558873984051 3.27675735400959 0.103894829574475 0.0657947523676747 AT5G60890_at 4.34029781710053 4.31232293240225 6.14681266428272 6.06504697217658 6.54830773596425 6.55370417591437 7.91736944487205 7.77962847108974 5.84852764148489 6.90453089570018 8.23107585539642 8.40095345116497 8.65975827972034 8.01305696367894 8.1741413610804 8.29595458678232 7.97975128711667 8.41543094658496 7.11177870300673 0.230092952306840 0.242735478429029 0.222210673760482 0.222890925014588 0.225001190731305 0.237951352715681 0.219848695349555 0.216747918253020 0.226987057475324 0.224683570632566 0.220139047255486 0.221176871319890 0.216747918253020 0.224606678386427 0.219318415622709 0.217535593218686 0.224542103776313 0.222539571342938 0.217995808416113 5 5 + 24512916 24513360 24513139.091 24511917 24513577 + gene protein_coding_gene TRUE TRUE AT5G60890.1 ATR1 (ALTERED TRYPTOPHAN REGULATION); DNA binding / kinase/ transcription factor Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. similar to MYB51 (myb domain protein 51), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G18570.1); similar to Os04g0461000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052993.1); similar to Os08g0433400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061874.1); similar to H0219H12.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67454.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0946931419834365 -1.16606191338173 0.269200638624722 1 0.693015757281239 13.6543751541443 -0.0946931419834365 0.028155265198478 AT5G37590_at 2.23659664839338 2.63419179687374 3.33012204718819 2.95893961518382 2.61321825251398 2.89898465058712 2.32648628538322 2.62494140364481 2.20518735267870 2.04395165654955 2.32266143428581 2.42547389901458 2.7506829039723 2.70869414392741 1.77127875281997 2.12249353628449 2.60116920249001 2.22346769528212 1.96654412936962 0.212533695067891 0.204467520902767 0.207210662759698 0.207062245004963 0.209651886090558 0.206546921967442 0.204153071326742 0.210191474048573 0.209125805416313 0.216141919076037 0.213552388775335 0.206898949858627 0.206220897955992 0.212200156241294 0.213850742811862 0.207635368159818 0.212456168881615 0.230677009140948 0.212459000985794 5 5|0 -|/ 14947915 14949352 14948672.75 14947728 14950017 - gene protein_coding_gene TRUE TRUE AT5G37590.1 binding similar to SPY (SPINDLY), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11540.1); similar to Krm protein [Lotus japonicus] (GB:CAA73365.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.125429763088244 1.16571259543461 0.269335840057207 1 0.692651798441974 4.92175237524214 0.125429763088244 0.118209914428745 AT5G17440_at 6.25005156067042 6.03296586988032 7.16077743478495 7.17059764660787 7.94536809968091 7.55232524386264 6.09319573213857 5.6249750789388 5.84469387335345 6.19098991317274 6.94935999786633 6.96028898133225 7.27728443269108 7.38830336518534 6.81968640771339 7.5484922452232 7.13656750930094 7.12389493166553 6.79159034997446 0.189781521927088 0.194189673076553 0.194383321720986 0.192927742933152 0.195123443335531 0.192636106645922 0.195901469466711 0.200190159108551 0.210459557810023 0.202960597941103 0.196475145094254 0.187413531764322 0.196484998767986 0.198829929264249 0.187862246405424 0.190648909101174 0.205785980757113 0.197319104256041 0.187263192774209 5 5|0 +|/ 5752032 5753252 5752823.625 5749764 5753645 + gene protein_coding_gene TRUE TRUE AT5G17440.1 LUC7 N_terminus domain-containing protein similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to pre-mRNA processing factor [Triticum aestivum] (GB:AAY84869.1); similar to Os03g0843500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051864.1); contains InterPro domain LUC7 related; (InterPro:IPR004882) 0.122563937792275 1.16539311917978 0.269459538201146 1 0.692319004077942 13.4419034730068 0.122563937792275 0.112277127074719 AT5G26060_at 1.99882694503305 1.33852868235242 2.30844093178496 1.67512149528328 1.67238773737442 2.12310356721963 1.86346406111144 1.95460760685886 2.42916049968348 2.06143174525286 2.08962540940416 2.08483929260581 1.34273830242187 1.53615913490139 1.84086548931804 2.00746669332887 1.80648100385265 1.92240323815249 1.49261890277913 0.201512717366533 0.206267703365492 0.203383942339175 0.206274034553289 0.201115514923721 0.206779297422663 0.205388976479881 0.2077093525153 0.20552064135291 0.214796548629988 0.201115514923721 0.201115514923721 0.210539718515206 0.204330233977554 0.209426297040362 0.20649117549483 0.206135270188894 0.201115514923721 0.206867875085878 5 5 - 9105106 9105421 9105253.727 9104850 9105527 - gene protein_coding_gene TRUE TRUE AT5G26060.1 S1 self-incompatibility protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11820.1); contains InterPro domain Plant self-incompatibility S1; (InterPro:IPR010264) -0.157003675005811 -1.16487447697615 0.269660446640784 1 0.691778887659655 3.77842314657891 -0.157003675005811 0.177204866946326 AT5G65500_at 2.64039432620740 2.66656928473463 3.19608200438599 2.99441173228946 2.45321049517305 2.91047472919098 2.53057827324601 2.35683526196446 2.59807191931423 2.75715338029398 2.40027286800141 2.66186099502258 2.64216374639426 3.11972866638202 3.24108776902637 2.36471978012656 3.03205758318623 2.66291203473131 2.60696173103603 0.205052374963702 0.200432430222856 0.19600960596325 0.197259452846782 0.198984659394655 0.201608792247798 0.198942458040124 0.202745708351697 0.200409317969164 0.198181711807110 0.201420134964648 0.19459671427936 0.207384783168417 0.199944852527055 0.200743052023181 0.196069226942027 0.205152654364315 0.217809130763322 0.196746266023765 5 5 - 26198319 26198925 26198595.909 26198319 26201223 - gene protein_coding_gene TRUE TRUE AT5G65500.1 protein kinase family protein similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49060.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain U box; (InterPro:IPR003613) -0.113330398862217 -1.16445017059443 0.269824899443719 1 0.6913371479745 5.42840090035246 -0.113330398862217 0.0916754106009526 AT5G04030_at 1.6510423025012 1.41952549696994 2.07497724735036 1.9292301467222 1.51114066486579 1.59727801755162 1.90673021000587 1.85228999365315 1.77175603410336 1.86438912409938 1.7986538561829 1.66084142359676 1.8014495135912 1.61070174191121 1.99929809094628 1.3761412185946 1.89479018872846 1.93885607457139 1.65072999473619 0.173088626326143 0.180438160160370 0.17427767116768 0.172247913207745 0.180098750597413 0.177026306933781 0.172941727782797 0.176162791771394 0.17720359482648 0.178218033705522 0.170750604469136 0.180650505595262 0.178720243027712 0.180746662678507 0.170492162377744 0.175971662954116 0.17406724924771 0.169488780982146 0.174723613000112 5 5 - 1088463 1088665 1088551.818 1088461 1088691 - gene protein_coding_gene TRUE TRUE AT5G04030.1 unknown protein -0.099135998438529 -1.16350017071839 0.270193386623965 1 0.690348556456603 3.50396837553335 -0.099135998438529 0.0505205902896757 AT5G39990_at 5.92849588211687 6.5194758670006 7.06472289520749 6.9514389066103 7.34526343237621 6.94749185171693 5.73100460646702 5.89476930904974 4.15181043393999 4.25033881842454 5.65380741853389 5.95478327146821 5.60004336867813 5.64046883481019 5.51588499659675 5.6031283840884 4.98954455021609 5.28510986327362 4.5471762076418 0.241291629232884 0.236572832586139 0.25002676007521 0.25168510204425 0.234955383326961 0.25770010920813 0.244696312369955 0.242005567839762 0.257293143255620 0.25079746944729 0.245166657451697 0.235980807256564 0.24038177682984 0.259205038726076 0.237859769436856 0.239840394074509 0.258254146635909 0.262434461749419 0.248929953062206 5 5|0 +|/ 16022700 16023530 16023262 16021509 16023968 + gene protein_coding_gene TRUE TRUE AT5G39990.1 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G15050.1); similar to BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Ae (GB:CAH05144.1); similar to Os12g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067391.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) 0.130006501270154 1.16330785760292 0.270268029405939 1 0.690148505213082 11.4712269217983 0.130006501270154 0.128005683235397 AT5G45930_at 9.00210021111228 9.07281142609741 8.51291316280288 8.68151617553372 9.50327917709503 9.35071860288611 8.95107689186531 8.9077572255291 8.89072506256498 8.8474763996753 10.1190771272639 10.4340362210497 9.78770231984006 10.0472262084671 10.6692695569763 10.0707145524736 9.4122969115051 9.94791022895875 8.62524761226143 0.123740705143859 0.115319226462879 0.123165434163423 0.120826419857007 0.120198468467155 0.110395273676826 0.125486189436441 0.111845997949922 0.122403708629820 0.11737539159243 0.116248012181725 0.111893365443467 0.112211736073327 0.113766049237478 0.118737240081318 0.111798144369415 0.111475657166762 0.110608625148794 0.120229012972664 5 5 + 18646226 18646742 18646433 18645234 18646924 + gene protein_coding_gene TRUE TRUE AT5G45930.1 CHLI2; magnesium chelatase encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. similar to CHLI1 (CHLORINA 42), magnesium chelatase [Arabidopsis thaliana] (TAIR:AT4G18480.1); similar to Magnesium-chelatase subunit chlI, chloroplast precursor (Mg-protoporphyrin IX chelatase) (GB:P93162); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Magnesium chelatase, ChlI subunit; (InterPro:IPR000523); contains InterPro domain Magnesium chelatase ATPase subunit I; (InterPro:IPR011775) -0.0970053011729388 -1.16291252158926 0.270421522676544 1 0.689737340473787 18.4221943586073 -0.0970053011729388 0.0418843678076359 AT5G24740_at 5.68692282458885 5.4868231100719 6.83218987749572 6.37119644389314 6.76804367236641 6.43508762122711 5.80696725421334 5.43924563881589 5.14194577060305 5.44052328661516 6.20001352712636 5.96807677323945 5.85329520540995 6.16476027381964 6.09024982692077 6.76835256025224 5.68851750524632 5.79846591461502 5.24505741290879 0.187306338515552 0.178179656599383 0.180632177251666 0.178320764076608 0.178605298976352 0.190701786652068 0.191904076051947 0.184563405895039 0.190538944256248 0.192797287844398 0.185464769724456 0.180020975475803 0.181350674707486 0.188102927531402 0.184183829667418 0.181033264603119 0.194420548901409 0.196480427619527 0.187088367028165 5 5 - 8470097 8470632 8470429 8469954 8489706 - gene protein_coding_gene TRUE TRUE AT5G24740.1 similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48090.2); similar to hypothetical protein MtrDRAFT_AC135799g29v1 [Medicago truncatula] (GB:ABE82166.1); contains InterPro domain Vacuolar protein sorting-associated protein; (InterPro:IPR009543) -0.126641058106432 -1.15895558974163 0.271961618138586 1 0.685627800886376 11.7744638578529 -0.126641058106432 0.122200827703925 AT5G66950_at 6.52083636172312 6.96538017928063 7.56400072263564 7.33620906871049 7.93311966705146 7.8584686425225 6.21162758032483 6.79900087269205 6.11641328154029 5.72880445820257 7.25242822714462 7.78230270864541 7.41373909868567 7.31476376485928 6.73616203501564 7.50905238507837 7.072160204538 6.58769034654836 5.89723984250798 0.24205590532804 0.237851917585382 0.253699662804899 0.252024122602380 0.237851917585382 0.240351547559798 0.237851917585382 0.23841906081484 0.256937599910597 0.247030564825295 0.258162028686864 0.237851917585382 0.241611734498540 0.254999776205637 0.248414129878226 0.248008919739527 0.254356861073256 0.243325745143809 0.248924160097822 5 5 + 26752667 26753124 26752860.727 26750115 26753372 + gene protein_coding_gene TRUE TRUE AT5G66950.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23520.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37100.1); similar to Os03g0765800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051377.1); similar to Os12g0590900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067168.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99048.1); contains domain MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) (PTHR14237); contains domain PLP-dependent transferases (SSF53383); contains domain no description (G3D.3.40.640.10) 0.132535215209168 1.15845513056825 0.272156893607636 1 0.685108795471623 13.7099253237333 0.132535215209168 0.134057441035328 AT5G12460_at 1.63053697203618 1.40150627776219 1.62670084155239 1.53209332415543 1.14541586806935 1.83891916129894 1.20146654081627 1.81597359060686 2.00117880029242 1.44982713237811 1.89561352648023 1.40984920837089 1.85675389407454 1.58803935090561 1.50096482360167 1.68501291812386 1.57944596493909 1.84796741453448 1.8253818980158 0.225616315909859 0.234812588653472 0.224043003324528 0.227027343637525 0.234339051362303 0.227508444107457 0.235027195459213 0.231663294708242 0.23306425299791 0.230683878809031 0.232902053285045 0.223569734201154 0.233554228944489 0.22467737156686 0.231379140123863 0.238442421003568 0.231995389615169 0.231521899682512 0.241650352918374 5 5 + 4043954 4044370 4044152.364 4043060 4044586 + gene protein_coding_gene TRUE TRUE AT5G12460.1 similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT2G37730.1); similar to Protein of unknown function DUF604 [Medicago truncatula] (GB:ABE81721.1); contains InterPro domain Protein of unknown function DUF604; (InterPro:IPR006740) -0.149626057541432 -1.15747738384753 0.272538720545747 1 0.68409530480771 3.23870248763265 -0.149626057541432 0.165985619922988 AT5G48130_at 0.697680349425807 1.06107080242015 1.32798000492786 1.08468746889346 1.19022338194569 1.17641473753742 0.736067420380997 0.949260880093032 0.949394263964369 1.36522379271093 1.83238595772835 0.904108117542463 1.07954812113465 1.32584018939201 0.731457465418995 1.12600313363368 1.12181920497440 1.01916191878549 1.03363175632064 0.212703487661596 0.20954475004805 0.209440541319545 0.209451212278994 0.205980998682657 0.211709678213472 0.209253995272760 0.208325507447801 0.211921247027613 0.20610236392013 0.210606115748704 0.211463651097288 0.212513820258824 0.208944193808757 0.208323854805221 0.208052649534228 0.217928339687234 0.210826314181404 0.206796404344945 5 5 + 19535117 19535590 19535317.364 19533328 19535739 + gene protein_coding_gene TRUE TRUE AT5G48130.1 phototropic-responsive NPH3 family protein similar to signal transducer [Arabidopsis thaliana] (TAIR:AT5G67385.1); similar to photoreceptor-interacting protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAC82963.1); similar to Os07g0584200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060119.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) 0.109566647600754 1.156417794692 0.272952982616529 1 0.682997711818343 2.15723502299050 0.109566647600754 0.0842273261315439 AT5G49870_at 2.00992736756612 1.64297162542950 2.12254078062525 2.30970468579835 1.72022957815746 2.37181728043842 1.96530802177543 2.18321679990711 2.51138867783217 2.28566115928872 2.33649446243283 2.27871850348114 2.40770072593868 2.32424899996982 2.32773999094941 2.17918723443113 2.37182334018141 2.13438860677785 2.22232318797431 0.186537106647998 0.189813861537827 0.182999576987721 0.192764627022575 0.185104923106979 0.187514043854423 0.182857867023965 0.190061826703570 0.191841953042869 0.197841633485967 0.190941919970491 0.198412724416751 0.184815799677165 0.184888867420772 0.182857867023965 0.189390697971004 0.198170244867436 0.189365691830333 0.188037162220022 5 5|0 -|/ 20287769 20288248 20288039.4 20287418 20289774 - gene protein_coding_gene TRUE TRUE AT5G49870.1 jacalin lectin family protein similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT5G49850.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Jacalin-related lectin; (InterPro:IPR001229) -0.134634227512734 -1.15616074186486 0.273053555604679 1 0.682731554220945 4.35812888815488 -0.134634227512734 0.138631542475318 AT5G28810_at 1.87644418948748 1.58874483537086 1.99596705888957 1.69984294172066 1.61878590659158 1.92602760283936 1.39228413888428 1.69492417414719 1.83004695812259 2.21104390574693 1.99555580161825 2.01040091811371 2.07217040519363 1.80899792327080 2.02433923460334 1.78880003628827 1.87543824909578 2.18920076374589 2.19156903081328 0.145703362674818 0.139979651728622 0.136733918442518 0.142311539387488 0.138552242063122 0.141010155001967 0.144857042987485 0.1411310377658 0.139609688274707 0.144324113263075 0.137097395391760 0.141758053768305 0.147638306711370 0.137986058273540 0.139995245562554 0.143198471045056 0.143736493685599 0.143066829072121 0.156693386024220 5 0|5 /|+ 10826458 10826555 10826488.9 10824437 10826579 + gene protein_coding_gene TRUE TRUE AT5G28810.1 similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT4G08430.1); similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT5G45570.1); similar to hypothetical protein 27.t00096 [Brassica oleracea] (GB:ABD65084.1); similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD65034.1) -0.117509076328827 -1.15613784301651 0.273062516283480 1 0.682707846474807 3.74821071335078 -0.117509076328827 0.103319411606265 AT5G48070_at 2.00049440865333 1.65094390508755 1.88428301840875 1.97021189493052 1.78236024554211 1.83517965385906 1.45167382769110 2.09228705048580 2.49662730467110 2.10884783839967 2.15847396198903 2.14299492566591 2.26504583834562 2.28621594738242 2.34604318680773 2.11452343278575 2.33893256027169 2.56436906974156 2.14219320863401 0.184878496284215 0.169154428066979 0.170804573729876 0.173581962195141 0.180727304010102 0.17083627673246 0.175048578695640 0.172228316100866 0.181232930238425 0.174082380653632 0.172417187951105 0.171048671438771 0.180418831701027 0.170357232547068 0.172868928492053 0.170481200933445 0.175866797460182 0.178307177321217 0.169070466407668 5 5 + 19499900 19500321 19500165.455 19499332 19500678 + gene protein_coding_gene TRUE TRUE AT5G48070.1 ATXTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds putative xyloglucan endotransglycosylase/hydrolase, expressed primarily in the stele of mature non-elongating regions of both the main and the lateral root. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Identical to Xyloglucan endotransglucosylase/hydrolase protein 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) (XTH20) [Arabidopsis Thaliana] (GB:Q9FI31;GB:Q56Y69); similar to ATXTH18/XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G30280.1); similar to ATXTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT1G65310.1); similar to xyloglucan endotransglucosylase/hydrolase 2 [Cucumis melo] (GB:ABI94062.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) -0.128384298223326 -1.15108345416568 0.275046023398644 1 0.677483633121268 4.09657807521993 -0.128384298223326 0.127491441205730 AT5G20660_at 9.22092454688362 9.27700132165068 9.82540633020188 9.67076042551055 9.85718599495701 9.64690036882847 8.86325686869413 8.75972883470213 9.06884773967974 9.19788071612809 9.8366138319009 9.75777089433313 9.61594737762196 9.62261552481283 9.57976210925144 9.47643123147526 9.60005479983698 9.7976059537184 9.09392205447761 0.114802951114133 0.114593250327249 0.119288403190421 0.112785529082845 0.105437056466510 0.111289378829206 0.116530364905668 0.115378419607273 0.118413467139029 0.105849326321705 0.107767672922714 0.108824350824057 0.109005393257668 0.122365296250956 0.118911479234299 0.108538067620358 0.115835105336194 0.112627351073073 0.108518429452884 5 5 + 6990492 6990884 6990722.818 6986237 6991045 + gene protein_coding_gene TRUE TRUE AT5G20660.1 24 kDa vacuolar protein, putative similar to peptidase [Arabidopsis thaliana] (TAIR:AT1G67420.1); similar to OSJNBb0061C13.16 [Oryza sativa (japonica cultivar-group)] (GB:CAE05634.1); similar to 24 kDa vacuolar protein VP24 [Ipomoea batatas] (GB:BAA83809.1); contains InterPro domain Peptidase M28; (InterPro:IPR007484) -0.097727509804172 -1.14986703379790 0.275525066064619 1 0.676228937757545 18.7806791124939 -0.097727509804172 0.0495547276685511 AT5G16140_at 5.20101832169263 5.24097155229232 6.44339682103605 5.77048686808180 6.87719066877268 6.27644111422792 6.11048738989423 5.25332485349356 4.05410854590006 5.04066172435893 6.16419642757313 6.8129747642984 5.8353633514688 6.05812943822444 6.97154890025824 6.68915285924942 6.68444379130312 5.88455334740354 5.61632549852661 0.233901875138684 0.218491932135905 0.233351098424048 0.225206060585941 0.231255688661423 0.240448711508745 0.219987251197213 0.226122247115355 0.263210171505786 0.232750548662068 0.218491932135905 0.219096957589842 0.218491932135905 0.218601640999699 0.226647977270147 0.227336890305257 0.229196592518701 0.225601485577459 0.224382736949591 5 5|0 -|/ 5270367 5271172 5270875 5270177 5271924 - gene protein_coding_gene TRUE TRUE AT5G16140.1|AT5G16140.2 peptidyl-tRNA hydrolase family protein similar to peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G38290.1); similar to Peptidyl-tRNA hydrolase [Medicago truncatula] (GB:ABE85649.1); contains InterPro domain Peptidyl-tRNA hydrolase; (InterPro:IPR001328) 0.177420416144665 1.14899000271107 0.275870857385296 1 0.675324936546983 11.5422866734702 0.177420416144665 0.215453522545807 AT5G53870_at 2.31747102768099 4.33622031048402 3.66768965855944 4.19999360662174 2.86490791397769 3.01734866410419 2.94820494037149 5.0036061166929 2.57053138779520 3.16698702056194 3.03757044777807 2.04615953840669 4.49269427255574 5.03821003995191 1.95029708888927 2.42415293972254 4.19060531170727 3.49049489700382 2.66045863054707 0.312027511584333 0.311956810606866 0.329712505432845 0.321968406955292 0.307441363215376 0.324352170059748 0.314464640465191 0.314802893217528 0.328528825924831 0.311948386854832 0.307441363215376 0.310181639342038 0.324513593523722 0.342172948935912 0.307441363215376 0.307441363215376 0.334538492430033 0.317240071056667 0.314428019163828 5 5 - 21887259 21887335 21887292.545 21887090 21888510 - gene protein_coding_gene TRUE TRUE AT5G53870.1 plastocyanin-like domain-containing protein similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G27520.1); similar to putative early nodulin-like 2 predicted GPI-anchored protein [Trifolium pratense] (GB:BAE71287.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) -0.369994245493049 -1.14876731432288 0.275958711821125 1 0.675095483660133 6.61097965312988 -0.369994245493049 0.50769084026104 AT5G59210_at 7.55492946402047 7.51185688727992 8.23792655217262 8.11904281559965 8.51068323778194 8.0215068890189 7.31460141736563 7.27295166057894 7.49587737534746 7.10295235536703 8.17046674017423 8.20868370492519 7.94088687452115 8.43626229136147 8.19362007264779 8.0622342114296 7.85550079169959 8.29280202234925 7.22427802447468 0.147087996405232 0.145517205184724 0.150716050093740 0.149332492126681 0.148067943008151 0.152388400483008 0.148978530950526 0.156456726534552 0.157319304731452 0.150899164344703 0.141776600429176 0.150009142774321 0.155373317867008 0.149878727415184 0.145350177301479 0.145262457823614 0.157380441500044 0.150417369802904 0.152181035607051 5 0|5 /|- 23908030 23908638 23908347.714 23907862 23910891 - gene protein_coding_gene TRUE TRUE AT5G59210.1|AT5G59210.2 myosin heavy chain-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12150.1); similar to t-snare [Medicago truncatula] (GB:ABD33148.1); contains InterPro domain t-snare; (InterPro:IPR010989) -0.110200269490009 -1.14861583910781 0.276018483923214 1 0.674939426491903 15.5276505356614 -0.110200269490009 0.0877332176104838 AT5G57570_at 2.43340380407888 1.99926151360548 2.42789330693108 2.44382874370409 2.28274006816519 2.48809176309182 2.26062534230104 2.47601860419966 2.02335694322504 2.51236309668894 2.72972268352494 2.4464837666828 2.44927064970486 2.81744453943576 2.68228241468314 2.11889568177425 2.82025797552749 2.41061499071569 2.62624387810911 0.223346001010597 0.220775402399260 0.225586149674308 0.22554989784927 0.226131416616344 0.222353101387312 0.22236937892955 0.221868296220714 0.219985325918011 0.228563638743589 0.228908557291235 0.220042069203667 0.223392822639333 0.224025753760491 0.218309859481225 0.22225487006044 0.226700969452899 0.217283624327829 0.223074195371625 5 5 - 23331010 23331389 23331227.778 23331010 23331420 - gene protein_coding_gene TRUE TRUE AT5G57570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57640.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84332.1); similar to Os03g0647400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050772.1); similar to Os07g0158400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058928.1); contains InterPro domain GCK; (InterPro:IPR012891) -0.111556395840501 -1.14851476733197 0.276058372463924 1 0.674835306119425 4.82482934014156 -0.111556395840501 0.0911288577663744 AT5G03150_at 2.85899408998868 2.60806424750961 2.43330345377029 2.87685435051752 2.97481276811059 3.36620098906104 2.48126415217468 2.61025955209239 3.4720949655591 3.39584224860164 4.59614090181715 4.51856311409737 4.41789923405893 4.86038427186496 4.10953013541771 4.60911560666218 3.56500145985815 4.73173053545405 4.49857982777278 0.223303009166409 0.219552606805207 0.222195463365549 0.215834208514145 0.225071090862574 0.219780770407916 0.221354473916897 0.216586902157594 0.227678445718152 0.22589991650911 0.224367946125386 0.220118356257453 0.22085299690007 0.229927837344276 0.219624982528568 0.215834208514145 0.224370938897615 0.217623544197238 0.222252875752440 5 5 + 748104 748648 748382.727 745643 749004 + gene protein_coding_gene TRUE TRUE AT5G03150.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G45260.1); similar to Zinc finger, C2H2-type [Medicago truncatula] (GB:ABE83457.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.121284126782815 -1.14818628870297 0.276188039512009 1 0.674496967843354 6.88366153609393 -0.121284126782815 0.113417198255986 AT5G44000_at 9.12077654626416 9.10804861046575 10.0439502664561 9.91862002709852 10.1843423708664 9.9413421569796 9.61737199534675 9.33359678742392 9.11461805717761 9.13648126546932 9.86833793198496 9.81740216957623 9.7259806243787 10.0247943053371 9.78512423157279 10.1824760482569 10.0997864600772 10.0628614124006 8.90299917833048 0.108420691865104 0.106677204913657 0.116406020875386 0.109260892935897 0.104647085559920 0.109972141529889 0.104647085559920 0.109209660142020 0.109436098243172 0.113856706768400 0.108695635284713 0.107550154406186 0.108523596689172 0.107945374907194 0.107041020901585 0.107678814019742 0.108203025596717 0.107005653772535 0.115223360111698 5 5|0 -|/ 17719500 17720456 17719733.667 17719317 17721190 - gene protein_coding_gene TRUE TRUE AT5G44000.1 glutathione S-transferase C-terminal domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19880.1); similar to Os02g0814800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048496.1); similar to Glutathione S-transferase-like [Anabaena variabilis ATCC 29413] (GB:YP_322177.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) 0.102967942533511 1.14728646949451 0.276543487282929 1 0.673570516871765 19.1571118775829 0.102967942533511 0.068229891173371 AT5G39930_at 0.973973386889024 1.09863974038138 1.48883944951771 1.83595655375589 0.528642153167246 0.911840156290103 0.598746880560878 1.15135118625196 1.30733436906528 1.53021046980499 0.757463784500163 0.850409930562717 1.20994535787449 1.15296133620845 0.881467492016103 1.18846073551795 0.949463139047674 1.38643498183664 1.34281269064542 0.210679722773456 0.216801393346630 0.210679722773456 0.213887011215922 0.214774384501647 0.210679722773456 0.215566103420446 0.213612692094600 0.218863511069854 0.21389504042827 0.210679722773456 0.211053943004355 0.210679722773456 0.214416854780157 0.217389029246110 0.212100598198560 0.220425806349019 0.210679722773456 0.210679722773456 5 0|5 /|- 16002723 16003242 16002948.778 16002477 16004468 - gene protein_coding_gene TRUE TRUE AT5G39930.1 similar to pre-mRNA cleavage complex family protein [Arabidopsis thaliana] (TAIR:AT3G04680.2); similar to Pre-mRNA cleavage complex II Clp1 [Medicago truncatula] (GB:ABE91353.1); contains InterPro domain Pre-mRNA cleavage complex II Clp1; (InterPro:IPR010655) -0.130333509970022 -1.14509137415578 0.277412096298152 1 0.671312774749643 2.29376286561881 -0.130333509970022 0.132727874393541 AT5G01470_at 4.26163931752318 4.10257205058476 5.19887249776737 5.31244707292796 5.52247189952366 5.67963696073343 4.57054821304714 4.54177931158817 4.01839661940518 3.93104959708751 4.92044846436351 4.46077779294312 5.254620438416 4.3497464978173 4.37488443625219 4.60816739563829 4.96419953616102 4.25227001977171 4.50864787353612 0.222816838902018 0.223072360731657 0.219543292807796 0.223859869044867 0.225395158152330 0.221566380789225 0.230788231060622 0.218594333951906 0.232073688625989 0.221689632764499 0.222825062774667 0.223416908467903 0.224766455582282 0.233313568865524 0.219728321540145 0.220574163869030 0.225555585680941 0.218594333951906 0.218594333951906 5 5|0 +|/ 191483 192379 191971.7 190927 192610 + gene protein_coding_gene TRUE TRUE AT5G01470.1|AT5G01470.2 similar to Os03g0826700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051766.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99651.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain METHYLTRANSFERASE (PTHR10108) -0.0958790014765927 -1.14462304480682 0.277597691782677 1 0.670831506050453 9.29916459180196 -0.0958790014765927 0.043687335641069 AT5G06750_at 7.30421844392643 7.76710162820744 8.3246662639061 8.53807127306941 7.5950405853678 6.62345209866336 4.93226404097656 4.73856899745226 5.62482527058722 4.49176992962148 6.19991049473464 6.07218458837008 5.81346731309977 5.59344710906683 5.3343453586172 5.52705411403202 5.51413461313838 6.01171519516713 4.69550768170774 0.269314396136139 0.280234736795224 0.272513978377668 0.286875109218381 0.269690529291496 0.274092566849090 0.268289966521781 0.271842368069321 0.2779060153064 0.269204577855970 0.266310256945586 0.264564591978395 0.267858614760839 0.282483092865165 0.264647078146935 0.265618644736306 0.277243651956256 0.269231409222985 0.264564591978395 5 5|0 -|/ 2086411 2087236 2086835.4 2086267 2088529 - gene protein_coding_gene TRUE TRUE AT5G06750.1 protein phosphatase 2C family protein / PP2C family protein similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT5G66080.1); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G51370.1); similar to OSJNBa0088A01.23 [Oryza sativa (japonica cultivar-group)] (GB:CAD41383.2); similar to protein phosphatase 2c-like protein [Thellun (GB:AAM19705.1); similar to Os02g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047766.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.163219994403325 1.14421408811002 0.277759837588886 1 0.670411373156234 12.3257479042380 0.163219994403325 0.192806855822974 AT5G05080_at 9.27241178666931 9.18651645331071 9.69187703883702 9.68707711120207 10.0411887367039 9.956109348446 9.2247074050484 9.18061515868943 9.43099219660477 9.42247357907864 10.2098833580099 10.1995754509912 10.2081668737849 10.0611594060562 10.1009939785746 10.0306861446201 9.74350178936377 10.0871740616556 9.62628815738011 0.09153453678198 0.0913497861598322 0.0921809746219984 0.0917572100213932 0.0914789376638391 0.0921450300203692 0.0924830264651538 0.0916221747927374 0.0992524547814967 0.0915146944506998 0.0877852465318097 0.0902056465824471 0.0904800917596505 0.0898911468231228 0.090970122035405 0.0877346106710304 0.101075460868422 0.0882864207597267 0.0898784855089563 5 5|0 -|/ 1498826 1499555 1499078.25 1498554 1500785 - gene protein_coding_gene TRUE TRUE AT5G05080.1|AT5G05080.2 UBC22 (ubiquitin-conjugating enzyme 18); ubiquitin-protein ligase|UBC22 (ubiquitin-conjugating enzyme 18) similar to ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G02760.1); similar to Ubiquitin-conjugating enzyme, E2 [Medicago truncatula] (GB:ABE91564.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) -0.0920754586757231 -1.14357359362633 0.278013933543199 1 0.669753604957861 19.3167598518150 -0.0920754586757231 0.0222855681927177 AT5G51500_at 1.45401457484497 1.80371170650889 1.60732989741506 1.81083680082213 1.55941677701366 1.48287682494162 1.61859670403263 1.53654167427460 1.75198340071076 1.47097553168043 1.93862018649712 1.86648743460488 1.82155788800595 1.78582391297966 1.65682530468901 1.58746033898462 1.70134025569205 1.72200101907703 1.97410513894544 0.236610168569113 0.237551589089408 0.238260708231362 0.238198758156600 0.237657823680688 0.234842570787571 0.23679361372561 0.237843365413232 0.245155170001829 0.239032982852094 0.234842570787571 0.234842570787571 0.238241064261407 0.234842570787571 0.234842570787571 0.241073497000757 0.240302925645454 0.239273339811809 0.241762169108157 5 5 - 20935191 20935672 20935433.455 20935155 20937064 - gene protein_coding_gene TRUE TRUE AT5G51500.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51490.1); similar to pectinesterase (EC 3.1.1.11) PECS-c2 - sweet orange (GB:T10494); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.104069460415730 -1.14293552641084 0.278267246885826 1 0.669098608842643 3.35535023648761 -0.104069460415730 0.0726612280857532 AT5G61060_at 6.99453013392963 7.01972125957905 7.89756268765595 8.10814282922876 7.89248862723215 7.55563763686601 5.97635358587534 6.20608709509699 5.75272436723502 5.64493212635856 6.64131658737236 6.73526557179682 6.3449802237056 6.96118456526188 6.76661569961876 6.89118652882191 6.50126829676961 6.59514132234994 5.68208058355687 0.189906651351661 0.184116615525162 0.188554804806662 0.195399573878612 0.185239079739311 0.197667157153501 0.188922228126907 0.184801752788364 0.208527253609125 0.196443012340649 0.186329677503756 0.192585009225155 0.187884202097294 0.191541187300004 0.189780734188974 0.185186228335597 0.193894374628614 0.190461066248445 0.188894487333226 5 5|0 -|/ 24584635 24585096 24584944.429 24584017 24588292 - gene protein_coding_gene TRUE TRUE AT5G61060.1 HDA05 (HISTONE DEACETYLASE5); histone deacetylase Encodes a member of the histone deacetylase family. similar to HDA18 (histone deacetylase 18), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G61070.1); similar to putative histone deacetylase [Oryza sativa (japonica cultivar-group)] (GB:BAC84464.1); similar to Os07g0602200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060205.1); similar to HDA1 [Zea mays] (GB:AAP92528.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) 0.106456201080260 1.14222398826287 0.278549940593686 1 0.668368521479574 13.3927482528558 0.106456201080260 0.0795345121919679 AT5G62410_at 2.19373062142779 2.56077092658974 2.75648557189689 3.12825122355102 2.57175151748188 2.85433065395429 2.08578112905943 2.44047444550190 2.51113678230437 2.72409390485474 2.82019071834788 3.50550722148383 2.92522610831634 3.31477225615711 3.83909367467882 3.17106653906416 2.92018438497409 3.08036735163181 2.9922907736059 0.237896956988426 0.236793731512796 0.242862757760604 0.234791609856304 0.244617268910981 0.245339763565054 0.236477646599397 0.240259892610640 0.244617557462368 0.242044853636988 0.238464047169569 0.24217518198678 0.23798398720842 0.250491122760227 0.23458397816934 0.240851912441646 0.231731537397846 0.234017936988909 0.237732756980825 5 5|0 +|/ 25078976 25079577 25079175 25073488 25079851 + gene protein_coding_gene TRUE TRUE AT5G62410.1 SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2) SMC2-1 (SMC2) similar to ATSMC2 (Arabidopsis thaliana structural maintenance of chromosome 2) [Arabidopsis thaliana] (TAIR:AT3G47460.1); similar to SMC2 protein [Oryza sativa] (GB:CAD59410.1); similar to PREDICTED: similar to SMC2 protein [Danio rerio] (GB:XP_692088.1); similar to Structural maintenance of chromosome 2 (Chromosome-associated protein E) (Chromosome assembly protein XCAP-E) (GB:P50533); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain SMCs flexible hinge; (InterPro:IPR010935) 0.123457965483828 1.14071909484001 0.279148571714817 1 0.66682554015997 5.54372610389291 0.123457965483828 0.11971913668376 AT5G55190_at 9.4806584695214 9.74519602359949 10.2539752007448 10.2580584680460 10.2842016176611 10.4230433459863 9.4882741551674 9.70278926527115 8.9358751265458 9.42968623261129 10.3403714422489 10.3010743681184 10.1613438700715 10.1555294536090 10.1621697036366 10.2670173804523 9.53145126518326 10.1092312328357 9.42027361529083 0.0965395282910708 0.091589160876248 0.0948829417085674 0.0923178550032697 0.0929186056829334 0.0937438793467219 0.0966973384348048 0.0959527139973278 0.121905204347559 0.0992671538666228 0.0917280521059258 0.0905007082670276 0.0936716464434896 0.0940454734921787 0.0938901069524507 0.090683993485625 0.104938147264973 0.0980296317436709 0.0921004642991934 5 5 + 22410194 22411158 22410831.182 22409402 22411398 + gene protein_coding_gene TRUE TRUE AT5G55190.1 RAN3; GTP binding A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. Identical to GTP-binding nuclear protein Ran-3 (RAN3) [Arabidopsis Thaliana] (GB:Q8H156;GB:O04148;GB:O04664;GB:O22495); similar to RAN2 (Ras-related GTP-binding nuclear protein 2), GTP binding [Arabidopsis thaliana] (TAIR:AT5G20020.1); similar to GTP-binding protein [Helianthus annuus] (GB:AAM12880.1); contains InterPro domain GTP-binding nuclear protein Ran; (InterPro:IPR002041); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.100885684707966 1.14035538723320 0.279293401246382 1 0.666452860465483 19.6497588587507 0.100885684707966 0.0636527302993408 AT5G02640_at 1.58418995642753 1.39981428835583 1.81072898178583 2.4566838840645 1.60532633968787 1.72462636019209 1.80657224892938 2.12429132081173 1.94315498383394 1.69334010900589 2.34223327448091 2.03856190900929 1.92728261387239 2.82618362779543 2.09536897792649 2.34637685715587 2.38683624294139 1.77519213991107 1.82034170706751 0.254645673468202 0.240851045116554 0.248878556649942 0.242848462608183 0.251435090652991 0.247691297279853 0.241958506366363 0.241678279993289 0.243015849556281 0.248925215603237 0.241538044118619 0.244362980180027 0.248512199100601 0.246552381759372 0.241802033068017 0.240851045116554 0.252099645683579 0.247266145903968 0.240851045116554 5 5 - 594342 594793 594590.182 594177 594865 - gene protein_coding_gene TRUE TRUE AT5G02640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46300.1); similar to unnamed protein product [Oryza sativa] (GB:BAA90509.1); similar to Os05g0120300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054491.1) 0.128500422447771 1.13990395199909 0.279473245654079 1 0.665990415334337 3.8321292002097 0.128500422447771 0.130243614909428 AT5G57920_at 2.76542896131344 3.20545620617985 3.46402488276341 3.76419191726879 3.16569567735261 3.46609933811173 3.08529648330368 3.25844145172581 2.73982728479522 2.92222833971484 2.97611923268923 3.21118557465369 2.89239235594332 3.43259687381938 3.31162198279039 3.20948908248729 3.1815746003708 3.21824821742822 2.87620531103982 0.240694925327633 0.243245890093776 0.240112169496693 0.240674351293202 0.238537766004192 0.24506455999016 0.237995439820565 0.248336614619875 0.250216918762819 0.238658623877472 0.246394281645706 0.243539877200923 0.237995439820565 0.241889137983807 0.245702748440328 0.237995439820565 0.241133538876368 0.246257829833916 0.237995439820565 5 5 + 23470939 23471434 23471308.2 23470825 23471623 + gene protein_coding_gene TRUE TRUE AT5G57920.1 plastocyanin-like domain-containing protein similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G31840.1); similar to phytocyanin-related protein [Ipomoea nil] (GB:BAA90481.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) -0.118619251275348 -1.13782253699987 0.280303614753938 1 0.66386004795079 6.28444959902212 -0.118619251275348 0.109987881548761 AT5G47570_at 10.8719732638000 10.8762438741038 11.4140233992905 11.4284250877285 11.1706236166007 11.0945195966557 10.9327225537787 11.0049034946590 10.8582535050639 10.9444666484321 11.4415263458311 11.5248413853242 11.2486003765459 11.4322734158980 11.6653142666487 11.3488226858375 11.2555158345072 11.4765839444114 10.6583111177014 0.0664375539430851 0.0656178501527624 0.0708912161294757 0.0677845844368814 0.0653507267986853 0.0710050364305532 0.0651975576005488 0.0663305372272315 0.0685394173862517 0.0663365111276338 0.0651975576005488 0.0659213434859922 0.0714849755592696 0.0717169033953484 0.0663989036800325 0.0662033199877274 0.0712099594758848 0.0654037259263879 0.067248982086643 5 5|0 -|/ 19310120 19311854 19311483.222 19309834 19311963 - gene protein_coding_gene TRUE TRUE AT5G47570.1 similar to hypothetical protein 25.t00006 [Brassica oleracea] (GB:ABD64969.1); similar to hypothetical protein 26.t00015 [Brassica oleracea] (GB:ABD64995.1) -0.0911571843995769 -1.13750124459153 0.280431963616055 1 0.663531464421845 22.2214436302978 -0.0911571843995769 0.0183369009384686 AT5G06810_at 3.2021413298981 3.34631464403855 4.1393821743317 4.06184737781417 4.22148681456425 3.62125562227175 3.10678598905404 2.74565928568170 2.62329193972903 2.88871894766216 2.82516549712613 3.26300187555156 3.20894697094983 3.20145492761707 3.21061279892825 3.04724307210930 3.10571346668753 3.2923608272554 2.81372959049014 0.193159166800657 0.192563096706461 0.202380750966257 0.217679893454728 0.199134683353078 0.200721503493613 0.193881017501377 0.195731322756988 0.202226355117708 0.191877223329914 0.191877223329914 0.194615210190256 0.219428591970843 0.199192315539851 0.193929856007969 0.197142354517352 0.199988217899519 0.193802942239973 0.194580176370685 5 5 + 2111668 2112203 2111988.091 2108494 2112257 + gene protein_coding_gene TRUE TRUE AT5G06810.1 mitochondrial transcription termination factor-related / mTERF-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19650.1); similar to Os08g0518200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062250.1); similar to Os07g0409400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059441.1); contains InterPro domain RuvA-like, C-terminal; (InterPro:IPR011132); contains InterPro domain Mitochodrial transcription termination factor-related; (InterPro:IPR003690) 0.125390464175701 1.13738938204093 0.280476660847408 1 0.663417080024278 6.51538878245107 0.125390464175701 0.124489656600680 AT5G63130_at 3.58476319729213 3.43507991878191 4.09769489873807 4.52854062585499 3.52261156814819 3.38888761915346 3.38475868715068 3.35887342943511 2.92174977931426 2.39774955650731 2.80416008727138 2.39475238647336 3.21429067462812 2.99498571953552 2.94659050406962 2.99536907908477 4.07769320473558 2.72615724275855 2.64023094371332 0.275814206703659 0.274625411955294 0.318658181663527 0.306831447211341 0.266520285309951 0.281691849624034 0.271522612019566 0.265267066049476 0.268862759077436 0.270216852834141 0.272193230986405 0.269345776215273 0.272789124517356 0.26887522943278 0.276665163849825 0.267739552020852 0.286610671773523 0.273844719070008 0.283418979525691 5 5|0 +|/ 25340456 25341058 25340825.9 25340328 25341498 + gene protein_coding_gene TRUE TRUE AT5G63130.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48240.1); similar to Octicosapeptide/Phox/Bem1p [Medicago truncatula] (GB:ABE82497.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) -0.107061382038739 -1.13738818056642 0.280477140954035 1 0.663415851510253 6.49889788748494 -0.107061382038739 0.0823757042479952 AT5G12020_at 1.99845577569988 1.57377053461003 1.79552080560289 2.1100308138626 1.53406204789790 1.81988154186014 1.66863675587669 1.58413096062348 2.65313439014666 1.71273987642786 2.19210684704276 1.97435645763170 2.14604937676376 2.13790539301997 2.33625159918865 2.270326038154 2.27868295847355 2.67292252855445 2.39246805706344 0.184137921769514 0.183505322251685 0.185800884363483 0.188844040123679 0.181255763345979 0.187005498363665 0.184452143930548 0.184592406025418 0.197663908541841 0.186989830054287 0.184447481043034 0.183183923409477 0.188976153174432 0.182756164091212 0.189596862817053 0.188323628631365 0.188331792939961 0.181255763345979 0.185392910359982 5 5 - 3882454 3882845 3882661.818 3882238 3882939 - gene protein_coding_gene TRUE TRUE AT5G12020.1 17.6 kDa class II heat shock protein (HSP17.6-CII) Identical to 17.6 kDa class II heat shock protein (HSP17.6II) [Arabidopsis Thaliana] (GB:P29830); similar to AT-HSP17.6A (Arabidopsis thaliana heat shock protein 17.6A) [Arabidopsis thaliana] (TAIR:AT5G12030.1); similar to 17.9 kDa class II heat shock protein (GB:P46516); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) -0.116264782770611 -1.13665671833505 0.280769550473776 1 0.662668111850402 4.012489116704 -0.116264782770611 0.104995576374273 AT5G14710_at 6.65421863342789 6.70546718030996 7.3708896607924 7.2487482926175 8.46885508123876 7.9693245837859 6.86780533401531 6.45787338225089 5.5800319491722 5.4308282521295 7.16019720622707 7.14918640788026 6.73864764799618 6.82778245624863 6.52826025939792 7.25616846166743 7.11619538963932 6.5202824633933 6.0287828766338 0.236816824901108 0.221043554976828 0.221715391143398 0.232502924667963 0.225097986780144 0.222190069796916 0.230212806518579 0.232931404181224 0.223950409420208 0.235840341314216 0.223837541547134 0.226382836362517 0.227791298787729 0.232614972811058 0.230284701711278 0.229159828505959 0.234867054363703 0.229401206436013 0.22887249338317 5 5|0 +|/ 4746478 4747609 4746927.286 4746335 4747937 + gene protein_coding_gene TRUE TRUE AT5G14710.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79809.1) 0.120348137251396 1.13610671341502 0.28098957682595 1 0.662106110016759 13.5138832998222 0.120348137251396 0.114153112169559 AT5G58110_at 9.42709225748998 9.6220284430763 10.1560966413042 10.1480083210692 10.3574026585992 10.0394139072818 8.99638477462332 9.25587489307235 8.56922812869855 9.02162813526256 9.51689202615978 9.3796051020045 9.5439353547740 9.44287311446002 8.83541852573816 9.6286841619627 9.39909062585922 9.0025181593283 9.29486599225148 0.170747864669947 0.170472089500186 0.175778969766511 0.174173180088530 0.173597714944389 0.195926895724182 0.167936741387865 0.165624599876578 0.184654906675498 0.167376255308589 0.1756536943389 0.167902830091451 0.164385870838262 0.171346537133075 0.180134183503628 0.168052987844470 0.193961460611002 0.185365843229412 0.165279817381575 5 5|0 +|/ 23532528 23533664 23533124.6 23532382 23533865 + gene protein_coding_gene TRUE TRUE AT5G58110.1 similar to Os02g0139100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045842.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL55062.1); similar to Os06g0703800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058502.1); contains domain FAMILY NOT NAMED (PTHR13009) -0.105536553898353 -1.13584626962597 0.281093812692222 1 0.661840057978162 18.9030550133262 -0.105536553898353 0.0786433024950076 AT5G23590_at 6.67825838119383 6.83249726115349 6.9120348407059 7.54633308109226 8.07453343244778 6.90528813170827 6.22815836134663 6.09003185680974 5.44547386473906 5.78596928715375 6.79729361285289 6.99028736109207 6.79167456243924 6.54484089011362 6.18456889696609 6.95154571726754 6.91080324446423 6.23158369666376 6.3429043864024 0.283969780025107 0.281539266528013 0.272563307452977 0.268822341131429 0.269122274341448 0.281652892311876 0.278275445456899 0.280618938951930 0.279458272272143 0.278835107447484 0.277183625472156 0.275670360538881 0.268822341131429 0.284923814846416 0.279924339321502 0.278008159294376 0.286451927830572 0.278838808257157 0.280577354597734 5 5|0 -|/ 7953861 7954432 7954084.833 7953532 7955643 - gene protein_coding_gene TRUE TRUE AT5G23590.1|AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding / nucleotide binding / unfolded protein binding similar to GFA2 (GAMETOPHYTIC FACTOR 2), heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G48030.1); similar to unknown [Sorghum bicolor] (GB:ABE77203.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.185975386311495 -1.13574024608945 0.281136254477296 1 0.661731764766265 13.1751122152227 -0.185975386311495 0.23297152027563 AT5G60090_at 1.98730289496937 2.13415189847515 2.36352457522080 2.16694472963981 1.52977960367632 2.20693724989236 1.94519037626604 1.96959921401703 1.89587947189714 2.05207327415958 2.36412430432209 2.10258879148125 2.32213310322740 1.94945330894655 2.36080091004072 1.88190519558070 2.64156205794651 2.61404059962857 2.64975151368752 0.205628459240386 0.201468364962585 0.202137224308967 0.203203808522481 0.203751948085576 0.201781863790882 0.201468364962585 0.208671684966109 0.207097882945118 0.206059550688426 0.205478151075806 0.204607974714492 0.201468364962585 0.211373036070341 0.207410383864015 0.203158021104991 0.204911220520931 0.205386869119529 0.208443728337654 5 5 - 24213312 24213971 24213595.818 24213308 24214951 - gene protein_coding_gene TRUE TRUE AT5G60090.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60080.1); similar to Os02g0513000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046943.1); similar to Protein kinase-like [Medicago truncatula] (GB:ABE77784.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81726.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) -0.125191685890994 -1.13460434978332 0.281591272717025 1 0.660572037812727 4.27733421134201 -0.125191685890994 0.124713057626584 AT5G25880_at 2.95939999088014 2.50545664526459 2.67894977615072 2.96513963628464 2.39612434166743 2.7985489669059 1.81158621856591 2.31770859313952 2.54853139399074 3.06584067422329 2.75729508387596 2.99072196426005 2.80781264882062 2.69850089705293 2.80102657076659 2.99076820159416 2.95608344325783 3.11605784511192 2.79363285998951 0.211129035748494 0.205390718994252 0.214093450381223 0.211733840098922 0.21694402810746 0.209258511168317 0.210475100952934 0.208441638929954 0.211675764597997 0.201313916517758 0.205667230579938 0.204786688068132 0.202900614618919 0.204130727310223 0.202207719185957 0.201313916517758 0.204850467721379 0.208612642114294 0.204690432680789 5 5|0 +|/ 9026842 9028238 9027648.556 9024552 9028380 + gene protein_coding_gene TRUE TRUE AT5G25880.1 ATNADP-ME3 (NADP-MALIC ENZYME 3); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. similar to ATNADP-ME4 (NADP-MALIC ENZYME 4), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT1G79750.1); similar to ATNADP-ME2 (NADP-MALIC ENZYME 2), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT5G11670.1); similar to ATNADP-ME1 (NADP-MALIC ENZYME 1), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT2G19900.1); similar to NADP-dependent malic enzyme (NADP-ME) (GB:P51615); similar to NADP-dependent malic enzyme (NADP-ME) (GB:P12628); similar to NADP dependent malic enzyme [Phaseolus vulgaris] (GB:CAA56354.1); contains InterPro domain Malic enzyme, NAD-binding; (InterPro:IPR012302); contains InterPro domain Malic enzyme, N-terminal; (InterPro:IPR012301); contains InterPro domain Malic oxidoreductase; (InterPro:IPR001891) -0.135551885181282 -1.13398367752521 0.281840143997502 1 0.659938719712752 5.4003400917292 -0.135551885181282 0.145414800838522 AT5G50375_at 4.91765848976442 5.60080199402288 5.10967361417784 4.65378276960131 5.82467785548819 5.67956658074095 4.60525000720154 4.76183064114135 4.48152637342309 3.87739190148081 6.33902444646087 6.61016233907496 5.69955132926352 5.96826176890006 6.91721103412816 5.499008286631 4.77737149342151 6.41018418107566 4.27787691934954 0.263216939612151 0.261698819902485 0.268740257161086 0.269961655728081 0.262359843194244 0.271488220692878 0.267646670828165 0.262514746438157 0.277416469398225 0.266480863351688 0.272940098645886 0.261779763314994 0.262646840744409 0.269350170460838 0.273758926865597 0.265821146571276 0.264305089172137 0.265616994758727 0.270599124053031 5 5|0 +|/ 20530018 20531119 20530492.7 20528893 20531474 + gene protein_coding_gene TRUE TRUE AT5G50375.1 CPI1 (CYCLOPROPYL ISOMERASE) Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. Identical to Cycloeucalenol cycloisomerase (EC 5.5.1.9) (Cycloeucalenol-- obtusifoliol isomerase) (Cyclopropyl sterol isomerase) (CPI1) [Arabidopsis Thaliana] (GB:Q9M643); similar to hypothetical protein MtrDRAFT_AC126782g10v2 [Medicago truncatula] (GB:ABE78923.1) 0.136134709260123 1.13258535928926 0.282401455055165 1 0.658512884890367 10.2640862063276 0.136134709260123 0.146851569899558 AT5G60160_at 8.78959229892993 8.8346552239303 9.76357625400609 9.83056131965276 9.53883960784372 9.33401195274758 8.54909738526039 8.99834279884897 8.15462971833446 8.49582577216353 8.81917447170272 8.7390952886773 8.96885808345948 8.84406636233302 8.57952736513016 9.12690062361275 8.92092862995552 8.80393004429438 8.28913308021255 0.172336270431999 0.164218098738446 0.173674888630854 0.170188803847463 0.16554461487413 0.181928359642383 0.162706010553666 0.160999507698436 0.201033089531669 0.167325526925585 0.174915170344533 0.170129135433130 0.172760576426727 0.179923323799715 0.168267891479300 0.160999507698436 0.185515158902450 0.171713100183239 0.169827448560979 5 5 - 24241117 24241891 24241451.091 24240942 24244109 - gene protein_coding_gene TRUE TRUE AT5G60160.1 aspartyl aminopeptidase, putative similar to aspartyl aminopeptidase, putative [Arabidopsis thaliana] (TAIR:AT5G04710.1); similar to Peptidase M18, aminopeptidase I [Medicago truncatula] (GB:ABE80427.1); similar to Os01g0967900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045513.1); similar to Os12g0236500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066463.1); contains InterPro domain Peptidase M18, aminopeptidase I; (InterPro:IPR001948) -0.108175226160193 -1.13219986144878 0.282556353778284 1 0.658120038304415 17.7865877545937 -0.108175226160193 0.0865781044260351 AT5G52960_at 8.5522314974936 8.45745130537072 8.70293674481979 8.59614007793468 9.52200432565543 8.97223154081799 9.0788611137745 8.6200563700747 8.49876625858151 8.35409428514302 9.8254260592293 10.0966907715384 8.97690665791819 9.42051656275902 9.9451077565941 9.4814286487954 8.44046166368106 9.03046147829175 8.1441386253584 0.225707369158014 0.218272612353096 0.223755553665965 0.224999336350248 0.215836634525743 0.225195221610726 0.216674695002110 0.215836634525743 0.246439596120877 0.229463691572086 0.219980785091831 0.217862668635751 0.228389848316802 0.221488153505979 0.219524412658827 0.215836634525743 0.250408425150078 0.247658283745926 0.221860005711570 5 5|0 +|/ 21494504 21494844 21494649.9 21494372 21495663 + gene protein_coding_gene TRUE TRUE AT5G52960.1 similar to hypothetical protein asr2994 [Nostoc sp. PCC 7120] (GB:NP_487034.1); similar to Os05g0569200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056361.1) -0.125397938162207 -1.12925396516993 0.283742238928490 1 0.655121373484663 17.6799681250986 -0.125397938162207 0.126358434123376 AT5G24090_at 1.91009135683854 1.88292285551087 1.97873943353627 2.09351807575277 2.01576428960481 1.90111196319403 1.68533830617322 1.12131813923951 2.05775209366903 1.05985498953754 1.67865113410599 1.76374651801038 1.64263399383837 1.64792083920120 2.12282366468888 1.49762010028688 1.95488416147818 1.65884642113787 1.68059028168152 0.216916854474928 0.217787906368306 0.221460827946763 0.224131250122427 0.223465295384882 0.221129838937668 0.216916854474928 0.218539338146109 0.218655190173245 0.233500079422556 0.225547884370419 0.222871786846240 0.216916854474928 0.223932695103627 0.223149784134861 0.216916854474928 0.218460527136342 0.226772817569013 0.221614925614479 5 5|0 -|/ 8143902 8144649 8144229.8 8143702 8145255 - gene protein_coding_gene TRUE TRUE AT5G24090.1 acidic endochitinase (CHIB1) Identical to Acidic endochitinase precursor (EC 3.2.1.14) (CHIB1) [Arabidopsis Thaliana] (GB:O22072;GB:O22073;GB:O24614;GB:Q5HYZ8); similar to acidic endochitinase (GB:AAA32768.1); contains InterPro domain Glycoside hydrolase, chitinase active site; (InterPro:IPR001579); contains InterPro domain Glycoside hydrolase, family 18; (InterPro:IPR001223) 0.114045054455216 1.12905219836134 0.28382360233579 1 0.65491621201293 3.49624554034267 0.114045054455216 0.101672548603464 AT5G44400_at 6.54426612946395 7.06178456072236 5.93422264124469 6.14308742073065 4.73437522145968 4.85247526080041 4.72671665245275 5.19038803012083 4.41115131180800 5.67876650048468 7.89152779171891 9.52686850261757 7.48473233691594 7.82580936577908 9.44984235144852 6.90871088232001 5.28031848378911 7.97728089684452 6.41672257947036 0.258703967448884 0.250819968217305 0.248605722579078 0.250020450886125 0.261319111031263 0.264892653114048 0.257440278367635 0.255994247712794 0.263762975988582 0.250369588826435 0.256085687056079 0.261564582855486 0.248605722579078 0.256994111256694 0.253679421121775 0.248646371830437 0.255491588454725 0.254927624856332 0.253870393397689 5 5 - 17903593 17904147 17903915.364 17903421 17905707 - gene protein_coding_gene TRUE TRUE AT5G44400.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44390.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44380.1); similar to EDA28/MEE23 (embryo sac development arrest 28, maternal effect embryo arrest 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90048.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) -0.125787920760898 -1.12901558543895 0.283838368608618 1 0.654878986108261 12.2960893847995 -0.125787920760898 0.127214434785899 AT5G22980_at 2.20616164208442 3.00366373120686 3.05729589215116 2.78529841642793 2.68004104610775 2.63757713542906 2.13410685014557 2.77332622811822 3.04641766092763 2.81529080634618 2.81033909216108 3.00303559302074 3.06457299279392 2.53683042334381 2.49527423579502 3.28087362811560 3.23983066926951 3.13711078346776 2.5510574479284 0.231120542861672 0.230599391915120 0.238772696184155 0.232812347564558 0.237814042072614 0.233973952688958 0.23532041890217 0.234486828064658 0.239744899725727 0.232552587055618 0.232530924559937 0.23204792338853 0.226982942292131 0.227412922203781 0.224563487396029 0.226371659395400 0.231219043002331 0.230953146258945 0.237262963199884 5 5|0 +|/ 7689479 7690444 7689872 7688087 7690651 + gene protein_coding_gene TRUE TRUE AT5G22980.1 SCPL47 (serine carboxypeptidase-like 47); serine carboxypeptidase similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to SCPL49 (serine carboxypeptidase-like 49), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G10410.1); similar to Serine carboxypeptidase [Prunus mume] (GB:BAE48666.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) -0.154884434630423 -1.12425273995927 0.285764347883964 1 0.650044315132954 5.53480323386554 -0.154884434630423 0.183176281693088 AT5G40640_at 3.17319755008585 2.98516053265722 3.73677106044498 3.80765336055774 4.20375612082217 3.41159682918209 3.28768471958346 3.37650173790687 2.79527775179742 3.05159238617214 3.69766949331677 3.71858399897204 3.55304185670052 3.83974466759614 3.58060801525497 4.12114215378583 3.67704678274194 3.61506885377907 2.89502742486349 0.216073225485637 0.223887161705345 0.224271035777012 0.222843823957364 0.224832149478684 0.221044671325443 0.228344028786177 0.228944169607736 0.234480201078268 0.231307724932823 0.216073225485637 0.216073225485637 0.218786368006393 0.222731454009610 0.217228559156515 0.222686970938085 0.230619541518711 0.229818639439052 0.219423093276880 5 5|0 +|/ 16296712 16297341 16296951.5 16294270 16297652 + gene protein_coding_gene TRUE TRUE AT5G40640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27390.1); similar to Steroid nuclear receptor, ligand-binding [Medicago truncatula] (GB:ABD28762.1); contains domain Ribosome inactivating proteins (RIP) (SSF56371) 0.132697930706913 1.12367318090561 0.285999397060837 1 0.649457089534222 6.8174547799281 0.132697930706913 0.142261778257855 AT5G40560_at 1.0828130219359 1.37610564592336 1.05494060585907 1.34054512945131 1.23675732998462 1.21190058664176 1.18287981198279 1.00070615603690 1.06720244414727 1.39790009458070 1.06832253962280 1.13280846279843 1.53557603053216 0.947946336987269 1.32047676022386 1.31416783765566 1.37089382975453 0.790551882183123 1.38955378953986 0.198089471211717 0.196424126027544 0.199389534752678 0.195303106743409 0.199148544341802 0.201170326166037 0.199544365228105 0.194429792275936 0.202346857200118 0.204000361359909 0.198593802018473 0.202042375893197 0.198822217032365 0.198332979682341 0.208170957750201 0.194429792275936 0.201948379503274 0.211076603140099 0.194429792275936 5 5|0 +|/ 16262669 16263713 16263426.111 16261771 16263747 + gene protein_coding_gene TRUE TRUE AT5G40560.1 DEGP13 (DEGP PROTEASE 13); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Putative protease Do-like 13 (EC 3.4.21.-) (DEGP13) [Arabidopsis Thaliana] (GB:Q9FM41); similar to DEGP10 (DEGP PROTEASE 10), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT5G36950.1); similar to Os06g0234100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057235.1); similar to Os05g0417100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055560.1); similar to Serine protease (ISS) [Ostreococcus tauri] (GB:CAL53952.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) -0.104054063598741 -1.12367100142177 0.286000281266929 1 0.649454881659749 2.4208202373398 -0.104054063598741 0.0776619521985805 AT5G23830_at 2.24759625100165 2.77965996476606 3.1755935658801 3.47127920160489 2.23313274106312 2.87113079477048 1.97492419535196 2.86169650046413 2.97985028842589 2.89433199560676 2.41600587682398 3.19173118314418 2.50717830192911 2.53557310875018 2.54519300686704 2.77252178369855 2.73877890857792 3.02722064825862 2.65095743382674 0.222257064195520 0.227531839071943 0.230451004713942 0.237614228604521 0.220052841446183 0.224305094208032 0.230878302693515 0.226726684655047 0.230660443155563 0.224045481023902 0.221658129356483 0.225330733517513 0.224602864739671 0.228000960431844 0.220052841446183 0.224880210074278 0.229294820690741 0.220150357143905 0.226855910987844 5 5|0 +|/ 8034077 8034607 8034329.3 8033743 8034892 + gene protein_coding_gene TRUE TRUE AT5G23830.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein similar to MD-2-related lipid recognition domain-containing protein / ML domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23840.1); contains InterPro domain E1 protein and Def2/Der2 allergen; (InterPro:IPR003172) -0.174007705455308 -1.12318941778494 0.28619570935588 1 0.64896710565071 5.48112094763413 -0.174007705455308 0.216417185648856 AT5G20720_at 11.2658468031859 11.4165314915555 11.6519088760029 11.7379721982899 11.6262312521823 11.4274044335903 11.5396522776393 11.6086521487077 11.3892748408539 11.5459772687085 12.0440187570003 12.4839515894327 11.9334765726915 12.010327599583 12.8075054313707 12.0443143392152 11.7884776294258 11.9692931156548 11.3336127199055 0.084485811116742 0.0779826600320125 0.0830770901970936 0.0796298066317038 0.0803279743326479 0.0810857871782463 0.0810870326570127 0.0805909958545722 0.0840305386476548 0.0776005174536763 0.0775166665595489 0.0775166665595489 0.078698091127894 0.081375481760977 0.0808765558713487 0.0776848813662105 0.0873910988946615 0.0811693540587125 0.0776644210984483 5 5|0 +|/ 7015527 7016314 7015977.556 7014671 7016483 + gene protein_coding_gene TRUE TRUE AT5G20720.1|AT5G20720.2 CPN20 (CHAPERONIN 20); calmodulin binding Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. Identical to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20) (CPN21) [Arabidopsis Thaliana] (GB:O65282;GB:Q9TNN2); similar to CPN10 (CHAPERONIN 10) [Arabidopsis thaliana] (TAIR:AT1G14980.1); similar to cp10-like protein [Gossypium hirsutum] (GB:AAM77651.1); contains InterPro domain Chaperonin Cpn10; (InterPro:IPR001476); contains InterPro domain GroES-like; (InterPro:IPR011032) -0.094853018947008 -1.12274576959557 0.286375834630243 1 0.648517895421298 23.3133377213706 -0.094853018947008 0.0472048768401124 AT5G05170_at 10.7347541235364 10.9585827820680 10.8988812041635 11.0874268728510 11.4313790227939 10.8141875869312 11.1798826124758 11.2778473499438 11.4655538469544 11.3577020715938 12.6236271318652 12.3710407921134 12.2583052424151 12.3459187280408 12.2804086333828 12.0651714050572 11.3952424865915 12.4292062869627 11.3555990485588 0.0767464117085742 0.0704226522246514 0.0735384700244198 0.0744827317425965 0.0717447680286906 0.0875373912425489 0.0707078307635149 0.0732078261949415 0.0803293788563432 0.0731871374642557 0.071748513239906 0.0709747284902795 0.0716151780790561 0.0718699462025263 0.0705718751130643 0.069723972751497 0.0876043253834706 0.077333364684711 0.0706331334224122 5 5 - 1530446 1530921 1530697.545 1530175 1535415 - gene protein_coding_gene TRUE TRUE AT5G05170.1 CESA3 (CELLULASE SYNTHASE 3); cellulose synthase/ transferase, transferring glycosyl groups cellulose synthase. Involved in defense signaling. Identical to Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben- resistant protein 1) (Ath-B) (CESA3) [Arabidopsis Thaliana] (GB:Q941L0;GB:O48948;GB:Q9FHK6); similar to CESA1 (CELLULASE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to CESA10 (CELLULASE SYNTHASE 10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G25540.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to CesA2 [Acacia man (GB:AAT66941.1); similar to cellulose synthase 4 [Eucalyptus grandis] (GB:AAY60846.1); similar to cellulose synthase catalytic subunit [Gossypium hirsutum] (GB:AAD39534.2); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Cellulose synthase; (InterPro:IPR005150); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.121249482762012 -1.12162339446472 0.286831921257109 1 0.647382059677618 22.8549010663484 -0.121249482762012 0.119416633253493 AT5G49540_at 9.58183076038825 9.51782922637192 10.1722766295560 10.0700364407425 10.1653268906674 10.0150072422913 9.18603718702206 9.29164499891177 9.41347976186976 9.14318265575762 10.2127134488435 10.1929489776992 10.0407534917866 10.0735414254863 10.1130962645203 10.1951613878074 10.0971336073469 10.0532389943338 9.22975509581722 0.09410389642185 0.0892978790347753 0.0930625901230151 0.0930172486842829 0.0915828502038395 0.0931675683786295 0.0936927129370372 0.0899010893503952 0.0991215934604528 0.0990909312244888 0.0916218470910338 0.0903633392509076 0.0920016355925324 0.0913152132204904 0.0912257460796177 0.0892978790347753 0.0892978790347753 0.0905723893573785 0.100143172556046 5 5|0 -|/ 20122467 20122776 20122550.857 20121707 20123348 - gene protein_coding_gene TRUE TRUE AT5G49540.1 similar to Protein of unknown function DUF786 [Medicago truncatula] (GB:ABE90870.1); contains InterPro domain Protein of unknown function DUF786; (InterPro:IPR008504) 0.0926562908423354 1.12018392777610 0.28741768333271 1 0.645926611585722 19.442229982432 0.0926562908423354 0.0380319897089356 AT5G12240_at 1.66037154906679 1.86631234416409 2.23292371337454 1.70951777631767 1.86818334417857 1.75345452804324 1.99127203110568 1.82655203769311 1.20440037070938 1.67736373519372 1.66632538116136 1.65463801500410 1.70082522686643 1.98992333545472 1.96513602648748 2.18392483983547 1.75700516520220 1.53195143413671 1.23843604658318 0.219714904575059 0.214246714769991 0.216258544485305 0.222768436456725 0.218057673108689 0.218641315386530 0.211368132661225 0.220615508455206 0.238014140761791 0.221894222332353 0.218497863465066 0.217127480017344 0.216931695313736 0.217494408343114 0.212211775984286 0.217041730130526 0.219162581131466 0.211214596771207 0.219892851571914 5 5|0 -|/ 3960088 3960627 3960341.2 3959121 3960778 - gene protein_coding_gene TRUE TRUE AT5G12240.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC16476.1); similar to Os07g0641800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060432.1) 0.113849410056610 1.12000140338029 0.287492024036287 1 0.645742163739193 3.45338152991662 0.113849410056610 0.103350117677570 AT5G17220_at 2.52582083410195 1.86753765175087 1.78288032340926 1.48212463603628 1.87876587044752 1.95450401675119 2.13544202766618 1.64701102002336 1.98332915862655 1.49767177457884 2.0823590070333 1.72756727437759 1.88273647801988 1.99593157171075 1.80725449211400 2.16682933782205 2.37722338050194 2.02882228075826 1.65042831051385 0.184236055320278 0.177580357793972 0.183517032368156 0.183265888519663 0.180872949222997 0.182933669891807 0.175600263496694 0.180990769273359 0.176272501291486 0.178153050505602 0.180700507601642 0.178272876516542 0.177451208240801 0.183216112799615 0.187526681619446 0.182906711202258 0.178920344597457 0.180446169696713 0.178774379268592 5 5 + 5658875 5659297 5659020.091 5658462 5659388 + gene protein_coding_gene TRUE TRUE AT5G17220.1 ATGSTF12 (GLUTATHIONE S-TRANSFERASE 26); glutathione transferase Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. similar to ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11), glutathione transferase [Arabidopsis thaliana] (TAIR:AT3G03190.1); similar to glutathione S-transferase [Citrus sinensis] (GB:ABA42223.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, C-terminal; (InterPro:IPR004046) -0.137129718260316 -1.11999593414762 0.287494251839809 1 0.645736637229308 3.76879424370598 -0.137129718260316 0.151666577224005 AT5G17730_at 0.835730243605757 1.04345391806101 1.69469262375409 0.905609921810983 1.12952833022018 1.09873409300885 1.45409319363392 1.36174701285293 1.53794947903746 1.44858189382012 1.32285359374253 1.23103039415552 1.37384941123525 0.99517851957725 0.880691986154194 0.766973461366907 1.10882369716571 1.5943610365205 0.908837123942583 0.237447802763034 0.242757911905734 0.249192680761965 0.251603804614644 0.248736243194248 0.252779375132977 0.246083773486831 0.241405036263174 0.243978811773565 0.245195814201672 0.24286596288120 0.241102519263372 0.243141204392293 0.238172473320635 0.239145167176085 0.240980906168907 0.242675998719829 0.237321787719696 0.239248457111569 5 5 - 5852606 5853155 5852876.545 5852500 5854001 - gene protein_coding_gene TRUE TRUE AT5G17730.1 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G17740.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAT37998.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.132232991374357 -1.11996812316282 0.287505580401514 1 0.645708535312648 2.41928688116336 -0.132232991374357 0.142208056959311 AT5G26870_at 0.626432514465438 0.730265354159592 1.21245883089147 0.93053425704417 1.08395962052595 0.975840464404834 0.577601694790289 0.869935872266661 1.19740895207227 0.893523623458187 0.95339041148163 1.18634174906497 1.16557848081916 0.612410683053357 1.03300584493824 0.79031699048999 0.812675659099769 0.882191910062826 0.763386080282377 0.180450964792879 0.184713733348735 0.181949029942622 0.181181873568454 0.180117184702467 0.181898065775112 0.180976844232776 0.184992716548016 0.184978481504499 0.189823212717938 0.180117184702467 0.182962794435299 0.183245314147894 0.184760584317082 0.189529998089944 0.180117184702467 0.182860266066455 0.188529446852250 0.180117184702467 5 5 - 9457435 9457603 9457499.545 9457062 9457669 - gene protein_coding_gene TRUE TRUE AT5G26870.1 MADS-box family protein similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT5G27580.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) 0.102715888482788 1.11960371383255 0.287654051262742 1 0.645340363628963 1.81634283510048 0.102715888482788 0.0749172302402652 AT5G67330_at 8.97812723335384 9.20075116088416 9.8456274878447 9.82517303870651 10.1935083325102 10.1864286730369 9.54133797777348 9.74196360600997 9.17057728001529 9.80956085415313 9.70218176147788 10.0006297746259 10.5226513082168 10.0003855550213 9.66696785683007 10.5361741271425 10.2577503456124 9.59557778103046 9.48583415473134 0.114280930196222 0.102770873732152 0.109326752111758 0.110735210845180 0.107374354808160 0.115778911847571 0.111279656396069 0.104449762660874 0.118399292834115 0.105423436382478 0.103365727126316 0.105178153804809 0.103499636715095 0.111975200722825 0.108250095267511 0.106241250924248 0.116091114529941 0.108692495295454 0.109197807711904 5 5 + 26880242 26880752 26880521.636 26878953 26881123 + gene protein_coding_gene TRUE TRUE AT5G67330.1 ATNRAMP4 (Arabidopsis natural resistance-associated macrophage (NRAMP) protein 4); manganese ion transporter/ metal ion transporter Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. Identical to Metal transporter Nramp4 (AtNramp4) (NRAMP4) [Arabidopsis Thaliana] (GB:Q9FN18;GB:Q9SNV8); similar to NRAMP2 (NRAMP metal ion transporter 2), metal ion transporter [Arabidopsis thaliana] (TAIR:AT1G47240.1); similar to NRAMP3 (NRAMP metal ion transporter 3), manganese ion transporter/ metal ion transporter [Arabidopsis thaliana] (TAIR:AT2G23150.1); similar to NRAMP5 (NRAMP metal ion transporter 5), metal ion transporter [Arabidopsis thaliana] (TAIR:AT4G18790.1); similar to Nramp metal transporter homolog [Thlaspi japonicum] (GB:BAC80141.1); similar to ferrous ion membrane transport protein DMT1 [Glycine max] (GB:AAO39834.1); similar to Nramp metal transporter-like protein [Thlaspi caerulescens] (GB:AAW47269.1); contains InterPro domain Natural resistance-associated macrophage protein; (InterPro:IPR001046) -0.0957633884893723 -1.11951395685611 0.287690629941082 1 0.645249694144357 19.4510883104539 -0.0957633884893723 0.051997257080211 AT5G57350_at 11.65532180255 11.6734702426636 12.1884840146703 12.2139410685312 12.3474998123199 12.0246926338026 12.3514288887895 12.1225041741866 11.5881305996873 11.7375781871406 12.2252532951906 12.4051502998639 12.1516084111782 11.7902185638608 11.6166058436260 12.4593929239044 12.2270507392945 12.1794416257901 11.3753313250129 0.0809889828551758 0.0735368128764688 0.0750474056317075 0.0770932386483127 0.0752646308948991 0.074087448175231 0.0750271666148576 0.0740218658220951 0.0827023768509399 0.0792863988063164 0.081101893536338 0.0735368128764688 0.0785245404615054 0.0887129393681748 0.0841180368435214 0.0754029053513406 0.0772741066323396 0.0760823718677182 0.0814262842207367 5 5|0 -|/ 23248438 23249189 23248867.778 23248105 23253798 - gene protein_coding_gene TRUE TRUE AT5G57350.1 AHA3 (Arabidopsis H(+)-ATPase 3); ATPase member of Plasma membrane H+-ATPase family Identical to ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3) (AHA3) [Arabidopsis Thaliana] (GB:P20431); similar to AHA1 (PLASMA MEMBRANE PROTON ATPASE), ATPase [Arabidopsis thaliana] (TAIR:AT2G18960.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to AHA9 (Arabidopsis H(+)-ATPase 9), hydrogen-exporting ATPase, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT1G80660.1); similar to Plasma membrane ATPase 4 (Proton pump 4) (GB:Q03194); similar to plasma membrane H+-ATPase [Lycopersicon esculentum] (GB:AAB17186.1); similar to plasma membrane proton pump H+ ATPase (GB:AAA32813.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain Plasma-membrane proton-efflux P-type ATPase; (InterPro:IPR006534); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain ATPase, P-type cation-transporter, N-terminal; (InterPro:IPR004014); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) -0.100621572865051 -1.11945947616193 0.287712834223441 1 0.645194662311642 23.9215946214153 -0.100621572865051 0.0686982174242896 AT5G05510_at 2.28250888579695 1.83985738211079 2.18369746914957 1.99918519490664 1.52099457186701 2.25297982153540 1.95171394391022 2.22601435685384 2.35942003904072 1.79054133170097 2.1027578820861 2.45124118608748 2.16784892153069 2.08585238876202 2.58598005114208 2.0433956894235 2.09843570876524 2.40948021616706 2.05449115615221 0.228433542582398 0.232196872094985 0.237350253029432 0.241661944134576 0.233946719960222 0.239121698917524 0.235561900248974 0.232574081991616 0.244851737912396 0.233505183518206 0.230321463018075 0.228433542582398 0.230534736655140 0.22878191946109 0.235304311543224 0.231103751189782 0.238566293377716 0.238501546879594 0.230159297161571 5 5 - 1630714 1631222 1630981.455 1630560 1632599 - gene protein_coding_gene TRUE TRUE AT5G05510.1 protein kinase-related similar to spindle checkpoint protein-related [Arabidopsis thaliana] (TAIR:AT2G33560.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91291.2); contains InterPro domain Mad3/BUB1 homology region 1; (InterPro:IPR013212) -0.140777157405553 -1.11937004890642 0.287749284283227 1 0.645104334871102 4.18775637716305 -0.140777157405553 0.158704266184266 AT5G22730_at 4.51083544629304 4.84423551745618 5.13040423418828 5.6644125170663 5.63868873500527 5.48917158173177 4.34695505589136 4.66553122182890 4.53277414253937 4.59395592981981 5.5209510400521 5.73784028031915 5.58973314786001 5.34928703648183 4.94827167103774 5.58259702316286 4.97373360806295 5.04127034167381 4.73721244789265 0.210366442143094 0.200261853310452 0.227859829657596 0.206972230405647 0.204743893511238 0.213609811444647 0.203167219697709 0.204222108816008 0.212102139686653 0.195478884570411 0.195478884570411 0.19582469766181 0.195478884570411 0.206271750142297 0.205458301456582 0.195478884570411 0.208564859990823 0.198483282892061 0.201434812399243 5 5 - 7551645 7552376 7551926.273 7551432 7553455 - gene protein_coding_gene TRUE TRUE AT5G22730.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22610.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE80758.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.123532948699378 -1.11914467210951 0.287841162472209 1 0.644876714109003 10.0184166346819 -0.123532948699378 0.124811482552964 AT5G61980_at 0.950215811664215 0.986585939275017 1.73042705620298 1.01895590118663 1.14672240215584 1.09737395043754 0.843610960016792 1.36466503831511 1.12944685209750 1.35438861566249 1.80691697043979 1.57901808730516 1.1570990739435 1.95084493242027 1.66104533702588 1.50915946262740 1.33846462427919 1.30769231593615 1.43414149991585 0.192497805299378 0.187626355913690 0.190133287930018 0.198118785147039 0.186461891050668 0.188225069029566 0.186461891050668 0.186461891050668 0.187490810175141 0.189285657357388 0.191159893871797 0.188288105914649 0.186911036600549 0.195299531958958 0.19079853493765 0.189803031481209 0.190656690347094 0.196947506148568 0.190153155593441 5 5 + 24915746 24916338 24915952.364 24911698 24916404 + gene protein_coding_gene TRUE TRUE AT5G61980.1 AGD1 (ARF-GAP DOMAIN 1); protein binding A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons. similar to SFC (SCARFACE, VASCULAR NETWORK DEFECTIVE 3) [Arabidopsis thaliana] (TAIR:AT5G13300.1); similar to Os09g0510700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063635.1); similar to putative ARF GTPase-activating domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01238.1); similar to Os08g0537600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062366.1); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993); contains InterPro domain BAR; (InterPro:IPR004148); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) 0.13765589185975 1.11866622798587 0.2880362824937 1 0.644393623622472 2.56470584393466 0.13765589185975 0.152979403971954 AT5G01070_at 1.13535219480834 0.96766321918031 1.44418450771590 1.63737650787834 1.02575464456691 1.33465378841904 1.14139847806184 0.847378829284288 1.02011739377336 1.34106707187143 0.979010796377223 0.935601628915121 0.905098070668362 0.909518063865239 1.32570773773271 1.13695582085343 1.62344879371067 0.850925529262482 0.817862108480644 0.21132993806134 0.213013152341689 0.213412541006295 0.214994003637352 0.213236591863899 0.220179300643753 0.218929431145877 0.213693026583218 0.212052058847985 0.216585988756914 0.214687875447698 0.215959541305903 0.216130843031867 0.225994159993383 0.218043200247675 0.211121932248726 0.217868808033704 0.218090153689921 0.210291873566170 5 5 - 25490 25772 25644.545 25424 25798 - gene protein_coding_gene TRUE TRUE AT5G01070.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G37950.1); similar to zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB89518.1); similar to Os05g0452800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055711.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.106618218005242 1.11797463053661 0.288318511837764 1 0.643695591682808 2.26320301951352 0.106618218005242 0.0860603777388815 AT5G37910_at 0.403861500227011 0.640044540832629 0.637067680435156 1.00799788319995 0.803815423665947 0.470120896002124 0.491105216848091 0.75577688367933 1.04786106179207 0.284052965547163 0.423533413634681 1.03354377224970 1.13936822995882 0.540713438990677 1.24515356614504 0.79655577701266 0.822358770886818 0.496972829556749 0.573066977286928 0.208320594606556 0.199150730104549 0.208509973568374 0.201005948773296 0.201552689757766 0.207336175738939 0.202893784515318 0.200431877905337 0.207282283194876 0.209587988621271 0.21129081864915 0.204403196304628 0.221959129714033 0.203762253105268 0.201480726826650 0.202251466132357 0.206558809480057 0.208922159624331 0.203304609886845 5 5 - 15113573 15114015 15113778.091 15113440 15114548 - gene protein_coding_gene TRUE TRUE AT5G37910.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) protein, putative [Arabidopsis thaliana] (TAIR:AT5G37890.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.114759148756965 1.11791189963172 0.288344121839565 1 0.643632293630345 1.37485807461783 0.114759148756965 0.105942076961131 AT5G01650_at 10.3567658632828 10.4194755841358 11.1479591185288 11.0852574304697 11.2927396036030 10.9455541535466 10.2411704877849 10.2745735973189 10.1390708368374 10.1659283510256 10.7387643290706 10.7330174944956 10.8894521136573 10.8148390221248 10.7693813621429 10.8354784056904 10.7600142456362 10.6631175176114 10.1310095309634 0.104537909802113 0.103577239293929 0.104403233279024 0.107687660987191 0.103320232341438 0.106113800726981 0.107683540456253 0.111931398675710 0.115491027635842 0.112972658431146 0.103314232087578 0.101775051386863 0.101775051386863 0.106348625061819 0.103834734441423 0.103856947375644 0.10801789015508 0.10930117899423 0.105297111561502 5 5|0 -|/ 242735 243991 243470 242547 244108 - gene protein_coding_gene TRUE TRUE AT5G01650.1 macrophage migration inhibitory factor family protein / MIF family protein similar to macrophage migration inhibitory factor family protein / MIF family protein [Arabidopsis thaliana] (TAIR:AT5G57170.1); similar to Macrophage migration inhibitory factor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22330.1); contains InterPro domain Macrophage migration inhibitory factor; (InterPro:IPR001398) 0.0984589847704704 1.11760157744822 0.288470837275968 1 0.64331920618568 21.1808591302901 0.0984589847704704 0.0622798502972799 AT5G41720_at 1.06329058875727 1.26699551200800 1.90354970800431 1.65665197575407 1.42650631458750 1.27923095384419 1.09748470181356 1.46237523448713 1.21553016237227 1.69612258375343 1.52927999901125 1.63152118663693 2.20533695955483 1.59756552747153 1.82117307592760 1.32297954345801 1.94417238665334 1.71525156553409 1.98927398369592 0.214765602997908 0.198013752854372 0.198398574021425 0.204776634439681 0.193636121961416 0.200630138854878 0.191609702651961 0.198556053921431 0.213691407335142 0.194803739045062 0.201697948370305 0.193373298055005 0.194041554535728 0.213526449007595 0.196952648344872 0.194703841023115 0.212349776002392 0.200315052465882 0.198402569324171 5 5 - 16700676 16701070 16700839.818 16700393 16701170 - gene protein_coding_gene TRUE TRUE AT5G41720.1 similar to F-box protein-related [Arabidopsis thaliana] (TAIR:AT1G64290.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10759.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.107190684459961 1.11705977590310 0.288692177006680 1 0.642772737628916 3.07178676055941 0.107190684459961 0.0877797190390014 AT5G51160_at 0.716019274741594 1.05085659827302 0.965333668027532 1.05789968549920 0.935499440882553 0.954953975033 0.676724471031262 1.04548938471807 1.05106340084538 0.861538519741097 0.915560221703696 0.878135315677605 0.869119914625127 1.58848031682773 1.15384786852987 0.715693549065109 1.24460688094829 1.54587270965748 0.721816259859315 0.205411040128605 0.204441892221091 0.20829672569227 0.21464492391395 0.205438933108641 0.204305511377136 0.204305511377136 0.208182858571537 0.212622109072086 0.205093000030501 0.207148761460443 0.204812112757243 0.206002316178868 0.206482682045443 0.213794388698047 0.207344253842099 0.215111398462878 0.212545838282333 0.211703861523041 5 5 + 20810371 20810835 20810637.818 20809437 20811067 + gene protein_coding_gene TRUE TRUE AT5G51160.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G10720.1); similar to Ankyrin [Medicago truncatula] (GB:ABE83785.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.107172082810184 1.11702990874518 0.288704382316520 1 0.642742619152393 1.92137405758143 0.107172082810184 0.0877389775957408 AT5G67240_at 5.52397013097878 5.37746213522047 6.22668715008309 6.49807296502315 6.81047794135743 6.02735234409131 5.89963988281234 5.429276438855 5.01945283641645 5.36467545844241 6.07476928221327 6.6642048830865 6.06382542687268 5.51236414675421 6.12614765072979 6.44259235014181 6.48229024516274 5.98977505804163 5.39297627537156 0.227316985057438 0.217439886526354 0.221356064124583 0.213426102572925 0.217564741936582 0.227417318224493 0.212316236572371 0.212691723500617 0.224954125724259 0.219388426205170 0.215767969689764 0.216023015461234 0.217359353733097 0.222678355270217 0.231254344844186 0.219301649533706 0.222126767988939 0.213385957897905 0.214887262080722 5 5|0 -|/ 26841680 26842356 26841960.7 26841462 26845396 - gene protein_coding_gene TRUE TRUE AT5G67240.1 exonuclease similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to H0212B02.12 [Oryza sativa (indica cultivar-group)] (GB:CAH68267.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease, RNase T and DNA polymerase III; (InterPro:IPR013520) -0.144703599196962 -1.11574890341927 0.289228244555559 1 0.641451420508745 11.6883828671121 -0.144703599196962 0.166855778579177 AT5G58970_at 6.92536390266351 7.27356913662693 7.70761170627383 7.89943782103565 8.54344302918422 8.11103615651447 7.70066837987047 7.80869778334959 6.52227216918486 6.66748188836104 8.35368449464266 8.38885192649497 7.96327452223787 8.28312155616382 8.10791433012294 8.11364166305233 7.86830262502374 7.94363627870735 6.57631834050156 0.182066192523934 0.178081376020848 0.190526681214385 0.183871378812015 0.179364154356013 0.185370677191717 0.180482518001402 0.181467889270415 0.201590672724517 0.183996156370664 0.178081376020848 0.180178289881376 0.184508027685413 0.187108651667624 0.189751428317382 0.180943999882196 0.185734484649914 0.189528646501552 0.184420392838893 5 5|0 -|/ 23826057 23827193 23826727.8 23825687 23828484 - gene protein_coding_gene TRUE TRUE AT5G58970.1|AT5G58970.2 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler|ATUCP2 (UNCOUPLING PROTEIN 2) uncoupling protein similar to ATPUMP1/UCP1 (UNCOUPLING PROTEIN 1), binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to SfUCPa [Symplocarpus foetidus] (GB:BAA92172.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030)|similar to ATPUMP1/UCP1 (UNCOUPLING PROTEIN 1), binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to SfUCPa [Symplocarpus foetidus] (GB:BAA92172.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030) 0.113321967878951 1.11479467792475 0.289618948270764 1 0.640490346373298 15.1044756013923 0.113321967878951 0.103354382344656 AT5G60940_at 6.94831652441216 6.50538695308043 7.24219468622401 6.92252572687372 7.87589243761763 7.25089716234721 6.63817742834989 5.81331639415681 6.90997674269554 6.14464534976602 7.7275915128661 7.55831498816899 6.92581612972525 7.41527872899097 7.78722279492885 7.35572576327557 7.1477022479202 7.38206736722329 6.49510505031206 0.197421844262352 0.185855036058436 0.181872639738639 0.189158292738733 0.187628524430442 0.192472822131661 0.189681070343697 0.193387656230437 0.196175345595779 0.190281090155093 0.185330832652501 0.186906862035453 0.193663885283217 0.187296618185737 0.192216551292780 0.183410254249296 0.184770420489018 0.187772636654361 0.184811752734337 5 0|5 /|+ 24542032 24542799 24542315.2 24540204 24543038 + gene protein_coding_gene TRUE TRUE AT5G60940.1|AT5G60940.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to Os03g0754900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051309.1); similar to 36I5.2 [Oryza sativa (japonica cultivar-group)] (GB:AAG45490.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046)|similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative cleavage stimulation factor subunit 1 [Sorghum bicolor] (GB:AAM47578.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.164571317887138 -1.11465315144702 0.289676930386914 1 0.640347858287703 13.8641087420804 -0.164571317887138 0.20251016685245 AT5G09240_at 5.76994039111375 5.76554069025539 6.09134396749268 6.44605096466089 6.63111555872834 6.21109745717484 6.22236554277088 6.22799014947659 6.11411374469474 5.70130323526165 7.57134869899926 7.9680170639371 7.47046885455417 7.51485106012893 8.10572534058876 7.27786357197314 6.93454763947971 7.5496160304915 6.25795662854178 0.224858969434600 0.217199094047982 0.22218737032922 0.219806359327211 0.210433347840128 0.224128833091332 0.224816171572565 0.220084066587233 0.217161662624501 0.212268368742099 0.215201321271739 0.216967288481514 0.212107498618596 0.217884887963677 0.217472042527674 0.210433347840128 0.224187301052499 0.212472440303229 0.212613322149829 5 5|0 -|/ 2873896 2874725 2874384.556 2873661 2874850 - gene protein_coding_gene TRUE TRUE AT5G09240.1|AT5G09240.2|AT5G09240.3 transcriptional coactivator p15 (PC4) family protein similar to KIWI, DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G09250.1); similar to Os01g0706000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044014.1); similar to Os02g0553600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047113.1); similar to ENSANGP00000015817 [Anopheles gambiae str. PEST] (GB:XP_320484.2); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173)|similar to KIWI, DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT5G09250.1); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044); contains InterPro domain Transcriptional coactivator p15; (InterPro:IPR003173) -0.109816297788892 -1.11402171554548 0.289935733130210 1 0.63971230256635 12.9574369162184 -0.109816297788892 0.0951459598290889 AT5G07310_at 1.65417394221425 1.74709355623796 1.81812559153629 1.71548550037922 1.08816916188900 1.57933638918396 1.47537447389091 1.45536434005949 2.19693658865471 1.85755607070403 1.91290141454865 1.83032091083428 1.82392425302644 1.70583626493952 2.07644101561310 1.79092678295938 2.15024739551345 1.89755505098569 1.41558144725781 0.190658863329834 0.193925417709562 0.195800411745534 0.190658863329834 0.191797253824879 0.190658863329834 0.193159906322065 0.196879060857116 0.204814350284976 0.197546150339316 0.200046910387071 0.190658863329834 0.200485836913267 0.192169435150350 0.197685340707566 0.202073825578789 0.199708879545393 0.194311355392086 0.191362159092418 5 5 + 2305891 2306636 2306373.727 2305685 2306661 + gene protein_coding_gene TRUE TRUE AT5G07310.1 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G61890.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80204.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.107110425094342 -1.11381201500664 0.290021721257558 1 0.639501295461604 3.42757895521959 -0.107110425094342 0.0883790513051773 AT5G22870_at 1.18731598599830 1.01857158026008 0.819147741226485 1.08362775582020 0.899199208439083 1.02495717399659 0.924355208640154 1.45045552793632 1.82277946942253 0.94274484333892 1.63466039804123 2.2475127623013 1.19347229827522 1.62713672702182 2.03387996665648 1.22684732203162 0.975640706839366 1.45487674717903 1.50587902187626 0.218742660608775 0.213326414868184 0.215340323853461 0.211830529427246 0.215875105708790 0.219847373291076 0.214067324496785 0.214099828770537 0.214717850756505 0.219103610016906 0.215961334895952 0.222349487995357 0.219246760143342 0.213247436292186 0.222793961920950 0.215892187492709 0.215586087120813 0.221577765559116 0.219215498463895 5 5 - 7647110 7647596 7647395 7647059 7647682 - gene protein_coding_gene TRUE TRUE AT5G22870.1 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related similar to harpin-induced protein-related / HIN1-related / harpin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G08160.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79600.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) -0.115214947628902 -1.11268355989876 0.290484784437924 1 0.638366337225545 2.53748101158423 -0.115214947628902 0.108213969792869 AT5G38480_at 10.3512823789571 10.3465708732206 10.5722796864708 10.7864318435597 10.7912945124873 10.3273882387365 10.7438962964422 10.7219116527178 10.4725693038662 10.0607261492678 11.0571994905890 11.4208043298577 11.0239070061481 11.1825931766443 11.246827297583 10.9800121495246 10.6687418808471 11.1221959989543 9.92763376977326 0.1106222481709 0.105649491208032 0.106768276666732 0.107497182559361 0.106696378197007 0.116041556425803 0.109396215899169 0.108396301675400 0.112764091758726 0.115297644369389 0.107133927149566 0.104193155874524 0.109520581330323 0.105395352822807 0.110230305919704 0.103562596103404 0.119574128022561 0.106454769210521 0.112919529283656 5 5|0 +|/ 15427824 15428491 15428037.25 15426927 15428746 + gene protein_coding_gene TRUE TRUE AT5G38480.1|AT5G38480.2 GRF3 (GENERAL REGULATORY FACTOR 3); protein phosphorylated amino acid binding general regulatory factor, a 14-3-3 gene Identical to 14-3-3-like protein GF14 psi (General regulatory factor 3) (14-3-3- like protein RCI1) (GRF3) [Arabidopsis Thaliana] (GB:P42644;GB:Q945L2); similar to GRF5 (GENERAL REGULATORY FACTOR 5), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G16050.1); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to 14-3-3 family protein [Malus x domestica] (GB:AAV50005.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 psi (General regulatory factor 3) (14-3-3- like protein RCI1) (GRF3) [Arabidopsis Thaliana] (GB:P42644;GB:Q945L2); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to 14-3-3 family protein [Malus x domestica] (GB:AAV50005.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) -0.106930788726381 -1.11142641395106 0.291001327392341 1 0.637102995488288 21.2008460556095 -0.106930788726381 0.0885078938137099 AT5G05100_at 8.85207388116575 8.74700693818762 9.78102942837712 9.78603316403346 10.0419009949086 9.77560931764464 8.20100868779593 8.33737000419879 8.88620764381156 8.4483440123311 9.11002771289126 8.9426640765045 9.03226488508693 8.97104142909434 9.03530818142344 9.25575572683033 9.13407652665222 9.13011135883775 8.6311344013029 0.127959014521725 0.125928288873172 0.125993420959458 0.129876629509749 0.126863394508419 0.131319537814198 0.127771267545675 0.129741067668894 0.126058267864813 0.132760101955644 0.130299893857997 0.125784586934461 0.129051282766493 0.126479986993284 0.122523424235012 0.127864774008473 0.127696164245177 0.125731497510931 0.136549799193406 5 5|0 -|/ 1505639 1506116 1505804.889 1505123 1507224 - gene protein_coding_gene TRUE TRUE AT5G05100.1 nucleic acid binding similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G10770.2); similar to Os05g0411600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055538.1); similar to DIP1 [Zea mays] (GB:AAZ73119.1); contains InterPro domain Single-stranded nucleic acid binding R3H; (InterPro:IPR001374) 0.0957579562124238 1.11064453908387 0.291322945383323 1 0.636317825200425 18.0560715135291 0.0957579562124238 0.0548803695998444 AT5G04000_at 1.54230760519828 1.81645402755997 2.10110934405044 2.21617525064276 1.93099166930568 2.21391575618846 1.92820201997126 2.08985727796929 1.60888171237025 2.11061173918769 2.36325123614417 2.04395229498311 2.62866842694742 2.34803541344861 2.2075617072683 2.59906886630531 2.17812044944151 2.19072519081196 2.34883590621570 0.176752682490581 0.177184586388434 0.176752682490581 0.180299486594699 0.177385331142251 0.191689785508377 0.183566618654786 0.185335111227046 0.179749160431622 0.196667326078633 0.176752682490581 0.17762995056902 0.180673544669174 0.179361814798264 0.178338519277660 0.182419300832971 0.18311251350071 0.183020737025391 0.176752682490581 5 5 - 1079308 1079702 1079458.182 1079102 1079839 - gene protein_coding_gene TRUE TRUE AT5G04000.1 similar to Os05g0496000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055935.1) 0.102365303674493 1.11044545888402 0.291404879178754 1 0.636117974312415 4.15122631924077 0.102365303674493 0.0763355254472926 AT5G45070_at 2.13224743898859 2.03301232731449 2.60426336756200 2.8532104008987 2.10160613554805 2.22743092714750 1.86755930513088 2.02176362577785 1.95340643690767 2.02749809147891 1.90198718529492 1.83693437949957 2.19269368609133 2.17028278020039 2.40420558598497 1.68587937386881 2.35636294761497 2.54480009055332 1.97535511302439 0.199301667870831 0.19672566461243 0.198380909706788 0.200409237797433 0.205048519515249 0.197393581508065 0.19672566461243 0.197874241170665 0.200250177782271 0.202676904563938 0.209397888882006 0.19672566461243 0.207725167228019 0.217764159802157 0.200822502378925 0.198550071950853 0.202408155746146 0.205957210367489 0.206605439291200 5 5|0 -|/ 18205126 18205780 18205450.3 18204857 18206658 - gene protein_coding_gene TRUE TRUE AT5G45070.1 ATPP2-A8 (Phloem protein 2-A8); transmembrane receptor similar to ATPP2-A6 (Phloem protein 2-A6), transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45080.1); similar to TIR-NBS-LRR type disease resistance protein [Populus trichocarpa] (GB:ABF81468.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.0964617873142203 1.10966580258347 0.291725926850581 1 0.635335567101328 4.29116825810044 0.0964617873142203 0.0577684057082178 AT5G05940_at 1.15747584716825 1.60600709404149 1.60079718886638 1.43558021294565 1.30075332217019 1.12479321300481 1.55457010915697 1.98528656355854 1.90606559313238 2.40428759331557 2.49805401674705 3.11697798785377 2.33327305486662 2.13104092657702 2.66845998076196 2.38559240674315 1.97474904646895 2.31522430606251 2.14440582054706 0.219935907806112 0.225175301302332 0.221345895853068 0.228329605869452 0.216870106720286 0.220716543594437 0.217491362305557 0.223469711795662 0.231808108318457 0.222158023749099 0.222253618691320 0.226186153232593 0.216870106720286 0.224705695601927 0.233591015991949 0.217590834439574 0.227022330541390 0.224716361740216 0.217949636823829 5 5 + 1787683 1788339 1788029.182 1785928 1788437 + gene protein_coding_gene TRUE TRUE AT5G05940.1 ATROPGEF5/ROPGEF5 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. similar to ATROPGEF7/ROPGEF7 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] (TAIR:AT5G02010.1); similar to Os01g0849100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044808.1); similar to Os05g0454200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055718.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAG13489.1); contains InterPro domain Protein of unknown function DUF315; (InterPro:IPR005512) -0.117921433636373 -1.10771551021928 0.292530213514907 1 0.633380259856045 3.7604118445766 -0.117921433636373 0.115436094058774 AT5G56510_at 0.591508467544169 0.383331187226590 0.697664852945689 0.65387147482553 0.423414086125655 0.597146847483443 0.00434660858957224 0.563872474033748 0.659641312029086 0.569368489443697 0.397432222550156 0.53603820330266 0.507830518654963 0.203985804965727 0.105957506866677 0.302379004239788 0.583047945843649 -0.176063537082512 0.714183991061089 0.209140523372833 0.209140523372833 0.211820471620201 0.216934751639426 0.211189539231248 0.212225913101267 0.209140523372833 0.214951054271809 0.230368001792975 0.211651257843013 0.222682460971500 0.217849058543848 0.214020974470713 0.226213116056559 0.215597928856281 0.211273171692947 0.211201155648749 0.210365341975818 0.209140523372833 5 5|0 +|/ 22900271 22901042 22900711 22898947 22901068 + gene protein_coding_gene TRUE TRUE AT5G56510.1 APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding similar to APUM7 (ARABIDOPSIS PUMILIO 7), RNA binding [Arabidopsis thaliana] (TAIR:AT1G78160.1); similar to Os11g0579900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068151.1); similar to Os12g0488900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066792.1); similar to Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] (GB:CAL57619.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Pumilio/Puf RNA-binding; (InterPro:IPR001313) -0.114469673514123 -1.10695578561387 0.292843980163437 1 0.632619304058894 0.967048111269597 -0.114469673514123 0.107865668345095 AT5G11400_at 1.07387704445968 0.842914220221134 1.06619448737147 1.07149291621778 0.848214333804597 1.17143538875368 0.970506457768813 0.910789864236648 0.908253377857768 0.919088102680867 1.05556240185756 0.90316856522707 0.999130454001113 0.95759620902576 1.01556713437076 1.00680255931351 0.998210909506163 1.06898356274840 0.469844413408309 0.201862722078916 0.204016101941007 0.199136690209317 0.211705120560092 0.206575780267238 0.199136690209317 0.21496725000054 0.203224559539430 0.203454909054527 0.206859827553229 0.206790261155612 0.199136690209317 0.207967509170883 0.206821327954491 0.20980167344228 0.203461194582826 0.201616864925442 0.207426395465354 0.203809592614878 5 0|5 /|- 3636691 3637275 3636929.6 3636615 3638060 - gene protein_coding_gene TRUE TRUE AT5G11400.1 protein kinase-related similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G11410.1); similar to serine/threonine kinase-like protein ABC1063 [Hordeum vulgare subsp. vulgare] (GB:ABF18545.1); similar to Os06g0727400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058637.1); similar to protein kinase ABC1063 [Hordeum vulgare subsp. vulgare] (GB:ABD39229.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) 0.099701620231396 1.10626650437072 0.293128877706233 1 0.631929256455617 1.87760626701519 0.099701620231396 0.069526166883311 AT5G35940_at 1.87188474194210 1.63256104291673 2.02574215504438 2.17314470251406 1.89199036175696 2.03108169763924 1.79520017848654 1.66076110911423 2.00827466167285 2.09741004735776 2.09232175583105 1.82257810504662 1.90824097277804 2.08583221118818 1.60432299223212 1.46613093511230 2.18991230972727 2.07747984132144 2.10782443360911 0.199711403245415 0.203298521821477 0.197018107467627 0.194237702753051 0.195488754716464 0.198689118626999 0.194237702753051 0.201054215324852 0.199449346611704 0.196550749715624 0.194237702753051 0.194872349973976 0.196479197543286 0.20514078904027 0.201192884028555 0.196245227131574 0.209185702563102 0.202398515142321 0.196385879137963 5 5 + 14109282 14109977 14109600.909 14108055 14110038 + gene protein_coding_gene TRUE TRUE AT5G35940.1 jacalin lectin family protein similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT5G35950.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Jacalin-related lectin; (InterPro:IPR001229) -0.0964561147117436 -1.10547543975368 0.293456107672372 1 0.631137723679314 3.87380680098571 -0.0964561147117436 0.059047815206635 AT5G48010_at 1.15258097536081 1.37384004468906 1.45231371625866 1.59046716209588 1.03713463960041 1.28827103623726 1.07125971934789 1.41302310208904 1.42691196216114 1.29016242347698 1.34933561293164 1.24833335956049 1.61886482981969 1.20752806294903 1.34656935486531 1.37376077588013 1.17399482268067 1.54944910511680 1.71249434363983 0.202630110409218 0.204490240528875 0.20367496156142 0.206689797082705 0.2069729127982 0.207931975762131 0.201813408930728 0.204429735320089 0.211271020058781 0.215207558893479 0.209347599842619 0.208475484929521 0.202130057193182 0.213245004009519 0.207696625689741 0.205127811528891 0.207649129015144 0.213119371056637 0.20686753792736 5 5 + 19477898 19478725 19478250.909 19474186 19478915 + gene protein_coding_gene TRUE TRUE AT5G48010.1|AT5G48010.2 pentacyclic triterpene synthase, putative Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT4G15370.1); similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT1G78500.1); similar to ATPEN1 (Arabidopsis thaliana pentacyclic triterpene synthase 1), catalytic/ lyase [Arabidopsis thaliana] (TAIR:AT4G15340.1); similar to beta-amyrin synthase [Euphorbia tirucalli] (GB:BAE43642.1); similar to beta-Amyrin Synthase [Panax (GB:BAA33722.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpene synthase; (InterPro:IPR002365); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) -0.105411727176441 -1.10490787993121 0.293691056220258 1 0.630570098966221 2.71486249957727 -0.105411727176441 0.0861655228405773 AT5G40290_at 1.17520408416716 1.25609053855677 1.34307463710554 1.7728609219288 0.819893665192569 1.18408650984778 0.732882600697978 1.19613946291931 1.67199719480454 1.17436531892286 0.981779823095653 1.12001507172257 1.53715656675072 0.57260522071312 1.25033571783751 1.00241366311712 1.18216933730996 1.81800647532474 1.51542213425958 0.210669555467907 0.209731664767022 0.213647295410182 0.20611972790526 0.219042781327922 0.20611972790526 0.20611972790526 0.210491821242623 0.20646358893253 0.21370283100409 0.215232671164368 0.209963712339871 0.212871094819803 0.20611972790526 0.20611972790526 0.210110014688146 0.210440239221610 0.207909631445478 0.211692548620265 5 5|0 -|/ 16122716 16123732 16123332.9 16122487 16125729 - gene protein_coding_gene TRUE TRUE AT5G40290.1 metal-dependent phosphohydrolase HD domain-containing protein similar to metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40270.1); similar to Os01g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041793.1); similar to Metal-dependent phosphohydrolase (ISS) [Ostreococcus tauri] (GB:CAL49984.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain Metal-dependent phosphohydrolase, HD subdomain; (InterPro:IPR006674) -0.122900512608936 -1.10404968145988 0.294046592989210 1 0.629712232605688 2.50352327779178 -0.122900512608936 0.126992202666432 AT5G02900_at 1.00636891979399 1.13715024955316 1.52709769572994 1.54654612803377 1.02533744981066 1.42966158986014 1.04474574238853 1.20488095504557 1.05823234573146 1.48183880408308 1.59530751722623 1.43181354697733 1.19457224713764 0.886173410847965 1.33328308886109 1.14429849890111 1.22115399703011 1.72181964394137 1.14766535906214 0.182525230291050 0.185567479135891 0.189891948678865 0.186732229396204 0.182525230291050 0.182525230291050 0.185888865011196 0.183737446502985 0.184863356045518 0.184686001677660 0.182525230291050 0.182525230291050 0.187397578855825 0.187529853355744 0.186825418249690 0.188311462420269 0.188046715568775 0.187368003956673 0.185270981463959 5 5 + 675081 675531 675292.182 674058 675567 + gene protein_coding_gene TRUE TRUE AT5G02900.1 CYP96A13 (cytochrome P450, family 96, subfamily A, polypeptide 13); oxygen binding member of CYP96A similar to CYP96A2 (cytochrome P450, family 96, subfamily A, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G32170.1); similar to CYP96A12 (cytochrome P450, family 96, subfamily A, polypeptide 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G39510.1); similar to Cytochrome P450 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABF93892.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.102568394825552 1.10383910936903 0.294133879893878 1 0.629501821164464 2.51287271468909 0.102568394825552 0.0786596353952848 AT5G45000_at 5.34091415848673 5.84058470986413 6.36358708440763 6.0517344920877 3.59388336353693 3.01243996049803 1.56714436614415 1.66311676314921 2.84847510448075 1.93995323258033 2.19262892738370 2.27191431327915 1.86580556275717 2.41645297051780 1.81656151696119 2.04074077794950 2.42267861482169 2.89319021193614 1.65084167244596 0.296582396976809 0.298415978858944 0.300453505165982 0.314517728306851 0.281538747144465 0.277435737522386 0.279131051567335 0.278463234574627 0.279338355108191 0.276632775760056 0.274351204298297 0.274255987138372 0.278548516758825 0.274255987138372 0.279866008233729 0.276151617581372 0.279917843478931 0.274255987138372 0.275776392240905 5 5 + 18183472 18183938 18183674 18182610 18184420 + gene protein_coding_gene TRUE TRUE AT5G45000.1 transmembrane receptor similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51270.2); similar to Leucine Rich Repeat, putative [Medicago truncatula] (GB:ABE91519.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) 0.131278174964948 1.10343004303197 0.294303504087446 1 0.629093156099394 6.37238558649838 0.131278174964948 0.144187857232169 AT5G03210_at 3.09768307359168 2.47305107773298 4.16230185736243 3.74520186847715 5.71815744903085 3.71600251492757 3.70415244995173 2.74941803723916 3.19469845395329 2.92142126452796 3.56409180097473 3.22882321556897 3.82010389321882 3.45101050404431 3.45109234065434 3.2275913055229 4.18231181802495 3.75819591742354 3.28773818814961 0.252030388978058 0.246186632251367 0.277621318170886 0.296880272780318 0.287867581627475 0.259312648862826 0.261424513893475 0.247673305893643 0.246186632251367 0.254102681928913 0.246991421189005 0.246186632251367 0.247750990853753 0.246186632251367 0.253891379751564 0.246186632251367 0.250402468606449 0.253583830022608 0.258694637452959 5 5 - 763077 763170 763126.636 762786 763320 - gene protein_coding_gene TRUE TRUE AT5G03210.1 unknown protein 0.288528764075771 1.10333402867143 0.294343328469218 1 0.62899725298995 7.03075699185887 0.288528764075771 0.405268740134593 AT5G10120_at 1.21419238499828 1.28810421973698 1.41475951979953 1.18800800705023 0.867344448598025 1.11291360719836 1.37477976279677 1.05893044238559 0.990995778412482 1.08538296080899 1.21971180858644 1.03130419156597 1.20179480138832 1.30658411161721 0.967343770583284 0.683338600508905 1.05243961371382 1.21088428381193 1.08731045243833 0.174333864454415 0.171654424201344 0.171654424201344 0.180461498577351 0.184266244604364 0.172585936308787 0.171654424201344 0.176269527656468 0.184981826023804 0.177302058099639 0.175877284193742 0.174175415959429 0.171654424201344 0.174332017359259 0.176033229306364 0.174474628880670 0.177838195782912 0.175830439046201 0.174511327643379 5 5 + 3170725 3171101 3170929.636 3169733 3171148 + gene protein_coding_gene TRUE TRUE AT5G10120.1 ethylene insensitive 3 family protein Identical to Putative ETHYLENE-INSENSITIVE3-like 4 protein (EIL4) [Arabidopsis Thaliana] (GB:Q9LX16); similar to ethylene insensitive 3 family protein [Arabidopsis thaliana] (TAIR:AT5G65100.1); similar to 52O08_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67573.1); contains InterPro domain Ethylene insensitive 3; (InterPro:IPR006957) -0.103141278835635 -1.10255450525111 0.294666808814318 1 0.628218873050212 2.25924815487476 -0.103141278835635 0.0806041388733077 AT5G14330_at 1.82370187659951 1.91529364937750 2.18571555868050 2.47594384324401 2.06346040806854 1.95470954309306 1.78187061592577 1.91466787739097 1.68595231245048 2.42778918040185 2.28159583100929 2.37610514793871 2.22422833343005 2.24144369350121 2.48440977915431 2.13001458313154 1.70924167185666 2.49161612083285 1.88454498519750 0.251731639008296 0.244852513248163 0.250063526470967 0.261503350303603 0.247587989791628 0.244969025985495 0.252203518832375 0.248369256881780 0.261562149974646 0.247312588623830 0.248328730598831 0.244742081755213 0.240777673568009 0.247911044744879 0.258740165207032 0.249257423205958 0.246555569558267 0.240777673568009 0.250450211256245 5 5 - 4620032 4620520 4620308.091 4619800 4620554 - gene protein_coding_gene TRUE TRUE AT5G14330.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01730.1) 0.096592664830345 1.1024108084333 0.294726468765731 1 0.628075433731467 4.1353007821092 0.096592664830345 0.0604660457577685 AT5G35750_at 6.66675943664057 6.62271261566815 7.16074850612473 6.97390414523698 8.53079158088016 8.3375507282849 6.56089511045739 7.20097156165177 7.28290233510297 6.96610441799877 8.30889771717442 7.71188947971508 8.25217121792747 8.19707772997308 7.80647120837935 7.96640027786675 7.72784016717674 7.71721206120616 7.36172712606406 0.189355834733674 0.184277122689771 0.195324441859265 0.182968557712268 0.187353402286936 0.188045462323779 0.183809933806993 0.189782691455082 0.19068254223029 0.191240187306425 0.188210561118711 0.187484918528245 0.184203872385894 0.182563646884988 0.189330860259701 0.181039306590576 0.189666938784363 0.191772042909966 0.184464331611103 5 5 - 13928994 13929608 13929328.727 13928601 13933567 - gene protein_coding_gene TRUE TRUE AT5G35750.1 AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) Encodes histidine kinase AHK2. similar to AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) [Arabidopsis thaliana] (TAIR:AT1G27320.1); similar to WOL (CYTOKININ RESPONSE 1) [Arabidopsis thaliana] (TAIR:AT2G01830.1); similar to cytokinin receptor [Catharanthus roseus] (GB:AAM14700.1); similar to histidine kinase 3 [Zea mays] (GB:BAD01585.1); similar to cytokinin receptor histidine kinase [Oryza sativa (japonica cultivar-group)] (GB:BAE97709.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase A, N-terminal; (InterPro:IPR003661); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain CHASE; (InterPro:IPR006189); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase related protein, C-terminal; (InterPro:IPR004358); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) -0.119580488431371 -1.10207078755126 0.294867675371007 1 0.627736080080801 14.8390781816927 -0.119580488431371 0.120380738476976 AT5G56980_at 3.97289291353548 4.3016849062562 5.73433331856029 6.05800493367257 5.39755054051455 4.87073838559675 5.47577090405946 5.5148632036717 5.27184812236393 4.18711447950088 5.4525126632813 6.12869569737514 5.6292984816501 5.68742203781221 5.44823440743825 6.44141435694279 6.13601175000315 4.99275441556177 4.8550718949508 0.249282000119144 0.250207026482390 0.246927097063819 0.254847292933868 0.24611594336802 0.248490685440377 0.251220436587052 0.245844776960948 0.251822720418237 0.2494268060217 0.24358644964114 0.243312286494785 0.246272172056049 0.242156482035768 0.242156482035768 0.247743235414697 0.24407754224314 0.256523437063665 0.255146282287907 5 5 - 23073885 23074361 23074113.909 23073306 23074968 - gene protein_coding_gene TRUE TRUE AT5G56980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26130.1); similar to cDNA-5-encoded protein (GB:AAA50235.1) -0.119974847708832 -1.10145768748815 0.295122419813532 1 0.627124388978804 10.4211737924984 -0.119974847708832 0.121376196663072 AT5G23530_at 0.442134419987714 0.388172625930296 0.567795632749077 0.194523163301092 1.06628150765954 0.813999361034405 1.09476596787539 0.74231320545073 0.92639114319877 1.07197856602069 1.46716175094996 1.60569337174812 1.42362879308007 1.28773796066883 1.4866952292276 1.57570904374898 1.31559871670978 0.993651035271362 1.13017717572089 0.234280473256841 0.225359315288754 0.237134979771751 0.227859961515628 0.230549090668638 0.230631669680709 0.230279822751826 0.224143353828563 0.229662029585492 0.224143353828563 0.226302876406470 0.231593320449046 0.226832663798505 0.225620363739182 0.229519498186485 0.22689759042349 0.226961520115984 0.224143353828563 0.227160091997347 5 5 - 7933376 7933935 7933684.909 7932969 7934439 - gene protein_coding_gene TRUE TRUE AT5G23530.1 similar to ATGID1C/GID1C (GA INSENSITIVE DWARF1C) [Arabidopsis thaliana] (TAIR:AT5G27320.1); similar to Esterase/lipase/thioesterase [Medicago truncatula] (GB:ABE80317.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.109942386134007 1.09764733878886 0.296709418057778 1 0.623328740816255 1.88241496015972 0.109942386134007 0.099429421595836 AT5G14580_at 1.69279721569005 1.40932291253962 2.14321227910245 1.86864027793825 1.52952274809087 1.72016189528736 1.71330677218745 1.73294386562172 1.68358563149965 1.32526936880461 1.90484616860823 2.0165457414366 1.92219394948642 1.36088224273179 2.03409239332263 1.84002097839965 2.13444979249132 1.60367751629702 1.70239194845498 0.188335749348800 0.186000814362708 0.180246262925783 0.183835505813491 0.180246262925783 0.183982387377887 0.184559628878314 0.185551233449694 0.180246262925783 0.191245495057958 0.188855299114419 0.184776917451625 0.189508377690402 0.181882936452102 0.186013868414164 0.184141550247945 0.189612800728005 0.182986495499655 0.182006424993559 5 5 - 4697849 4698290 4698082.818 4697243 4703069 - gene protein_coding_gene TRUE TRUE AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative similar to RIF10 (RESISTANT TO INHIBITION WITH FSM 10), 3'-5'-exoribonuclease/ RNA binding / nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G03710.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Acylphosphatase; Transcription termination factor NusA; Polyribonucleotide nucleotidyltransferase [Medicago truncatula] (GB:ABE87905.1); similar to putative polyribonucleotide nucleotidyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD21450.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029); contains InterPro domain Exoribonuclease; (InterPro:IPR001247); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.101013883400754 1.09732045252504 0.296845869422379 1 0.62300359313816 3.43749061952378 0.101013883400754 0.0759227641549647 AT5G24820_at 1.44179156833409 1.4654399073407 2.57866826205067 1.96158590262106 1.10221231190378 1.24111898240999 1.27934492822370 1.67154161987569 1.90338715173794 1.68863044146017 1.47945389799150 1.5926906730762 1.54549472788790 1.54946004039439 0.978746288922648 1.46368041369466 1.33658809729105 1.54205134155489 1.54324188766985 0.203373246838831 0.208133659769366 0.221696721991841 0.219417588217735 0.207364377922671 0.204999032034969 0.210946248279557 0.209604587652954 0.203373246838831 0.206763080227017 0.203373246838831 0.203373246838831 0.203373246838831 0.203373246838831 0.203886928380765 0.203373246838831 0.216258881153140 0.210272893243038 0.204821861070132 5 5 + 8524078 8525266 8524745.818 8523409 8525300 + gene protein_coding_gene TRUE TRUE AT5G24820.1 aspartyl protease family protein similar to CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1), aspartic-type endopeptidase/ pepsin A [Arabidopsis thaliana] (TAIR:AT5G33340.1); similar to Aspartic proteinase nepenthesin-1 precursor (Nepenthesin-I) (GB:Q766C3); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.122975449388488 -1.09675503258726 0.297082004909560 1 0.622441358757437 3.16659985804045 -0.122975449388488 0.128860457154879 AT5G55050_at 4.85020781390257 5.34793291191401 6.65390114333331 6.79379399593724 5.95191418074743 5.16022447274418 5.99329176928613 6.40699753640256 4.2634849438331 4.26341548844251 5.01036541300765 4.75191524523028 5.98327833773521 5.80614275604325 4.91152467385101 6.34183211665092 5.64277124236 5.18427735015559 4.36271566847349 0.226417951672575 0.224189611332573 0.229906124740227 0.237160394926769 0.224907821619336 0.243284230970849 0.231548954627431 0.228473231063822 0.232340136540626 0.226168707548033 0.225079409392764 0.221250317467342 0.230173090219144 0.221250317467342 0.225198909719128 0.223552290546097 0.226698658029655 0.22520111452175 0.232935867101546 5 5|0 +|/ 22356158 22356942 22356584.9 22354927 22357326 + gene protein_coding_gene TRUE TRUE AT5G55050.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G50400.1); similar to putative GDSL-like lipase/acylhydrolase [Oryza sativa (japonica cultivar-group)] (GB:AAP05801.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.148347706593775 -1.09497360708122 0.297826920392420 1 0.620671448089516 10.7700590240979 -0.148347706593775 0.178609293377230 AT5G42950_at 7.62371216454457 7.64487369291537 8.38307603672366 8.52246930253852 8.89462928337455 8.32443208213122 7.3832359088309 7.3342703372515 7.86283534217518 7.19489178764364 8.15287949273199 8.38486749283467 7.91111760554625 8.35462783566254 7.821724490353 8.24871297719484 7.86350302949774 7.8898582891951 7.34788329377131 0.157689330144851 0.160724738928027 0.165261918240127 0.157518100231066 0.161712230522158 0.161437107757480 0.159387325937677 0.167239304858815 0.156996562531027 0.161902589321373 0.158085965118454 0.163204036937191 0.166493322844183 0.159609449186115 0.160727239457257 0.156608821823101 0.152330631886869 0.163740714475515 0.15908072697872 5 5|0 +|/ 17247472 17248195 17247898.1 17241664 17248583 + gene protein_coding_gene TRUE TRUE AT5G42950.1 GYF domain-containing protein similar to GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G27430.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83483.1); contains InterPro domain GYF; (InterPro:IPR003169) -0.110621398872171 -1.09380862330293 0.298314839711120 1 0.619515209289849 15.7873114557840 -0.110621398872171 0.101999653236089 AT5G59030_at 9.78689148153663 10.1723518377340 10.5293405684390 10.5716012569619 11.2162456172679 11.0640942458901 9.85920526588016 10.0678512751554 10.0101889568378 9.42433728490458 10.4528481100492 10.3180996081953 10.5256463125745 10.3615237347889 9.9127855676241 10.3716256656067 10.4387076729370 10.3186469782969 9.70777451529579 0.108541936763439 0.100148445358908 0.101315509612478 0.0996858692360218 0.100936471502809 0.104758689959776 0.0994977970711635 0.0997374494902519 0.105553929356055 0.101869429174253 0.0982999329264684 0.0969937402179377 0.099772382368685 0.100338457221315 0.100954379801636 0.098398916616374 0.098967400651669 0.101385258577862 0.0972412401175052 5 5 - 23851186 23851644 23851389.636 23850954 23851737 - gene protein_coding_gene TRUE TRUE AT5G59030.1 COPT1 (COPPER TRANSPORTER 1); copper ion transporter encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains Identical to Copper transporter 1 (COPT1) [Arabidopsis Thaliana] (GB:Q39065); similar to COPT2 (Copper transporter 2), copper ion transporter [Arabidopsis thaliana] (TAIR:AT3G46900.1); similar to putative copper transporter protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56072.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) 0.102304752073215 1.09353822937491 0.298428173747931 1 0.619246982527217 20.4342405479107 0.102304752073215 0.0806235749780057 AT5G16430_at 1.23926563514517 1.42491690989941 1.78063278894874 1.82791646796792 1.06977555029857 1.83183820098350 1.29669853623501 1.41008956954151 1.56037946157152 1.35127281074792 1.25224534289410 1.97572879511771 1.59515437054757 1.30079455743224 1.47321470904488 1.54519308186375 1.47499198444659 1.78103151893608 1.21839325069125 0.204884844063545 0.204026222095345 0.203242402254179 0.204169628367484 0.207278394984962 0.203845066256173 0.206320818421846 0.204513551806696 0.202986017335513 0.207187616081837 0.20568633956104 0.206092192907531 0.206654032477983 0.202912338980294 0.202585256012443 0.203667683371197 0.209638677470098 0.202341694695105 0.210080720183413 5 5 + 5370390 5370572 5370470.091 5370353 5370610 + gene protein_coding_gene TRUE TRUE AT5G16430.1 similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G45730.1); contains domain Cysteine-rich domain (SSF57889) 0.126687365979866 1.09314995754549 0.298590973263274 1 0.618861913240414 2.94837977539694 0.126687365979866 0.137390489055255 AT5G15780_at 1.26826133650235 1.57562721954606 0.90258900139244 1.32970653412503 1.11133397466041 1.29423337966627 1.59237181515667 1.18003223252688 1.29037113480609 1.44852241305403 2.31001660121070 2.48546255662729 2.08929543637064 1.48329580001174 2.20328787045256 2.01419941803432 1.43399123136662 2.18008350554029 1.27512526680704 0.218788740394586 0.209895772870535 0.217799518586142 0.219104479713667 0.209895772870535 0.215915001651832 0.209895772870535 0.212501487168110 0.217131694660569 0.211771987269361 0.211170096823273 0.210528700922974 0.216736767728916 0.218263460677731 0.218245118222765 0.215063146177225 0.217119778705936 0.214184555500486 0.225017090521697 5 5 - 5145361 5145465 5145391.273 5144730 5146406 - gene protein_coding_gene TRUE TRUE AT5G15780.1 pollen Ole e 1 allergen and extensin family protein similar to CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN), lipid binding [Arabidopsis thaliana] (TAIR:AT3G22120.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96850.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) 0.118166119690362 1.09087914205800 0.299544470946429 1 0.616611968523596 2.96324959870076 0.118166119690362 0.119943149626888 AT5G46210_at 10.0007844836561 10.0577138320074 10.5871118854045 10.5397766818924 10.8018225539232 10.4881111016929 10.0525573562235 9.96110649980043 9.8093283127176 10.1085485645916 10.5107136067128 10.6163441455786 10.5126772505476 10.4601142688517 10.4164992722107 10.5554557472595 10.4148010837816 10.4408871031553 10.0349595093052 0.0934470894043185 0.0873543036195058 0.0933878971566792 0.0916362781032825 0.0892771852068257 0.0950544585713605 0.089474679771742 0.0901126364832107 0.0977810770825837 0.0924161791197069 0.0885655491290842 0.0900804786794329 0.0909231315825275 0.0897107269755106 0.0920789270856016 0.0873543036195058 0.0918801267382738 0.0923432868729727 0.092316120230417 5 5|0 -|/ 18748883 18749936 18749434.75 18748645 18754037 - gene protein_coding_gene TRUE TRUE AT5G46210.1 CUL4 (CULLIN4); protein binding / ubiquitin-protein ligase Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. similar to ATCUL3/ATCUL3A/CUL3/CUL3A (Cullin 3A), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G26830.1); similar to putative cullin protein [Oryza sativa (japonica cultivar-group)] (GB:AAT75245.1); similar to Cullin-4B, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99238.1); similar to putative cullin protein [Olea europaea] (GB:AAL27655.2); contains InterPro domain Cullin; (InterPro:IPR001373) -0.0948535371531292 -1.09048993980925 0.299708127443820 1 0.616226710648436 20.5487307269752 -0.0948535371531292 0.0579822760692304 AT5G08580_at 5.85241029529923 5.92302659390062 6.92107017432098 6.46521385342127 7.4593254345704 7.17289231735419 5.77466772073183 6.20077405878337 5.63062504940374 5.37859551568817 6.9497731833453 7.42222162966492 7.02926013117418 6.74313806779989 7.01337954527694 6.42874683933858 6.71323348651097 6.6361806371473 5.81287094527622 0.209399691823648 0.204049091746411 0.203106252123462 0.197966316771751 0.202941306823715 0.203737832358397 0.209348224120403 0.198423509770672 0.215246732460051 0.19846425601835 0.1984856998954 0.197002861830628 0.197002861830628 0.198631236877677 0.198789137398089 0.197002861830628 0.197002861830628 0.197002861830628 0.198148903549201 5 0|5 /|- 2780977 2781671 2781319.5 2780513 2783067 - gene protein_coding_gene TRUE TRUE AT5G08580.1 calcium-binding EF hand family protein similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27790.1); similar to Os01g0572700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043383.1); similar to Os02g0221800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046324.1); similar to calcium binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD45102.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) 0.117868581621489 1.09022619116811 0.29981907053865 1 0.615965696102717 12.7083503194586 0.117868581621489 0.119445607089349 AT5G41700_at 12.4870380964924 12.3413176803441 12.8771752131363 12.8788173148802 13.2714659109840 13.0000359662776 12.2490455538621 12.39107057454 12.8099148928696 12.672152591584 13.4936905924721 13.0538657763711 13.4384182171676 13.3119737636977 12.8672513238886 13.2177572640264 13.0662453232071 13.2791122608089 12.8621078700781 0.0854424474975214 0.084107483576223 0.0917135723727921 0.0876991430393937 0.0866556282812899 0.093878686317333 0.083076519488121 0.0824758591493415 0.0874731280120544 0.0820504661609449 0.0834722980153322 0.0820504661609449 0.0857824779676626 0.082069899001183 0.0842012089623475 0.0820504661609449 0.0911863535520034 0.08551763802941 0.0832352888401632 5 5|0 +|/ 16693329 16694408 16694046.5 16693006 16694737 + gene protein_coding_gene TRUE TRUE AT5G41700.1|AT5G41700.2|AT5G41700.3|AT5G41700.4 UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin-protein ligase One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 Identical to Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC 6.3.2.19) (Ubiquitin- protein ligase 8) (Ubiquitin carrier protein 8) (UBCAT4A) (UBC8) [Arabidopsis Thaliana] (GB:P35131;GB:Q42308;GB:Q43276;GB:Q8LE19); similar to UBC28, ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G64230.2); similar to ubiquitin carrier-like protein [Arachis hypogaea] (GB:ABI84263.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608)|Identical to Ubiquitin-conjugating enzyme E2-17 kDa 8 (EC 6.3.2.19) (Ubiquitin- protein ligase 8) (Ubiquitin carrier protein 8) (UBCAT4A) (UBC8) [Arabidopsis Thaliana] (GB:P35131;GB:Q42308;GB:Q43276;GB:Q8LE19); similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to UBC10 (ubiquitin-conjugating enzyme 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G53300.2); similar to ubiquitin conjugating enzyme E2 [Solanum lycopersicum] (GB:CAA51821.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.0949314680839022 1.08908819677596 0.300298115916551 1 0.614840064968761 25.685711338839 0.0949314680839022 0.0587067274584159 AT5G23270_at 1.97023042076628 1.82706863194689 1.96580777101579 2.65569701002677 1.44637171785529 2.19754993108784 1.80433517564850 1.78556288098036 2.4543466565668 2.22647408639607 2.07991789379601 2.23518410874833 2.34923251262992 2.27878092179119 1.90011374592419 1.81092673569690 1.99370553817503 2.37090919176969 2.14837322767187 0.203744780752357 0.217644647617427 0.212862602458655 0.214485299653713 0.217001350797070 0.211409123817435 0.208907825924951 0.203744780752357 0.223226814224722 0.210820133083809 0.207430544748443 0.210152646822824 0.208951648186472 0.207011466697125 0.209265894406534 0.207429809849542 0.203744780752357 0.208089948453557 0.211876857860314 5 5|0 +|/ 7840170 7840733 7840478.1 7838909 7841029 + gene protein_coding_gene TRUE TRUE AT5G23270.1 STP11 (SUGAR TRANSPORTER 11); carbohydrate transporter/ sugar porter Identical to Sugar transport protein 11 (Hexose transporter 11) (STP11) [Arabidopsis Thaliana] (GB:Q9FMX3;GB:O81708); similar to STP4 (SUGAR TRANSPORTER 4), carbohydrate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT3G19930.1); similar to monosaccharide transporter (STP9) [Arabidopsis thaliana] (TAIR:AT1G50310.1); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT3G19940.1); similar to putative monosaccharide transporter 1 [Petunia x hybrida] (GB:AAC61852.1); similar to monosaccharide transport protein 1 [Zea mays] (GB:AAT90503.1); similar to monosaccharid transport protein [Vicia faba] (GB:CAB07812.1); contains InterPro domain Sugar transporter; (InterPro:IPR003663); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain General substrate transporter; (InterPro:IPR005828) -0.147307666214868 -1.08869518491062 0.300463692371680 1 0.614451536574954 4.15845010305496 -0.147307666214868 0.178260043984786 AT5G66960_at 0.879236902845468 0.876869182366413 0.781574819717117 0.763754755944763 1.00942458257345 0.728234768548425 0.89989512365713 1.01737889077400 0.721628711697416 1.06869401972870 1.10791984896666 0.858337629962293 1.24413741634352 0.97741550596979 0.825925374250356 1.04124159939110 1.32490286992290 1.27938314886861 1.33940668864934 0.208400851727332 0.215506614456713 0.208400851727332 0.214812511150727 0.209488424529963 0.210038051064178 0.212411748308817 0.221780152577517 0.215474448074178 0.21474732299116 0.213000544987466 0.211412992916147 0.216986160798755 0.213908398836687 0.210167107894229 0.210134051734869 0.209320979861020 0.216582781679472 0.213707702262713 5 5 - 26753525 26754014 26753746.909 26753435 26756719 - gene protein_coding_gene TRUE TRUE AT5G66960.1 prolyl oligopeptidase family protein similar to prolyl oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT1G69020.1); similar to putative oligopeptidase [Oryza sativa (japonica cultivar-group)] (GB:BAD38028.1); contains InterPro domain Peptidase S9A, prolyl oligopeptidase, N-terminal beta-propeller; (InterPro:IPR004106); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S9A, prolyl oligopeptidase; (InterPro:IPR002470) -0.0932981220324433 -1.08824446982880 0.300653665130472 1 0.614006098398822 1.93237166042062 -0.0932981220324433 0.0528293991684545 AT5G20200_at 4.76035793932855 5.06278404980868 5.77515877116174 5.86946797257954 5.95030239231298 5.42950209102337 4.49913507073847 4.63233334598683 4.49436290276352 4.28341264172585 5.33528226089038 5.8923818004065 5.52219475146459 5.51451080151537 5.34090144848749 5.88117872789092 5.15373717494453 5.30819586970396 4.43872067440151 0.208979264848247 0.201185981023307 0.204050393500162 0.19730682051728 0.19730682051728 0.214837960173243 0.200858738961637 0.197610927006030 0.217874363812424 0.201173454832458 0.21173605054415 0.201385285463717 0.202239609759623 0.205083405416602 0.200555890879311 0.203026027155772 0.205458837891377 0.20211456273903 0.198377927757460 5 5 + 6820787 6821598 6821231.636 6816709 6821812 + gene protein_coding_gene TRUE TRUE AT5G20200.1 nucleoporin-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10650.1); similar to Leishmania major strain Friedlin proteophosphoglycan ppg4 [Leishmania major strain Friedlin] (GB:XP_843162.1) 0.112554980192515 1.08796647027548 0.300770885435310 1 0.61373142564166 10.1969035011391 0.112554980192515 0.107979802430367 AT5G47640_at 8.45724912079023 8.68401798795719 9.66448976304562 9.70857159933108 9.84709148858284 9.89377577104768 9.83422500116103 9.7020810917059 8.24623326237923 8.54059027066925 9.01572349543464 8.81342458087463 9.5843593940831 9.38126843700178 8.64095702858687 9.2502327829126 10.0099322750291 9.38425585797829 8.86828932115296 0.120053252836251 0.117938958369696 0.119418018475692 0.116372098321533 0.117618257097447 0.114728582173731 0.116621323404772 0.121495740770009 0.12042379784613 0.130258092984208 0.116046356807578 0.126962032168461 0.116607106361555 0.113279896496880 0.121310528803437 0.113279896496880 0.116699287553943 0.117549063864577 0.120773168186128 5 5 + 19326643 19327185 19326848.364 19326453 19327498 + gene protein_coding_gene TRUE TRUE AT5G47640.1 CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) Identical to Nuclear transcription factor Y subunit B-2 (AtNF-YB-2) (Transcriptional activator HAP3B) (NFYB2) [Arabidopsis Thaliana] (GB:Q9FGJ3;GB:O23634;GB:Q9FV58); similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family [Arabidopsis thaliana] (TAIR:AT4G14540.1); similar to transcription factor Hap3b, putative [Brassica oleracea] (GB:ABD64993.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-like transcription factor CBF/NF-Y/archaeal histone, subunit A; (InterPro:IPR003956); contains InterPro domain Histone-like transcription factor/archaeal histone/DNA topoisomerase; (InterPro:IPR003957); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.091754319181856 -1.08727284970514 0.301063507222561 1 0.613046345228001 18.3797994860634 -0.091754319181856 0.0467596015118199 AT5G62000_at 9.86049495124806 9.79609570090762 10.4807124921231 10.5415246815860 11.1354395275935 10.6858968779938 10.4386940477583 10.1215343414762 8.76959558888666 9.02656475359043 9.66424449535117 9.78703549370169 10.3235479518017 9.7477493176706 9.6337917587419 9.9740290767834 10.1374405740011 9.8373431061344 9.14500528156164 0.104487930817092 0.103589718688495 0.105744656471666 0.106248350425703 0.109113941023747 0.106350555445328 0.107527800586150 0.105852058605971 0.116033509464549 0.120404892180317 0.105714803288178 0.105312155719983 0.105496458549334 0.106034765787435 0.105996884167824 0.103741447865659 0.105291750622185 0.104409604611579 0.112800586357018 5 5|0 +|/ 24929010 24931882 24930766.667 24927584 24932440 + gene protein_coding_gene TRUE TRUE AT5G62000.1|AT5G62000.2|AT5G62000.3 ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor|ARF2 (AUXIN RESPONSE FACTOR 2) Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. Identical to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP) (ARF2) [Arabidopsis Thaliana] (GB:Q94JM3;GB:O23671;GB:Q9C5W5;GB:Q9FIT6); similar to ARF1 (AUXIN RESPONSE FACTOR 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G59750.3); similar to auxin response factor-like protein [Man (GB:AAP06759.1); similar to putative auxin response factor [Brassica napus] (GB:CAG30068.1); similar to auxin response factor 2 [Lycopersicon esculentum] (GB:ABC69711.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response factor; (InterPro:IPR010525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.107681767251304 1.08716143015771 0.301110532701400 1 0.612936329431378 19.8168172091456 0.107681767251304 0.0964341984433327 AT5G05320_at 5.22858655921556 5.84144896679308 5.47781376128944 5.28786152675404 6.18842135918433 6.1821303072695 2.56844682096629 2.81294367626333 3.66629602769676 2.91489068151411 3.40743675788321 3.43012910356669 2.7921861039912 3.70344496845165 2.85759598354425 2.60585509243692 3.55885284698853 3.36741546429395 2.83573128484541 0.261128692069945 0.264831782755534 0.268762461268395 0.257377206273342 0.273069111392771 0.265005730200971 0.251964781685843 0.254608065757661 0.256927267459672 0.251017672735588 0.251964951873062 0.255146218692304 0.25546506132786 0.252066364729842 0.263062128048074 0.255452464341605 0.258769480461635 0.259928910401104 0.252855506161140 5 5 - 1575135 1575700 1575384.727 1575007 1576732 - gene protein_coding_gene TRUE TRUE AT5G05320.1 monooxygenase, putative (MO3) similar to monooxygenase, putative (MO2) [Arabidopsis thaliana] (TAIR:AT4G38540.1); similar to monooxygenase [Solanum tuberosum] (GB:BAC23045.1); similar to Os03g0154100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049002.1); similar to Os03g0153900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049000.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.117062498861932 1.08534989343604 0.301875892768905 1 0.611148855658833 8.12562522463193 0.117062498861932 0.118829528451902 AT5G07630_at 6.3701554895514 5.89261630631232 6.06233965978858 5.59298731653386 8.07639472375792 7.17409902277218 6.97752009184117 5.8070069615641 5.85450986665862 5.31778510331533 6.7080841935821 7.35076492333778 6.90373333084571 7.36555392800176 6.51040024518819 7.31853490036528 6.3926846313799 6.46414961648921 5.81419384798312 0.247503939848120 0.233518517664236 0.257148176890223 0.249851158508702 0.227306349677785 0.254134642061022 0.236577802823714 0.226892030753355 0.240563985607651 0.227412429207837 0.235689975143254 0.224956664972345 0.225760139350403 0.228526634002974 0.250291745790418 0.224956664972345 0.244422805746083 0.236941782431004 0.236144436359424 5 5|0 +|/ 2413368 2414311 2413816.889 2412033 2414524 + gene protein_coding_gene TRUE TRUE AT5G07630.1 nuclear division RFT family protein similar to nuclear division RFT1-like protein [Capsella rubella] (GB:AAR15470.1); contains InterPro domain RFT1; (InterPro:IPR007594) -0.206157376902472 -1.08504171642557 0.302006242765675 1 0.610845004822235 12.7635905267491 -0.206157376902472 0.280784795163489 AT5G66440_at 4.85764741016058 4.98073143848666 4.89583045168124 5.00765682355652 4.58042166413282 5.2117880217204 3.74300504074224 3.80396119701849 3.85202472918260 3.49984751820714 4.60697813703011 4.95189492833137 4.30470315203791 4.09515585157189 4.90346600929131 4.31103262022084 4.04262493788492 4.29984564856128 3.5016011020301 0.204873133128552 0.211317265254800 0.209837505861294 0.210250091404770 0.206993269093935 0.218981444834756 0.212058009685968 0.203343373954738 0.212676043943982 0.211413622260176 0.210588626570644 0.209254161945821 0.204496151226497 0.209069384517974 0.204265377867548 0.207020130073211 0.215235733013147 0.202866950720274 0.211506961939277 5 5 - 26547503 26547984 26547789 26547461 26548323 - gene protein_coding_gene TRUE TRUE AT5G66440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34560.1); similar to hypothetical protein [Thellun (GB:ABB45849.1) -0.114638968091592 -1.08502054675209 0.302015198503640 1 0.610824134811404 8.66377381114878 -0.114638968091592 0.113478733076713 AT5G43940_at 11.6346768267150 11.801374184169 12.0299737426865 12.23115780968 12.0630949350641 12.004805025301 11.3077677641088 11.4228557188761 11.3719236634517 11.4214786057175 12.1186015816334 12.199605579751 12.0006803662744 11.986418397561 12.1373255852073 11.8822650023691 11.8422382750750 12.2816788764120 11.3258780379277 0.0717898552844129 0.0698150792789074 0.0697695381037659 0.0703978284239292 0.0712178861845483 0.0747985455681766 0.0734412898913622 0.070018634431124 0.079003858601741 0.0715045399189084 0.0750660925087776 0.0724434626729476 0.0700431208790437 0.0744664938129349 0.073112756776209 0.0702367188096769 0.0744706115349108 0.0725032068996592 0.070944463815551 5 5|0 +|/ 17702703 17703582 17703201.6 17701418 17703755 + gene protein_coding_gene TRUE TRUE AT5G43940.1 ADH2 (ALCOHOL DEHYDROGENASE 2); formaldehyde dehydrogenase (glutathione) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Identical to Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH- FDH) (ADH2) [Arabidopsis Thaliana] (GB:Q96533;GB:Q43384;GB:Q9FND2); similar to ADH1 (ALCOHOL DEHYDROGENASE 1), alcohol dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G77120.1); similar to class III ADH enzyme [Oryza sativa] (GB:AAB19117.1); similar to alcohol dehydrogenase class III-like protein [Solanum tuberosum] (GB:ABB72806.1); similar to glutathione-dependent formaldehyde dehydrogenase (GB:AAB06322.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) 0.0923990023445631 1.08470243867946 0.302149797132932 1 0.610510568101301 23.5265608226922 0.0923990023445631 0.0504257620100588 AT5G65130_at 1.34547657519803 1.80380882312927 1.90980139922229 2.2410312942982 1.14621242966057 1.94939527494970 1.20098100545280 1.57157658635528 1.90092730532128 1.90228808606088 1.37590076420598 1.80365874844891 1.4765679573044 1.17807270982391 1.68242679271696 1.47427215591161 1.36646494834198 1.9357311304116 1.94152178117100 0.219552588344117 0.23060416359141 0.221697988108068 0.215704099791286 0.22702520359764 0.224502559930279 0.222937438149945 0.221766935314856 0.23208552454842 0.242689080172058 0.215704099791286 0.215704099791286 0.221651197387281 0.215704099791286 0.218086023148520 0.218487715734651 0.231821316954821 0.231087471541654 0.216267217235714 5 5 + 26034901 26035402 26035174.545 26034629 26035462 + gene protein_coding_gene TRUE TRUE AT5G65130.1 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT4G39780.1); similar to DREB2 [Glycine max] (GB:AAQ57226.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.148407566855686 -1.08312559794121 0.302817669268832 1 0.608957303667685 3.37181006940663 -0.148407566855686 0.181684771615682 AT5G16490_at 2.12323054440629 1.46862621600829 1.79407406081745 1.92175713040889 1.97156873175927 1.79280971376648 1.97620133701449 1.96601415875431 2.26054287568892 2.44630788214123 3.22214956195192 3.54260151284522 2.67379537713400 3.19700150031004 3.32178282022691 3.14829496128955 3.10328239630073 2.8139080871637 2.52408741064732 0.218421166773739 0.208501387626084 0.210354746353089 0.209423391035682 0.215190523699137 0.211168839701247 0.216229212900618 0.211912092000176 0.212838528862609 0.208501387626084 0.213279417474802 0.210933902282129 0.210475349346129 0.216954466179382 0.216536278244218 0.219939588127078 0.217420996529978 0.208640416084571 0.216806946674434 5 5|0 -|/ 5384507 5385171 5384796.4 5384308 5385216 - gene protein_coding_gene TRUE TRUE AT5G16490.1 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. similar to RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) [Arabidopsis thaliana] (TAIR:AT4G04900.1); similar to Wiscott-Aldrich syndrome, C-terminal [Medicago truncatula] (GB:ABD28373.1); contains InterPro domain PAK-box/P21-Rho-binding; (InterPro:IPR000095); contains InterPro domain Wiscott-Aldrich syndrome, C-terminal; (InterPro:IPR011026) 0.117026819986465 1.08219601727309 0.303211920860807 1 0.608042452729133 4.64586761160623 0.117026819986465 0.119504032778469 AT5G41100_at 3.16385820187157 3.60212214477212 4.39955978253392 3.97416277383729 4.31787055130507 3.62204973531391 3.10492863999586 2.84421071425972 2.87248554835570 3.09494771235183 4.01667519081556 3.87261096498201 3.84994164882211 3.28041233641327 3.6062668782863 3.79140462129267 2.69519308073942 3.45348176981799 3.10204766819308 0.234579577668132 0.235689020455021 0.233974121216671 0.235212952202527 0.23477472401976 0.245320501860976 0.237217630085183 0.233726541823112 0.256391042214252 0.236992587973544 0.231622421816305 0.246318392513518 0.233694226863849 0.243859259983757 0.235530105578505 0.237461261887345 0.247799031822821 0.234675864172834 0.238506168547044 5 5 + 16467318 16467741 16467495.818 16464450 16468109 + gene protein_coding_gene TRUE TRUE AT5G41100.1|AT5G41100.2 DNA binding similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G26910.2); similar to Os09g0509300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063628.1); similar to Os04g0394700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052655.1); similar to hydroxyproline-rich glycoprotein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD38129.1); contains InterPro domain IHF-like DNA-binding; (InterPro:IPR010992) 0.139992523943079 1.08104911385812 0.303698881726053 1 0.606914572735019 6.92554962850104 0.139992523943079 0.166454690323203 AT5G58400_at 1.24915312841189 1.08466319365630 1.10336713802624 1.18098310804687 0.870115805185015 1.35715298223183 0.90944581150977 1.27386118324783 1.34963031041708 1.53499465804151 1.41405784705832 1.36888925834858 0.949926131101144 1.21795436189363 1.28176917601522 1.11556324775739 1.39585397316903 1.96471425448727 1.30969470956751 0.188821603880049 0.191090084555861 0.188623478695813 0.189638936395369 0.188623478695813 0.196594688883068 0.190976450044513 0.193954871178186 0.19285084167243 0.190265237909656 0.196994432606769 0.189412222752652 0.197253493307404 0.191415785296722 0.193356893930632 0.196533002306349 0.204599843735813 0.194602851338875 0.197275811215464 5 5 - 23622601 23623030 23622764.455 23622428 23624254 - gene protein_coding_gene TRUE TRUE AT5G58400.1 peroxidase, putative Identical to Peroxidase 68 precursor (EC 1.11.1.7) (Atperox P68) (PER68) [Arabidopsis Thaliana] (GB:Q9LVL1); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58390.1); similar to class III peroxidase [Gossypium hirsutum] (GB:AAL93151.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.112612986043194 -1.08069373391035 0.303849892443546 1 0.606565278063285 2.49694158907489 -0.112612986043194 0.109870626487460 AT5G26130_at 2.35973552104193 2.14135187328635 1.99299154398308 2.39251665105988 2.01456396413454 2.58088622599282 1.97682765895767 1.80733451742971 2.20374349191283 2.70019270862490 2.45022372641493 2.08168555346520 2.26471026589488 2.78302177393387 2.62693277829825 2.66723959467726 2.68563955676723 2.39310119415200 2.42922506350786 0.216283336552235 0.218874009437926 0.217111588359203 0.223085259292653 0.214603234991996 0.209926486626305 0.209305917984483 0.216952514952756 0.213238635423461 0.210834444438520 0.212308453484639 0.208999200645408 0.213713726229130 0.209962691689095 0.211094223984708 0.213019838374772 0.216925636644988 0.21207927992682 0.212599194952460 5 5 - 9128139 9128547 9128360.091 9128113 9128607 - gene protein_coding_gene TRUE TRUE AT5G26130.1 pathogenesis-related protein, putative similar to pathogenesis-related protein, putative [Arabidopsis thaliana] (TAIR:AT4G33710.1); similar to pathogenesis-related protein 1a [Malus x domestica] (GB:ABC47922.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) -0.121035594437747 -1.07833960137428 0.30485167235027 1 0.604253736003365 4.62750419121857 -0.121035594437747 0.129127141984394 AT5G60750_at 8.17696321484751 8.0422132994027 8.88019114725949 8.79664935117514 9.04431117719124 8.68628091792739 7.90201768023554 7.86325900217988 8.07695313080627 7.68011147484432 8.53353884014741 8.44745462080188 8.7042128853347 8.52778046416544 8.51495240104507 8.69919484165188 8.18661940543458 8.4797412850415 7.70522628979364 0.154661506210712 0.153491584398747 0.161168678172031 0.153285549491592 0.160316604367170 0.164549474155102 0.157290614631114 0.163689545402783 0.166182425845717 0.166949509542376 0.158330386720484 0.154811419849205 0.159075964788025 0.171867345297370 0.156375699534668 0.153285549491592 0.175427577291099 0.166116808819671 0.165938346219869 5 5 + 24449854 24450355 24450079.909 24448117 24450586 + gene protein_coding_gene TRUE TRUE AT5G60750.1 CAAX amino terminal protease family protein similar to CAAX amino terminal protease family protein [Arabidopsis thaliana] (TAIR:AT1G14270.1); similar to Abortive infection protein [Medicago truncatula] (GB:ABE87113.1); contains InterPro domain Abortive infection protein; (InterPro:IPR003675) -0.0967144296110947 -1.07808047080430 0.3049620964055 1 0.60399953577861 16.5902109611611 -0.0967144296110947 0.068093145083042 AT5G54740_at 1.77066940552587 1.57743822142301 1.92810318047025 1.99552133060344 1.67138159722301 2.21364882782248 1.56138545916537 2.33023464138455 1.96472058858330 2.16003875822561 1.89313020336030 1.94131290067117 2.30820063672559 2.13511340844972 2.25331476028781 1.78597639839506 2.26415998154495 1.86633023891396 2.30423506353868 0.207361234505604 0.206036942727930 0.206624941547236 0.209200420144210 0.213204261841763 0.206630607034215 0.214646289212854 0.207007318146786 0.204790337422789 0.210515005730860 0.211862645641690 0.208294314505603 0.213811824035614 0.212515843166316 0.217220919477946 0.207393978011063 0.216262714054310 0.219259169442374 0.206558770709385 5 5 - 22255873 22256281 22256034.273 22255584 22256413 - gene protein_coding_gene TRUE TRUE AT5G54740.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to 2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1 [Arabidopsis thaliana] (TAIR:AT4G27140.1); similar to Sweet protein mabinlin-2 precursor (Mabinlin II) (MAB II) [Contains: Sweet protein mabinlin-2 chain A; Sweet protein mabinlin-2 chain B] (GB:P30233); contains InterPro domain Napin/ Bra allergen; (InterPro:IPR000617); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.139555181673264 -1.07698571635732 0.305428943098074 1 0.602926141230621 3.9805180593653 -0.139555181673264 0.166624441940570 AT5G15730_at 6.8220627292088 6.81109049140828 7.9117640397878 7.78994095549772 8.23759396888487 6.80452040946178 6.15054900372225 5.54102087710508 6.02746768679635 5.13363687660486 6.81550234109778 6.70703673911675 6.54149237472095 7.06951195011581 6.02100861291679 6.45530274202116 5.73461695818318 6.74851621697367 4.97123311516177 0.184132832148771 0.191499024696132 0.198935760789338 0.190751267358087 0.197536387654035 0.211018824703922 0.192153552725167 0.18484026748918 0.188839149941525 0.195497398616086 0.187492636745617 0.184132832148771 0.184803098229685 0.187961835483218 0.184723233759091 0.189644438319034 0.199921485955706 0.194047783309766 0.200037037461103 5 0|5 /|+ 5132426 5132984 5132608.667 5130513 5133190 + gene protein_coding_gene TRUE TRUE AT5G15730.1|AT5G15730.2 serine/threonine protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G54590.2); similar to hypothetical protein [Cleome spinosa] (GB:ABD96839.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.198140941436682 1.07580998975206 0.305930924538804 1 0.601774310482611 12.9531025017584 0.198140941436682 0.270330308198648 AT5G58080_at 1.69377054865348 1.08045848037371 1.52572706836994 1.37207270921519 1.44044693713987 1.17000798723823 1.51824522874748 1.33712866698915 1.77414817874314 1.41316196790829 1.71283105801609 1.37493332810161 1.94424366083325 1.49305626793923 1.58960542503270 1.64506584647807 1.60960557463829 1.18474629854890 1.51955321867541 0.206245993773747 0.191842577287078 0.211935188374758 0.192748767500290 0.195276292041378 0.207705975790136 0.19691500197964 0.202217281669626 0.212700534657525 0.191442489459411 0.195568395822287 0.193564894397421 0.209321993222026 0.195123232233378 0.196213370345988 0.196312235173994 0.192491079549669 0.20587751176384 0.195725373502102 5 5 - 23519016 23519653 23519448 23519011 23521369 - gene protein_coding_gene TRUE TRUE AT5G58080.1 ARR18 (ARABIDOPSIS RESPONSE REGULATOR 18); transcription factor/ two-component response regulator member of Response Regulator: B- Type Identical to Two-component response regulator ARR18 (ARR18) [Arabidopsis Thaliana] (GB:Q9FGT7); similar to ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT2G25180.1); similar to Two-component response regulator ARR18 (GB:Q9FGT7); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) -0.117924787249295 -1.07559048631468 0.306024711887443 1 0.601559378055113 2.96133989711961 -0.117924787249295 0.123063865767636 AT5G62390_at 9.39169105615232 9.6129388477213 9.70114409323789 9.77639404098314 10.2282139082642 10.1381297710684 9.16047795511878 9.26667096658977 9.69417293132687 9.17556869389093 10.3006948090045 10.3355914363285 9.81567962210997 10.1073017972164 10.4180507195346 10.0207530293131 9.37370012307987 9.99728439670483 9.45174633103894 0.0953687846054464 0.0934652490859269 0.0981184414416487 0.0951911759463744 0.0953891799654312 0.100301813891778 0.100891456909828 0.0950662161810998 0.107361581792756 0.108161823447964 0.0913484290460712 0.0917518564497675 0.0971952413946422 0.0920312564889322 0.0934454619349435 0.0917921817661056 0.100160240580266 0.0919218490229157 0.0970082399609332 5 5|0 -|/ 25069622 25070562 25070042.3 25069204 25071515 - gene protein_coding_gene TRUE TRUE AT5G62390.1 ATBAG7 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 7); calmodulin binding A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to calmodulin-binding protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67696.1); contains InterPro domain IQ calmodulin-binding region; (InterPro:IPR000048) -0.090777284515307 -1.07484412894349 0.306343771852318 1 0.600828821519878 19.4027715684322 -0.090777284515307 0.0470776271822925 AT5G62540_at 8.5859536395157 8.42548159436197 9.6441503277011 9.51672298611952 9.8455310923698 9.478217553669 9.13863964678285 9.14527271097762 8.53340595229092 8.82470683133217 9.4132929398157 9.55678686538 9.75013466457033 9.52093569418163 9.44622901817154 9.42172157605078 9.72981363174617 9.64958433286168 8.60959725914308 0.129297603161502 0.121228924712891 0.124357455170847 0.123033621494693 0.124195974123573 0.12623896297828 0.123637721310006 0.119561748269492 0.131831685448286 0.124903611384193 0.124264730928645 0.118323599984903 0.118323599984903 0.122013884994506 0.12632468345796 0.118323599984903 0.119891192012986 0.123210833124233 0.125648269427858 5 5|0 +|/ 25121948 25122662 25122395.375 25121160 25122845 + gene protein_coding_gene TRUE TRUE AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 29); ubiquitin-protein ligase Identical to Ubiquitin-conjugating enzyme E2-17 kDa 3 (EC 6.3.2.19) (Ubiquitin- protein ligase 3) (Ubiquitin carrier protein 3) (UBC3) [Arabidopsis Thaliana] (GB:P42746); similar to ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G02760.1); similar to ubiquitin carrier protein [Populus tomentosa] (GB:AAV84587.1); similar to Os03g0791800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051522.1); similar to Os05g0182500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054819.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) 0.0978462868356853 1.07410773268081 0.306658821180343 1 0.600108406824469 18.3309790379052 0.0978462868356853 0.0727966405472473 AT5G58670_at 8.93052082217225 9.0999694766373 9.69950546938509 9.62153807520393 10.1508714390874 9.86263226234728 8.98148481289012 9.07676584879193 9.86634596591326 9.57725800555692 11.0151300983391 10.2994930282651 10.5810166207018 10.7521735611242 10.5171757005374 10.1840839352838 9.39964345498351 10.7125216406055 9.57567476624817 0.104604765935324 0.102884560419734 0.108179497266578 0.103635042991331 0.100606187072452 0.105776862052962 0.105059734827285 0.107938260696433 0.112609845292362 0.101287365658738 0.101742073584746 0.100606187072452 0.101060201366114 0.100606187072452 0.102624164036366 0.100606187072452 0.113947473416954 0.10384040280771 0.104854522966257 5 5 - 23721695 23722355 23721971.909 23721457 23724026 - gene protein_coding_gene TRUE TRUE AT5G58670.1 ATPLC1 (PHOSPHOLIPASE C 1); phospholipase C phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one). similar to ATPLC1 (PHOSPHOLIPASE C 1), phospholipase C [Arabidopsis thaliana] (TAIR:AT4G38530.1); similar to phosphoinositide-specific phospholipase C (GB:AAC48991.1); similar to phospholipase C [Nicotiana tabacum] (GB:ABJ99758.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.0943613438837982 1.07309930870184 0.307090650134803 1 0.599122499470405 19.4807848595908 0.0943613438837982 0.0616599522341797 AT5G52820_at 7.68945033866183 7.8414943051771 8.4299594256382 8.5555075705408 8.08475602579291 7.93913776317645 6.65734811046431 6.85706870122026 6.68768563085753 6.0072795981148 6.91818216454781 7.15461881273575 6.9860602989602 7.08920815054394 6.94508775731804 7.16076592626277 7.45977840489997 6.91230363107035 5.96491018437538 0.212698775390718 0.220086093052505 0.224539824363312 0.222697302832388 0.230004709291323 0.222402442482797 0.208970957257725 0.211367568101492 0.215561269601257 0.219923746205360 0.215400113701135 0.207391148162411 0.210658037897694 0.209311571608002 0.209617181803918 0.207541773403622 0.216183248226309 0.209756079556760 0.225044623008766 5 5|0 +|/ 21420460 21421223 21420810.556 21418575 21421611 + gene protein_coding_gene TRUE TRUE AT5G52820.1 WD-40 repeat family protein / notchless protein, putative similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to Putative notchless protein homolog [Oryza sativa (japonica cultivar-group)] (GB:AAK00422.2); similar to notchless-like protein [Solanum chacoense] (GB:AAR88094.1); similar to Notchless, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46583.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain NLE; (InterPro:IPR012972); contains InterPro domain G-protein, beta subunit; (InterPro:IPR001632) -0.0924014031068758 -1.07220131548048 0.307475578714472 1 0.598245171803004 14.4059448372881 -0.0924014031068758 0.0547172185452817 AT5G20320_at 5.70587187328654 5.6323109431419 6.28864347105102 6.64601035851198 5.9787768266917 6.18500777605056 4.73560769799901 5.2262957456656 4.44322718741357 4.79011480980153 5.11032865644433 5.79929894152818 5.40449860418574 5.13486938531072 5.46058726618791 5.54524223866814 6.34412488306071 5.75030128668454 5.10104269201715 0.224065416995 0.217995796424894 0.228388050424030 0.231588690884269 0.223348859951587 0.242898181821882 0.222210499896670 0.229273392915377 0.241678078481769 0.226411946045621 0.215026036661784 0.2201152276628 0.223294301791538 0.239653743895479 0.217752178466460 0.223587768739205 0.224396550115165 0.221394906771325 0.230493329505939 5 5|0 -|/ 6859580 6860261 6859899.7 6859220 6869268 - gene protein_coding_gene TRUE TRUE AT5G20320.1 DCL4 (DICER-LIKE 4); RNA binding / ribonuclease III Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein. similar to DCL2 (DICER-LIKE 2), ATP-dependent helicase/ ribonuclease III [Arabidopsis thaliana] (TAIR:AT3G03300.1); similar to Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Type III restriction enzyme, res subunit; Ribonuclease III, bacterial [Medicago truncatula] (GB:ABE81761.1); similar to OSJNBb0065L13.5 [Oryza sativa (japonica cultivar-group)] (GB:CAE03362.1); similar to Dicer-like protein 4 (GB:P84634); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain Protein of unknown function DUF283; (InterPro:IPR005034); contains InterPro domain Ribonuclease III; (InterPro:IPR000999); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) -0.11230954339439 -1.07036187714434 0.308265204735427 1 0.596449873971526 10.9732079053012 -0.11230954339439 0.111674343725641 AT5G60120_at 3.38139062071206 3.39431441071245 3.37324795791865 3.26052674819865 4.02219117606911 3.92668367956791 2.99704468412929 3.47097244711901 3.23758165442803 2.86150461173435 3.73646508113737 3.91048216542393 3.63163914710208 3.91185254752659 3.62919937864062 3.81966280168011 2.83830959944351 4.35948781887074 3.23130240724734 0.285478048012702 0.264697847501736 0.264697847501736 0.278147377182105 0.264697847501736 0.279618643613832 0.268605056191019 0.274441180431164 0.314839141207366 0.268851425746375 0.274524485821922 0.280883624244557 0.264697847501736 0.264697847501736 0.291679232005456 0.275989466013621 0.294455066371895 0.266055646034415 0.274459001674306 5 5 + 24227017 24228182 24227658 24225012 24228950 + gene protein_coding_gene TRUE TRUE AT5G60120.1 TOE2 (TARGET OF EAT1 2); DNA binding / transcription factor similar to TOE1 (TARGET OF EAT1 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G28550.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE87891.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.101821921602243 -1.06815166711410 0.309216026815449 1 0.59429592157094 6.89817990319407 -0.101821921602243 0.0859373329047525 AT5G54520_at 3.65490422105954 3.94430261509431 4.33535319858645 4.16861689116635 4.67246997145405 4.24464024923588 3.03280751056962 3.42756480127837 3.5214441121099 3.46540281715819 3.83511033929353 3.42967751741435 3.9613667705017 3.6859049748994 3.95552386259334 3.98930450463425 3.06124257841701 4.03469327059087 3.35932095315615 0.223853070952290 0.222533076196663 0.234052468803739 0.235409478071815 0.232281773337773 0.229260271208927 0.223353521407623 0.227680901123532 0.230181915396529 0.228861488769672 0.238640242638485 0.226479632123152 0.222533076196663 0.234598503785031 0.238155552066707 0.223324908079586 0.227502970023277 0.227067045917935 0.226037231380393 5 5 - 22164039 22165301 22164379.364 22163740 22166346 - gene protein_coding_gene TRUE TRUE AT5G54520.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G10580.1); similar to Os02g0319800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046682.1); similar to PREDICTED: similar to pre-mRNA splicing factor-like [Strongylocentrotus purpuratus] (GB:XP_788503.2); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.113952579008075 -1.06752134781836 0.309487594075498 1 0.593682290854133 7.53149523468947 -0.113952579008075 0.116143277505411 AT5G21130_at 0.999814325225507 0.75148434942938 0.934736678415498 1.24788957094547 1.33966960148609 1.44271362215991 1.14256912438405 0.743223887257152 0.420909768309101 1.59711461994872 1.27080434648582 0.96633499222562 1.28563652816609 0.793588400524247 1.04159602965671 1.08096898884022 1.07709538851079 0.82614039312243 1.05061744514951 0.191073321885140 0.194032605484045 0.196845278345337 0.20126090114146 0.193313437012863 0.191073321885140 0.196982285049542 0.204346988851742 0.197673153365665 0.198531104773002 0.196855800889149 0.191574180553631 0.191073321885140 0.201499507169887 0.193939435208175 0.196064697543170 0.191073321885140 0.192861437102048 0.205205090789802 5 5 + 7186244 7186786 7186494.364 7185918 7186922 + gene protein_coding_gene TRUE TRUE AT5G21130.1 similar to harpin-induced protein-related / HIN1-related / harpin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT2G27080.2); similar to Harpin-induced 1 [Medicago truncatula] (GB:ABE82616.1); contains InterPro domain Harpin-induced 1; (InterPro:IPR010847) 0.106871290644221 1.06715838216952 0.309644056427226 1 0.593329065140195 2.10808826720152 0.106871290644221 0.099386304326915 AT5G44280_at 2.39346625337952 2.21492336952911 2.85942047013078 2.37631898700578 2.50220171259705 2.61496364191811 2.13798666443509 1.93536672243197 2.37535688495268 2.26314380455986 3.00781584608601 2.71783679397921 2.65558918727455 2.53309888488111 2.80498870294158 2.54578536701221 2.80040085195906 2.12597287027228 2.35116968064155 0.200096328004553 0.19319901251874 0.191178247982768 0.192209453285199 0.197045512223764 0.197577930563948 0.196389613317822 0.190083970124011 0.194250652936225 0.195011475684604 0.189318120976155 0.196324475768143 0.195396402315789 0.189500676155783 0.194975417955021 0.196037214480693 0.193711155284293 0.210476649712168 0.189318120976155 5 5 - 17853567 17854352 17854088.4 17853082 17856481 - gene protein_coding_gene TRUE TRUE AT5G44280.1 protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G03770.1); similar to Os01g0796700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044517.1); similar to Os05g0497600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055944.1); similar to putative ring finger protein 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD53026.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.106209445974937 1.06706967623916 0.309682303694831 1 0.593242754013807 4.86874407089615 0.106209445974937 0.0977467367673373 AT5G48990_at 4.79890939776092 5.07956929409895 5.43186123155394 5.51752643898056 5.79185929261034 5.50450575321539 4.79933078521871 4.63443203670915 4.12673156297624 4.30014523388452 5.22597445254095 5.55670570215217 5.07324603984357 5.00938193038521 5.20521539936871 5.33285742093035 5.33810898832879 4.80131373496137 4.40544487686 0.217919288200761 0.214986984545247 0.217618000435046 0.215990752301154 0.229303531557107 0.229838238281087 0.216870065754280 0.215924598048857 0.227582086436692 0.217201993314124 0.215882874218423 0.214986984545247 0.216892355013068 0.218852732418065 0.218655493928281 0.214986984545247 0.222120476885436 0.214986984545247 0.215213600044439 5 5 + 19880089 19880654 19880404.636 19879515 19880851 + gene protein_coding_gene TRUE TRUE AT5G48990.1 kelch repeat-containing F-box family protein encodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation. similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G48980.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.098353206327033 -1.06600194712545 0.310142956362702 1 0.592204295694156 9.9298947870039 -0.098353206327033 0.0765895756367185 AT5G50020_at 4.94873783779995 4.92941652382065 5.64405591829084 5.49736911255267 6.6443691649548 6.10507001876154 5.69274846521198 5.37958792913158 5.16959469780705 4.8966349703083 6.76407823831579 6.65408456196685 6.61584012420245 6.95893089185955 6.50060656866313 6.32921038965053 6.38400691923402 5.92806451757136 5.00987165731006 0.240524312787279 0.232966701308785 0.231765200948516 0.228503347914658 0.233294541594003 0.2369707358924 0.228079839762689 0.225161740736549 0.247036514857702 0.238448925428292 0.229174722830637 0.224688725770276 0.225799924776254 0.231403190653885 0.228277234517237 0.224688725770276 0.236415308224678 0.241954478464466 0.238461577597615 5 5|0 +|/ 20370677 20371325 20371028 20368568 20371662 + gene protein_coding_gene TRUE TRUE AT5G50020.1 zinc finger (DHHC type) family protein similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G24630.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE86020.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) 0.111514305868831 1.06586997551537 0.310199929159232 1 0.592075999062516 11.3762793137695 0.111514305868831 0.110917566986666 AT5G39600_at 6.01231651713992 5.94185823502139 6.45692034295277 6.57139774488747 7.3038692250634 6.94414067921148 4.92469324998557 5.39228730232007 5.21658474478747 5.23743017995153 6.30637398115474 6.57228110348763 6.5986132825148 6.08106552317062 6.33253341294 6.71877370262049 6.38915243334002 6.36760382881865 5.7114384423652 0.20419883748862 0.201953856070953 0.202029177511911 0.201747781341736 0.204689298971922 0.204911242626984 0.200182071564050 0.205625955920359 0.218639318345666 0.210382171216731 0.205539784309036 0.199734725832643 0.207019861796501 0.216112013855847 0.205340530205732 0.199734725832643 0.203602671169191 0.212410356346274 0.208550463275806 5 5|0 -|/ 15871651 15871945 15871798.2 15871157 15872420 - gene protein_coding_gene TRUE TRUE AT5G39600.1 similar to hypothetical protein [Prunus persica] (GB:AAO14625.1) 0.108884695474929 1.06565357834384 0.310293366032047 1 0.591865655041868 12.0980774691764 0.108884695474929 0.104711410202958 AT5G13020_at 8.11355462065004 8.06483511767412 8.73360542729497 8.63072241592376 9.2353571883579 8.79730875918424 7.78930118968913 8.00717972103319 7.84753506049508 7.43078275976436 8.44308296957206 8.47969344213344 8.36542487557387 8.57003393638172 8.17080457677175 8.56531367595419 8.08230404727498 8.27295956247246 7.71428983106327 0.154411283492848 0.150353536530298 0.153775151136866 0.158259802760094 0.154756269457069 0.154227027435054 0.15722033376495 0.148988003548515 0.166821638710704 0.148216578862062 0.162293779677318 0.151376283975872 0.147944113084573 0.153840543161824 0.159236537541881 0.148565711036318 0.167224095676906 0.154739837905439 0.147820895565275 5 5|0 -|/ 4129887 4131003 4130368.667 4129362 4132092 - gene protein_coding_gene TRUE TRUE AT5G13020.1 emsy N terminus domain-containing protein / ENT domain-containing protein similar to emsy N terminus domain-containing protein / ENT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G44440.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87186.1); similar to Os08g0328300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061559.1); similar to Os09g0279000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062755.1); contains InterPro domain ENT; (InterPro:IPR005491) -0.10193032074126 -1.06550300497159 0.310358393797145 1 0.591719313506318 16.4379353980798 -0.10193032074126 0.0869271999094523 AT5G57900_at 7.88530692386522 7.76536260902213 8.40994740275536 8.39861335366944 8.71414424668774 8.45401026017471 7.37514727587455 7.59726401034537 6.89437244397279 7.17407258987892 7.68210445592807 7.58777406772108 7.9475299858067 7.54510126754319 7.59128201161989 7.920224315154 8.31362069960957 8.16754807661622 6.82785318578237 0.154670303184665 0.150783759101772 0.149197226522682 0.151846289097636 0.157827886570807 0.151553085938222 0.147517380282289 0.155364400633183 0.161618596270861 0.167363900095411 0.150723636104707 0.151195101742415 0.145925357004033 0.150845815842924 0.148903472302267 0.146850936946634 0.153773900989800 0.152762698258367 0.148203398112690 5 0|5 /|- 23467198 23467659 23467423 23466937 23468159 - gene protein_coding_gene TRUE TRUE AT5G57900.1 SKIP1 (SKP1 INTERACTING PARTNER 1) F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner similar to F-box family protein (FBL19) [Arabidopsis thaliana] (TAIR:AT4G30640.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE78800.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) -0.0939485651321468 -1.06484950105983 0.310640740499256 1 0.591084365830185 15.4798899352382 -0.0939485651321468 0.0627596127064922 AT5G03415_at 5.05554564073184 5.4749514362555 5.53528414135939 5.75672619659951 6.53490583615163 6.00479057753767 4.77658955455833 5.03123735150912 4.67465413058275 4.38438313399945 5.83686338332655 5.8148556240737 5.65920365313993 5.12910778070658 5.56377642335008 5.65380532289386 5.02350467083535 4.88079241538392 4.8503272248350 0.217665585734019 0.215879716110384 0.227447945395354 0.220999153472182 0.229024508872962 0.236882125628946 0.215879716110384 0.218525713127947 0.227216304562688 0.220681774507814 0.217676108874997 0.219588262313376 0.215879716110384 0.233521753718121 0.215879716110384 0.220754360037681 0.236562794416372 0.216661817775226 0.215879716110384 5 5|0 +|/ 844334 845109 844826.7 842499 845414 + gene protein_coding_gene TRUE TRUE AT5G03415.1 DPB Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. similar to DPA, transcription factor [Arabidopsis thaliana] (TAIR:AT5G02470.3); similar to transcription factor DP1 [Populus tremula x Populus tremuloides] (GB:AAQ13675.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.120264369712751 -1.06477012775468 0.310675047008834 1 0.591007267325628 10.5621005863476 -0.120264369712751 0.130745689561408 AT5G36140_at 1.00166775299758 0.885937713045373 1.43445912654233 1.16192235305032 1.17467592367861 0.75267807579525 0.948250234197333 0.834038661029446 1.68897309721919 1.42147956647432 1.11017671623518 0.735999561668902 1.55948121811774 1.43911329438293 0.892051245074036 1.35372274151334 1.29410910053929 1.75632713712160 1.47688997458394 0.229968139508725 0.236032603914710 0.2386793604232 0.233107073610706 0.229968139508725 0.234458718002482 0.235956981210267 0.233570194294531 0.240702275324789 0.235315613378381 0.229968139508725 0.230510518262538 0.232931869992432 0.234178053405140 0.229968139508725 0.229968139508725 0.235825566366704 0.238354235719651 0.232678869925756 5 5 - 14229446 14230079 14229703.091 14229442 14230489 - gene protein_coding_gene TRUE TRUE AT5G36140.1 CYP716A2 (cytochrome P450, family 716, subfamily A, polypeptide 2); heme binding / iron ion binding / monooxygenase member of CYP716A similar to CYP716A1 (cytochrome P450, family 716, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G36110.1); similar to cytochrome P450 monooxygenase CYP716A12 [Medicago truncatula] (GB:ABC59076.1); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.103441353497834 -1.06401071267740 0.311003424202390 1 0.590269846710127 2.42257214983742 -0.103441353497834 0.0913748621228313 AT5G51230_at 3.96423670884937 3.89110367425140 4.19933230074936 4.24949774449955 4.6778125415526 4.21684142015336 3.74884386567713 3.69988181871775 3.9442403751586 3.9072004197323 4.64547747262621 5.05150929300616 4.93104265401907 4.70590884225374 4.72415037911311 4.85357487197619 4.98502565611346 4.41642359382157 3.90096342576074 0.186502635454667 0.187654256942652 0.190506664977172 0.189711466172799 0.191850701434274 0.197960837795064 0.193104086207586 0.20104409987658 0.193886268109897 0.196853434676882 0.187403165373086 0.187863898667636 0.185341150049986 0.191792248949261 0.189685023136955 0.184215035288601 0.194487378479985 0.192251682445123 0.193601866942239 5 5 + 20842912 20846542 20844927.526 20840962 20846790 + gene protein_coding_gene TRUE TRUE AT5G51230.1|AT5G51230.2 EMF2 (EMBRYONIC FLOWER 2); transcription factor Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Identical to Polycomb protein EMBRYONIC FLOWER 2 (EMF2) [Arabidopsis Thaliana] (GB:Q8L6Y4;GB:Q93V59;GB:Q9LU50;GB:Q9LU51); similar to VRN2 (REDUCED VERNALIZATION RESPONSE 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G16845.1); similar to embryonic flower 2 [Yucca filamentosa] (GB:ABD85300.1); similar to polycomb group protein EMF2 [Asparagus officinalis] (GB:ABD85301.1); similar to embryonic flower 2 [Silene latifolia] (GB:BAD93353.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.0998890336419992 -1.06379659133995 0.311096059421805 1 0.590062002116685 8.43424734376468 -0.0998890336419992 0.0816767908846883 AT5G25150_at 6.16994240556457 5.82244872200248 6.8576049122666 6.7815444607773 7.99763435628327 7.39424727128264 6.06795952982169 5.71030587918164 5.93322772328808 5.22419679146501 6.50876608502128 7.03329897658708 6.62996919156262 7.04993755272974 6.15636924402927 7.05357974916785 6.70060325210605 6.59357090089295 5.92346541198536 0.24119480532673 0.258624246986190 0.234810600674190 0.246890320558244 0.248628521924027 0.239341568519197 0.23705721277535 0.232627905487647 0.262529779865628 0.247313274247718 0.237910195608426 0.235785248548802 0.232182879450551 0.245309080411481 0.236599769371411 0.232182879450551 0.246020519246012 0.244942494281927 0.232399728751057 5 5 + 8680847 8681679 8681197 8677094 8682208 + gene protein_coding_gene TRUE TRUE AT5G25150.1 nucleotide binding similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to hypothetical protein MtrDRAFT_AC133571g9v1 [Medicago truncatula] (GB:ABE79248.1); similar to Os06g0649500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058217.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain WD40 associated region in TFIID subunit; (InterPro:IPR007582) 0.122639708689499 1.06351279248055 0.311218871352347 1 0.589786573572044 12.8049068644433 0.122639708689499 0.136101652290833 AT5G62890_at 8.14748163536203 8.50966476395636 8.05513814310219 8.0049292632044 8.52136829782746 8.45299675969882 8.08921026764327 7.74485195050548 8.68444007483264 7.62711066470719 9.48513428669667 9.89662551205808 8.87174094818417 9.25997306806344 9.97922546075577 9.50490838189102 8.3066379950233 9.62118221784489 7.70799706124222 0.218570541159989 0.215273533911572 0.219286428546431 0.236262337763718 0.212699077515608 0.224510578577313 0.216067841109635 0.213412691208469 0.218224585710458 0.233368099084097 0.211026794256183 0.216838947612368 0.213784676895323 0.210326490587063 0.209185441641332 0.208352339945063 0.225611094425801 0.208712020206436 0.218217498122538 5 5|0 +|/ 25263504 25264276 25263904.9 25260477 25264603 + gene protein_coding_gene TRUE TRUE AT5G62890.1|AT5G62890.2|AT5G62890.3|AT5G62890.4 permease, putative|permease Identical to Nucleobase-ascorbate transporter 6 (AtNAT6) (NAT6) [Arabidopsis Thaliana] (GB:Q27GI3;GB:Q3E869;GB:Q94CA7;GB:Q9FM07); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT5G49990.1); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G60030.1); similar to xanthine/uracil permease family protein [Arabidopsis thaliana] (TAIR:AT1G10540.1); similar to Xanthine/uracil/vitamin C permease; Thioredoxin-related [Medicago truncatula] (GB:ABE83225.1); similar to root uracil permease 1 [Oryza sativa (japonica cultivar-group)] (GB:CAJ84113.1); similar to putative permease I [Lycopersicon esculentum] (GB:AAX73299.1); contains InterPro domain Xanthine/uracil/vitamin C permease; (InterPro:IPR006043) -0.102020948775861 -1.06340339308431 0.311266222949154 1 0.589680416323867 16.8768023438668 -0.102020948775861 0.0877226480218503 AT5G56490_at 0.641501441606735 0.624912099618936 0.681252836852519 0.849473307667934 0.758781347953644 0.96212307743114 0.632705638289914 0.956842252989721 0.771351285384526 1.11309732086014 0.84187219380895 0.800034200125562 0.505105128999373 0.799890821257952 0.628856622365851 0.461824369499444 0.6220562792539 0.605011970031178 0.638317913916717 0.221813875199056 0.221230638990668 0.217564962140645 0.219422592676316 0.225714117796269 0.223455498042611 0.222103901765821 0.217564962140645 0.227177413176281 0.223645316771003 0.224145953416218 0.221851071877556 0.2290608632822 0.218519801542966 0.217992186826880 0.217564962140645 0.217564962140645 0.218762946408020 0.221032870764016 5 5 + 22890078 22890621 22890275.909 22888689 22890670 + gene protein_coding_gene TRUE TRUE AT5G56490.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46750.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G32300.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46760.1); similar to Os08g0114300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060850.1); similar to Putative FAD binding domain containing protein, identical [Solanum tuberosum] (GB:AAV31183.1); similar to Os03g0563100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050492.1); contains InterPro domain Plant-specific FAD-dependent oxidoreductase; (InterPro:IPR010030); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094) -0.0966625676669722 -1.06253976322626 0.311640221140595 1 0.588842684588505 1.51295081107877 -0.0966625676669722 0.072391009591509 AT5G49650_at 9.13711499237865 9.10963788529588 9.63282709805578 9.65057297890847 9.62908660087056 9.63060343094423 8.7141802977601 8.78306349510783 8.79836345530716 9.13777027815018 9.68593228586322 9.46827504582762 9.49781364951047 9.58694540114908 9.5971357571627 9.42963188633115 9.41667836466278 9.71279319043058 8.86831468472343 0.111807905179826 0.111906432608293 0.108726743786801 0.110420433094091 0.117977734264831 0.110999275169634 0.114913343902633 0.117628969255452 0.129684643116418 0.119610201930995 0.108629379607291 0.112605880201058 0.110000297089614 0.113446789498979 0.109765084307012 0.112787180449430 0.115729445285562 0.107679652040006 0.121256972151726 5 5|0 +|/ 20171985 20172716 20172399.556 20170007 20172994 + gene protein_coding_gene TRUE TRUE AT5G49650.1|AT5G49650.2 xylulose kinase, putative similar to Carbohydrate kinase, FGGY [Medicago truncatula] (GB:ABE93144.1); similar to Os12g0633000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067349.1); similar to Os07g0640200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060421.1); contains InterPro domain Carbohydrate kinase, FGGY; (InterPro:IPR000577)|similar to Carbohydrate kinase, FGGY [Medicago truncatula] (GB:ABE93144.1); contains InterPro domain Carbohydrate kinase, FGGY; (InterPro:IPR000577) -0.0846827386051365 -1.06178597118658 0.311966931179919 1 0.588111937672971 18.5279942659206 -0.0846827386051365 0.0131988683758471 AT5G24710_at 4.33779006670904 4.53339519474087 5.37273927035222 5.08091101102855 5.60134441846098 5.67952524601172 4.98348744863435 4.66595426151897 4.04145615750385 3.48932787435905 4.87330947711106 5.15172299777309 5.00321419842486 4.60310398413733 4.81040756902129 5.06465972030376 4.85671520356704 4.69766906979141 3.6665264960202 0.201665464819899 0.199919809376909 0.208311828360916 0.203848052830727 0.204469181753452 0.215634552385293 0.200343945341350 0.197083251767325 0.205294360134839 0.203427018590819 0.201065675604682 0.202451072197248 0.198076686086195 0.204101883235189 0.208256475238546 0.198694846880167 0.197201170874793 0.202956243683870 0.19756810902513 5 5|0 -|/ 8459261 8467351 8462423.444 8458850 8468176 - gene protein_coding_gene TRUE TRUE AT5G24710.1 similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G38560.1); similar to Os01g0653800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043744.1); similar to WD-40 repeat family protein [Medicago sativa] (GB:AAZ31064.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; WD40-like [Medicago truncatula] (GB:ABD32844.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.100155507436335 1.06146227878308 0.312107305990752 1 0.587798267418312 9.33941192475405 0.100155507436335 0.0830598688499849 AT5G67000_at 1.87199903863470 1.52754465690661 2.24453506517379 1.91701315924454 2.07727780200804 2.20755144487855 1.93489575274563 2.06535629067705 2.59714125295052 1.95281408260882 2.22674860059296 1.94166307841908 2.34779107173332 2.13886985124402 2.18281736521741 1.92737056543911 2.01054497908012 2.45948260411688 2.20059482266677 0.231851310652444 0.234279330312702 0.233274218626243 0.233475622246669 0.230966964577668 0.228603872938339 0.231379759452196 0.230576197826847 0.230888851026221 0.232487974496357 0.234140797073453 0.231228299905086 0.237864481991879 0.239491790539751 0.232787108311777 0.239276296099021 0.23725830085403 0.243969089717974 0.231932031363555 5 5 - 26763947 26764267 26764116.636 26763903 26764507 - gene protein_coding_gene TRUE TRUE AT5G67000.1 DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G20350.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80530.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.101971360491462 -1.06095960325284 0.312325394521619 1 0.587311305991439 4.18306885156148 -0.101971360491462 0.0882257377871029 AT5G43440_at 9.12256826373709 9.38327600407504 9.65091516920086 9.67608657418314 10.4825632112432 9.70631412176502 9.27937138610298 9.04162799960054 8.61829549539067 8.96379103212562 9.51108165137287 9.2857028579989 9.50561909935874 9.7018287537002 9.21289198647019 9.46253843339141 9.0439001246857 9.24172588060956 8.90072042025976 0.137824741292855 0.130238619845095 0.130545242101276 0.135076146155808 0.142550202229588 0.137826045898413 0.133935577292624 0.130227532066115 0.162653663863934 0.127766697951898 0.133512630219147 0.143958052570739 0.133165192971944 0.137524671702037 0.149082601817779 0.127109077310104 0.144437234333800 0.135499230730035 0.127109077310104 5 5 - 17472589 17473102 17472836.818 17472461 17473885 - gene protein_coding_gene TRUE TRUE AT5G43440.1|AT5G43440.2 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT5G43450.1); similar to unknown [Prunus armeniaca] (GB:AAD38147.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.127891933314755 -1.06085847515968 0.312369283404212 1 0.587213361352361 18.6419720484254 -0.127891933314755 0.147623509031291 AT5G41170_at 3.01195584491443 2.89017197325746 3.60130370654408 3.56606408838634 3.17254294922841 3.51635087086787 2.77259833387042 3.15703324100973 3.10294104439068 3.14356546000127 3.32028657981356 3.47242510060173 3.36879929486031 3.08583273882316 2.96396380798468 3.4051482107493 3.34813292130251 3.58079564461313 2.87838381123717 0.185372302187186 0.181916731302256 0.183568964762044 0.184397226529509 0.190498775219398 0.18406257685753 0.190501706866242 0.180440804812615 0.195928231641655 0.179478332756588 0.182819879990437 0.182463317944622 0.180907760047362 0.189519027065542 0.179478332756588 0.179478332756588 0.189795322755703 0.18120393970485 0.186030521091762 5 5 - 16496203 16496635 16496463.455 16495714 16497812 - gene protein_coding_gene TRUE TRUE AT5G41170.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G16710.1); similar to fertility restorer homologue C [Raphanus sativus] (GB:CAD80164.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.103297770433925 -1.06045825513396 0.312543021785034 1 0.586825812646316 6.39090419728647 -0.103297770433925 0.0919093347021244 AT5G07400_at 1.98457308150998 2.06734313588426 2.2406434453777 2.36058158256401 2.15899501513531 1.96936826914409 1.93686130139278 1.79119704010447 2.37980713635002 2.64039242701784 2.09115958871022 2.40912750228655 2.59435736223006 2.23005287653089 2.68468425635247 2.63839851933897 2.62341444848428 2.68840015868713 2.3767823801291 0.211464232022269 0.205022949266374 0.207218520053914 0.205022949266374 0.212402021669532 0.207955726083584 0.216070727605112 0.210480902991599 0.210371296524012 0.211869420843883 0.210619067867543 0.213133980432482 0.205022949266374 0.206279785779817 0.206885636026741 0.205022949266374 0.213927212303908 0.205757983274782 0.211508128014673 5 5 + 2344621 2345282 2344929.273 2340643 2345453 + gene protein_coding_gene TRUE TRUE AT5G07400.1 forkhead-associated domain-containing protein / FHA domain-containing protein similar to tyrosyl-DNA phosphodiesterase-related [Arabidopsis thaliana] (TAIR:AT5G15170.1); similar to OSJNBb0118P14.6 [Oryza sativa (japonica cultivar-group)] (GB:CAD40679.2); similar to Os04g0403400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052698.1); similar to Forkhead-associated; Tyrosyl-DNA phosphodiesterase [Medicago truncatula] (GB:ABE85647.1); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984) -0.0897897191465559 -1.05945180901391 0.312980249743863 1 0.585851744081872 4.54400035234402 -0.0897897191465559 0.0484591433458495 AT5G55370_at -0.0364287504616759 0.468264017284589 0.292397535420924 0.423393230990227 0.364487507160697 0.54092524837819 0.438234314146489 0.124461434966323 0.546149792430477 0.918774204744314 0.211861602008478 0.051188950783556 0.597823062242204 0.218448715061936 0.234051347671563 0.498899450087471 0.662269542756736 0.333640320711140 0.434590197969938 0.194500893768112 0.195012892478801 0.18284764658372 0.185801853499343 0.187896713893181 0.192960700380485 0.186039321957890 0.187011660205417 0.182434655368466 0.189925340161322 0.186363853965679 0.187419432452951 0.186405667654273 0.185519386226378 0.184977412682531 0.182434655368466 0.185453618716744 0.192651957501229 0.192132395598711 5 5 - 22462535 22462857 22462700.455 22462311 22463342 - gene protein_coding_gene TRUE TRUE AT5G55370.1 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55380.1); similar to wax synthase isoform 1 [Vitis vinifera] (GB:AAO18664.1); similar to wax synthase isoform 2 [Vitis vinifera] (GB:AAO18665.1) -0.110073031397436 -1.05721586017286 0.313953259597067 1 0.583690353053993 0.819063953384201 -0.110073031397436 0.109648718459201 AT5G51090_at 0.374861821915481 0.420224206895766 -0.0580706892932496 0.251947814973730 0.620503019233656 0.535023213251021 0.294068818690008 0.0283109161930393 0.557394651263133 0.0438273934048983 -0.210812369895886 -0.134101321078532 0.171155634333446 0.277644068286835 0.363224504178899 0.151404575954016 0.177004424042995 0.447407471576569 0.331690852463784 0.212240767241288 0.211465942026738 0.212487968861283 0.204634231720505 0.204304029968362 0.214911572585328 0.204295401166761 0.209212656469592 0.203639882483367 0.215165219045041 0.207990502901954 0.208061068589065 0.211752163347483 0.208274952619796 0.211809479367675 0.205169977808050 0.203639882483367 0.208106088396222 0.203639882483367 5 5|0 -|/ 20789537 20790360 20789922 20789463 20790420 - gene protein_coding_gene TRUE TRUE AT5G51090.1 unknown protein -0.096184913729275 -1.05648201576258 0.314273100833886 1 0.582981769069994 0.54152705980013 -0.096184913729275 0.0726218033520649 AT5G02490_at 7.72691759691906 8.17539831152688 9.31290366377617 9.69042789765672 7.62990676075841 7.29627225324439 5.25537400810734 5.37188700429776 5.84439357886075 6.23653180135416 6.03746124030164 6.00374028290462 5.56038042110733 6.021445351986 5.81029592182626 6.4645671793464 5.55409424013228 6.03775687555573 5.70429233818084 0.32098776795482 0.337769272844053 0.352693792210705 0.365337719949116 0.324441934555603 0.335756342732801 0.326424407261940 0.321956630386757 0.326456458891670 0.320507919608412 0.320507919608412 0.320507919608412 0.320507919608412 0.326824138978987 0.328296622993980 0.320507919608412 0.323878447190422 0.320507919608412 0.321281418383843 5 5 - 550302 550860 550522.909 550033 552643 - gene protein_coding_gene TRUE TRUE AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) Identical to Heat shock cognate 70 kDa protein 2 (Hsc70.2) (HSC70-2) [Arabidopsis Thaliana] (GB:P22954;GB:Q9LZ53); similar to HSP70 (heat shock protein 70), ATP binding [Arabidopsis thaliana] (TAIR:AT3G12580.1); similar to heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) [Arabidopsis thaliana] (TAIR:AT3G09440.1); similar to HSC70-1 (heat shock cognate 70 kDa protein 1), ATP binding [Arabidopsis thaliana] (TAIR:AT5G02500.1); similar to heat shock protein 70-3 [Nicotiana tabacum] (GB:AAR17080.1); similar to heat shock protein 70 [Oryza sativa (indica cultivar-group)] (GB:CAA47948.2); similar to heat shock cognate protein HSC70 [Brassica napus] (GB:AAB88009.1); contains InterPro domain Heat shock protein Hsp70; (InterPro:IPR001023); contains InterPro domain Heat shock protein 70; (InterPro:IPR013126) -0.113756158079852 -1.05621420528193 0.314389885429781 1 0.582723274524245 13.4896977346743 -0.113756158079852 0.118456740482217 AT5G36960_at 1.75093808778166 1.60032797946050 1.50825876300207 1.5908172996614 1.40844932947487 1.68190799051792 1.13207899225065 1.42155451080648 1.84450701650434 2.04780035229875 1.83383799876306 1.67671070883423 1.67201954519056 2.01464620721958 1.82717077600868 1.87050791948637 1.90247155729743 1.78291924798115 1.63141967328144 0.205926800511909 0.202050108605543 0.202050108605543 0.204165367197343 0.210402347893478 0.211224033874581 0.202616754794472 0.204309223133513 0.202050108605543 0.202050108605543 0.202564662006117 0.203373792026740 0.204070379257549 0.204653620669178 0.202050108605543 0.20294268266596 0.210193525315598 0.213428477494666 0.205388788568388 5 5|0 +|/ 14615977 14616934 14616297.6 14615975 14616959 + gene protein_coding_gene TRUE TRUE AT5G36960.1 unknown protein -0.096938169398212 -1.05615550347422 0.314415488003089 1 0.582666621648496 3.34368054034901 -0.096938169398212 0.0750496860807473 AT5G57330_at 9.54611843928216 9.5675055676757 10.0914636110933 10.1278608286326 10.0352351148051 9.74313983075597 9.86402906175445 9.78938788886414 8.59200726024454 9.21858848315317 9.85262129511255 10.0846665661049 9.8039758377931 9.73549111394349 9.9766480017426 9.65862855270784 9.93395013577105 9.94401494017088 9.06209732651773 0.101999011235648 0.0983252433708506 0.107414468547745 0.104337881947974 0.102806493076492 0.103458487166790 0.101009021947795 0.0991666002479414 0.127691976639502 0.104385893902080 0.102229066908184 0.099378913525852 0.102662410973504 0.101585664037069 0.103821731657937 0.101382516823449 0.104204621226296 0.106285780492215 0.105795870981343 5 5|0 +|/ 23237105 23237848 23237487.111 23235440 23238315 + gene protein_coding_gene TRUE TRUE AT5G57330.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT3G61610.1); similar to Os04g0658000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054126.1); similar to OSIGBa0132E09-OSIGBa0108L24.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67787.1); similar to Galactose mutarotase-like [Medicago truncatula] (GB:ABE86317.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) -0.0904682954046181 -1.05565992000951 0.314631697520150 1 0.58218843579104 19.2612494988863 -0.0904682954046181 0.0526817526802212 AT5G05980_at 7.13345239917354 7.08738149863709 8.18094336693886 7.97491608243173 8.38883225857057 8.1516665286002 7.17036967254893 7.02292303793848 6.96217651973138 7.18534656117226 8.02183337087665 8.10323804128648 7.83244386039814 7.59048495626 7.8158772466544 8.15528090380872 7.6274357136133 7.74483356657186 7.37071474738293 0.180732046866445 0.180093319667161 0.180706710332209 0.178999467529918 0.189425175228428 0.197648481885151 0.180100991428331 0.188732814144495 0.1820831727194 0.180723461922375 0.183250885521262 0.180157431050397 0.18205866649192 0.187940480552459 0.183053388223423 0.174497178833574 0.194631171521878 0.175536148045523 0.181743285346786 5 5 - 1799681 1800713 1800075 1799491 1804493 - gene protein_coding_gene TRUE TRUE AT5G05980.1|AT5G05980.2 ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B); tetrahydrofolylpolyglutamate synthase similar to ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT3G55630.3); similar to putative folylpolyglutamate synthetase [Oryza sativa (japonica cultivar-group)] (GB:AAG13624.1); similar to Os03g0111100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048721.1); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645); contains InterPro domain Mur ligase, middle region; (InterPro:IPR013221) -0.0925091767463813 -1.05543681614570 0.314729068207064 1 0.581973222277437 15.1558978057029 -0.0925091767463813 0.0605834356816105 AT5G45410_at 9.90124077453842 10.1059189065452 11.0171513057418 11.0121080429516 10.1859635997678 9.96210083916556 10.1735480320600 10.1730879012482 8.58747770319741 9.07381185607531 9.98779266252776 9.72615116385177 9.40640467251626 9.66482413815124 9.77509021563444 9.78003802563843 10.1390320783027 9.9774929883172 8.46755019023315 0.092143851210074 0.0913045433774451 0.0953410177652035 0.0963851792423437 0.0911669569416248 0.0934085288888466 0.0895723357304795 0.0925425664994028 0.112065560438784 0.0999833364509884 0.0904249868814518 0.0925234801797068 0.090747568920458 0.0891778920454625 0.0969855491043624 0.090439767575345 0.0981779426155483 0.0963847672763325 0.107332244304465 5 5 - 18419383 18419855 18419634.091 18419135 18421027 - gene protein_coding_gene TRUE TRUE AT5G45410.1|AT5G45410.2|AT5G45410.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25030.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67910.1) 0.090261309849169 1.05376443214698 0.315459680921309 1 0.580361135891334 19.5747481717287 0.090261309849169 0.0524995827005015 AT5G52460_at 0.957514493170886 1.21208293525296 1.19419119881893 0.959901070178364 1.51155764361028 1.86049283172690 1.3042142442848 1.34241647822666 1.98802507511057 2.09653449878215 1.64166116228651 1.33215105081612 1.75545509958350 1.62351841735130 1.89613032528751 1.46828892009434 2.04034021750966 1.56936182711406 1.40559015779892 0.210218766170215 0.203704933919640 0.213341982860573 0.219188485619548 0.208288239057398 0.210801381669226 0.209257047695404 0.203704933919640 0.207303325702036 0.205403977171142 0.211208416063665 0.223189058264228 0.204448162247975 0.204869296193769 0.210366311817785 0.203704933919640 0.212195541999957 0.215897399321811 0.219072352307653 5 5|0 -|/ 21309612 21310476 21310150.222 21309601 21310984 - gene protein_coding_gene TRUE TRUE AT5G52460.1 EDA41 (embryo sac development arrest 41) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G05080.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE92026.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.100211585099284 -1.05368363088431 0.315495012810114 1 0.580283299394757 3.04075300594335 -0.100211585099284 0.0852919239696432 AT5G59380_at 5.56202048778618 5.23585542715943 5.8731448856198 5.96095990711013 6.64263369345388 6.46780541101969 5.00663306849785 5.5723769551616 4.53682554032006 4.57108119489279 5.37546713491802 5.46049381413823 5.8822942210067 6.21737272137334 5.41009451311039 5.39819418948343 5.32771288527308 5.64087876746236 5.12493196425198 0.204678979194170 0.204074922696519 0.207884695985581 0.198644882297411 0.200970082685513 0.197372307122838 0.202555547133013 0.199321997736354 0.225925373277234 0.211168309095041 0.203907050886771 0.199641960428051 0.207884703787136 0.201754082114754 0.199076272907926 0.199832275583126 0.208471452317091 0.207544085494682 0.205343923070162 5 5 + 23969701 23970669 23970233 23969487 23970933 + gene protein_coding_gene TRUE TRUE AT5G59380.1 MBD6 (methyl-CpG-binding domain 6); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to MBD5 (methyl-CpG-binding domain 5), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46580.1); similar to PREDICTED: similar to methyl-CpG binding protein MBD2 [Pan troglodytes] (GB:XP_512139.2); similar to methyl-CpG binding domain protein 2 isoform 1 [Homo sapiens] (GB:NP_003918.1); similar to methyl-CpG binding domain protein 2 testis-specific isoform [Homo sapiens] (GB:NP_056647.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) -0.113221769153960 -1.05321799516820 0.315698678950211 1 0.579834841339437 10.9568502781431 -0.113221769153960 0.117972799673393 AT5G57540_at 1.94843374840929 1.51056105766852 1.70523903409178 2.04175907615556 1.26445262397654 1.96326443765526 1.08124257533622 1.78983357534679 1.90060685525636 1.87128979371170 1.29583332280935 1.65763800943925 1.74738742633738 1.43103724147392 1.55959453939347 1.82508234696338 1.62676724393422 1.63815318341225 1.67014020418592 0.205969826657862 0.205980994572015 0.206481122599963 0.214080394584989 0.210225328664818 0.21517374451922 0.213841128424015 0.209234803200558 0.206600161539514 0.207199532195861 0.207719761598717 0.205969826657862 0.205969826657862 0.224355738341400 0.207479547834162 0.209432448669133 0.217535300426788 0.213626932196248 0.21156725036066 5 0|5 /|- 23320222 23320843 23320451.7 23320222 23321275 - gene protein_coding_gene TRUE TRUE AT5G57540.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative Identical to Putative xyloglucan endotransglucosylase/hydrolase protein 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) (XTH13) [Arabidopsis Thaliana] (GB:Q9FKL8); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G57530.1); similar to putative xyloglucan endotransglycosylase [Cucumis sativus] (GB:CAD87535.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) -0.152252606576306 -1.05161651806933 0.31639991062791 1 0.578293648255596 3.36894774038253 -0.152252606576306 0.196964595781997 AT5G10130_at 1.76604301284633 2.01117616081256 1.89224967382162 2.09176384037711 1.35721292025825 1.95858546013226 1.57189951721687 1.61176803030881 1.67208469198798 2.13566649821433 2.07964779490320 1.55237579937376 2.10289800303084 1.93071299245847 2.11113722622975 2.10310828240356 2.24986347901938 2.24063953685168 2.32831403374132 0.220653327418562 0.217880800594628 0.218310863799394 0.22790205972023 0.217880800594628 0.225918907238788 0.223787188172544 0.220915535527571 0.218693346395887 0.220821508586195 0.231764475933324 0.217880800594628 0.227462334558239 0.224552958619136 0.219678032354260 0.217880800594628 0.225082325815496 0.225382617067420 0.225299020055891 5 5|0 -|/ 3171564 3172400 3171957.8 3171300 3172529 - gene protein_coding_gene TRUE TRUE AT5G10130.1 pollen Ole e 1 allergen and extensin family protein similar to SAH7 [Arabidopsis thaliana] (TAIR:AT4G08685.1); similar to 4D11_14 [Brassica rapa subsp. pekinensis] (GB:AAZ67528.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) -0.112862991870956 -1.05070003219269 0.316801735132617 1 0.577412501468809 3.82841380893758 -0.112862991870956 0.117770608365515 AT5G05520_at 5.58835352367575 5.49554148900263 6.50311948413697 6.1653491708278 6.55973998104415 6.44098584913973 4.7359511422803 5.45141329602676 5.03275490264597 4.71224102498183 5.8675656454764 6.2588795489467 5.74774263252554 5.63556241854241 5.65619967246026 5.83092257484619 5.56086752868302 5.90044216683692 4.30599856997011 0.215683562484865 0.20746130331755 0.232614986000102 0.215649043104904 0.210719595094953 0.219316865736034 0.223605823179915 0.212035166391739 0.215878120409493 0.222531577100773 0.219593388335310 0.212117655578415 0.212755245323207 0.220139813277836 0.220183863954023 0.215509621020479 0.231387244786401 0.216551853770164 0.216596162662198 5 0|5 /|+ 1634432 1635021 1634686 1632846 1635343 + gene protein_coding_gene TRUE TRUE AT5G05520.1 outer membrane OMP85 family protein similar to outer membrane OMP85 family protein [Arabidopsis thaliana] (TAIR:AT3G11070.1); similar to Os12g0105700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065934.1); similar to outer membrane protein, OMP85 family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91076.1); similar to Os05g0470800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055810.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) 0.122467242652732 1.04863806390970 0.317707188311257 1 0.575432279098845 11.1130255450529 0.122467242652732 0.139380625817343 AT5G58240_at 6.84575562875358 7.01937354490221 7.33758792042422 7.4320542198079 7.89028669345798 7.39391205587688 6.16300621294628 6.32045245835767 5.73981270500444 5.63334388979532 7.22410488231953 7.3019900902074 7.1727522873753 7.15973474129376 7.34411489267929 7.29365923567206 6.8513389111231 6.49196111257378 5.84036250706461 0.204622216036898 0.205557065457913 0.203699905313528 0.205041572307197 0.205978399488482 0.232141272735802 0.206064464006326 0.212041520287243 0.240092068725389 0.224279188939866 0.211890557468577 0.210063188451938 0.220409004462692 0.210709591191993 0.210650612124662 0.20698574549238 0.230606965581311 0.231643008886638 0.219542105281205 5 5|0 -|/ 23575586 23576364 23576029.7 23575340 23576579 - gene protein_coding_gene TRUE TRUE AT5G58240.1|AT5G58240.2 bis(5'-adenosyl)-triphosphatase, putative similar to ATPase-like protein [Sorghum bicolor] (GB:AAO16703.1); contains InterPro domain Histidine triad (HIT) protein; (InterPro:IPR001310) 0.103817390035214 1.04831589013702 0.317848837019739 1 0.575123157849963 13.4717019517043 0.103817390035214 0.0963906964206783 AT5G39440_at 1.09518051743933 0.978559835210114 1.47826616903239 1.76770459658504 1.09934439073014 1.50448245805785 0.984196859429162 1.47096805280149 1.64581102140936 1.05112600917401 1.14594310106872 1.22061954400656 1.67524311949850 1.64156748073978 0.961210100100118 1.51595745810341 1.47874401073398 1.01267449761549 1.08601842620712 0.184835546517979 0.187874182507776 0.187990463748050 0.187527914232205 0.190326202629870 0.187840689901678 0.185465059911907 0.186693126582530 0.190908961320223 0.187875705982006 0.203035086684980 0.192545813993880 0.184835546517979 0.186540243451951 0.193137949849807 0.190278131844353 0.188499333527952 0.193163529326229 0.189303049294706 5 5|0 +|/ 15800863 15801900 15801502.333 15799135 15801927 + gene protein_coding_gene TRUE TRUE AT5G39440.1 SnRK1.3 (SNF1-RELATED PROTEIN KINASE 1.3); kinase similar to AKIN10 (Arabidopsis SNF1 kinase homolog 10, SNF1-RELATED PROTEIN KINASE 1.1), protein kinase [Arabidopsis thaliana] (TAIR:AT3G01090.2); similar to AKIN11 (Arabidopsis SNF1 kinase homolog 11, SNF1-RELATED PROTEIN KINASE 1.2), protein kinase [Arabidopsis thaliana] (TAIR:AT3G29160.2); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95888.1); similar to SNF1 [Lycopersicon esculentum] (GB:AAF66639.1); similar to SNF1-related protein kinase [Cucumis sativus] (GB:CAA71142.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Kinase-associated, C-terminal; (InterPro:IPR001772); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.114422812180028 1.04722756472609 0.31832768705948 1 0.574079484916146 2.5935778930341 0.114422812180028 0.122179293249264 AT5G57840_at 2.4552206887133 2.22758640865514 3.04143610695223 2.90435524371882 3.05643441002598 2.99677926853285 2.56880660407646 2.42333414834553 2.27306663518393 2.71333398425402 2.70908830309689 2.46234330994684 2.2206776856296 3.19101217724293 2.24719095620193 2.87940817226416 2.88699265064823 3.00923715249948 2.40974985152965 0.20324334989758 0.199762894176593 0.207845836410660 0.212492476230620 0.198667922542065 0.218044612109174 0.205055022388505 0.193122214651668 0.199787323576140 0.205856923955028 0.197787934629307 0.203624167147968 0.202376586598569 0.200404462776477 0.203011379328264 0.197983819505103 0.200170590547894 0.203422512156232 0.204488696953334 5 5 - 23450176 23450869 23450511.182 23450030 23452458 - gene protein_coding_gene TRUE TRUE AT5G57840.1 transferase family protein encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G48930.1); similar to N-hydroxycinnamoyl/benzoyltransferase [Ipomoea batatas] (GB:BAA87043.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.0898863230530713 1.04672801126783 0.318547665876613 1 0.573600717004079 5.29230775550943 0.0898863230530713 0.0534314506264442 AT5G45980_at 0.763751298713914 0.618301284088672 1.03344015448697 0.882049272482326 0.916192271940911 1.17707319695001 0.726365626920713 0.747211658054274 1.37013228444863 1.31857658281244 1.17842822096963 0.76226078700788 1.18973388473051 0.715387577096026 0.672808665221664 0.865089119067447 1.20659751935963 0.679380032811475 1.06330705157496 0.189953714143080 0.178923643111897 0.179959868904408 0.180430158114166 0.180859644592644 0.186204734615848 0.182395470579422 0.182898172127424 0.185071634109476 0.191479066512413 0.180522589105714 0.186815302614321 0.185002904832337 0.185025264857532 0.178961171851698 0.180380106391972 0.191203260932043 0.1957883148367 0.184288162359595 5 5 + 18666496 18666996 18666751.545 18666136 18668063 + gene protein_coding_gene TRUE TRUE AT5G45980.1 WOX8 (WUSCHEL-related homeobox 8); DNA binding / transcription factor Arabidopsis thaliana WOX8 protein. Contains similarity to homeodomain transcription factor. Identical to WUSCHEL-related homeobox 8 (WOX8) [Arabidopsis Thaliana] (GB:Q6X7J5;GB:Q9FNM4); similar to WOX9 (STIMPY), transcription factor [Arabidopsis thaliana] (TAIR:AT2G33880.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT77402.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.0910647499326452 -1.04669024344025 0.318564301613263 1 0.573564528040311 1.93773944481891 -0.0910647499326452 0.0580619209582026 AT5G21040_at 8.11680613357906 7.9931338889988 8.84796198035335 8.87861479953066 9.04107047629365 8.92389000198552 8.11340592661173 8.11607406814525 8.19976463852034 8.0696307649664 8.98994261458187 8.97528396079968 8.90966604898954 8.96029858861455 8.68157577853039 9.09578003012464 8.69519075293406 8.77305774441047 8.38307432403335 0.130845333023311 0.128261998339836 0.133496582958834 0.126951352993003 0.128556407259405 0.135086178249364 0.124306061124830 0.128871398879217 0.136364099703613 0.131701234188496 0.122965573239664 0.122865344975896 0.125205652975210 0.122865344975896 0.128345838290539 0.124519402697535 0.133678563951012 0.123338490331310 0.124913948886273 5 5 - 7145124 7145616 7145385.818 7144924 7147131 - gene protein_coding_gene TRUE TRUE AT5G21040.1 F-box family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G43770.1); similar to WD-repeat protein [Nostoc sp. PCC 7120] (GB:NP_490235.1); similar to Os04g0619700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053901.1); similar to WD-40 repeat protein [Chlorobium phaeobacteroides DSM 266] (GB:YP_911315.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.0852090762550575 -1.04613325061015 0.318809718079850 1 0.573030940997384 17.0551643339605 -0.0852090762550575 0.0299603567202778 AT5G20810_at 2.66169454937317 2.35469611026019 3.23032838748197 2.84272687541019 2.97610899454718 3.03260036908632 2.64802843488388 2.49441552549483 2.51911428470146 2.71890997846204 2.97011377023279 2.79024247873424 3.01310596474818 2.70605502552080 3.11795039613059 3.10688571591521 3.41256110210814 2.99548860178948 2.46677690697425 0.224933547026175 0.238062219322376 0.246094083358503 0.237155572142488 0.226508544440919 0.242391420934945 0.224933547026175 0.233393374458609 0.228773719409210 0.229447307935175 0.229286775935606 0.226089404948429 0.229711896356487 0.229901530340935 0.224933547026175 0.224933547026175 0.229046824483645 0.233058576373466 0.236107711411820 5 5 + 7044881 7045319 7045100.182 7043900 7045714 + gene protein_coding_gene TRUE TRUE AT5G20810.1|AT5G20810.2 auxin-responsive protein, putative / small auxin up RNA (SAUR_B)|calmodulin binding similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G43120.1); similar to auxin-regulated protein [Phaseolus vulgaris] (GB:AAN65371.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.101183871475173 1.04551276147164 0.319083278709752 1 0.572436792796807 5.57123362512222 0.101183871475173 0.0901332710277177 AT5G03860_at 1.28485122597365 1.07131520651027 1.73678716607028 1.81399956391548 1.38161699949966 1.68553347731129 1.51267737171787 1.35083248343912 1.38993241635297 1.74430915914847 1.58332885178846 1.21586000758520 1.61688424248592 1.81877531607607 1.23854227488366 1.51020427343791 1.69056612126895 1.79867827501373 1.39025072973126 0.181100140067330 0.171345473120847 0.178586525711706 0.177333373656965 0.176473680664771 0.178828484813187 0.171345473120847 0.180062921747326 0.192540701594131 0.184065618956534 0.178987367814459 0.183433203866895 0.178063796424406 0.176746358750348 0.176914284503321 0.186028448325534 0.184220813725304 0.18083379944071 0.191130184119502 5 5 - 1032282 1032787 1032589.273 1032102 1034569 - gene protein_coding_gene TRUE TRUE AT5G03860.1 malate synthase, putative Encodes a protein with malate synthase activity. similar to glyoxysomal malate synthase [Brassica napus] (GB:CAA73793.1); similar to Malate synthase, glyoxysomal (GB:P08216); similar to Malate synthase, glyoxysomal (GB:P13244); contains InterPro domain Malate synthase; (InterPro:IPR001465); contains InterPro domain Malate synthase A; (InterPro:IPR006252); contains InterPro domain Malate synthase-like; (InterPro:IPR011076) 0.0947636711957094 1.04515195988872 0.319242429522755 1 0.572091437317289 3.01333619783556 0.0947636711957094 0.0713771045072766 AT5G40890_at 10.2141657856123 10.3647131827527 11.0411609545966 11.1091459619400 11.3681652201529 10.8758103290050 10.7055502793382 10.6613252666920 10.7415653750595 10.8516625094543 11.2880576029052 10.9383468548879 11.2897043638843 11.2323030792441 10.9068399990451 10.9555313203336 11.0908929977836 11.0316202578036 10.5714205122368 0.0820388711437264 0.0798757795227462 0.086371512358835 0.0842628574712828 0.0793630297313328 0.0896312773908669 0.0795719621320198 0.0793630297313328 0.0990984775425033 0.0836040121403407 0.0793630297313328 0.0796949682144549 0.0793630297313328 0.0849015112409422 0.0808928257603992 0.0793630297313328 0.0869741022635975 0.0816514935537438 0.0845599454118321 5 5 - 16398905 16399467 16399206.091 16398542 16402547 - gene protein_coding_gene TRUE TRUE AT5G40890.1|AT5G40890.2 ATCLC-A (CHLORIDE CHANNEL A); anion channel/ voltage-gated chloride channel|ATCLC-A (CHLORIDE CHANNEL A); voltage-gated chloride channel Encodes a member of the voltage-dependent chloride channel. Mutants homozygous for the T-DNA insertion mutation have reduced nitrate uptake capacity in high nitrate environment and exhibit hypersensitivity to chlorate. Identical to Chloride channel protein CLC-a (AtCLC-a) (CLC-A) [Arabidopsis Thaliana] (GB:P92941;GB:O64990;GB:Q93YS0); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:AT5G33280.1); similar to CLC-C (chloride channel C), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G49890.1); similar to CLC-B (chloride channel protein B), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT3G27170.1); similar to chloride channel [Glycine max] (GB:AAY43007.1); similar to Chloride channel protein CLC-a, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98017.1); similar to CLC-Nt2 protein [Nicotiana tabacum] (GB:AAD29679.1); contains InterPro domain Cl- channel, voltage gated; (InterPro:IPR001807); contains InterPro domain Chloride channel plant CLC; (InterPro:IPR002251); contains InterPro domain CBS; (InterPro:IPR000644) -0.101153102955268 -1.04495203631947 0.319330642134053 1 0.571900113559728 21.6991103850459 -0.101153102955268 0.0901971251474012 AT5G67430_at 1.62344783214550 1.26396415732993 1.62064632279204 1.28522473846898 1.03748310413832 1.14715788046447 0.984975554195157 1.26661382474602 1.43538714008741 0.727800374393315 1.29661525621237 1.56014092479117 1.31885452292081 1.22792028670349 1.61552301951826 1.30764641121644 1.66533296377171 1.81644073902129 1.09232819081618 0.187452723754363 0.186179537876744 0.185425337138366 0.185937291470907 0.195697354616194 0.188019179934213 0.185425337138366 0.187969110034753 0.189312342263980 0.186036602521607 0.191069134478255 0.185863160328825 0.191766934820325 0.189733546307068 0.185569151880792 0.185509914437107 0.185483624746320 0.187431999745378 0.189110750830595 5 5 + 26928522 26929047 26928829.273 26927541 26929327 + gene protein_coding_gene TRUE TRUE AT5G67430.1 GCN5-related N-acetyltransferase (GNAT) family protein similar to HLS1 (HOOKLESS 1), N-acetyltransferase [Arabidopsis thaliana] (TAIR:AT4G37580.1); similar to putative N-acetyltransferase hookless1 [Brassica napus] (GB:CAC80824.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.104807826689752 1.04463474338412 0.319470679366235 1 0.57159652914001 2.55930476042759 0.104807826689752 0.0998759057170069 AT5G56750_at 4.29172569456185 4.41275883994347 5.36933591629162 5.1896213268431 6.65898190757362 5.70787116047758 5.14036088741412 4.15431654589531 4.77346770753336 4.20774986911262 6.70000859732462 5.68291966095065 5.60457587667614 5.27700125768181 5.23078422856202 5.64795386346771 4.671464949998 5.22190332425938 4.56548705281218 0.256225847912555 0.255979780409647 0.258365920610355 0.264787460914405 0.261962148340810 0.278464669845079 0.256465260752565 0.257814361348407 0.265128554803932 0.264283138977355 0.255979780409647 0.255979780409647 0.258949051874925 0.268467562439825 0.263044114447246 0.263192751808337 0.274018817050525 0.273163515214559 0.255979780409647 5 5|0 +|/ 22976837 22977765 22977509.556 22975103 22978142 + gene protein_coding_gene TRUE TRUE AT5G56750.1 Ndr family protein similar to Ndr family protein [Arabidopsis thaliana] (TAIR:AT2G19620.1); similar to SF21C1 [Helianthus annuus] (GB:ABB79742.1); contains InterPro domain Ndr; (InterPro:IPR004142) 0.174607821142859 1.04207061199767 0.320604049198632 1 0.56914588315517 10.1256938747173 0.174607821142859 0.240031338585353 AT5G09370_at 1.69129831462283 1.66549763631332 1.94268151777605 2.00353801935329 1.52346147982221 2.1110509119402 1.83166812549415 1.61694320425304 2.31342553577824 1.76427125972105 2.32369158956036 2.18543694738442 1.80102554635754 1.93059118097889 1.61064387119364 1.73643222855718 1.86560932118265 2.12292545423828 2.07210753296039 0.19534277074245 0.189484525033665 0.197234772811812 0.189078733603931 0.191120433808708 0.186737730946771 0.193835809785502 0.197503257346866 0.189883839348613 0.191344434625161 0.187529236673193 0.187483348581318 0.191948922233644 0.190681828248650 0.1890381148504 0.194884035919219 0.197421806772548 0.193163009140537 0.191921419475206 5 5|0 -|/ 2909884 2910392 2910209.6 2909364 2910546 - gene protein_coding_gene TRUE TRUE AT5G09370.1|AT5G09370.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G64080.2); similar to xylogen protein 1 [Zinnia elegans] (GB:BAD24657.1); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.107982174647085 -1.04024630737329 0.321412241249076 1 0.567405252025998 3.79675704798931 -0.107982174647085 0.108864633012318 AT5G61700_at 1.75623174353212 1.60437982501582 1.5968297188255 1.53800203714074 1.09099353734073 1.80043926992974 1.54348687832253 1.40747179844383 1.78003667705069 1.21059444794440 1.25790546097357 1.22487999407824 1.99129876602207 1.53166115332918 1.76928988735151 1.36935201714720 1.82247898746318 1.67415246667761 1.57611769733558 0.228586668407516 0.232178034613057 0.23402028859582 0.235586304221795 0.228586668407516 0.231896898549027 0.231353570245998 0.242229566125016 0.239447240226131 0.237653385799877 0.239934360086317 0.228586668407516 0.230891611528546 0.228776481454871 0.237127830384601 0.231587906110247 0.228586668407516 0.237397421528781 0.235006816874408 5 5|0 +|/ 24814412 24815099 24814875.3 24811090 24815170 + gene protein_coding_gene TRUE TRUE AT5G61700.1 ATATH16 (ABC2 homolog 16); ATPase, coupled to transmembrane movement of substances member of ATH subfamily Identical to Putative ABC2 homolog 16 (ATH16) [Arabidopsis Thaliana] (GB:Q9FLT8); similar to ATATH2 (ABC2 homolog 2), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47740.1); similar to ATATH6 (ABC2 homolog 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47780.1); similar to ATATH14 (ABC2 homolog 14), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G61740.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAC99368.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD25026.1); similar to ABC transporter, putative [Medicago truncatula] (GB:ABE91253.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.116237553604388 -1.03953641175554 0.321727146739614 1 0.56672857601076 3.09341782560581 -0.116237553604388 0.128146137315647 AT5G39650_at 1.65117823298473 1.38570776378562 1.68572022055459 1.50660063563971 1.51236050329449 1.30411622407571 1.64642325063671 1.33658107791862 1.39354592171695 1.45516760689295 1.61977551858360 1.28015703270430 1.59661762542420 1.26495065411398 1.5200740817498 1.36833167317151 1.86108653073231 1.44659814155860 1.59319863913167 0.207538073715132 0.198147903335200 0.203154093589948 0.201427952464876 0.212609138599033 0.202074749059694 0.207962913062530 0.199276199059507 0.20194816855912 0.214080291277935 0.198745340431619 0.205729619763718 0.208219043725646 0.205486392112874 0.201861577016455 0.199752844090820 0.203699400531226 0.20536920442043 0.201914231509489 5 5 + 15892696 15893084 15892839.333 15892427 15893344 + gene protein_coding_gene TRUE TRUE AT5G39650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09157.1); similar to 52O08_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67548.1); contains InterPro domain Protein of unknown function DUF679; (InterPro:IPR007770) -0.0987478326237948 -1.03893409738146 0.321994510863312 1 0.566154736922299 2.99125413686226 -0.0987478326237948 0.0851186648202029 AT5G62290_at 5.48699318906578 5.63829926408154 6.50619737983146 6.71249873516887 6.65138120233421 6.86804422309588 6.311911887384 6.03605879854546 4.24841417797824 4.46039407990132 5.24826332604642 5.22587932199711 5.49617029496914 5.37970584517461 5.45626509096298 5.81927143606059 5.75980678049397 5.38642470285554 4.75044096197446 0.207154660912897 0.202108269031476 0.203243186185109 0.208514549733917 0.206401784464967 0.216804744784692 0.197563920138839 0.198641568496936 0.201715772069110 0.21219143449334 0.198938365614157 0.202349714596908 0.197563920138839 0.204072695631594 0.206044256389768 0.202570419926909 0.207073686756633 0.199536026254888 0.209246018902847 5 0|5 /|+ 25037095 25038001 25037543.625 25036713 25038357 + gene protein_coding_gene TRUE TRUE AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein similar to Os10g0170000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064231.1); similar to Os03g0249300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049559.1); similar to Unknown protein [Oryza sativa] (GB:AAM01023.1); contains InterPro domain Nucleotide-sensitive chloride conductance regulator; (InterPro:IPR003521) -0.0952857402357444 -1.03786159482587 0.322471000519412 1 0.565133597782311 11.2553679631574 -0.0952857402357444 0.0751327478063776 AT5G43600_at 7.65311931990858 7.79045803667792 8.6094631148134 8.82123055111375 9.06523739703487 8.65298228216248 8.17117261039344 7.74487684608251 8.14869836568673 7.60337887233858 8.8376343879361 8.64811875039106 8.65778887337162 8.7580450733646 8.8394194194181 9.15732718198186 8.76091316057744 8.73221971653099 7.6227548605355 0.173472459078594 0.170182388348163 0.176372610199704 0.170139822567513 0.169630894002906 0.174600727465222 0.174534679875690 0.171421793873628 0.191603734044907 0.193886602860499 0.167795145734644 0.167795145734644 0.169812610332839 0.168065594835965 0.170391327058087 0.168991650341310 0.167795145734644 0.175745073480884 0.17744645157767 5 5|0 +|/ 17531261 17532460 17531781.7 17529703 17532722 + gene protein_coding_gene TRUE TRUE AT5G43600.1 N-carbamyl-L-amino acid hydrolase, putative similar to ATAAH (ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE), allantoate deiminase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT4G20070.1); similar to Peptidase M20 [Medicago truncatula] (GB:ABE83040.1); similar to amidase, hydantoinase/carbamoylase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99240.2); contains InterPro domain Peptidase M20; (InterPro:IPR002933); contains InterPro domain Amidase, hydantoinase/carbamoylase; (InterPro:IPR010158) 0.108693678328229 1.03645460683247 0.323096894250226 1 0.563795273411766 16.6088395297567 0.108693678328229 0.111535003369213 AT5G66590_at 6.95561852906711 7.15730516443287 7.8267033560812 7.95835368143195 8.19633114747456 8.4503127640801 7.71877368658203 8.36740579074476 8.30573006178423 8.39917504452587 9.52317624831301 9.59434873535507 10.1049993975310 9.30564649506905 9.98746294245958 9.94519144396734 9.53437430650942 9.42062752631714 9.66819929242475 0.166128013643844 0.165553357001442 0.153661866493626 0.161348401640262 0.153475915873706 0.152548200439197 0.154378091351908 0.149204591510156 0.160125812147988 0.149204591510156 0.151014536917414 0.149204591510156 0.153181545412929 0.149204591510156 0.158106387216856 0.153988764595027 0.153654155835690 0.152795757967903 0.149204591510156 5 5 + 26591536 26591945 26591709.545 26591407 26592100 + gene protein_coding_gene TRUE TRUE AT5G66590.1 allergen V5/Tpx-1-related family protein similar to allergen V5/Tpx-1-related family protein [Arabidopsis thaliana] (TAIR:AT4G25790.1); similar to STS14 protein precursor (GB:Q41495); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283) -0.115480427247646 -1.03515519572866 0.323675738903802 1 0.562560568631415 17.0628571082461 -0.115480427247646 0.127549572823095 AT5G58630_at 1.32102257851833 1.38879286377280 1.84941163259258 1.57133369648253 1.18008380984081 1.36918831262858 1.27035467397727 1.59303094133644 1.22810967355025 1.31387805711494 1.67232072068305 1.44638517510372 1.37946490950233 1.59829109760968 1.34673222413283 1.39253209004536 1.73104974654504 1.71706238032400 1.19981772368490 0.216897182403899 0.212262333908172 0.215431241252404 0.217670478219111 0.213385366359925 0.212512353013552 0.216068906407185 0.220201437374058 0.221604380103106 0.212291915614445 0.216928404694207 0.227868438079102 0.220867142212072 0.216555027937602 0.215478621028608 0.212262333908172 0.217782266938067 0.216513563905422 0.218025117170792 5 5|0 -|/ 23713371 23714008 23713648.9 23713334 23714678 - gene protein_coding_gene TRUE TRUE AT5G58630.1 contains domain Glycosyl hydrolase domain (SSF51011) 0.0970910516939916 1.03463394709306 0.323908155521642 1 0.562065625501447 2.83427645253198 0.0970910516939916 0.08150133116517 AT5G26080_at 1.32481917438416 1.45502157140985 1.60281411112900 1.67145901764001 1.10690911362989 1.38672220370450 0.88442319666465 1.38203078867087 1.96549420514892 1.81026177134842 1.60118573358366 1.22125994136745 1.60167161191653 1.64767338653356 1.61974788985717 1.58787301324341 1.97390274194356 1.76570796733884 1.62668170506727 0.209871872601223 0.209946139505299 0.208078600106075 0.211272992281681 0.206856154450299 0.206856154450299 0.209211725001161 0.209819070158835 0.210406203351696 0.214026882858522 0.210788556937722 0.206856154450299 0.213085748684267 0.208740687486292 0.209994128624874 0.206856154450299 0.212455741280144 0.214262688200997 0.211855251538143 5 5 + 9108005 9108361 9108171.545 9108000 9108425 + gene protein_coding_gene TRUE TRUE AT5G26080.1 proline-rich family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G20850.1); similar to Extensin precursor (Cell wall hydroxyproline-rich glycoprotein) (GB:P13983); contains InterPro domain Pistil-specific extensin-like protein; (InterPro:IPR003882); contains InterPro domain Glutelin; (InterPro:IPR000480) -0.104635081683464 -1.03451789651289 0.323959917621554 1 0.561955458782833 3.06587007027640 -0.104635081683464 0.102025003144341 AT5G09940_at 1.38616697040531 1.60523919371100 1.57174828277518 2.21359518993746 1.58629937364073 1.65306458607643 1.23547109066964 1.61330429429659 2.18358282739847 2.02690380645900 1.90274688192561 1.68738068108021 2.20063617568097 1.46494050026630 1.86785616273334 1.93040396217799 1.69880548273209 1.97548842159390 2.08197382346706 0.207906096638454 0.216964669951205 0.211379967268982 0.212840214528928 0.216132234818682 0.212892018939735 0.22008977894418 0.209419653455651 0.210952688021617 0.211363844382353 0.211939534060743 0.207906096638454 0.214217624309196 0.21271679297677 0.218852723117679 0.208036951680409 0.210241118989068 0.211633161994668 0.214323643494062 5 5 + 3101277 3101808 3101535.727 3101193 3101834 + gene protein_coding_gene TRUE TRUE AT5G09940.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59760.1); similar to 117M18_2 [Brassica rapa] (GB:AAZ66921.1); contains InterPro domain Protein of unknown function DUF1635; (InterPro:IPR012862) -0.118602269780062 -1.03350797118795 0.324410635941949 1 0.560997156099271 3.57737067400503 -0.118602269780062 0.134846745264566 AT5G23610_at 8.6617624133338 8.58071717406122 9.57340684707742 9.45865931120335 9.7251767739488 9.56796411106556 8.33671169749776 8.1318003040761 8.3791527046755 8.42532292073474 9.32147591530888 9.19816889354085 8.987668633435 8.73539782001718 8.65642764921068 9.36702859863355 9.12004506720782 8.9548090059534 8.50632390796718 0.149956241894452 0.147357952445583 0.147465195959653 0.148168854298447 0.144854623260190 0.147619046455107 0.151037181010892 0.150692212306796 0.154762277794303 0.166947545316832 0.151699118182580 0.143270237570996 0.144891333027772 0.153808798863584 0.154109357858058 0.145396837752907 0.150809847756336 0.146754637956463 0.157000736122278 5 5 - 7957649 7958484 7958151.455 7957343 7960275 - gene protein_coding_gene TRUE TRUE AT5G23610.1|AT5G23610.2 similar to SWI1 (SWITCH1), phospholipase C [Arabidopsis thaliana] (TAIR:AT5G51330.1); similar to meiosis protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97916.1); similar to Expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95531.1); similar to Os03g0650400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050785.1) 0.0881152304732238 1.03317828082834 0.324557874350762 1 0.560684480585613 17.7443052668859 0.0881152304732238 0.0508791978640683 AT5G55650_at 1.23375345462974 1.37968127203294 1.50511795130506 1.51333548584542 1.54140708155129 1.08515020709451 1.50319495609684 1.27883525550527 2.00530391576636 1.54207122212705 1.45085184791818 1.87464718397662 1.42679365493508 1.70478675563542 1.27643990350857 1.53580272394734 2.07022707387378 1.75895002072427 1.51304546023294 0.233758874148196 0.231846013319296 0.244238500036391 0.230930733896122 0.227690837755679 0.233895967111351 0.233405052550243 0.226524431154532 0.231462093687777 0.228211891610082 0.226540283506405 0.229619580949706 0.247691133660357 0.231842636444075 0.227662032870965 0.22838115338571 0.237353556831622 0.234475641915385 0.232080480470559 5 5 + 22553613 22553811 22553701.545 22553586 22554050 + gene protein_coding_gene TRUE TRUE AT5G55650.1 unknown protein -0.100480042771112 -1.03288618725602 0.324688363848293 1 0.560407528439599 3.04211908881115 -0.100480042771112 0.0915506713747854 AT5G61990_at 3.37156944504226 3.68826951528415 4.0984858833421 4.48155643443657 4.71723428019677 4.58302838871251 3.52743951125337 3.89099629792395 3.61733778126581 3.38968648799479 3.94213074515952 4.46401614452866 4.29769427774051 4.45019592566286 4.39353905371895 4.69714646365716 4.25556055996567 4.50256816128879 3.57715205884306 0.230234708520629 0.230234708520629 0.236716644826021 0.235231238306144 0.231444680461178 0.244340958393427 0.230234708520629 0.233398637765912 0.248682696674887 0.248636734846397 0.230234708520629 0.230477540624706 0.232405468861745 0.245758252284087 0.233295123937923 0.230234708520629 0.242591292432175 0.231674838376708 0.233141591949909 5 5 - 24917475 24917934 24917706.364 24916832 24920343 - gene protein_coding_gene TRUE TRUE AT5G61990.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Os07g0300200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059422.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE89048.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.10715049661944 1.03142760404826 0.325340555281049 1 0.559025495620617 7.99653006577387 0.10715049661944 0.109069305071591 AT5G21030_at 1.30147099912451 0.688013670077978 1.97696501660856 1.20292284978225 0.778071220262837 0.539307560766461 0.172482984079257 1.01694950351324 1.78355948184231 1.47658327258623 1.19776919038089 0.660827234063887 0.68491948384662 0.941443965515112 0.555235265728815 0.933125133000901 1.13714517345781 1.47849300645666 1.14471964153486 0.258775890191131 0.252823970049437 0.246678784104063 0.251248469325034 0.246678784104063 0.261084140699554 0.255647902498544 0.246678784104063 0.257931140837869 0.246678784104063 0.246678784104063 0.2527155949582 0.25326265773018 0.272293293655785 0.25614134409816 0.247258385791916 0.259252690661886 0.275360442072115 0.251366738698183 5 5 - 7139919 7140646 7140266.571 7139894 7144274 - gene protein_coding_gene TRUE TRUE AT5G21030.1 PAZ domain-containing protein / piwi domain-containing protein similar to AGO4 (ARGONAUTE 4) [Arabidopsis thaliana] (TAIR:AT2G27040.1); similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21150.1); similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G32940.1); similar to AGO4-2 [Nicotiana benthamiana] (GB:ABC61505.1); similar to Argonaute and Dicer protein, PAZ; Stem cell self-renewal protein Piwi [Medicago truncatula] (GB:ABE82627.1); similar to AGO4-1 [Nicotiana benthamiana] (GB:ABC61504.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain Stem cell self-renewal protein Piwi; (InterPro:IPR003165) -0.165939872085274 -1.02797091668777 0.326890079739137 1 0.555756492276319 2.16797661146562 -0.165939872085274 0.228642016967743 AT5G40860_at 0.280580965980373 0.780531397628963 0.556602971378063 0.81014638022788 0.538150276226252 0.559145499242032 0.440738372559579 0.58088915715604 0.570987382107354 0.93982203752168 0.572908311987179 0.613573542089204 0.323987242065469 0.185772982777 0.15396876703848 0.08562404998902 1.02420339438177 1.33058518265268 0.702339568155452 0.222016852352166 0.216911018805344 0.221825722764744 0.215745753470803 0.215745753470803 0.216446434015681 0.222337026853413 0.223503572334867 0.228676126406793 0.231751441736786 0.215745753470803 0.215745753470803 0.223698072058367 0.231053297253135 0.224763316857495 0.224353708250091 0.228067477636109 0.215745753470803 0.220927650192974 5 5 + 16388856 16389128 16388994.25 16387698 16389213 + gene protein_coding_gene TRUE TRUE AT5G40860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27210.1); similar to Os04g0380200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052596.1); similar to OSJNBb0089B03.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE03997.1); similar to Os01g0920100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045217.1) -0.103178926362688 -1.02768696369079 0.327017610862279 1 0.555488349019524 1.20537025924195 -0.103178926362688 0.100060580153178 AT5G62120_at 0.862570666590232 1.45930538412183 1.87482116541335 2.33905987024046 0.877471544127193 1.29198003978093 0.937005620148091 1.43617311755043 1.42625829043890 1.86402583771499 1.12628290294030 1.14317966341217 1.07216073926893 0.610120727142442 0.88999402885153 1.28212739621860 1.06116437911123 1.54039852107539 1.51324971104956 0.195539415252766 0.196681683014197 0.196758487212435 0.194328323147729 0.195196287582614 0.200570621728944 0.196481763830538 0.195163964365438 0.194328323147729 0.207423213856581 0.198827730299400 0.195159232382834 0.199984078410338 0.197630760481718 0.200451583953287 0.198430327375365 0.202717550547772 0.194328323147729 0.197322661719721 5 5 - 24964196 24965406 24964488.273 24964181 24965451 - gene protein_coding_gene TRUE TRUE AT5G62120.1 ARR23 (ARABIDOPSIS RESPONSE REGULATOR 23); transcription regulator member of Response Regulator: B- Type similar to ARR21 (ARABIDOPSIS RESPONSE REGULATOR 21), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT5G07210.1); similar to Putative two-component response regulator ARR21 (GB:Q9LYP5); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) -0.135997112512677 -1.02708193546021 0.327289469278785 1 0.554917205943058 2.73072667157343 -0.135997112512677 0.172412771487058 AT5G56640_at 0.966193692342472 1.15590260830474 1.44606811788522 1.44912953063215 1.17507444746030 1.50005311718802 0.932119647269809 1.39852707008726 1.65573553330929 1.61041641302739 1.59579956365596 1.51623736986616 1.44832157226637 1.42313110380158 1.82196598962781 1.71771761187015 1.70634832219078 2.25083200531401 1.40831826328892 0.251090103905155 0.241270860422175 0.246132923519504 0.246283085953883 0.244345262472842 0.245231361797475 0.250326386796858 0.241566345064714 0.242258526620338 0.243380077941680 0.248641044917352 0.246962212690632 0.243348864909466 0.241987401101612 0.259442922181028 0.250019603595127 0.251366812866531 0.245079832907995 0.245954045278638 5 5|0 -|/ 22944891 22946066 22945431.6 22944555 22946869 - gene protein_coding_gene TRUE TRUE AT5G56640.1 MIOX5 (MYO-INOSITOL OXYGENASE 5) Myo-Inositol Oxygenase gene family Identical to Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol oxygenase 5) (AtMIOX5) (MIOX5) [Arabidopsis Thaliana] (GB:Q9FJU4;GB:Q8LFV4); similar to MIOX4 (MYO-INOSITOL OXYGENASE 4) [Arabidopsis thaliana] (TAIR:AT4G26260.1); similar to Protein of unknown function DUF706 [Medicago truncatula] (GB:ABE91981.1); contains InterPro domain Protein of unknown function DUF706; (InterPro:IPR007828) 0.104539694356744 1.02701917017688 0.327317681344435 1 0.554857971381988 2.87448399332923 0.104539694356744 0.103709548415891 AT5G53950_at 1.14668986211580 1.34043137383946 1.76922193047856 1.05508977655845 0.93858979788103 1.06729112551758 0.95439400878762 0.905097607795863 1.50455702950555 1.66384093676536 1.06582240619514 1.14340983265605 1.44336450132152 1.41981214655578 1.38829554926628 1.34622204509132 1.44918720505117 1.24240303047772 1.31930484847009 0.224756504406140 0.224242578378323 0.230592462473054 0.225181636164828 0.222543286718477 0.221375976961449 0.228531432315778 0.221483927353989 0.227295620865368 0.224277684885157 0.228243371343225 0.225663917868321 0.228689391648639 0.220138994949837 0.222131431722375 0.227579256471469 0.228980989030849 0.225844061620305 0.221557091559978 5 5 - 21919206 21919725 21919488.545 21919192 21921049 - gene protein_coding_gene TRUE TRUE AT5G53950.1 CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM similar to CUC1 (CUP-SHAPED COTYLEDON1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G15170.1); similar to NAM [Petunia x hybrida] (GB:CAA63101.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.115601878280096 -1.02544463986271 0.328026001730060 1 0.5533729663105 2.55120844928373 -0.115601878280096 0.130253346340246 AT5G63830_at 3.59916942148364 3.62668722381620 4.1416016771686 4.30490626706295 4.97943936490087 4.9147125737694 3.37816553277786 4.05722864149082 3.55963707488697 3.5947993062802 3.97015637866512 4.01539708542028 3.89485501283304 3.72724994149345 3.49405890041207 4.0601355302124 3.70797287082847 3.83910251399858 3.47184209227729 0.214937345321688 0.213539986629275 0.224197872831091 0.221346504453898 0.225621564333713 0.236397834942174 0.217323725616777 0.221476577616381 0.216716833552862 0.219562002138389 0.218566932914248 0.217562789990421 0.218115450678327 0.217020029562146 0.215218917717245 0.215097950466029 0.230516427523727 0.227196920570712 0.215465814372555 5 5 - 25560819 25561366 25561152.364 25560776 25562017 - gene protein_coding_gene TRUE TRUE AT5G63830.1 zinc finger (HIT type) family protein similar to Predicted Zn-finger protein (ISS) [Ostreococcus tauri] (GB:CAL52783.1); similar to Os10g0520700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065086.1); contains domain ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATED (PTHR15555); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGI19 (PTHR15555:SF4) -0.111732706215711 -1.02539002386663 0.328050591803823 1 0.553321488613319 7.815593264666 -0.111732706215711 0.121476717148832 AT5G37640_at 2.21971074406624 2.15535689711742 2.5859381804994 2.75404453939391 2.08509194151858 2.71275586001431 1.87994888398676 2.17140151539979 2.18189091346416 2.42666466139070 2.48082871853686 2.07084526990978 2.69709693783579 2.46865183062406 2.33578785388872 2.56271509604754 2.98070234881482 2.48724062271909 2.08734099223782 0.175294388191447 0.169055470282311 0.177035482462471 0.180373678806514 0.169951994430506 0.175492571446104 0.170889796337046 0.17575681752744 0.176261101784153 0.173006830589269 0.177175888459206 0.169055470282311 0.179418262374761 0.174816575320348 0.175287495890685 0.175889941037695 0.173978076429894 0.178500118279579 0.175490940321943 5 5 - 14970047 14970579 14970294.455 14970012 14970980 - gene protein_coding_gene TRUE TRUE AT5G37640.1 UBQ9 (ubiquitin 9) polyubiquitin gene with 4 ubiquitin repeats. The first ubiquitin repeat has 16 amino acid replacements. similar to UBQ3 (POLYUBIQUITIN 3), protein binding [Arabidopsis thaliana] (TAIR:AT5G03240.3); similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to UBQ14 (ubiquitin 14), protein binding [Arabidopsis thaliana] (TAIR:AT4G02890.3); similar to ubiquitin [Solanum lycopersicum] (GB:CAA51679.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.112701625284100 1.02524694700756 0.328115016620816 1 0.553186643587077 4.6917556238302 0.112701625284100 0.123744104018364 AT5G50990_at 3.17030091513086 3.02151188020462 3.74336718922524 3.77293793056233 3.65854953950059 3.77880499781979 3.2102547453414 3.65967885870854 2.90622815111167 3.08216442062452 3.24432315379289 3.70128955130168 3.55701096124583 3.3905511391529 3.31121986604945 3.97656981882998 3.45766052227609 3.51931898213565 3.20581551238246 0.204293902933415 0.204321289625668 0.206913639251156 0.211687648247187 0.207451594164295 0.210443147633547 0.212235156762196 0.204608720583388 0.208894071516257 0.213702108768754 0.205141030663757 0.201685363124908 0.201552744933686 0.205720298673422 0.207066203376886 0.202781306026773 0.205861057173339 0.219099540815509 0.20430820473821 5 5 + 20757911 20758444 20758149.818 20756645 20758507 + gene protein_coding_gene TRUE TRUE AT5G50990.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT3G62890.1); similar to PPR868-14 [Physcomitrella patens] (GB:BAD67154.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE91570.1); similar to Os07g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058748.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0971915040017364 -1.02414630975366 0.328610927489855 1 0.55214983758262 6.79416527075548 -0.0971915040017364 0.0846829898518032 AT5G57080_at 1.62113799135767 1.68672795092208 2.03190502374594 1.77840897906774 1.78739851044055 1.81034645869127 1.59416601587943 1.47230587086372 1.92529244603511 1.73991447715081 2.32840127022610 1.76547038684264 2.03487493516716 1.88577953487190 2.01263264279121 1.51924456596755 1.93012128786980 1.93172129790245 1.54406189104055 0.164695408713088 0.158905319998005 0.163284524513752 0.161740077050458 0.158905319998005 0.167304752916227 0.161568258967608 0.158905319998005 0.172865835358079 0.167306227119758 0.168721404817563 0.162847435596446 0.162486338233103 0.161619833048233 0.160002001447655 0.173749670513092 0.172918807170592 0.158905319998005 0.163884177584663 5 5|0 +|/ 23116225 23116570 23116420.429 23116185 23116594 + gene protein_coding_gene TRUE TRUE AT5G57080.1 unknown protein 0.0871672735453768 1.02405842134317 0.328650551121989 1 0.552067084928682 3.55402643926122 0.0871672735453768 0.0501377294065263 AT5G28290_at 3.10167886649624 3.64039417560413 2.35959825181149 2.42665008500187 2.85569235328949 2.09079548831242 2.12095861261395 2.61771975853419 2.57810597913059 2.92204772555584 5.6314689507508 6.17399093310026 3.67482942522066 4.54214771116922 5.47833811692646 3.76974442920149 2.04674373988409 3.83446399649225 2.71326391553914 0.234974448957685 0.234974448957685 0.245324945407384 0.244729516926105 0.238084027794389 0.245311337755353 0.237467291810326 0.236584939342637 0.245704556433705 0.244439062661248 0.241117010928967 0.234974448957685 0.234974448957685 0.251403656109507 0.239329608452126 0.235145385787003 0.262164905574654 0.248316910104465 0.234974448957685 5 5 - 10278949 10279450 10279257.727 10278695 10282618 - gene protein_coding_gene TRUE TRUE AT5G28290.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G54510.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G04810.2); similar to LSTK-1-like kinase [Lycopersicon esculentum] (GB:AAL04423.1); similar to NIMA-related protein kinase [Populus tremula x Populus alba] (GB:AAL79042.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.141310118191071 1.02384450303197 0.328747008946984 1 0.551865690844201 6.21757184208381 0.141310118191071 0.183678510055720 AT5G19140_at 13.4203073271959 13.5977657927329 14.0006013085614 14.0181672118770 14.0310827878716 13.9986959693857 13.3410519437145 13.3448569803375 13.4579551452925 13.2358090978217 13.7303473788618 13.4045009102366 13.9090953915520 13.8778482430999 13.1411796363425 13.7272430600778 13.5849287342310 13.6943384409417 13.0897736947863 0.0698402699199226 0.0678293663763502 0.069354296142054 0.0673725077768 0.0692766738970036 0.0696916133769039 0.069167388474811 0.0673781784193992 0.068120511009333 0.0701398049769552 0.0687000663994428 0.0676966775469215 0.0704284118898979 0.0676467769592324 0.0680393826586116 0.0676382595575631 0.0689799789978996 0.0690730519856901 0.0685132430297088 5 5|0 +|/ 6423510 6425222 6424612.333 6423155 6426168 + gene protein_coding_gene TRUE TRUE AT5G19140.1|AT5G19140.2 auxin/aluminum-responsive protein, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43830.1); similar to aluminum-induced [Brassica napus] (GB:BAA25999.1); contains domain ASPARAGINE SYNTHETASE (PTHR11772); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.0835661847795075 1.02344188852954 0.328928608767567 1 0.551486740089155 27.1664984337353 0.0835661847795075 0.0313718333831782 AT5G47510_at 1.44159937284471 1.38678767648708 1.56417563002020 1.59298300640732 1.52147026544535 1.81790802412434 1.47488506675757 1.50725565833896 1.39716039501089 1.73189430743920 1.77989277112066 1.75877930565814 1.61418654556017 1.62209596202313 1.74692966714326 1.71122964080633 1.52785870062553 1.77986008323016 1.27240575719266 0.191244837781894 0.198027363437885 0.199254788248623 0.187921530534295 0.190215316856995 0.206268073753610 0.192719561549574 0.192556520052556 0.197376270870017 0.197117677587077 0.195715446851459 0.191504084604972 0.201104452343537 0.191268175580111 0.190043491958941 0.189218319795528 0.195744098506358 0.200470810099206 0.190865922607310 5 5|0 +|/ 19293208 19294178 19293613.222 19292275 19294283 + gene protein_coding_gene TRUE TRUE AT5G47510.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein similar to phosphatidylinositol transporter [Arabidopsis thaliana] (TAIR:AT2G21540.2); similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G18180.1); similar to CRAL/TRIO domain containing protein [Brassica oleracea] (GB:ABD64976.1); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal; (InterPro:IPR011074); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal; (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal; (InterPro:IPR008273); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071) 0.0876937938233485 1.02321825714060 0.32902951020984 1 0.551276304576585 3.11826187308744 0.0876937938233485 0.0527056969876267 AT5G23150_at 3.63865925186065 3.43039808861872 3.56351369477134 3.99394754415272 4.77148518782032 4.38480601179741 3.18999956886981 2.64622066220182 3.72187505280332 3.07644370731254 3.83391386162698 4.18901080941033 3.78926518422636 3.54729486414711 3.93450747480941 4.29748447900197 4.33546771886961 3.9517139322964 3.33210336622716 0.240887995839459 0.235413428707195 0.243027532629236 0.239793291313235 0.240657883644197 0.245958816416812 0.235833769974565 0.236049838793907 0.235228140400723 0.233439937485816 0.238153508939644 0.234500666360772 0.232847384415901 0.236738033929875 0.246458506812332 0.237000120859584 0.240963760264698 0.232847384415901 0.234532992987277 5 5|0 +|/ 7791229 7792038 7791559.222 7785838 7792492 + gene protein_coding_gene TRUE TRUE AT5G23150.1 HUA2 (ENHANCER OF AG-4 2) Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08230.1); similar to PWWP; Regulation of nuclear pre-mRNA protein [Medicago truncatula] (GB:ABE89069.1); similar to Putative PWWP domain-containing protein [Brassica oleracea] (GB:AAV25878.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain PWWP; (InterPro:IPR000313) 0.120695211146056 1.02283473404335 0.32920260758847 1 0.550915498434996 7.3831985842597 0.120695211146056 0.142059043587167 AT5G43020_at 2.18239739204530 2.07227989874604 2.00895313813728 2.15033911705485 2.00717651823110 2.37000807354170 1.72879255152809 1.90396886335724 1.96790296730077 1.83877481817788 1.82901585153749 2.15835898164074 2.01085999128324 1.55884249015627 1.87064718549467 1.99334067816421 2.06951190819816 2.34184934374424 2.15301892629699 0.186962801775221 0.183633264677462 0.186190666792256 0.183633264677462 0.193140293811760 0.190483670344549 0.183633264677462 0.194584904285834 0.197438709808697 0.188758876824137 0.190888133692272 0.183633264677462 0.188656656355658 0.195003281139108 0.185710495237845 0.184813928767305 0.189198425868883 0.183633264677462 0.195519458803528 5 5 - 17272738 17273196 17273003.182 17272519 17274970 - gene protein_coding_gene TRUE TRUE AT5G43020.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G67200.1); similar to putative receptor kinase [Malus x domestica] (GB:ABA82080.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -0.0942801816057468 -1.02282465573836 0.32920715719191 1 0.550906018561671 4.03579888126483 -0.0942801816057468 0.0763108936133467 AT5G38730_at 2.49934764165927 2.70186718465147 3.35351376927544 3.46392477215232 3.50194889816219 3.36473790748048 3.14502976722298 2.31410263776361 2.41181791988364 2.64200830810083 2.41258313006077 2.63474753232228 3.32068116508172 2.5060010742708 3.16449751107029 2.71346491071858 2.60509755931483 2.73613714646549 2.47269275495461 0.218296600404112 0.213340922870234 0.213576795717350 0.214012452169386 0.219754540607002 0.219153294095921 0.209340981918729 0.209340981918729 0.211418488560564 0.212222318600873 0.218322947434962 0.21342590251223 0.217105043629872 0.211439324182881 0.211429988726207 0.213347728326333 0.222926134726230 0.216070020077403 0.209340981918729 5 5 + 15529456 15529837 15529657.818 15528131 15529921 + gene protein_coding_gene TRUE TRUE AT5G38730.1 pentatricopeptide (PPR) repeat-containing protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD23061.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.124548235563545 1.01940347514210 0.330754265229721 1 0.547692336474734 5.67830452961736 0.124548235563545 0.151110665080258 AT5G12270_at 2.62573207727991 2.24986562234186 2.53831442983901 2.56393164648116 2.39387080185663 2.39969039266739 2.63472648989865 2.14733589266196 2.28543880402889 2.40268638278875 2.78941625847539 2.5266892446729 3.05392000394511 2.31625321186021 2.30069162040023 2.56733643034206 2.66671375153168 2.91464528858344 2.41201309928477 0.227477692551916 0.224109503512860 0.227724975760179 0.227923773158715 0.224396071989072 0.228797859589808 0.221016537450736 0.228070674012699 0.229065961346475 0.227949883466899 0.22492515207534 0.224308013662015 0.232425004900313 0.227453919842266 0.229256345031491 0.221016537450736 0.231323099022084 0.221016537450736 0.224253204032172 5 5 - 3970252 3970568 3970416.818 3970132 3971302 - gene protein_coding_gene TRUE TRUE AT5G12270.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G13610.1); similar to putative flavanone 3-hydroxylase [Oryza sativa (japonica cultivar-group)] (GB:AAL58118.1); similar to Os04g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053651.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.10487167196228 -1.01900269287189 0.330935857262321 1 0.547316430817487 4.94851891325858 -0.10487167196228 0.106610001631159 AT5G16690_at 1.52854443298695 1.48896295300200 2.08512072617407 2.20757127933436 1.34163565159939 1.34807639325368 1.84884942338593 1.93359499271242 1.76881667762034 1.60313704922391 1.60346933166217 1.74663264181608 1.59401070190401 1.67552073713195 1.62306357737607 1.52368959064754 1.99938231157457 2.07838549078995 1.68081907658679 0.197752541182234 0.197752541182234 0.203095023957381 0.211568779012165 0.197752541182234 0.198146516497408 0.197752541182234 0.203936511728921 0.197752541182234 0.200329773609311 0.208191548585908 0.200713207860687 0.199366477634934 0.207136567447435 0.201360939772974 0.201240827956281 0.203001683887245 0.197752541182234 0.203790228335679 5 5|0 +|/ 5476213 5478746 5477768.111 5474397 5479954 + gene protein_coding_gene TRUE TRUE AT5G16690.1 ATORC3/ORC3 (Origin recognition complex protein 3); protein binding Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b. similar to ori (GB:BAC56110.1); similar to Os10g0402200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064550.1); contains InterPro domain Origin recognition complex subunit 3, N-terminal; (InterPro:IPR010748) -0.0825595819309876 -1.01899986286363 0.330937139784879 1 0.547313776892657 3.43018293105933 -0.0825595819309876 0.0266886685588606 AT5G62080_at 1.38438231857420 1.49321044042087 1.67152238254987 1.63513032980683 1.21329634227107 1.15441898195841 0.935219800792345 1.47428138124583 1.65609120827272 1.91995888636370 1.87653580619630 0.939295584886044 1.73323795624527 1.5473533611762 1.27391149460935 1.36199807832097 1.51207111633868 1.9198821123259 1.26964584250341 0.203911779455032 0.215368182485044 0.204015361741848 0.214326099878644 0.207241616342221 0.20629758643272 0.202310709648794 0.207527892969497 0.223716498863375 0.209851883660868 0.206853910864718 0.207076073630779 0.213735770898717 0.204923152175029 0.211625978863613 0.202310709648794 0.216672878759776 0.213849262741585 0.213066502087106 5 5|0 -|/ 24951426 24951591 24951499.4 24950697 24951671 - gene protein_coding_gene TRUE TRUE AT5G62080.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G07230.1); similar to Tapetum-specific protein A9 precursor (GB:Q05772); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.100696261118939 -1.01857809711707 0.331128319693314 1 0.546918320010178 2.9380665811069 -0.100696261118939 0.0959200450446897 AT5G48520_at 3.67750753460208 4.35292519563529 4.65339384972409 4.14802377744869 5.84684644813453 4.78077804209098 4.7267979808901 4.56298621497407 4.19448200756151 4.01975486738489 5.63847598421949 5.86671333400991 5.89232195628754 6.15559461773593 5.69191791260314 5.60006994210956 5.56619354839954 4.98248294164197 4.04808811306548 0.261504076498035 0.252763166500443 0.261446768274307 0.253301470080232 0.245640050624916 0.279123131579515 0.242557541023111 0.247981696028866 0.257022482316078 0.244156084661205 0.242557541023111 0.242557541023111 0.253031512488426 0.261567465073216 0.256897591190118 0.246989234007013 0.259507372030998 0.247474287329824 0.242557541023111 5 0|5 /|+ 19682675 19683329 19682931.556 19678439 19683662 + gene protein_coding_gene TRUE TRUE AT5G48520.1 similar to Os06g0186500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057010.1); similar to Os07g0185700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059066.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_788829.2); contains domain FAMILY NOT NAMED (PTHR19378); contains domain gb def: Gb|AAB97010.1 (PTHR19378:SF1) 0.168965250107159 1.01849072236336 0.331167935560204 1 0.546836412044793 9.47448885158573 0.168965250107159 0.236960059374827 AT5G27490_at 2.97206861066792 3.5734813900843 3.58347522194096 4.16008560538329 3.85014024301455 3.21250763054879 3.16885986070641 4.13573351802276 2.42070702738549 3.84036598615703 4.40820335846235 5.26178495953198 4.53787014943753 4.67173302245554 5.06599179036701 4.36180681245416 4.15768679279366 4.31104497283273 3.18109496950227 0.276558348558198 0.257402467000754 0.263122053269193 0.266357803703492 0.265300887065764 0.263901332291105 0.257671430089436 0.269698987514129 0.277761144767675 0.257402467000754 0.261313889060854 0.265999781447344 0.257402467000754 0.258745734842318 0.261016508590314 0.261238895873306 0.279751230968782 0.258576182406217 0.261626469289737 5 0|5 /|- 9703139 9703670 9703366.9 9702838 9704678 - gene protein_coding_gene TRUE TRUE AT5G27490.1 integral membrane Yip1 family protein similar to integral membrane Yip1 family protein [Arabidopsis thaliana] (TAIR:AT3G05280.1); similar to hypothetical protein DDBDRAFT_0204543 [Dictyostelium discoideum AX4] (GB:XP_640517.1); similar to Os01g0610500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043545.1); similar to Os05g0455800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055726.1); contains InterPro domain Yip1 domain; (InterPro:IPR006977) 0.174002077719257 1.01581868372116 0.332381139918243 1 0.544334297431033 7.45424629003285 0.174002077719257 0.246904608757976 AT5G29070_at 1.41450134085828 1.42664829803862 1.87765818592658 1.37245849718149 1.53612304815057 1.77478977256690 1.54029639870856 1.70875483541183 1.74999879080588 1.66463271004376 1.71761912174554 1.21475268457801 1.49605616227294 1.48969847943881 1.42373354919758 1.52403926076593 1.74447315721578 1.54299448273892 1.43572946261098 0.234659225431797 0.225136816838903 0.223344744446431 0.227766144085796 0.221792420006704 0.218595504768442 0.218595504768442 0.218595504768442 0.219546169787670 0.229301046032832 0.224910580185997 0.218595504768442 0.225953956938919 0.228552699327639 0.224349383300936 0.218595504768442 0.218595504768442 0.226172302931571 0.232349626043723 5 0|5 /|- 11132323 11132968 11132737.8 11132179 11133520 - gene protein_coding_gene TRUE TRUE AT5G29070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G06479.1) -0.102346402264769 -1.01575253914835 0.3324112137018 1 0.544272426615287 3.14938272213755 -0.102346402264769 0.101013287204136 AT5G14240_at 7.34840537666603 7.79662649321782 8.17357556676042 8.37478634273752 8.95608993756754 8.63273021075197 7.18452618392405 7.22586818927852 7.50949425894693 6.89416728235298 8.4901657354836 8.28827277811865 7.99154275000016 8.36020980801363 8.16773098223856 7.95873133830607 8.15563352434275 8.23066773787623 7.39793458613132 0.158570094237724 0.167626123310055 0.163268310287418 0.163793033120651 0.165920535010623 0.168601742146735 0.165057552899262 0.171649949551337 0.180850901094930 0.167386270960008 0.159411500972987 0.160813652221307 0.166911824018750 0.161679422516702 0.158330150115399 0.162790942091600 0.177344739544274 0.167123288844890 0.163531178569955 5 5|0 -|/ 4596318 4597334 4596770.8 4595931 4597663 - gene protein_coding_gene TRUE TRUE AT5G14240.1 similar to Os01g0184800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042236.1); similar to phosducin-like 3 [Homo sapiens] (GB:NP_076970.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Phosducin; (InterPro:IPR001200); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.102704532108985 1.01538287975275 0.332579322893127 1 0.543926711774267 15.6978600580836 0.102704532108985 0.10203749987609 AT5G38030_at 1.23099744594072 1.56476022046280 1.64648466931467 1.88755229671044 1.12645487649226 1.3583990267757 1.43575143776756 1.41591844155222 1.66396014949974 1.58060326200371 1.47690855723802 1.61732302210349 1.57764204877139 1.60363971673645 1.16156891725563 1.53173281572869 1.67262901198957 1.81877866817179 1.63492944095272 0.182467928561361 0.187562166998095 0.186511139314533 0.186212503337434 0.187482688496402 0.182467928561361 0.183465337564239 0.182467928561361 0.182467928561361 0.183886959540399 0.182467928561361 0.186893898058712 0.191460455100592 0.186376253102044 0.187163572347621 0.183305627090014 0.185060422755447 0.191915527372245 0.188669359460408 5 5|0 -|/ 15188925 15189516 15189286.8 15188476 15192599 - gene protein_coding_gene TRUE TRUE AT5G38030.1 MATE efflux family protein similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT3G26590.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G12950.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G23300.1); similar to integral membrane protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87151.1); similar to Os08g0550200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062445.1); similar to putative anthocyanin permease [Lycopersicon esculentum] (GB:AAQ55183.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) -0.0953881586181336 -1.01524683738226 0.332641206427364 1 0.543799507120166 3.05030253299443 -0.0953881586181336 0.0818500313881027 AT5G07720_at 2.11999002787987 1.81963080822424 1.94609691099182 1.95430388513593 1.74537289713364 1.41751678583054 2.51323178287388 2.72757996152795 1.82631473709323 2.02554935389402 3.14644349050836 3.54879710281145 2.30352288705093 2.70794314234037 3.63150287772254 2.85083152424806 2.15075455015708 2.78988561682406 2.48253227787482 0.234422948312851 0.233802177000143 0.237433813189702 0.234617883465191 0.241138767599779 0.247221087727867 0.238260801761843 0.232157220239663 0.234229641089078 0.23541013547051 0.242004849249262 0.241802022595831 0.23868726159739 0.244833894145958 0.233966686221330 0.237637883547022 0.251529772875874 0.244908224527166 0.232180105160142 5 5 + 2456559 2457094 2456789.545 2455635 2457317 + gene protein_coding_gene TRUE TRUE AT5G07720.1 galactosyl transferase GMA12/MNN10 family protein Identical to Putative glycosyltransferase 3 (EC 2.4.-.-) (AtGT3) (GT3) [Arabidopsis Thaliana] (GB:Q9LF80); similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT1G74380.1); similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT1G18690.1); similar to putative glycosyltransferase [Nicotiana benthamiana] (GB:CAI11458.1); similar to putative glycosyltransferase [Solanum tuberosum] (GB:CAI11457.1); similar to putative glycosyltransferase [Lotus japonicus] (GB:CAI11456.1); contains InterPro domain Galactosyl transferase; (InterPro:IPR008630) -0.0965120816764163 -1.01427359756567 0.333084166571037 1 0.542889894028089 4.53180318507234 -0.0965120816764163 0.0854332485939356 AT5G66130_at 3.32212289937959 3.61848169812976 3.94083596571535 4.37722713244772 4.01573178493226 3.85113571369254 3.57801157205209 3.8222636827972 2.47602693195615 3.6609528571819 3.29127515575265 3.33933519147037 3.88034513003156 4.00169101052923 3.57819393784192 3.81944330435132 3.82189681903438 3.80223849750393 3.15338589765551 0.192609870084669 0.193171344586803 0.192680849381324 0.198737469936033 0.186375908886856 0.193614231118418 0.185835113595462 0.193737540224323 0.200375328214937 0.189287994509648 0.187761254090244 0.190531879852353 0.185835113595462 0.19248572519875 0.191503253193082 0.188225634900815 0.187147832863702 0.198345864964584 0.195118001856178 5 5 + 26453389 26454229 26453791 26451290 26454448 + gene protein_coding_gene TRUE TRUE AT5G66130.1 ATRAD17 (RADIATION SENSITIVE) Encodes a homolog to yeast RAD17. Mutant has increased sensitivity to MMS and increased telomere lengths. Identical to Cell cycle checkpoint protein RAD17 (AtRAD17) (Radiation sensitive 17) (RAD17) [Arabidopsis Thaliana] (GB:Q9MBA3); similar to nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT1G77620.1); similar to hypothetical protein MtrDRAFT_AC148217g17v1 [Medicago truncatula] (GB:ABE88164.1); contains InterPro domain Replication factor C conserved region; (InterPro:IPR000862); contains InterPro domain Checkpoint protein Rad24; (InterPro:IPR004582) -0.103532991529528 -1.01388223515948 0.333262414185371 1 0.542524316419323 7.21002177768278 -0.103532991529528 0.104553771615940 AT5G64040_at 13.4270297406209 13.5487584424626 13.6368358947105 13.6019831403522 13.6735047750948 13.5422529938451 13.8583306489837 13.8113834204033 13.9673905188801 13.9407011219721 14.7214040427712 14.7287409425169 14.4415739397816 14.4119965038105 14.6035811735343 14.4056414664304 14.2681875525886 14.6377612765378 13.7705396335425 0.0613930375380525 0.059924965927353 0.059924965927353 0.0607898547643137 0.059924965927353 0.0653597183545161 0.0620453357833839 0.0624221927549308 0.0634917128888573 0.0618930202569797 0.0613398178178741 0.059924965927353 0.059924965927353 0.0641658621886272 0.0620911515148594 0.0599551677716132 0.0656837311885989 0.059924965927353 0.065696784300611 5 5 - 25646137 25646609 25646386.273 25645814 25646841 - gene protein_coding_gene TRUE TRUE AT5G64040.1|AT5G64040.2 PSAN (photosystem I reaction center subunit PSI-N); calmodulin binding Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Identical to Photosystem I reaction center subunit N, chloroplast precursor (PSI- N) (PSAN) [Arabidopsis Thaliana] (GB:P49107); similar to Photosystem I reaction centre subunit N [Medicago truncatula] (GB:ABE83768.1); contains InterPro domain Photosystem I reaction centre subunit N; (InterPro:IPR008796) -0.0828958064041956 -1.01299772870291 0.333665526274998 1 0.54169850613292 27.8476288589148 -0.0828958064041956 0.0325893056831951 AT5G37280_at 1.39027736563179 1.52974201614703 1.28599812661881 1.47377588574961 1.25064201030467 1.46992151748833 1.12187579287934 1.41100367535864 1.02948973211997 1.54345379039084 0.876818656038003 0.960960464338188 1.65867176792991 1.39628262865486 1.57612386277925 0.869315459857267 1.61752375992873 1.59575735867646 1.42043066019583 0.196887493751941 0.213413833718003 0.205876116435677 0.201968002860194 0.197407295363971 0.196887493751941 0.203039459006282 0.198084785710037 0.197703922213581 0.199506989110895 0.202076160824334 0.210737636343556 0.200304019877163 0.202716910465934 0.200322491656759 0.196887493751941 0.20322281910609 0.197792389927156 0.197375206384486 5 5 - 14778540 14779068 14778820.455 14778505 14779155 - gene protein_coding_gene TRUE TRUE AT5G37280.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G37200.1); similar to C3HC4 type (RING finger) Zinc finger containing protein [Brassica oleracea] (GB:ABD65029.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0927246602945894 -1.01139499731796 0.334396886550291 1 0.540203619621883 2.69168278494438 -0.0927246602945894 0.0747125928567576 AT5G26280_at 1.20861883898507 1.33259463640836 1.28848311227561 1.432672326754 1.26054146158586 1.23628396568023 1.01502014178413 1.00711208156979 1.47684064209197 1.67053037905724 1.44705429630533 1.00210180877245 1.47264856833294 1.40841516372330 1.48366145480485 1.42007472573252 1.18670581946558 1.47917715041879 1.39546432825652 0.172273384574458 0.181274005963159 0.176128056179171 0.173976860556635 0.175742413936392 0.176087772028133 0.170872008901130 0.177058479849548 0.174078768714213 0.170872008901130 0.170872008901130 0.173328893995935 0.173580064461127 0.176676223208401 0.175919331563724 0.170872008901130 0.171372208135883 0.175750048482434 0.170872008901130 5 5 + 9209635 9210368 9209892.727 9208714 9210575 + gene protein_coding_gene TRUE TRUE AT5G26280.1|AT5G26280.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G26300.1); similar to Os12g0489100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066793.1); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94399.1); similar to ubiquitin-specific protease 12, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA98280.2); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322)|similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G26300.1); similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G26260.1); similar to MATH [Medicago truncatula] (GB:ABE81785.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) -0.0828104511836772 -1.01080366003509 0.334667025303814 1 0.539652556633511 2.66104498225357 -0.0828104511836772 0.0332028233452926 AT5G17820_at 1.61424860383767 1.48492077696002 1.40612057950462 1.62165385682355 1.19319465440868 1.67484605832400 1.53743031193789 1.16639203827518 1.89031611302652 1.89296712774485 1.74978403585077 1.79807421011082 1.5938293530653 1.72922648381742 2.1179933821316 1.68711669294491 2.43004419293791 2.08727409974091 1.88201541331549 0.218406626951536 0.218264212763625 0.220122905457719 0.221892444854623 0.225005637972552 0.223815799917277 0.224857427911028 0.218433019989559 0.221918865321825 0.222259457167911 0.224586315065650 0.219602477364279 0.220683245192016 0.222432587694158 0.227667916353205 0.218264212763625 0.218264212763625 0.218264212763625 0.225282119501647 5 5 - 5888294 5889198 5888767.909 5887908 5890195 - gene protein_coding_gene TRUE TRUE AT5G17820.1 peroxidase 57 (PER57) (P57) (PRXR10) Identical to Peroxidase 57 precursor (EC 1.11.1.7) (Atperox P57) (PRXR10) (ATP13a) (PER57) [Arabidopsis Thaliana] (GB:Q43729;GB:Q84WN8); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT3G03670.1); similar to cationic peroxidase [Stylosanthes humilis] (GB:AAB67737.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.106926574958318 -1.01056898767544 0.334774274623636 1 0.539433939528581 3.35615120551924 -0.106926574958318 0.113853366408161 AT5G53940_at 7.75925028407045 7.83282370658397 8.33841017192464 8.38681312065358 8.80597276966233 8.35269615677874 8.08831165499264 7.7356074137031 7.23776160290711 7.65506393614564 8.30943636474026 8.59446502140741 8.2438886583836 8.36021272505455 8.8808965965998 8.36484304551824 8.33682700433416 8.09964072624468 7.28966118656349 0.160860989047177 0.153187428037844 0.163734445154997 0.155594457847894 0.15545905940278 0.158569422295410 0.155824768790059 0.159458586367964 0.187119380300982 0.167278988114036 0.152017496028172 0.151943796527137 0.164148746954602 0.175815489835721 0.152640887069495 0.154977179824243 0.163482933742615 0.166309865662471 0.165880526163204 5 5|0 -|/ 21914402 21915788 21914913.889 21914221 21915836 - gene protein_coding_gene TRUE TRUE AT5G53940.1 yippee family protein Identical to Protein yippee-like At5g53940 [Arabidopsis Thaliana] (GB:Q9FN32); similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT2G40110.1); similar to Protein yippee-like (GB:P59234); contains InterPro domain Yippee-like protein; (InterPro:IPR004910) -0.101525248910872 -1.00934817285192 0.335332617721297 1 0.538297311359705 16.0589549146249 -0.101525248910872 0.100552930077375 AT5G02620_at 8.08714128477756 8.33325122737239 8.88880996540974 9.15849321742733 9.01558952162725 8.69155297617607 7.88890758167508 8.0484267708787 7.3066891973049 7.33768756071123 8.44243453036776 8.51143952365054 8.62042251662748 8.55315242917414 7.99576683268004 8.60868523410214 8.52821099972205 8.38859362219892 7.3849877329481 0.189748078366398 0.184906450817812 0.193217394805702 0.188692262047083 0.195426837293057 0.193518997266888 0.191951893811505 0.184862491615647 0.209123506032134 0.190739441815024 0.182830673483783 0.182432971016620 0.198083063612264 0.180331928892780 0.191905920983678 0.188148885907999 0.198428216813478 0.207301298859027 0.205992381096536 5 5 + 591009 591465 591198.364 589525 591675 + gene protein_coding_gene TRUE TRUE AT5G02620.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G07710.1); similar to Ankyrin [Medicago truncatula] (GB:ABE80012.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.0971918977662658 1.00886385362018 0.335554312898435 1 0.537846699147093 16.4136264221947 0.0971918977662658 0.0888741791147003 AT5G45480_at 8.22748201143776 8.20348186606423 8.51085908529422 8.72503458373262 7.99711435863831 8.20563227624599 6.21126812297046 6.89234060944175 7.79574408502205 6.60705197606439 8.14962998181721 8.32045978830797 7.68852890886901 8.19762112947323 7.95491414266892 7.32111564617832 7.39855402211783 7.93433640854658 7.06602844178468 0.171133038255838 0.165388593072455 0.168851494371279 0.166231715191495 0.167060616223844 0.165567650740826 0.196362642815666 0.178873142623042 0.174685238887579 0.171625846282387 0.173715533921989 0.175458865906697 0.170724423999482 0.173061046463153 0.173310957457680 0.168939588955343 0.170007157059320 0.173580624123628 0.179206502527004 5 5 - 18443644 18444094 18443876.818 18443331 18446317 - gene protein_coding_gene TRUE TRUE AT5G45480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45470.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45530.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45540.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87859.1); similar to Os01g0953100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045426.1); contains InterPro domain Protein of unknown function DUF594; (InterPro:IPR007658) -0.112882579053362 -1.00704872241064 0.336386144471322 1 0.536159456169782 15.3851115331220 -0.112882579053362 0.128781811971603 AT5G24350_at 4.96354541545993 5.33927314927619 6.25808131796742 6.40777851121219 7.58549483799606 5.78658000401344 5.25526691948201 5.17888894090055 4.37833677894037 5.43332352391593 6.02011082766643 6.75228375393321 6.56799294294546 6.21091503114287 5.61057720434494 6.53966316932214 6.1123166573445 6.6068735728942 5.72209397482333 0.258749145447409 0.248828924548787 0.262567013411397 0.249412438701363 0.254834873031336 0.26445453085629 0.251666495175989 0.258311022072174 0.278099776656518 0.252845885329181 0.260173411131995 0.249384153766656 0.247759299689136 0.260169833326827 0.263867304724768 0.247447444434290 0.26606157783692 0.259259307827962 0.258962166516507 5 5 + 8310170 8310716 8310445.182 8301108 8310898 + gene protein_coding_gene TRUE TRUE AT5G24350.1 similar to hypothetical protein [Brachypodium sylvaticum] (GB:CAJ26383.1); similar to Os12g0233600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066451.1); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.213137727063478 1.00641261882608 0.336678015316164 1 0.535568753909877 11.5871185057930 0.213137727063478 0.319355432718945 AT5G29020_at 1.50837470344295 1.57481028354417 1.68215106346351 1.62251239561447 1.13920151606579 1.74635619850917 1.56492293875346 1.64278034287079 1.83286549935730 1.32569000822108 1.50960035362772 1.25953501269183 1.32925066237617 2.35772604231586 1.59359706849205 1.69404052850801 1.80929271266304 1.68102728928797 1.66338051091928 0.204528384145076 0.201272061542461 0.197224537733421 0.204296592178576 0.197811067662830 0.197083546956441 0.205002155205413 0.210044496607888 0.203436118455705 0.195262011028364 0.197938665135793 0.197756953260813 0.199257483102079 0.199693314866561 0.199913485096558 0.201025706365659 0.204402449842651 0.211647007563730 0.195262011028364 5 5|0 +|/ 11045962 11046449 11046200.778 11041955 11046506 + gene protein_coding_gene TRUE TRUE AT5G29020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60930.1); similar to hypothetical protein TTHERM_00155290 [Tetrahymena thermophila SB210] (GB:XP_001009657.1) -0.103689411165229 -1.00582114725206 0.33694957464594 1 0.535019769989429 3.19092403773865 -0.103689411165229 0.107052045961962 AT5G45250_at 7.84742962170855 7.81369868831028 8.43900075877435 8.4200154321041 8.91006444118816 8.30301278064084 6.53504662456319 6.75487466054136 7.8309321391994 7.78909265265248 8.39326357829776 8.31039039116304 8.21914005479043 8.2292401463285 7.85921165441749 8.44858048961142 8.12332161653446 8.0176508557648 7.90477858173958 0.152452614099125 0.154660259790715 0.158394058687684 0.157727188612785 0.152698509718509 0.157304918007181 0.164971910585735 0.163682551148142 0.160115358280614 0.155605534087757 0.157785723964837 0.153553209790118 0.152452614099125 0.157237379097295 0.162189297434839 0.159167408117281 0.169727597305632 0.164247483120123 0.161850625492994 5 5 - 18339152 18339689 18339506.364 18339141 18343249 - gene protein_coding_gene TRUE TRUE AT5G45250.1 RPS4 (RESISTANT TO P. SYRINGAE 4) RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51570.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45060.1); similar to TIR-NBS-LRR type disease resistance protein [Populus trichocarpa] (GB:ABF81419.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.105313126172304 -1.00270060123401 0.338384968170142 1 0.532127726260079 15.8987433624258 -0.105313126172304 0.111929624448752 AT5G33300_at 1.87394625705407 2.14588068362713 2.36329217826670 2.80346832269983 2.03238159061819 2.44087335807803 2.13871268842336 2.07467748090035 2.47699993120840 2.54960695770087 2.36013322479254 2.94371209237573 2.42476429276215 2.69439508967893 3.15797833486169 2.5807605492043 2.67249805615086 2.73082076561579 1.99084819478807 0.182715046442913 0.18165243737398 0.17919147010887 0.174038843513528 0.179773653914016 0.181481294261716 0.193560967877492 0.17424406395491 0.183622696880889 0.175922731738362 0.179803870455481 0.178835549865688 0.186170083586697 0.188554274965298 0.177195636565669 0.177143718013645 0.180793575709882 0.181404364769859 0.176892107962689 5 0|5 /|- 12580067 12580557 12580274.5 12579660 12582987 - gene protein_coding_gene TRUE TRUE AT5G33300.1 chromosome-associated kinesin-related similar to chromosome-associated kinesin, putative [Arabidopsis thaliana] (TAIR:AT5G60930.1); similar to Os09g0114500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062580.1); similar to KIF4-like [Oryza sativa (japonica cultivar-group)] (GB:BAD34075.1); similar to putative KIF4 [Oryza sativa (japonica cultivar-group)] (GB:BAD16508.1); contains domain KINESIN HEAVY CHAIN (PTHR16012); contains domain gb def: At5g33300 (PTHR16012:SF3) 0.106369291236179 1.00235080186486 0.338546149624756 1 0.531803996347565 4.75154631758147 0.106369291236179 0.114617776572187 AT5G43320_at 9.46652130983856 9.50922422639277 10.3999470456277 10.2680426644873 10.3808008908263 10.0878985256918 9.49803291922862 9.53412192872737 9.54304243007615 9.63632971365604 10.3446068997329 10.2513812194315 10.3585916797829 10.364230426376 10.0204750979833 10.5069782643322 10.3851147063946 10.3231966016000 9.56529877204203 0.0829902344122087 0.0764704226707004 0.0760160631393595 0.0786320720670736 0.0754388710788832 0.0776113293211902 0.079942874388608 0.0777364173951284 0.0779594593193407 0.0818559628758466 0.0773033020320027 0.0769098872558486 0.0759511498008873 0.0788411814440091 0.0785074070440397 0.0769718637681056 0.0792074525542252 0.0754388710788832 0.0785281690617246 5 5|0 -|/ 17403295 17404332 17403673.6 17403095 17406629 - gene protein_coding_gene TRUE TRUE AT5G43320.1 CKL8 (Casein Kinase I-like 8); casein kinase I/ kinase similar to CKI1 (CASEIN KINASE I), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT4G14340.1); similar to CKL10 (Casein Kinase I-like 10), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT3G23340.1); similar to CKL13 (CASEIN KINASE LIKE 13), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT1G04440.1); similar to Os02g0810400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048470.1); similar to Os02g0622100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047465.1); similar to putative casein kinase I [Oryza sativa (japonica cultivar-group)] (GB:CAD32377.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0867235561613893 1.00148626807981 0.338944754121871 1 0.531004287726196 19.8435131057920 0.0867235561613893 0.0564265734387265 AT5G06020_at 1.20398496939878 1.23317755929010 1.51186352147988 1.75303821315166 1.26645236781224 1.59991307438985 1.43540954833940 1.20840296519340 1.11140796892061 1.63392651940794 1.55142532941324 1.47316650826820 1.67772677409610 1.42166508549672 1.26454631050316 1.59949908896037 1.86044996724681 1.49693327748658 1.51509068979087 0.214518840238021 0.223978222708035 0.213210743079288 0.212832718873965 0.212832718873965 0.217420928200380 0.216387883405760 0.212832718873965 0.212832718873965 0.220302499139436 0.215223645118820 0.233201462988935 0.220613840105913 0.214539373745838 0.218052764994047 0.212832718873965 0.230398523521344 0.213062386082393 0.212832718873965 5 5 + 1811958 1812351 1812113.222 1811939 1812394 + gene protein_coding_gene TRUE TRUE AT5G06020.1 self-incompatibility protein-related similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT5G06030.1); similar to self-incompatibility [Papaver rhoeas] (GB:CAA06688.1); contains InterPro domain Plant self-incompatibility S1; (InterPro:IPR010264) 0.093768591794179 0.999264165930464 0.339970867021256 1 0.528951381925774 2.88318941174376 0.093768591794179 0.0814911951172613 AT5G32590_at 1.52649041326178 1.07166018265674 1.29038973647637 1.34405118697702 1.46327729533765 1.60568106508525 1.27511939870409 1.51525538041355 1.72365888106773 1.76463283029030 1.86973081282410 1.28906014356106 1.62670367855391 1.66408763489645 1.90638981930698 1.30964078085471 1.31049761867983 1.6855580452207 1.45248051478273 0.203435052849406 0.205275151146075 0.20425953360386 0.207045538064231 0.203797104915587 0.206399703466316 0.203435052849406 0.203435052849406 0.211238971675246 0.203435052849406 0.208845286701955 0.207734308570382 0.206980592747637 0.205293487881180 0.206252095068183 0.203435052849406 0.211583746240527 0.205738700330876 0.204327955030694 5 5 - 12238857 12239483 12239190.4 12238819 12241552 - gene protein_coding_gene TRUE TRUE AT5G32590.1 myosin heavy chain-related similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT3G30230.1); similar to hypothetical protein 26.t00052 [Brassica oleracea] (GB:ABD65035.1) -0.0976396620002848 -0.999023775775455 0.340082010095930 1 0.528729518223997 3.00130690342279 -0.0976396620002848 0.0928215617469878 AT5G40740_at 3.60499355153396 3.71006061815773 3.10178278439822 3.29829749641539 5.03372245690312 4.32554782339709 3.60197922868469 3.28915814601717 3.41413482395793 3.53800987492144 3.70369292284686 4.8560519690036 4.31634407919237 4.69475533000472 4.34278429965213 4.22787255182752 3.9146523400304 4.14574064193622 3.55852121206068 0.238575555474327 0.228727276894935 0.234140761587565 0.235816398053407 0.233254727732704 0.235048231563058 0.228727276894935 0.228727276894935 0.258303363332939 0.236845512586875 0.245108651481922 0.228727276894935 0.228794329265176 0.237703379249538 0.241692459525337 0.230335002087434 0.228727276894935 0.232138557895572 0.231739685953704 5 5|0 -|/ 16319730 16320400 16320037.9 16319142 16323641 - gene protein_coding_gene TRUE TRUE AT5G40740.1 similar to Os02g0329300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046716.1); similar to serine-threonine rich antigen [Staphylococcus aureus] (GB:AAL58470.1) -0.116557683429893 -0.9978985620343 0.340602601512901 1 0.527691600875452 7.63508879841763 -0.116557683429893 0.139416499903898 AT5G13720_at 9.36797510666507 9.62843175116326 10.2972612083569 10.3713313738464 10.1007457034799 10.0998567036473 9.275413408392 9.48235137532576 9.26475305339164 9.19541214904878 10.1327667440343 9.6908499994516 10.1253392867423 9.84931423325648 9.7369301358317 10.1384703669330 9.8531848113405 10.105102832863 9.04126719700928 0.122575973633341 0.116066068566189 0.121499793434571 0.122541267216227 0.119062290832659 0.122018167109353 0.116846251743231 0.121562863707637 0.146169738690563 0.126421370438767 0.120066456088452 0.124838968217860 0.118394920470990 0.129680550701269 0.124384691520693 0.117843162574601 0.128004006042924 0.119478500290671 0.126872254888893 5 5 + 4428153 4428995 4428645.909 4427786 4429136 + gene protein_coding_gene TRUE TRUE AT5G13720.1 structural constituent of ribosome similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19390.1); similar to Os07g0656700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060506.1); similar to Os07g0656600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060505.1); similar to putative integral membrane protein [Methanococcus maripaludis S2] (GB:NP_987845.1); contains InterPro domain Uncharacterized protein UPF0114; (InterPro:IPR005134); contains InterPro domain Ribosomal protein L14b/L23e; (InterPro:IPR000218) 0.0869654952477419 0.996908440402496 0.341061175143129 1 0.526779083282585 19.3884902960878 0.0869654952477419 0.0589779245406736 AT5G16270_at 8.72317537093028 8.7064329685018 9.63256631497574 9.498216489985 9.74412732833861 9.50348429568628 8.91106223375059 8.78640575685298 8.90240905878542 8.65439810187754 9.35131152885286 9.45504718491614 9.4000634833165 9.38846654886416 9.01348181704351 9.39432668014517 9.32651381163733 9.31937939071427 8.83758420127234 0.109592653056534 0.108313136072220 0.104207547019627 0.111017082032085 0.104207547019627 0.107525427631065 0.109412355703305 0.10803265877188 0.110236380181105 0.106740440869490 0.109224821161345 0.107320681269257 0.108920926748612 0.111080483328087 0.109128874216649 0.108736052197405 0.107593217268053 0.112119425703071 0.113811483654439 5 5|0 +|/ 5321257 5322294 5321704.7 5316302 5322699 + gene protein_coding_gene TRUE TRUE AT5G16270.1 ATRAD21.3 (Arabidopsis homolog of RAD21 3) similar to SYN3 (Sister chromatid cohesion 1 protein 3) [Arabidopsis thaliana] (TAIR:AT3G59550.1); similar to cohesin-like protein [Oryza sativa (indica cultivar-group)] (GB:AAP79440.1); contains InterPro domain Rad21/Rec8 like protein, C-terminal; (InterPro:IPR006909); contains InterPro domain Rad21/Rec8 like protein, N-terminal; (InterPro:IPR006910) -0.0853057566007631 -0.996106209676035 0.34143305961335 1 0.52604027157919 18.25278597471 -0.0853057566007631 0.0524268496825798 AT5G48860_at 0.712977814255536 0.652188080806218 0.488696761886744 0.89575965933983 0.73560732510153 0.711667896524108 0.779664929648148 0.724855991924586 0.758696285922519 1.16456229419582 0.69131809517387 0.843780385776017 0.694204098466548 0.542803427432122 0.979672934633917 0.557141900000197 0.362504433892122 0.881952461053877 0.352382675596156 0.197485836943973 0.194410847565550 0.194406751015050 0.194605914011996 0.194406751015050 0.196102207380643 0.199986604682839 0.200482632557403 0.200914964677931 0.206688796434438 0.205254809878463 0.197526115680002 0.195542590336276 0.194529772134103 0.198948230558527 0.195392477803215 0.202887016247634 0.198513010321701 0.203086161244391 5 5 - 19828890 19830030 19829583.727 19828877 19830091 - gene protein_coding_gene TRUE TRUE AT5G48860.1 unknown protein -0.0903556136831899 -0.994582479826976 0.342140223546253 1 0.52463833339862 1.43903695858171 -0.0903556136831899 0.0719734138887826 AT5G28780_at 0.553719172079274 0.607462132055563 0.554427364737412 0.894676532157142 0.554943477994357 0.814944750052195 0.699079212940045 0.240287227977365 1.03745619215521 1.24456392495815 0.89875956788151 0.98918331939632 1.00598993286927 0.949270036218788 0.855212251747122 0.607388662378763 1.11002203402099 0.280495571409702 1.05091562803423 0.185200416250690 0.187379849100929 0.188114643092351 0.185688398295285 0.193704638451075 0.184587137538657 0.193008513471621 0.185177501936659 0.184602472001592 0.194907437833003 0.189086472023622 0.187369947647950 0.187522802408106 0.187522830352634 0.187703963971764 0.183379701069803 0.199309639993689 0.196655966005515 0.185096086925144 5 5 - 10813070 10813495 10813239 10812911 10814177 - gene protein_coding_gene TRUE TRUE AT5G28780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54430.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABB47755.2); similar to putative helicase [Oryza sativa (japonica cultivar-group)] (GB:AAK54292.1); contains InterPro domain Protein of unknown function DUF889, eukaryote; (InterPro:IPR010285) -0.103296647302667 -0.994580055625483 0.342141349474856 1 0.524636104358469 1.58895186060225 -0.103296647302667 0.109003635129883 AT5G49260_at 0.476723780824943 0.618238819480114 0.515508696220091 0.417046056617907 0.41872559754898 0.454415389073161 0.292325886724807 0.201323551339732 0.465187987576626 0.741474007366594 1.04427026466461 0.869815887911689 0.98343941246851 0.430915015484734 0.488256415308882 0.549837813271189 0.264095011912637 0.587063159533465 1.10616687584206 0.198484831534966 0.200996386610929 0.198484831534966 0.200544398001354 0.200281984225591 0.205851542406910 0.209746073409329 0.200654297163973 0.201286811697501 0.206008100511386 0.209969183488416 0.198484831534966 0.198484831534966 0.205549559309209 0.198484831534966 0.215316894512734 0.203457824631544 0.199594106107778 0.198794040263544 5 5 + 19984148 19984510 19984286.091 19984025 19984753 + gene protein_coding_gene TRUE TRUE AT5G49260.1 unknown protein -0.0816299285118774 -0.99432877572329 0.342258072015758 1 0.524405077895011 1.13586576197766 -0.0816299285118774 0.0342965283872836 AT5G05070_at 1.84869325447939 1.74084140073274 1.54279993084202 1.92154395132285 1.39212183833512 1.46514841971151 1.47167775732225 1.57048563877175 1.70056734444946 2.36729338892433 1.96667103392852 1.98885538096238 2.33095911531405 1.80688350135881 2.40555240526928 2.42473922749196 1.92072714901853 2.05073541458113 1.71963027011166 0.221538697121031 0.222097685499026 0.227090723616706 0.228676453089851 0.225947872649464 0.227293106166023 0.223674648166315 0.226989555139440 0.231760821743824 0.221538697121031 0.224727797577423 0.221538697121031 0.225887229548611 0.221538697121031 0.227620211285091 0.222554557915854 0.223170230864001 0.229101039339432 0.235905445621058 5 5 + 1497527 1498413 1498058.1 1496856 1498545 + gene protein_coding_gene TRUE TRUE AT5G05070.1 zinc ion binding similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT2G40990.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE79847.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) -0.0900610107057069 -0.993247468439246 0.342760685422056 1 0.523411468835789 3.63969105959924 -0.0900610107057069 0.0713889680208644 AT5G27080_at 1.31500507015543 0.838803135376837 1.40288013900139 1.62563280113873 1.01055635610096 1.14163061884085 1.13840732280477 0.639218909179932 1.14613054677338 0.961845419130597 1.12165878925771 0.934251052031452 1.21575474159367 1.22417732339118 1.04259255060356 0.82716438920692 1.54983720158553 0.903955624357356 1.03790867810594 0.188449262267572 0.194523383014403 0.192008124100435 0.192866098931574 0.187836290379654 0.187836290379654 0.187836290379654 0.191862267792787 0.207053266069411 0.190712306432765 0.189862022922680 0.190596082807670 0.191631538039389 0.191859827018311 0.190381830165330 0.191646252509865 0.197785878058407 0.190762940770958 0.193036214700222 5 5|0 -|/ 9529620 9530023 9529710.4 9529606 9531084 - gene protein_coding_gene TRUE TRUE AT5G27080.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G26900.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G27570.1); similar to CDC20.1, signal transducer [Arabidopsis thaliana] (TAIR:AT4G33270.1); similar to hypothetical protein [Brassica napus] (GB:CAA11819.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Cdc20/Fizzy; (InterPro:IPR000002) 0.110680870510349 0.992350482077876 0.343178033071277 1 0.522587901367101 2.21454288091156 0.110680870510349 0.127492856284775 AT5G37055_at 4.70971626398339 4.67547187526762 5.57637979143939 5.46269735722285 6.11046323378649 6.22415634708934 3.96093386557452 3.76062580570656 4.21794985530915 4.51841200709225 5.35300037833995 4.75299509893053 4.68955287954116 4.77448417695901 5.13258685604666 5.25486242057921 4.75719123451801 4.76719158330124 4.79585604340554 0.225398035988562 0.230622608371954 0.223332831820633 0.224567774873009 0.238469708357096 0.231571464112502 0.223332831820633 0.231911470341179 0.227732774412894 0.22941637359343 0.224996033749051 0.223332831820633 0.227842396034571 0.223332831820633 0.228714915497722 0.233413526157783 0.2296964667757 0.225812612690536 0.227446981126029 5 5|0 -|/ 14658908 14659591 14659218.444 14658781 14659670 - gene protein_coding_gene TRUE TRUE AT5G37055.1 zinc finger (HIT type) family protein similar to zinc finger protein [Nicotiana benthamiana] (GB:AAW83129.1); contains InterPro domain Zinc finger, HIT-type; (InterPro:IPR007529) 0.0833324984901318 0.992110101646123 0.343289939924612 1 0.522367299468414 9.78304175774008 0.0833324984901318 0.0448428068712504 AT5G15700_at 3.39313834965549 3.92912186937908 4.38626578928312 4.30978326242451 3.85366368715558 3.81571682612623 3.42174454970661 3.77009847111708 2.67665385707823 2.92181958183961 2.80872155828240 3.56837727361875 3.1562544846985 2.78258048696952 3.22015187872244 3.23572190866964 3.37335570194625 3.47040616732401 2.61564509906020 0.266219234484815 0.277536106521108 0.262502619137815 0.273073309426054 0.262137873027158 0.274162190525982 0.273650406384487 0.273942159254445 0.278542796801734 0.274082177788230 0.271302778845997 0.26499887648831 0.268255555607423 0.272948029813861 0.262580887296526 0.263425237426745 0.281465062852131 0.274937808058963 0.265603894726325 5 5|0 -|/ 5115799 5116605 5116197.7 5115303 5121843 - gene protein_coding_gene TRUE TRUE AT5G15700.1 DNA-directed RNA polymerase (RPOT2) Identical to DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (EC 2.7.7.6) (RPOT2) [Arabidopsis Thaliana] (GB:Q9LFV6;GB:O23644); similar to PDE319/SCA3 (PIGMENT DEFECTIVE 319, SCABRA 3), DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT2G24120.1); similar to DNA-directed RNA polymerase, mitochondrial (RPOMT) [Arabidopsis thaliana] (TAIR:AT1G68990.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96891.1); similar to DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor (T7 bacteriophage-type single subunit RNA polymerase 2) (NsRpoT-B) (GB:Q8VWF8); similar to DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor (T7 bacteriophage-type single subunit RNA polymerase 2B) (NictaRpoT2-tom) (GB:Q8L6J3); contains InterPro domain DNA-directed RNA polymerase, bacteriophage type; (InterPro:IPR002092) -0.103915299437887 -0.990620618899381 0.343983950577108 1 0.521001345074825 6.8299344482001 -0.103915299437887 0.111605947250328 AT5G26790_at 2.61605376883181 2.03320315410871 2.62799453339625 2.67376039411268 1.77668013441493 2.54901899243296 2.04312340772206 2.42413018928677 2.70104938986604 2.52717387601400 3.40986014755374 2.61239840121724 2.53924078622516 3.01799249343746 2.88329629522118 2.41892614577629 2.6131184657819 2.41476262086070 2.50650367020628 0.217664078087318 0.210228017599841 0.209890320466971 0.211400707046494 0.222714204011929 0.214927358949347 0.221888747478946 0.209758538446617 0.217489205627279 0.218383958875916 0.219416226323460 0.215430279002154 0.218900188164053 0.216525964009875 0.212953128320478 0.209963935459556 0.209758538446617 0.220230603663903 0.209758538446617 5 5 + 9423184 9423282 9423231.364 9423095 9423614 + gene protein_coding_gene TRUE TRUE AT5G26790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06475.1) -0.134909577298438 -0.990224984882054 0.34416846509217 1 0.520638804372854 5.00146643755726 -0.134909577298438 0.1801334326861 AT5G50180_at 8.08539646265438 8.01441085829006 8.5893458189246 8.2311563600424 9.22621149125112 8.97248041077167 8.05089961153999 7.73173580425662 7.31219068275989 7.65374550712065 9.12665355573105 9.06512870871427 8.40473993659575 8.5712340782877 8.74841164978753 8.81871452439676 8.69917087644788 8.48013951706089 7.76813619400937 0.153936670741652 0.154156764692898 0.153176608486346 0.157305155898036 0.150952666450668 0.157204023515517 0.155149007940054 0.160099800356342 0.173963239231179 0.159359150462392 0.153982382373658 0.154792498344900 0.166116225853578 0.164224728581851 0.161498632378230 0.156591196613252 0.155316756674882 0.162798828010401 0.165300406308633 5 0|5 /|+ 20449563 20450075 20449872 20447822 20450326 + gene protein_coding_gene TRUE TRUE AT5G50180.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G40540.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06440.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0973479337370642 0.989094218976246 0.344696227355855 1 0.519603275640738 16.5213537191369 0.0973479337370642 0.094720145334562 AT5G28050_at 9.73047954237464 9.86295846564478 10.1924932377781 10.3563304480285 10.2172616633299 10.2976278440465 9.88359923667734 9.899040320304 10.0118068976707 9.6270729557069 10.5662524406801 10.5347468714895 10.3988466996922 10.4131484696442 10.39780495193 10.4042258247998 10.2325902018126 10.6435723279419 9.5086014844793 0.0886926654970487 0.0842455624124592 0.0841676108218865 0.0835440872288706 0.0825766884465026 0.0843429584240515 0.0896489812795798 0.0836708141974962 0.0894652619095982 0.0852761041916745 0.0856350433170359 0.0839848263619777 0.0854446685477338 0.0863756591797798 0.0848818741369124 0.0825734216906828 0.0875254607191847 0.0878033929247391 0.0845920121802534 5 5|0 -|/ 10044254 10045075 10044594.6 10043918 10045979 - gene protein_coding_gene TRUE TRUE AT5G28050.1|AT5G28050.2 cytidine/deoxycytidylate deaminase family protein|hydrolase/ zinc ion binding similar to cytidine/deoxycytidylate deaminase family protein [Arabidopsis thaliana] (TAIR:AT3G05300.1); similar to deoxycytidine deaminase [Brassica oleracea] (GB:AAL67435.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125) -0.0819904149064714 -0.988954964737368 0.344761262392823 1 0.519475816807546 20.1373366378318 -0.0819904149064714 0.039115884732891 AT5G54400_at 1.41858968802835 1.45144558833117 1.95716864830824 1.68699756399893 1.65875129743867 1.63916041035048 1.66897503170908 1.72217464313699 1.6643822763474 1.43220843404748 1.95842575783924 1.86756865632007 1.78748984741660 1.76303160219478 2.10098973738655 1.61176537326609 2.25657787670846 1.73189877347705 1.80396713671956 0.175633387935859 0.176629089195418 0.169649564127763 0.172680753592695 0.170331056442053 0.169850063136254 0.172211197182056 0.169765162973703 0.180241068561139 0.168086368518233 0.17088618589371 0.176847663932411 0.169589800312815 0.171083537443516 0.178618815031404 0.172400224680368 0.181623734954507 0.174342621793953 0.168317803466759 5 5 + 22108250 22109169 22108693.091 22107759 22109352 + gene protein_coding_gene TRUE TRUE AT5G54400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15530.2); similar to conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl] (GB:ZP_00766604.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.083529289783449 0.98645956907557 0.345928192869729 1 0.517194280703413 3.40952672663653 0.083529289783449 0.0481097961559306 AT5G05310_at 4.14880989589048 4.15709602490098 5.09845374835233 5.14779295117319 6.20203811802391 4.90223965005666 3.88949227719215 3.35448314979714 4.03400981207451 3.91851170657486 4.73060170780686 4.68092774688 4.33687191299375 4.90384457720923 4.17731569092521 4.6744373339014 4.71472241796812 4.32864415707903 4.07808186448044 0.248698606445819 0.250309107090171 0.258816872974463 0.245394975646207 0.245619337820057 0.249295854152773 0.245394975646207 0.250340736427585 0.248659154350705 0.245394975646207 0.245394975646207 0.245394975646207 0.255853114939361 0.245394975646207 0.254142908096959 0.25358526481655 0.247982599965196 0.249991798512242 0.247614876161107 5 5|0 +|/ 1572981 1574267 1573806.75 1571233 1574580 + gene protein_coding_gene TRUE TRUE AT5G05310.1|AT5G05310.2|AT5G05310.3 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA96262.1); similar to Os12g0112300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065973.1) 0.166807472529743 0.984780232536046 0.34671512954796 1 0.515661522873711 8.90186163732605 0.166807472529743 0.243399636908079 AT5G24440_at 1.60806038087242 1.8560757845297 2.08811803928908 2.22054722458353 1.54323997787537 1.44013201429920 1.56726642669892 1.45430349032759 1.69178546913310 1.52980503015211 1.96133234902272 1.85443902023176 1.23980386643575 1.81557861907170 1.48403259848622 1.55430437430922 1.57928809900467 1.49709983614016 2.00176412761524 0.220472951544308 0.216614673588567 0.220203932923776 0.215303801820292 0.213510645384513 0.227071753523137 0.213654327378035 0.222830839259395 0.213114713746256 0.228596238116454 0.211768428338227 0.211192649050991 0.214963599144706 0.214576901673051 0.221473300665104 0.208777081005986 0.214265486445891 0.212859827609181 0.210945137959627 5 5|0 -|/ 8345407 8346931 8346345.444 8345405 8347779 - gene protein_coding_gene TRUE TRUE AT5G24440.1 CID13 (CTC-Interacting Domain 13); RNA binding RNA-binding protein, putative. Contains PAM2, PABC binding domain. similar to CID10, RNA binding [Arabidopsis thaliana] (TAIR:AT3G49390.2); similar to RNA-binding protein (GB:AAA86641.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Ataxin-2, C-terminal; (InterPro:IPR009818); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0850093869254813 -0.984575727035593 0.346811049965578 1 0.515475013492726 3.40439444446177 -0.0850093869254813 0.0553885794398558 AT5G63310_at 9.87286053948904 9.95274047811124 10.1295410477928 10.0658287654357 10.2918734965329 10.1666391743028 10.1252939158417 10.3661589110056 10.0818690644685 10.3703776950861 11.1677127536689 11.6215327736596 10.9228628087088 11.0160277971461 11.8416698097444 11.1411446995707 10.8827557371022 11.1991168956964 10.2034825328504 0.091138431990472 0.0872621994275508 0.0921094769754279 0.0901855814697219 0.0925488226389728 0.0947721974319338 0.096220573572671 0.0898796742969754 0.102930433802707 0.0927919844402118 0.0895098519585046 0.0908336100216668 0.0872621994275508 0.0950100495756401 0.0922391201384255 0.0899317270234443 0.0920024298507116 0.0872621994275508 0.0951947680406454 5 5|0 -|/ 25389363 25390586 25389922.889 25389130 25391087 - gene protein_coding_gene TRUE TRUE AT5G63310.1 NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2); ATP binding / nucleoside diphosphate kinase Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning. Identical to Nucleoside diphosphate kinase II, chloroplast precursor (EC 2.7.4.6) (NDK II) (NDP kinase II) (NDPK II) (NDPK Ia) (NDPK2) [Arabidopsis Thaliana] (GB:O64903;GB:O65212;GB:Q9SMX6); similar to NDPK1 (nucleoside diphosphate kinase 1), ATP binding / nucleoside diphosphate kinase [Arabidopsis thaliana] (TAIR:AT4G09320.1); similar to nucloside diphosphate kinase 2 [Brassica rapa] (GB:BAC05487.1); contains InterPro domain Nucleoside diphosphate kinase; (InterPro:IPR001564) -0.0836676436076096 -0.982789863001058 0.347649507339399 1 0.513847651477522 20.8427067111709 -0.0836676436076096 0.050197678764592 AT5G64070_at 8.49437602073784 8.53535644300832 9.30050960938742 9.09451327679646 10.2430413314451 8.6399959462525 9.32338493974566 8.98702379074417 7.03513450274892 7.8742065502151 10.1181190235682 9.63299190198374 9.47775443485547 9.54889840016916 9.58553152515966 9.91291659464097 7.67244157955291 8.73426734265307 8.63385541322627 0.374965720181208 0.330607200290573 0.330607200290573 0.348279042367123 0.330607200290573 0.403348942657382 0.332087136075621 0.330607200290573 0.391834785811653 0.383163826868367 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.330607200290573 0.483122877769124 0.377928412605574 0.330607200290573 5 0 / Inf -Inf NA 25654202 25661672 - gene protein_coding_gene TRUE FALSE AT5G64070.1 phosphatidylinositol 4-kinase (PI4K) similar to phosphatidylinositol 4-kinase, putative [Arabidopsis thaliana] (TAIR:AT5G09350.1); similar to putative phosphatidylinositol 4-kinase [Oryza sativa] (GB:AAF34418.1); similar to Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula] (GB:ABE85023.1); similar to Phosphatidylinositol 4-kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92023.2); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) 0.189414221834014 0.98247723824038 0.347796435575303 1 0.51356302243957 17.6688237976245 0.189414221834014 0.285776459461158 AT5G04630_at 2.44387687062784 2.29348303977149 2.64023026512854 2.43219874821102 2.04949796005045 2.26603793701356 2.19956232376080 2.14992776773019 2.46500518379320 2.37884285029060 2.65211461240720 2.22164597206913 2.22265401485712 2.49239815399488 2.37992191052126 2.52728725496065 2.58279361146572 2.49141138148002 1.82570890132807 0.201309655747388 0.193481166529879 0.194197289824878 0.197027667627906 0.194612286767982 0.19223214479103 0.200053658868337 0.194334398042113 0.198704133626956 0.199276787902987 0.203304805433659 0.196727799148193 0.199113830325886 0.197050410326341 0.197216877991745 0.196130661789237 0.194065907210868 0.192312356911339 0.202163138126892 5 5 + 1331541 1332044 1331842.364 1330579 1332108 + gene protein_coding_gene TRUE TRUE AT5G04630.1 CYP77A9 (cytochrome P450, family 77, subfamily A, polypeptide 9); oxygen binding member of CYP77A similar to CYP77A7 (cytochrome P450, family 77, subfamily A, polypeptide 7, unfertilized embryo sac 9), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10560.1); similar to CYP77A6 (cytochrome P450, family 77, subfamily A, polypeptide 6), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G10570.1); similar to CYP77A4 (cytochrome P450, family 77, subfamily A, polypeptide 4), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G04660.1); similar to Cytochrome P450 77A3 (GB:O48928); similar to Cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) (GB:P37124); similar to Cytochrome P450 77A1 (CYPLXXVIIA1) (P-450EG6) (GB:P37123); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0856129908694148 -0.98206171867275 0.347991792666641 1 0.513184827832122 4.64408386859013 -0.0856129908694148 0.0587490807200078 AT5G37260_at 2.30738098774035 2.1472091953133 2.82239647478508 2.20295725382643 2.28087425006568 2.26572712270852 2.44671459026537 1.79183225374171 1.63338318848457 1.87618910367818 2.27923892224907 2.67155717438873 2.14480106628329 1.94401051082973 2.1923813574171 1.82453622997130 2.30369838448127 1.98179892061297 1.76619389053005 0.170395984718208 0.170741052580419 0.176890124907586 0.170707919366524 0.175130432952465 0.174947081635497 0.173692944658392 0.170395984718208 0.185389146568190 0.171961274685976 0.173254053367727 0.17320205363119 0.175541116123085 0.177903737703883 0.171708090508478 0.173808368379212 0.175896654733117 0.171771825422128 0.170395984718208 5 5 - 14768680 14769144 14768999.5 14768574 14770203 - gene protein_coding_gene TRUE TRUE AT5G37260.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G17300.1); similar to MYB transcription factor MYB173 [Glycine max] (GB:ABH02863.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.123329517658033 0.98154008797468 0.348237151276411 1 0.512710239531698 4.24630729022753 0.123329517658033 0.158461787336799 AT5G66180_at 6.26740596708993 6.13093613245423 7.10867117973734 7.24832688209627 8.52071353411936 7.6145720766706 6.1110514310208 5.1057086747487 5.1851632667737 5.92571281487366 6.33321428178189 6.16601775433725 6.64048734169571 6.81508104494293 5.85842701148927 7.02325946371748 6.85206897655863 6.74569142213004 6.45606559052561 0.225805538824536 0.213334646933113 0.221708166142286 0.224275899557764 0.218953446554976 0.241822874180834 0.215480579696544 0.214760523512962 0.225999666313013 0.211085543774798 0.228525051775127 0.21516712756264 0.209758309260816 0.21977485521476 0.218262171077468 0.211341550167158 0.221460557187759 0.21515043170253 0.209758309260816 5 5 + 26467197 26468102 26467647.8 26466164 26468380 + gene protein_coding_gene TRUE TRUE AT5G66180.1|AT5G66180.2|AT5G66180.3 similar to NOL1/NOP2/sun family protein [Arabidopsis thaliana] (TAIR:AT1G06560.1); similar to hypothetical protein MtrDRAFT_AC148217g15v1 [Medicago truncatula] (GB:ABE88184.1); contains InterPro domain Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; (InterPro:IPR001678)|similar to hypothetical protein MtrDRAFT_AC148217g15v1 [Medicago truncatula] (GB:ABE88184.1); contains domain NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING (PTHR22807); contains domain RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE B (SUN) (PTHR22807:SF12); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335) 0.162627529450800 0.981295793496895 0.348352103025836 1 0.512488047468147 12.9683873028118 0.162627529450800 0.236644525568022 AT5G09340_at 1.86666454899851 1.76846179411194 2.45356228420954 2.31504377981771 1.72772229667419 1.99172761577077 1.78597449596854 1.82296794916733 2.03169233004553 1.87272363992087 1.86721326082237 1.80594623340209 1.83556842874389 1.68561689312392 1.39358826835496 2.16345260811205 1.94532236212322 2.01075822927637 2.09211158747919 0.181979257629363 0.183219352665312 0.184721886754759 0.192052533122483 0.181979257629363 0.184076738713289 0.181979257629363 0.182792943907121 0.182950946606409 0.189777725452804 0.184868497681103 0.189439202866382 0.181979257629363 0.184831853402751 0.186023698091889 0.199908148153654 0.187010960147776 0.181979257629363 0.194448309771720 5 5 - 2896676 2896862 2896757.727 2896676 2896915 - gene protein_coding_gene TRUE TRUE AT5G09340.1 ubiquitin, putative similar to UBQ12 (UBIQUITIN 12) [Arabidopsis thaliana] (TAIR:AT1G55060.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.0845348610355914 -0.980975545856253 0.348502836099163 1 0.512196842800135 3.88515349791151 -0.0845348610355914 0.0546969047626724 AT5G63900_at 1.94641703158931 1.68584443481525 2.34216026771742 2.0525190622796 2.18945872647781 1.93828984358680 2.21943771571559 2.19979969723352 2.84996943442465 2.2331751170991 2.80095869528613 2.56142228939817 2.53984888478272 3.023688222091 2.49242350382087 2.34360480036650 2.91914461981917 3.01688941127684 2.51226870340842 0.192273396501249 0.194051804331738 0.202552693412688 0.195399946668475 0.192092261638436 0.194737817055499 0.192092261638436 0.196112967369509 0.201512411532271 0.192867152109804 0.192826679565965 0.200550622225701 0.203930530331697 0.194506265312742 0.194286963851683 0.203981979742606 0.201073157107449 0.199008092765306 0.205640826600391 5 5 + 25587107 25587517 25587310.273 25585924 25587597 + gene protein_coding_gene TRUE TRUE AT5G63900.1 PHD finger family protein similar to PHD finger transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G58610.1); similar to GCN5-related N-acetyltransferase; Zinc finger, RING-type; Zinc finger, FYVE/PHD-type [Medicago truncatula] (GB:ABE78056.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) -0.091637833357854 -0.980653509350298 0.348654459064071 1 0.511904090149528 4.69376683325986 -0.091637833357854 0.0802909423753145 AT5G53360_at 5.55759133424867 5.72779554869601 6.73635939480721 6.49944316996537 7.88368550192408 6.3718860290987 5.31394616753264 4.82542164243535 5.14643634520196 4.75165499052494 6.23434279155531 5.80176110927563 6.08901421274545 6.0315763125318 4.95900512826542 6.29535579032684 5.52086159261676 5.57396308159998 4.93748651502545 0.276656967646687 0.277482677276301 0.279020844965181 0.267607380238194 0.274528886100424 0.285418071312247 0.267416377287308 0.267416377287308 0.268664431866492 0.278146700911886 0.273417046247809 0.272093833871515 0.270412833316460 0.267416377287308 0.269363743768851 0.267416377287308 0.301097905730168 0.272037332233201 0.267416377287308 5 5 + 21665871 21666457 21666131.818 21665128 21666793 + gene protein_coding_gene TRUE TRUE AT5G53360.1 seven in absentia (SINA) family protein Identical to E3 ubiquitin-protein ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5) (SINAT5) [Arabidopsis Thaliana] (GB:Q8S3N1;GB:Q8GYS3;GB:Q9FK06); similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT4G27880.1); similar to E3 ubiquitin-protein ligase SINAT5 (Seven in absentia homolog 5) (GB:Q8S3N1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain TRAF-type; (InterPro:IPR013322); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 0.184932697088597 0.976905498588626 0.350422652139875 1 0.508502704241183 11.4937299082296 0.184932697088597 0.279540476922684 AT5G67270_at 1.18905283973287 1.53840550884493 1.23275307296378 1.53122923287734 1.39323877888896 1.53815324208950 1.47516729913507 0.981839441659078 1.15780243500503 2.20691127928218 1.83399900687467 2.46447763431963 1.55989775221637 2.04618401102237 2.35952528556489 1.84523693307299 1.89615465355623 2.10840735355328 1.73210768270611 0.202820116985599 0.206599962576522 0.205712710794739 0.205996384179696 0.211824149522509 0.203174491734496 0.203000591467163 0.204720155412431 0.225816147580550 0.212552625683488 0.204481258152621 0.203447496157813 0.211172809194693 0.205952801869534 0.213942798900888 0.204945211405018 0.215148598268767 0.210780326467354 0.209681207083028 5 5|0 -|/ 26857517 26858180 26857906.4 26857298 26859307 - gene protein_coding_gene TRUE TRUE AT5G67270.1 ATEB1C (MICROTUBULE END BINDING PROTEIN 1); microtubule binding encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. similar to ATEB1A (Arabidopsis thaliana Microtubule End Binding Protein EB1A), microtubule binding [Arabidopsis thaliana] (TAIR:AT3G47690.1); similar to Os10g0498900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064972.1); similar to microtubule-associated protein EB1-like protein [Medicago truncatula] (GB:ABE91245.1); similar to Os04g0642100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054046.1); contains InterPro domain EB1; (InterPro:IPR004953); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 0.105555338302189 0.976757905650533 0.35049241506693 1 0.508368980052019 3.21656782424244 0.105555338302189 0.119333442195583 AT5G40180_at 2.66464224065859 2.49236385735055 2.82288307610668 2.76227589725692 3.50635057580037 3.46806539094806 2.49222942496136 2.24407515176177 2.56889341623180 2.83374544137578 3.03033116246412 2.56377042649272 2.88211911635829 3.15995885610707 2.2561468423476 2.44258280278121 2.87197049163644 2.65359155836005 2.23949837244076 0.188942608147908 0.194345047247094 0.182386622561386 0.190221168173906 0.200866453047228 0.189521853008489 0.182386622561386 0.188014955162193 0.197968192206263 0.183546548194582 0.184236077181522 0.182386622561386 0.186420525534394 0.184985803878886 0.188341619458596 0.182386622561386 0.186407961072580 0.192199857103031 0.186527950899012 5 5|0 +|/ 16085155 16085409 16085320.2 16085151 16085434 + gene protein_coding_gene TRUE TRUE AT5G40180.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28150.1) 0.0839293716869492 0.976557503765719 0.350587155424754 1 0.508187435758051 5.44657969373115 0.0839293716869492 0.0537304411350093 AT5G64980_at 1.22075496377407 1.24350992982288 1.29752010067659 1.47721923823369 1.22097490787974 0.992006910882651 1.42358177365865 1.46627890090448 0.828488210429877 1.19615803441019 1.39401483448659 1.70612964567291 1.28993865713313 1.47758534730811 1.31311726871855 1.61577395294392 1.64126105712990 1.79394682801340 1.26882443781352 0.190888473211863 0.194222625298671 0.187090221977463 0.192694232428298 0.189591014545924 0.191491607143592 0.187090221977463 0.188574485240705 0.189720019657643 0.190080333358522 0.189776491581363 0.189573719763616 0.201653667216377 0.198492067766481 0.191730345275612 0.190772295147725 0.188942674639628 0.188991293253183 0.188050831074334 5 5|0 -|/ 25978231 25979329 25978792.889 25978001 25980461 - gene protein_coding_gene TRUE TRUE AT5G64980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02880.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE77457.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain UBA-like; (InterPro:IPR009060) 0.083319713099887 0.976478963321962 0.350624290641259 1 0.508116294233699 2.60612809563426 0.083319713099887 0.0510610848357906 AT5G18610_at 1.21573119556604 0.91629437791869 1.1654305899987 1.15539042580053 1.12529659026372 1.2136055779996 1.27070794263742 1.12540343209585 1.40078298071948 1.35019572944746 2.03073347449068 1.447237062787 1.52975480776117 1.64164169774015 2.10140562786145 1.91242353020834 1.69878739289073 1.56278846004361 1.50772488928958 0.185520705433775 0.181663838023663 0.181585282542128 0.181585282542128 0.182837385826711 0.185386198476963 0.183933861026639 0.181585282542128 0.185224286944397 0.181585282542128 0.181585282542128 0.181585282542128 0.183103260072723 0.192462476023302 0.183695244047437 0.190307097477480 0.181585282542128 0.186275246225805 0.185651768945782 5 5 + 6194780 6195333 6195008.727 6192738 6195373 + gene protein_coding_gene TRUE TRUE AT5G18610.1 protein kinase family protein similar to PBS1 (AVRPPHB SUSCEPTIBLE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G13160.1); similar to putative serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT58829.1); similar to Os01g0936100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045326.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0852772891577748 0.97572375672999 0.350981510716229 1 0.507432472141845 2.72856470313927 0.0852772891577748 0.0596160358330413 AT5G01690_at 1.97041487604547 1.56315537852540 1.79773008440382 1.15419663341407 1.47707077641336 1.56101165156343 1.10245498160283 1.8488305888341 2.23042977599704 1.65218113689797 2.29147474175966 1.97839507815820 2.47081196023226 1.37256286439507 2.18175771509863 1.80276281072495 1.88722861793426 1.71773397726089 1.66072738639398 0.216376771860092 0.211851577744731 0.210938530936076 0.215505674525626 0.215727897864824 0.210908676104391 0.211926482556451 0.214416422694971 0.220634590183938 0.216922121476341 0.214226615640515 0.214286182168401 0.213980232326496 0.231002937787506 0.212091533869591 0.211975951148441 0.220650791963309 0.212550981845388 0.214145592194238 5 5 + 259582 260318 259863.818 257407 260342 + gene protein_coding_gene TRUE TRUE AT5G01690.1 ATCHX27 (cation/hydrogen exchanger 27); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX26 (cation/hydrogen exchanger 26), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G01680.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84887.1) -0.135076283781811 -0.973608082855492 0.351983653119109 1 0.505519095853954 3.46466832324622 -0.135076283781811 0.185105259414940 AT5G27800_at 1.40196744984501 0.754043947964802 0.6279379258587 0.895438205372968 0.812537032740584 0.999842368705273 0.897852945453103 0.654779889372529 1.35039726791184 0.660527966739829 1.09402025615475 0.910338037764972 1.18327378451465 1.2391731671656 1.11908360627041 0.937947270043287 1.96671126378687 1.54728476766151 0.414186038589905 0.193058732425963 0.192403757808083 0.195266358565231 0.193762450614091 0.198730901431218 0.192430336016783 0.188737220733110 0.196571819343637 0.195717578649584 0.18946513187655 0.197848644939172 0.193737539599640 0.204671267750243 0.197582779457297 0.210111121812177 0.194708187078122 0.202951078972286 0.19451065775041 0.208411124335094 5 5|0 +|/ 9843192 9843781 9843529 9842416 9843808 + gene protein_coding_gene TRUE TRUE AT5G27800.1 contains domain gb def: Gb|AAC61827.1 (PTHR22594:SF2); contains domain ASPARTYL/LYSYL-TRNA SYNTHETASE (PTHR22594) 0.110587440642680 0.972760048863435 0.352385928584502 1 0.504753109257464 1.90959969245618 0.110587440642680 0.132421205226667 AT5G67400_at 1.44296971312725 1.14845665747541 1.67583612583248 1.04864684627027 1.34916554272794 1.25013505233929 1.27165092758377 1.03312137752204 1.46837490661645 1.58063102475027 1.79390314870388 1.22832389746963 1.66510568455126 1.40307685695162 1.34505619393199 1.12280234330298 1.78618493059521 1.08009034360141 1.64531616792020 0.180927846209290 0.187641687798309 0.188252248090394 0.195931057693148 0.183261452362400 0.193107054784917 0.182382389881019 0.18671798007397 0.190604740959420 0.195013342456182 0.189306706920656 0.18040134239045 0.18040134239045 0.193133509103229 0.187369886339258 0.182433127215351 0.181868351316561 0.189595832587059 0.188233521290769 5 5 + 26912598 26913495 26913143.091 26912082 26913714 + gene protein_coding_gene TRUE TRUE AT5G67400.1 peroxidase 73 (PER73) (P73) (PRXR11) Identical to Peroxidase 73 precursor (EC 1.11.1.7) (Atperox P73) (PRXR11) (ATP10a) (PER73) [Arabidopsis Thaliana] (GB:Q43873); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT3G49960.1); similar to peroxidase [Sesamum indicum] (GB:ABB89209.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.108656014532506 -0.972404920300563 0.352554487312946 1 0.504432502678931 2.77391875935188 -0.108656014532506 0.127967776921451 AT5G42170_at 1.38654392244005 1.58154454567825 1.91920960880236 2.31571349594290 1.46455573443205 1.71226682189685 1.11856599209895 1.70958975354143 1.83977640969656 1.67156992468951 1.28707654752113 1.53883479784503 1.46770930624329 1.72723432522416 1.23656558518966 1.18617431263892 1.49547199653674 1.67373889790162 2.00178223867927 0.180371998783004 0.178024755203447 0.184091469806559 0.186105759261124 0.177068858142210 0.176019389627908 0.184143431886907 0.179800696122042 0.184897227480209 0.185175455247333 0.183606866812998 0.184096486671268 0.182527644373694 0.178109124840391 0.187335968797420 0.176019389627908 0.183001771515475 0.182184200271976 0.178933188732114 5 5|0 +|/ 16867605 16868762 16867938.3 16867114 16868935 + gene protein_coding_gene TRUE TRUE AT5G42170.1 family II extracellular lipase, putative similar to carboxylic ester hydrolase/ lipase [Arabidopsis thaliana] (TAIR:AT1G59406.1); similar to carboxylic ester hydrolase/ lipase [Arabidopsis thaliana] (TAIR:AT1G59030.1); similar to Lipolytic enzyme, G-D-S-L [Medicago truncatula] (GB:ABE88957.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.111468027653986 -0.971868395203784 0.352809255292737 1 0.503948315935304 3.29565385710045 -0.111468027653986 0.134706182170773 AT5G40710_at 4.61382632134768 4.88293210817409 5.60071123958188 5.62106523961319 6.70557594479713 5.64272732965987 4.66057740988433 5.0790862236382 4.21532757526801 4.56380840333988 5.58466338667404 5.69053663257102 5.45998968943164 5.9078162358056 5.61522728465633 5.2236153425235 5.26526306963848 5.25253694900155 4.42895627233061 0.209334371314609 0.208234045279928 0.224124900187377 0.214051978288285 0.206881055518252 0.229696917998345 0.224079440379747 0.206934927820216 0.217697470891443 0.213769837692596 0.213591545254915 0.213758066852413 0.209155711027606 0.212745122559702 0.21157182304679 0.206881055518252 0.228233816122247 0.206881055518252 0.215104932051069 5 5|0 +|/ 16312929 16313831 16313414.3 16312264 16314232 + gene protein_coding_gene TRUE TRUE AT5G40710.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G63280.1); similar to Os12g0233400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066450.1); similar to PREDICTED: similar to CG4133-PA [Apis mellifera] (GB:XP_393929.2); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.143757363287415 0.971602112980774 0.352935748505677 1 0.50370809143038 10.3021394724707 0.143757363287415 0.203118485027958 AT5G35380_at 0.596275842442702 0.42039613662998 0.57371276318296 0.51193899921416 0.0847656672365708 0.631960985499895 0.13015542522995 0.69572888977305 0.673251359829799 0.466127442957523 0.117685923846115 0.208749805555171 -0.088237309188353 0.44913808709553 0.466153400952392 0.204147680810501 0.498320284287715 0.0622172786144268 -0.0512045738284073 0.214761968024861 0.216172250388346 0.216466088713992 0.214761968024861 0.215833878058424 0.220526485693135 0.217195221532575 0.215377538444017 0.216279544862075 0.222205857438351 0.214761968024861 0.218328613493433 0.214761968024861 0.221411177759867 0.218249125386779 0.218696430812939 0.215154804421605 0.223221255803305 0.218100378972179 5 5|0 -|/ 13610822 13611280 13611058.8 13610659 13613523 - gene protein_coding_gene TRUE TRUE AT5G35380.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G07020.1); similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G31230.1); similar to serine threonine kinase [Zea mays] (GB:AAL59227.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79207.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79205.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.113688480633653 -0.971312967536602 0.353073139781697 1 0.503447302451160 0.756865157142654 -0.113688480633653 0.139954660468919 AT5G18160_at 1.12393921689018 1.68605516299138 1.68060807533968 1.67922853780732 1.21266834590486 1.38438317493851 1.34876596703387 1.68361427911778 1.31049567425614 1.98451360453306 1.96005099290755 1.73066647191650 1.76885388041023 1.52973713181224 1.99420032599489 1.24011371595693 2.26337386533286 1.71045594931123 2.03135610028755 0.205284603683388 0.209074530060848 0.207259509300761 0.205284603683388 0.210095800305862 0.20615793451001 0.207275630513317 0.212951207069462 0.216319592318317 0.216288911260024 0.209101790348488 0.213517318745775 0.220134956189999 0.207779489316784 0.208601744493436 0.208780987877844 0.211475184242189 0.208352402532509 0.212562317393222 5 5 + 6003370 6003813 6003568.636 6002772 6003911 + gene protein_coding_gene TRUE TRUE AT5G18160.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G09190.1); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) -0.103855481628632 -0.969487336522109 0.35394150795878 1 0.501802187840879 3.24997617903506 -0.103855481628632 0.117062956796428 AT5G37060_at 1.45746238476540 1.41670644175305 1.35073570461389 1.48139146009986 1.15841956604040 1.35045384383470 1.33279281876540 1.01036588725753 1.36663479128270 1.18994418731069 1.26336670896480 1.38593828237736 1.51941850400637 1.48931998363790 1.80055392987138 1.17065570395280 1.38429968282627 1.69603247412841 1.88321512755944 0.190186822774125 0.196321769185004 0.182533804225100 0.185896439630693 0.182533804225100 0.184750987075785 0.186308601453974 0.188266847961893 0.195300555352692 0.192096844411023 0.185101732337625 0.185958663373622 0.186366982640427 0.182533804225100 0.192381275830026 0.184022116596217 0.202929294024187 0.190632073522954 0.194076675432927 5 5 - 14660072 14660544 14660310.636 14659971 14662644 - gene protein_coding_gene TRUE TRUE AT5G37060.1 ATCHX24 (cation/hydrogen exchanger 24); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX25 (cation/hydrogen exchanger 25), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G58460.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84887.1); similar to Os05g0485000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055872.1); similar to Os01g0817400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044623.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) -0.0872341876692807 -0.969175387666864 0.35409004226971 1 0.501521339360328 2.79160577711041 -0.0872341876692807 0.0691284098848717 AT5G41480_at 4.41932534344979 4.0792533816735 5.16877448974915 4.68930779008275 5.95878324726028 4.33836006331075 5.28664999477951 4.24612213752315 4.57883984818115 4.76171115841104 5.84523470076124 5.82072584243324 5.22906055395642 5.57528345418366 5.33961085282446 5.50416183246051 5.02092748684097 5.13590811152639 4.40895753604439 0.256816505266535 0.234916735777185 0.249140292260079 0.243235816762431 0.237953595770409 0.254393467974339 0.244320852265906 0.235641245645072 0.256180901919840 0.234916735777185 0.239379141091406 0.237151157427849 0.239825732423755 0.24354960296751 0.239236689792212 0.234916735777185 0.263753549416115 0.259919648071592 0.234916735777185 5 5|0 +|/ 16614921 16615706 16615354.889 16613155 16615864 + gene protein_coding_gene TRUE TRUE AT5G41480.1 GLA1 (GLOBULAR ARREST1); tetrahydrofolylpolyglutamate synthase Encodes protein similar to dihydrofolate synthetase and folylpolyglutamate synthetase, both of which are involved in folate biosynthesis. similar to ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT5G05980.2); similar to dihydrofolate synthetase/folylpolyglutamate synthetase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99426.2); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645); contains InterPro domain Mur ligase, middle region; (InterPro:IPR013221) -0.221362887284995 -0.968947470605785 0.354198593423313 1 0.501316192068546 9.78183886527139 -0.221362887284995 0.348438024584639 AT5G06050_at 4.51629037154453 4.43310877817579 4.94801276599866 4.63198477051239 5.59465505465444 5.18448311958752 4.86174541346669 4.54925433053024 4.93070586901256 5.16465759809431 5.97687691904421 7.21446301187886 5.53510910086242 6.34393036751695 7.11787648743269 5.67693474232801 5.45027246119916 6.65647776572206 4.99808681758127 0.211394567862365 0.209620206036173 0.214404783850374 0.210077308816466 0.209600370556251 0.211958951433772 0.217686786178829 0.214291093013309 0.219002529038862 0.209618961571708 0.211664983506735 0.209783985149681 0.211034607602299 0.212886872820056 0.215027637956202 0.211667360624887 0.217197302325464 0.215305701220049 0.213879983179801 5 5|0 +|/ 1822690 1823515 1823102.8 1820135 1823771 + gene protein_coding_gene TRUE TRUE AT5G06050.1 dehydration-responsive protein-related similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G39750.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G77260.1); similar to Os01g0846600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044791.1); similar to Os04g0692400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054368.1); similar to ankyrin-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82580.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) -0.0992318543827655 -0.96774190276735 0.354773175945518 1 0.50023172693553 10.4787631765058 -0.0992318543827655 0.105646231758284 AT5G56620_at 1.28969954541832 1.53974764693184 2.05473015646972 1.93606267004243 1.53730737648705 1.55276642839606 1.19716874085416 1.50729842027961 1.64810660480631 1.11466742550472 1.19626892864262 1.50024632430068 1.35117116881565 1.52166192223867 1.38051913148341 1.41025587900363 1.2596402109895 1.90511974928786 1.55788151693473 0.210454470325592 0.194382292866193 0.199276924624415 0.194368802244698 0.198356120449361 0.196204383542541 0.199361565960521 0.190952140102162 0.200446429126305 0.198161424767109 0.202390636487168 0.193134490840531 0.212403549376065 0.204922112985938 0.207319796011904 0.192166821299133 0.217838429211355 0.199460070059671 0.196071448038416 5 5|0 -|/ 22935784 22936963 22936453 22935747 22938365 - gene protein_coding_gene TRUE TRUE AT5G56620.1 ANAC099 (Arabidopsis NAC domain containing protein 99); transcription factor similar to ANAC075 (Arabidopsis NAC domain containing protein 75), transcription factor [Arabidopsis thaliana] (TAIR:AT4G29230.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72224.1); similar to Os01g0191300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042270.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.0878801485930314 0.96729901436451 0.354984429215948 1 0.499833607681229 3.01726208815682 0.0878801485930314 0.0719843804698882 AT5G49680_at 1.66149851717614 1.56880900435424 1.50187322534261 1.48862958227629 1.30941044674864 1.45773284479308 0.933783301813208 1.00338236364106 1.41494557287368 0.950351245747174 1.12731240248519 0.99872705751692 1.17975892818324 1.04457758181086 1.38691364595206 1.20771747429694 1.43567419645264 1.25726859192935 1.64052090241168 0.151967647116950 0.152073123241167 0.152962073100386 0.150802902659062 0.151312765333952 0.153753447778356 0.149117043429779 0.150264885610908 0.153640649751127 0.156544972120300 0.151656369962054 0.149687234579207 0.147623421549128 0.148120412187622 0.151572093217470 0.148973668353505 0.153360105243766 0.148108345484102 0.152329110954035 5 5 + 20198450 20205498 20202272.8 20193611 20205533 + gene protein_coding_gene TRUE TRUE AT5G49680.2 Conserved among eukaryotes, similar to Arabidopsis SABRE. The phenotype of the kip/sab double mutant suggests related functions for both genes, however, the KIP protein is mostly required for tip-growth. Predicted to be targeted to the secretory pathway. mRNA was detected in all organs, with most abundance in pollen and roots. similar to SAB (SABRE) [Arabidopsis thaliana] (TAIR:AT1G58250.1); similar to aberrant pollen transmission 1 [Zea mays] (GB:AAY85656.1); similar to aberrant pollen transmission 1, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95966.1); similar to aberrant pollen transmission 1 [Zea mays] (GB:AAY85657.1); contains domain SUBFAMILY NOT NAMED (PTHR15678:SF9); contains domain FAMILY NOT NAMED (PTHR15678) -0.0791640648763813 -0.967275458117876 0.354995667855854 1 0.499812436817429 2.63564806502111 -0.0791640648763813 0.0326566132330161 AT5G37230_at 1.14885812126450 1.16354755014102 1.85404392700979 1.62970507179782 1.20722038798556 1.81348249733688 1.66732465498874 1.4155952868131 1.20335194863935 1.54408455543518 1.85154583616889 1.28901746378228 1.78024610873163 1.49800996649880 1.56057171004948 0.859632132935383 1.36110900031706 1.65928731594513 1.30371189989000 0.308491074489089 0.316170275523808 0.326123131729144 0.321339284485577 0.330928469148708 0.335003258789725 0.308491074489089 0.308491074489089 0.324476685405131 0.308491074489089 0.308491074489089 0.331337772678876 0.311833712858554 0.337077453812546 0.310166524630220 0.314163261597652 0.308491074489089 0.353602870187890 0.315146275082672 5 5 + 14752525 14752960 14752712.833 14752384 14753010 + gene protein_coding_gene TRUE TRUE AT5G37230.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G37270.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO72647.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79838.1); similar to putative NEP1-interacting protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAC79837.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.104599847655726 0.965133369416917 0.356018730742224 1 0.497889042110983 2.90387730872973 0.104599847655726 0.120078629785115 AT5G27630_at 1.91219811940070 1.68386138174231 1.90329813132960 1.77635013087412 1.65012002997268 1.63746137763077 1.76955713706318 1.61719771699866 1.70538801584379 2.21469125300358 2.18587934685705 1.98860533586705 2.34434581520621 2.08150881841994 2.14481242199627 1.95361599813440 1.66788174160334 2.26912341703283 1.89936649453928 0.152699539434842 0.152108130564636 0.150558705691429 0.152281712043536 0.152358223923277 0.156633043969496 0.154117702452065 0.152445633672731 0.149035214569272 0.151930252755750 0.153093870913619 0.153379216341389 0.147745402739666 0.159809880676965 0.150876781083926 0.150023988995132 0.148539726171230 0.154821678880215 0.151795849427416 5 5 + 9779766 9780723 9780218.909 9776026 9781005 + gene protein_coding_gene TRUE TRUE AT5G27630.1 ACBP5 (ACYL-COA BINDING PROTEIN 5, ACYL-COA-BINDING DOMAIN 5); acyl-CoA binding Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. similar to ACBP4 (ACYL-COA BINDING PROTEIN 4, ACYL-COA-BINDING DOMAIN 4), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT3G05420.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR88580.1); similar to Os03g0835600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051819.1); similar to acyl-CoA binding family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99749.1); contains InterPro domain Acyl-coA-binding protein, ACBP; (InterPro:IPR000582); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.0825458877794119 -0.963992168648035 0.356564638509604 1 0.496865788739558 3.75339893630243 -0.0825458877794119 0.0523835909788599 AT5G12850_at 6.36468654318076 6.41707084923753 6.93589175766421 7.1626612754011 7.32029568351971 7.13201136998107 6.65648202396029 6.89608330445237 6.94457142059448 6.15126221639437 8.0212321590167 8.36832100937803 7.7166925237768 7.80675509133722 8.11427653746883 7.82672053493494 7.31454779242576 7.66216552152213 6.4560787453603 0.195872156211440 0.186198404675647 0.187288930758571 0.189672946198537 0.180976173469355 0.188871058567855 0.180976173469355 0.188529111894245 0.187938357957089 0.181173676165172 0.189354143166558 0.186495347546467 0.185918710401089 0.189021881253871 0.185638809653309 0.183349489958733 0.198487890621865 0.192978376787427 0.190758349524545 5 5 + 4058596 4059164 4058838.455 4056190 4059583 + gene protein_coding_gene TRUE TRUE AT5G12850.1 zinc finger (CCCH-type) family protein similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G41900.1); similar to Zinc finger, CCCH-type [Medicago truncatula] (GB:ABE84364.1); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) -0.085958915489119 -0.963486453421388 0.356806747077245 1 0.496412660934868 14.0462193627658 -0.085958915489119 0.0663565434436126 AT5G26120_at 1.54909776234834 1.93442406660131 1.85370463146986 2.58444781425649 2.20764534122299 2.38984057477261 1.86066884731433 2.08266332044386 1.45317421325503 2.73119821226095 2.17331430492343 2.08641596424742 2.23034816670701 1.91584929909783 2.36576627285537 2.33163202901319 2.4390970461952 2.74912334385017 2.03358802292275 0.223295811778438 0.211375725522724 0.235780778445311 0.228480792996036 0.217657271758427 0.226740664242515 0.209098423286190 0.207448865140171 0.225645022791801 0.223758786591934 0.21630846615659 0.208915749319479 0.213096905201029 0.220085325070601 0.215524196312191 0.221338058659030 0.208966581816757 0.210890348800168 0.226567672700125 5 5 - 9121934 9122758 9122444.273 9121730 9125970 - gene protein_coding_gene TRUE TRUE AT5G26120.1 glycosyl hydrolase family protein 51 similar to ASD1 (ALPHA-L-ARABINOFURANOSIDASE), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT3G10740.1); similar to alpha-L-arabinofuranosidase [Prunus persica] (GB:ABF22680.3); similar to Galactose-binding like; Alpha-L-arabinofuranosidase, C-terminal [Medicago truncatula] (GB:ABE79850.1); similar to alpha-L-arabinofuranosidase [Malus x domestica] (GB:AAP97437.1); contains InterPro domain Carbohydrate-binding, CenC-like; (InterPro:IPR003305); contains InterPro domain Alpha-L-arabinofuranosidase, C-terminal; (InterPro:IPR010720); contains InterPro domain Galactose-binding like; (InterPro:IPR008979) 0.117779209213001 0.963099655493413 0.356992004733477 1 0.496066217295516 4.23735993789078 0.117779209213001 0.151354939537627 AT5G55230_at 9.06223970852876 9.0767172249321 9.10519315472357 9.19551170852211 9.84261900114173 9.74043613284263 8.82145812504364 8.97031956901085 9.34207142703738 9.34851892116122 10.4861022100794 10.4825956229040 10.0574546027758 10.1687246599712 10.4454798823845 9.67873802977173 9.58881506636236 10.1397658401704 9.33244125949935 0.0879641613936967 0.0882865623900634 0.0883409998003012 0.095873864571808 0.0892824038058798 0.0886022086657551 0.0952688840666305 0.088061355623659 0.095981249163443 0.094795186810688 0.0879271568158595 0.0881603553820493 0.089798440509738 0.0897379997131815 0.0880548024526024 0.0882239810338745 0.0882258774414922 0.089664610298776 0.092036845628784 5 5|0 +|/ 22421697 22422373 22422092.8 22419254 22422718 + gene protein_coding_gene TRUE TRUE AT5G55230.1 ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution. similar to microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] (TAIR:AT4G26760.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to microtubule-associated protein MAP65-1c [Nicotiana tabacum] (GB:CAC17796.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1; (InterPro:IPR007145) -0.0790295360871516 -0.961288793000662 0.357860244875803 1 0.494445810222509 18.9627968406940 -0.0790295360871516 0.0350272676046656 AT5G66030_at 8.22127134576496 7.9705027371528 9.00832163198585 8.696529499567 9.41611680749615 8.93752413677948 7.9871131712506 7.60654237314804 8.37108068712931 8.48814854960211 8.97670952180505 8.84267553906395 8.86635460473438 8.7442610804967 8.56401990906797 9.0811622199598 8.65157153302582 8.90810073576906 8.46935326851293 0.138240123403860 0.138343269993051 0.149271237672750 0.144044735034895 0.144566828301882 0.152095575543141 0.146645224222587 0.145269093526082 0.154451689792788 0.149847179817325 0.142098102895683 0.139553303239312 0.141193226933247 0.137023568633991 0.137628105890245 0.136625246506894 0.148710647821995 0.140512203797622 0.151174494441077 5 5 - 26422380 26423326 26422713.364 26422120 26427481 - gene protein_coding_gene TRUE TRUE AT5G66030.1|AT5G66030.2 ATGRIP/GRIP; protein binding|ATGRIP/GRIP Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization. similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to myosin heavy chain-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72643.1); similar to Os07g0472500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059614.1); contains InterPro domain GRIP; (InterPro:IPR000237); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) -0.106622293913475 -0.959800846926028 0.358574798404173 1 0.493116245284626 17.116599076929 -0.106622293913475 0.126458362671200 AT5G04400_at 2.70787857227004 2.59562516057037 2.75805015158982 2.87181611450905 2.28068750015061 2.88914561922815 2.23168211527989 2.90446069850654 2.38368150085919 2.33917344970915 2.82975462972973 2.30011516205658 2.33497241821946 2.44370024256345 2.70168752593595 2.71225338853999 2.60217454225073 3.04457825200338 2.35124727587858 0.249816555109643 0.250551687480317 0.248518304855216 0.255204764477356 0.249118561030054 0.247659582298014 0.247659582298014 0.251141356600259 0.256136742659485 0.251524074820459 0.254079987416553 0.252509662040693 0.247659582298014 0.249259534209887 0.249587650685286 0.248724313202984 0.252541436355439 0.255203254599048 0.252975192197908 5 5 + 1242643 1243144 1242777.091 1241556 1243359 + gene protein_coding_gene TRUE TRUE AT5G04400.1 ANAC077 (Arabidopsis NAC domain containing protein 77); DNA binding similar to ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10490.2); similar to nam-like protein 4 [Petunia x hybrida] (GB:AAM34767.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.120935757119231 -0.959078298632656 0.358922157274022 1 0.492471221904817 5.14451253933542 -0.120935757119231 0.159397890643600 AT5G50790_at 1.73301230244539 1.34187901886541 1.58831570673769 1.85376011577788 1.49305710368509 2.01926673478318 1.21616965054342 1.94151086963377 2.02500197095642 1.91891387783614 1.49586335662479 1.69495663549986 1.94422193750200 1.61066316291877 1.79442314363835 1.39753183503342 1.71174990754971 1.76716586397328 1.63276347659924 0.184831755930496 0.193560816711099 0.187763597903232 0.192931832212663 0.186504366445497 0.196254329564927 0.185158401425846 0.187340174968157 0.187509190769238 0.185952534564233 0.188351395453670 0.181168113941641 0.181205700947411 0.181417481692660 0.195833892703806 0.191942290855494 0.207419978262779 0.192289561965009 0.189255682753873 5 5|0 -|/ 20673870 20674415 20674143.222 20673479 20675225 - gene protein_coding_gene TRUE TRUE AT5G50790.1 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT5G13170.1); similar to N3 like protein [Medicago truncatula] (GB:CAC44123.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) -0.128295826871872 -0.958495915702423 0.359202309333752 1 0.491951617737804 3.41635398221221 -0.128295826871872 0.175329437369181 AT5G26770_at 4.98799525917884 5.68326887048294 7.15085146740767 7.03171412261726 7.67139323714363 6.82452751308116 5.32559068408679 5.10361460553528 5.53506594522878 5.27655042498866 6.41958620875327 5.56402927463915 6.60020123374522 5.28657319804427 5.39121031011794 6.01265387773006 5.69793958231878 5.71738905856792 5.41601223041653 0.236883984456886 0.247548897973033 0.249381694104854 0.245357344401188 0.254874458531490 0.250721949163702 0.237141121568905 0.236883984456886 0.247023422425695 0.242552934817471 0.236883984456886 0.240875022134757 0.240464984927693 0.246249947754224 0.237325819639874 0.239228375388685 0.247920216918192 0.236883984456886 0.236883984456886 5 5|0 -|/ 9408021 9408704 9408408.3 9407723 9410120 - gene protein_coding_gene TRUE TRUE AT5G26770.1|AT5G26770.2|AT5G26770.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05830.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD86886.1); similar to Os05g0135900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054577.1); contains InterPro domain tRNA-binding arm; (InterPro:IPR010978) 0.137467234261368 0.957639048057646 0.359614787138936 1 0.491187592517947 11.8450731582088 0.137467234261368 0.194565631390877 AT5G59730_at 7.54051979493718 8.3660526915489 8.30901966382523 8.53235512838972 9.29871434344713 8.66340339991327 8.62798095956455 8.71662912433172 7.98782701596009 8.23017240896215 9.40545060730362 9.47033562666256 9.41021545858273 9.25784891492203 8.35516495165953 9.70098887224087 8.95326012827234 8.95192291941617 8.33370178333064 0.203583678727222 0.186686467651224 0.200841162249218 0.191635289337820 0.189890573196177 0.195501890754255 0.195793859933193 0.186201716360625 0.209071640302885 0.205168853088938 0.183925836936766 0.185088486734905 0.189729610962736 0.192894613798102 0.199822051468471 0.187516355779840 0.195275979301437 0.202481325214569 0.203728256800131 5 5 - 24081335 24081878 24081582.727 24081103 24083396 - gene protein_coding_gene TRUE TRUE AT5G59730.1|AT5G59730.2 ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70H8 (exocyst subunit EXO70 family protein H8), protein binding [Arabidopsis thaliana] (TAIR:AT2G28650.1); similar to Exo70 exocyst complex subunit [Medicago truncatula] (GB:ABE84275.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.132785971757704 -0.957453736315 0.359704037112191 1 0.491022433920412 17.1928588070614 -0.132785971757704 0.185003593221895 AT5G60980_at 6.52197901640332 6.04750020720842 6.51606315473886 6.42387391508744 6.01708364534196 6.48186188603453 4.77316354877271 5.74336016575721 5.85825403386133 5.92956321565211 7.74626329810512 7.34751084440669 6.75365972031452 7.30414113262803 7.47831700640202 6.8899124273809 6.61153952531324 6.90518953590272 5.95244641907444 0.228608168874885 0.222253766415372 0.230644147675985 0.226302706982955 0.232465452308908 0.246548122429969 0.244762997554162 0.231230224516817 0.239380776218509 0.239773998197221 0.231070944756058 0.229725109962243 0.222342636776813 0.223263377015715 0.225930290336738 0.223580594860491 0.234011719616483 0.228698073411902 0.228444870394087 5 5|0 +|/ 24562293 24563220 24562722.556 24560586 24563495 + gene protein_coding_gene TRUE TRUE AT5G60980.1|AT5G60980.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to Os04g0372800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052571.1); similar to OSIGBa0140A01.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66639.1); similar to putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD23032.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.142105444654550 -0.957151255346228 0.359849752480415 1 0.490752905449172 12.5871046470027 -0.142105444654550 0.204096629844222 AT5G61120_at 1.11191551441584 1.12737609720034 1.20976076533608 1.46352902013553 0.884489283878893 1.11812182572256 0.730273717631055 1.13080971071012 1.4586062296841 1.15907379142830 0.628398672443424 0.529827814615304 0.451733197418466 1.18205967537164 1.31058635637596 1.43386254725466 1.18703289201953 1.3890774253283 0.98183572645147 0.214959985774085 0.212160015884025 0.215120077771569 0.213351848076573 0.221049087148922 0.21211935242286 0.217672506705895 0.216865270074141 0.220921309484143 0.213726435192882 0.216695369082333 0.211910664853257 0.213312651771281 0.220599885165819 0.214985767622045 0.219791611107480 0.220889683042449 0.212086876671497 0.219057217141802 5 5|0 -|/ 24599927 24600793 24600329.111 24599529 24603032 - gene protein_coding_gene TRUE TRUE AT5G61120.1 zinc ion binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61080.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) -0.0929798516219163 -0.95591334991729 0.360446536519839 1 0.489650593775533 2.20398994444115 -0.0929798516219163 0.0915147690711468 AT5G28030_at 8.16370903635849 8.05565928281388 9.6136462507557 9.51685024028811 9.85372526612708 9.3446588469419 9.87463753040983 9.61324367765417 8.16888714076167 8.71102416118027 9.47301238977569 8.97388722245428 9.27164750795014 9.21507938247034 8.25849314922007 9.54288801868247 9.7049879137210 9.50440819193483 7.56989705550207 0.132226385080851 0.132359240155455 0.13276327429122 0.133040288204250 0.133265715006713 0.132819000303763 0.132409573987476 0.132346940163671 0.140257678244722 0.133926694657114 0.127151261598405 0.123569611350950 0.123569611350950 0.127560523551495 0.135441191892870 0.127061308064926 0.129835530890132 0.129537819014842 0.140351528249148 5 5 - 10030523 10031540 10031134.455 10030410 10032455 - gene protein_coding_gene TRUE TRUE AT5G28030.1|AT5G28030.2 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to ATCYSD2 (Arabidopsis thaliana cysteine synthase D2) [Arabidopsis thaliana] (TAIR:AT5G28020.6); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Pyridoxal-5' (InterPro:IPR001926); contains InterPro domain Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site; (InterPro:IPR001216); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Cysteine synthase A; (InterPro:IPR005859) 0.09663561604213 0.954928078177095 0.360922036736361 1 0.488774088821096 17.9510095620057 0.09663561604213 0.102163767583922 AT5G59300_at 6.289037725787 6.60195622225059 7.09995991717353 7.13426356690266 7.59924668285137 7.25905689722809 6.846334149489 7.02933075399237 6.01754067918289 5.85647501390231 7.4104659842212 7.26056258759776 7.19813783281057 7.13386180101817 6.85918157734124 7.22201346893609 7.02109888872097 6.99761357831982 5.57148531302374 0.222179990826581 0.210746733237664 0.222769677366228 0.228132895108186 0.22035598272588 0.231331716014826 0.213683373614429 0.219022360707153 0.221874206107587 0.243349888445808 0.210148240388385 0.216895651259887 0.223319507843138 0.219834369579588 0.211895596077476 0.210148240388385 0.223067037742816 0.235771923243758 0.231146179172457 5 5 - 23937283 23938425 23937972.727 23937094 23938517 - gene protein_coding_gene TRUE TRUE AT5G59300.1 UBC7 (ubiquitin-conjugating enzyme 7); ubiquitin-protein ligase ubiquitin conjugating enzyme E2 Identical to Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) (UBC7) [Arabidopsis Thaliana] (GB:Q42540;GB:Q8RXQ3); similar to UBC13 (ubiquitin-conjugating enzyme 13), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G46460.1); similar to Os01g0839700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044755.1); similar to ubiquitin-conjugating enzyme [Arachis hypogaea] (GB:ABI84264.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) -0.0909829699191378 -0.95343215754571 0.361644842542507 1 0.487444740113296 13.4589152229128 -0.0909829699191378 0.0862346467786288 AT5G18930_at 1.73675533542213 1.68086308830717 1.21846425325287 1.55035259056988 1.15663691513175 1.39308774927112 1.40385782520457 0.999333632058497 1.91309414543204 1.11984645316728 1.19335092329875 1.65607607625977 2.24134237766663 1.49972662963796 1.63535760212246 1.98965276629134 2.23614399098799 1.66477394595722 1.80452897199121 0.237770683599215 0.237117005009751 0.232776434493253 0.236649885125162 0.240331914805859 0.241952839314259 0.242113437683435 0.239298153407691 0.236496909847789 0.243886011905229 0.236448171762527 0.232583370239482 0.234155482188461 0.232583370239482 0.240931482296937 0.236208452364932 0.236326594445744 0.241002503788681 0.23894160988214 5 5 - 6312228 6312747 6312494 6311727 6313325 - gene protein_coding_gene TRUE TRUE AT5G18930.1 BUD2/SAMDC4 (BUSHY AND DWARF 2); adenosylmethionine decarboxylase similar to SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE) [Arabidopsis thaliana] (TAIR:AT3G02470.3); similar to putative S-adenosylmethionine decarboxylase [Oryza sativa (japonica cultivar-group)] (GB:AAS90647.1); contains InterPro domain S-adenosylmethionine decarboxylase; (InterPro:IPR001985) -0.0956320496205944 -0.953319023025604 0.361699549692111 1 0.487344273538554 3.08094037159789 -0.0956320496205944 0.099836588654409 AT5G55320_at 1.33387975324992 1.50530512310627 1.77149089631331 2.17634081579139 1.34299554336029 1.59509362168044 1.6505440618347 1.70943592088975 2.00686250333338 1.84198297052359 1.84428967215634 1.81288997746234 1.98419467274621 1.98188883905452 1.41004064726608 1.70258021616191 2.14997257049943 2.2297034008998 2.05763128489471 0.179429791026367 0.190595242298418 0.182266789266847 0.183138987500215 0.180152520636388 0.184030460237667 0.178955177446049 0.178169655105848 0.178812044582861 0.176384741669616 0.178886587354685 0.176029969511893 0.181905614350574 0.179957701131332 0.180134548537268 0.175406595048557 0.183667005232043 0.184286137807761 0.176681936768608 5 5 - 22452949 22453481 22453190.364 22452906 22453925 - gene protein_coding_gene TRUE TRUE AT5G55320.1 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55350.1); similar to wax synthase isoform 2 [Vitis vinifera] (GB:AAO18665.1); contains InterPro domain Membrane bound O-acyl transferase, MBOAT; (InterPro:IPR004299) -0.0914297096129032 -0.951045345701406 0.362800266414941 1 0.485327283510842 3.56477100991895 -0.0914297096129032 0.0882938066911574 AT5G11840_at 8.97792389050908 9.1384396396836 9.70968080608516 9.87814976791906 10.0060125365505 9.36824340010705 9.37494739154005 9.61495471501923 9.29372671428115 9.15254297174487 10.0506966081925 9.69937350206043 10.0056548188790 10.0612255465957 9.70540255191395 10.1122339943330 9.6316957968722 10.0176619105646 9.02296405358706 0.106665979701541 0.102779110977757 0.115400512420830 0.103713779448728 0.103850520322489 0.119536100027368 0.111381385042890 0.102507098358430 0.106947472976232 0.107779532677217 0.104994400312474 0.102814779787228 0.103445913290696 0.112031174879945 0.105542430816115 0.106056482139680 0.109827295440732 0.103996031212498 0.112940815095789 5 5|0 -|/ 3813619 3814590 3814193.7 3813611 3814806 - gene protein_coding_gene TRUE TRUE AT5G11840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67370.1); similar to Os05g0539900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056177.1); similar to Protein of unknown function DUF1230 [Medicago truncatula] (GB:ABE85761.1); contains InterPro domain Protein of unknown function DUF1230; (InterPro:IPR009631) -0.104890212978971 -0.950987730167287 0.362828190053825 1 0.485276224450469 19.0419961872838 -0.104890212978971 0.124611385090014 AT5G46280_at 3.13378680613921 2.78683902769011 3.60101108505787 3.22696295874058 2.75223804982399 2.48287284220304 3.43850740874397 3.33277874104278 2.55325124932434 2.49044107196449 4.03068812846073 5.22187688524839 3.06181500642622 3.76978332543494 5.14718237855251 3.01567121587637 3.39041184666385 3.36076560690789 2.63897561625285 0.218110488640515 0.216066867069731 0.222021194659001 0.21735255000266 0.228982504663268 0.221729172415074 0.225311501384211 0.215604157746063 0.216898778309681 0.225164038118638 0.217665923404125 0.229186448309801 0.221480641055954 0.220273220981667 0.225794657976692 0.215604157746063 0.228987541111726 0.226463738959519 0.223819035424528 5 0|5 /|- 18787298 18787935 18787549.2 18786924 18790885 - gene protein_coding_gene TRUE TRUE AT5G46280.1 DNA replication licensing factor, putative Identical to DNA replication licensing factor MCM3 homolog (Minichromosome maintenance protein 3 homolog) (MCM3) [Arabidopsis Thaliana] (GB:Q9FL33;GB:O65400); similar to PRL (PROLIFERA), ATP binding / DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT4G02060.1); similar to mini-chromosome maintenance protein MCM3 [Pisum sativum] (GB:AAN73053.2); similar to replication ori (GB:AAD48086.1); similar to MCM; Nucleic acid-binding, OB-fold [Medicago truncatula] (GB:ABE90103.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain MCM protein 3; (InterPro:IPR008046); contains InterPro domain MCM; (InterPro:IPR001208); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.0958329606934225 0.949360173020425 0.363617630623402 1 0.483834940099581 6.31220642078532 0.0958329606934225 0.101502266398420 AT5G17000_at 7.3249827016546 7.23944355509431 8.07888440318766 8.08339541645791 7.85084262530289 7.87306753454377 7.49254652889957 7.57071183501006 5.50122756214306 6.064049762423 7.14466659366153 6.52485313886357 7.27034881943043 7.22670405543676 6.61307902007453 7.615320620874 7.55960209030974 7.18892218692819 5.84802987912157 0.198726223045762 0.192475823165815 0.192475823165815 0.200847547219337 0.197677273567808 0.192475823165815 0.192475823165815 0.196227804768250 0.253561001668037 0.206362562224626 0.200118325102022 0.200492927961339 0.203171238225357 0.193967521947874 0.207509534061218 0.196881488780774 0.199429226283314 0.192606597668811 0.231969389484821 5 5|0 -|/ 5585108 5585780 5585312.2 5584804 5587066 - gene protein_coding_gene TRUE TRUE AT5G17000.1 NADP-dependent oxidoreductase, putative similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G16990.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) -0.0759807841308868 -0.945863515726622 0.365317835571921 1 0.480745415654011 14.1629207251488 -0.0759807841308868 0.020432953738017 AT5G53330_at 8.75381686030017 8.79334226020928 9.61703086499415 9.7706861974154 10.0129126661371 9.23190237949723 8.91721877069487 8.57914695224987 8.65459847801155 8.41184437098553 9.25193806608791 9.27818570524937 9.38870653635869 9.33295288827234 9.02127770911186 9.44715254160296 9.33199190397987 9.3956376801854 8.23922926269078 0.135623503811480 0.130762246155134 0.135232934534938 0.136101129767436 0.136418047689238 0.142603468316415 0.130762246155134 0.131908945344597 0.133440689335374 0.140810079094027 0.137782046333001 0.134666789788224 0.133066356344138 0.133348868804864 0.136615881276178 0.130762246155134 0.139272457494304 0.13236677021124 0.138528550586499 5 5|0 +|/ 21656542 21657861 21657171.2 21656443 21658189 + gene protein_coding_gene TRUE TRUE AT5G53330.1 similar to Os06g0160400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056879.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.114845296553163 0.94466608071767 0.365901379590905 1 0.479689584480513 18.0801093269799 0.114845296553163 0.149813957264672 AT5G18520_at 8.96068534413098 9.26278069071235 9.71960981875003 9.84117668319673 9.84141027542595 9.70877637490036 9.33419161707293 9.66446318358978 9.02649602427973 8.5560233037468 9.9904132717811 10.0077138550495 9.88690671276176 9.75316933559403 9.8567105281566 9.92973731302889 9.5902473005368 9.87465393496127 8.52875099639539 0.150710357264457 0.140353310305200 0.145958644298762 0.148154194458385 0.140353310305200 0.151260735256957 0.146883437679482 0.143665436977969 0.172345351064057 0.146034749262799 0.146215214116089 0.143109139254587 0.140353310305200 0.153886712531643 0.152187884487736 0.141191723318870 0.156972227191192 0.148240952957517 0.146664445132903 5 5 + 6145772 6146312 6145982.818 6144965 6146572 + gene protein_coding_gene TRUE TRUE AT5G18520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09570.1); similar to Os01g0836800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044733.1); similar to Os05g0462500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055767.1); similar to unknown [Sorghum bicolor] (GB:AAQ06259.1); contains InterPro domain Lung seven transmembrane receptor; (InterPro:IPR009637) 0.0892218857406046 0.944178585202458 0.366139140922181 1 0.47926005719865 18.8241121516179 0.0892218857406046 0.0834818209692592 AT5G38660_at 10.9419282836161 11.0429778831689 11.5768556607048 11.4365017161261 11.6723156301977 11.3930198207394 11.7252830358691 11.3066185639399 11.2395393594909 11.2178239484171 12.0061872739854 11.8263132669179 11.7899529545837 11.6131284507827 11.8216806912134 11.8230746199111 11.8383663246349 11.7575146907926 11.0523355078758 0.0900306546637936 0.0906014099891169 0.0987143543833503 0.0900684790866871 0.089221214143154 0.0912373185397407 0.089221214143154 0.091055579296005 0.0967810885621622 0.089221214143154 0.0897445550792587 0.0909553482437303 0.0922415033386593 0.103559055364862 0.097804001850634 0.089221214143154 0.100716726427172 0.0974604357035804 0.0919963854793488 5 5|0 -|/ 15490890 15492141 15491530 15490339 15492765 - gene protein_coding_gene TRUE TRUE AT5G38660.1 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) mutant has Altered acclimation responses; similar to Os08g0359000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061627.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL56528.1) -0.0920255826961098 -0.944101853667271 0.366176574494339 1 0.479192466650971 22.8766510189772 -0.0920255826961098 0.0920931072749426 AT5G35600_at 1.41663349440900 1.40407327152357 1.5861038960939 1.51066433172277 1.49971722325102 1.76107321260167 1.0572580474912 1.17540154034271 1.67724537803894 1.29351205088984 1.06511103569716 1.05734754036486 1.32808569550010 1.17768861466448 1.31747643136659 1.11039816452199 1.77586003570317 1.06218739672037 1.62811593745156 0.177519208433844 0.177519208433844 0.181779835241514 0.186016699779741 0.178097421599695 0.187961185626585 0.181123312814869 0.182778517628194 0.181565174244153 0.187566221105058 0.187909803367199 0.183110433051896 0.185456347509018 0.183012877839541 0.180795072378605 0.180052889141086 0.185205729037028 0.182480502378355 0.195563709454192 5 5|0 -|/ 13787507 13788170 13787812.5 13787351 13788942 - gene protein_coding_gene TRUE TRUE AT5G35600.1 HDA7 (HISTONE DEACETYLASE7); histone deacetylase similar to HDA6 (HISTONE DEACETYLASE 6), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G63110.1); similar to Histone deacetylase superfamily [Medicago truncatula] (GB:ABE82485.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286); contains InterPro domain Histone deacetylase; (InterPro:IPR003084) -0.0805764699366165 -0.943555591526072 0.366443148257998 1 0.478711412662715 2.81122920373487 -0.0805764699366165 0.0513694704839700 AT5G03590_at 0.930340114845246 0.901207812827708 1.35539038347137 1.14427057189835 0.90516716541211 1.23492697391329 0.636537886668228 0.983330404490396 1.55207569920792 1.07950858260814 0.990709577329238 0.909792073073351 1.65854596143011 1.14475238519704 1.08420785763365 1.35032440475374 1.43942175721937 1.23340500961066 0.9544090244433 0.232461046060483 0.227667308097473 0.231896962879558 0.236525383555906 0.231699882277955 0.233956075799026 0.238064620148931 0.226396258620033 0.241705279008139 0.23117665130834 0.232074863799733 0.234516595791835 0.234225258454967 0.225930741954047 0.230427822557066 0.232285740838809 0.233670666214822 0.230256226518614 0.228816123092173 5 5|0 +|/ 909065 910117 909514.7 908562 910148 + gene protein_coding_gene TRUE TRUE AT5G03590.1 GDSL-motif lipase/hydrolase protein-related similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G03600.1); similar to GDSL-lipase -like [Oryza sativa (japonica cultivar-group)] (GB:BAD46208.1); similar to Os09g0567800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063965.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.0914510676972555 0.943148549382354 0.366641873426911 1 0.478353110567383 2.22225940437451 0.0914510676972555 0.0906560111763759 AT5G37420_at 1.37032502501468 1.84976145591078 2.06094703981020 1.78968762222999 1.48096882234743 1.91740752497419 1.778920190926 1.56477935336521 1.74365268632337 1.82061579593948 1.62410097336946 1.72716232598270 1.7512753746055 1.87355149710953 2.04197785336383 1.34222896863683 1.63341561311563 1.84433925585033 1.96446747093752 0.193100388697180 0.180622948642973 0.194465308671008 0.180522654590798 0.178442192428304 0.188239208979989 0.188439572180828 0.184433953964696 0.193806820320581 0.184025953973541 0.185889872844372 0.186332469355844 0.185595676753206 0.183395933106254 0.183664634517115 0.178239500962061 0.191151741102523 0.182370667978130 0.189938244600710 5 5|0 +|/ 14858513 14859185 14858827 14857373 14859300 + gene protein_coding_gene TRUE TRUE AT5G37420.1 transcription factor similar to binding [Arabidopsis thaliana] (TAIR:AT5G37410.1); similar to Kelch repeat-containing proteins (ISS) [Ostreococcus tauri] (GB:CAL53955.1); contains InterPro domain Protein of unknown function DUF577; (InterPro:IPR007598) -0.104959343827586 -0.94233096947758 0.367041263167102 1 0.477633818566488 3.51293386289948 -0.104959343827586 0.127142308997781 AT5G46300_at 1.83382341507115 1.61350802707670 1.85649639526297 1.68761190038367 1.66397761771407 1.61856132764408 1.49540500643935 1.64437065421917 1.59134395592372 1.61034562122514 1.85027495563461 1.59538641344479 1.88293724849426 1.72864986015567 1.50925071328459 1.43241185692443 1.25398286490178 1.70063031786140 1.60348604165663 0.184114365239462 0.185712073045199 0.189769741099321 0.189654383464819 0.184162299049149 0.186355549377347 0.183757166403021 0.183757166403021 0.183825348881897 0.193434122477748 0.183757166403021 0.193077308063551 0.183757166403021 0.192178326124749 0.184160069827278 0.194658788092602 0.185151051332543 0.193248798161492 0.192024772801806 5 5|0 +|/ 18800923 18801791 18801361.444 18800837 18802013 + gene protein_coding_gene TRUE TRUE AT5G46300.1 unknown protein -0.0811928828944005 -0.941178730846011 0.367604662213618 1 0.476620982638999 3.28717716052949 -0.0811928828944005 0.0550831245385653 AT5G64590_at 1.94071331566257 1.89403844660725 2.40049254569252 2.29995886453012 1.79266372239753 2.12275474981246 1.99423260486920 2.09202058553855 2.19551923668724 1.88262928881211 2.24173361711576 2.46194723579071 2.53816772445261 2.45158184483295 2.57604936305185 2.46632595663326 2.6833619958339 2.71196085634938 2.26334056094252 0.203237236951111 0.206072872692325 0.20748508429359 0.208952643662484 0.202024679833270 0.203842746637894 0.203881300141023 0.204691904790253 0.202846994063302 0.215499683492618 0.202915669745718 0.200668827388702 0.200203053581758 0.202619920394892 0.206468286691586 0.200203053581758 0.200203053581758 0.200595259362741 0.204883279377095 5 5|0 -|/ 25839567 25840234 25839981.7 25839558 25840427 - gene protein_coding_gene TRUE TRUE AT5G64590.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62200.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) 0.0829559025624133 0.94074196609733 0.367818384244275 1 0.476237329588847 4.38221973925786 0.0829559025624133 0.0625893862872993 AT5G09840_at 1.23627454149518 1.63965510124223 1.75712682292663 1.65699215863617 1.61359069781783 1.50864888837168 1.94831865158206 1.74649290595190 1.41232589837614 1.04579956662886 1.30097957217093 1.88078002985632 1.26633459037213 1.76714813306017 2.15429214988853 1.51396675807140 1.19216068440090 2.02130336274687 1.24568246745875 0.185226379898977 0.188960638164536 0.185176408752259 0.191646380800254 0.190607072106601 0.186709236687011 0.194676433541077 0.187440976681604 0.207136155187361 0.194146517628543 0.192191507003423 0.197861243186586 0.212279865371880 0.189108927429757 0.190240615608929 0.192060893055795 0.188289073914448 0.185176408752259 0.194496494361621 5 5 + 3061462 3061824 3061618.273 3058998 3061971 + gene protein_coding_gene TRUE TRUE AT5G09840.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64710.1); similar to 80C09_3 [Brassica rapa subsp. pekinensis] (GB:AAZ41814.1); similar to Os12g0162900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066226.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) 0.0884195020281799 0.94060284586629 0.367886478555645 1 0.476115157914689 3.07424912311570 0.0884195020281799 0.0819938114145481 AT5G24980_at 10.6388598574610 10.6880799552519 11.1584810386515 11.2643054872937 10.9501826467208 10.4904032647372 10.2544530601616 10.1206199903440 9.50658722116627 9.81402361774604 10.751971967888 10.8078120229198 10.8310498152534 10.4995130413601 10.6692678411244 10.5637938940277 10.7929605742475 10.5619933746541 10.0713676147667 0.217573052490420 0.199075958771550 0.192418452561378 0.212866817635503 0.192418452561378 0.217341252836572 0.192418452561378 0.192418452561378 0.263257266897194 0.192418452561378 0.192418452561378 0.192418452561378 0.192418452561378 0.221458068683453 0.192418452561378 0.192418452561378 0.224759325340107 0.237803493741383 0.192418452561378 5 5|0 +|/ 8609098 8609154 8609126 8609084 8609531 + gene protein_coding_gene TRUE TRUE AT5G24980.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10745.1) 0.0894119574329142 0.940119588076901 0.368123085667015 1 0.475690890915559 20.9367338964081 0.0894119574329142 0.085295026144805 AT5G01190_at 2.26717298713950 2.37201479763549 2.81287005095702 2.78886495902098 2.58324261414404 2.64407761538574 2.78296651048317 2.65286093760573 2.7540428006617 2.75347079002301 2.92350286659419 3.62058617387807 3.3515834344257 3.24552491717349 3.60784327782153 3.27047444949312 3.46404715692559 3.40299813296702 3.24632728093945 0.208834934783112 0.206459392919112 0.20376734638472 0.202140222878537 0.20388608618003 0.214280970789133 0.202140222878537 0.214898504798801 0.212625117276648 0.210036290848045 0.204675490342257 0.202140222878537 0.214971729834542 0.207117683496816 0.207845960060698 0.204877412883241 0.221462452718495 0.208415017333549 0.205573430943489 5 5 + 73900 74560 74095.818 72391 74755 + gene protein_coding_gene TRUE TRUE AT5G01190.1 LAC10 (laccase 10); copper ion binding / oxidoreductase putative laccase, a member of laccase family of genes (17 members in Arabidopsis). similar to IRX12/LAC4 (laccase 4), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G38080.1); similar to LAC16 (laccase 16), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G58910.1); similar to LAC11 (laccase 11), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G03260.1); similar to diphenol oxidase (GB:AAC49536.1); similar to laccase [Populus trichocarpa] (GB:CAA74103.1); similar to laccase (EC 1.10.3.2) precursor - common tobacco [Oryza sativa (japonica cultivar-group)] (GB:AAX95423.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.0765609979520766 -0.938180296231939 0.369073671860642 1 0.473990156382127 5.75239231323041 -0.0765609979520766 0.0310518166601939 AT5G50380_at 7.87808378307166 8.25868626192637 8.86652772405623 9.0188730166131 9.27839975158249 9.12518241738103 7.65730464540964 7.92924985238767 7.68254906383837 7.66113862822312 8.62490440454473 8.57518245897048 8.45436105446998 8.52698239130007 7.90552877489925 8.83060280419433 8.14649420161636 8.65840613494741 7.70794459449708 0.163878820788597 0.160711874644657 0.165876950351567 0.160954888495328 0.16512881485767 0.165432467724559 0.156422026208770 0.160568274187138 0.167848703367348 0.169746025896933 0.159675196248068 0.162098565756698 0.156429863462976 0.168909734796090 0.157357091394338 0.155055676330143 0.172445579378557 0.160214947602713 0.177139838110978 5 5 - 20533615 20534129 20533886.273 20533338 20535799 - gene protein_coding_gene TRUE TRUE AT5G50380.1 ATEXO70F1 (exocyst subunit EXO70 family protein F1); protein binding A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. similar to ATEXO70D3 (exocyst subunit EXO70 family protein D3), protein binding [Arabidopsis thaliana] (TAIR:AT3G14090.1); similar to putative leucine zipper protein [Oryza sativa (japonica cultivar-group)] (GB:BAB86177.1); similar to Os04g0382200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052606.1); similar to Os02g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046915.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) 0.090294762122611 0.936270848612224 0.370011338273825 1 0.472318459679948 16.5761310350389 0.090294762122611 0.0891688538232466 AT5G08090_at 1.53272975631289 1.17398205492872 1.82570588584886 1.96795422401315 1.46311685209113 1.78736089394392 1.41511507562893 1.35255593942791 2.00233656661541 2.58445701306436 1.81025386082031 2.07716855542205 2.00495062539968 2.06005619611811 1.70368402810698 1.86962816178166 2.12847004815467 2.02304919268203 2.14036507289289 0.213631370437315 0.210494820296575 0.206247156353523 0.217191919166882 0.202581428463440 0.212988369571493 0.206538472653541 0.205147327468465 0.222854792402695 0.203619753102582 0.211136247362649 0.205384746959194 0.205329517682566 0.208400507716716 0.213711843069509 0.207535474716014 0.213140275996092 0.206844387634163 0.208654737415092 5 5 + 2592318 2592868 2592628.636 2591712 2592900 + gene protein_coding_gene TRUE TRUE AT5G08090.1 unknown protein -0.0895807065507352 -0.93314449550158 0.371550248219232 1 0.469587523358253 3.66583698581689 -0.0895807065507352 0.0878978602365508 AT5G43520_at 0.478213621232833 0.893515423366081 0.581936246941062 0.361987794853356 0.335581262072683 0.574484405431367 0.393210036013138 0.70701603387332 0.506433867072293 0.764306724410327 0.916959549491674 0.275685792108441 0.57430983960025 0.61356115764935 0.729479815888754 0.164040720386263 0.384490836718873 0.7705571080035 0.20946569522042 0.187136782878963 0.195056770793778 0.188135137343066 0.187104029700717 0.191613129304708 0.188811719470262 0.189576117755368 0.187104029700717 0.187554437152392 0.196955210179219 0.189052449239244 0.187104029700717 0.187104029700717 0.188293085597844 0.189566603848038 0.190779972921187 0.191289998983521 0.187802910290062 0.200972035093898 5 5 - 17502695 17503201 17502977.091 17502667 17503419 - gene protein_coding_gene TRUE TRUE AT5G43520.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G44380.1); similar to Hypothetical protein [Oryza sativa] (GB:AAK55769.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.0958678352685899 -0.933069373054701 0.371587282284431 1 0.469521996262396 1.06426195199726 -0.0958678352685899 0.106171796995332 AT5G60800_at 6.55262755245416 6.92789055620354 8.61239417487512 8.63789243851985 6.74000702172104 6.85565492644946 5.16115357426713 5.19448279271247 7.39023711514576 6.70741277789956 7.30702133144982 8.27292974802426 6.51718526651403 6.93792133885756 8.41324189422253 7.75915437720052 5.91674663812968 6.70681441371275 7.15198227614127 0.265482470642124 0.264774667119925 0.28980252264062 0.285207662314749 0.265217000367612 0.265131989870501 0.298536085557473 0.287688037811903 0.270327189571364 0.268006044372848 0.264774667119925 0.273470372696224 0.268233519398102 0.264815328546068 0.269080107962812 0.270919495005474 0.289763426523531 0.272330458789409 0.264774667119925 5 5 - 24478316 24479117 24478637.364 24478113 24479762 - gene protein_coding_gene TRUE TRUE AT5G60800.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36950.1); similar to heavy metal-associated domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP53965.1); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.0836850501874133 -0.93209875550019 0.372066016022692 1 0.468675752077606 13.9913066791884 -0.0836850501874133 0.0683418608406559 AT5G65685_at 8.39647198979607 8.36658616146119 9.21626741314245 9.04302081654509 9.8346733469053 9.11845555097224 9.31450450393765 8.73771743695457 8.80703014638207 8.65198831113902 9.4495819219459 9.53277632793518 9.23158843110458 9.43104069074177 9.46187307110916 9.63232673182377 9.31989564618477 9.27182539437529 8.68058856867934 0.125076612763315 0.123355423645006 0.118061705365568 0.122666206541792 0.121153592303668 0.119667880719905 0.118081935020292 0.120221040131290 0.126799096730980 0.125284836619279 0.122494931545021 0.122609142832772 0.119036623217903 0.119086127088521 0.123588683715457 0.121047236046358 0.127067801149009 0.124432758842022 0.128226492271756 5 5|0 -|/ 26290488 26291411 26290885.8 26290361 26293145 - gene protein_coding_gene TRUE TRUE AT5G65685.1 soluble glycogen synthase-related similar to starch synthase-related protein [Arabidopsis thaliana] (TAIR:AT4G18240.1); similar to Putative starch synthase [Oryza sativa] (GB:AAK98690.1); contains InterPro domain Starch synthase catalytic region; (InterPro:IPR013534) -0.118705677331547 -0.932093379745473 0.372068668704680 1 0.46867106721543 18.068245086949 -0.118705677331547 0.162021942435235 AT5G46540_at 1.15457179599404 1.20246199252336 1.871034099852 1.82267326884846 1.31801746757708 1.50677536410030 1.63578841417046 1.45371024599541 1.32305516507064 1.56600576346918 1.41114594239917 1.08001127639387 1.16006428075322 0.988812142005164 1.33565193141507 0.879268119979114 1.68240567736601 1.48155265349333 1.55590142548721 0.176018044885821 0.186491941313259 0.177690189963382 0.194805341725366 0.176577630969596 0.180928556364785 0.18040273393467 0.180779974964967 0.187299631522306 0.1809122432031 0.183793232365425 0.175133950969263 0.182364516991668 0.178038278657585 0.183764870106115 0.178613244684218 0.184360073685476 0.190714876618262 0.184005366636431 5 5 - 18894441 18894876 18894649.273 18894419 18899574 - gene protein_coding_gene TRUE TRUE AT5G46540.1 (P-GLYCOPROTEIN 7, PGP7); ATPase, coupled to transmembrane movement of substances Identical to Multidrug resistance protein 7 (P-glycoprotein 7) (MDR7) [Arabidopsis Thaliana] (GB:Q9FHF1); similar to PGP11 (P-GLYCOPROTEIN 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G02520.1); similar to PGP9 (P-GLYCOPROTEIN 9), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G18050.1); similar to PGP4 (P-GLYCOPROTEIN 4, P-GLYCOPROTEIN4), ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase [Arabidopsis thaliana] (TAIR:AT2G47000.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE92210.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE80334.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABE93334.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.0786603452896005 -0.931811236993736 0.372207911745484 1 0.46842521721293 2.86263814162495 -0.0786603452896005 0.0468892701288633 AT5G27660_at 2.09759574151455 1.98134110308379 2.7511721104437 3.18900995816813 2.35679464285301 2.67867516957285 2.31165593220528 2.39161126218051 2.33072788417596 1.94005277792196 1.95574890126861 2.17586556650277 2.63219729188798 2.12537674647296 1.94311601470104 2.55111717743604 2.45180196579208 2.61657634713099 2.27921470296243 0.232372652538375 0.228419592760492 0.224856985863848 0.225104062779685 0.223101204025432 0.223207388359383 0.223718935187218 0.218582482540745 0.225487572330605 0.233220153761824 0.223809072475493 0.219394598613909 0.224513643390171 0.220136740581782 0.227137040129293 0.225986996587876 0.219078020257611 0.226261985083753 0.220519494873502 5 5|0 -|/ 9789924 9790986 9790563.111 9789902 9792302 - gene protein_coding_gene TRUE TRUE AT5G27660.1 serine-type peptidase/ trypsin Identical to Putative protease Do-like 14 (EC 3.4.21.-) (DEGP14) [Arabidopsis Thaliana] (GB:Q3E6S8); similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to PREDICTED: HtrA serine peptidase 2 isoform 2 [Macaca mulatta] (GB:XP_001110803.1); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1A, chymotrypsin; (InterPro:IPR001314); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) 0.0925127143022677 0.93149492079749 0.372364064092189 1 0.468149663646486 4.71463538487898 0.0925127143022677 0.0971601458891004 AT5G42790_at 10.1831959487891 10.0078848340731 10.9160270622581 10.8861006998895 10.7338811552972 10.4712066813552 10.0004234020177 9.73388581426982 9.6315212696705 9.38985970304786 10.4171322749656 10.2889428017388 10.0131163101208 10.3872493743503 10.1407714005301 10.2122214287131 10.0648550505996 10.0612745976818 9.44013537596694 0.0943258085351113 0.0936886063649808 0.0952422773946174 0.0988622508327578 0.0951468941408687 0.0972324368619862 0.0988156913307625 0.0975254398051212 0.117211379263133 0.105423962231699 0.0973718376172265 0.0936886063649808 0.0974361350884614 0.0982114585522002 0.100719327410217 0.0936886063649808 0.0999111524215376 0.102135403521043 0.104716760981738 5 5 - 17176510 17177942 17176873.364 17176272 17178298 - gene protein_coding_gene TRUE TRUE AT5G42790.1 PAF1 (proteasome alpha subunit F1); peptidase encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome) Identical to Proteasome subunit alpha type 1-A (EC 3.4.25.1) (Proteasome subunit alpha type 6) (20S proteasome alpha subunit F-1) (Proteasome 30 kDa subunit) (Proteasome component 2A) (AtPSM30) (PAF1) [Arabidopsis Thaliana] (GB:P34066;GB:O81150;GB:Q8LF69); similar to PAF2 (20S proteasome alpha subunit F2), peptidase [Arabidopsis thaliana] (TAIR:AT1G47250.1); similar to 20S proteasome alpha 6 subunit [Nicotiana benthamiana] (GB:AAN07899.1); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353); contains InterPro domain Proteasome alpha-subunit; (InterPro:IPR000426) 0.0845257179445658 0.931242955151141 0.372488482516004 1 0.467930224015243 20.2092594602767 0.0845257179445658 0.0717018203344895 AT5G58500_at 2.24494006482742 1.93643948834523 2.42704764186523 2.45482224147508 1.99038099683389 2.39423863299113 1.67674920001936 2.15231583569345 2.10662705488061 2.41290683464309 2.61451456675612 2.50263266774477 2.23234067562533 2.9518146450704 2.68393671872634 2.42050477437061 2.81316766085175 2.8964722465084 2.34052566358991 0.215585607770287 0.213032048724406 0.223673797936672 0.212054974378080 0.220619346347003 0.211238231241342 0.219099298889431 0.216799244107219 0.223868377723346 0.213406405447979 0.212034124815795 0.209481791239348 0.216323752548987 0.211851343246640 0.230893931513180 0.217861745438199 0.212078605811355 0.228586087185905 0.215970228170983 5 5 - 23662762 23663267 23663022.636 23662761 23663309 - gene protein_coding_gene TRUE TRUE AT5G58500.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07090.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB68109.1); contains InterPro domain Protein of unknown function DUF640; (InterPro:IPR006936) 0.101102493364584 0.931185124138127 0.372517043129926 1 0.467879865366183 4.62267151883697 0.101102493364584 0.120544548594483 AT5G39730_at 9.29632302089334 9.40885698628643 10.2599073285977 10.3639249992733 10.2318000342332 9.80377015007331 9.80340766617804 9.70617259883973 8.48340857894353 8.93016538364004 9.51910763946227 9.4175354804341 9.69221936923632 9.70719861515534 9.48218000449087 9.84153595874492 9.59979856555348 9.79374703247872 8.49437093432272 0.148342027356052 0.138845099432421 0.140453504140165 0.135916080882951 0.136238516279822 0.141086770821568 0.134030648730122 0.141470924006742 0.147684266534422 0.140213703171148 0.142170150725162 0.140198168229271 0.134332109185713 0.138830219470371 0.133918721070158 0.135987216395622 0.135581202866229 0.135157277859048 0.149623534934680 5 5|0 +|/ 15919013 15919819 15919415.9 15918907 15920098 + gene protein_coding_gene TRUE TRUE AT5G39730.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related similar to avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related [Arabidopsis thaliana] (TAIR:AT5G39720.1); similar to Os06g0702700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058493.1); similar to Os02g0141000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045856.1); similar to hypothetical protein CHGG_02445 [Chaetomium globosum CBS 148.51] (GB:XP_001228961.1); contains InterPro domain AIG2-like; (InterPro:IPR009288) 0.0869094006205007 0.929518758342818 0.373340668357416 1 0.466429936049153 18.9930938307952 0.0869094006205007 0.0804560537102297 AT5G05990_at 3.40148604562841 4.19414550546614 4.17327051172562 4.62222467708561 4.24557568976759 4.20114379281501 3.80578505903896 4.21451161403504 2.68456504700599 3.2958675078143 3.93817398317000 4.30665882041038 3.69069929102314 3.5149419216555 4.83990360470088 4.34753296448412 3.9908561725591 3.55086631368979 3.77953521058566 0.241141768404662 0.236085921243178 0.242935299516412 0.236482818916462 0.232416478054736 0.236666601285755 0.232256844802836 0.242769546995038 0.238642195546210 0.232256844802836 0.236037031611592 0.237967209477657 0.232256844802836 0.240347562109141 0.245201445568880 0.236687408708327 0.252344946934765 0.245453623881084 0.234387462059122 5 5|0 -|/ 1806933 1807497 1807195 1806762 1807908 - gene protein_coding_gene TRUE TRUE AT5G05990.1 mitochondrial glycoprotein family protein / MAM33 family protein similar to mitochondrial glycoprotein family protein / MAM33 family protein [Arabidopsis thaliana] (TAIR:AT3G55605.1); similar to Os01g0143800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042000.1); similar to Os01g0143300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041996.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB16469.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428) -0.12328045264936 -0.92915318442918 0.37352153131281 1 0.466112135749465 7.74515622316043 -0.12328045264936 0.172959496696451 AT5G53560_at 10.9368681465186 10.9951884604738 11.7348740137889 11.6595630336060 11.8714715775443 11.4969810784338 11.2784369787278 11.2392365373261 11.0111434896788 10.9487560527892 11.8566295465650 11.7824154169015 11.668698960915 11.6395831501714 11.9035124956166 11.5667673058435 11.1959374595963 11.9041747947207 11.0487229414145 0.0788176247326818 0.0783995536361164 0.0766234827248457 0.0764378392290695 0.0762261617199644 0.084265313676236 0.0752758354536412 0.0754146061542556 0.079373968841702 0.0738306357440398 0.0727447307006059 0.0727700148752263 0.0731001004119323 0.0748937114350535 0.0755745614801924 0.0736706463488286 0.0875102210000556 0.0792643123018179 0.0733447208870416 5 5 + 21776918 21777549 21777355.545 21776593 21777804 + gene protein_coding_gene TRUE TRUE AT5G53560.1 ATB5-A (Cytochrome b5 A) Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. Identical to Cytochrome b5 isoform 1 [Arabidopsis Thaliana] (GB:Q42342;GB:Q9SB05); similar to B5 #4 (cytochrome b5 family protein #4), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G32720.1); similar to Cytochrome b5 (GB:P40934); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) 0.082901838613923 0.926703461556635 0.374735104345882 1 0.463985248774525 22.7478720045951 0.082901838613923 0.0672140418463833 AT5G59260_at 1.85534041992521 1.96314715125015 1.88998246111001 1.86698374883393 1.65260924708550 1.8907807196588 1.46956249625853 1.38296351389939 1.57864117412605 1.38259134377442 1.45640517148043 1.62226191164124 1.92748280558097 1.48848679019313 1.32965830205411 1.94920556415421 1.48148391837776 1.41088529538559 1.98528803885146 0.188782921881350 0.194159322115384 0.196741903515594 0.193927192903122 0.193714904784536 0.198998667167978 0.193569763252661 0.193781257391562 0.198169656677692 0.191124123450849 0.198392485159393 0.193702269880896 0.193047067224447 0.193111821973277 0.192297112392005 0.193913933776331 0.198199877817368 0.193811418741361 0.195133800461676 5 5 - 23925129 23925629 23925385.455 23925127 23927151 - gene protein_coding_gene TRUE TRUE AT5G59260.1 lectin protein kinase, putative similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G59270.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.0784124559945514 -0.926696847912392 0.374738384471387 1 0.463979513078273 3.36245817247389 -0.0784124559945514 0.0478258304144396 AT5G49370_at 0.965948882539766 0.883069003554615 1.09335095175116 0.972716567859578 0.428800895045472 1.04820956075503 0.964437525405221 1.25386638340242 1.09991490659505 1.17759493075956 1.49309792499804 1.33364331760121 0.796500692305818 1.12634312315047 1.02106833123767 1.10779040315526 1.17729599945246 1.23594430400048 1.00879704332463 0.181615951982634 0.169708626376574 0.173622757035754 0.175365990077687 0.172216224622436 0.182149698827132 0.170061412881898 0.177055268218439 0.173647656626513 0.173291498562747 0.175053300892328 0.178200465738691 0.180026158785437 0.176555438095146 0.176626876422007 0.182692477969839 0.171631832331766 0.176579152947070 0.175095713179451 5 5|0 +|/ 20041237 20041727 20041527.444 20041228 20041756 + gene protein_coding_gene TRUE TRUE AT5G49370.1 hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism similar to binding / hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism [Arabidopsis thaliana] (TAIR:AT3G06670.1); similar to Protein of unknown function DUF625 [Medicago truncatula] (GB:ABE83194.1); contains InterPro domain ATPase, F1 complex, gamma subunit; (InterPro:IPR000131) -0.100736893587811 -0.92619621667064 0.374986738323616 1 0.463545439275269 2.07974804072953 -0.100736893587811 0.120997005289907 AT5G17960_at 1.03451877860336 0.864403674062245 1.05284656822189 1.12327895453446 0.772111188821555 0.580567008599073 0.619486777293046 0.737817651695659 0.897224759989094 1.00977953249580 0.599096155826361 0.923769405209822 0.799359099386456 1.10610580796899 0.74927536036114 0.875117833461489 1.15198285368133 0.884808207296895 1.06667129406099 0.198659803571066 0.196193828224315 0.198830894769789 0.204143521473268 0.198030730676889 0.196193828224315 0.197686125206604 0.202786450000511 0.198441794621052 0.203449399366245 0.211719777705501 0.196193828224315 0.202266781885438 0.204960480795499 0.203839804869564 0.200361778088400 0.196812410590248 0.206126183234589 0.196395697365581 5 5 - 5945679 5946192 5945902.636 5945667 5947466 - gene protein_coding_gene TRUE TRUE AT5G17960.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G17600.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G11390.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G13760.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.0788665925284108 -0.926068423487625 0.375050152829237 1 0.463434667333562 1.78683609318609 -0.0788665925284108 0.0503322100228236 AT5G04310_at 2.71109540258365 2.34670971983948 2.47857618232467 2.20805335247374 2.63492044649452 2.67793794452316 2.16597583379095 2.35695317317943 2.64702173139227 2.68789255798230 2.99351540245727 3.28329645824507 2.54228342710301 2.91508518899708 3.09394815155389 2.90427418173190 2.8681734039981 3.20379179147321 2.56023783613794 0.152486939252123 0.150731427311416 0.147733648262107 0.154637529733704 0.155100658981323 0.15335947387707 0.153307026382242 0.155644113827971 0.154902656046549 0.154458671739407 0.154572266691524 0.157238755571270 0.154224392070722 0.150736099464303 0.150978759578732 0.150491719531459 0.148636482983294 0.150476567834085 0.150207557163529 5 5|0 -|/ 1203359 1206258 1204411.211 1203204 1207353 - gene protein_coding_gene TRUE TRUE AT5G04310.1 pectate lyase family protein similar to PMR6 (POWDERY MILDEW RESISTANT 6), lyase/ pectate lyase [Arabidopsis thaliana] (TAIR:AT3G54920.1); similar to pectate lyase-like protein [Brassica napus] (GB:AAQ87025.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -0.0880458666591938 -0.924973232551215 0.375593928415221 1 0.462485874693572 5.25115944483409 -0.0880458666591938 0.0855321475016005 AT5G18230_at 8.30631417876203 8.33423228561808 9.22190385125612 9.05916394507471 9.46140991940557 8.98674265350012 8.74246244339484 8.40838045492472 8.28284374998992 8.45417706115481 9.05232012590191 9.20139623097682 9.10301393619805 9.3065468691523 8.97860665526114 9.19645171897203 8.79970637564435 9.06431514157874 8.47177284275436 0.134695571931590 0.128671369092142 0.134408287278919 0.135883573845092 0.130932881968291 0.131592981411292 0.136145449682614 0.130019317766129 0.144134374113698 0.129329410714079 0.128294521804419 0.127314415341209 0.128578242981403 0.130944726730468 0.129247364566752 0.129655870766694 0.143900444319861 0.132650817196421 0.130366052416625 5 5|0 -|/ 6021805 6022443 6022250.8 6021446 6027251 - gene protein_coding_gene TRUE TRUE AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07705.2); similar to Os03g0652100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050795.1); similar to Not1 N-terminal domain, CCR4-Not complex component family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF97930.1); contains InterPro domain Not CCR4-Not complex component, N-terminal; (InterPro:IPR007207); contains InterPro domain NOT2/NOT3/NOT5; (InterPro:IPR007282) -0.0943786320304585 -0.924653400251425 0.375752834321729 1 0.462208973299084 17.5604391413305 -0.0943786320304585 0.104434365478988 AT5G59040_at 2.50761809820436 1.81742046831203 2.54062310546769 2.33454100701714 2.19511114591903 2.12846855614287 2.30105373976614 2.31629952909175 2.01932165807226 2.01134197101703 2.53249061356761 2.39706018877846 2.07048136051539 2.25966740120874 1.90340492951502 2.44354639392545 2.54213080157453 2.64558111978859 2.49295273104726 0.196194825901976 0.193641846411881 0.197661718749958 0.195214470903545 0.193641846411881 0.198168241503273 0.199642902663065 0.197336801048567 0.197545390420597 0.199866025529783 0.199450934425361 0.199276148905294 0.199228965363910 0.19899878572257 0.194791717356497 0.201286419859471 0.203540458889856 0.199335261020847 0.205556914276313 5 5 + 23853954 23854347 23854174.727 23853912 23854485 + gene protein_coding_gene TRUE TRUE AT5G59040.1 COPT3 (Copper transporter 3); copper ion transporter encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast similar to COPT2 (Copper transporter 2), copper ion transporter [Arabidopsis thaliana] (TAIR:AT3G46900.1); similar to copper transporter, putative [Arabidopsis thaliana] (TAIR:AT2G26975.1); similar to Os01g0770700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044379.1); similar to putative copper transporter protein [Oryza sativa (japonica cultivar-group)] (GB:BAB56072.1); contains InterPro domain Ctr copper transporter; (InterPro:IPR007274) -0.102063559566294 -0.923207462741816 0.376471829848546 1 0.460958126283581 4.52955902515083 -0.102063559566294 0.125212705353466 AT5G10420_at 1.23425158629049 1.25011274869081 1.58905763949757 2.07645184928385 1.61805434466011 1.40320475313995 1.39176853393533 1.77964556469340 1.61275247695814 1.20522405585314 1.63619256991269 1.62920717688021 1.8560506457172 1.18600481780986 1.82508822096516 1.52348618768290 1.59428879621466 1.83774379928041 1.61883190778783 0.259237825278631 0.257342262769472 0.271546588474235 0.265661350392690 0.262349653929210 0.263440599479748 0.256859662975455 0.261724632735961 0.265810205204318 0.258500872058462 0.256859662975455 0.256859662975455 0.26262788895491 0.258588916065793 0.263884059835144 0.261987425652365 0.259617806592409 0.269090924654074 0.258755963229694 5 5|0 -|/ 3274004 3275154 3274414.778 3273554 3276491 - gene protein_coding_gene TRUE TRUE AT5G10420.1 antiporter similar to ripening-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT5G65380.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G44050.1); similar to 117M18_23 [Brassica rapa] (GB:AAZ66942.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 0.0975464405867287 0.921183096649356 0.377480084676543 1 0.459209656209839 3.10029033936107 0.0975464405867287 0.114060436590669 AT5G18200_at 5.10129041024433 5.85860925099056 6.2496283298597 6.860883605411 7.79864277109037 7.03932847065957 5.81588162475247 5.79765866374838 4.96610006704707 4.86981298112116 6.03990334195219 6.0960054961271 5.64452096463658 6.19566982091362 5.31664367764916 5.84920508658343 6.07978814506153 6.13476810628956 4.99173743376173 0.252550085828540 0.254700361850673 0.274212721181834 0.263578933431035 0.262755870726676 0.264198666441923 0.26535805585979 0.260405517525552 0.272616979177580 0.265698261434225 0.258003323548775 0.252550085828540 0.259376620832158 0.261169849889049 0.266981453275573 0.252550085828540 0.272676504122204 0.257711281439653 0.266415539844604 5 5 + 6015957 6016499 6016237.545 6015229 6016784 + gene protein_coding_gene TRUE TRUE AT5G18200.1 UDP-glucose:hexose-1-phosphate uridylyltransferase Identical to Probable galactose-1-phosphate uridyl transferase (EC 2.7.7.12) (Gal- 1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) [Arabidopsis Thaliana] (GB:Q9FK51;GB:Q8LB75); similar to galactose-1-phosphate uridyltransferase [Cucumis melo] (GB:ABD98821.1); contains InterPro domain Galactose-1-phosphate uridyl transferase, class I; (InterPro:IPR001937); contains InterPro domain Galactose-1-phosphate uridyl transferase; (InterPro:IPR011573) 0.141343856144174 0.921052949009452 0.377544971187995 1 0.459097356402076 11.7462970111170 0.141343856144174 0.213640529339903 AT5G49840_at 7.79642060416337 7.78191628088143 9.0534033205199 9.01185962342602 9.45218090241186 8.7268258167386 8.74864145053708 8.24302950746449 7.12903700655088 7.89638600090657 8.06349269547816 8.36828009472124 8.45579283998986 8.15273047985632 8.08122412529796 8.70732008044146 8.16714884494771 7.98137657706118 7.91216911836561 0.177130383103515 0.18375284684758 0.199989153836593 0.183432133281466 0.191759453705123 0.195629447920438 0.182381640687767 0.181424756545862 0.200101660868684 0.183202902477454 0.182002633116767 0.176762307957708 0.185000931252532 0.195399522909591 0.185401904789288 0.183241905847963 0.195888764152024 0.188781989168266 0.183244349095812 5 5|0 +|/ 20275010 20276057 20275484.889 20272469 20276261 + gene protein_coding_gene TRUE TRUE AT5G49840.1 ATP-dependent Clp protease ATP-binding subunit ClpX, putative similar to ATP-dependent Clp protease ATP-binding subunit ClpX, putative [Arabidopsis thaliana] (TAIR:AT1G33360.1); similar to putative ATP-dependent Clp protease ATP-binding subunit ClpX1 (CLPX) [Oryza sativa (japonica cultivar-group)] (GB:BAD15818.1); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain ClpX, ATPase regulatory subunit; (InterPro:IPR004487); contains InterPro domain AAA ATPase; (InterPro:IPR003593) -0.113338954951473 -0.920271958938161 0.377934507782261 1 0.458423747734775 16.5483020678505 -0.113338954951473 0.153201736313999 AT5G02460_at 1.41144860675434 1.32719768440262 0.916937884405317 1.40141835365372 1.68804336185159 1.09265831353228 1.6102647648556 1.60611622554417 1.15575735234414 1.44306868821842 1.67183716558373 2.44110843015247 2.10472537340737 1.67388445717292 1.98968987687149 1.98234624871766 1.85173441213294 1.67502894350247 1.27560017263278 0.215688784578529 0.223354470666993 0.22323164980005 0.223039851501311 0.226204487933727 0.23129662315739 0.222016920386353 0.222124278511478 0.225848271117363 0.226168673982779 0.220550403435477 0.215373061294297 0.220920444727832 0.216157614563659 0.238378352087658 0.221898358329694 0.221013115425454 0.231345576484555 0.222742480597529 5 5 - 539556 540111 539833.818 539247 541110 - gene protein_coding_gene TRUE TRUE AT5G02460.1 Dof-type zinc finger domain-containing protein Identical to Dof zinc finger protein DOF5.1 (AtDOF5.1) (DOF5.1) [Arabidopsis Thaliana] (GB:Q9LZ56); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37590.1); similar to Zinc finger, Dof-type [Medicago truncatula] (GB:ABE94576.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) 0.104863528945689 0.918081716390906 0.379028455269055 1 0.456537213509974 2.98939553329549 0.104863528945689 0.133635866948991 AT5G06920_at 1.10863937338195 0.973858451993665 1.35360457298179 1.74157794758238 0.963904057371776 0.967557194327717 1.10222779371635 1.13541593000041 1.21248014901912 1.28506525303050 1.53805966994535 1.16430321784913 0.588983735213675 1.11605285942530 0.872433685262971 1.3096180034508 1.37068968332025 1.02943707962611 1.43387313779079 0.226283117734658 0.224233396661516 0.225197427649342 0.236471993917583 0.230068435120808 0.230512547776104 0.226133575957352 0.228877811754339 0.237603808037258 0.232157961461667 0.224881814224967 0.224233396661516 0.225007131154821 0.226748959856859 0.242539336182345 0.224233396661516 0.248439241933202 0.228687606171204 0.224233396661516 5 5 + 2143336 2143893 2143557.182 2142859 2143920 + gene protein_coding_gene TRUE TRUE AT5G06920.1 FLA21 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 21 PRECURSOR) Identical to Putative fasciclin-like arabinogalactan protein 21 precursor (FLA21) [Arabidopsis Thaliana] (GB:Q9FL53); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15190.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -0.0831797878567607 -0.917591525574528 0.379273593679549 1 0.456115512487767 2.38543320935709 -0.0831797878567607 0.0713111285772673 AT5G56790_at 4.77872116374614 5.40835200617342 5.81093202477462 5.51490141295828 6.79598465028099 6.3300034981628 4.94583796045046 5.528528085325 5.08608038749725 5.23203617281458 6.16635705940862 6.9353314171907 6.49316094791787 6.60854257909752 6.22158417504601 6.60181317548805 5.98513322590622 6.52131638795892 5.08451326921081 0.27002845374111 0.258994567394758 0.273174089364172 0.2616351959418 0.259071599317085 0.257836119348737 0.265515687351595 0.255256060026979 0.283738953699466 0.256285650828568 0.259269184450273 0.259099392315185 0.259020920053731 0.261833214651950 0.266188299576461 0.261410211473235 0.266639497483268 0.267446696178250 0.260828593812981 5 5|0 +|/ 22987733 22988442 22988089.333 22985165 22988762 + gene protein_coding_gene TRUE TRUE AT5G56790.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G13690.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G55200.1); similar to Os01g0602800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043500.1); similar to dual-specific kinase DSK1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52649.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.123294857792770 0.917007656018544 0.379565725584859 1 0.455613468895632 11.4270900073219 0.123294857792770 0.176544201641581 AT5G12250_at 9.15706932820328 9.31404652007457 9.15476859324446 9.44840726795884 9.72969357348705 9.51772243995575 9.29177216949225 9.63888843724129 9.48408709649493 9.6398657481056 10.8743036874516 10.9603143359224 10.5334597343575 10.8357824884871 10.960175539171 10.5800533874392 10.2711990070566 10.7459705423576 9.79033207587236 0.109355864688488 0.112895284929743 0.112988525434382 0.109141598897229 0.113491455680201 0.116080969729657 0.108081894816479 0.115185696106180 0.123568816786442 0.123944216851012 0.112487842616922 0.112347348613877 0.109828940434911 0.112506650644864 0.112417605687376 0.111966747251167 0.116429653650944 0.111398889936261 0.108307148239714 5 5 - 3961366 3961892 3961587.909 3961107 3963523 - gene protein_coding_gene TRUE TRUE AT5G12250.1 TUB6 (BETA-6 TUBULIN) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment. Identical to Tubulin beta-6 chain (Beta-6 tubulin) (TUBB6) [Arabidopsis Thaliana] (GB:P29514); similar to TUB3 (Tubulin beta-3), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62700.1); similar to TUB2 (Tubulin beta-2), structural molecule [Arabidopsis thaliana] (TAIR:AT5G62690.1); similar to TUB8 (tubulin beta-8) [Arabidopsis thaliana] (TAIR:AT5G23860.1); similar to tubulin B4 [Glycine max] (GB:AAX86048.1); similar to beta tubulin [Setaria viridis] (GB:CAE52516.1); similar to beta-tubulin R1623 - rice (GB:JC2510); contains InterPro domain Tubulin/FtsZ, GTPase; (InterPro:IPR003008); contains InterPro domain Tubulin/FtsZ, C-terminal; (InterPro:IPR008280); contains InterPro domain Beta tubulin; (InterPro:IPR002453); contains InterPro domain Tubulin; (InterPro:IPR000217) -0.0887465887722816 -0.91423352461016 0.380955895296919 1 0.453231792429136 19.5856721980929 -0.0887465887722816 0.0909627357694633 AT5G09320_at 5.37923184136506 5.75564692093971 6.06607844803746 6.10146385588575 6.83983329937706 6.6016123197181 5.29093512708215 5.79681939745590 4.72521234245062 4.36756797497653 5.36292635684705 5.07099770128261 5.93139330639885 5.82587472463562 5.24083697568469 5.45245056427271 5.67205125448196 5.34794959689508 4.59484168151577 0.235579890218777 0.228257364949549 0.228750004412419 0.239587196932818 0.241341281014942 0.243920418603013 0.226202494867767 0.231493591193658 0.232804065842101 0.231808470738297 0.223050286647465 0.226300291319422 0.228998983896069 0.227275867438275 0.225207035990812 0.223050286647465 0.229550423406185 0.228968561702277 0.231105155496437 5 5 - 2889152 2889600 2889416.091 2888656 2892017 - gene protein_coding_gene TRUE TRUE AT5G09320.1 vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein similar to vacuolar sorting protein 9 domain-containing protein / VPS9 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19770.1); similar to Vacuolar sorting protein 9 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95105.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Vacuolar sorting protein 9; (InterPro:IPR003123) -0.0978183989229588 -0.914023217826748 0.381061430034460 1 0.453051485501575 11.0042530144210 -0.0978183989229588 0.116809791834599 AT5G19280_at 5.95879493157334 5.92313138811157 7.10509411915972 7.03011056778924 6.86767076785989 7.01128880750887 6.01511429451782 5.84167882146647 5.77871408124149 5.62006707972697 6.78433982662906 6.68769239594145 6.3008080433468 7.01751779623514 6.48018352390545 6.84502995339069 6.82992341329545 6.53152509509662 6.04543379849765 0.189439169905327 0.185001501189309 0.189228796759285 0.190439785016831 0.187325814673085 0.206418620113441 0.197187710187335 0.189380462322865 0.192557021707776 0.187445687690663 0.186290009228603 0.187278163091753 0.197002465964414 0.195753198650637 0.191474952481432 0.187704394858131 0.204251354820537 0.200109177816886 0.203268181301411 5 5|0 +|/ 6491743 6493159 6492405.25 6488321 6493441 + gene protein_coding_gene TRUE TRUE AT5G19280.1 KAPP (Kinase-associated protein phosphatase); protein phosphatase type 2C kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region Identical to Kinase-associated protein phosphatase (EC 3.1.3.16) (KAPP) [Arabidopsis Thaliana] (GB:P46014); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G31750.1); similar to kinase-associated protein phosophatase [Brassica oleracea] (GB:CAD20349.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) -0.0760983140378577 -0.913003438914253 0.381573460494477 1 0.452177671823873 12.7187933751494 -0.0760983140378577 0.0415332728763604 AT5G15000_at 1.07247418957196 1.33248039379516 1.44277044997936 1.83429855130123 0.96120018789732 1.52914244836446 0.84689999714919 0.928940074944556 1.18908490769648 0.911991848492999 0.718561396332566 0.777203445696824 0.868987292058845 1.41269697035357 1.21551480419626 0.841602638310342 0.999087064581483 1.50745798934611 1.15134137757973 0.260549740710087 0.255347256299998 0.267009829121219 0.262411012245489 0.255347256299998 0.266605214732406 0.256095277132127 0.255347256299998 0.266189009341943 0.255347256299998 0.266539034523379 0.255347256299998 0.271871011489389 0.255347256299998 0.263930667263167 0.258332981214476 0.265366950656325 0.279305485384846 0.261846287119524 5 5 + 4854893 4855140 4855015.571 4854878 4855174 + gene protein_coding_gene TRUE TRUE AT5G15000.1 Encodes a ECA1 gametogenesis related family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G14995.1) 0.102170411246314 0.912965271327399 0.381592633814637 1 0.45214498328551 2.30691495064169 0.102170411246314 0.128362527372097 AT5G45820_at 9.87883370487572 9.9890371935721 10.9124591924958 10.9522253442369 11.2636060479393 10.9500220668690 11.0599963684428 11.1029274509397 10.5019246877822 10.7215571511842 11.6163372293713 11.4308478158760 11.4254113578406 11.5925632732197 11.2403671858919 11.7346452429002 11.3132787610344 11.3700169883077 10.7086477230108 0.089165141352822 0.0865834181227457 0.0926731653940108 0.0907419013250137 0.0886938290014895 0.096670593319412 0.087702588753441 0.0886478417881446 0.0983761237267938 0.0882910549934876 0.0876712082118113 0.0865834181227457 0.0883199684678625 0.0880345009560191 0.0873656194831773 0.0865834181227457 0.0918437449990147 0.0894774314669119 0.0890978769774027 5 5 - 18604377 18604880 18604710.455 18604209 18605770 - gene protein_coding_gene TRUE TRUE AT5G45820.1 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. similar to CIPK10 (CBL-INTERACTING PROTEIN KINASE 10), kinase [Arabidopsis thaliana] (TAIR:AT5G58380.1); similar to CBL-interacting protein kinase 11 [Populus trichocarpa] (GB:ABJ91218.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0793075681799389 0.910644955891814 0.382759507325171 1 0.450159919242424 21.8183767557369 0.0793075681799389 0.0584054098141412 AT5G07850_at 1.30384543246984 1.22348468830818 1.24158041161973 1.26183868318111 1.48345671794421 1.10998625861815 1.11759537611078 1.59688640104279 1.17330770103321 1.49078901063427 0.957288197527642 1.43501347673569 1.18074331984697 1.63432411153436 1.28243122873086 1.09503703139833 1.31968973730996 2.09004413383514 1.37902110666532 0.220142093725988 0.222312830870274 0.218145225528629 0.222442385120361 0.222560610672219 0.21853783821914 0.221842402777991 0.218145225528629 0.223803866860775 0.227206799355780 0.218145225528629 0.219431473306426 0.218145225528629 0.222124934826091 0.218145225528629 0.218659590269674 0.232939070936307 0.225808115397556 0.228184593474020 5 5 + 2509936 2510468 2510109.455 2508918 2510504 + gene protein_coding_gene TRUE TRUE AT5G07850.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G42830.1); similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07870.1); similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07860.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.0932253335322136 -0.907512555281881 0.384338747619816 1 0.447486867022637 2.65334791819142 -0.0932253335322136 0.106124750311253 AT5G47420_at 6.22798769338717 6.9424034244851 7.523118502138 7.87076552553587 7.55842404977578 6.73072356433659 5.23954536304555 5.11074090633097 4.58245519412837 5.12963517780794 5.56042922287278 6.12382787105494 5.51398021805257 5.95006240223128 6.03830030312285 5.88102817641966 5.21212133965182 5.83298508271807 5.2245628130884 0.275900047308657 0.268080514031695 0.268080514031695 0.272464748150219 0.268080514031695 0.281672380106275 0.268080514031695 0.272848637711424 0.293764174336903 0.282326088964501 0.279026313950327 0.268080514031695 0.268080514031695 0.283444360333033 0.27606473918122 0.269425392128235 0.293583359103556 0.278970323970822 0.27245321957337 5 5|0 +|/ 19250934 19251848 19251419.625 19250063 19252286 + gene protein_coding_gene TRUE TRUE AT5G47420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17420.1); similar to hypothetical protein 31.t00054 [Brassica oleracea] (GB:ABD65092.1); contains InterPro domain Protein of unknown function DUF124; (InterPro:IPR002838) 0.132667783322745 0.907199424678552 0.384496867466900 1 0.447220082836859 12.0219517396412 0.132667783322745 0.199795860471989 AT5G51550_at 8.95567584234509 9.47871321987315 8.81228390598587 9.22189359852756 10.1497414188157 9.67553155686985 9.35277633419591 9.38373012694842 9.54765425533275 9.26706658748964 11.2649082955985 10.3890135730313 10.4946523669987 10.9005436433588 10.2521505680951 10.1503852510430 9.34220273351667 10.2462156310946 9.26388199056026 0.116759187866757 0.113003204325439 0.123044650730272 0.118671501647002 0.116085081994903 0.132060557733573 0.112472363772478 0.112833018626673 0.121644440363381 0.123269778961267 0.113895934126513 0.112241742236157 0.112208149234639 0.122515348709785 0.113926168062011 0.113814565242254 0.121604694814338 0.115275157571789 0.120306928916908 5 5 - 20957041 20957590 20957345.727 20956720 20958121 - gene protein_coding_gene TRUE TRUE AT5G51550.1 phosphate-responsive 1 family protein similar to phosphate-responsive 1 family protein [Arabidopsis thaliana] (TAIR:AT2G17230.1); similar to unknown [Sorghum bicolor] (GB:AAQ06267.1); contains InterPro domain Phosphate-induced protein 1 conserved region; (InterPro:IPR006766) -0.106745271828211 -0.907082690304138 0.384555825859001 1 0.447120646203322 19.2485648932634 -0.106745271828211 0.141353071567231 AT5G15180_at 1.56562468874119 1.62588853885667 2.23545825835490 1.98003847891120 1.19326624366326 1.93737231116811 1.18587806625173 1.51375943693317 2.30019953204629 1.92554366709449 1.7180703866155 2.19478774761015 1.49142143797863 1.46461688649174 1.53401279967530 1.86290039859514 2.13901051540191 2.15148618541175 2.12989682630549 0.215264661061645 0.213246160869289 0.223102527751517 0.220100188642822 0.217738101099496 0.21691370164189 0.218700932670275 0.224377724259789 0.21716036088065 0.221984365144159 0.216335477585497 0.214687699591993 0.215267346866252 0.212966159631700 0.215103622831058 0.218206807129810 0.215889346738585 0.216038112665122 0.213594264750932 5 0|5 /|+ 4931425 4932094 4931716.2 4930522 4932345 + gene protein_coding_gene TRUE TRUE AT5G15180.1 peroxidase, putative Identical to Peroxidase 56 precursor (EC 1.11.1.7) (Atperox P56) (ATP33) (PER56) [Arabidopsis Thaliana] (GB:Q9LXG3;GB:Q41955); similar to peroxidase 27 (PER27) (P27) (PRXR7) [Arabidopsis thaliana] (TAIR:AT3G01190.1); similar to peroxidase [Spinacia oleracea] (GB:CAA76374.2); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.109212555841367 -0.905073640683046 0.385571519108248 1 0.445410992888353 3.62370323779567 -0.109212555841367 0.147865162618700 AT5G64800_at 3.48464128546747 3.68738683556151 4.31759027236509 4.55150131967627 4.47389989104423 4.18681632693743 3.22233816087605 3.12606331429949 2.88771775111434 3.16745111368139 3.50416466101982 3.52767851005041 3.65277906545456 3.47999914285915 3.03514978721256 3.76287078395084 3.72016957220299 3.66187291080180 3.29306344253347 0.232184511526588 0.232184511526588 0.249415257470250 0.251114856890710 0.238957906873913 0.241285955426446 0.235670522446282 0.232184511526588 0.236269590446897 0.233064535469421 0.236695646220185 0.233654525354808 0.233502521584540 0.232960822530664 0.232184511526588 0.232184511526588 0.236346437617901 0.232881909846807 0.232184511526588 5 5 + 25923314 25923599 25923467.091 25923309 25923629 + gene protein_coding_gene TRUE TRUE AT5G64800.1 CLE21 (CLAVATA3/ESR-RELATED 21); receptor binding Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. 0.0829919270614466 0.904555121765146 0.385833965932452 1 0.44497026593923 7.21086117076365 0.0829919270614466 0.0749360575081603 AT5G35250_at 1.20306342369296 1.33694273813742 1.75955585975803 2.02005388472574 1.19918426286313 1.30776625392278 1.08697506256190 1.51872846710889 1.78274700196887 2.07251602862176 1.58984613970146 1.54435772382401 1.37197673322842 1.86251172773267 1.93990877608188 1.67125150648952 1.72374531527228 1.84290927369648 1.90685013451079 0.169647231239162 0.188974062439133 0.166427297329588 0.173413931508493 0.161409011521175 0.166041679583323 0.166753456993150 0.167216809477027 0.168439395332085 0.162199661097790 0.166672704440098 0.169573741760101 0.164907727372336 0.161320717234411 0.165124238610737 0.163918104610694 0.168871845411258 0.173338515172435 0.171021003402733 5 0|5 /|+ 13520943 13520955 13520949.833 13518715 13521002 + gene protein_coding_gene TRUE TRUE AT5G35250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G07450.1); similar to hypothetical protein 31.t00031 [Brassica oleracea] (GB:ABD65118.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.0881050773497423 -0.903457056740346 0.386390161246503 1 0.444037645751977 3.2360426380316 -0.0881050773497423 0.0922210792535786 AT5G41680_at 1.36457487360395 1.65168960203851 1.99000533605151 2.15426507920183 1.54467329322042 1.89898893280080 1.40694186002048 1.83778034152597 1.83424730875730 1.67687262355168 1.77652226614911 1.59569049124450 1.75629412829751 1.88787807751593 1.89703038801608 1.53296275998504 1.89541908602635 1.60433451526420 1.37803581319169 0.203667544349542 0.199509564681585 0.206352535813767 0.197501658781105 0.203371965972517 0.198761176798283 0.207674312455262 0.198327521744718 0.202871345416679 0.218150351643112 0.197501658781105 0.201878902532245 0.208030331259779 0.203130322258486 0.201956058512626 0.204591373400761 0.210772905246195 0.197501658781105 0.206304572393883 5 5 + 16685882 16686360 16686114.818 16685113 16686717 + gene protein_coding_gene TRUE TRUE AT5G41680.1|AT5G41680.2 protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G64210.1); similar to putative receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAA94519.1); similar to Os01g0223600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042446.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.09494886522959 0.902982218955588 0.386630851296114 1 0.443634648314573 3.41760743775588 0.09494886522959 0.112229318472944 AT5G52840_at 9.79443014574332 9.81997200515898 10.3464475351615 10.3889675413127 10.0888205249350 10.0632858428393 9.92539595880802 9.95698764092976 9.38033879011901 9.66185204498073 10.3077089087021 10.4222132806908 10.1220469292828 10.4110359717760 10.6435998930808 10.2761043264088 10.0532919250789 10.2387439630102 9.34664759347882 0.0927382416308848 0.0927382416308848 0.0987674858656065 0.0954482252007767 0.0986739317758605 0.113555272950437 0.0956107665803504 0.0938653156295471 0.110921269305578 0.101327104688810 0.09764001698444 0.0929841145407804 0.0961147974189408 0.0951876739106755 0.0988184172341351 0.0927382416308848 0.099976618959609 0.0983749781762519 0.104990944317791 5 5 + 21430946 21431990 21431455.455 21430872 21432232 + gene protein_coding_gene TRUE TRUE AT5G52840.1 NADH-ubiquinone oxidoreductase-related Identical to Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) [Arabidopsis Thaliana] (GB:Q9FLX7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28005.1); similar to NADH-ubiquinone oxidoreductase [Retama raetam] (GB:AAL32032.1); contains InterPro domain ETC complex I subunit; (InterPro:IPR006806) -0.0718937724985245 -0.902805095159971 0.386720660261524 1 0.443484368281201 19.9341830456677 -0.0718937724985245 0.0110949390861487 AT5G38750_at 0.9064990563575 0.6270584622682 0.958094511337896 0.766976506487471 0.653077979247983 0.781243521397094 0.654688000460649 0.758895058700862 0.802723154334655 0.520153847725089 0.787258588968972 0.497259375291691 1.11313052307212 0.727871524418684 0.876043807288886 0.739407936081038 0.86244488535511 1.08749325170966 0.538021868315138 0.173437102245445 0.171824583689368 0.176826371921366 0.174220286666735 0.176566659319357 0.179675051334252 0.188990152608946 0.172176032789141 0.173530537474633 0.185463854901648 0.173629118083291 0.174825125595232 0.185601101026476 0.17981314950112 0.172532067194682 0.174060932467671 0.171824583689368 0.180278046275251 0.177422390593782 5 5|0 +|/ 15539885 15540384 15540124.9 15539880 15540410 + gene protein_coding_gene TRUE TRUE AT5G38750.1 asparaginyl-tRNA synthetase family similar to EMB2755 (EMBRYO DEFECTIVE 2755), ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G56680.1); similar to Os01g0372700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043066.1); similar to Aspartyl-tRNA synthetase, class IIb; tRNA synthetase, class II (D, K and N) [Medicago truncatula] (GB:ABE91972.1) 0.0802425098673001 0.90271230873663 0.386767712575985 1 0.443405653938321 1.49164831702299 0.0802425098673001 0.065188718982712 AT5G38510_at 9.55666241332286 9.80895299655906 10.8550272610781 10.7446657281113 10.990901241446 10.7081668293198 10.5413210433703 10.4231858829613 9.75971522994292 9.76222726255939 10.3356055188014 10.0733389013642 10.6011637606967 10.7745581567556 9.94613778360048 10.5497880591265 10.2765451613269 10.5168107532258 9.50167615311527 0.128888216568117 0.12495433392646 0.132007275861088 0.129996423144822 0.127678818968392 0.13350507074684 0.131699372329685 0.125323906492745 0.139379787251438 0.131846419108917 0.127475250932326 0.133540974755622 0.129171916606504 0.125149901072073 0.129680569916364 0.128611607437467 0.133613467921586 0.12495433392646 0.135013696828404 5 0|5 /|- 15435087 15436052 15435293.5 15434963 15437836 - gene protein_coding_gene TRUE TRUE AT5G38510.1|AT5G38510.2 rhomboid family protein similar to rhomboid family protein [Arabidopsis thaliana] (TAIR:AT1G12750.2); similar to Predicted inosine-uridine preferring nucleoside hydrolase (ISS) [Ostreococcus tauri] (GB:CAL53978.1); similar to Os02g0326700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046708.1); contains InterPro domain Rhomboid-like protein; (InterPro:IPR002610) 0.0818014491647698 0.90243570125945 0.386908004946777 1 0.443171037651401 20.4830019547218 0.0818014491647698 0.0712945037938811 AT5G02590_at 2.90675244835607 3.33085765446072 3.65483861635862 3.80228319200452 3.10432979359279 3.2255790178009 3.42065100284763 3.71216409409326 3.57895502165102 2.69119770667493 3.90451439840946 4.1595999465041 3.38214053886749 3.71976243066236 3.90082419968834 3.89787282893189 3.06519868071095 3.73771446404281 2.45713470642901 0.204430368597432 0.205460661455797 0.206827287502868 0.209887602878061 0.199220380544526 0.199203402872880 0.199823653837509 0.201099835524983 0.203781012148222 0.216745427154678 0.19763845552644 0.205497868872506 0.200584975280968 0.208130513344018 0.210473920235758 0.200853438773402 0.211568711499427 0.201085931368535 0.205234092150997 5 5 + 583502 584060 583708.636 583084 584177 + gene protein_coding_gene TRUE TRUE AT5G02590.1 chloroplast lumen common family protein similar to chloroplast lumen common family protein [Arabidopsis thaliana] (TAIR:AT3G53560.1); similar to Os05g0182100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054818.1); similar to TPR repeat [Medicago truncatula] (GB:ABE81686.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0888394363268935 -0.90174761583569 0.387257148959914 1 0.442587672992423 6.7097066012204 -0.0888394363268935 0.0949889444350775 AT5G64730_at 4.9960193292164 5.5150938774587 6.24912269963285 6.21586960734696 7.0018021744652 6.07646302520551 5.47685214695136 5.87188913564535 4.9827681106207 4.6859652468084 5.72989245578374 5.30029612579795 5.61855029149617 5.95628285888713 5.417642093453 5.94298381986268 5.76970445344168 5.24586650640203 4.79787728757682 0.223639628211112 0.217937812205829 0.216160807838755 0.217486001203354 0.225699425321539 0.220502042482713 0.218030347763675 0.218388926790463 0.220830178879806 0.221380309098741 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.216160807838755 0.221600184250729 0.216160807838755 0.216745091298029 5 5|0 +|/ 25891176 25892202 25891619.1 25890338 25892493 + gene protein_coding_gene TRUE TRUE AT5G64730.1 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to Mitogen-activated protein kinase organizer 1 (MAPK organizer 1) (GB:Q3KQ62); similar to Os02g0543400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047075.1); similar to hypothetical protein LOC496482 [Xenopus tropicalis] (GB:NP_001011071.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) -0.130090018410522 -0.90160337897022 0.387330364655103 1 0.442465435507915 11.1478169364782 -0.130090018410522 0.196006919263221 AT5G16210_at 7.22460078104727 6.89475113517083 7.61061201351019 7.70696098357848 8.14889891915341 7.36352252758598 7.11269973697664 6.63802627711768 7.23368956462575 6.9340708595494 8.34216114835824 8.44057240754644 7.92040887311214 8.41706650360472 7.90382732125303 8.12705063089701 7.3698389734365 8.14338420767582 7.08742600436655 0.184452948551707 0.177081937674616 0.186229599088365 0.177997602334791 0.183142169516166 0.194373064376869 0.176217418393056 0.174445627991178 0.183022636743026 0.181740274884094 0.171394501055984 0.179910222983635 0.181749124010933 0.181694212925745 0.182329380093067 0.174710995670300 0.184959286340853 0.179618013011773 0.187135114978895 5 5 - 5291113 5291654 5291365.273 5290870 5297977 - gene protein_coding_gene TRUE TRUE AT5G16210.1 HEAT repeat-containing protein similar to Os01g0514300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043188.1); similar to Unknown (protein for MGC:146562) [Xenopus tropicalis] (GB:AAI24572.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594); contains InterPro domain HEAT; (InterPro:IPR000357) -0.118066311617878 -0.901135176575269 0.387568094336777 1 0.442068758644284 14.9215594973089 -0.118066311617878 0.169577225161591 AT5G60630_at 1.77130742486443 2.43077360262634 1.58497932568032 1.42448082687790 1.89170185944761 1.61491663246599 1.84791208911677 1.72947073526714 2.14333798505582 1.38555041684661 2.16139240291383 2.02394558403562 1.97075659345952 1.93580830357298 2.67949257443343 2.5542686311067 2.15538539395205 2.50228168080111 1.94034941484712 0.207712947484531 0.208454715211521 0.212124234341097 0.214639542183028 0.209050187018108 0.212396305345048 0.211652951052762 0.221926538365672 0.211853678503885 0.207712947484531 0.208206654615664 0.21234974553484 0.214034624123093 0.209419834672945 0.208762748317055 0.209269791897040 0.214095461582705 0.211002440088874 0.209476486377479 5 5 - 24387149 24387539 24387334.273 24386876 24387630 - gene protein_coding_gene TRUE TRUE AT5G60630.1 similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G45230.1) -0.100777814113116 -0.900071034285945 0.388108791674456 1 0.441167830374699 3.82244064593544 -0.100777814113116 0.128491639794996 AT5G27400_at 6.4051324966835 6.55285877072001 6.95819248208101 7.04262766846524 7.9955215605512 8.03635776861254 5.67600548786972 5.72745378138214 6.87931908170403 6.29073753702664 7.24086441337165 7.32681210504289 7.11843636352223 7.32892531726757 7.10258535216735 7.3410485901614 7.00823655377138 6.98578003724733 6.83651776713878 0.184351995203216 0.170709581725555 0.170135980579968 0.179106560530185 0.176122351569131 0.185221631388285 0.185050162167302 0.177129732736760 0.176068328887749 0.168422067282781 0.175468207749028 0.178779632447653 0.174466907151055 0.174903960500017 0.169309392310553 0.171804887868075 0.178828538590203 0.177376948421251 0.171619750685925 5 5 + 9677483 9678233 9678007.545 9676337 9678506 + gene protein_coding_gene TRUE TRUE AT5G27400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73320.1); similar to hypothetical protein MtrDRAFT_AC150244g5v1 [Medicago truncatula] (GB:ABD32378.1); similar to Os05g0143200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054614.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain UNCHARACTERIZED (PTHR23109) -0.0734754681261731 -0.899551984589918 0.388372715197876 1 0.440728717681884 13.7244908621417 -0.0734754681261731 0.0315638023101000 AT5G61160_at 0.809341306136593 1.08875764244199 1.07920372225046 1.30130979569746 1.20986249955025 1.12239827899459 0.9041524749704 1.2623515564323 1.09416035176272 1.19486421491737 1.3491471298464 1.24987815999337 1.08639027284857 1.31773508427330 1.01797415813282 1.40570225586282 1.88259990604541 1.58122064097610 1.29482425049149 0.18733765316985 0.194251697418208 0.192310392723006 0.19334929177283 0.185362722949178 0.189937701285705 0.191752049606564 0.190672948462204 0.193869458787235 0.192755605142482 0.195993911995985 0.200219517225908 0.195818079179783 0.186583732274901 0.185362722949178 0.185454295814350 0.192187883562351 0.188416849231611 0.195288492575107 5 5 + 24626792 24627320 24627010.364 24625950 24627530 + gene protein_coding_gene TRUE TRUE AT5G61160.1 AACT1 (ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 1); transferase similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G29680.1); similar to AT5g39050/MXF12_60 [Medicago truncatula] (GB:ABE91277.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.0866346012302462 0.899488539355771 0.388404984075834 1 0.440675058141505 2.37514577125319 0.0866346012302462 0.0888094495720013 AT5G57730_at 0.920670340595765 1.24020229113558 1.27156722024305 1.44102856174683 1.16516156229502 1.45616901407845 0.829662677907225 1.22958819314856 1.53787605813319 1.58488906330853 1.38952878667178 1.11530414411787 1.18160235032967 1.40880435942588 1.01949881079138 1.37923456598390 0.970097301786323 1.16136582690388 1.37206701560957 0.191645290752327 0.195215677754705 0.203493853674553 0.198700831489529 0.197141827284952 0.195344971582000 0.191645290752327 0.194712512751960 0.19307959679467 0.209106649413271 0.197002099525925 0.197226023558622 0.195974504159020 0.191645290752327 0.191645290752327 0.192122076616498 0.198160795044522 0.192523109248665 0.197813677650406 5 5 - 23410608 23410662 23410633.5 23410608 23410736 - gene protein_coding_gene TRUE TRUE AT5G57730.1 unknown protein -0.0923361392117809 -0.899157981622684 0.388573139322995 1 0.440395536994578 2.54498468127803 -0.0923361392117809 0.106036563033303 AT5G54040_at 1.36060833135624 1.47670780813964 1.83030236033754 1.69551835454288 1.31867012556222 1.23728479909800 1.44508774254806 1.10033811399245 1.92724918734718 1.91155720808114 1.89297729837244 1.74861509231001 1.68935263035472 1.86770240154698 1.41285809760614 1.70691663722033 1.90349642104410 2.20603538605529 1.86192661787038 0.185408640466773 0.184959101097400 0.186124937649414 0.185861551433881 0.181850299695374 0.192497303181738 0.184520872729626 0.181850299695374 0.183693118291584 0.191948697020451 0.194421816424263 0.181850299695374 0.187733965595491 0.183643200215569 0.188716982533053 0.182558725856105 0.185622660420421 0.191508369386482 0.189711247636862 5 5 - 21946086 21946540 21946240.273 21946073 21947863 - gene protein_coding_gene TRUE TRUE AT5G54040.1 DC1 domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54020.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54050.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G29624.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.080736543719306 -0.898523623032387 0.388895980915568 1 0.439859364299237 3.28493399611212 -0.080736543719306 0.0685964096204968 AT5G52420_at 7.04126128637195 7.99679578446009 8.35027522322284 8.51556555828177 8.97007237472983 8.28820303377135 8.79064211344481 8.86553756688537 6.49539302358182 7.28810934861694 7.71845795467223 8.2733483498218 8.66702666720964 8.27810818058729 8.38354387271754 8.84088987944904 8.39725279277876 8.13029505106552 7.64262266147729 0.180017265779411 0.180175766996651 0.174998084324084 0.177066395663811 0.175146004449957 0.171584032933826 0.180375361542056 0.176427705915514 0.218527166817224 0.19526741137007 0.178132372129926 0.173985381071260 0.181544717447184 0.184698323350332 0.179300309595136 0.175667469666906 0.185592474243013 0.193225417216798 0.184139754634263 5 5 + 21299185 21299710 21299437.091 21298999 21300032 + gene protein_coding_gene TRUE TRUE AT5G52420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23920.1); similar to Os10g0548100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065301.1); similar to unknown [Xerophyta humilis] (GB:AAT45003.1) -0.133981650930380 -0.8978353493573 0.389246473019424 1 0.439277984268601 16.0913726283609 -0.133981650930380 0.205558216664702 AT5G38840_at 7.07589068336188 7.50383809540986 8.05582996243061 8.01642016264223 8.3323509733588 8.31502481289396 6.86943737548044 6.73856703698117 7.49371922057023 7.48662775422244 8.26416043986806 8.74164479512288 8.38528389312283 8.36125198058697 8.29241845859745 8.2418969411957 8.22817448306009 8.05427882805266 7.16197414042503 0.155445642807171 0.150305458667375 0.144307629036459 0.143602411366218 0.152899704265206 0.144889227065019 0.160323487684848 0.151993178779859 0.149089121744479 0.152203668286167 0.144005567586075 0.141669506205160 0.141669506205160 0.148914591734123 0.146381953652183 0.142969342805175 0.147824404070824 0.148954973643766 0.156239862173058 5 5|0 +|/ 15571451 15572042 15571656.8 15568526 15572307 + gene protein_coding_gene TRUE TRUE AT5G38840.1 forkhead-associated domain-containing protein / FHA domain-containing protein similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G47790.1); similar to Anion exchanger adaptor protein Kanadaptin, contains FHA domain (ISS) [Ostreococcus tauri] (GB:CAL50100.1); similar to Os06g0275900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057383.1); contains InterPro domain Forkhead-associated; (InterPro:IPR000253); contains InterPro domain SMAD/FHA; (InterPro:IPR008984) 0.083162606686658 0.897637160843678 0.389347438135830 1 0.43911064583027 15.4643761040816 0.083162606686658 0.077801373920642 AT5G44330_at 1.41876278924068 1.66834229404261 1.76259587703883 1.77022034723632 1.39549220786965 1.4226751648567 1.40371507113911 1.29800490096974 1.32471613569588 1.27497242666296 1.20673978374043 1.20817293730562 1.46815446420197 1.44446678142750 1.70845284654954 1.74331939655628 1.42032648169149 1.8702653787491 1.28814366158444 0.200264215949059 0.195832073286463 0.197876755000924 0.201652991175429 0.200065041614224 0.195140801751932 0.193431205461341 0.192451111931086 0.214389986037563 0.200343688077519 0.194944745646285 0.198854833501445 0.203218922015695 0.196359126075163 0.21114844053165 0.193885330508876 0.196078480787633 0.204858821070541 0.198999051407253 5 5 + 17875730 17876249 17875941.273 17874552 17876283 + gene protein_coding_gene TRUE TRUE AT5G44330.1 male sterility MS5 family protein similar to MS5 (MALE-STERILE 5), binding [Arabidopsis thaliana] (TAIR:AT4G20900.1); similar to male sterility protein-related [Musa acuminata] (GB:ABF69984.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0758128389002645 0.897475740496278 0.389429685585187 1 0.438974375359873 2.91981674826196 0.0758128389002645 0.0471590994112015 AT5G23080_at 4.89081684949011 4.53395194407604 6.06162584772787 5.15623648415153 6.57032097356403 6.67847657779521 4.84379505908747 4.55065972569769 5.43420139483707 5.66999345574215 5.65700410075817 5.95723988596681 5.91442519661525 5.38565277054905 6.08438666054687 5.95385806062428 6.19884696733942 5.88199414265885 5.55476362718172 0.208653629938616 0.210546374715957 0.200551495604656 0.214128826685096 0.214965130652267 0.206268479696889 0.208516802000268 0.214214927047427 0.209851545610572 0.208606572464854 0.203759611111031 0.200551495604656 0.203631814422097 0.207670749707126 0.224383394684504 0.200551495604656 0.204810026559209 0.203654762687477 0.202933440395046 5 5 - 7743281 7743753 7743540.182 7742943 7748936 - gene protein_coding_gene TRUE TRUE AT5G23080.1|AT5G23080.2 TGH (TOUGH); RNA binding Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. Role in RNA binding or processing. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to PREDICTED: similar to G patch domain containing 1 isoform 2 [Canis familiaris] (GB:XP_853864.1); similar to Os06g0489200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057672.1); contains InterPro domain Protein of unknown function DUF1604; (InterPro:IPR011666); contains InterPro domain SWAP/Surp; (InterPro:IPR000061)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53800.1); similar to PREDICTED: similar to CG8833-PA [Apis mellifera] (GB:XP_624553.2); similar to Os06g0489200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057672.1); contains InterPro domain Protein of unknown function DUF1604; (InterPro:IPR011666); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) -0.120711470990719 -0.896678796306981 0.389835924947057 1 0.438301902550934 11.1268164988917 -0.120711470990719 0.176880865746504 AT5G18070_at 3.06377921026856 3.49655814654215 3.49222527490954 3.41186499347235 3.83224953923921 3.99983577620229 2.30893706257803 3.10042209627889 3.57330819387519 3.05252391083833 4.04301015883653 4.27176968342955 3.5096072571137 4.04741881588256 4.14709430086112 3.67590166014302 3.41465844604564 3.96940577409068 2.97179084252254 0.201345159066078 0.195614530893262 0.200445024629055 0.19839163800895 0.199625602652298 0.196651213590267 0.204832907599516 0.198140320678591 0.203298217550313 0.193337329286896 0.193301756960760 0.204654387691917 0.195028730387531 0.207518637498866 0.192083821953995 0.192083821953995 0.204952424727593 0.199535175255012 0.198564841267760 5 5 + 5982291 5982759 5982567.818 5981009 5982936 + gene protein_coding_gene TRUE TRUE AT5G18070.1 DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101); intramolecular transferase, phosphotransferases encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). Identical to Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (DNA-damage- repair/toleration protein DRT101) (DRT101) [Arabidopsis Thaliana] (GB:P57750;GB:Q05211); similar to Os07g0195400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059117.1); similar to Phosphoglucosamine mutase [Medicago truncatula] (GB:ABE93069.1); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843) 0.112754052736881 0.894227458824965 0.391087336913393 1 0.43623660656665 6.8802669680009 0.112754052736881 0.159387863132270 AT5G61020_at 7.25456576763582 6.77048107108457 7.57144548644946 7.21527446286201 6.35538372555711 7.08856784649633 6.24693999269814 6.73746328423604 5.02840359646253 5.62100557237201 7.04952091314693 7.68889664114747 6.6186563911223 6.95495652841003 7.3369040314009 6.6092793567751 6.93777560672955 6.00524616110618 5.43124259383655 0.189334784970852 0.18926514305812 0.192306875777271 0.192404624204219 0.189131532119306 0.193355639883091 0.196958163561022 0.193934031274486 0.195388033960447 0.189631473981309 0.197764607336386 0.202973872244602 0.189235544676397 0.187024874946672 0.196034452639446 0.191781050331864 0.196672490053348 0.200198617013596 0.191752036744372 5 5|0 -|/ 24574713 24575537 24575012.6 24574427 24577105 - gene protein_coding_gene TRUE TRUE AT5G61020.1|AT5G61020.2 ECT3 (evolutionary conserved C-terminal 3) similar to ECT2 [Arabidopsis thaliana] (TAIR:AT3G13460.4); similar to YT521-B-like protein [Medicago truncatula] (GB:ABE87461.1); contains InterPro domain YT521-B-like protein; (InterPro:IPR007275) -0.123648858422696 -0.892488770813357 0.391976634144637 1 0.434774640223928 13.0352010586042 -0.123648858422696 0.184720581720575 AT5G49610_at 4.33187814930408 4.89887331690713 5.56460066564013 5.62326800847144 6.25490339579229 5.60138387832334 4.67271239761038 4.9540829371297 4.41284733921746 4.45065490268902 5.51447299487033 5.98760884113232 5.8055688696828 5.771009127985 5.02064235316915 5.86977662248804 5.63205430122899 5.35316681245196 4.77870068379449 0.225423688502254 0.215632051042170 0.232994170485390 0.228157078621019 0.210937590666468 0.219417096933798 0.217787277674931 0.214460001349281 0.224713607719171 0.229379578203572 0.212925548158404 0.215945574608575 0.21486106945481 0.234192365854438 0.223633599731159 0.215015244040938 0.211223076959048 0.21302424376662 0.226748547127715 5 5 - 20148678 20149249 20148950.545 20148500 20149955 - gene protein_coding_gene TRUE TRUE AT5G49610.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G33530.1); similar to F-box protein interaction domain [Medicago truncatula] (GB:ABE93710.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) 0.111569843885701 0.890274811446001 0.393111055943252 1 0.432916543660292 10.3210570764522 0.111569843885701 0.157772572922401 AT5G49570_at 8.90248618271588 9.05587235407911 9.35659157447072 9.59441419356468 9.10628840278335 8.90849410787244 7.03621551500395 7.31766101881919 8.11660681044701 6.50877778807091 7.79878057624084 8.19590171569227 7.66323106244034 8.05014990436007 7.44865355032306 8.32379503884302 7.9423678833334 8.48032574485959 6.95286029660944 0.181500231917472 0.178395473899451 0.181155071349057 0.172628337451620 0.172177082374485 0.177951692585960 0.179462169011638 0.186532853591788 0.185206588764312 0.196821841902612 0.173176726328982 0.179492289992643 0.178460520751727 0.180209798775374 0.182867186616266 0.171146768239959 0.180151387542937 0.177274772347891 0.180768310510819 5 5|0 -|/ 20129554 20130191 20129940.889 20129085 20133411 - gene protein_coding_gene TRUE TRUE AT5G49570.1 transglutaminase-like family protein Identical to Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) (AtPNG1) (PNG1) [Arabidopsis Thaliana] (GB:Q9FGY9;GB:Q84WJ1); similar to Os07g0497400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059707.1); similar to N-glycanase 1 [Gallus gallus] (GB:NP_001026159.1); contains InterPro domain Transglutaminase-like; (InterPro:IPR002931) 0.0822423881640628 0.88987766089044 0.39331479500822 1 0.432583644439002 16.2500774101073 0.0822423881640628 0.0770863002245344 AT5G17480_at 1.69419626450446 1.85435712761528 2.17984596936307 2.02200895493814 1.41380907954522 2.03920422061913 1.63079354870163 1.79702688093039 2.10789800354532 2.10356010319018 1.82657022840590 1.59804981739295 2.05047298453236 1.75577798586014 1.93135933271892 2.23532001508288 1.93053035417866 2.30426882783541 1.80865298062788 0.163959224415966 0.156591688185206 0.165586201527996 0.158161843499443 0.156613239127110 0.160396432044253 0.153993505353903 0.163292526670007 0.166291764219681 0.157239360894797 0.157347786269705 0.166335626724944 0.156308307278262 0.166089914936226 0.155218873636949 0.153993505353903 0.154791436094865 0.158125927843277 0.157961923286935 5 5 + 5762697 5762918 5762806.091 5762691 5762942 + gene protein_coding_gene TRUE TRUE AT5G17480.1 polcalcin, putative / calcium-binding pollen allergen, putative Identical to Probable calcium-binding protein At5g17480 [Arabidopsis Thaliana] (GB:Q9LF54); similar to polcalcin, putative / calcium-binding pollen allergen, putative [Arabidopsis thaliana] (TAIR:AT3G03430.1); similar to Polcalcin Bra n 2 (Calcium-binding pollen allergen Bra n 2) (GB:P69198); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) -0.0958555792040102 -0.889674983524972 0.393418797182518 1 0.43241380505299 3.80927895029652 -0.0958555792040102 0.118554018397247 AT5G28790_at 0.141321943108304 0.750795698491445 0.375377275206427 0.492050728979304 0.275883166148417 0.933531764123063 0.591705183274992 0.859759955279619 0.470639662334076 0.8050076348632 0.857139451348499 0.553204611994115 0.446795548495868 0.498184079703141 0.434195984027397 0.656990675421802 0.415135965416643 1.07247290766789 0.75658166111897 0.209763451054730 0.212860515703891 0.209536377454864 0.217350175793112 0.214556589650705 0.219411063863282 0.212022860725991 0.213921200811271 0.216411920742701 0.217635448997385 0.219106162617813 0.217650433563443 0.216661088602888 0.218265376957971 0.216360635659054 0.209536377454864 0.219894378175157 0.241075505799019 0.215852749429549 5 5|0 +|/ 10820188 10820451 10820328.556 10820177 10820529 + gene protein_coding_gene TRUE TRUE AT5G28790.1 unknown protein -0.113747105076821 -0.889173702279347 0.393676107444017 1 0.431993883181488 1.19964049221720 -0.113747105076821 0.163206787559261 AT5G27990_at 5.21977227062126 5.76402809587672 6.74341629069665 6.48157720668317 6.94507330408568 6.96975192590192 5.71820589911606 5.9078403716842 4.77261150790084 4.71457158748031 5.87700554558981 6.14933414029954 5.94692314150371 5.74934912316222 6.15872479322666 5.69965134256873 5.93355822907391 5.79655188876343 5.02373293468868 0.231056437263842 0.221981657437270 0.228955455178594 0.222486743191322 0.225946999405097 0.224783471270414 0.220271726065728 0.222878298615963 0.237814362026403 0.225651144453827 0.220498371391698 0.21922819488316 0.223546918639322 0.224998456887255 0.225981132276057 0.218338418101451 0.242346101337342 0.222409628345195 0.218338418101451 5 5|0 +|/ 10017371 10018219 10017645.4 10017040 10018445 + gene protein_coding_gene TRUE TRUE AT5G27990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22510.1); similar to hypothetical protein [Ipomoea trifida] (GB:AAS79569.1); contains domain gb def: Hypothetical protein (PTHR21250:SF9); contains domain FAMILY NOT NAMED (PTHR21250) 0.09255822039361 0.889044685230962 0.39374235146752 1 0.431885838536449 11.5941378133566 0.09255822039361 0.109633151697447 AT5G16120_at 8.43940298207682 8.3621481837391 8.76467017832637 9.01607145893001 9.70563908554974 8.96206015127696 8.27660037748683 8.05075687792196 7.63168698745079 7.75385847224563 8.15899588356679 8.40469423062582 8.50928964445135 8.46620990476076 8.24452615441025 8.64289776836674 8.30449437637445 8.18219827141312 7.66354120348853 0.168663854290749 0.15928132771802 0.193838691391095 0.168713612141832 0.176556405794047 0.17597884457359 0.16070999153781 0.168484216192441 0.169100610960957 0.163439851444626 0.172857493138316 0.164322740799424 0.156542656748552 0.179622296145999 0.178569949299972 0.159708040251267 0.168321623407840 0.161894916598176 0.161869982422704 5 5 + 5266945 5267724 5267377.818 5265942 5267982 + gene protein_coding_gene TRUE TRUE AT5G16120.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G77420.1); similar to Alpha/beta hydrolase [Medicago truncatula] (GB:ABE78761.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.104805455527345 -0.888457085227727 0.394044153576053 1 0.431393924704197 16.7207647454007 -0.104805455527345 0.141977174971702 AT5G42320_at 6.75080652996017 7.26100185969796 8.0479118217542 7.80952918520992 8.30941064685709 8.24144264951953 7.22938830710442 7.04208986289442 7.06264551785434 6.4745315114135 7.77657887107962 7.7698246886629 7.56278441427362 7.88262571372944 7.42036477307375 7.19029956405548 6.64122474996173 7.89231649497462 6.64715313999422 0.196808866942496 0.178986878723967 0.193243012006439 0.181328723495638 0.184668584373521 0.180644906954063 0.191533666339251 0.179332613457969 0.186183662394435 0.183150562115665 0.176422420005242 0.172264168072723 0.177282308765694 0.175587258519872 0.17979834714737 0.176920476281752 0.192537603482039 0.182354612706449 0.175467636721205 5 5 - 16935885 16936760 16936241.636 16935717 16938685 - gene protein_coding_gene TRUE TRUE AT5G42320.1 zinc carboxypeptidase family protein similar to Zinc carboxypeptidase family protein [Tetrahymena thermophila SB210] (GB:XP_001020811.1); similar to Os02g0119300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045700.1); contains InterPro domain Peptidase M14, carboxypeptidase A; (InterPro:IPR000834) -0.0901713064301317 -0.886986184253653 0.394800339036767 1 0.430163762129315 14.7090038404483 -0.0901713064301317 0.103374042534016 AT5G65370_at 2.07690242811079 1.84463965391044 2.10620595582807 2.27911532416604 1.67793062203928 2.0076790198193 1.75330996150620 1.87366801315413 1.91331160511819 2.42776818945661 2.50296862528474 2.43467606157148 2.41001475222080 2.36376550040308 2.41290513158848 2.15388752821480 2.31547233047813 2.47828270389902 2.52499318831469 0.219293047113339 0.221245699097835 0.223330421445612 0.218868967896885 0.218175542311509 0.224249602411553 0.218189837209608 0.218937470253786 0.221697239367467 0.225923711278516 0.215424901508402 0.216781193835857 0.212471655127766 0.214113999236128 0.23154930100235 0.22009542265985 0.213862302799334 0.238075396314454 0.215249426857581 5 5 + 26139265 26139894 26139644.182 26138934 26139975 + gene protein_coding_gene TRUE TRUE AT5G65370.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related Identical to Putative clathrin assembly protein At5g65370 [Arabidopsis Thaliana] (GB:Q9FKQ2); similar to epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related [Arabidopsis thaliana] (TAIR:AT5G10410.1); similar to fiber protein Fb19 [Gossypium barbadense] (GB:AAP34366.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain ANTH; (InterPro:IPR011417); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) -0.0824419475290373 -0.886970962362595 0.39480816982012 1 0.430151040633144 4.28877515906881 -0.0824419475290373 0.0787472336202665 AT5G23480_at 1.85617066585121 1.76285717130401 2.28671405277601 2.09828837072251 2.43316808149127 2.43144724722380 2.29925201839036 1.87546132607568 2.56705674528676 2.55279545407281 2.75818413585796 2.70125453510445 2.85457037892776 2.72094845999145 2.81676928973224 2.46912068125058 3.23397668031831 2.80549029545964 2.35463321310798 0.182401227143411 0.177382001493433 0.176394269049930 0.184189825509279 0.181619313519581 0.182954113114473 0.181264769855813 0.181932151600185 0.178503161682696 0.178325631310143 0.176394269049930 0.176394269049930 0.190013407208398 0.183740471449228 0.176394269049930 0.181309596469346 0.178414120640838 0.185596909781812 0.176979819823876 5 5 + 7918821 7919120 7918952.727 7918338 7919281 + gene protein_coding_gene TRUE TRUE AT5G23480.1 similar to SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08430.1); contains InterPro domain GYF; (InterPro:IPR003169) 0.0833277081905855 0.886820732138108 0.394885460366819 1 0.430025497657443 4.7736870890141 0.0833277081905855 0.0818702498300523 AT5G52290_at 0.887916849643142 0.487722149501137 0.416265399065142 0.858849066910923 0.225556241651829 0.707611508544132 0.167565868598020 0.405650127593594 0.684369849698222 0.507919881855469 0.920900347422214 0.103459823277262 0.850763604861383 0.618294416245282 0.34960361579786 0.804789129667264 0.943742287609355 0.955351847386304 0.168475026200651 0.182906417322207 0.190818582568405 0.1876051440079 0.188485195772183 0.197406574495295 0.186891396877357 0.191939505517775 0.184521602085951 0.192814079926048 0.185242807130796 0.200050468833594 0.189433539785799 0.190722611098727 0.188667598457108 0.188459276183259 0.185930395365354 0.190721330594750 0.192336317545524 0.190292269615669 5 5|0 -|/ 21247739 21248235 21248001.9 21247579 21253780 - gene protein_coding_gene TRUE TRUE AT5G52290.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25234.1); similar to Os02g0642600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047556.1) 0.103324103333689 0.886045662878489 0.395284385207483 1 0.429378082742073 1.09311784474756 0.103324103333689 0.138993978451097 AT5G07800_at 1.64868097937518 1.41653277575825 1.43759104768511 1.80058722353241 1.58545461376085 1.38075227700396 2.03394949847055 1.66446825906639 1.44899490267914 1.84925354301647 2.44299803847626 2.8487814994196 2.15534256176607 2.52436548473782 2.89558702901778 2.43468353821349 2.45449340272092 2.32021695024486 2.3410616436114 0.223258904235832 0.22622080973112 0.232820940074714 0.223076435335092 0.217865336385277 0.220149674699925 0.226964241617407 0.224022541063666 0.226623429572828 0.217865336385277 0.217865336385277 0.225088300859144 0.225849266956643 0.224538956066213 0.228284430597652 0.22775014203396 0.233861250237464 0.225548723898114 0.222585074000532 5 5|0 -|/ 2486725 2488111 2487087.556 2486577 2489297 - gene protein_coding_gene TRUE TRUE AT5G07800.1 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT5G61290.1); similar to putative flavin-containing monooxygenase FMO-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD89476.1); similar to Os07g0112100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058742.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) 0.0901977038659895 0.883742138745712 0.396471647387134 1 0.427456796310417 3.81566638075339 0.0901977038659895 0.104419303450163 AT5G57490_at 7.11945817582557 7.47776820487768 7.92424671019508 7.84209548659068 8.50495415556285 8.19696280340123 7.19168514159664 7.20054972725102 6.71726393214935 6.80619503322248 8.40729424314607 8.56189944617057 7.93873387153047 8.09408471998371 8.37899540657372 8.18807443766491 7.65072468252048 7.76825502038483 7.13494695789742 0.166469983488856 0.159093049411081 0.159618995740689 0.167450221925315 0.159091091979777 0.166980745937956 0.16701383360929 0.163849633293331 0.176251673209072 0.169354390708883 0.161011914836241 0.161651765168048 0.158168948303689 0.173236613931353 0.155219432139124 0.153978240529015 0.181080055711829 0.171968127394302 0.160815212347543 5 5|0 -|/ 23301156 23301843 23301452.3 23300906 23303160 - gene protein_coding_gene TRUE TRUE AT5G57490.1 porin, putative similar to porin, putative [Arabidopsis thaliana] (TAIR:AT5G67500.1); similar to porin, putative / voltage-dependent anion-selective channel protein, putative [Arabidopsis thaliana] (TAIR:AT5G15090.1); similar to VDAC3.1 [Lotus corniculatus var. japonicus] (GB:AAQ87023.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) 0.0833673735478428 0.883703624732954 0.396491518903172 1 0.427424709380241 15.1870365687892 0.0833673735478428 0.0830071184033046 AT5G46770_at 1.47341589957302 1.36699306043252 1.72451812898387 1.98033550802888 1.53182249896215 1.99353400961544 1.64160272594027 1.43182131332114 2.30243187461363 1.86112549020647 2.02936654327825 1.69310639236077 1.29569224441543 1.83407595708949 1.83733691560251 1.75649905603433 1.58042036766452 2.15354610569846 1.86078277470225 0.156596242709615 0.153562003348824 0.16140568470942 0.151492475796039 0.152953116232749 0.155380448678695 0.155215645066065 0.153617331879686 0.157225766213343 0.153135066858077 0.151492475796039 0.151492475796039 0.155243974966478 0.154100810405716 0.151492475796039 0.152721619652159 0.155680227065051 0.159136628811207 0.154412759260065 5 5 + 18994730 18995029 18994884 18994635 18995387 + gene protein_coding_gene TRUE TRUE AT5G46770.1 unknown protein -0.0886925141507028 -0.88357925840893 0.396555691097081 1 0.427321105007128 3.53331480691154 -0.0886925141507028 0.100006149433548 AT5G62340_at 0.866431278633677 1.00340719894956 1.16248809435099 0.892756711944333 1.28910566551536 0.841275507122534 1.48080116729713 0.971718558034454 1.08203910656307 1.10840457547016 1.41930043748789 1.41196649947924 0.718890059166334 0.810012632159696 0.805727832770094 1.00492203287686 1.11802162575428 1.03789272824358 1.00599997236622 0.241028210707439 0.248342772970142 0.246654293085315 0.251311991698691 0.246875140590344 0.257598019540333 0.237809149541968 0.246792699310179 0.245122358350968 0.26361414393644 0.241972290510890 0.237809149541968 0.257131031384843 0.244074976759098 0.240274393105474 0.237809149541968 0.249201750575592 0.245880411222937 0.250238932132099 5 5 + 25050947 25051415 25051154.636 25050744 25051630 + gene protein_coding_gene TRUE TRUE AT5G62340.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) [Arabidopsis thaliana] (TAIR:AT5G62350.1); similar to putative 21kD protein precursor [Medicago sativa subsp. x varia] (GB:CAA72315.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.0987332428161712 -0.881834145458637 0.397456915818455 1 0.425868635558965 2.11665949729370 -0.0987332428161712 0.128484711670016 AT5G24260_at 5.45028039547929 6.031957355942 6.56605525766285 6.33460591815544 7.07921533960288 6.43427522256011 4.76335120570295 4.79275826428517 5.33971810968704 5.52347202867362 6.24963844089528 6.76109402865493 5.74174779194523 6.56450681282435 6.2912622642404 6.39162554074391 5.7773098639805 6.34348045911023 5.19491797764995 0.235860674884133 0.217887325343244 0.230097721559565 0.230743021909730 0.221435665985345 0.231115417616848 0.23016699563182 0.225891400391597 0.254724011040129 0.221652774090373 0.229162929494669 0.222417521438820 0.217887325343244 0.232846154512002 0.233704461582309 0.224640025395396 0.231833860613306 0.236571225783032 0.219767341808403 5 5 - 8234949 8235392 8235128.182 8234726 8238247 - gene protein_coding_gene TRUE TRUE AT5G24260.1 prolyl oligopeptidase family protein similar to acylaminoacyl-peptidase-related [Arabidopsis thaliana] (TAIR:AT4G14570.1); similar to Esterase/lipase/thioesterase; Peptidase S9B, dipeptidylpeptidase IV N-terminal [Medicago truncatula] (GB:ABE80822.1); similar to Os02g0290600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046592.1); similar to Esterase/lipase/thioesterase; Peptidase S9B, dipeptidylpeptidase IV N-terminal [Medicago truncatula] (GB:ABE81707.1); contains InterPro domain Peptidase S9B, dipeptidylpeptidase IV N-terminal; (InterPro:IPR002469); contains InterPro domain Peptidase S9, prolyl oligopeptidase active site region; (InterPro:IPR001375); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.109379936813145 0.879950831557957 0.398431099036696 1 0.424303888391689 11.7404552977419 0.109379936813145 0.155626993349913 AT5G49180_at 1.71711206894451 1.25282274035575 1.41697784089830 1.32005534300454 0.966492129398713 1.51253245808795 1.05282138856368 1.12586452035878 1.47614039633313 1.41604282819974 1.44696069104515 1.11953868505134 1.41382832330194 1.50450902784892 1.54158707769455 1.18250581719953 1.46992420536666 1.76861495371272 1.48240675238143 0.168321961956991 0.168321961956991 0.173945844136059 0.173741748997329 0.17287195995086 0.170284588587317 0.170178834848287 0.172023411726812 0.179416550241087 0.184979338405592 0.176398661258536 0.174928570067344 0.173337225176286 0.168321961956991 0.177173602370035 0.178773599211865 0.178694665051048 0.177445320706754 0.174520160734359 5 5 - 19958026 19958580 19958262.818 19957904 19960233 - gene protein_coding_gene TRUE TRUE AT5G49180.1 pectinesterase family protein Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G06830.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE80624.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.097407984456063 -0.879087735171596 0.398878104240624 1 0.423587740632069 2.74014993951354 -0.097407984456063 0.125801800808871 AT5G66240_at 8.44697682036359 8.31827040626814 9.30058337701348 9.28013012929343 9.54573563378951 9.27406695735885 8.01071715358492 8.47604840823607 8.71790776395314 8.64701286885762 9.01782138974194 9.11844151536738 9.05205325961145 8.92878863260097 8.8276153463318 9.36240791509444 9.10688866299236 9.35045124509989 8.80342130657208 0.134020037888122 0.133183299490132 0.136205181038432 0.138264134413147 0.139221588508519 0.143404897092384 0.143641160590243 0.135704520309393 0.146495587559747 0.147767067126043 0.138545782974668 0.141697007508964 0.135756664362182 0.139750262199429 0.142168047925661 0.133414348965456 0.147900536886355 0.134906871449241 0.141064106626337 5 5|0 +|/ 26484328 26485399 26484945.556 26483430 26485674 + gene protein_coding_gene TRUE TRUE AT5G66240.1|AT5G66240.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G14530.1); similar to hypothetical protein DDBDRAFT_0218126 [Dictyostelium discoideum AX4] (GB:XP_641992.1); similar to Os07g0589400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060150.1); similar to Os05g0543300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056203.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.0867993395878643 -0.877955582122686 0.399464980974712 1 0.422649254834464 17.7407356818965 -0.0867993395878643 0.0959354751526913 AT5G38960_at 1.97438165189149 2.53893798701421 2.64103631696389 2.98507220559201 2.18835022874738 2.550269143167 1.9881475671554 2.21154278235435 2.72791338093191 2.6124510875599 2.16494083820281 2.22684576656265 2.27899875025656 1.94982918477466 2.64407107763559 2.83779347089444 2.68125084562073 2.77530144682155 2.26189634165749 0.197402852224806 0.194429222979954 0.200685183367877 0.207329992273593 0.200122733957830 0.198657563441037 0.206597743371865 0.198120411699013 0.199724949503876 0.209215951874582 0.200120429232281 0.193899207015350 0.201900263930311 0.197660407164798 0.199936474156945 0.192087019769247 0.196580504808800 0.205551194395414 0.197143301023835 5 5 + 15610498 15610926 15610731 15610222 15611013 + gene protein_coding_gene TRUE TRUE AT5G38960.1 germin-like protein, putative Identical to Putative germin-like protein subfamily 1 member 12 precursor [Arabidopsis Thaliana] (GB:Q9FMA6); similar to manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G38940.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Germin; (InterPro:IPR001929) -0.101031132042934 -0.876333174889168 0.40030702986413 1 0.421306179140730 4.87420016501700 -0.101031132042934 0.136040699488660 AT5G11230_at 2.32604879953261 2.62058091000844 2.73497968211929 2.71790588041238 2.95059533111628 2.88178339766078 3.20943389882954 3.43053733860523 2.34554685235380 2.86963854645432 3.78641298213183 4.22965629959458 3.28964123644546 3.16947732538022 3.49795992121722 3.92570371207029 3.36494078174294 3.16358472771572 3.06750194361050 0.222074884370892 0.221582154860176 0.228714661200328 0.222698102545185 0.221582154860176 0.227843713646286 0.221710041578355 0.231258886448447 0.24239209683508 0.227156149158167 0.221582154860176 0.221602084945449 0.227746344522064 0.230985678953034 0.229408470047779 0.221582154860176 0.238118641690100 0.229123590755643 0.223857197556758 5 5 + 3581042 3581543 3581262.909 3580563 3581618 + gene protein_coding_gene TRUE TRUE AT5G11230.1 phosphate translocator-related similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT5G25400.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE88491.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) -0.0776784390938134 -0.87464195380956 0.401186095410799 1 0.419908397439775 6.01614210683231 -0.0776784390938134 0.064904149256545 AT5G55620_at 10.1407477500903 10.5316765173096 10.4294293654065 10.6175316556258 11.1577936835720 11.1365051756719 11.0459623296736 11.2710778881543 11.1564111243848 11.1041495645690 12.3850456560818 12.4887506582968 12.6287652157502 12.1814499690314 12.1259070770162 12.6352015438603 12.0443094772077 12.185646772303 11.1581481926818 0.0743090142925204 0.0697745984805434 0.0755595565376026 0.074394585313182 0.0689799596617234 0.0737479334913701 0.0686034518740766 0.0710703257460902 0.0781526523082024 0.0711070694291976 0.0708088586117773 0.0686442574427629 0.0724576073201056 0.077302047081385 0.0720049423792758 0.0694669559160006 0.074174170783675 0.0720338094241436 0.0691835282396978 5 5 + 22547609 22547869 22547725.182 22547430 22548165 + gene protein_coding_gene TRUE TRUE AT5G55620.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G09950.1); similar to Os06g0523300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057752.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45825.1) 0.082968950920356 0.87434236422823 0.401341955046725 1 0.419661029557074 22.5283176323906 0.082968950920356 0.0846621173590535 AT5G10450_at 12.1439718717648 12.0514949481175 12.6218430654068 12.554337369242 12.9941478822825 12.7768581966565 12.2451500596311 12.0037696253684 12.2525593189355 12.1224781106735 12.7134241931558 12.6330397738658 12.7282648356803 12.6729883090688 12.5579588449952 12.7198860601035 12.6760353113690 12.7347200871266 12.2611916772752 0.0768523696869727 0.074432605624835 0.0764329037503133 0.0786319718864356 0.0753516466422736 0.0790844267757503 0.074798266189907 0.0751098632976692 0.0840466304610716 0.0754136120058415 0.0764200829987154 0.0747713861086249 0.0751538187996682 0.0760321135253668 0.0792455107693254 0.0747396093472055 0.0747953573105878 0.0770973599663056 0.0750216324828501 5 5 - 3284705 3286072 3285543.091 3283854 3286348 - gene protein_coding_gene TRUE TRUE AT5G10450.1|AT5G10450.2 GRF6 (GF14 LAMBDA); protein phosphorylated amino acid binding Encodes a member of the 14-3-3 gene family that is a lambda isoform (14-3-3λ). Interacts with APX3 (ascorbate peroxidase) and AKR2 , suggesting a role in mediating oxidative metabolism in stress response. This protein was shown to colocalize and interact with SERK1 by which it is phosphorylated. Identical to 14-3-3-like protein GF14 lambda (General regulatory factor 6) (14-3-3- like protein RCI2) (14-3-3-like protein AFT1) (GRF6) [Arabidopsis Thaliana] (GB:P48349;GB:P42647;GB:Q9LX97); similar to GRF8 (GENERAL REGULATORY FACTOR 8), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G65430.1); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308)|Identical to 14-3-3-like protein GF14 lambda (General regulatory factor 6) (14-3-3- like protein RCI2) (14-3-3-like protein AFT1) (GRF6) [Arabidopsis Thaliana] (GB:P48349;GB:P42647;GB:Q9LX97); similar to GRF8 (GENERAL REGULATORY FACTOR 8), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G65430.2); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) 0.0763965752671543 0.874168818420108 0.401432260250551 1 0.419517767805509 24.8697546502497 0.0763965752671543 0.0595942378362886 AT5G44550_at 0.167635226503438 0.457345781240101 -0.00877371782030727 0.366939655523077 -0.0165662123550389 0.236179694660742 0.108936386528294 0.265640082558361 -0.0569560273572866 -0.0588648410322976 0.131489391435711 0.799872337689614 8.30250885498884e-05 0.312085293553660 0.59952986752586 0.365461423892912 -0.0320950793552964 0.258830184638444 -0.0997429584692876 0.180532201862033 0.182026164376155 0.186116860063429 0.177538405222157 0.181564547275345 0.178919265710315 0.183198102678579 0.185849244749918 0.191014814577422 0.177538405222157 0.186985760380168 0.177538405222157 0.180946847863405 0.183243576871253 0.178811427423012 0.18205959194237 0.186261715550041 0.178995165072124 0.182309959896331 5 5|0 -|/ 17959364 17960363 17959841.3 17959102 17960440 - gene protein_coding_gene TRUE TRUE AT5G44550.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G20390.1); similar to plant integral membrane protein TIGR01569 containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99368.1); similar to Os12g0610800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067249.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 0.086668191984059 0.873493889554334 0.401783594945298 1 0.418960846476619 0.313443335407695 0.086668191984059 0.096899684925185 AT5G39980_at 2.69235942800977 2.98407788049454 2.91051363067179 2.91437023627525 3.0041764774785 2.94468485980975 2.47687641902136 2.73403646168295 3.21953704290155 2.73674439542309 3.09500789640863 3.46763038693497 2.93864008303958 3.38716077034938 3.67489001378689 3.04761719672071 3.33833934127647 3.53213386174417 2.59407223910450 0.18925461622362 0.19606452840929 0.199680156420917 0.192643047523543 0.190177115419361 0.201812725510858 0.19997310040115 0.193926054322926 0.204548536439397 0.195792736119185 0.195731232828847 0.192724256911237 0.199011311627206 0.189839282025298 0.197225775124260 0.194455380078211 0.200658415277527 0.18925461622362 0.20093402268382 5 5 - 16018265 16018820 16018647.636 16017940 16020300 - gene protein_coding_gene TRUE TRUE AT5G39980.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G62930.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE89165.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0783406003067061 -0.873290825734355 0.401889341352985 1 0.418793359233537 5.91278459230998 -0.0783406003067061 0.0680844354378994 AT5G24360_at 4.84645445122536 5.61046590637341 5.65573918529576 6.30937134006362 6.58811630407155 6.46379092565047 5.25011219332321 4.74343081671261 4.77846428076012 4.90490913295634 5.87134263708446 6.27303134893022 5.57587571079733 6.5616797765302 5.81910011688053 5.76090034654017 5.71276266154842 5.86917785467241 4.85481431848545 0.227264595621725 0.227264595621725 0.227264595621725 0.227264595621725 0.246954174379018 0.242116407359764 0.249270795917488 0.242467291608390 0.245358853148473 0.231508207073333 0.227264595621725 0.239060128477678 0.229821041936188 0.233308148208953 0.229107949198399 0.227264595621725 0.256284527283001 0.238875900347904 0.227728051198553 5 5 + 8319242 8319805 8319513.818 8316446 8319984 + gene protein_coding_gene TRUE TRUE AT5G24360.1 protein kinase family protein / Ire1 homolog-1 (IRE1-1) similar to IRE1A (Yeast endoribonuclease/protein kinase IRE1-like gene), kinase [Arabidopsis thaliana] (TAIR:AT2G17520.1); similar to Protein kinase; PUG; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] (GB:ABE78057.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Ribonuclease 2-5A; (InterPro:IPR010513); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Quinoprotein amine dehydrogenase, beta chain-like; (InterPro:IPR011044); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain PUG; (InterPro:IPR006567) 0.125918058713404 0.872622619643433 0.402237447874549 1 0.418242457364411 11.0717083323513 0.125918058713404 0.196028338966749 AT5G57510_at 2.61048567311802 2.40554799828162 3.04776750290203 2.97376178728508 2.34355302439762 2.89902670095268 2.56833355031977 2.61447318707505 2.44489526394068 2.43658987362254 2.43340776463930 2.88561563288605 2.59597115250752 2.79772515214297 2.36817704865699 2.5037368048978 2.46426887352892 2.55572856188939 2.36407689588688 0.203095815544601 0.203344787494439 0.202144285897293 0.201107471401743 0.204716943240949 0.201824665116023 0.205096362722945 0.202372475014638 0.211628984445638 0.202012671485814 0.205562075777598 0.201268787045613 0.205538221427038 0.199720360770793 0.212280147343051 0.204976334581353 0.211950162569618 0.206451980974993 0.203961694246620 5 5 - 23306390 23306753 23306587.818 23306390 23306782 - gene protein_coding_gene TRUE TRUE AT5G57510.1 similar to Os08g0448100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061936.1) -0.0887076832337101 -0.871953890991322 0.402586034179548 1 0.417691485937181 5.17825178722997 -0.0887076832337101 0.103566553824219 AT5G55910_at 8.3699205181026 8.62942218406469 9.38367824006802 9.37779175236796 9.8837896311196 9.27241027581725 9.2111555102203 9.20636384863168 9.3198048900762 9.28065157179129 10.2831735507638 9.93292208285444 10.1093548104866 10.2256252321789 9.4743339347099 10.1260070715158 9.73538696979028 9.70512414661995 9.31429782260471 0.156376329213486 0.143733489018457 0.148188646801949 0.143152088346151 0.141812363774330 0.157766248978017 0.140136852190578 0.145700780654022 0.15966089400546 0.150790248341226 0.137707981981384 0.143905451149607 0.141711485640714 0.145768390789028 0.152425702053099 0.139215605207010 0.160400989286990 0.144219226598469 0.141517004776899 5 5 - 22657320 22657839 22657555.818 22657070 22659580 - gene protein_coding_gene TRUE TRUE AT5G55910.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to protein kinase (GB:AAA33509.1); similar to Protein kinase PVPK-1 (GB:P15792); similar to G11A protein (GB:AAA33905.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0926126076430125 -0.871616514359386 0.402761976343467 1 0.417413655558313 18.7937710298935 -0.0926126076430125 0.114945747813101 AT5G26780_at 7.90289282302691 7.92939818210916 8.68478308443446 8.65419680032135 8.88411473962317 8.77481677583415 8.65287036920027 8.50059905716747 7.16280053140048 7.6532337060632 8.8648098321185 8.92501137459216 8.52770309456608 8.77857386701912 8.958235876542 8.82468464691143 8.59772385761242 8.68495244456576 7.34972767786883 0.13373072223373 0.136136195678598 0.134541329486683 0.129338214785672 0.137261930355074 0.138207667272080 0.130869005105630 0.131651088427753 0.149529716196592 0.138697182654149 0.133991966017568 0.129765503875109 0.132007567711306 0.130155085775832 0.132254714626150 0.135393513363040 0.132999306636375 0.136993432374213 0.141033719018557 5 5|0 +|/ 9420154 9421668 9420685.7 9418198 9422159 + gene protein_coding_gene TRUE TRUE AT5G26780.1|AT5G26780.2|AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); glycine hydroxymethyltransferase Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1. similar to SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1), glycine hydroxymethyltransferase [Arabidopsis thaliana] (TAIR:AT4G37930.1); similar to Glycine hydroxymethyltransferase [Medicago truncatula] (GB:ABE84180.1); similar to Serine hydroxymethyltransferase, mitochondrial precursor (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (GB:P50433); similar to Serine hydroxymethyltransferase 1, mitochondrial precursor (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) (GB:P49357); contains InterPro domain Glycine hydroxymethyltransferase; (InterPro:IPR001085) 0.0712977375666051 0.870306773020149 0.403445508169121 1 0.416335953095042 16.5773585686405 0.0712977375666051 0.0331844003658539 AT5G16660_at 10.2002669045663 10.2736402227429 10.8034760944025 10.7586402494057 11.1798543028765 10.8257110507931 10.1270761170649 10.2369567198322 10.4917702930050 10.0301169433414 11.0531667170447 10.8856503150306 10.9019437091178 10.9317867887376 10.7349993464336 10.9594350263718 10.6935086169274 10.8963900352457 9.9962010831668 0.095285496819485 0.0975481996068156 0.0966726140034653 0.10235299796383 0.0943345445271828 0.098745959511429 0.0966548324026393 0.100222610247400 0.0971942257635718 0.0930856940117532 0.095106435204449 0.0930856940117532 0.0930856940117532 0.0944602572943124 0.103229107949258 0.0930856940117532 0.101848235178745 0.0932372454573545 0.0930856940117532 5 5 - 5465704 5466427 5466002 5465487 5467066 - gene protein_coding_gene TRUE TRUE AT5G16660.1|AT5G16660.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02900.1); similar to hypothetical protein [Plantago major] (GB:CAH59416.1) 0.0774814620965618 0.869792110692148 0.403714319652777 1 0.415912850171887 21.0781057956445 0.0774814620965618 0.0658711355759233 AT5G01910_at 1.60204768651193 1.2524763658288 1.70883199612901 1.99435449571167 1.22179272527680 1.73902671966239 1.37122132494590 1.42957071717121 1.79600619700126 1.82201472499977 2.14409650066896 2.48804130498146 2.12753755103427 1.78644713915248 2.24930711266724 1.91597275447590 1.8358739096391 2.14130914913523 2.02504295592093 0.157775703789217 0.160920480831269 0.162865496068489 0.157510023048174 0.163552277686764 0.159017954265563 0.156570504860987 0.167611963117443 0.173586272010895 0.165724911330768 0.156570504860987 0.157380890192882 0.159972778820408 0.159971033050261 0.170699824712268 0.160092452852395 0.156570504860987 0.163330376972235 0.158019472733561 5 5|0 -|/ 357947 358619 358350.6 357947 358652 - gene protein_coding_gene TRUE TRUE AT5G01910.1 unknown protein 0.0938526939063228 0.868824935839174 0.404219813983979 1 0.415118317597686 3.5234624890847 0.0938526939063228 0.119226859642614 AT5G46795_at 1.02209265061513 1.02091283561461 1.44129464357916 1.66664930200140 1.13933593557315 1.34726951240965 1.01043103350469 1.05936874376129 1.45796129683412 1.24869157313612 1.25516253374191 1.34168773839372 1.44721453061927 1.68624589966136 1.21825362984259 1.27335840607964 1.67676591971642 1.8144146874311 1.80717246994151 0.240471628115315 0.238780347695896 0.239559474538983 0.248330549313152 0.245134444788171 0.241517461004322 0.245484495625181 0.238780347695896 0.255138994078458 0.254246226871431 0.238780347695896 0.238780347695896 0.244718989785119 0.243694234964292 0.254110398726087 0.238914069921099 0.239201528869158 0.245440300163842 0.245912644499294 5 5|0 -|/ 19004288 19005357 19005026.8 19004215 19005424 - gene protein_coding_gene TRUE TRUE AT5G46795.1 MSP2 (MICROSPORE-SPECIFIC PROMOTER 2) 0.074658340002942 0.868672719340584 0.404299409540096 1 0.41499334097001 2.69779251454389 0.074658340002942 0.0537354616437573 AT5G48690_at 1.09808748242727 1.19384045935761 1.29104445353951 0.878288331707546 1.09657167566151 1.23070391725929 1.02845171852105 1.13077720955988 1.85298346342313 1.55045192004051 1.90745538265475 2.57736364171525 1.94494905922072 1.51395709921172 2.04613063131480 1.90121986991416 1.22805796491552 2.29836810864894 1.33746189922243 0.184330444660382 0.196628667550892 0.193053752699834 0.189414077373225 0.194775033242134 0.192161401264772 0.186803734947581 0.187823893456529 0.193437272416031 0.193796827252081 0.188686581448144 0.188783436227134 0.183930517718253 0.186520126904265 0.189125578429686 0.189655077943384 0.198006742753384 0.194396943568128 0.186078986182100 5 5 - 19764511 19765083 19764753.545 19764330 19766284 - gene protein_coding_gene TRUE TRUE AT5G48690.1 similar to ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G04850.1); similar to PUG; Zinc finger, C2H2-type; UBA-like [Medicago truncatula] (GB:ABE83604.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain PUG; (InterPro:IPR006567); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.0806370966086763 0.867022320121865 0.405163110409928 1 0.413639493563239 2.87221406296830 0.0806370966086763 0.0789247309234054 AT5G42060_at 3.08236552894897 3.31921657799161 3.43734045038828 3.95190644143304 3.95221125039394 3.73621335124147 3.61469721957549 3.43240265295292 3.74807109848925 3.60324155556829 4.86493916194587 4.71196453125209 4.36437152942768 4.50360117283885 4.2685911355785 4.11755072126672 4.09964686274784 4.2471867005037 3.47931912293012 0.166447443675406 0.165228784239959 0.183764236686730 0.163166115842899 0.166888741140362 0.164119965480153 0.176938602713203 0.165837739992247 0.167941806941504 0.164413269415187 0.160809165582319 0.163892960718129 0.15986785519683 0.161998297063513 0.159850848892867 0.161903316885704 0.158994891624692 0.168883859211143 0.163633129015502 5 5 - 16835881 16836096 16835969.273 16835616 16836183 - gene protein_coding_gene TRUE TRUE AT5G42060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64490.1) -0.0901980914782834 -0.866638251064117 0.405364285970401 1 0.413324752514668 7.5695152187529 -0.0901980914782834 0.109553714355332 AT5G08120_at 6.46278502354388 6.60230091892797 7.50687421023638 7.25020249622542 7.59357009241939 7.1697162271904 6.55215978851366 6.21476299188282 5.63565657523575 5.53007952020952 7.32156227174426 7.40436658796155 6.8575937522834 6.98390278026116 7.11090740049945 7.22105195431382 6.8346485773371 6.61487384880898 5.92898232956392 0.184469263887339 0.179664957863644 0.180560704325444 0.188421347932887 0.184077782467463 0.188689184324 0.186060181605992 0.179687908791307 0.193113536543801 0.205136362394653 0.181836640151156 0.180907285247361 0.186937724746006 0.19045944250909 0.179664957863644 0.179664957863644 0.192067910441980 0.192944428393841 0.197560152588615 5 5 - 2600748 2601373 2601017.636 2600475 2602819 - gene protein_coding_gene TRUE TRUE AT5G08120.1 myosin heavy chain-related similar to MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G16000.1); similar to microtubule-associated protein [Nicotiana benthamiana] (GB:ABB97536.1) 0.0888253163587605 0.863400217536342 0.407063090204205 1 0.410675970484148 13.2899729044446 0.0888253163587605 0.106514231978584 AT5G02420_at 2.96278256535427 2.84437606108680 3.30502545574219 3.52518200250032 2.72762843974182 3.40543915638914 2.57674387461992 2.92511678989600 3.03083750422527 3.28782377862392 3.67709980080744 3.59688744855878 3.47366805011507 3.57857997912404 2.85100582762625 3.59250044245105 3.51242715075977 3.70249313340272 3.08793605147672 0.22195338256007 0.232164341379962 0.228959647836991 0.222759107644821 0.221552285703290 0.228681159904548 0.228716971394571 0.231990875594754 0.238127990113675 0.224385442554053 0.220851897599017 0.221944286026878 0.221477657381102 0.221701069706762 0.223274012891707 0.228964373607342 0.227733832814749 0.229774287696630 0.224298189711658 5 5 + 523542 523799 523666.455 523387 524074 + gene protein_coding_gene TRUE TRUE AT5G02420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08180.1) -0.100353766588767 -0.861225648650277 0.408206687285155 1 0.408901903974723 6.35084438010678 -0.100353766588767 0.138798046316046 AT5G23190_at 1.49395386097741 1.14801744711264 1.62282621801115 1.97411859723025 1.53471407363409 1.37892851338679 1.58890670459654 1.23812509670693 1.50462567069981 1.28786487566267 1.37682975778121 1.46816719440969 1.54448948278628 1.48530563807759 1.5919410770556 1.22495844309762 1.79467672668732 1.70944607664837 1.41040878987143 0.204262756852795 0.213647362534595 0.208890678148738 0.204262756852795 0.204262756852795 0.210989883224189 0.206048085767735 0.210451509216553 0.208441381883149 0.209691172395845 0.217188835591385 0.205038552601912 0.208708646453054 0.209471891738145 0.215173482870498 0.204262756852795 0.207167660864923 0.211819036332821 0.206625468867473 5 5 - 7803577 7804420 7803836 7803144 7805818 - gene protein_coding_gene TRUE TRUE AT5G23190.1 CYP86B1 (cytochrome P450, family 86, subfamily B, polypeptide 1); oxygen binding cytochrome P450 CYP86B1, nuclear gene for chloroplast product similar to cytochrome P450 family protein [Arabidopsis thaliana] (TAIR:AT5G08250.1); similar to Os10g0486100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064901.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE89065.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0891016179678039 0.86077958933851 0.408441539130389 1 0.408538472913550 2.96017043644661 0.0891016179678039 0.108127347957738 AT5G52680_at 0.824765768415962 1.01954188189533 1.00801287830309 1.35570198694199 0.862975025387968 1.16861870951718 0.773255403710913 0.95707505576023 0.275302468612456 0.877892760475479 0.327170012638779 0.67937686302889 0.627211418079865 0.796632021419177 0.942731091370679 0.674237948683796 1.12364224348480 0.717244137382573 0.816483214009945 0.233484095117317 0.225606542240673 0.233672624153231 0.228956237851665 0.224598710376280 0.229958534599163 0.224598710376280 0.224598710376280 0.226430366758566 0.233747384768289 0.226551156516823 0.225177629650570 0.232034557791659 0.232708965059087 0.232862351871687 0.226564350217177 0.228501800864791 0.238590497606869 0.229314563036121 5 5 + 21383292 21384065 21383731.455 21383039 21384089 + gene protein_coding_gene TRUE TRUE AT5G52680.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52690.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.0840419702659617 0.860743408765414 0.408460592378344 1 0.408509001541638 1.69253843776343 0.0840419702659617 0.0925532157301145 AT5G59000_at 3.02069534636404 3.14039018402515 2.93775066516028 3.45821648691498 3.88057391249097 3.32813728952612 3.25551891583028 3.33260785844227 3.65385964212874 3.32342522985771 4.56328133701072 4.21178118255942 4.0153086912594 4.37385305982913 4.63525316074117 3.99478403782679 3.55596023982577 4.14181525975949 3.1576541480708 0.206112078110214 0.200331067067626 0.212504846053418 0.200587783161577 0.202093988886634 0.213855843445365 0.210298402399833 0.20668218246161 0.213478641826081 0.200331067067626 0.208749237538624 0.204109174876837 0.204830301982247 0.203409748856675 0.214750556687987 0.203700557246647 0.210957141152320 0.203718734551047 0.200331067067626 5 5 + 23836107 23837207 23836775.909 23835980 23837463 + gene protein_coding_gene TRUE TRUE AT5G59000.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G05830.1); similar to Zinc finger, C3HC4 type (RING finger), putative [Medicago truncatula] (GB:ABE88153.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0982663784482866 -0.860315973894453 0.408685732115636 1 0.408160909305172 7.07664514623788 -0.0982663784482866 0.13363814649528 AT5G57440_at 4.62143154980707 4.70411976844812 3.47385150758230 4.44158785427792 5.6405603517193 5.52780058353333 4.44659366689248 4.58659725317897 4.98682711321931 4.25500113278071 6.41011785116096 6.43041471329345 5.30630040656908 6.3638575873306 6.76266675103181 5.52558157885062 5.6503498757431 6.07842326969504 4.6057743334228 0.259837469951779 0.249726882097524 0.268434438466854 0.254020858296271 0.244546662845528 0.262204261563612 0.249449283024557 0.242366289885603 0.255300043411060 0.242387973247385 0.246576018892505 0.242278914554019 0.246668069081694 0.242278914554019 0.249375002391155 0.242278914554019 0.253050337869413 0.243259628254934 0.249249944674176 5 5|0 -|/ 23288794 23289646 23289252.2 23288353 23290155 - gene protein_coding_gene TRUE TRUE AT5G57440.1 GS1 (GLYCEROL-3-PHOSPHATASE 2); hydrolase a member of haloacid dehalogenase-like hydrolase family similar to GPP1 (GLYCEROL-3-PHOSPHATASE 1), hydrolase [Arabidopsis thaliana] (TAIR:AT4G25840.1); similar to HAD-superfamily hydrolase subfamily IA, variant 3; Epoxide hydrolase N-terminal domain-like phosphatase [Medicago truncatula] (GB:ABE82173.1); contains InterPro domain HAD-superfamily hydrolase subfamily IA, variant 3; (InterPro:IPR006402); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834) -0.113252884117489 -0.860025803181464 0.408838619948155 1 0.4079246862389 10.0212335822717 -0.113252884117489 0.170936205804751 AT5G15530_at 2.08426788035558 2.39284260029273 2.54060289607084 2.71148918278143 2.37335893399324 2.95011271054775 2.74399405945859 3.18832200155164 3.53119542633732 2.9995010187171 4.15345257001605 4.33537152684665 3.25258922803319 4.04552224326115 4.08436822057448 3.09578321939134 3.44787901081586 3.80561655334407 2.8544862968034 0.234559986078347 0.234559986078347 0.247278667741509 0.240398246394836 0.259475346251454 0.252422961884382 0.240215538037184 0.264449573741446 0.242653704236232 0.234559986078347 0.244191312278302 0.249724027072419 0.236822039053256 0.245061526555158 0.241278113056242 0.238222572071686 0.240748801541911 0.254839878450316 0.254925682467898 5 0|5 /|+ 5039473 5040278 5039767.125 5038754 5040843 + gene protein_coding_gene TRUE TRUE AT5G15530.1 BCCP2 (biotin carboxyl carrier protein 2); biotin binding biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA, similar to BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A (BIOTIN CARBOXYL CARRIER, BIOTIN CARBOXYL CARRIER PROTEIN 1), biotin binding [Arabidopsis thaliana] (TAIR:AT5G16390.1); similar to biotin carboxyl carrier protein [Brassica napus] (GB:AAS46758.1); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin-binding site; (InterPro:IPR001882); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Single hybrid motif; (InterPro:IPR011053) -0.100666597728412 -0.859899936989508 0.408904949631804 1 0.407822242001506 6.07610731754212 -0.100666597728412 0.140002476504718 AT5G53190_at 1.17655685760323 1.40088718137071 1.35685194784794 1.96032816093121 1.79724970400674 0.90732930740692 1.56397901366351 1.26285086066280 1.79056410724788 1.63560029121012 1.67170117105548 1.71704741095224 1.62724630727362 1.51604534609682 1.17966233591538 1.61841734991108 1.46639967218413 1.30595747311824 1.68197861178059 0.200439265570784 0.196936092493285 0.205474137182522 0.199279343362215 0.198714409864212 0.198224093473311 0.196936092493285 0.204102398095117 0.197501647059228 0.196936092493285 0.201047366749479 0.204079236471542 0.206113675714803 0.201707007249152 0.199583948280408 0.196936092493285 0.197571177696246 0.197210939542319 0.204069566393947 5 5|0 -|/ 21589806 21590980 21590629.5 21589477 21591555 - gene protein_coding_gene TRUE TRUE AT5G53190.1 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT1G21460.1); similar to MtN3/saliva family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95863.1); similar to Os01g0881300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044998.1); similar to Os01g0541800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043270.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) -0.12438737657475 -0.858749595001208 0.409511503706205 1 0.406886560014429 3.03601611421642 -0.12438737657475 0.197095823732741 AT5G42030_at 8.73316097021765 8.90905331779382 9.76288526124213 9.89515204608533 10.2999360141158 9.65835286223076 9.66033256976557 9.1929857105002 9.04333558955936 9.26379941430397 9.99297756757904 10.1958781930282 9.95305821166488 9.88787175802023 10.0920277789409 10.0912552783075 9.53725196723892 10.2811800425007 9.17000323410207 0.141986883318686 0.132498814492230 0.135602028464840 0.136127499540576 0.127285719971991 0.138333323520762 0.127285719971991 0.132482271246369 0.149104472928438 0.13353324562601 0.131383438933913 0.127285719971991 0.127285719971991 0.137387358375877 0.136312872921948 0.128284976304442 0.149190214575188 0.131362027813964 0.132013703054895 5 5|0 -|/ 16829031 16829816 16829445.7 16828612 16830411 - gene protein_coding_gene TRUE TRUE AT5G42030.1 ABIL4 (ABL INTERACTOR-LIKE PROTEIN 4) Identical to Protein ABIL4 (Abl interactor-like protein 4) (AtABIL4) (ABIL4) [Arabidopsis Thaliana] (GB:Q9FHY1;GB:Q8LG96); similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) [Arabidopsis thaliana] (TAIR:AT5G24310.1); similar to Probable protein ABIL3 (Abl interactor-like protein 3) (GB:Q5NB83); similar to Os01g0236400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042529.1); similar to Os01g0551800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043308.1) 0.101469418331545 0.858297343727823 0.409750135432474 1 0.406518996227362 19.0954741834848 0.101469418331545 0.142544386832486 AT5G03345_at 9.22007723061262 9.47653815573186 9.80531772753167 9.73622330686957 10.2340569855379 9.72321250336905 9.4015943940389 9.3443642364247 9.32377153652856 8.98946293067078 10.0329965846044 10.1223425741806 9.87191486385462 10.0315010306668 9.92415814140844 9.77433763705897 9.20418232740157 9.87206625052525 9.04491034885065 0.106448255948958 0.103327514523343 0.102909455195837 0.102487940957863 0.103837685183269 0.105838114000382 0.104114153180547 0.106307421220156 0.115237332530489 0.106756682412518 0.102976707696022 0.102487940957863 0.106707155906402 0.104121304337074 0.107088659440478 0.102487940957863 0.115839144440502 0.104561922432553 0.103297014842389 5 5|0 +|/ 814215 815448 814751.6 814084 815618 + gene protein_coding_gene TRUE TRUE AT5G03345.1|AT5G03345.2 similar to PREDICTED: similar to CG15168-PA [Apis mellifera] (GB:XP_001121144.1); similar to Os12g0566400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067053.1); contains domain FAMILY NOT NAMED (PTHR21181); contains domain gb def: Hypothetical protein (PTHR21181:SF6) -0.0861686475530667 -0.858036026774322 0.409888063313707 1 0.406306688770858 19.1044575832958 -0.0861686475530667 0.100130275054797 AT5G08200_at 4.10405448976375 4.22362097128594 4.70446566042197 4.60702008894975 5.28333837470268 4.6996717156941 4.46891891144786 4.87054492442775 4.75755554174567 4.31728266725984 6.11549669238996 5.915831938969 5.63852709450159 5.67320710305653 5.76519504572752 5.66029459815149 4.90137540197535 5.58117690460987 4.26139112714878 0.211656624863289 0.218547604442786 0.215148213228234 0.213302019929234 0.209465510544743 0.217287483741699 0.214765509547871 0.21795896315314 0.216470758725841 0.217104248217283 0.208635076769939 0.208635076769939 0.216076892350770 0.214199112175813 0.211065198564055 0.208635076769939 0.221545788852862 0.214035374848052 0.216609035316745 5 5 + 2639939 2640424 2640186.636 2638037 2640825 + gene protein_coding_gene TRUE TRUE AT5G08200.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23130.1); similar to Os10g0485500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064897.1); similar to LysM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93589.1); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) -0.0949378615411398 -0.857860720286384 0.409980611032319 1 0.406164291846941 9.6711033301571 -0.0949378615411398 0.125480981600761 AT5G40410_at 1.34650452226993 1.49063613902487 2.43469161925862 2.39259365834608 1.46643980387165 1.95708195500366 1.54035566000664 1.80511075099667 2.10791840216946 1.84940206467931 1.80094257452185 1.60346816140328 2.02104066229080 1.66990046850034 1.61185916683348 1.50680997366628 2.20765042474125 1.91999531201714 1.60545716585667 0.197930183950166 0.200300256418492 0.200386527622823 0.194763929752199 0.193222563512341 0.199786723652291 0.194488394964389 0.195349338329234 0.200274267130621 0.195036005362825 0.196922890937793 0.193222563512341 0.201716317044510 0.200102079116670 0.193222563512341 0.201146097982506 0.195410082061509 0.196947633381983 0.196110689144656 5 5 + 16189896 16190407 16190102.273 16188602 16190454 + gene protein_coding_gene TRUE TRUE AT5G40410.1 binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G08070.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0859002113243683 0.856041987160528 0.410941596148344 1 0.404688459222545 3.62766054054657 0.0859002113243683 0.0999188226402527 AT5G67600_at 9.93627702063284 10.193992305811 11.267979309827 11.3697441338753 10.9207208394440 10.7633577879585 10.4703302904579 10.6528598405705 10.4814983254422 10.218567224637 11.1256130718739 11.2981356406087 10.5423799986979 10.6464557200791 11.1770838949277 10.9385978721733 10.5420394522618 10.9625538100783 10.2053692513539 0.0716616383326619 0.0696647779657852 0.0708439629714005 0.0713665305804047 0.0702930219723599 0.0773574299799138 0.0723236364458033 0.0716871837792357 0.0740781481742797 0.0723489138302197 0.0737699010615993 0.0698577846585035 0.0727144502505834 0.079008409740675 0.0710079986242729 0.0696647779657852 0.0727596383882239 0.0736206635836286 0.0732237528671611 5 5|0 -|/ 26976980 26977419 26977221.111 26976795 26977549 - gene protein_coding_gene TRUE TRUE AT5G67600.1 similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G49840.1); similar to XYPPX repeat [Medicago truncatula] (GB:ABE79588.1); contains InterPro domain XYPPX repeat; (InterPro:IPR006031) 0.0756686606287185 0.85558679101459 0.411182353243242 1 0.404319506695186 21.2998672076048 0.0756686606287185 0.0635498136317428 AT5G22330_at 5.82022022332828 5.97443436866405 6.95743859615946 7.39386093925413 7.98776608422816 7.23428346782627 6.35221783154913 5.94484788248875 5.35056446154704 5.34465801759701 5.94594125042832 6.31827158889062 6.60894276249577 6.19479605062477 6.2009490418696 6.52353881328792 6.3131169744164 6.60342921548336 5.49701674520564 0.246416582118987 0.243167199335449 0.239289648422871 0.245132644058484 0.232761515733736 0.252719318951348 0.233496216786566 0.234161770623164 0.238164641454589 0.232936318277984 0.233174405226049 0.228686316907583 0.238506117780828 0.234236779381078 0.228686316907583 0.228686316907583 0.249000212880429 0.235116062991984 0.228686316907583 5 5|0 -|/ 7391237 7392103 7391696.889 7390799 7394197 - gene protein_coding_gene TRUE TRUE AT5G22330.1 ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); ATP binding / DNA helicase/ nucleoside-triphosphatase/ nucleotide binding similar to DNA helicase, putative [Arabidopsis thaliana] (TAIR:AT5G67630.1); similar to putative RuvB-like protein 1,49-kDa TATA box-binding protein-interacting protein [Oryza sativa (japonica cultivar-group)] (GB:BAC83028.1); similar to putative Ruv DNA-helicase [Cicer arietinum] (GB:CAB76908.1); similar to Ruvbl1 protein [Xenopus laevis] (GB:AAH71105.1); contains InterPro domain Molybdopterin cofactor biosynthesis MoaC region; (InterPro:IPR002820); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain TIP49, C-terminal; (InterPro:IPR010339); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.111642438153090 0.855577587965934 0.411187221803731 1 0.404312049042039 12.5761518176724 0.111642438153090 0.168489205245057 AT5G48970_at 5.88588039360876 5.72252003312601 7.0373323395823 6.43898018407778 7.07343103162392 6.55357933717735 6.11327425620783 5.65031502790537 5.02438519511324 4.86270704185211 6.233455292876 6.25803053551462 5.7661892547818 6.05550383629428 5.83267182031013 5.94546522155946 5.8792680845798 5.61621391359423 5.27719032225669 0.222065657466444 0.210461942336127 0.216633755853976 0.213932641824034 0.214751202943550 0.219570950182907 0.219260496999186 0.224328312745646 0.235348954760481 0.218775822279459 0.23171300398094 0.210154016090245 0.221485250223786 0.217651476609721 0.216764874093078 0.213232906120373 0.213750855282841 0.223991710659975 0.223269237949348 5 5 - 19874278 19875602 19875011.364 19874056 19876989 - gene protein_coding_gene TRUE TRUE AT5G48970.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G21390.1); similar to Os01g0934200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045309.1); similar to Mitochondrial FAD carrier protein (ISS) [Ostreococcus tauri] (GB:CAL56581.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.108630527915345 -0.855154486082059 0.411411091866496 1 0.403969264723244 11.8109693744201 -0.108630527915345 0.161348668275385 AT5G05690_at 10.9771429591481 11.2821512082387 11.5486537040649 11.6521135958741 12.0204520486493 12.0463907450476 10.8892657330711 11.2173406851594 11.9232690783285 11.7807477193497 12.5398024983679 12.3689765606750 12.5761974169928 12.3275794952799 12.1615383029444 12.3519532824376 12.1653575250905 12.0793218863756 11.8445641543569 0.0741839901134076 0.0710973173529542 0.0725018489667063 0.0724252827532113 0.0718093986270755 0.0746205442097503 0.0728248757434126 0.0717864089497101 0.0811299951075546 0.0717192546805748 0.075900132803377 0.0710973173529542 0.0710973173529542 0.07263983599644 0.0713237139743389 0.0710973173529542 0.0824177197266183 0.0749504356193317 0.0730338079316435 5 5 - 1702908 1705539 1703415.455 1702689 1706788 - gene protein_coding_gene TRUE TRUE AT5G05690.1|AT5G05690.2|AT5G05690.3 CPD (CABBAGE 3); oxygen binding|CPD (CABBAGE 3) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to DWF4 (DWARF 4) [Arabidopsis thaliana] (TAIR:AT3G50660.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); similar to cytochrome P450 [Vigna radiata] (GB:AAF89209.1); similar to cytochrome P450 [Nicotiana tabacum] (GB:CAD27417.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to DWF4 (DWARF 4) [Arabidopsis thaliana] (TAIR:AT3G50660.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128)|Identical to Cytochrome P450 90A1 (EC 1.14.-.-) (CYP90A1) [Arabidopsis Thaliana] (GB:Q42569); similar to CYP90D1 (CYTOCHROME P450, FAMILY 90, SUBFAMILY D, POLYPEPTIDE 1), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding [Arabidopsis thaliana] (TAIR:AT3G13730.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAZ05071.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0797180358389271 0.854882199894685 0.411555206763341 1 0.403748743919243 23.5396227624227 0.0797180358389271 0.0796878622692433 AT5G57590_at 2.91176783177382 2.18202080885033 3.47488224069594 3.21209189527902 3.28515350078626 3.67561556929967 3.22900409284989 3.23840532098248 3.41660139615957 3.63982251879511 3.82890062436827 4.51626283280769 4.01822067726045 4.14806386618098 4.36869521100183 4.38164970130699 4.08562860934063 3.78268448709637 3.92590856702395 0.208931132502953 0.205870729767731 0.207198034558236 0.209333114502541 0.206824543108607 0.21498231630439 0.209387316803248 0.207313819977287 0.213204643386120 0.210473981569202 0.211327536954585 0.208809430955055 0.211082894795418 0.210349099298185 0.204294455574836 0.204341747911834 0.213091606870874 0.205148368638729 0.207641511501028 5 5 - 23335864 23336777 23336377.818 23335734 23338765 - gene protein_coding_gene TRUE TRUE AT5G57590.1 BIO1 (BIOTIN AUXOTROPH 1) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. similar to acetylornithine aminotransferase, mitochondrial, putative / acetylornithine transaminase, putative / AOTA, putative / ACOAT, putative [Arabidopsis thaliana] (TAIR:AT1G80600.1); similar to Os08g0245400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061354.1); similar to Alanine-glyoxylate aminotransferase AGT2 (ISS) [Ostreococcus tauri] (GB:CAL56482.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814) -0.104093878606737 -0.854693638571759 0.411655028120029 1 0.403596066161106 7.05213803014631 -0.104093878606737 0.150282656178043 AT5G43030_at 1.01674988832943 1.21106296733467 1.71944345560959 2.02268354349807 1.01377314284230 1.26992900063605 0.790552234004409 1.18111745964043 0.900242896596933 1.88624202332105 1.20478267966867 1.06571342508608 0.767908575572374 0.91546993585481 1.04101085450496 0.799706537091307 1.32111516961097 1.61129891089011 1.85758974292178 0.193879461933826 0.196965296815659 0.198064500638454 0.197051059216525 0.200248235493564 0.194668775559752 0.195794658921715 0.201967191762331 0.199319804200446 0.196085037318900 0.199717297294097 0.193879461933826 0.204856262656831 0.197595907472196 0.196053196347484 0.199158539453806 0.210097219927305 0.194182349334183 0.203303270995583 5 5 - 17276239 17276760 17276454.727 17276219 17277913 - gene protein_coding_gene TRUE TRUE AT5G43030.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43040.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, ZZ-type; (InterPro:IPR000433); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.0863883107601448 -0.853973961616155 0.412036165025750 1 0.403013611678867 2.59761428581095 -0.0863883107601448 0.102068389286259 AT5G47110_at 11.1487522530284 11.2620565236337 11.5344938758169 11.4530960917745 11.9183647801778 11.6438960942903 11.5943858731183 11.5480093002071 11.3560719218151 11.6730110987637 12.4250720904914 12.3050574625552 12.0984177234440 12.2253073407928 12.2897559684879 12.2044999207707 11.9180844133649 12.0196377344468 11.5638762803492 0.0854406683174988 0.0828495976272193 0.0818144949208753 0.0828705858152827 0.0822644104377723 0.0865678138859434 0.08245921975619 0.0831371876772263 0.0960119775720995 0.0804682445292685 0.0804682445292685 0.0814837921741292 0.0804682445292685 0.0837503766889315 0.0806955556352888 0.0822706302862962 0.0884290706895667 0.0877985504356221 0.0804682445292685 5 5|0 -|/ 19151565 19152246 19151859.444 19151213 19152544 - gene protein_coding_gene TRUE TRUE AT5G47110.1 lil3 protein, putative similar to LIL3:1, transcription factor [Arabidopsis thaliana] (TAIR:AT4G17600.1); similar to Lil3 protein, putative [Brassica oleracea] (GB:ABD64919.1) -0.0733863726251267 -0.853526436312914 0.412273292919388 1 0.402651630190168 23.3712396067243 -0.0733863726251267 0.0538829263521 AT5G51270_at 1.25329580710555 1.03091282937753 1.05700683986984 1.10749461220951 0.952460165810842 1.08243299706658 1.01075464507297 0.878054447035162 1.51047462987811 1.19323368014562 1.20344724496596 1.20616576703195 1.29389312035985 1.26238965165360 1.66043606718676 1.25044930335334 1.52699776685940 0.77771704554717 1.11551121731887 0.205496344507313 0.20072499350385 0.198868005514879 0.202897211668642 0.204487103354671 0.197260916696760 0.206754103529659 0.197260916696760 0.215646209180401 0.208667631393501 0.197260916696760 0.200023041876254 0.197969670560631 0.203480179501800 0.201071850249797 0.199511140671012 0.203484584057349 0.210344368367971 0.197260916696760 5 5 - 20852382 20852999 20852681.909 20852363 20855488 - gene protein_coding_gene TRUE TRUE AT5G51270.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G25160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G61550.1); similar to U-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93477.1); similar to Os10g0561500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065387.1); similar to Os06g0140800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056754.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain U box; (InterPro:IPR003613) -0.0727245675551146 -0.8526744389127 0.412724992749898 1 0.401962942767853 2.31943162876881 -0.0727245675551146 0.0508985167461893 AT5G03540_at 9.680988529602 9.66723278725013 10.3188267894973 10.1620252147105 10.5085498153981 10.2143480780055 9.40355607589673 9.38933022956299 9.90774587110695 9.53193327550674 10.5197472649040 10.2489163909757 9.99684829803276 10.1887453389368 10.0787848048205 10.0526830912272 9.88866243728815 10.1305031826105 9.67567444836524 0.153598861071304 0.149251774982314 0.156083764021796 0.151159421876184 0.157868733254278 0.166704603244357 0.160462846366369 0.161259398009911 0.170902135871825 0.161216983154120 0.149251774982314 0.149251774982314 0.155446153740042 0.155624706978104 0.157533287808671 0.149251774982314 0.168938236075198 0.16117867726638 0.158600005500376 5 5|0 +|/ 893210 893666 893493.8 889565 894166 + gene protein_coding_gene TRUE TRUE AT5G03540.1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1); protein binding AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree similar to ATEXO70A2 (exocyst subunit EXO70 family protein A2), protein binding [Arabidopsis thaliana] (TAIR:AT5G52340.1); similar to Os11g0157400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065801.1); similar to H0723C07.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86037.1); similar to Os04g0685600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054320.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) -0.0741125768680346 -0.852503773783318 0.412815513972342 1 0.401825061808187 19.8397217980366 -0.0741125768680346 0.057794296680547 AT5G38770_at 1.15578474645370 1.52376557946731 1.67182843378522 1.75865836111772 1.57318454661434 1.38624940962810 1.38803940271340 2.10829659265152 2.59246948977382 1.86348995229358 1.98748243736248 2.65573726967221 1.83579201566808 2.55463047668677 1.94378765978615 1.78028358509074 1.03903831786482 2.52756908045588 1.59490675771864 0.205767996168946 0.208251023841136 0.218117279879177 0.211970578776114 0.206298001022874 0.204891246617875 0.2152817440777 0.219638635174498 0.209822416817278 0.208340684511698 0.216401421178478 0.210129482821758 0.204891246617875 0.204891246617875 0.209065417100734 0.207181941968244 0.211989094947434 0.215207834261477 0.210057274547660 5 5 + 15543346 15543613 15543466.091 15543344 15543637 + gene protein_coding_gene TRUE TRUE AT5G38770.1 unknown protein -0.101393734959762 -0.851407501632533 0.413397301141744 1 0.400939946914832 3.59947363667995 -0.101393734959762 0.144442549950494 AT5G57870_at 9.64119244590286 9.39739630421932 10.2238020111792 10.2146398246290 10.1030012989116 10.026472028932 9.5877933380369 9.60158687955728 8.92719720625851 9.262255555729 9.81634778538193 9.8602271502428 9.94117912577108 9.60229098617136 9.69214462420286 9.6663220822733 9.85308445385292 9.79960805803033 9.12560465241194 0.0716160483829875 0.0711625379130743 0.0707675859479372 0.0714198431580867 0.0725217991526544 0.0748386817671648 0.074325053435068 0.0771800674495222 0.0898506524790438 0.0754448916631073 0.0758502356208285 0.0707837047926577 0.0710324731710252 0.0707675859479372 0.081995624415108 0.0724174088707769 0.0729150616852352 0.075951412106164 0.0795757255571442 5 5 + 23460073 23460613 23460341.455 23456724 23461007 + gene protein_coding_gene TRUE TRUE AT5G57870.1|AT5G57870.2 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative similar to MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G24050.1); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE79486.1); similar to Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) (GB:Q03387); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE78808.1); contains InterPro domain Initiation factor eIF-4 gamma, middle; (InterPro:IPR003890); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) -0.0713947332206348 -0.851064196991051 0.4135796059462 1 0.40066296941696 19.291445352108 -0.0713947332206348 0.0443126379906357 AT5G63700_at 6.17669398820538 6.26864320190456 7.66051701636862 7.30866750850465 7.97304853317845 7.38789226239642 7.71373610662551 7.17645135326167 6.6669886852666 6.84872211855163 8.10468701717284 7.92658664699461 7.90271225414267 7.57165497365349 7.7046461214181 7.86276737199704 8.01803355389429 7.9012681731959 6.91964748296522 0.152582802998171 0.162201222903359 0.150201037064565 0.146564003460062 0.145097670450140 0.150912071482905 0.150729530595112 0.143255753092345 0.171191408131750 0.153384646213334 0.146808113116236 0.143255753092345 0.149273207400509 0.156101420376123 0.149582362253092 0.143255753092345 0.145532868399702 0.154761255679713 0.155821424101221 5 5 - 25511173 25512449 25512014.545 25511160 25514858 - gene protein_coding_gene TRUE TRUE AT5G63700.1 zinc finger (C3HC4 type RING finger) family protein similar to SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08430.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT44245.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Plus-3; (InterPro:IPR004343); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) -0.103945795900230 -0.850497832437673 0.413880481363461 1 0.400206238172977 14.5511215511322 -0.103945795900230 0.151196256528173 AT5G17080_at 1.56674914985021 1.32246317066086 2.08865833612121 1.80877991803556 1.29593226409618 1.57138702661235 1.28635526095209 1.44408377173746 2.00299644208656 1.69151258550258 1.68639947399328 1.50549701663225 1.78564477932004 1.50398977252881 1.47640161182549 1.42763654585412 1.64180310901476 1.73057369025189 1.72609927972753 0.186025015018354 0.187897005881565 0.187186831112402 0.185048883155958 0.18351450101312 0.187649478149944 0.193241749685756 0.18351450101312 0.187314193724074 0.185168187335088 0.183817958647105 0.185197464681277 0.187653055449418 0.191544487954063 0.193153579014687 0.188793152792536 0.195924569506818 0.19258133542633 0.18466771518098 5 5 + 5620179 5620928 5620583.182 5619597 5620952 + gene protein_coding_gene TRUE TRUE AT5G17080.1 cathepsin-related similar to cysteine proteinase-related [Arabidopsis thaliana] (TAIR:AT5G17140.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128) -0.0806458458235495 -0.850169383329855 0.414055034653826 1 0.399941488321631 3.24885745510814 -0.0806458458235495 0.0845600369995673 AT5G25480_at 2.0100766959307 2.36140919352180 3.02255174209219 2.93759209404072 3.27915411891148 2.32843388446814 2.52193082438782 2.48063533804167 2.33188858576711 2.59061203984682 2.62663814502816 2.53241616328024 2.82733411927468 3.02631783431652 2.67136808556625 2.96235656393995 2.31939730931308 2.52195084393235 2.29564569685090 0.180003812749541 0.178466533728636 0.179903791088144 0.182934756274684 0.183469579670027 0.18508385091773 0.178466533728636 0.186298655624741 0.187530760660377 0.178958965253947 0.185803020081806 0.185199254545671 0.182345117886109 0.180811556876772 0.178665646619368 0.178466533728636 0.186189240023626 0.178928250533514 0.180687322112231 5 5|0 -|/ 8870078 8871022 8870635.7 8869876 8872265 - gene protein_coding_gene TRUE TRUE AT5G25480.1 DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro. similar to DNA methyltransferase ZMET4 [Zea mays] (GB:AAK40306.1); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525) 0.114086384234724 0.849719900544723 0.4142939918695 1 0.399579320963034 5.16373356504249 0.114086384234724 0.176161398318430 AT5G63570_at 8.31790390968559 8.4274085527038 9.08036016059383 9.01950173818886 8.67031449973689 8.6301125381536 8.35965709927514 8.49277390044108 8.12782281711335 8.23025104707939 9.34413996105221 9.81760083636271 9.16859216921942 9.27135036462593 10.2976865594801 9.17510279786869 9.1140408921107 9.22665883239664 7.96431179191255 0.165339521226392 0.152268079386769 0.154888697427137 0.150503515170098 0.150052925820369 0.153654276835514 0.153994008332235 0.160503487679804 0.173856835915845 0.162742874319226 0.150288930213457 0.152978878154631 0.1523193235836 0.153817672042875 0.152964312842428 0.151747412021867 0.158583352735883 0.154694241842508 0.160483230955500 5 5|0 +|/ 25470204 25470811 25470564.4 25469101 25471067 + gene protein_coding_gene TRUE TRUE AT5G63570.1 GSA1 (GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE); glutamate-1-semialdehyde 2,1-aminomutase Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced. Identical to Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplast precursor (EC 5.4.3.8) (GSA 1) (Glutamate-1-semialdehyde aminotransferase 1) (GSA-AT 1) (GSA1) [Arabidopsis Thaliana] (GB:P42799); similar to GSA2 (GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2), glutamate-1-semialdehyde 2,1-aminomutase [Arabidopsis thaliana] (TAIR:AT3G48730.1); similar to Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (GB:Q85WB7); similar to glutamate-1-semialdehyde aminotransferase (GB:AAA79123.1); similar to glutamate 1-semialdehyde aminotransferase [Brassica napus] (GB:AAO63783.1); contains InterPro domain Aminotransferase class-III; (InterPro:IPR005814); contains InterPro domain Glutamate-1-semialdehyde-2,1-aminomutase; (InterPro:IPR004639) 0.0695039821113124 0.849658465962206 0.414326659421982 1 0.399529833346875 17.3919332683513 0.0695039821113124 0.0323900339615479 AT5G41490_at 0.595163364396669 0.580645488476569 0.66340098192674 0.64859277907042 0.792049416471788 0.705797632213714 0.507189251912143 0.821975572443999 0.472135889963723 0.739845927954324 0.371800645838917 0.247388562072663 0.641791903607871 0.377141748230685 0.99280415427028 0.442413719026242 0.51128582629617 0.163434791093584 0.562826748944064 0.196420636156949 0.200527736135649 0.197865922350260 0.196016524654998 0.201574855367062 0.199539936090751 0.195727054367462 0.202113680918262 0.202206820120921 0.195727054367462 0.199221036024511 0.199534856713466 0.208305910465743 0.198124683699205 0.196178377028850 0.200793827098017 0.202480507264456 0.200653328591677 0.199393145086758 5 5 + 16618258 16618740 16618442.455 16617673 16618836 + gene protein_coding_gene TRUE TRUE AT5G41490.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G41510.1); similar to Cyclin-like F-box; F-box protein interaction domain; Galactose oxidase, central [Medicago truncatula] (GB:ABE85493.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) -0.0734621234449916 -0.847931137814135 0.415245873215171 1 0.398139676506409 1.19440707307663 -0.0734621234449916 0.0565970375439302 AT5G24313_at 1.31478635294996 1.27842488805135 1.62499511896084 1.96187570201819 1.25826838628815 1.14765780546180 0.864918895352443 1.48524438259087 1.56191921654477 1.57076467691698 1.46776604959070 1.42125057122727 1.32103358328322 1.16775526198154 1.37895720331171 1.17587762706141 1.43199348536052 1.07436313807642 1.55806256893035 0.205563933121696 0.196405466890860 0.20147650875846 0.207332475554467 0.205034460948321 0.210404694099362 0.209801046675435 0.195918692451988 0.206288475867892 0.195793018711248 0.205899557637302 0.195396591129316 0.196157859817251 0.196553755589204 0.202480316073967 0.198235644974228 0.196033833482485 0.206007950439006 0.208346290169888 5 5 - 8277111 8277328 8277230.545 8276788 8277405 - gene protein_coding_gene TRUE TRUE AT5G24313.1 unknown protein -0.0932077220878053 -0.847695936083279 0.4153711448324 1 0.397950574607848 2.80124982601785 -0.0932077220878053 0.123809587736111 AT5G38820_at 0.774187858096583 0.88431731525569 1.56340975769209 1.43087902426925 1.49276172671836 1.21389482924812 1.84787997005966 1.28377202864452 1.88385700256036 2.01248581352742 1.67889246674428 2.21094679615278 2.08541791445662 2.07182678795725 2.20222869697599 1.99816454990706 1.69298270441080 2.19292486737329 1.60051721764682 0.196925704009082 0.185381788673974 0.192909542142603 0.187345737902044 0.188004081764951 0.193498756676780 0.190802243091763 0.189581925058625 0.181750097237521 0.182011642852060 0.192426820876513 0.202770973090340 0.195697466106929 0.188683661871536 0.186553377595491 0.190955000258056 0.196122437676869 0.197907109534047 0.193703194386482 5 5 + 15561730 15562331 15562035.818 15560711 15562412 + gene protein_coding_gene TRUE TRUE AT5G38820.1 amino acid transporter family protein similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G30390.2); similar to Os06g0633800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058132.1); similar to Os06g0275800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057382.1); similar to putative N system amino acids transporter NAT-1 [Oryza sativa (japonica cultivar-group)] (GB:BAD73448.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.089035410119595 0.844541829335107 0.417053537924207 1 0.395419054986775 3.23586770170243 0.089035410119595 0.112907712592506 AT5G16680_at 8.1979485141287 8.23390276126937 8.91714031856371 8.9907124466378 9.1911967418972 9.00811342809164 7.81572638380422 7.77452538395581 7.41223139012697 7.7742135039684 8.31284197247725 8.20088756213954 8.55910628135732 8.16209304244622 7.73834965752599 8.47114217777477 8.42488708693745 8.10987804765408 7.75675542053017 0.151259604279946 0.148363779473703 0.157612309312002 0.155241299208835 0.148943979286248 0.156505095832492 0.153616031582401 0.148283448554969 0.164154651270828 0.144640143432660 0.146745535572907 0.143997032131006 0.153208579342758 0.151168891409632 0.148828477199589 0.148087892313003 0.149873284955981 0.155015064649559 0.151550596977333 5 5 - 5467544 5468078 5467802.364 5467537 5473509 - gene protein_coding_gene TRUE TRUE AT5G16680.1 PHD finger family protein similar to PHD finger protein-related [Arabidopsis thaliana] (TAIR:AT3G02890.1); similar to PHD-finger family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97690.2); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) -0.0694358199535112 -0.843919673337063 0.417385937898962 1 0.39492066885018 16.4637240806674 -0.0694358199535112 0.0354329532335371 AT5G20330_at 0.923190787569176 0.629146041808503 1.10422543280141 1.45041471219646 1.00120727053245 0.988401684930521 0.913278187882025 1.07959079235697 1.29892314788092 1.23281754417338 1.14275936133712 1.2141792074426 1.39426439180383 1.24478163667767 1.30586874575801 1.22872154629470 1.28711978528093 1.21919508050301 1.06426578271317 0.183416771388478 0.17636372608059 0.178143989369881 0.181096526305259 0.18052338791356 0.183415272329263 0.175431491270866 0.181384800162594 0.182007852552317 0.177671465293677 0.178491970584530 0.179845234024937 0.182541542236009 0.178435182304872 0.175431491270866 0.175431491270866 0.187045916979525 0.184485162718851 0.187220332658194 5 5 + 6872068 6872635 6872278.818 6871563 6873114 + gene protein_coding_gene TRUE TRUE AT5G20330.1 BETAG4 ("beta-1,3-glucanase 4"); hydrolase, hydrolyzing O-glycosyl compounds similar to BG5 (BETA-1,3-GLUCANASE 5), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20340.1); similar to Os01g0801500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044540.1); similar to beta-1,3-glucanase [Musa x paradisiaca] (GB:ABJ98942.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) 0.0797255398353879 0.842925254031484 0.417917599140163 1 0.394124735732342 2.23782188591455 0.0797255398353879 0.0837364999028251 AT5G10840_at 8.78455588485295 9.00325374650848 9.3713872984745 9.30624893729651 8.8621551634984 8.72875750664667 8.0814467991897 8.37192372813845 8.27127806765069 7.69075497128401 8.90074714382018 9.52360930175922 8.7146650311752 8.88530462303914 9.18979454653441 8.61666517226822 8.37081711861297 8.892423629541 7.70141143235889 0.137521483269927 0.133997567397725 0.143249944805988 0.136496104915504 0.135218801547221 0.13567053479066 0.139268844069728 0.141006982975498 0.144365611352102 0.141296364035725 0.137873548694452 0.133985534894044 0.135964486680411 0.139818527224790 0.132284682869731 0.131404250721560 0.141977862072199 0.136383878158673 0.141348799391569 5 5 - 3424922 3425477 3425177.455 3424689 3427879 - gene protein_coding_gene TRUE TRUE AT5G10840.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT5G25100.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G24170.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT3G13772.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10383.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD54580.1); similar to Nonaspanin (TM9SF) [Medicago truncatula] (GB:ABE93901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) -0.0755154416600803 -0.842118612526062 0.418349201838886 1 0.393479696094687 17.2010002053799 -0.0755154416600803 0.0679652318397688 AT5G08450_at 7.05708130590831 7.0785125571804 7.73609306885498 7.82727539404516 8.28674819045623 8.00333390723408 7.1989771612133 6.67297332697799 6.98852054093777 6.40665306142127 7.34573074379825 7.60419518563113 7.44236510082432 7.6458430046566 7.21071029128248 7.65155154905765 7.87339662272515 7.4866421517472 6.55317066487002 0.167962404586678 0.166887507279384 0.171303474608571 0.166323204982047 0.161887075727201 0.172102205791934 0.161087065430083 0.180363911605427 0.179145572315493 0.169747022972039 0.160923524448733 0.160923524448733 0.161728404611398 0.167671472561120 0.178850848814411 0.165524504599805 0.161327986185543 0.173799462116535 0.163095446227114 5 5|0 -|/ 2727989 2729023 2728497.667 2727822 2732894 - gene protein_coding_gene TRUE TRUE AT5G08450.1|AT5G08450.2|AT5G08450.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to Os07g0477500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059629.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE80313.1); contains domain LCCL domain (SSF69848) -0.0858505966703742 -0.840374477660111 0.419283449432751 1 0.392086806374353 14.5736255741297 -0.0858505966703742 0.104662625801254 AT5G47030_at 10.2698834070303 10.6215910190355 10.9019892995354 11.1725617706151 11.0843575931258 11.0139695092644 10.9095443653007 11.0686755714980 10.7022500192791 10.6609453623079 11.4637988113289 11.3580469102595 11.1860397857378 11.3410599929637 11.5363817531160 11.1423262434782 11.2116670250450 11.4380916553167 10.5820390138810 0.0767751266072585 0.0721365524466991 0.0759901106864381 0.0721365524466991 0.0729554398693616 0.0771504553853308 0.0745085749398594 0.0721365524466991 0.0823721151486233 0.0758020651441404 0.0721365524466991 0.0725887797137614 0.0741733967383642 0.0748146322880422 0.0746910717104192 0.0731586615914759 0.0771033267076712 0.0743689701032718 0.0742551494719484 5 5|0 +|/ 19107651 19109168 19108136 19107525 19109541 + gene protein_coding_gene TRUE TRUE AT5G47030.1 ATP synthase delta' chain, mitochondrial Identical to ATP synthase delta' chain, mitochondrial precursor (EC 3.6.3.14) [Arabidopsis Thaliana] (GB:Q96252); similar to ATP synthase delta' chain, mitochondrial precursor (GB:Q40089); contains InterPro domain ATPase, F1 complex, delta/epsilon subunit; (InterPro:IPR001469) -0.079086003385405 -0.839864396597169 0.419556940618921 1 0.391679921082773 21.8718655605815 -0.079086003385405 0.0824846369883891 AT5G66290_at 5.45986530529796 5.41933938072155 6.11862289699143 6.2627912808765 6.83809456033542 6.68351861639594 5.25996329636577 5.0833845125556 5.93903705493368 5.27576558201678 6.49463302146959 6.35466689195071 6.29448444891933 6.48510264592886 5.90842399522984 5.97947491124996 6.17195896760758 6.40318115395337 5.38166296534764 0.219598408828749 0.215331679073536 0.214082937849890 0.210472834573474 0.206353925248878 0.213038762891878 0.205089441163638 0.209240171596501 0.211382184130442 0.212788401278627 0.205089441163638 0.205089441163638 0.214281847913206 0.208659037971830 0.207654441276685 0.210161751450497 0.216367891185853 0.205089441163638 0.215290589430964 5 0|5 /|- 26495147 26496332 26495703.889 26494887 26496667 - gene protein_coding_gene TRUE TRUE AT5G66290.1 similar to hypothetical protein [Thellun (GB:ABB45846.1) -0.0711103538197057 -0.839652769196788 0.419670444601382 1 0.391511171318442 11.7875204588449 -0.0711103538197057 0.0481765855109013 AT5G63040_at 4.43535220249153 4.99228204651334 5.67028074970812 5.89435430929877 6.02261815600139 5.20297355670674 6.4976560386493 6.1483869395163 4.02401846204810 5.39581669751412 6.59837731782823 6.36310878859813 6.22058317389375 6.52649930026695 6.01354561685372 7.09707995722587 6.48446062326828 6.06720831894535 5.10838130503833 0.244920874623504 0.236197032141185 0.240384080477583 0.247425708672299 0.243809107622188 0.259974019240344 0.241100119315401 0.234600862384776 0.284539037501807 0.246971779772072 0.236563465875861 0.241665891591579 0.241124063584605 0.25255307544287 0.254951130987205 0.239642279192729 0.241635154444786 0.258590063433141 0.245639276375329 5 0|5 /|+ 25306953 25307515 25307203.222 25305372 25307638 + gene protein_coding_gene TRUE TRUE AT5G63040.1|AT5G63040.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48460.1); similar to hypothetical protein MtrDRAFT_AC124952g33v1 [Medicago truncatula] (GB:ABE93586.1) -0.116301699243284 -0.835812825243578 0.42173354970347 1 0.388455633694848 11.2400363541825 -0.116301699243284 0.185917900342116 AT5G07450_at 1.24787021361622 1.45488082921941 1.67417687941992 1.91744858569633 1.50907419380647 1.69173279731517 1.15769786394271 1.36170912975034 1.77581173283366 1.94073551623675 1.65756450542102 2.02328456735280 1.66471645948484 1.35042973626135 1.53885417312520 1.63830475279922 1.85903535547265 2.23488876316045 1.53530022981949 0.196844069427894 0.197918151469789 0.197916380366739 0.206463838113608 0.199041795206721 0.200496208392929 0.196844069427894 0.200931747225721 0.205330237368213 0.203353335014415 0.200307770677686 0.202856338034653 0.197820394325837 0.200372806476441 0.200618057372079 0.19905658415769 0.204826940391069 0.196844069427894 0.211402339638860 5 5 - 2358423 2359160 2358884.727 2358353 2359309 - gene protein_coding_gene TRUE TRUE AT5G07450.1 CYCP4;3 (cyclin p4;3); cyclin-dependent protein kinase similar to CYCP4,2 (CYCLIN P4,2), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G61650.1); similar to Os10g0563900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065406.1); similar to Os04g0544200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053459.1); similar to PREG-like protein [Oryza sativa] (GB:CAC39033.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Negative regulatory factor PREG; (InterPro:IPR012389) 0.076130488973236 0.835684317685981 0.421802711361712 1 0.388353586973911 3.25007411931148 0.076130488973236 0.0728104295249457 AT5G02160_at 11.1207530986114 11.3507126890826 10.6347553614587 10.7945605105268 11.6015175455180 11.4612774267801 10.7377837542771 10.7600289257126 11.5333544730846 11.2250467051852 12.5411841616014 12.4138245924535 11.9330338242962 12.2553976820419 12.2675359742788 11.7871553252131 11.6034026012558 12.0864440177477 11.1018571035633 0.0826353949635463 0.0796400678369631 0.08464074080876 0.0838066179078673 0.0811635242311262 0.082917516498201 0.084013818328189 0.0868590939314355 0.0883600696517924 0.0796400678369631 0.0832656062082578 0.0831770687565976 0.0839279989610197 0.0862169704264143 0.0849764597212698 0.080843680192779 0.0825440516410034 0.0822626030476187 0.0839835986229106 5 5|0 +|/ 426402 426592 426482.3 426352 427252 + gene protein_coding_gene TRUE TRUE AT5G02160.1 similar to hypothetical protein [Solanum lycopersicum] (GB:BAD95796.1) -0.0718433133102612 -0.834536266410769 0.422420921031023 1 0.387442533269541 22.7565486804820 -0.0718433133102612 0.0543350962525296 AT5G55590_at 2.60317925338559 2.133270473011 2.37036926202624 2.63930012465595 2.23866758870777 2.51125789222662 2.09610067359361 2.04253978101361 2.11993173342328 2.08772528903217 2.58066108267342 2.89656413068371 2.27427059375862 2.34032745101102 2.96411284543235 2.50935498819115 2.71980095632089 2.70989643570179 2.34308828941781 0.200290588305088 0.204618857705682 0.198544252201279 0.198667999566585 0.199756664422335 0.199472262084632 0.200471623660427 0.198401448335231 0.207431618553892 0.197038783877908 0.201281765655157 0.197038783877908 0.208086396647119 0.200678671551297 0.201941623359946 0.197038783877908 0.209242211289565 0.208957075458972 0.200636574573680 5 5 + 22538180 22538820 22538488.909 22537137 22539084 + gene protein_coding_gene TRUE TRUE AT5G55590.1 QRT1 (QUARTET 1); pectinesterase Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47500.1); similar to Os07g0607400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060235.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD65006.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD64977.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) 0.0854568151861878 0.83446961142415 0.422456832508445 1 0.387389671542558 4.73331329662557 0.0854568151861878 0.105309459719284 AT5G64290_at 10.1185573607812 10.0870116857524 10.7473958991150 10.6897126933426 10.4885031160570 10.4533521545811 10.3851808186503 10.4268570505147 10.4322333175020 10.0402133167474 10.9910340723848 10.8814571744413 10.6779090401823 10.8759720164085 10.8717209541147 10.7674144613348 10.6689304672329 10.9630053509882 9.69550823723233 0.090549997189079 0.0804126635265679 0.0859278916795717 0.0830372483747816 0.0848890678631882 0.0814169863304638 0.0844866520496836 0.0800183871759458 0.089374435014281 0.084787166846176 0.0820834467393689 0.0826458839207866 0.0825581161750811 0.0886685879023088 0.0843395842254993 0.0800183871759458 0.0896925701914033 0.0840597285797164 0.087652052184933 5 0|5 /|- 25731995 25732330 25732149.5 25731404 25733984 - gene protein_coding_gene TRUE TRUE AT5G64290.1 DCT/DIT2.1 (DICARBOXYLATE TRANSPORT); oxoglutarate:malate antiporter similar to DIT2.2 (DICARBOXYLATE TRANSPORTER 2.2), oxoglutarate:malate antiporter [Arabidopsis thaliana] (TAIR:AT5G64280.1); similar to glutamate/malate translocator [Spinacia oleracea] (GB:AAM89396.1); similar to glutamate/malate translocator [Nicotiana tabacum] (GB:AAM89397.1); similar to glutamate/malate translocator [Flaveria bidentis] (GB:AAM89395.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) -0.0665427084572157 -0.83324385529672 0.423117594596236 1 0.386418220437763 20.8711540469975 -0.0665427084572157 0.0147807124389065 AT5G22650_at 8.96722214088935 8.96147004223132 9.77321554586565 9.70437273838595 9.39328598543937 9.31490056202644 9.41630140251656 9.21147056808342 7.4834755842995 8.25508905126302 8.70039237413244 9.28542714276443 9.15716742072422 8.64429128851456 9.24877208024 8.8879200105059 9.48132537287739 8.88110233922335 8.30690451026456 0.156910358580139 0.159530138353597 0.159317932356190 0.159289804664213 0.161888506350811 0.160741920341523 0.158004535857895 0.165427977814122 0.201959633319426 0.170034409743113 0.167327250629762 0.156910358580139 0.157067894910863 0.170983624372896 0.16229654206302 0.163878679629353 0.163236345717460 0.162097107117284 0.167020373842644 5 0|5 /|+ 7535105 7535851 7535637.875 7534020 7536276 + gene protein_coding_gene TRUE TRUE AT5G22650.1|AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B) Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Identical to Histone deacetylase 2b (HD-tuins protein 2) (HD2B) [Arabidopsis Thaliana] (GB:Q56WH4;GB:O49209;GB:Q9FNJ6); similar to HD2A (HISTONE DEACETYLASE 2A), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G44750.1); similar to histone deacetylase HDAC2 [Triticum aestivum] (GB:ABG43091.1) -0.0691588499214768 -0.832961219131173 0.423270052229432 1 0.3861943979747 17.8682579409623 -0.0691588499214768 0.0397921745397423 AT5G03780_at 3.98587160985698 3.58551089308345 4.42662122035174 4.72316158094029 4.37690329355132 4.35789022109629 3.31095622088010 3.72691010925529 3.78714266342553 3.63400107733152 4.73532256385938 4.29599597150560 4.12272085100214 4.11735248623686 3.61427746218166 4.32753283862637 4.5795935839391 4.80133534307185 3.992663997965 0.234068577316744 0.231355389869455 0.249945015409328 0.230882958855772 0.253354013335676 0.236949122457986 0.229713521120536 0.234074503927044 0.234879620273118 0.23835691649941 0.228498901752149 0.235950760264048 0.235340968812807 0.22816625678252 0.229596366380611 0.24531252332087 0.245828098862346 0.241999480955813 0.235469750151880 5 5|0 -|/ 999279 999920 999676.2 999101 1001028 - gene protein_coding_gene TRUE TRUE AT5G03780.1 TRFL10 (TRF-LIKE 10); DNA binding Encodes a protein whose sequence is similar to human telomere proteins. This belongs to TRFL family 2, which do not show DNA binding in vitro. similar to DNA binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G01150.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95463.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0875470743779633 -0.832152512731657 0.423706482683682 1 0.385554339159343 8.12616262719038 -0.0875470743779633 0.112366196662018 AT5G08300_at 10.0542664250566 10.2151579942304 10.8796515696397 10.8985541874915 10.4090998169698 10.1467852030672 9.56763027862111 9.78561428982255 9.50526303795967 9.38951847617383 10.2243067011600 10.3007769721746 10.1064295551620 10.0360077767358 10.2425676297005 10.1867198197255 9.91727236917416 10.0896960554312 9.1084309585031 0.084636746079314 0.084636746079314 0.0855450938105598 0.0846437796336319 0.0850501858526092 0.0884454436627549 0.0866762065342498 0.0846511536977295 0.0875441399991325 0.0886697374053565 0.086688350152278 0.084965298219846 0.0847649728968443 0.0903623775071258 0.084636746079314 0.0865873477039627 0.0917603862922955 0.089223537259149 0.087853301269768 5 5|0 +|/ 2668430 2669623 2668890.2 2667413 2669918 + gene protein_coding_gene TRUE TRUE AT5G08300.1 succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative Identical to Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha-1) (SCS- alpha-1) [Arabidopsis Thaliana] (GB:P68209;GB:O82661;GB:P53586); similar to succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] (TAIR:AT5G23250.1); similar to succinyl-CoA ligase alpha 2 subunit [Lycopersicon esculentum] (GB:AAT67464.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain CoA-binding; (InterPro:IPR003781); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) 0.0739749016049367 0.831803351781618 0.423895005880753 1 0.385278159006161 19.9807831043391 0.0739749016049367 0.0653426068107013 AT5G57400_at 1.23265671078366 1.48149953452284 1.76760444875595 1.72815722896030 1.42527225261622 1.39769142428746 1.41733622099816 1.36652260427085 1.59347271195440 2.10912635091111 1.36208381226879 1.56749637689687 1.94999326937266 1.66603516331988 1.54016566079248 1.63177547554601 1.25984127214948 1.87646434523530 1.47875541925409 0.194724133097826 0.193765279344908 0.193765279344908 0.198473365922893 0.193765279344908 0.197356503917703 0.204743269999975 0.197461658602614 0.208628848185166 0.203897647826074 0.201984918181739 0.193765279344908 0.201269241823859 0.209913684912187 0.199570343206833 0.196637895198877 0.208611862602394 0.194474177994008 0.193765279344908 5 5 - 23280107 23280394 23280261.273 23280048 23280443 - gene protein_coding_gene TRUE TRUE AT5G57400.1 unknown protein -0.0697171557313515 -0.830229477048403 0.424745489610896 1 0.384034501104124 3.14401759447654 -0.0697171557313515 0.0447343995689633 AT5G40360_at 1.46323769458845 1.38787462837538 1.77761136573278 1.75235344312517 1.44349145544758 1.66928998663431 2.08475375375157 1.75059762784039 1.95059500777766 1.90580633183482 1.85782269973675 2.0169986410371 2.04852160408657 1.80189491360629 2.01595001950219 2.11844012937118 2.23553473773590 2.15583844855821 1.80596902961608 0.210821632511341 0.210757057018937 0.213522661782909 0.219622896854037 0.208779334637131 0.222094206110867 0.212078854904911 0.203175225216695 0.215491918088090 0.217496052147392 0.201128349922271 0.203624996398103 0.210872981108877 0.206119610151437 0.208384211262545 0.205884319934698 0.229207408698824 0.205594452945947 0.208395169744540 5 5 + 16163227 16163721 16163541.636 16162369 16163849 + gene protein_coding_gene TRUE TRUE AT5G40360.1 MYB115 (myb domain protein 115); DNA binding / transcription factor putative transcription factor (MYB115) similar to MYB118 (myb domain protein 118), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G27785.1); similar to MYB transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67643.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0752131319100525 -0.830189173702948 0.424767283568564 1 0.384002680720608 3.62556721391052 -0.0752131319100525 0.0711342763996034 AT5G28510_at 1.53990131698336 1.89010331410827 2.10183372577059 1.81823572946093 1.39944421565492 1.86247550467221 1.43317500604654 2.06236500830504 1.88099608807581 1.88868247759022 1.83828524537786 1.81972871514629 1.96756582795998 2.03184535579277 1.65891786200205 1.86570934068037 1.81031193060643 1.98230849489028 1.80657496163514 0.183172188903336 0.183352181304612 0.188830921988723 0.183172188903336 0.191864904285998 0.192227933460887 0.186954929698026 0.186881600472509 0.189447756712769 0.183172188903336 0.195038414464898 0.185889227565147 0.183434684062397 0.19023951140376 0.186653525054285 0.183172188903336 0.185313777226264 0.186257906974612 0.186141215838455 5 5|0 -|/ 10481067 10481952 10481642.222 10481045 10484026 - gene protein_coding_gene TRUE TRUE AT5G28510.1 glycosyl hydrolase family 1 protein similar to beta-glucosidase (PSR3.2) [Arabidopsis thaliana] (TAIR:AT1G66270.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G66280.1); similar to PYK10 (phosphate starvation-response 3.1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G09260.1); similar to beta-glucosidase [Brassica nigra] (GB:AAB38784.1); similar to beta-glucosidase [Brassica napus] (GB:CAA57913.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) -0.103325022532415 -0.829836873400177 0.424957821191853 1 0.383724588959559 3.62873436378726 -0.103325022532415 0.156070679620614 AT5G46630_at 10.1978048395135 10.2650921067327 10.7852809929934 10.7646412846034 11.0080307610829 10.6611042502662 10.0131152112984 9.891180500619 10.1234428731387 9.85680983089367 10.7329725531777 10.8128728734644 10.6634527640263 10.5169934733608 10.5234741371487 10.6896947143381 10.5163876318777 10.6447301060885 9.83065724386845 0.0897512801953865 0.0828088257717978 0.088221602312144 0.084594014134949 0.0828088257717978 0.0863010288654222 0.0828088257717978 0.0864403501023766 0.099865202829379 0.0898127619418175 0.0828088257717978 0.0831081066037239 0.0840695868481493 0.087651301008055 0.0926400200246562 0.08294048512573 0.0870340251427644 0.0837926950628728 0.0864910160405973 5 5 + 18939389 18940409 18939855.364 18937665 18940777 + gene protein_coding_gene TRUE TRUE AT5G46630.1|AT5G46630.2 clathrin adaptor complexes medium subunit family protein clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes similar to clathrin adaptor complexes medium subunit family protein [Arabidopsis thaliana] (TAIR:AT1G60780.1); similar to Os02g0690700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047793.1); similar to similar to Dictyostelium discoideum (Slime mold). Clathrin coat assembly protein AP50 (Clathrin coat associated protein AP50) (Plasma membrane adaptor AP-2 50 kDa protein) (HA2 50 kDa subunit) (Clathrin assembly protein complex 2 medium chain) (GB:AAO51241.1); contains InterPro domain Clathrin adaptor complex, medium chain; (InterPro:IPR001392); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Mu2 adaptin subunit (AP50) of AP2; (InterPro:IPR008968) 0.0736258115712733 0.829297694167817 0.425249541023877 1 0.383299181009376 20.7355523755481 0.0736258115712733 0.0647926579214929 AT5G47980_at 1.58366494548678 1.43421323429413 1.42966988492108 1.63464438172997 1.36889821531506 1.45816903252158 1.70309036878056 1.37611903017023 1.67576465007760 1.50642983688160 1.68247254347995 1.45253069084606 1.80030242956492 1.73107845038603 1.49904103431835 1.47088947913825 1.97416697879925 1.33057423564264 1.32371795932801 0.193651990468460 0.192001200887421 0.192067815216483 0.190208230926234 0.193292207641839 0.204587001141952 0.202167568556606 0.191552289118692 0.202590365423909 0.193478428277407 0.197316083777827 0.192106332825691 0.199181265350462 0.192545556049594 0.198498475677776 0.196778926705556 0.193401000714816 0.190208230926234 0.190489270450025 5 5 + 19446930 19447492 19447189.182 19446114 19447702 + gene protein_coding_gene TRUE TRUE AT5G47980.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT4G15400.1); similar to acyltransferase-like protein ACYL3a [Nicotiana tabacum] (GB:BAD93693.1); similar to acyltransferase-like protein ACYL3b [Nicotiana tabacum] (GB:BAD93694.1); similar to acyltransferase 1 [Capsicum chinense] (GB:AAN85435.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.0756235615889755 -0.828870910739397 0.42548054482325 1 0.382962622755277 3.05836003450292 -0.0756235615889755 0.0732636465899258 AT5G35830_at 1.65336734714375 1.48519196378631 1.83767870027307 1.91631720883366 1.22273321650966 1.79637337811693 1.51644532816121 1.39640532955826 1.36363715704772 1.97735539231223 1.63108235531628 2.18331082966861 1.49457455855816 1.35565353201297 1.99235484129786 1.72477891486917 1.97589108133416 1.43600037956962 1.16616661958524 0.222448275519296 0.214050495507516 0.222629937004828 0.219592781137587 0.225467655749345 0.219182667259077 0.216042838548921 0.224583070767730 0.219427713866305 0.224254554725392 0.228416559538221 0.213898307974463 0.212053724430411 0.21272819148775 0.220490905377639 0.213386522105393 0.22591795189241 0.229337209457529 0.216295594613432 5 5 - 14017557 14018194 14017925.818 14017543 14018646 - gene protein_coding_gene TRUE TRUE AT5G35830.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G54070.1); similar to PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] (GB:XP_001184381.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE87297.1); similar to PREDICTED: similar to ankyrin 2,3/unc44, partial [Strongylocentrotus purpuratus] (GB:XP_001198995.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.08517676315535 0.828331758889886 0.425772490032855 1 0.382537666829408 3.21636015966123 0.08517676315535 0.106388457885952 AT5G52890_at 3.71605615318238 4.02286181050994 5.67217310302468 5.54750573141609 4.61267926116989 4.88996559813635 3.63640367807561 4.13380563861709 4.17388938311674 3.38397839615116 3.99361957557146 4.19140633015788 3.63264827710135 3.48524506179316 4.21623149487847 4.51449353387369 4.00282641090415 3.71480872048651 4.03310021290887 0.253690619300549 0.246160429111929 0.245639295356370 0.260055300003961 0.245318852228595 0.26893231206968 0.256798230667388 0.248165832057779 0.245318852228595 0.254430509417702 0.256860962895401 0.246798725775164 0.253055637340344 0.264482683604437 0.245318852228595 0.252623988045178 0.250931659418483 0.255444924178011 0.245318852228595 5 5 - 21462286 21462817 21462537.375 21462061 21464466 - gene protein_coding_gene TRUE TRUE AT5G52890.1 AT hook motif-containing protein similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT4G21900.1) -0.0875334327883924 -0.826810909948125 0.426596736477719 1 0.381340239084734 8.44521433326055 -0.0875334327883924 0.114001930393057 AT5G37510_at 10.3072445950896 10.4688071535410 11.1122553270299 11.1419423291040 10.5402336600304 10.6944584937044 10.3687002653878 10.4602684387259 9.7518843641847 9.90209294812142 10.4438385193776 10.5818251039944 10.4322250013225 10.3635807894880 10.585669608414 10.4818059862417 10.5554526945769 10.3530256490658 9.8106343365583 0.0819801779391308 0.0813881167276746 0.0830034820940113 0.0824773573233627 0.0819068914915846 0.0841142176201524 0.0819775626122104 0.0832726616036487 0.0848649427306937 0.0849461513966968 0.0811983714580651 0.0826311040044881 0.0811983714580651 0.0829049780243907 0.0825059154998288 0.0842884201107192 0.0877246456170195 0.0837736903477553 0.0836779760014823 5 5|0 +|/ 14917034 14917542 14917271.3 14914640 14917887 + gene protein_coding_gene TRUE TRUE AT5G37510.1|AT5G37510.2 EMB1467 (EMBRYO DEFECTIVE 1467); NADH dehydrogenase Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. Identical to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (75 kDa mitochondrial complex I subunit) [Arabidopsis Thaliana] (GB:Q9FGI6;GB:Q940B1); similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) (GB:Q43644); similar to NADH:ubiquinone oxidoreductase 78 kDa subunit [Chlamydomonas reinhardtii] (GB:AAQ73136.1); similar to unnamed protein product [Macaca fascicularis] (GB:BAE01362.1); contains InterPro domain NADH-quinone oxidoreductase, chain G; (InterPro:IPR010228); contains InterPro domain Molybdopterin oxidoreductase; (InterPro:IPR006656); contains InterPro domain 2Fe-2S Ferredoxin-like fold; (InterPro:IPR012675); contains InterPro domain Respiratory-chain NADH dehydrogenase 75 kDa subunit; (InterPro:IPR000283); contains InterPro domain Ferredoxin; (InterPro:IPR001041) -0.0689749080041528 -0.826493597196758 0.426768843240334 1 0.381090646787625 20.7848463505007 -0.0689749080041528 0.0420895867735407 AT5G15300_at 2.03419550175552 1.30728777545341 2.08584721294510 1.91588033271836 2.06208989430435 1.77746819744910 1.62998689325761 1.40182125427575 2.06226345732752 1.70247484861674 1.81385852432419 1.51620244528039 1.61735846251973 2.04558331932823 1.64160287483612 1.29497690729031 1.84811748317957 1.97327319839885 2.22689972338195 0.203036646831721 0.205722612817123 0.203012336634995 0.204657265716182 0.206092121261718 0.201346916901858 0.208846238702336 0.203408542867715 0.211390018738710 0.206483007711569 0.205831735009352 0.203753907825591 0.214497748293540 0.201619863740595 0.202314884164066 0.203463335044610 0.212909089493647 0.210272232347839 0.203721129999313 5 5 - 4968415 4968950 4968668.545 4968166 4970037 - gene protein_coding_gene TRUE TRUE AT5G15300.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G29230.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE79452.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0980083012847446 -0.825061095249726 0.427546393383249 1 0.37996490480645 3.63486429693827 -0.0980083012847446 0.143786729897578 AT5G53240_at 1.15108728616719 1.7080567197229 1.39599723751016 1.34220123952055 1.15658889226442 1.58662706631333 1.41886799920338 1.40751834447398 1.74217494924656 0.960832609223722 1.48535765807630 1.64949382080408 1.52607348396717 1.23278157896954 0.933440327486633 1.13407495083066 1.09853968439509 1.45410193148848 1.08847621357623 0.218664952061147 0.216018922754555 0.232874409527559 0.218948245529066 0.224122135194599 0.228980076926112 0.222583725120788 0.218969926587630 0.222589221958856 0.221941097791927 0.216508676170086 0.214837070643512 0.219349800445121 0.218300814647170 0.216358698486133 0.218344312662173 0.229623737380219 0.246873406542799 0.222630909832042 5 5 + 21619294 21619807 21619576.273 21618707 21619962 + gene protein_coding_gene TRUE TRUE AT5G53240.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55270.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) -0.090075621679765 -0.824508076491837 0.427846820374876 1 0.379530765620489 2.68489852490586 -0.090075621679765 0.122144061533186 AT5G57420_at 1.17849721036465 0.883121750374659 1.45173167919392 1.05794328960687 1.25391934504526 1.17674395561049 1.6364120792685 1.27159478941939 1.61481633414756 1.19459392264033 1.47215608909271 1.36025073709388 1.16039711467320 0.909465209962103 1.53708128136452 1.07316645330229 1.33870144255239 1.6105543283239 1.09718938980050 0.186264794570456 0.191474926834808 0.184054634163889 0.192319706320312 0.183006881361181 0.189352364552883 0.188954574007093 0.189093770196776 0.181191557768711 0.192530789250288 0.181191557768711 0.186825132541586 0.205608606203632 0.199675515983405 0.188940043137023 0.184754819810713 0.184904438578411 0.191197074952295 0.193197443852178 5 5 + 23287297 23288128 23287586.727 23287250 23288216 + gene protein_coding_gene TRUE TRUE AT5G57420.1 IAA33 (indoleacetic acid-induced protein 33); transcription factor Belongs to auxin inducible gene family. Identical to Putative auxin-responsive protein IAA33 (Putative indoleacetic acid- induced protein 33) (IAA33) [Arabidopsis Thaliana] (GB:Q9FKM7); similar to IAA12 (AUXIN-INDUCED PROTEIN 12), transcription factor [Arabidopsis thaliana] (TAIR:AT1G04550.2); similar to Aux/IAA_ARF_dimerisation [Medicago truncatula] (GB:ABE82174.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525) -0.0848627524246726 -0.823769396351204 0.428248327575441 1 0.378951270919502 2.54370624448134 -0.0848627524246726 0.106869298327672 AT5G28930_at 1.01622101038377 0.995979497918205 1.46063864028382 1.43500615794582 1.11237762357640 1.06317623228875 1.39328753126522 1.04799592814112 1.13514251422649 1.12709267650875 0.663833535202383 0.881743656381758 1.20770764125084 0.886864958150172 0.580342008070379 1.26971812074489 0.864686655797289 1.50337158623056 1.13882276603096 0.206295823040027 0.202296652895926 0.202742874621263 0.197837862118196 0.203429211937889 0.208135281440973 0.199642442385487 0.198412584622969 0.211333698354294 0.199785788388282 0.204828760453571 0.196839158770817 0.201850436565855 0.196468384420944 0.205499877498747 0.199744568419839 0.201672974332345 0.198002021082531 0.201345848324081 5 5|0 +|/ 10970576 10972453 10971959.667 10968251 10972491 + gene protein_coding_gene TRUE TRUE AT5G28930.1 cysteine-type peptidase similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G07240.1); similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD64941.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) -0.0719624870092875 -0.820925392308434 0.429796523392339 1 0.376724372433237 2.24857008063402 -0.0719624870092875 0.0606219678646608 AT5G46570_at 4.62153855330509 5.11550334611662 4.30534784791851 4.86388859503896 6.02202842426463 4.81118209237474 6.02074151146012 6.1392983860467 5.09005670588845 5.11905488792652 7.4465752743995 8.14557130482025 7.10241169946232 7.31818096058595 7.6516136851414 6.45750541232578 5.77574468494254 7.07749794378207 4.59768307658280 0.208338587129641 0.207188744602232 0.211633326610745 0.208583136404206 0.205579970789947 0.226038179569007 0.207062332260319 0.208591272879639 0.212632147574090 0.203743686628610 0.209050187348856 0.209009040215151 0.202896367010763 0.218262188356193 0.207486223897283 0.20253221751458 0.223682929347523 0.201559454205426 0.201559454205426 5 5 + 18913683 18914370 18914054.818 18911629 18914633 + gene protein_coding_gene TRUE TRUE AT5G46570.1 protein kinase family protein similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to Os10g0571300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065455.1); similar to Protein kinase domain, putative [Medicago truncatula] (GB:ABE88013.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.140129666662677 -0.817981606928348 0.431402959386164 1 0.374426413162307 11.2661840166399 -0.140129666662677 0.246939579522706 AT5G11770_at 10.9064146500637 11.1360228673560 11.8326413726383 11.7940489667885 11.6409642401632 11.5611274478747 11.2899901482256 11.4775575786160 10.9516384559291 10.8943770963943 11.5613817469537 11.4354719257035 11.6697481521007 11.6372211722660 11.5701220939384 11.6170239308084 11.5327040893748 11.7177208371893 10.7103924793083 0.0597474255519224 0.0597489349296716 0.0608761237319599 0.0624615282467568 0.0602016876023346 0.062033670875866 0.0603504407409481 0.0608752981534244 0.0618353437503852 0.0598126964944235 0.0588319757093825 0.0588319757093825 0.0588319757093825 0.0617118374356273 0.0604947811592934 0.0599708110888539 0.0697192124716427 0.0588319757093825 0.0593353293574103 5 5|0 -|/ 3791208 3792719 3792215.6 3790807 3793001 - gene protein_coding_gene TRUE TRUE AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial Identical to NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) [Arabidopsis Thaliana] (GB:Q42577); similar to NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (Complex I-20kD) (CI-20kD) (GB:P42027); contains InterPro domain NADH ubiquinone oxidoreductase, 20 kDa subunit; (InterPro:IPR006137); contains InterPro domain NADH dehydrogenase (ubiquinone), 20 kDa subunit; (InterPro:IPR006138) 0.070151082125345 0.816637927820664 0.432137536102903 1 0.373379912009036 22.6772510360086 0.070151082125345 0.0535532921444413 AT5G17720_at 1.40260948775207 1.51137406215921 1.99589934429629 2.36258508390383 1.29416187630857 1.64489074512587 1.43868229436062 1.69862562088547 1.94495379830616 1.49790129274909 1.21046970438148 1.50489930810561 1.45920948763544 1.51784078817534 1.44968462469901 1.50378566024716 1.74999954237731 1.71114627809588 1.80073787236482 0.221123690069982 0.224371852184313 0.226593347139389 0.225982270147229 0.221568643688431 0.227453751531313 0.218589927849763 0.223650941535478 0.225012405291879 0.231738358776463 0.224891295360657 0.218529719244712 0.222725643756515 0.218529719244712 0.222554967475571 0.220269940640617 0.220515978839712 0.232127195880183 0.224296498515813 5 5 + 5846761 5847542 5847075.182 5845936 5847655 + gene protein_coding_gene TRUE TRUE AT5G17720.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G17780.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO33147.1); similar to Os07g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060676.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.0820176147578604 -0.815747075659009 0.432625014384717 1 0.372686914911711 3.29922543702633 -0.0820176147578604 0.100441713535580 AT5G22555_at 1.26059810204890 1.88980583375718 2.06640214521591 2.25588103532972 1.49487183832286 1.60637811622903 1.66690129094447 1.96892117825247 2.22324739526829 1.97342022919155 1.83068764106870 1.56961691669955 2.35300797629914 1.81669426570051 2.18574385628558 1.90031559557011 2.17852794095758 1.94556077437579 1.83416827113783 0.222716593997038 0.221987728049671 0.225540591066793 0.228894611193124 0.227827910333620 0.224480803058231 0.221987728049671 0.224340240370179 0.229350349534800 0.224948112182147 0.230880996250955 0.224507915023557 0.222695735292674 0.224134042330545 0.227335402613493 0.226748488037508 0.227511139733724 0.223713039325011 0.222288015124268 5 5|0 +|/ 7489453 7490256 7489876.9 7489425 7490506 + gene protein_coding_gene TRUE TRUE AT5G22555.1 unknown protein -0.0906291511046704 -0.815282972864259 0.432879118091684 1 0.372326149248672 3.76761894388032 -0.0906291511046704 0.126632303183765 AT5G40600_at 3.06780526461568 2.96314761006297 3.41900465769325 3.61754558168222 4.18521073765169 3.31418444216439 3.01822828372952 3.66426103100137 2.89751321940649 2.74976554081427 3.86780801490327 3.82525454710409 3.9142225750522 3.35165752764547 3.71380271825372 3.71464945934265 3.46256037885501 2.88702658427269 2.64617412251694 0.210837616915295 0.211511090883686 0.213038327339955 0.211134415847562 0.217116904568626 0.228924616233223 0.213588906376356 0.211936075046309 0.227614444593819 0.212078750826683 0.211165276012504 0.214324326879619 0.212378966883721 0.214265977065447 0.213759289057914 0.212300661622294 0.224557791050878 0.216282449243918 0.21868341012656 5 5 - 16272306 16273199 16272789.091 16272272 16273993 - gene protein_coding_gene TRUE TRUE AT5G40600.1 EMB1875 (EMBRYO DEFECTIVE 1875) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27420.1) 0.115759148469095 0.81488331926552 0.43309801419169 1 0.372015626153673 6.5844769610374 0.115759148469095 0.191647148052985 AT5G11030_at 5.42560033611839 5.503795750748 6.76111308522423 6.91863130137723 6.80777089073723 6.57029671035027 5.28624765330292 4.78577842849206 4.58049068390002 4.27319227198641 5.23958505674687 5.18966244743537 4.88665668066978 5.30533586411497 4.71393572535052 5.48481660554815 5.15731583783208 4.89549448425508 4.67744018365374 0.265741876387789 0.267543592950707 0.280266805630321 0.264783477508831 0.275732772149295 0.286859421786324 0.266101567511909 0.272216962690071 0.267736643606915 0.27140495181971 0.264783477508831 0.264783477508831 0.265681928143074 0.279435683027506 0.264783477508831 0.265807589163437 0.274878692687027 0.273490305293041 0.266200767110573 5 5|0 -|/ 3491060 3492262 3491584.556 3490834 3495133 - gene protein_coding_gene TRUE TRUE AT5G11030.1 ALF4 (ABERRANT LATERAL ROOT FORMATION 4) alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus. Identical to Aberrant root formation protein 4 (ALF4) [Arabidopsis Thaliana] (GB:Q84VX3;GB:Q9FY62); similar to Aberrant root formation protein 4 (GB:Q84VX3) 0.0817642385396458 0.812808130010654 0.43423580597338 1 0.370405382246509 10.8171416283392 0.0817642385396458 0.100578849926277 AT5G09220_at 11.1697145351922 11.1712521564682 12.3629876249964 12.3480379551520 12.0994639679859 12.1318861508713 11.4888137627066 11.7323072666635 10.3570700324843 11.3216540197753 11.418858746676 10.2245588114134 11.9629773893031 11.4554027273730 10.0497053178572 11.5442720106254 11.8910870512536 11.3893865265658 10.9059032070677 0.0647003906639562 0.0638411683810858 0.0656692725916334 0.0638683116155348 0.066085081922369 0.0660861161101177 0.0627795955929684 0.0633192891281558 0.0669589939846153 0.0630725334352843 0.0617150236562727 0.061832031400835 0.0634257422869677 0.0660392119161893 0.0640435959728433 0.0617150236562727 0.0683112774855504 0.06336471906129 0.0647317496819312 5 5 + 2868274 2868807 2868513.455 2866253 2869055 + gene protein_coding_gene TRUE TRUE AT5G09220.1 AAP2 (AMINO ACID PERMEASE 2); amino acid permease member of AAAP family similar to AAP4 (amino acid permease 4), amino acid permease [Arabidopsis thaliana] (TAIR:AT5G63850.1); similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to AAP5 (amino acid permease 5), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G44100.1); similar to amino acid transporter [Lycopersicon esculentum] (GB:AAO13689.1); similar to amino acid permease [Brassica napus] (GB:CAF22024.1); similar to amino acid carrier [Ricinus communis] (GB:CAA07563.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) 0.0677401200581602 0.81076756055786 0.43535654585483 1 0.368825500266429 22.8648446737091 0.0677401200581602 0.0425890802092622 AT5G27580_at 1.11711306263885 1.20290846303168 1.21533049985780 1.21665534354490 0.87689869125315 1.22439713981985 0.501382503391305 1.83845830383961 1.59490844673213 1.28940419096475 1.12180931586484 1.14345649425057 1.14135551371545 1.33571819238038 1.55029274827652 1.45881132405530 1.80723353672097 1.32740231963999 1.41181045397032 0.208538460149018 0.208035549123114 0.205588430525638 0.209246810563995 0.205778478426215 0.211826263096993 0.210409001264477 0.209756453411270 0.209820311206618 0.204066465602378 0.213146791838621 0.208569427961406 0.20933418939339 0.203845433584399 0.204672946015271 0.204748944057143 0.209047703299208 0.205799159648258 0.203845433584399 5 5 + 9737085 9737280 9737204.8 9736654 9737325 + gene protein_coding_gene TRUE TRUE AT5G27580.1 MADS-box family protein similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT5G27070.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAS07192.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.135497526947818 -0.809957538884704 0.435801963519596 1 0.368199315150943 2.54554348150651 -0.135497526947818 0.239534753856528 AT5G66190_at 11.8954489277684 12.0602102759182 12.5318271686520 12.4527532815729 12.5286349094042 12.3629604788534 12.6268939453403 12.4728645564811 12.4436169365898 12.8307480574821 13.3245273100931 13.3054815117514 13.1484442782772 13.0631819093594 13.3263585422580 13.2994423924538 13.0692789959639 13.2412995764725 12.6905470475922 0.0592035625415037 0.0569404588298338 0.0559046113523852 0.0567496790768734 0.0566161108570503 0.0594028477757793 0.0572175039855975 0.0591284156761276 0.0708349445746091 0.0599306821519813 0.0590845848644372 0.056261472358501 0.0579339770195792 0.061573734766973 0.0598743206512169 0.0559046113523852 0.0599677271465025 0.0629416346571119 0.058669718841191 5 5|0 -|/ 26468756 26469420 26469052.625 26468190 26470425 - gene protein_coding_gene TRUE TRUE AT5G66190.1|AT5G66190.2 ATLFNR1 (LEAF FNR 1); NADPH dehydrogenase/ oxidoreductase|ATLFNR1 (LEAF FNR 1) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. similar to ATLFNR2 (LEAF FNR 2), NADPH dehydrogenase/ oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G20020.1); similar to Ferredoxin--NADP reductase, chloroplast precursor (FNR) (GB:P41346); contains InterPro domain Ferredoxin--NADP reductase; (InterPro:IPR012146); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709)|similar to ATLFNR2 (LEAF FNR 2) [Arabidopsis thaliana] (TAIR:AT1G20020.3); similar to Ferredoxin--NADP reductase, leaf isozyme, chloroplast precursor (FNR) (GB:P10933); similar to Chain A, Wild-Type Pea Fnr (GB:1QG0); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) -0.0688633144206121 -0.80861989915136 0.436538169245836 1 0.367166454833818 25.3050604405655 -0.0688633144206121 0.0503265013353199 AT5G66220_at 1.17004899955600 1.48503232153700 1.02239894149826 1.58052511322906 1.22055608543030 1.46481672593401 1.61123500856134 1.22612949753164 1.30606974031182 1.27071125629621 1.23418593231768 1.08437229443055 1.09694969690527 0.801458726537472 1.06129630649792 1.39912352479109 1.47991953625251 1.88048391517098 1.08015051563645 0.207770126192947 0.199966800005722 0.200475852650488 0.214106813375312 0.206834724343562 0.207310845219597 0.203528463986566 0.200751802717874 0.212374119446619 0.220250584027628 0.202282038511517 0.202047387889726 0.207084362558942 0.210642757955860 0.199966800005722 0.201882616282411 0.208698337099837 0.205451090103702 0.209734923701947 5 5|0 +|/ 26478607 26479313 26478862.375 26478403 26479400 + gene protein_coding_gene TRUE TRUE AT5G66220.1 chalcone isomerase similar to TT5 (TRANSPARENT TESTA 5), chalcone isomerase [Arabidopsis thaliana] (TAIR:AT3G55120.1); similar to Chalcone--flavonone isomerase (Chalcone isomerase) (GB:O22651); contains InterPro domain Chalcone-flavanone isomerase; (InterPro:IPR003466) -0.0932207907331996 -0.80834149425939 0.436691500075987 1 0.366951671903625 2.58444329284025 -0.0932207907331996 0.136119218253694 AT5G17330_at 3.29561731309578 3.24779911579202 3.97656148605213 3.90138208545463 2.15552311550163 3.05355005203526 2.41490893645724 2.93037147598658 2.23959474658993 2.31039108948578 2.42265647539049 2.30578077600899 2.03112938105187 2.57584205545994 1.98593051485694 2.3622368184 2.5098009909273 2.47942623577832 2.01835832234332 0.226349451687671 0.229195050128073 0.225268119394937 0.226374874082530 0.223962195945190 0.223860833208445 0.231676984435315 0.223028046442098 0.222103111935286 0.237761511220918 0.225951091595756 0.218986313678647 0.22273761017519 0.226661626495656 0.22386255709959 0.221555495673639 0.226356445516984 0.22675919633785 0.230519191050618 5 5 + 5714090 5714668 5714426.364 5711014 5715077 + gene protein_coding_gene TRUE TRUE AT5G17330.1 GAD (Glutamate decarboxylase 1); calmodulin binding Encodes one of two isoforms of glutamate decarboxylase. Identical to Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1) (GAD1) [Arabidopsis Thaliana] (GB:Q42521;GB:Q9FFH9); similar to glutamate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT3G17760.1); similar to glutamate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT2G02010.1); similar to glutamate decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT2G02000.1); similar to Glutamate decarboxylase (GAD) (GB:Q07346); similar to glutamate decarboxylase [Populus tremula x Populus alba] (GB:ABA18652.1); similar to glutamate decarboxylase (GB:AAA93132.1); contains InterPro domain Glutamate decarboxylase; (InterPro:IPR010107); contains InterPro domain Pyridoxal-dependent decarboxylase; (InterPro:IPR002129) -0.109996975967155 -0.80820464948438 0.436766880050264 1 0.366846123050869 5.38373842694219 -0.109996975967155 0.179851386151629 AT5G18040_at 5.65756880487547 5.4876220394883 6.91222802427206 6.99542941464112 7.38058765175788 6.81142400908062 6.392666241449 5.51614990987336 5.32372330393207 5.58880142678589 6.14536956447459 6.08059877610469 6.37253905689398 6.58279842868372 6.37674881208535 6.73816468975193 7.14395316115671 6.43790643235667 5.41447577292485 0.207366555225540 0.207090789888720 0.197092654656872 0.208146553591986 0.219119994292752 0.229719873446060 0.199517126441667 0.206437329864168 0.21414135728305 0.208940925891375 0.200173587294417 0.195365270145561 0.198695131774201 0.201179171582827 0.195365270145561 0.199935278583359 0.195365270145561 0.200480183940634 0.205006886931054 5 5 + 5973291 5973898 5973693.375 5972421 5974158 + gene protein_coding_gene TRUE TRUE AT5G18040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18065.1); contains domain Cysteine proteinases (SSF54001) 0.111539064016726 0.807786078781163 0.436997500103811 1 0.366523375077529 12.3577561951311 0.111539064016726 0.183799411015530 AT5G47690_at 8.31114626654464 8.4553698199414 8.65205047235314 8.96228876189461 9.16189967317797 8.99216397534444 8.1929993755292 8.03029281701214 8.29173618579649 8.11788056578182 9.09364250691506 9.2963548549771 8.9110349135578 9.21768298080427 9.05999558467765 9.39650775022919 9.10428667496346 8.9931841439863 8.59733564219532 0.188894688678819 0.184370544349885 0.191085261485545 0.190604467277236 0.172226747755241 0.190978172469755 0.196976725522100 0.191361534425055 0.219431773398945 0.175911258634490 0.173942261744206 0.172226747755241 0.174743097962860 0.172226747755241 0.183517406593735 0.172251678105758 0.177469095793001 0.172226747755241 0.182317144400037 5 5|0 +|/ 19343405 19344070 19343803.2 19334951 19344556 + gene protein_coding_gene TRUE TRUE AT5G47690.1 binding similar to binding [Arabidopsis thaliana] (TAIR:AT1G77600.1); similar to putative Spo76 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD69240.1); similar to hypothetical protein MtrDRAFT_AC149032g9v1 [Medicago truncatula] (GB:ABD28591.1); similar to hypothetical protein 26.t00005 [Brassica oleracea] (GB:ABD64989.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.0732145743466892 -0.806258269798167 0.437839959846685 1 0.365346567069243 17.3296448823189 -0.0732145743466892 0.0718399624923837 AT5G17640_at 5.87752924016672 6.28452049778534 7.11504128150614 7.11170154676744 7.5039081309378 7.6557607101087 5.6557478039899 5.5583466836205 6.44137791398408 5.77729328288163 7.5436487039298 6.44519663871945 7.22620401603055 7.09545984305223 6.56680814004854 6.61103866461766 6.82662243971363 6.70065004802835 6.1982444931718 0.166946604126261 0.165004969526837 0.165205362338684 0.161642743184467 0.16395845911479 0.162065831628126 0.175101063516594 0.164726003973100 0.166005804285761 0.161231628977761 0.164017503879005 0.168570333940410 0.160353766925542 0.16358366298999 0.165885363118937 0.163623026117958 0.164087127047138 0.167623661727502 0.163242640828869 5 5 - 5811053 5811622 5811356.636 5810937 5813286 - gene protein_coding_gene TRUE TRUE AT5G17640.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10020.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19269.1); contains InterPro domain Protein of unknown function DUF1005; (InterPro:IPR010410) 0.0741982733816362 0.802956936104638 0.439664027232692 1 0.362810351121433 13.1032822160837 0.0741982733816362 0.0770431942066083 AT5G22270_at 10.8036653920174 10.9870506796843 11.7902930985835 11.8218752546877 11.7755267642052 11.6886070771575 11.0609941076420 11.0993757801042 11.7587201748262 11.9155302001248 12.4321760185836 12.2901426148941 12.3035062243658 12.2033992467575 12.0830933325677 12.1261417605283 12.5322631767136 12.4774400700256 12.0671334087629 0.0577569914569732 0.0559835226450961 0.0581525378762138 0.0553952599488653 0.0556699075697089 0.0562650993429397 0.0544829027659186 0.0562423756009155 0.06230263998935 0.0554111412747448 0.0551506967734312 0.054421240529635 0.0549050613063385 0.0568288368112263 0.0580665677912699 0.0547534483617439 0.0559363223828947 0.054421240529635 0.0558807527969796 5 5 - 7372521 7372738 7372623.818 7372236 7373105 - gene protein_coding_gene TRUE TRUE AT5G22270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11600.1); similar to H0913C04.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86164.1); similar to Os04g0415000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052757.1); similar to Os02g0536500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047044.1) 0.0659079886731475 0.799884146888136 0.441366306715614 1 0.360457910591620 23.4883309693231 0.0659079886731475 0.0361579824413826 AT5G57500_at 2.56504875163433 2.89252254824415 2.58619246539035 2.78063857985377 1.88287463450552 2.41387582721604 1.88636553612468 2.45714360886403 3.08237620956382 2.69569366092664 2.98893724811158 3.10053075776924 3.26136070463854 3.1534616698514 3.8219231855076 3.08164145811663 2.77897193162226 3.35503886447775 2.29522864320259 0.188793034214687 0.192169311326856 0.195755491846078 0.190921485676559 0.195367265154855 0.188266216028349 0.196636369072398 0.193031899358842 0.196198180382354 0.189900474361866 0.18797918276304 0.192002195876130 0.193264251567783 0.202278198949727 0.194736040370143 0.193296143006287 0.193643597125750 0.196430914371002 0.197972641900322 5 5 - 23303637 23304127 23303863.909 23303463 23304797 - gene protein_coding_gene TRUE TRUE AT5G57500.1 transferase, transferring glycosyl groups similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G06440.1); similar to Os02g0785000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048329.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19304.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) -0.0971368400890433 -0.797979066865304 0.442423864249708 1 0.359003410009562 5.37499911001722 -0.0971368400890433 0.150149057186153 AT5G60080_at 2.25474997058639 2.74299622436881 3.07979827121128 2.94286587123689 2.00174309692975 2.35025109443294 2.34560261107212 2.30464802474000 2.24236182972593 1.96000595017849 1.88412183794202 2.18618076924502 2.29991137666357 2.29548597592719 2.48987152986819 2.13634513767789 2.57218265309606 2.25700211936687 2.18204344345818 0.185690869218298 0.182296926605771 0.183325986795260 0.181878402262314 0.183793219266617 0.188216188802394 0.183695776215443 0.181174172465417 0.190920701508544 0.178512483341601 0.183901958252478 0.174533170019565 0.177125768639395 0.175669210614457 0.176784399015942 0.177669171520184 0.181448539869181 0.179512212389534 0.186846418751323 5 5 - 24210430 24211062 24210746 24210407 24212135 - gene protein_coding_gene TRUE TRUE AT5G60080.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60090.1); similar to Os05g0207700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054902.1); similar to Protein kinase [Medicago truncatula] (GB:ABE81726.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.082078179273764 -0.797204519732754 0.442854309730217 1 0.358412925395864 4.69946927028605 -0.082078179273764 0.106715949793024 AT5G58220_at 8.54973727300571 8.40853220331303 8.95300914676416 8.92774186959678 8.88984260528408 8.75024043026806 7.64548635979898 7.24392794645156 7.74931225970789 7.033701058409 8.23257088388036 8.23739956309815 7.77681629519188 8.05933367842967 8.20849719825135 7.77047991271875 8.23061042699162 8.25029762917869 7.26850411055358 0.148127684738842 0.145344609660245 0.146946340743496 0.148095093397252 0.147388921031353 0.145344609660245 0.148412340248666 0.153127316204775 0.155776133599221 0.160294745607684 0.149811550407652 0.151859244922253 0.158135984608563 0.148596699112752 0.148761604808821 0.151427047995463 0.149042130401379 0.157917607337692 0.158289079134473 5 5 - 23571775 23572439 23572037.727 23571612 23573109 - gene protein_coding_gene TRUE TRUE AT5G58220.1|AT5G58220.2|AT5G58220.3 steroid binding Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to Transthyretin precursor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96361.1); similar to Os03g0390700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050277.1); contains InterPro domain Transthyretin; (InterPro:IPR000895)|Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to Transthyretin precursor family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96361.1); contains InterPro domain Transthyretin; (InterPro:IPR000895)|Identical to Transthyretin-like protein (TTL) [Arabidopsis Thaliana] (GB:Q9LVM5); similar to putative transthyretin, having alternative splicing products [Oryza sativa (japonica cultivar-group)] (GB:AAR06356.1); contains InterPro domain Transthyretin; (InterPro:IPR000895) -0.073775422859778 -0.796736803421693 0.443114370518739 1 0.358056600549736 16.1441929833225 -0.073775422859778 0.0776464541343218 AT5G48000_at 0.798452422475081 0.4753988721463 0.800116167331023 0.432764631975608 0.954457674336783 0.728039046091821 0.787378516125224 0.868483821465173 0.605114802168919 1.10570840121448 0.99112000365119 0.648714046229766 1.06531163945323 0.973322739283717 0.784773803873255 0.736039625674852 0.606057514557911 1.04593522127371 0.978436732266168 0.217168264096978 0.217661814814084 0.216460327978118 0.223978701463101 0.214140738708738 0.21530138448934 0.213957149531208 0.21795380156941 0.222367003061108 0.224013745798385 0.213282634299477 0.218011793559236 0.231564591141296 0.215934011325879 0.213282634299477 0.213282634299477 0.224056193633780 0.218927399658296 0.220540522537809 5 5|0 -|/ 19461543 19463073 19462194.1 19461364 19465076 - gene protein_coding_gene TRUE TRUE AT5G48000.1|AT5G48000.2|AT5G48000.3|AT5G48000.4|AT5G48000.5 CYP708A2 (cytochrome P450, family 708, subfamily A, polypeptide 2); oxygen binding|CYP708A2 (cytochrome P450, family 708, subfamily A, polypeptide 2) member of CYP708A similar to CYP708A3 (cytochrome P450, family 708, subfamily A, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G78490.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE90564.1); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain E-class P450, group IV; (InterPro:IPR002403) -0.0782890679950787 -0.796580188438613 0.443201474340407 1 0.357937326092084 1.60705104539316 -0.0782890679950787 0.0943353040936872 AT5G42970_at 6.14361988615623 6.1587580515011 7.58047077317362 7.5973880244974 7.68574063904759 7.09736993283864 6.81592764042154 6.37894990590802 5.26781232860103 5.35282986535097 6.37991895715595 6.76482271181187 6.34661283319578 5.96922296163935 6.55877251560656 6.56158384880301 6.45514296596051 6.34415066455432 5.18814393024743 0.226790887762346 0.217888436391399 0.222572811374265 0.224086915833526 0.229716698484494 0.233824535233841 0.225343999450327 0.223059537958315 0.229808104369054 0.219201910857247 0.225768006787932 0.218155469093780 0.232750005761458 0.230102453791651 0.220089671548678 0.217562017359754 0.235493851147257 0.216484565022866 0.218172422040502 5 5 - 17254698 17255914 17255441 17254393 17257961 - gene protein_coding_gene TRUE TRUE AT5G42970.1 COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8) encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. Identical to COP9 signalosome complex subunit 4 (Signalosome subunit 4) (Constitutive photomorphogenesis protein 8) (FUSCA protein 4) (FUSCA4) (AtS4) (CSN4) [Arabidopsis Thaliana] (GB:Q8L5U0;GB:Q9FMM1;GB:Q9SW74); similar to 26S proteasome regulatory subunit, putative (RPN5) [Arabidopsis thaliana] (TAIR:AT5G64760.2); similar to Os03g0197400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049272.1); similar to COP8-like protein [Lilium lon (GB:AAQ07984.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.088588879777606 0.79613051300252 0.443451630584448 1 0.357594977849102 12.7783400102301 0.088588879777606 0.126891084130527 AT5G40430_at 1.95599836296312 1.99887357995738 2.20813183904599 2.64781794086408 2.13853565745953 2.23844803014812 2.0039664750692 1.91172117606740 2.08271419312396 2.53668731901314 2.26088607695194 1.96756799086165 1.86709698555587 2.15792283952004 1.98511909397848 2.21736188370415 2.17369639662767 2.70923638185596 2.14054349815524 0.187950276627743 0.188883429641021 0.188551639167225 0.197802958052753 0.185185314241737 0.1926510649466 0.187534800817865 0.187026090575181 0.194310528785656 0.188440387303914 0.186278748224016 0.186906678784689 0.195157456585425 0.189597591736873 0.189430006410291 0.187037900129183 0.185022204879422 0.190866151589623 0.192547600790253 5 5 - 16193690 16194591 16193984.545 16193655 16194959 - gene protein_coding_gene TRUE TRUE AT5G40430.1 MYB22 (myb domain protein 22); DNA binding / transcription factor Encodes a putative transcription factor (MYB22). similar to MYB100 (myb domain protein 100), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G25230.1); similar to myb family transcription factor, putative [Oryza sativa (japonica cultivar-group)] (GB:ABA96594.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0742550780705148 -0.795463120244207 0.443823074356853 1 0.357087189520978 4.34827461247823 -0.0742550780705148 0.0799905437500006 AT5G33370_at 0.781602597420373 1.22297286622803 1.13886197798907 1.45230468978535 1.58739825127649 1.08479929877597 1.24831967437238 0.680943320464221 0.927207646438372 1.39176318950104 1.09193390679949 0.830866671779119 1.48677377649703 1.40771437222772 1.26946537212067 1.24008320730792 1.38217256774105 1.69894324580795 1.49633646357871 0.224074211486646 0.229327930211937 0.227257839808335 0.233467925302671 0.227482983724719 0.230510172516418 0.225810252448871 0.224074211486646 0.234281448696959 0.231563003921709 0.229193868440194 0.230594427307539 0.235529974456049 0.224771078107169 0.226286590071208 0.226474119222462 0.227429722092589 0.237255344272766 0.228350041492827 5 5 - 12620027 12621188 12620570.455 12619698 12621994 - gene protein_coding_gene TRUE TRUE AT5G33370.1|AT5G33370.2 GDSL-motif lipase/hydrolase family protein similar to ATLTL1/LTL1 (LI-TOLERANT LIPASE 1), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT3G04290.1); similar to GSDL-motif lipase [Agave americana] (GB:AAS75127.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.100891162307711 0.794706906536713 0.444244198447673 1 0.356512273715408 2.43603195447623 0.100891162307711 0.161189590918277 AT5G20990_at 8.3383669960514 8.29415082610647 9.31088081731649 9.10556757995474 9.01334089211714 8.867021723015 8.12556521000155 7.83533168940163 7.94577875302706 7.79598946474372 8.53190404131188 8.8780112031315 8.38666586131767 8.48216989276166 8.4985756077568 8.55080726713687 8.62063986313398 8.28029878733515 7.92819587846938 0.127490992580051 0.125757188164727 0.132522019174508 0.125850329590211 0.127413884251309 0.129056153517595 0.136677716735174 0.129263460785845 0.133788344197463 0.134598951626143 0.124924683219673 0.126790196676582 0.128035668982532 0.127409565934629 0.129421639608498 0.124525523235767 0.124151757218786 0.133051407130627 0.133234521402461 5 5|0 -|/ 7128740 7130546 7129380.143 7128477 7133478 - gene protein_coding_gene TRUE TRUE AT5G20990.1 B73 (CHLORATE RESISTANT 6); molybdenum ion binding Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling. Identical to Molybdopterin biosynthesis protein CNX1 (Molybdenum cofactor biosynthesis enzyme CNX1) (CNX1) [Arabidopsis Thaliana] (GB:Q39054); similar to OSJNBa0084K01.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE04830.1); similar to molybdenum cofactor biosynthesis protein [Zea mays] (GB:ABB30174.1); similar to molybdenum cofactor biosynthesis protein Cnx1 [Hordeum vulgare] (GB:AAF73075.1); contains InterPro domain MoeA, C-terminal, domain IV; (InterPro:IPR005111); contains InterPro domain Bifunctional molybdenum cofactor molybdenum incorporation/glycine receptor clustering protein; (InterPro:IPR012117); contains InterPro domain Molybdenum cofactor biosynthesis protein; (InterPro:IPR008284); contains InterPro domain Molybdopterin binding domain; (InterPro:IPR001453); contains InterPro domain MoeA, N-terminal, domain I and II; (InterPro:IPR005110) -0.071030850320122 -0.794623921820271 0.444290427316188 1 0.356449213373598 16.8205892655284 -0.071030850320122 0.0669686648339384 AT5G67250_at 8.11172791887358 8.31139138153832 9.1609474516668 9.1354518358577 9.66395190220835 9.2496662433579 8.7039636011386 8.40265521342198 7.8952313261374 8.04450202284412 9.09845872495188 8.94335809732186 8.99276493402732 9.0132811059034 8.84222008215652 9.27008727606626 8.85184590199035 8.8559742356806 8.40779032749925 0.162152742016697 0.15256505067593 0.152534915860251 0.152943919936929 0.144610463411778 0.150926143993094 0.148087260449478 0.15319928034722 0.169256381436808 0.158112773750274 0.148916892072003 0.144610463411778 0.148401702963699 0.154204084013848 0.145560435497085 0.144894583268285 0.146919111950586 0.149713468298291 0.159650081898937 5 5 - 26848945 26849475 26849253.364 26848599 26850559 - gene protein_coding_gene TRUE TRUE AT5G67250.1 SKIP2 (SKP1 INTERACTING PARTNER 2); ubiquitin-protein ligase Encodes an SKP1 interacting partner (SKIP2). similar to VFB2 (VIER F-BOX PROTEINE 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G50080.1); similar to Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana tabacum] (GB:AAP03878.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.078346179592003 0.794474361030176 0.444373752128542 1 0.356335576285706 17.3921394536358 0.078346179592003 0.0952484563310275 AT5G66530_at 10.0815177651999 10.0854095063137 9.99441218509844 9.92352275857594 10.6378411038040 10.2416720595704 10.2265335240215 10.2857159633257 9.91956318339437 10.0265316781025 11.2109136217951 11.3252187673891 10.9006270456063 11.1153817537640 11.2622703187888 10.8642174735390 10.4274161110831 10.8163278678422 9.7159655430136 0.0802207551812606 0.07931584128843 0.0865373508524056 0.0830056153122502 0.0835529589686865 0.0843170883187146 0.0862666403759714 0.0798116831895648 0.0911520207551096 0.0901317681207045 0.084338432111859 0.079693505529582 0.080757592276898 0.0822787217835511 0.0812403887696197 0.0806695826253565 0.088179552700684 0.0828110178682556 0.0901267505627595 5 5 - 26571053 26572047 26571554.182 26570972 26572917 - gene protein_coding_gene TRUE TRUE AT5G66530.1 aldose 1-epimerase family protein similar to aldose 1-epimerase family protein [Arabidopsis thaliana] (TAIR:AT5G57330.1); similar to Os09g0327400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062890.1); similar to apospory-associated protein C; APOC [Chlamydomonas reinhardtii] (GB:AAF34174.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain Aldose 1-epimerase; (InterPro:IPR008183) -0.0717624951719447 -0.794004073455708 0.444635830112697 1 0.355978371803156 20.6234031523118 -0.0717624951719447 0.0704000600268369 AT5G08470_at 5.64602474464811 5.62826855965738 6.63066703787036 6.42135761237008 7.24134550810495 6.9386548536007 5.24756798557795 5.25704735885806 4.91998145726101 4.48234062186363 4.86385394953293 5.5615496534894 5.67371459608112 5.54423070451056 5.73484962332422 5.6740242180141 6.00020083618241 5.57806062003253 5.00883237912223 0.249077069802890 0.235758573984027 0.240545028350374 0.236603458036416 0.245529799976196 0.247153018456540 0.238502352115161 0.239490280028632 0.244320040192419 0.239008352279686 0.239877650818248 0.236164507282045 0.237871884282384 0.241841743727978 0.235758573984027 0.235758573984027 0.236088391862956 0.236439668329341 0.248005065261926 5 5 + 2741524 2742478 2742017.1 2735926 2743057 + gene protein_coding_gene TRUE TRUE AT5G08470.1 PEX1 (PEROXISOME 1); ATPase an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to putative peroxisome biogenesis protein PEX1 [Oryza sativa (japonica cultivar-group)] (GB:BAD09074.1); similar to Os08g0556500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062476.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.0702488614915451 0.793740096142152 0.444782981520111 1 0.355777950691718 11.3176310465334 0.0702488614915451 0.0637811994392411 AT5G47455_at 3.80288364414328 3.52289436856142 3.62322495836398 4.18814881609216 4.09538735306916 4.39821263615532 3.11549405782768 3.92419391010202 2.59621915408633 2.32086330673518 3.21526933479326 3.37577277741443 3.44833386384121 2.86614612664468 3.58426837415385 3.58865284990147 3.54312653658748 3.7898286284853 2.75716781944534 0.228077359828419 0.219048243575378 0.242884806201194 0.232916338846030 0.220872827731033 0.219932530150047 0.223242596817171 0.222050832302951 0.241923069096641 0.228094691363182 0.219830614892136 0.219432658338724 0.227798053616112 0.226159367215819 0.221056759596004 0.219345948430505 0.233985989711708 0.221354701653694 0.220731661636928 5 5|0 +|/ 19268045 19268388 19268199 19267948 19269718 + gene protein_coding_gene TRUE TRUE AT5G47455.1|AT5G47455.2|AT5G47455.3|AT5G47455.4|AT5G47455.5|AT5G47455.6 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17310.1); similar to hypothetical protein 26.t00030 [Brassica oleracea] (GB:ABD65009.1)|similar to transcription factor [Arabidopsis thaliana] (TAIR:AT4G17310.2); similar to hypothetical protein 26.t00030 [Brassica oleracea] (GB:ABD65009.1) 0.109986160686944 0.792969321079959 0.445212824339380 1 0.355193085795340 6.82605908715604 0.109986160686944 0.185033520119815 AT5G64550_at 6.4287059533466 6.39343213405524 7.21025458806193 7.4226820718291 6.2146743946448 6.40947367550405 5.52921476504479 6.04140216377019 3.64956073745269 4.60399536862454 4.53089213777638 5.49607207689765 5.329140440959 5.77947355142892 4.85045102715851 5.91925540672247 6.19689657108906 5.99439532086107 3.97622686646585 0.204539045385839 0.214003240980645 0.207707020678268 0.213656186457491 0.206538336906834 0.214528951165251 0.206711718159008 0.208167427594387 0.233531413596304 0.216270407534711 0.209288164014402 0.20261644957166 0.203117287224815 0.207940712798983 0.211643757031171 0.204438810030392 0.205450969713252 0.210164768502648 0.221223136436434 5 5 - 25819042 25819535 25819268.545 25818754 25822206 - gene protein_coding_gene TRUE TRUE AT5G64550.1 loricrin-related similar to loricrin-related [Arabidopsis thaliana] (TAIR:AT5G09670.1); similar to Os04g0458200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052976.1); similar to OSIGBa0097P08.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67071.1); similar to B0414F07.3 [Oryza sativa (indica cultivar-group)] (GB:CAH68133.1) 0.0800910453874197 0.792257063341703 0.445610274817106 1 0.354653068198516 11.2505631636784 0.0800910453874197 0.101889726036510 AT5G60530_at 1.79998932728451 1.93832350826145 1.98612990865684 2.53389147060087 1.12500740654119 1.66636345402202 1.41759369975863 1.13149444691928 1.70833320040158 2.05439493849403 1.5321931437418 1.89210836081610 2.00949594606458 1.77604333019896 1.50085613516862 2.0207338786026 1.5635047671618 1.75028044303912 2.02143566852575 0.191199709588404 0.201864131334455 0.195957827711507 0.194169594211187 0.186297180686609 0.190554683537695 0.192340014794814 0.186297180686609 0.189889744887279 0.199210633390562 0.186726156872009 0.189783136894679 0.194209463577249 0.188214768045101 0.196395578526611 0.186707683892631 0.193856764158565 0.197904444854698 0.205889146820626 5 5 - 24351448 24351992 24351691.182 24351133 24353008 - gene protein_coding_gene TRUE TRUE AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] (TAIR:AT5G60520.1); similar to Curculin-like (mannose-binding) lectin; Root cap [Medicago truncatula] (GB:ABE80074.1); contains InterPro domain Root cap; (InterPro:IPR009646) -0.0942123902761277 -0.791917027702964 0.445800101540765 1 0.354395411467593 3.54170245429209 -0.0942123902761277 0.144176266633432 AT5G66570_at 13.8273454595940 13.9518997405119 14.2527553874834 14.1672223356700 14.2219069087189 14.2176525744078 14.1952858217195 14.3072526067464 14.5675944719491 14.6247366419477 15.1653369281982 15.0815574507964 15.0922226852720 14.8909781224979 14.9901986691278 14.8700646801643 14.7689029787822 15.0683329031357 14.5136967055558 0.0489434908993337 0.0447377793697225 0.0457483999895247 0.0448035428642842 0.0446721990185065 0.0467795716775088 0.0462339477645217 0.0448761636328656 0.0502873248038106 0.0457801336541212 0.0451149143251596 0.0451717553089217 0.0454688717571289 0.0500820901650164 0.048004412791053 0.0459067265180359 0.0491603395744649 0.0451377165867607 0.0460659781745976 5 5 + 26586709 26587108 26586916.455 26585879 26587504 + gene protein_coding_gene TRUE TRUE AT5G66570.1 PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO1 is the major isoform in the wild-type. Identical to Oxygen-evolving enhancer protein 1-1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) (PSBO1) [Arabidopsis Thaliana] (GB:P23321;GB:O81917;GB:Q41998); similar to PSBO-2/PSBO2 (PHOTOSYSTEM II SUBUNIT O-2), oxygen evolving [Arabidopsis thaliana] (TAIR:AT3G50820.1); similar to photosystem II protein [Brassica oleracea] (GB:AAT65501.1); contains InterPro domain Photosystem II manganese-stabilizing protein PsbO; (InterPro:IPR002628) -0.0647734349404425 -0.791593037440494 0.445981019991207 1 0.354150003407877 28.9224777253887 -0.0647734349404425 0.0325528344503137 AT5G05290_at 2.12694195552397 2.57560700770395 2.43991976266083 2.49261585625530 2.04197479346537 2.50301072939533 2.08839036096155 2.21072926770449 1.94230711867870 2.45601103575475 2.51598732737429 2.31956997899354 2.22420607501566 2.53912288873151 2.63048179222709 2.24142424780018 2.13944602239753 2.68496974566199 2.29583238683248 0.183350370231252 0.183350370231252 0.187292168422197 0.190629919790814 0.186521893980194 0.193220823524998 0.187378889557806 0.183350370231252 0.197779981948414 0.187783153761512 0.183350370231252 0.183350370231252 0.192171971922711 0.186466644607330 0.185496342891916 0.193787079230411 0.188616470372473 0.191374357124277 0.191743732310070 5 5|0 +|/ 1569028 1569665 1569371.3 1568695 1569865 + gene protein_coding_gene TRUE TRUE AT5G05290.1 ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A2 precursor (AtEXPA2) (Alpha-expansin-2) (At-EXP2) (AtEx2) (Ath-ExpAlpha-1.12) (EXPA2) [Arabidopsis Thaliana] (GB:Q38866;GB:Q9FLC5); similar to ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) [Arabidopsis thaliana] (TAIR:AT2G40610.1); similar to alpha-expansin 2 [Gossypium hirsutum] (GB:ABB59694.1); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) -0.0835758941195445 -0.790375961448106 0.446661072183722 1 0.353228912595056 4.63154097847412 -0.0835758941195445 0.113690216901875 AT5G09550_at 0.81028409505804 1.28745272238124 1.59363489461101 1.40664212824438 1.35091124040769 1.09453592945092 1.13880562234059 1.33398376597253 1.21185704235264 1.08876480133272 0.916743852268792 1.02086574707643 1.15577520880878 1.52831009636506 1.02093325705979 0.961383326202444 0.926631061773767 1.32309141482688 1.67337529960311 0.194421500501075 0.197314654769162 0.197768709146335 0.191156426931147 0.191156426931147 0.197986141775547 0.194881019298253 0.199373174860592 0.199561779790534 0.195554200995581 0.209325427658018 0.201562126865291 0.20217143817206 0.19496476821787 0.201463149124079 0.196155711890014 0.198253489626961 0.195594221381772 0.19481183264544 5 5|0 +|/ 2965388 2966099 2965773.5 2963778 2966728 + gene protein_coding_gene TRUE TRUE AT5G09550.1 RAB GDP-dissociation inhibitor similar to ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2), RAB GDP-dissociation inhibitor [Arabidopsis thaliana] (TAIR:AT3G59920.1); similar to ATGDI1 (Arabidopsis thaliana guanosine diphosphate dissociation inhibitor 1) [Arabidopsis thaliana] (TAIR:AT2G44100.1); similar to GDP dissociation inhibitor [Nicotiana tabacum] (GB:AAB80717.1); similar to GDP dissociation inhibitor 1-like [Solanum tuberosum] (GB:ABB87112.1); similar to Rab GDI protein [Medicago truncatula] (GB:ABE93091.1); contains InterPro domain Rab GTPase activator; (InterPro:IPR002005); contains InterPro domain Rab GDI protein; (InterPro:IPR000806) -0.0806487919793188 -0.789154693686031 0.447344146484429 1 0.352305903526005 2.46772252979692 -0.0806487919793188 0.104762982936975 AT5G17540_at 0.964111465951966 0.717921078147431 0.72272892786887 0.887875156254156 0.946113360452555 1.12922555473714 1.31999374787474 0.668958193813431 0.899404430408461 0.857465182396466 1.47176959370845 0.89469248688698 1.36890274664654 0.96759605330998 1.16622337070434 0.899914239235625 1.25737753993594 1.22802537629953 0.81367619502202 0.232122344918296 0.218436699742795 0.227492033608679 0.225384270664053 0.223083172117935 0.225966311903020 0.222182381368261 0.228788384067845 0.229190163997086 0.219913233015113 0.222001331346129 0.225628098456193 0.219847142383991 0.223160220030412 0.218436699742795 0.225516241767921 0.230404143426595 0.223996761523079 0.223498392427259 5 5 - 5782174 5782637 5782408.818 5781989 5783708 - gene protein_coding_gene TRUE TRUE AT5G17540.1 transferase family protein similar to CHAT (ACETYL COA:(Z)-3-HEXEN-1-OL ACETYLTRANSFERASE), acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase [Arabidopsis thaliana] (TAIR:AT3G03480.1); similar to benzoyl coenzyme A: benzyl alcohol benzoyl transferase [Petunia x hybrida] (GB:AAT68601.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.0879275649243405 0.787450590810037 0.448298415810514 1 0.351020078428557 1.92644657486249 0.0879275649243405 0.127786586102265 AT5G13130_at 1.22814190249784 1.11480170691584 1.50628889113083 2.11404707596784 1.22114999092810 1.12548219927675 1.02267823320284 1.81148450546235 1.75898569325123 1.99411855743928 1.43859339158225 1.43869119629548 1.75975717643638 1.56702078361209 1.41039018610262 1.56425029835278 1.45125178336293 1.8898202591233 1.51826769303748 0.194681053035821 0.187739953953973 0.190183230287250 0.19206272677648 0.187739953953973 0.194391144475976 0.195939942838057 0.199214959818295 0.193368462521831 0.189446737778196 0.196381166386184 0.192624590069125 0.193419297795251 0.195593056047784 0.191373848534691 0.196802198888381 0.197264783496969 0.193004233048833 0.197489275140994 5 5|0 +|/ 4169308 4170120 4169586.667 4166758 4170327 + gene protein_coding_gene TRUE TRUE AT5G13130.1 ATP binding similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24970.1); similar to Os02g0469300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046827.1); similar to OSIGBa0148D14.7 [Oryza sativa (indica cultivar-group)] (GB:CAH66201.1); similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAK70637.1); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) -0.104867985738658 -0.786674567353877 0.448733415149108 1 0.35043534409166 3.05405724597337 -0.104867985738658 0.174226058224091 AT5G63590_at 1.95975120433483 2.20288567674364 2.58369983661028 2.45574358649939 2.12992556895519 1.94084539316242 1.96998492137163 1.91582028241401 2.14758263511233 1.67336387820106 2.15687440438024 1.94609232836314 2.41158093389727 1.97341084442747 2.19938069967137 2.37169059590413 2.15631871101914 2.09212788091762 1.94299910335215 0.195258480753811 0.202968180575439 0.200379681174892 0.217240791319412 0.196647467761755 0.198703027130635 0.20140433052324 0.200052944901402 0.199587034013725 0.203815791236251 0.196223343318248 0.191569000775698 0.201566769913454 0.192017298849242 0.20077394939582 0.201378293439231 0.205104909456029 0.205665415257809 0.191838255363598 5 5 - 25474462 25474988 25474755.818 25474219 25475696 - gene protein_coding_gene TRUE TRUE AT5G63590.1 FLS (Flavonol synthase); flavonol synthase similar to FLS (FLAVONOL SYNTHASE) [Arabidopsis thaliana] (TAIR:AT5G08640.1); similar to Flavonol synthase/flavanone 3-hydroxylase (FLS) (CitFLS) (GB:Q9ZWQ9); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.068475110436002 0.786104523127667 0.449053127990813 1 0.350006138989009 4.18720693645029 0.068475110436002 0.058474117047956 AT5G44120_at 0.644213231833005 0.627109476422808 0.526187981279938 0.615353723977344 0.509411430943571 0.669258376630843 0.485659622864213 0.543552355389586 0.988959341601721 0.544634456539378 0.792011900693141 0.723864199393645 1.03484263921151 0.812481802348885 0.908197933331905 1.00513665799919 0.879657010898902 1.09245382098898 0.498997718215517 0.206010741509600 0.206679581232528 0.212341544517253 0.207059234573994 0.205549268432221 0.203877906422939 0.210573155363589 0.208819008497957 0.208334591443278 0.211028670009054 0.206396528230179 0.209749149807189 0.206046002803604 0.218715870430843 0.208216241571536 0.20945296272753 0.216641111395645 0.207783373634993 0.209814235994303 5 5 - 17773706 17774323 17773983.636 17773491 17775515 - gene protein_coding_gene TRUE TRUE AT5G44120.1|AT5G44120.2|AT5G44120.3 CRA1 (CRUCIFERINA); nutrient reservoir Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Identical to 12S seed storage protein CRA1 precursor [Contains: 12S seed storage protein CRA1 alpha chain (12S seed storage protein CRA1 acidic chain); 12S seed storage protein CRA1 beta chain (12S seed storage protein CRA1 basic chain)] (CRA1) [Arabidopsis Thaliana] (GB:P15455;GB:Q9FFH7); similar to CRU2 (CRUCIFERIN 2), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G03880.1); similar to cruciferin [Brassica napus] (GB:BAC80212.1); similar to Cruciferin BnC1 precursor (11S globulin) (12S storage protein) [Contains: Cruciferin BnC1 subunit alpha; Cruciferin BnC1 subunit beta] (GB:P33523); similar to cruciferin precursor (GB:AAA32988.1); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051)|Identical to 12S seed storage protein CRA1 precursor [Contains: 12S seed storage protein CRA1 alpha chain (12S seed storage protein CRA1 acidic chain); 12S seed storage protein CRA1 beta chain (12S seed storage protein CRA1 basic chain)] (CRA1) [Arabidopsis Thaliana] (GB:P15455;GB:Q9FFH7); similar to CRU2 (CRUCIFERIN 2), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G03880.1); similar to Cruciferin BnC1 precursor (11S globulin) (12S storage protein) [Contains: Cruciferin BnC1 subunit alpha; Cruciferin BnC1 subunit beta] (GB:P33523); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051)|Identical to 12S seed storage protein CRA1 precursor [Contains: 12S seed storage protein CRA1 alpha chain (12S seed storage protein CRA1 acidic chain); 12S seed storage protein CRA1 beta chain (12S seed storage protein CRA1 basic chain)] (CRA1) [Arabidopsis Thaliana] (GB:P15455;GB:Q9FFH7); similar to CRU2 (CRUCIFERIN 2), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT1G03880.1); similar to Cruciferin BnC1 precursor (11S globulin) (12S storage protein) [Contains: Cruciferin BnC1 subunit alpha; Cruciferin BnC1 subunit beta] (GB:P33523); similar to cruciferin precursor (GB:AAA32988.1); similar to cruciferin-like protein [Brassica napus] (GB:ABD14346.1); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) 0.064408863254089 0.785968088555477 0.449129670146613 1 0.349903453571706 1.3693989004479 0.064408863254089 0.0333531978732236 AT5G16990_at 9.0169575350053 8.8917727685516 9.86022532462794 9.74082743155987 10.0384064515056 9.72838831844414 9.8841330576106 9.54577473925744 8.8650590978545 9.0105088283081 9.94988365201682 9.95276130067255 9.96867221271275 10.0877027558818 9.83682078788618 9.9484579376955 10.0842833263952 10.0432440492285 8.86576409683233 0.106390222897110 0.104882371604278 0.101037989359302 0.0998411084191672 0.0973813274924065 0.103927435167852 0.099047398824457 0.0986668666917837 0.108620683407875 0.100914363233011 0.105929007658319 0.0992008461102515 0.0980611057418614 0.0984237968912974 0.101520703961158 0.098852717413071 0.102269282093328 0.0973813274924065 0.103418499036223 5 0|5 /|- 5581870 5582189 5582049.8 5581661 5584032 - gene protein_coding_gene TRUE TRUE AT5G16990.1 NADP-dependent oxidoreductase, putative Identical to Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74) (P2) [Arabidopsis Thaliana] (GB:Q39173;GB:Q9LFK3); similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G17000.1); similar to AT-AER (ALKENAL REDUCTASE), 2-alkenal reductase [Arabidopsis thaliana] (TAIR:AT5G16970.1); similar to allyl alcohol dehydrogenase [Nicotiana tabacum] (GB:BAA89423.1); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149) 0.0745874398102644 0.785430707661497 0.449431232684269 1 0.349499154792577 19.0371885002250 0.0745874398102644 0.0848717443232723 AT5G06200_at 0.507559533013433 0.639889922358614 0.730049184548181 0.763017115954874 0.727552921589274 0.755678295820622 0.645322375893478 0.472539765914435 0.636380219777064 1.16573480910489 1.13757810712645 1.05627913560820 0.85332592119451 1.09522231763991 0.524940608270428 1.10575849545629 1.08746480451977 0.876389141010549 0.905525333989989 0.181507270364843 0.185661058976701 0.187719276836214 0.181994935936559 0.184552393970682 0.192381896515161 0.181507270364843 0.190802305675250 0.205026472753688 0.186074886134224 0.188449894648624 0.183753219200637 0.185662883483033 0.197908249082513 0.195914027476528 0.184077471544123 0.197245590318607 0.189026057238274 0.194335176271196 5 5|0 +|/ 1877363 1878067 1877672.8 1877334 1878117 + gene protein_coding_gene TRUE TRUE AT5G06200.1 integral membrane family protein similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT3G11550.1); similar to unknown [Striga asiatica] (GB:ABD98039.1); contains InterPro domain Protein of unknown function DUF588; (InterPro:IPR006702); contains InterPro domain Conserved hypothetical protein CHP1569, integral membrane plant; (InterPro:IPR006459) 0.0650054978188767 0.785281343766918 0.449515074745298 1 0.349386824090857 1.59003444137524 0.0650054978188767 0.0384021843003812 AT5G10280_at 0.754382090960136 0.954611987721294 0.844042186801306 0.459787433183286 0.906184216063867 0.709026091618236 0.659598863692195 0.70273208786956 1.10008050076209 1.20609510536673 1.08171972296483 0.981447994513624 0.93922464847261 1.22501896550452 1.15050964653623 1.20402795965637 0.858296201420843 1.52731916434298 1.01155919177131 0.238122797625059 0.242192111725684 0.248199809492763 0.240289256370936 0.244496379495598 0.245006688186337 0.245602298910688 0.244058751780028 0.255407542113853 0.243504440880095 0.242709119831000 0.238357815090364 0.244177042112982 0.241140400752529 0.237100043276432 0.245571151846938 0.248418374191040 0.246473109148759 0.253257616090385 5 5 + 3233372 3233931 3233622.182 3232570 3234211 + gene protein_coding_gene TRUE TRUE AT5G10280.1 MYB92 (myb domain protein 92); DNA binding / transcription factor Encodes a putative transcription factor (MYB92). similar to AtMYB53 (myb domain protein 53), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65230.1); similar to 4D11_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67537.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0737826453224347 -0.782899893048718 0.450853222096468 1 0.347598374091122 1.86222418835201 -0.0737826453224347 0.082718595743869 AT5G40840_at 1.77317096565373 1.59057909137369 1.71264563738047 1.79556140770025 1.90417159785325 1.37695658374010 1.00623646078156 1.44096975339663 1.43535883381179 1.72057708547480 2.12956342196353 1.6723574853909 2.09936993163069 1.57474093364962 1.74039402823658 1.61392507467737 1.96346375583759 1.65849833172443 1.76009962282395 0.212734983649343 0.210966622095017 0.211875975177523 0.214652286042600 0.213265947003001 0.215893075666570 0.212652022880527 0.220497438617214 0.229358313395509 0.212550366368986 0.213868642927039 0.210569539119753 0.214625063612367 0.215002674901406 0.221852255511731 0.218040299958575 0.220149822698602 0.215706842785583 0.216305610354307 5 5 - 16376850 16377934 16377644.545 16376658 16381042 - gene protein_coding_gene TRUE TRUE AT5G40840.1|AT5G40840.2 SYN2 (Sister chromatid cohesion 1 (SCC1) protein homolog 2) Cohesion family protein SYN2 (SYN2). Identical to Sister chromatid cohesion 1 protein 2 (SCC1 homolog 2) (AtRAD21-1) (SYN2) [Arabidopsis Thaliana] (GB:Q9FQ20;GB:Q8W1Y1;GB:Q8W1Y2;GB:Q9FKS2); similar to ATRAD21.3 (Arabidopsis homolog of RAD21 3) [Arabidopsis thaliana] (TAIR:AT5G16270.1); similar to Rad21/Rec8 like protein, C-terminal; Rad21/Rec8 like protein, N-terminal [Medicago truncatula] (GB:ABE79736.1); contains InterPro domain Rad21/Rec8 like protein, C-terminal; (InterPro:IPR006909); contains InterPro domain Rad21/Rec8 like protein, N-terminal; (InterPro:IPR006910) 0.0857623809612313 0.781699666169217 0.451528614041823 1 0.346698830044704 3.2976452544478 0.0857623809612313 0.123241595912907 AT5G51060_at 2.19633216231572 2.04867364925822 2.52771750210717 2.50830872919131 2.60203115139011 2.09082936505028 2.52450233406439 2.31876167915172 1.80909111400155 2.30440797644772 2.49595065886597 2.44811766421389 2.62775904113243 2.1027564627821 2.26635059980131 2.41183015652112 2.24207949689479 2.34836544291771 2.53087565069981 0.194963866574008 0.192188885742230 0.191302814595010 0.193552827045138 0.197926202360273 0.192352132320783 0.198137599007241 0.191302814595010 0.208713965760390 0.196325076925899 0.194932884317686 0.201556777725922 0.199947479251078 0.197455085776164 0.198257391544026 0.191302814595010 0.194080402389237 0.203977247327228 0.197368281476162 5 5 - 20774728 20775348 20775098.818 20774510 20779657 - gene protein_coding_gene TRUE TRUE AT5G51060.1 RHD2 (ROOT HAIR DEFECTIVE 2) RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differential zone in the elongating root hairs. similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to respiratory burst oxidase, putative / NADPH oxidase, putative [Arabidopsis thaliana] (TAIR:AT4G25090.1); similar to ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07390.1); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); similar to whitefly-induced gp91-phox [Lycopersicon esculentum] (GB:AAF73104.1); similar to respiratory burst oxidase homolog [Nicotiana benthamiana] (GB:BAC56865.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916); contains InterPro domain NADPH oxidase Respiratory burst; (InterPro:IPR013623) -0.0780965862413865 -0.781592518476795 0.451588940115488 1 0.346618584398071 4.64349095695321 -0.0780965862413865 0.0987831765792279 AT5G49270_at 1.52432299242683 1.84503850259475 2.33944997524320 1.96182062640278 1.72987555923129 2.06552903727463 1.74433118469501 1.59606210332250 1.79464636651279 2.33802112689868 1.98919789135693 1.58747586650782 1.68965203189935 1.70922809362732 1.75655867117342 1.67196416098340 2.02945065683029 1.87395225871749 1.85677541118968 0.204720405749520 0.199775187370948 0.205790936308217 0.204104024568539 0.205328265910585 0.213558874988651 0.206948316199043 0.199268824807126 0.218140953729015 0.204878015362423 0.199268824807126 0.206366260499646 0.211360745463279 0.202943159164986 0.199268824807126 0.199269885706075 0.203529101109813 0.217548721101128 0.204155998553289 5 5 - 19989251 19989809 19989569.636 19989135 19991670 - gene protein_coding_gene TRUE TRUE AT5G49270.1 COBL9/MRH4/SHV2 (COBRA-LIKE 9); hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding Involved in root hair development. Identical to COBRA-like protein 9 precursor (COBL9) [Arabidopsis Thaliana] (GB:Q9FJ13); similar to phytochelatin synthetase-related [Arabidopsis thaliana] (TAIR:AT3G20580.1); similar to ATSEB1 [Arabidopsis thaliana] (TAIR:AT4G16120.1); similar to phytochelatin synthetase-related [Arabidopsis thaliana] (TAIR:AT3G16860.1); similar to Phytochelatin synthetase-like conserved re (GB:ABE84746.1); similar to roothairless 3 [Zea mays] (GB:AAQ81633.1); similar to Os03g0301200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049863.1); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) -0.0803834136141482 -0.780810679309918 0.452029287836481 1 0.346033339021013 3.74326170869257 -0.0803834136141482 0.106693405981420 AT5G04040_at 9.15472898574059 9.30451724539813 9.85832513941598 10.0465816408031 10.3161229498525 10.1965697577373 9.1553638376624 9.09996574486132 9.29251759872932 9.21341865253788 9.81772503424727 9.78774565919943 9.82401574562372 10.1057536924391 9.35836301666632 10.0988641407515 9.77420720654364 9.82142701120796 9.09828295711037 0.0883551944096957 0.0849620530114248 0.0955691412106154 0.085685195811406 0.0846631819228595 0.0913253058130928 0.087633676819708 0.0931132230270168 0.0923994447262916 0.0858201505460083 0.085370588708513 0.083566993321948 0.0846701843554247 0.085293816015017 0.085945330296495 0.083566993321948 0.0855661338876819 0.0922145877888822 0.0843317764488486 5 5 + 1092415 1092965 1092673.091 1089651 1093178 + gene protein_coding_gene TRUE TRUE AT5G04040.1 SDP1 (SUGAR-DEPENDENT1); triacylglycerol lipase Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. similar to SDP1-LIKE (SDP1-LIKE) [Arabidopsis thaliana] (TAIR:AT3G57140.2); similar to P0460E08.35 [Oryza sativa (japonica cultivar-group)] (GB:BAB61223.1); similar to phospholipase, patatin family, putative [Medicago truncatula] (GB:ABE78088.1); similar to Patatin [Medicago truncatula] (GB:ABE94194.1); contains InterPro domain Patatin; (InterPro:IPR002641) 0.0659374553994323 0.779966028907006 0.452505324836795 1 0.345401657528662 19.1539814582476 0.0659374553994323 0.0474684076952264 AT5G14230_at 3.13552927081369 2.90146814928946 3.31018654363631 2.72452379926094 2.48818108134944 3.29195946938006 2.91808715204206 2.80247835376051 3.39184452660842 2.84550029838958 3.63630129985137 4.19775461731369 3.78447534919144 3.18645302595050 3.94410666128772 4.24594456986558 3.31785573378447 3.91596617519625 2.84320783792833 0.192840395934893 0.192530104252160 0.190788614823148 0.196086914518674 0.191651179526070 0.194240599483709 0.192922777556808 0.190788614823148 0.192416474877551 0.198469645743959 0.1978940227483 0.194092585184186 0.194078140179102 0.196682123106683 0.202001858032148 0.196346585711037 0.197391635789329 0.191821994773407 0.192638705613234 5 5 + 4595179 4595718 4595399.273 4591746 4595967 + gene protein_coding_gene TRUE TRUE AT5G14230.1 ankyrin repeat family protein similar to XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G57740.1); similar to OSJNBa0084K20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAD41131.1); similar to Os04g0490300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053162.1); similar to Ankyrin [Medicago truncatula] (GB:ABE79732.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) -0.105130912219621 -0.777910079979149 0.453665395136131 1 0.343866616924221 6.34928076079018 -0.105130912219621 0.177936093731507 AT5G11550_at 3.39613737771967 3.12194768982618 2.9878128509295 2.77442489153226 2.99536614568594 3.37015142583442 3.00201777243719 3.08792492969875 3.00009480793050 3.10117162457636 4.19421364485477 4.76466401776298 4.02135080353827 3.94855520632525 4.82226229739087 4.31672285438663 3.6303057265108 4.54349176154361 3.43485952618836 0.281332126109108 0.280491375321529 0.290997000698305 0.285205838980316 0.289056781520042 0.280975744541599 0.28372256169575 0.276484361687463 0.290516228442164 0.280531684104017 0.276311206404211 0.294208761297544 0.283988147731987 0.27908985222729 0.289133268310801 0.278607142905893 0.276311206404211 0.276311206404211 0.293834114797559 5 5 - 3708247 3708772 3708524.818 3708010 3709247 - gene protein_coding_gene TRUE TRUE AT5G11550.1 binding similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19380.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85101.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.0751227335159421 -0.777504002958665 0.453894751709606 1 0.343563849595882 6.82142510642677 -0.0751227335159421 0.0896814704498647 AT5G37830_at 8.11258194815643 8.15074446519345 8.79373465050974 8.8922100079219 9.05986305670194 8.58612867514527 7.4542533126418 7.76614755237493 7.27911833572573 7.32215487729595 8.42431094437847 8.49671095548342 8.41503451914263 8.38387199000856 8.45911935864668 8.4074914675742 8.15108457656304 8.16984867067 7.51197563985094 0.165901806274056 0.161961678801669 0.165613184413708 0.173578189428208 0.160388097466934 0.174003128847727 0.162245083121531 0.156750333293442 0.167125589258951 0.162895473817094 0.160932129776705 0.151641916052604 0.152393084320253 0.164271455680589 0.157406687448703 0.150651493549913 0.176307051835916 0.164861818448791 0.165133544087812 5 5 - 15073890 15074513 15074245.727 15073418 15078007 - gene protein_coding_gene TRUE TRUE AT5G37830.1 hydantoinase/oxoprolinase family protein similar to Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal [Medicago truncatula] (GB:ABE93080.1); similar to putative 5-oxoprolinase [Oryza sativa (japonica cultivar-group)] (GB:BAC05619.1); similar to 5-oxoprolinase (ATP-hydrolysing) [Rattus norve (GB:NP_446356.1); contains InterPro domain Hydantoinaseoxoprolinase, N-terminal; (InterPro:IPR008040); contains InterPro domain Hydantoinase B/oxoprolinase; (InterPro:IPR003692); contains InterPro domain Hydantoinase/oxoprolinase; (InterPro:IPR002821) 0.0776865420649862 0.77441261870287 0.455643255648194 1 0.341263524803402 16.2192164642136 0.0776865420649862 0.0998416015010595 AT5G04560_at 5.72486672606589 6.12528689384989 6.61084634171132 6.35220649221258 6.50963276432034 6.27456254563421 4.57852195257621 4.94495973204409 5.16085866058945 4.8080953619967 6.160446689013 6.19331024381428 6.03136394688237 6.01024514065347 5.89762319461827 5.97947986853586 5.67724497204192 5.73749596327619 4.71317717560431 0.182482697420414 0.180241543017602 0.181358902051186 0.186142457558925 0.182812908831291 0.180417680737436 0.182672945506544 0.183238852039857 0.181544206474206 0.184974491218738 0.183044939500809 0.184861938800374 0.179063816941182 0.179950854639063 0.178388898632800 0.179314429625434 0.18565855983347 0.179571377376866 0.182417791419639 5 5|0 +|/ 1312452 1318043 1314916.923 1309194 1318402 + gene protein_coding_gene TRUE TRUE AT5G04560.1|AT5G04560.2 DME (DEMETER) Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. Identical to Transcriptional activator DEMETER (EC 3.2.2.-) (DNA glycosylase- related protein DME) (DME) [Arabidopsis Thaliana] (GB:Q8LK56;GB:Q1WEY5;GB:Q84TL4;GB:Q9LZ67;GB:Q9LZ68;GB:Q9LZ69); similar to ROS1 (repressor of silencing1) [Arabidopsis thaliana] (TAIR:AT2G36490.1); similar to Os01g0217900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042408.1); similar to putative endonuclease III protein [Ipomoea trifida] (GB:AAS79601.1); similar to Os02g0494700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046886.1); contains InterPro domain Iron-sulfur cluster loop; (InterPro:IPR003651); contains InterPro domain A/G-specific adenine glycosylase MutY; (InterPro:IPR013003); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265) 0.0811958257025507 0.773699603954691 0.456047156988969 1 0.340734115198794 11.3175829235941 0.0811958257025507 0.111719557621684 AT5G23260_at 0.843801041800657 0.603449803177223 0.760928656814178 0.889954854590352 0.811160941460151 1.01330039330827 0.912163735202383 0.521380711485466 0.843761506242937 1.04805618361375 0.85606763429044 0.6294796759629 0.92530469683082 1.66148787055394 0.943505335271252 1.00523512153662 1.23948864032737 0.900070754041144 0.80870663046646 0.195255846829494 0.199140507058747 0.201147085612772 0.195255846829494 0.205521773521392 0.202308486121096 0.202690303846332 0.200249392874061 0.197890779616677 0.197300315983914 0.206836942701351 0.198611696183518 0.203574303228421 0.203223792985422 0.195255846829494 0.195255846829494 0.199999870898196 0.201965551441731 0.199272666306157 5 5|0 +|/ 7837389 7838315 7837830.1 7836099 7838508 + gene protein_coding_gene TRUE TRUE AT5G23260.1|AT5G23260.2 TT16 (TRANSPARENT TESTA16); transcription factor Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Identical to TRANSPARENT TESTA 16 protein (Arabidopsis BSISTER MADS-box protein) (TT16) [Arabidopsis Thaliana] (GB:Q8RYD9;GB:Q9FMX4); similar to SEP4 (SEPALLATA4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G03710.2); similar to MADS-box protein FBP24 (Floral-binding protein 24) (GB:Q9ATE5); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487)|Identical to TRANSPARENT TESTA 16 protein (Arabidopsis BSISTER MADS-box protein) (TT16) [Arabidopsis Thaliana] (GB:Q8RYD9;GB:Q9FMX4); similar to CAL (CAULIFLOWER), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G26310.1); similar to AGL21 (AGAMOUS-LIKE 21), transcription factor [Arabidopsis thaliana] (TAIR:AT4G37940.1); similar to SEP4 (SEPALLATA4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G03710.2); similar to MADS-box protein FBP24 (Floral-binding protein 24) (GB:Q9ATE5); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) 0.0746025537875686 0.772387377690759 0.456791096990216 1 0.339760922451787 1.75464488700126 0.0746025537875686 0.0895862070747984 AT5G65280_at 2.51956501618991 2.18136191015177 2.58162452232276 2.24449124421597 1.77907026230830 2.06163948391756 2.97928727414806 2.3657270402743 2.59811919348606 2.25949297438651 2.84963598994292 3.72118023325057 2.22343961215995 3.01825557579838 3.45170921694285 2.81230733814336 2.60030922580140 3.20105161387420 1.96248999693937 0.199321790726188 0.201627831168516 0.196215829736725 0.197713352822602 0.195687023282598 0.198940840364105 0.202983175987871 0.200804914706082 0.203471191926491 0.199310830700259 0.203936534214750 0.203248531587979 0.213429854741171 0.199374918831624 0.202055367652336 0.200647058801017 0.203005770926811 0.197323163821288 0.200793698144508 5 5 - 26103378 26103859 26103589.273 26103199 26105379 - gene protein_coding_gene TRUE TRUE AT5G65280.1 lanthionine synthetase C-like family protein similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G52920.1); similar to putative 7-transmembrane G-protein-coupled receptor [Solanum chacoense] (GB:AAF75794.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Lanthionine synthetase C-like; (InterPro:IPR007822) -0.0914618187197334 -0.771814369426695 0.457116197578235 1 0.339336418314082 4.968147588696 -0.0914618187197334 0.143159381859515 AT5G18850_at 7.2372936679363 7.58811783962497 7.91816991808384 8.19477183371513 8.74937338122822 8.38245791185886 7.70065225219498 8.05036018879623 7.22526433540527 7.27653864268148 8.3908773978311 8.09155598176384 8.70581908569782 8.64671324621804 7.9225960217558 8.7375326143595 8.1707217491064 8.24078562229647 7.50416573164705 0.171231446068629 0.162533409142576 0.173549636597373 0.170598249575537 0.169685729487347 0.173790504900776 0.167808500067083 0.170193272657244 0.176684866901089 0.162533409142576 0.168327195154336 0.168599775911741 0.164498504582336 0.175081386249318 0.171623246355729 0.164928859524733 0.176884045784022 0.167640108713498 0.165241581161853 5 5 + 6286906 6287222 6287058.364 6286849 6287592 + gene protein_coding_gene TRUE TRUE AT5G18850.1 unknown protein -0.0824655302784607 -0.770222106333347 0.458020362381401 1 0.338158280278927 15.8269736832414 -0.0824655302784607 0.116925139091466 AT5G09770_at 6.56572910809235 6.8855515280341 7.40453653943321 7.22338049424927 7.76546280904734 7.97604779273259 6.15376258650254 6.31112475472307 6.02714697268101 5.81246838941106 6.77211864768588 6.54299560149597 6.82444270663824 6.66694329304534 7.27719504793715 6.66998579413438 7.14882220048938 6.43241143601799 6.0421243152012 0.205067200204014 0.205818280957714 0.205572425183535 0.215077487698602 0.215770968870542 0.203432720217114 0.202497988555099 0.222544231156908 0.212134312924015 0.219603934850511 0.199468243792893 0.199128906536534 0.199128906536534 0.206231626498874 0.217627022611122 0.201997165807209 0.220263383586849 0.214440122899615 0.207779387481208 5 5|0 -|/ 3035291 3036490 3035713.778 3035041 3036562 - gene protein_coding_gene TRUE TRUE AT5G09770.1 ribosomal protein L17 family protein similar to ribosomal protein L17 family protein [Arabidopsis thaliana] (TAIR:AT5G64650.1); similar to Ribosomal protein L17 [Medicago truncatula] (GB:ABE93922.1); contains InterPro domain Ribosomal protein L17; (InterPro:IPR000456) -0.0713511979686485 -0.769086565656565 0.458665880401424 1 0.337319394497742 13.4119215682826 -0.0713511979686485 0.0782032437181235 AT5G51690_at 3.04456768235978 2.80459320929738 3.30776717624394 3.06642382259358 3.7791885540069 3.53965280967723 2.94141228237962 3.22773462056631 2.83481553916463 2.65348157478471 3.05869903657102 3.16045777502457 3.0537429973678 3.29809678248518 3.22086615974441 3.11133612754219 3.42995116941054 3.09684885293886 2.18051609017005 0.202338079449339 0.198130791795857 0.204769845562123 0.201782918856574 0.207778325353119 0.213497302080483 0.201567633270796 0.197933012142948 0.209592723517985 0.213802136912642 0.204442942066985 0.200791896722023 0.197933012142948 0.209703035888343 0.202722409200423 0.207214370170425 0.200391784499731 0.206063638871426 0.197933012142948 5 5 - 21016299 21016816 21016558.545 21014639 21018272 - gene protein_coding_gene TRUE TRUE AT5G51690.1 ACS12 (1-Amino-cyclopropane-1-carboxylate synthase 12); 1-aminocyclopropane-1-carboxylate synthase Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. Identical to Probable aminotransferase ACS12 (EC 2.6.1.-) (ACS12) [Arabidopsis Thaliana] (GB:Q8GYY0;GB:Q9C5W4;GB:Q9FLJ0); similar to ACS10 (ACC SYNTHASE 10), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT1G62960.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Rosa hybrid cultivar 'Kardinal'] (GB:AAQ88100.1); similar to Os06g0130400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056689.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Aminotransferases class-I pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) 0.0736998122877329 0.769035493979179 0.458694926732553 1 0.337281690841565 6.08142798497827 0.0736998122877329 0.0874212515673938 AT5G58940_at 4.62942501828806 4.95171345860658 5.40331630720558 5.62282491169697 5.55630687061641 4.14915864789980 2.64541968994934 2.98824073278097 4.78391970720724 3.73005460628499 4.20519885203548 4.66858417362491 3.70289144350245 4.6135705841051 3.91794106315585 3.91079169216215 3.64088752578126 4.16472610235562 3.89941962389982 0.231411314597476 0.220316290517463 0.218804121084070 0.230638477873352 0.230625039085776 0.224387124654792 0.224375753842134 0.218201682107701 0.215094024715132 0.225827465741992 0.217149083366218 0.214561767615793 0.213740279255182 0.222573834676983 0.219131567353041 0.214445803069071 0.220989194276553 0.219667738487103 0.222818362867300 5 5 + 23817264 23817837 23817524.364 23815812 23818049 + gene protein_coding_gene TRUE TRUE AT5G58940.1 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1); kinase Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA similar to CRCK2 (calmodulin-binding receptor-like cytoplasmic kinase 2), kinase [Arabidopsis thaliana] (TAIR:AT4G00330.1); similar to calcium/calmodulin-regulated receptor-like kinase [Medicago sativa] (GB:AAT68475.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.136980542296277 -0.768578155236619 0.458955084711655 1 0.336944159519289 8.61373665899098 -0.136980542296277 0.259561589133671 AT5G06500_at 1.63339719054329 1.13872676660351 1.38927752042129 1.64997102010586 1.33944966443143 1.93981993034851 0.99982367856613 1.36700116287692 2.15759417400452 1.25832709863971 1.53777677157957 1.51049957349337 1.85561370055923 2.06245102785702 1.39602019138122 2.17911920549160 1.88691168421226 2.10700995899472 1.66114021645628 0.191783375880657 0.201742616548916 0.188037867958136 0.195048843184584 0.190441238630892 0.187737657418440 0.186501134416129 0.188764217891566 0.20286303763356 0.205710753232604 0.196223670030596 0.194093299857036 0.189214327255740 0.189756606749951 0.186916999148335 0.188495529521060 0.20006761609267 0.187122671290385 0.210534048721968 5 5 + 1982602 1983142 1982848.636 1982445 1983173 + gene protein_coding_gene TRUE TRUE AT5G06500.1 MADS-box family protein similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT2G40210.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE94129.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) 0.0953706871716798 0.767474381100382 0.459583359164966 1 0.336130270446973 3.18682291368527 0.0953706871716798 0.155549449852941 AT5G24165_at 10.6920187790199 10.8944707521763 11.5602738203267 11.4974723002978 11.6245899375545 11.4765670955124 11.3360528378274 11.2982390470973 10.9537513854299 11.4602400266692 11.6748695029591 11.8204727821941 11.8493248784444 11.6559108398645 11.5659851238654 11.7880638910343 11.7248499120062 11.6318784712618 11.2750198952773 0.100157628516662 0.096066565787001 0.0963736602517995 0.0959576635602544 0.0978111429812917 0.0950095463443552 0.103804373061765 0.0984873283240958 0.105640789406351 0.0938907334912317 0.0961136113230689 0.0925914539736936 0.0925914539736936 0.0995254314692074 0.0976962689718498 0.0925914539736936 0.0986636026711817 0.100114540661064 0.0964816319571074 5 5|0 +|/ 8188634 8188921 8188815.2 8188563 8189279 + gene protein_coding_gene TRUE TRUE AT5G24165.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23885.1); similar to Os06g0530200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057777.1) -0.0644265962260202 -0.76633518161021 0.460232376835434 1 0.335291347578145 22.7692555017245 -0.0644265962260202 0.0452171261865058 AT5G62310_at 0.732446237031273 0.865522835931617 0.662836097620038 0.605088371411849 0.867532035990572 1.03991887822652 0.753889485862616 0.627697721707602 0.998804529990332 1.29857248012698 0.73373603568187 1.12505963251716 1.22168894446016 1.20233338412800 1.06963136980427 1.10388111773596 1.08692711825654 1.47224002735065 1.23295542159842 0.206959391953818 0.207163979995902 0.208074845541683 0.208010498134258 0.201298194264710 0.203188743519684 0.202567338192415 0.208404915883586 0.207764065062586 0.203493692839137 0.210990023533374 0.201581437214549 0.202442872183886 0.205807950864222 0.202737910134190 0.201385193749506 0.214508281146386 0.205998688204285 0.20123842908542 5 5|0 +|/ 25044469 25045599 25045119 25040581 25045640 + gene protein_coding_gene TRUE TRUE AT5G62310.1 IRE (INCOMPLETE ROOT HAIR ELONGATION); kinase Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. similar to kinase [Arabidopsis thaliana] (TAIR:AT1G48490.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G45160.2); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G17850.1); similar to protein kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98518.1); similar to nodule-specific IRE-like protein [Medicago truncatula] (GB:AAX11214.1); similar to putative protein kinase [Oryza sativa] (GB:AAK18843.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0642289324083783 -0.764956148631099 0.461018817383918 1 0.334277287080899 1.92122379846296 -0.0642289324083783 0.0446889220752151 AT5G45760_at 5.6640936619024 5.89744148664704 6.74970249103158 6.10430924692833 7.67270102228434 7.0725834892621 5.83510876190221 5.62955779447612 5.64737413255156 5.32891630949045 6.66170757807563 6.93593699101531 6.70789308399795 6.6560360141782 6.00478326493701 7.02529800594399 6.79403078276186 6.19447873223946 5.49166464142759 0.223113812575988 0.216827684771192 0.209864771700435 0.215047877436300 0.217341848512657 0.215406195048268 0.212876092835956 0.224197405823426 0.224815170652162 0.213316173647465 0.218173287550388 0.209289100689940 0.209699271674862 0.218020860517572 0.224197970740069 0.21021505365034 0.217133500225194 0.223958232762195 0.215408814269425 5 5 + 18579507 18580141 18579822.636 18578338 18580422 + gene protein_coding_gene TRUE TRUE AT5G45760.1|AT5G45760.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative G-protein beta [Gossypium hirsutum] (GB:AAT64014.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.097267592217197 0.764608447811156 0.461217241539109 1 0.334021864004507 12.3841067032044 0.097267592217197 0.161727513697514 AT5G16900_at 1.42066039696027 1.30188184612965 1.74105166622222 1.21860538296961 1.21791555570325 1.65966189134492 1.10151108223294 1.33109203232434 1.79635952919318 1.05419008287764 1.59990092917137 1.40763639017798 1.79818491909485 1.29283526251453 1.98406568604631 1.62671528705339 1.47925156651443 1.88519615229810 1.45283056062435 0.217739687767972 0.213065800699183 0.217833443330122 0.226023969228204 0.211509358613530 0.214950210988644 0.214173543346731 0.219075498302054 0.22390372109946 0.22048316005319 0.227463188809945 0.216738619834651 0.217445741988123 0.222150361324219 0.220191958322074 0.20995071664212 0.210761021060433 0.221126371743010 0.228188084052014 5 5 + 5558898 5559595 5559336.091 5555257 5559718 + gene protein_coding_gene TRUE TRUE AT5G16900.1 leucine-rich repeat protein kinase, putative similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G21340.1); similar to MEE39 (maternal effect embryo arrest 39), kinase [Arabidopsis thaliana] (TAIR:AT3G46330.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G07560.1); similar to Protein kinase [Medicago truncatula] (GB:ABE90329.1); similar to leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris] (GB:AAG00510.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.08485566658251 0.763537684171419 0.461828643258709 1 0.333235922220322 2.90838914757287 0.08485566658251 0.126567418199454 AT5G55090_at 0.291833666512461 0.802721222642728 0.713922638100805 0.496119547735474 0.043740064017898 0.757357132371276 -0.0919593875990396 0.394775452600823 0.626774303025313 1.01085398019703 0.488770728793225 0.525137592497143 0.682376144942537 0.105289144199086 0.717955014247627 0.504566652467169 0.724994015717274 0.273671998618281 0.6554051826396 0.201075017863409 0.205229123227572 0.196632698219093 0.199848852957826 0.197000013561550 0.201507064504808 0.202167985959309 0.200930287114971 0.197891096727782 0.200323261452149 0.201623802837219 0.203028948771504 0.203892010577603 0.204598140015342 0.203190285827744 0.197980214613572 0.205100065051292 0.199448535518131 0.195339876936031 5 5 - 22374111 22374649 22374426.818 22374078 22375424 - gene protein_coding_gene TRUE TRUE AT5G55090.1 MAPKKK15 (Mitogen-activated protein kinase kinase kinase 15); kinase member of MEKK subfamily similar to MAPKKK16 (Mitogen-activated protein kinase kinase kinase 16), kinase [Arabidopsis thaliana] (TAIR:AT4G26890.1); similar to Os02g0322400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046691.1); similar to protein kinase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD15943.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.102728877234061 -0.760751099765908 0.463422202857753 1 0.331195151354689 1.05965861707577 -0.102728877234061 0.177716642073599 AT5G60640_at 10.0948627359254 10.1945115479639 10.7437319185097 10.7540796692938 10.8701707266698 10.5232767294845 9.953371264388 9.95982758020126 10.1247323007678 10.1333530019379 10.6965840918550 10.7034026079068 10.5125661530766 10.5049568987249 10.6597695110762 10.5483005807831 10.2511081777018 10.7892074994941 10.1127208453023 0.0756008931196601 0.0755025515787082 0.0780274796546887 0.0749586894187312 0.0754257464835953 0.0787806177951362 0.0774373850410547 0.0762126785316887 0.076822846496793 0.0753480956661882 0.0742393200007518 0.0741095035203875 0.0773814790564115 0.0779817306476873 0.07498974005252 0.0737551645374543 0.0805503587067193 0.0760242427376947 0.0740595181157703 5 5|0 -|/ 24388399 24389196 24388711 24388185 24391264 - gene protein_coding_gene TRUE TRUE AT5G60640.1|AT5G60640.2 ATPDIL1-4 (PDI-LIKE 1-4); thiol-disulfide exchange intermediate Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. similar to ATPDIL1-3 (PDI-LIKE 1-3), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G54960.1); similar to protein disulphide isomerase [Elaeis guineensis] (GB:AAO26314.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792)|similar to ATPDIL1-3 (PDI-LIKE 1-3), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT3G54960.1); similar to protein disulphide isomerase [Elaeis guineensis] (GB:AAO26314.1); similar to Os02g0100100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045579.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792) -0.0670565118074185 -0.760656887021212 0.463476141505750 1 0.331126269969363 20.7401485162612 -0.0670565118074185 0.0624950424349841 AT5G20400_at 6.36132216244062 6.86696393266204 5.3521709383507 5.50534670193993 7.08689958667521 7.20288412472961 1.69046910937931 1.63553973004331 3.66195061984716 2.55691666362231 2.42404516381315 2.52998133452447 2.67399423465946 2.81150981730488 2.15279569382453 1.63510540959857 2.93495918762813 3.14150544592087 2.93445174503512 0.275171758362902 0.2782820264516 0.265412984531667 0.27767685675139 0.28550694471745 0.277479091259526 0.269506118411135 0.269014317695425 0.270124910624792 0.273192492904969 0.263136141528527 0.262227327092744 0.264586660314046 0.261810317327365 0.269901214915005 0.263166490264136 0.272907960152637 0.261279523548927 0.262251399634007 5 5 + 6895417 6896155 6895842.182 6894846 6896351 + gene protein_coding_gene TRUE TRUE AT5G20400.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G49390.1); similar to ethylene-forming-enzyme-like dioxygenase [Prunus armeniaca] (GB:AAB88878.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.0745519040049727 0.759244239596131 0.464285390865708 1 0.330094355963299 8.00724622514965 0.0745519040049727 0.0940892436710958 AT5G21050_at 1.58652844274494 1.39726321980946 1.58508278666149 1.49735959146166 1.58400501548073 1.62320155324053 1.47424337149084 1.3107440735559 2.07628369662470 1.81573736505212 1.89969330618629 1.51588080112081 1.75926159622897 1.33780971099021 2.03394325469566 1.79084143514495 2.28559244597369 1.93293796009359 1.60516697576378 0.196815264279324 0.191351364236280 0.201012150814372 0.198368892772241 0.195632039914399 0.191093358241030 0.195192629137827 0.203745177098189 0.202942500154029 0.196229403494833 0.19206181028774 0.195064108389657 0.198368114527214 0.191093358241030 0.191093358241030 0.199821893497185 0.203900764455892 0.193079316123508 0.196001613109709 5 5 + 7148434 7148928 7148671.091 7147892 7148959 + gene protein_coding_gene TRUE TRUE AT5G21050.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64090.1); similar to Os03g0722000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051107.1); similar to Os11g0169600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065852.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA91611.2) -0.0638756385001958 -0.757652608514735 0.465198252752258 1 0.328933740960724 3.33324904494793 -0.0638756385001958 0.0463660799694121 AT5G15480_at 1.52979742621985 1.76776161385912 1.88640493860378 2.37460483839131 1.34933869504505 1.80224912701004 1.27741526795983 1.48757533783855 1.89691473411212 1.60537131016811 0.993899706511414 1.35854280368783 1.67494240662086 1.67648469125782 1.41536648435055 1.48465744277062 0.890681528959995 1.97516724141297 1.61071020230564 0.191889922293597 0.188827022576341 0.192716391620588 0.199993065919057 0.18805095732305 0.193457056984207 0.18805095732305 0.192054808271727 0.196370507584144 0.198848488245483 0.196036568297155 0.18805095732305 0.195402521649481 0.196647421764746 0.190862780970381 0.18805095732305 0.207446744445157 0.202151097677603 0.193512516593596 5 5 - 5025960 5026482 5026214.182 5025955 5027163 - gene protein_coding_gene TRUE TRUE AT5G15480.1 zinc finger (C2H2 type) family protein similar to nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G01030.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.0845246397193917 -0.75731872098218 0.46538989527967 1 0.328690545550557 3.25341834081184 -0.0845246397193917 0.127669453649207 AT5G63390_at 2.01674829691294 1.85912453007201 2.27737470885969 2.07689099808285 1.6625209946217 2.17756062029771 1.81809880942732 1.57317315654475 1.86634693516726 2.12120471779452 1.78896608017163 2.18413801050876 1.73209144985795 2.16956784602820 1.87920047783441 2.00923145782991 1.98386841597211 1.40648325386410 1.91100569282435 0.225423265995113 0.21569272393751 0.215024137017263 0.216008694838482 0.215945635287489 0.225730512172953 0.225099083770108 0.21298168952057 0.230336635515714 0.213098084367750 0.220049558697569 0.218721401278447 0.21298168952057 0.216677271387194 0.214960344645794 0.216061624059139 0.232763974216547 0.233154006313504 0.222897908897376 5 5 - 25407771 25408476 25408077.364 25407738 25409817 - gene protein_coding_gene TRUE TRUE AT5G63390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44500.1); similar to Plant protein family, putative [Medicago truncatula] (GB:ABE79402.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) -0.0782865475042013 -0.75633967352093 0.465952132446993 1 0.327977981461175 3.86287609232092 -0.0782865475042013 0.108113241877402 AT5G61220_at 6.79838165389478 7.21263546720735 8.38656493882938 8.44739929201286 8.43903187938137 8.10959485008299 8.04312807544837 7.60050751681358 5.62774201638751 6.63852910184998 7.4664180448302 7.33461978600163 7.37692680250565 7.08343317653702 7.76617132128409 7.52813074455391 8.05893482251818 7.43444781030693 6.57954732093445 0.207554406147981 0.20029898815627 0.200694481703358 0.20029898815627 0.20029898815627 0.202164084690348 0.20029898815627 0.207992619477338 0.224637571331325 0.202079889577262 0.20029898815627 0.203618158141217 0.20029898815627 0.209776868084910 0.200865761230886 0.201551404466069 0.203474866359294 0.210833460347415 0.205070584197201 5 5 - 24643304 24643508 24643403.727 24642799 24644149 - gene protein_coding_gene TRUE TRUE AT5G61220.1 complex 1 family protein / LVR family protein similar to Os10g0406600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064565.1); similar to hypothetical protein MtrDRAFT_AC149131g15v1 [Medicago truncatula] (GB:ABD32562.1); similar to Os08g0239000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061327.1); contains InterPro domain Complex 1 LYR protein; (InterPro:IPR008011) 0.0817846752853457 0.755244808998016 0.46658139206026 1 0.327182095754885 14.7736928558544 0.0817846752853457 0.119864405695598 AT5G57530_at 1.04882799730498 0.832596259741126 1.44173827996669 1.03781663691011 0.97292930762351 0.95992890892084 0.659661846024173 1.05652763046023 0.98293989464987 1.12478716998991 0.891475404834653 0.89923244756039 1.13362863098876 1.00155487999336 1.16901032260606 0.875491959754694 1.30127933260527 1.19502380350026 0.816572799357646 0.177834437125249 0.178458461247835 0.179961182973658 0.183189252477895 0.181233261389264 0.176648154785839 0.180555228480056 0.181150037952221 0.185996303948284 0.178145970252525 0.177219384253847 0.178381836255415 0.177542430014962 0.178176940360913 0.178539270981785 0.176648154785839 0.17946810443629 0.178507393221965 0.180409214379842 5 0|5 /|- 23317697 23318350 23318006 23317547 23318831 - gene protein_coding_gene TRUE TRUE AT5G57530.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) (XTH12) [Arabidopsis Thaliana] (GB:Q9FKL9); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G57540.1); similar to syringolide-induced protein 19-1-5 [Glycine max] (GB:BAB86890.1); contains InterPro domain Beta-glucanase; (InterPro:IPR008264); contains InterPro domain Glycoside hydrolase, family 16, active site; (InterPro:IPR008263); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Glycoside hydrolase, family 16; (InterPro:IPR000757); contains InterPro domain Xyloglucan endo-transglycosylase, C-terminal; (InterPro:IPR010713) 0.07720745737016 0.755030408018748 0.466704679631163 1 0.327026362223561 2.01780521790041 0.07720745737016 0.104920278164711 AT5G17280_at 7.47021165412314 7.3415758729444 8.38766409777284 8.62049102402734 8.82647329254764 8.30660673079156 7.68669732288712 7.54438988072865 7.83037565103878 7.2409709150365 8.40040709766257 8.13708157176611 8.11558257120111 8.72407540308908 8.22203033365486 8.68528926636504 8.19329276768966 8.3043819094784 7.02780464332356 0.145157919916583 0.141047760729873 0.148304631377004 0.136974658651401 0.144170448953082 0.145935250578950 0.140221530220101 0.143370716025243 0.147994709148648 0.146446814249093 0.141990813001217 0.139411336635110 0.147490433110266 0.137370758452494 0.146362049774900 0.136434109025670 0.147967292963008 0.136225181066533 0.149143190175038 5 5 + 5686372 5686680 5686527.636 5686301 5686890 + gene protein_coding_gene TRUE TRUE AT5G17280.1 similar to oxidoreductase [Trypanosoma cruzi strain CL Brener] (GB:XP_808855.1); similar to Os09g0530900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063752.1) 0.07689619032535 0.754569336700041 0.466969880928766 1 0.326691589151369 15.8800894102677 0.07689619032535 0.104015526272612 AT5G47950_at 1.94657403147096 2.08720748030044 2.45795606791332 2.19636951194292 1.73418617231279 2.39606400452033 2.08599137869883 2.42605927424859 2.36791244559020 2.14996107935968 2.71391277994612 2.12468389480692 2.48860797248089 2.14370434939844 2.30279832174122 2.22955389083423 2.39391808197131 2.18760208357022 1.91414378448788 0.172370699749373 0.175560773734285 0.177986482584083 0.175728473029865 0.180926566030304 0.175972539813614 0.175472282150671 0.177353321338394 0.182900098408221 0.171897737791844 0.171897737791844 0.172285610967737 0.178473362306902 0.176936888430491 0.17542491712183 0.172629166937052 0.173606052184997 0.176291598519818 0.178979677974062 5 5 - 19434450 19434999 19434673.818 19434257 19435772 - gene protein_coding_gene TRUE TRUE AT5G47950.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G30280.1); similar to Transferase [Medicago truncatula] (GB:ABE84610.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.0876911738962024 -0.752979352082414 0.467885151248734 1 0.325538535405464 4.39985271100415 -0.0876911738962024 0.138652724090973 AT5G17240_at 0.830106548288723 1.1875908406102 1.66452797654921 1.05071673744836 1.19715639053951 1.39498497850259 1.62057640838804 1.02540523698973 0.96814436593021 1.40545197324709 1.28340510067369 1.29958421042777 1.5877977496611 1.33323830648557 1.18461898462085 1.58411008690352 1.08674470062228 1.25536196243217 1.02198746677570 0.208646523992181 0.212493510035407 0.213449087355737 0.211660720053092 0.208622721801029 0.214429948629188 0.214741753970683 0.210405303656883 0.219844257177140 0.220644550101999 0.211826364144214 0.210291416557224 0.208622721801029 0.220400063469027 0.210375224475154 0.208622721801029 0.215339864317253 0.222791948902416 0.208622721801029 5 5 + 5668275 5668624 5668410.455 5666854 5668909 + gene protein_coding_gene TRUE TRUE AT5G17240.1 SET domain-containing protein Identical to Protein SET DOMAIN GROUP 40 (SDG40) [Arabidopsis Thaliana] (GB:Q6NQJ8;GB:Q9FFI7); similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07670.1); similar to hypothetical protein LOC84193 [Bos taurus] (GB:ABG67019.1); similar to Os07g0471100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059607.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214) 0.0965895900919174 0.752841680406938 0.467964455168442 1 0.325438798083099 2.47574259285423 0.0965895900919174 0.163984624333186 AT5G20690_at 0.986243749181673 1.26008801817781 1.20841811683078 1.17995036637528 0.972942211893984 0.854206659327497 0.679552367015158 0.823615438594935 1.78103596545998 1.25587079370847 1.48459819840107 1.63894421432614 1.7584600073078 1.48750790644601 1.14986204880015 1.48020424488734 1.02365821978176 1.10514322438521 1.39940017610574 0.189732238793886 0.193270282104335 0.194044231501551 0.193471043994254 0.189107409688921 0.198553648937788 0.194250989925919 0.19142781475679 0.196342828580390 0.195282050858328 0.194302265883845 0.190463292399235 0.190831016824747 0.194159226739393 0.195000442339211 0.189107409688921 0.205858818154689 0.195814913886362 0.203828082134774 5 5 + 7003841 7004365 7004143.818 7002455 7004553 + gene protein_coding_gene TRUE TRUE AT5G20690.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G42880.1); similar to Sugar transporter superfamily [Medicago truncatula] (GB:ABE78229.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.0653215840663293 -0.751878065141403 0.468519771834988 1 0.324741154337473 2.43053523415797 -0.0653215840663293 0.0575659508537273 AT5G02650_at 3.50203127784081 3.41139344353914 4.05015895087448 3.63429839511989 3.85123962395106 3.67781508658403 3.33552722540018 3.1392040044061 3.31773320037207 2.90418321458617 3.7174453843836 4.28326394851524 3.72328897053625 3.68439458653746 3.90246915918743 3.95904227499964 3.78552466709766 3.68252394881988 3.4214190273088 0.225499427169267 0.232342805363090 0.225478848526435 0.228715974328961 0.226611430622227 0.23056147023036 0.225523809618317 0.230949005138229 0.258017110417063 0.23489655091591 0.228179959196359 0.234664309231873 0.238044632836558 0.225345619356537 0.227614794568771 0.231335085524249 0.233114468945205 0.233783279176606 0.231245133436154 5 5 + 599037 599741 599397.182 598774 599784 + gene protein_coding_gene TRUE TRUE AT5G02650.1 similar to binding [Arabidopsis thaliana] (TAIR:AT1G28260.2) -0.071756885337505 -0.751274734757433 0.468867674755917 1 0.324304757049408 7.10355313343046 -0.071756885337505 0.0864882293468365 AT5G07370_at 8.4504446251313 8.80196468530318 9.57102730604895 9.49055250587775 9.86534616965085 9.1563473371529 9.09032717426881 8.9184990353185 8.61412128972792 8.40022952784765 9.5466392892219 9.24593859160794 9.26122276344451 9.505042478581 9.00149183848336 9.39622344459953 8.61394640926384 9.03939386876143 8.60319482515867 0.138775582910036 0.128763381053394 0.138047277760485 0.131857835850386 0.134803596033783 0.149910142877139 0.131376356556584 0.126739902957419 0.147031853129618 0.138102353574888 0.128701905732529 0.128619522082048 0.137251578129799 0.133782014493829 0.126960699011609 0.126739902957419 0.15548550861676 0.133147008253770 0.133899377102672 5 5 + 2331622 2332076 2331865.636 2330386 2332282 + gene protein_coding_gene TRUE TRUE AT5G07370.1|AT5G07370.2|AT5G07370.3|AT5G07370.4 IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA); inositol or phosphatidylinositol kinase Encodes inositol polyphosphate kinase, which phosphorylates inositol 1,4,5-triphosphate and inositol 1,3,4,5-tetrakisphosphate to generate inositol 1,3,4,5,6-pentakisphosphate similar to ATIPK2BETA (Arabidopsis thaliana inositol hexakisphosphate 2beta), inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT5G61760.1); similar to putative inositol polyphosphate kinase [Thellun (GB:ABL11220.1); contains InterPro domain Inositol polyphosphate kinase; (InterPro:IPR005522) -0.0880982778686024 -0.750141890883788 0.469521357755623 1 0.323486198866994 18.0382732130475 -0.0880982778686024 0.140829371860773 AT5G51430_at 7.67167515711893 8.14668160554973 8.69354895500602 8.57939875077855 8.89187889183753 8.67218432263198 7.47728577659417 7.53312511468984 7.71792029897414 7.43519370829912 8.5259155854105 8.53372875306005 8.33652039237725 8.41850338622078 8.59444742648098 8.5174089029237 8.06312042454344 8.55456864109519 7.32371440994123 0.176338002881904 0.164741540538770 0.178650498918667 0.177894769310453 0.166962798047111 0.192188867452683 0.165608148397455 0.168970720356240 0.171451238622132 0.171793386578832 0.164629976298746 0.165010097574826 0.161621449858468 0.171228009361059 0.169463166805383 0.168033464965561 0.173756950042646 0.167878980240722 0.166918810704227 5 5 - 20904300 20904925 20904610 20904064 20908133 - gene protein_coding_gene TRUE TRUE AT5G51430.1 conserved oligomeric Golgi complex component-related / COG complex component-related similar to oligomeric gol (GB:BAD45448.1); similar to unnamed protein product; contains similarity to unknown protein gb|AAF56975.1 gene_id:MFG13.14 [Medicago truncatula] (GB:ABE92104.1); similar to unnamed protein product; contains similarity to unknown protein gb|AAF56975.1 gene_id:MFG13.14-related [Medicago truncatula] (GB:ABE92095.1); contains domain gb def: Similarity to unknown protein (PTHR21443:SF2); contains domain FAMILY NOT NAMED (PTHR21443) 0.0734040900716415 0.750007489609108 0.469598949428039 1 0.323389157708547 16.1758737358186 0.0734040900716415 0.0932000397026905 AT5G51900_at 1.13886276272423 1.42055448152738 1.78119248790160 1.83008372377840 1.13502009182798 1.19202752652033 1.50629135218671 1.16074989532738 1.48365629091108 1.54397809542564 1.25728452824229 1.50136855704465 1.06565414220532 1.42815880345899 1.02574845402880 1.67410551156940 1.68453037911848 1.48661735933775 1.51143674534591 0.163368971003786 0.163368971003786 0.166739667772407 0.174610874021627 0.167687746705832 0.175287865371221 0.164050137671421 0.167775962695793 0.171858744016895 0.166093315782135 0.167205065940441 0.163368971003786 0.166643306248633 0.163368971003786 0.165218716861282 0.168234731500577 0.166690595555214 0.171770795469601 0.167869126564751 5 5 - 21110975 21111473 21111222.091 21110907 21111680 - gene protein_coding_gene TRUE TRUE AT5G51900.1 cytochrome P450 family similar to CYP96A11 (cytochrome P450, family 96, subfamily A, polypeptide 11), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G39500.1); similar to cytochrome P450-like protein [Gossypium hirsutum] (GB:CAE54308.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0695663861190986 -0.749761228113433 0.46974114061024 1 0.323211390837583 2.84732637894254 -0.0695663861190986 0.0782370399806532 AT5G40200_at 6.75524638782627 6.78312871358775 7.23349592964763 7.25680075516081 7.69181302478308 7.46176051211523 7.1483274319689 6.44537589456244 4.93130795541252 5.16433359451644 6.62574607105016 6.86957584960073 6.74223543877808 6.67247177964526 6.91638232123201 6.88488254495897 7.04458419618935 6.44851008464986 5.33522455394234 0.235593777969716 0.223935309045354 0.224343945889758 0.229659192279429 0.233439723763834 0.231257196920472 0.222679096336321 0.228996139737837 0.257121978795636 0.229968898083336 0.227187093826520 0.223807078093192 0.227802651291542 0.229753927376850 0.235660627670252 0.228066222837612 0.235236988342735 0.230736564331457 0.238673114262240 5 5 + 16089416 16090284 16089732.636 16087558 16090542 + gene protein_coding_gene TRUE TRUE AT5G40200.1 DEGP9 (DEGP PROTEASE 9); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 9 (EC 3.4.21.-) (DEGP9) [Arabidopsis Thaliana] (GB:Q9FL12); similar to DEGP2 (DEGP PROTEASE 2), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT2G47940.1); similar to Os06g0234100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057235.1); similar to Serine protease (ISS) [Ostreococcus tauri] (GB:CAL53952.1); similar to Os02g0742500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048089.1); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) 0.083714439802718 0.748657699567046 0.470378652151323 1 0.322415434625516 13.0565788663999 0.083714439802718 0.128152273086645 AT5G58470_at 5.95294755820379 5.8336046958462 6.80065922109001 6.36729306507056 6.70066932105169 6.01367451968842 5.57813399806934 5.71936323242205 5.61869714086632 5.54113113447221 6.42683296081124 6.53265341373538 6.81764293800536 6.58508688395471 6.7548918584508 6.93560524662394 6.3661445973934 6.49509934422663 5.11004386426734 0.210670724907576 0.210670724907576 0.231814330817841 0.224010980057622 0.210670724907576 0.214939408313036 0.210670724907576 0.221338165519387 0.216658007770747 0.231127195660623 0.210670724907576 0.214694297771062 0.218610689824919 0.217962911310902 0.224167683073439 0.211132612167502 0.212444106058266 0.223425216516098 0.228624910622018 5 5|0 -|/ 23656646 23657229 23657013.333 23654933 23658146 - gene protein_coding_gene TRUE TRUE AT5G58470.1|AT5G58470.2 zinc finger (Ran-binding) family protein similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G46730.1); similar to Os01g0164400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042101.1); similar to PREDICTED: similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted) isoform 1 [Danio rerio] (GB:XP_684222.1); similar to PREDICTED: similar to fusion (involved in t(12;16) in malignant liposarcoma) (predicted) isoform 3 [Danio rerio] (GB:XP_707398.1); contains InterPro domain Zinc finger, RanBP2-type; (InterPro:IPR001876); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0890395706840746 -0.7484785107755 0.470482221714207 1 0.322286287505494 12.1395608857313 -0.0890395706840746 0.144161546065011 AT5G52690_at 1.15080178251947 1.01386755744454 1.36435659429984 1.81434335751240 1.2000578452847 1.48082348370177 1.07757596996575 1.35991698497166 1.62296111980758 1.48639926171982 0.92862538717451 1.15817931923837 1.56816558640239 1.22784115282785 0.973325727766655 1.00914229426436 1.00865389125312 1.74592314997960 1.37211638227649 0.167100757275697 0.168515471878382 0.170870225009936 0.172286852985323 0.167973620451415 0.179183472682474 0.168270007194548 0.167203433692362 0.172962498905259 0.172914647955197 0.170195904235487 0.167445601862765 0.178786571978873 0.172875301944321 0.167635641402682 0.167100757275697 0.170547053332723 0.168052162916481 0.172406581630712 5 5|0 +|/ 21388110 21388689 21388370.1 21387725 21388725 + gene protein_coding_gene TRUE TRUE AT5G52690.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52680.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.0770154865703884 -0.748225737972884 0.470628346747354 1 0.322104152913205 2.65587177273651 -0.0770154865703884 0.106647856914580 AT5G47150_at 1.54415153472289 1.93994310300765 2.50025880700025 2.36471651297628 1.57462405360448 1.90149538996462 1.82401741483422 1.75972043409214 1.77173378303817 2.45763596397497 1.96562004453338 1.82266418009014 1.92324971024471 1.98161633155681 1.91786810698406 1.56876788416080 1.60057236483066 1.64009069316035 1.64655394245287 0.196568087851774 0.191231560482327 0.192791656022969 0.190805692563378 0.199466647103255 0.196796891996398 0.190881870713539 0.194207312465596 0.197582060857333 0.20033672707408 0.191115297076769 0.193499174615796 0.201144354969566 0.200000460676713 0.192944922511105 0.195276319517489 0.196001703207169 0.191859636211587 0.191743731770796 5 5 + 19168458 19168994 19168676.364 19167272 19169020 + gene protein_coding_gene TRUE TRUE AT5G47150.1 YDG/SRA domain-containing protein similar to YDG/SRA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G47160.1); similar to histone-lysine N-methyltransferase, putative [Brassica oleracea] (GB:ABD65049.1); contains InterPro domain SRA-YDG; (InterPro:IPR003105) -0.0730405068936824 -0.748082316381202 0.470711269886496 1 0.322000835371695 3.80671460340887 -0.0730405068936824 0.0925481151536522 AT5G64700_at 1.73317460467834 1.69879337373975 2.10996629843361 1.79903546373665 2.49498238758238 2.05918664492378 1.98671371914062 1.78203348953774 2.06043232271411 2.28352175157433 2.14147004358705 2.2766214767636 1.75288151087912 2.23565120966789 2.18404988982332 2.62702508681194 2.09314286302205 2.51030144749420 1.77793349149598 0.214696358171660 0.203156920865899 0.203032036517265 0.207563447093575 0.205355661597551 0.204002403440982 0.204943416025289 0.215605312363129 0.219516273800675 0.200611565596927 0.200210768564543 0.203709980589635 0.215971599775748 0.208636563195349 0.199595436402133 0.200105012291468 0.209117167518147 0.212699596166793 0.207053902222446 5 5|0 -|/ 25882512 25883271 25882990.2 25882398 25884153 - gene protein_coding_gene TRUE TRUE AT5G64700.1 nodulin MtN21 family protein similar to integral membrane family protein / nodulin MtN21-related [Arabidopsis thaliana] (TAIR:AT1G43650.1); similar to Protein of unknown function DUF6, transmembrane [Medicago truncatula] (GB:ABE81602.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) 0.0748186688247053 0.747163856834114 0.471242521787901 1 0.321339617658682 4.09212181252208 0.0748186688247053 0.0993629153453 AT5G54880_at 2.63279353853563 2.88892450261264 3.48936318054352 3.70525108378883 4.04572973422372 3.63463103720298 3.18395878440097 3.17716719196989 2.74422741382882 3.38087384291865 3.84167408445886 3.86222768040448 3.51692693285519 3.43536295599323 3.83859450633785 3.67365765805027 3.17815132807101 3.26552001460512 3.16090850613186 0.207253414582816 0.212277470704350 0.211297068444851 0.208358791021083 0.210979828748741 0.216903595475344 0.209651602615886 0.221722588258908 0.214323388233833 0.216802534763317 0.209141429032201 0.209753003347254 0.21252235896255 0.207164519691999 0.216309364998106 0.209702246822102 0.224591348352325 0.213997565672014 0.209902916170605 5 5 + 22309789 22310162 22309958.182 22309112 22310526 + gene protein_coding_gene TRUE TRUE AT5G54880.1 DTW domain-containing protein similar to Os03g0568600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050511.1); similar to DTW domain containing protein [Pseudomonas mendocina ymp] (GB:ZP_01526409.1); contains InterPro domain DTW; (InterPro:IPR005636) 0.072663972308099 0.746330683468731 0.471724770764163 1 0.320740426281401 6.6806528730215 0.072663972308099 0.0917775503933967 AT5G60260_at 1.96748467994829 1.78510834466074 2.20291130473636 1.99313108451737 1.25689004938752 1.94319475571756 1.67532695790799 1.10410962390983 1.91682541088155 1.35389079888461 1.83236818711921 1.24149639962697 1.62447657132996 1.25597017580593 1.7715861324957 1.48586812275178 1.82588825182119 2.32237645174710 1.09316729793799 0.217062138598432 0.219417124496937 0.222851158411235 0.221569922730025 0.225356267587103 0.217726257135368 0.221684826451494 0.223059246197216 0.225710830377604 0.217062138598432 0.217062138598432 0.220548045836806 0.222365786187093 0.223572928963637 0.218059559059062 0.217062138598432 0.220697772526652 0.217083865665799 0.219122951994756 5 5|0 -|/ 24272681 24273477 24272987.667 24272660 24273511 - gene protein_coding_gene TRUE TRUE AT5G60260.1 unknown protein 0.0949082112537598 0.745749627817524 0.472061276132406 1 0.320322903032381 3.30333541134251 0.0949082112537598 0.161838243913997 AT5G49720_at 10.5744176721653 10.5342285612884 10.8333161715751 10.8823060016742 10.9714789340074 11.1221763819890 10.6755580263492 11.0063598210270 11.2427127492227 11.0006315217520 12.12968019425 12.0151833499160 11.8523547466688 11.9032288107385 11.8769936390384 11.8040870057384 11.5194391742037 11.8398782734690 11.1182725209660 0.0688421284785452 0.0676586339316422 0.0673524994364297 0.0699981515409146 0.0689843124694936 0.0723616948735049 0.0673524255985852 0.0702317779054888 0.0717053975576901 0.0711610019611341 0.067692017414548 0.0676678323252878 0.0703167601944795 0.0699952735980851 0.0713617397065192 0.0681782265655599 0.0721033487624085 0.0682317585869144 0.0702100564911236 5 5 - 20214992 20215664 20215313.455 20214617 20217514 - gene protein_coding_gene TRUE TRUE AT5G49720.1 KOR1 (KORRIGAN); hydrolase, hydrolyzing O-glycosyl compounds Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. Identical to Endoglucanase 25 (EC 3.2.1.4) (Endo-1,4-beta glucanase 25) (Protein KORRIGAN) (Cellulase homolog OR16pep) (KOR) [Arabidopsis Thaliana] (GB:Q38890;GB:Q56W54;GB:Q56WU0;GB:Q8H0S4;GB:Q94C24); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT4G24260.1); similar to endo-1,4-beta-glucanase, putative / cellulase, putative [Arabidopsis thaliana] (TAIR:AT1G65610.1); similar to endoglucanase [Cucumis melo] (GB:BAF30815.1); similar to Cel9A [Populus tremula x Populus tremuloides] (GB:AAT75041.1); similar to cellulase; endo-1,4-beta-D-glucanase [Brassica napus] (GB:CAB51903.1); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR008928); contains InterPro domain Glycoside transferase, six-hairpin, subgroup; (InterPro:IPR012343); contains InterPro domain Glycoside hydrolase, family 9; (InterPro:IPR001701) -0.0659656458495503 -0.745173183467434 0.472395260829077 1 0.319908980161738 22.3190524862093 -0.0659656458495503 0.0638556974499555 AT5G04110_at 4.27583501860612 4.49985980040924 5.61526895419556 5.8443816575075 5.9886294200956 5.85640153008928 5.58555691584518 5.54484563782676 4.50352442159671 4.36580163283794 5.50829742026771 5.400128087701 5.91628882606261 5.66377818111947 5.22825917391162 5.93838519824202 5.7563659253966 5.51597830561343 4.41407177276231 0.159549286284801 0.152887213357696 0.154110646561014 0.152445489976314 0.159171321477397 0.161065922105309 0.153396147656328 0.161593328233058 0.165136522100525 0.160248066770410 0.152098343680709 0.154191284900403 0.152676099493739 0.161002978865439 0.156541487477363 0.153770817544367 0.161901321444249 0.153199364565904 0.158406565967751 5 5 - 1110797 1113596 1111980.955 1110447 1114868 - gene protein_coding_gene TRUE TRUE AT5G04110.1 DNA topoisomerase II family protein similar to DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative [Arabidopsis thaliana] (TAIR:AT3G10270.1); similar to DNA gyrase subunit B, chloroplast/mitochondrial precursor (GB:Q5YLB4); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain DNA topoisomerase, type IIA, subunit B; (InterPro:IPR000565); contains InterPro domain DNA topoisomerase, type IIA, subunit B or N-terminal; (InterPro:IPR001241); contains InterPro domain DNA topoisomerase, type IIA, subunit B, region 2; (InterPro:IPR013506); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0652740386405787 0.745115710151542 0.472428568335918 1 0.319867726416499 10.4232145745827 0.0652740386405787 0.0604011244903426 AT5G17260_at 1.17604162942575 1.37230579934813 1.26449037313845 1.28166366092478 0.902399586168538 1.10230180072579 1.03402823810853 1.17134937040701 1.52095564600342 0.481469887532557 1.73842323587542 1.53890075587389 1.49082108054886 1.53147248047484 1.69262811004700 1.26277958735878 1.39182309914955 1.55863234969493 1.54047449302437 0.167586512836440 0.1552822917511 0.161516096929794 0.156036370054297 0.164454735145249 0.158549006534744 0.158060621407499 0.163019041449995 0.158398823271965 0.166009268910488 0.160044400943105 0.166915885027056 0.169001722220202 0.160139122832019 0.17265181056913 0.160108787376646 0.157291328435913 0.164508214017778 0.162919328340809 5 5|0 -|/ 5675405 5676100 5675703.9 5675325 5677914 - gene protein_coding_gene TRUE TRUE AT5G17260.1 ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor similar to ANAC045 (Arabidopsis NAC domain containing protein 45), transcription factor [Arabidopsis thaliana] (TAIR:AT3G03200.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15294.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.0640933300534857 0.745052084654349 0.472465442946022 1 0.319822060013612 2.51639843872988 0.0640933300534857 0.0540730156475224 AT5G61140_at 7.47309672786233 7.37203189125081 8.25697690271275 8.37330954639687 8.8264972991246 8.32127291188478 7.44927003920784 7.38849405594868 7.44867064307968 7.35660607887673 8.2563953452375 8.0400562288957 8.31383457575198 8.06693067150645 8.31099290283526 8.25859307575418 7.80591963044535 8.14031805288873 7.52693956564269 0.177869064782130 0.178597384036088 0.187532908706889 0.173634010685842 0.173158668653064 0.193633924984163 0.182440068653712 0.180383477475782 0.193672071389287 0.185880864000077 0.176557574258297 0.184397951283164 0.18061175861336 0.194812081262069 0.182280375687009 0.176121574854046 0.203508249250194 0.178862730003237 0.178174015702337 5 5|0 +|/ 24619572 24620520 24620021.111 24607225 24620740 + gene protein_coding_gene TRUE TRUE AT5G61140.1 DEAD box RNA helicase, putative Encodes a predicted protein with 30% identity with MER3/RCK. similar to U5 small nuclear ribonucleoprotein helicase, putative [Arabidopsis thaliana] (TAIR:AT2G42270.1); similar to EMB1507 (EMBRYO DEFECTIVE 1507), ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT1G20960.1); similar to PREDICTED: similar to activating signal cointegrator 1 complex subunit 3 isoform a [Rattus norve (GB:XP_001062104.1); similar to PREDICTED: similar to Activating signal cointegrator 1 complex subunit 3 (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) isoform 2 [Canis familiaris] (GB:XP_854167.1); similar to PREDICTED: similar to Activating signal cointegrator 1 complex subunit 3 (ASC-1 complex subunit p200) (Trip4 complex subunit p200) (Helicase, ATP binding 1) [Gallus gallus] (GB:XP_419816.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Sec63; (InterPro:IPR004179) -0.0725311560043373 -0.74432945822151 0.47288437380136 1 0.319303648340342 15.7292197499390 -0.0725311560043373 0.0920111950852698 AT5G64110_at 1.12743970491184 1.10712509932948 1.04690960830768 1.17966200142425 1.43861655869012 1.22900830972106 1.31013193870901 0.99902717314177 1.22592386223499 1.00692935791450 1.17041157455652 1.33939024132549 1.43273524184706 1.07544637257483 1.33945853320799 1.11837548209901 1.60880300856842 1.66645731620053 1.18388784617010 0.202826314806833 0.202826314806833 0.208523507292535 0.207400391543153 0.206206948635979 0.206828568259995 0.208849968552198 0.20563375536799 0.205586326768469 0.214666246688513 0.207200944848659 0.208697254535734 0.213038563673157 0.213171715964340 0.209441397438025 0.204338373838904 0.207251582928388 0.204028354819233 0.204837282184428 5 0|5 /|- 25671949 25672581 25672280.8 25671571 25673256 - gene protein_coding_gene TRUE TRUE AT5G64110.1 peroxidase, putative Identical to Peroxidase 70 precursor (EC 1.11.1.7) (Atperox P70) (ATP45) (PER70) [Arabidopsis Thaliana] (GB:Q9FMI7); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64100.1); similar to peroxidase [Nicotiana tabacum] (GB:BAD97807.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.0669204202340817 0.7439100569084 0.473127622367198 1 0.319002976204284 2.42113925431474 0.0669204202340817 0.0689526040067496 AT5G28920_at 2.1648002644794 2.34697164346743 2.83335610936961 2.3292719222147 2.60814139626352 2.57178712382448 2.87125713489570 2.14944732106948 2.62227387358821 1.94468444640344 2.3657564073385 2.79146192607074 2.39850057121588 2.54834375612352 2.54904889932873 2.79235951160342 2.83817546849041 2.66426102029553 2.76482300656008 0.233983037457814 0.241237462509001 0.240153192107942 0.236011442846093 0.248950111718836 0.249568545527544 0.233983037457814 0.235305864622887 0.241765368984649 0.243953314390332 0.235349857888226 0.239440516983319 0.240050989917465 0.235671289978547 0.239602387645111 0.237307754087502 0.251384555433249 0.236773269109303 0.240802561074588 5 5 - 10940246 10941543 10940640.2 10940039 10943382 - gene protein_coding_gene TRUE TRUE AT5G28920.1 unknown protein -0.0922719470964892 -0.742077106750945 0.474191641434710 1 0.317690696569662 5.0155868914025 -0.0922719470964892 0.155712497779930 AT5G55160_at 9.81301743095805 10.0786193741294 10.5978034438344 10.7274163713735 10.8428109401565 10.6850846436618 9.71480266126865 10.0661280181193 10.0516093247200 9.9813624712972 10.7703891062481 10.6860824803555 10.6726934787680 10.9209975038431 10.3900767411107 10.7633422344520 10.5569125131895 10.5858459354919 10.1220247896985 0.134753032014319 0.121755665668663 0.126273493541517 0.129458736794718 0.126997488743756 0.133936949020040 0.1213424815926 0.124442144069014 0.129587693877627 0.128368788055025 0.124913363389656 0.126045932747419 0.127827373256995 0.125220756796201 0.131180510847103 0.126838666865038 0.128355008854007 0.127612631413023 0.120714301811106 5 5|0 -|/ 22400990 22401949 22401223.3 22400786 22402151 - gene protein_coding_gene TRUE TRUE AT5G55160.1 SUM2 (SMALL UBIQUITIN-LIKE MODIFIER 2) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. similar to SUM1 (SMALL UBIQUITIN-LIKE MODIFIER 1) [Arabidopsis thaliana] (TAIR:AT4G26840.1); similar to ubiquitin-like protein SMT3 [Phaseolus vulgaris] (GB:AAM21576.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) 0.0701321571682372 0.740784825848735 0.474942710206348 1 0.316767242076463 20.6756893743148 0.0701321571682372 0.084007477857252 AT5G50880_at 1.77893323289434 1.86285469152696 2.38227343903383 1.94667084505897 1.76395577290674 2.36794319329454 1.94848001557932 2.17748546324678 2.02624655055783 1.94942625764618 1.94924993439808 1.95171826210177 1.92315694984111 2.05133621366569 2.03532691553843 1.88851986602283 1.92971670945425 2.32819010190235 2.04664791606674 0.144889341544884 0.144430377434791 0.143131993306073 0.144982346793875 0.145434271842406 0.144167608463344 0.143334878077845 0.146820800240570 0.14823356392752 0.149152271093297 0.143842935059071 0.145356187327006 0.157345974306132 0.143373648544243 0.143335816944253 0.141825272808394 0.145372073654029 0.144552384162824 0.143573106431323 5 5 - 20718593 20718834 20718707.273 20718592 20718870 - gene protein_coding_gene TRUE TRUE AT5G50880.1 unknown protein -0.0851677741587283 -0.739978404287734 0.47541177868703 1 0.316191708369746 4.03587063696226 -0.0851677741587283 0.135606492560817 AT5G53090_at 2.42355885709654 2.62931758616389 3.17772775656478 3.02713555973434 2.71518073119115 2.73902036539224 2.97859272895615 2.26116839000831 2.26433245259489 3.01129518449141 3.62481302624899 3.82495303959762 2.59882165642779 3.12100875182998 3.96134012343469 3.45892572304083 3.47032630316505 3.89477892434296 3.21952652367966 0.209471698143954 0.203277776185813 0.200813837788058 0.207695447370173 0.200496009007592 0.203665297958206 0.207415592358758 0.203513521121042 0.218132577203830 0.206752530336908 0.202261283529837 0.204072265381154 0.19963865073426 0.200922846835116 0.209824568523324 0.200992481898096 0.205476309450093 0.203008551273429 0.203934449658100 5 5 + 21541768 21542759 21542365.455 21540605 21542923 + gene protein_coding_gene TRUE TRUE AT5G53090.1 oxidoreductase similar to FEY (FOREVER YOUNG), oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G27760.1); similar to forever young oxidoreductase [Solanum bulbocastanum] (GB:AAL60069.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.083924446611665 0.739927322059565 0.475441501326887 1 0.316155270456787 5.90700724543824 0.083924446611665 0.131826390705405 AT5G53050_at 8.84188210740587 9.08848951068913 9.93717545054092 9.8997441891441 10.0390652994522 9.61963907583567 9.51970382754252 9.46231509605413 9.20222485463065 9.15467512113143 9.83636577971521 9.8634544847485 9.92970895361305 9.97092915923267 9.57071027973821 10.0649901454925 9.7380602567750 9.7514280236639 9.24956044582287 0.113977126410649 0.115460961665379 0.115024259435071 0.113359412145535 0.115953905668319 0.115840258384915 0.117001073117697 0.118958320008777 0.135660597521627 0.121876120724170 0.118775790062646 0.117571871053738 0.117566406647107 0.116853403307826 0.119229353261115 0.112916498922904 0.122442976147903 0.124350191924174 0.112916498922904 5 5 - 21527762 21528922 21528238.6 21527321 21530802 - gene protein_coding_gene TRUE TRUE AT5G53050.1|AT5G53050.2|AT5G53050.3 hydrolase, alpha/beta fold family protein|hydrolase similar to epoxide hydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G02340.1); similar to Os05g0542200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056192.1); similar to putative hydrolase [Solanum commersonii] (GB:CAJ19277.1); similar to Os02g0299300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046616.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089)|similar to epoxide hydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G02340.1); similar to Os05g0542200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056192.1); similar to putative hydrolase [Solanum commersonii] (GB:CAJ19277.1); similar to Os02g0299300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046616.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.0701140541054164 -0.737906103119763 0.476618503255604 1 0.314715303174544 19.0724314992001 -0.0701140541054164 0.085030992263387 AT5G38950_at 1.47241727789588 1.62728134402949 1.83090370145656 2.15631009346615 1.23434698945236 1.18124563697128 1.07848338509285 1.74976916358326 1.21679277098629 1.73241621726539 1.33115538790693 1.20169196481304 1.30893803627351 1.67444253561122 1.17852455413934 1.59481083869498 1.44404105724932 1.79130146691347 1.59682980244533 0.188192631454328 0.185504252481617 0.188214943357664 0.1932479908834 0.185083268279508 0.18595335041808 0.191673037623911 0.18838212470194 0.190714101524963 0.186410954162955 0.186330950939021 0.194563785238566 0.193295199009419 0.194369722359889 0.194916535573152 0.187222504254907 0.190886839798946 0.185794997118881 0.187974873552210 5 5|0 +|/ 15607949 15608252 15608096.5 15607923 15608280 + gene protein_coding_gene TRUE TRUE AT5G38950.1 germin-like protein-related similar to manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G38940.1); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G38930.1); similar to germin-like protein 3 [Vitis vinifera] (GB:AAQ63185.2); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) -0.0837971913172949 -0.737820397717407 0.476668451895923 1 0.314654322377967 3.01932444587643 -0.0837971913172949 0.132170781185209 AT5G54855_at 9.61370601655025 9.53887840913887 10.0299152083238 10.0081675870238 10.3374102714575 10.2799640401408 9.72656035322693 9.6189635246109 8.97086481537106 9.60573234814377 10.2000745624181 10.1680353418261 10.255510996586 10.1866832168844 9.93377083487535 10.0960741983843 10.0516175745121 10.1471621206379 9.69895211545268 0.0913459391900321 0.0913535716913079 0.0952259376292684 0.092272385473041 0.0910310121036087 0.0955341071092471 0.0929532634555555 0.0916731140701756 0.126846979629032 0.0974648541514626 0.0919304682591134 0.091487186928735 0.093585591287946 0.097166191588333 0.091700302539939 0.0903498586594818 0.0923021648289304 0.0976856849522811 0.09576732108211 5 5|0 +|/ 22300157 22301442 22300911.5 22299993 22301613 + gene protein_coding_gene TRUE TRUE AT5G54855.1 pollen Ole e 1 allergen and extensin family protein similar to Os02g0317800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046675.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) -0.0596050312660299 -0.737486149336212 0.476863281441566 1 0.314416559753845 19.6717202756865 -0.0596050312660299 0.0250476984640121 AT5G37360_at 10.5973449295313 10.5460697810097 11.0893909249449 11.1159577411254 11.5652939594172 11.0745628834333 11.5289562256439 11.2229266209214 10.9500958941941 11.0812727113891 11.7691704572599 11.6617822328035 11.6514488565591 11.6900406142598 11.7059035925444 11.6664867503701 11.5559904025223 11.9408089979493 10.8664152862371 0.0825887943830594 0.0775907811428128 0.079134534931184 0.0773757479835897 0.07751379093599 0.082625648600703 0.085284297850399 0.0778976160265489 0.0810823828164655 0.0781169445839291 0.0769899019627443 0.0758775911161831 0.078207610771332 0.0788343489271676 0.0783291289291998 0.0758775911161831 0.0879170412582119 0.0758775911161831 0.0797937649012222 5 5|0 -|/ 14822682 14823789 14823105.556 14822459 14825466 - gene protein_coding_gene TRUE TRUE AT5G37360.1 similar to Os02g0815400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048502.1) -0.0740597776097298 -0.73621241040679 0.477606187511474 1 0.313511388488344 22.4281288592402 -0.0740597776097298 0.100581247107042 AT5G01670_at 4.66093839379885 4.42740040503525 6.10201305777637 5.95521796387144 6.20022435272105 5.65811382179838 4.47236957770977 4.43344495810835 4.69589057055251 4.73093408000938 5.30895837752 4.82295888553099 5.05569187060741 5.07996403698273 4.84401679774903 5.73404753524308 5.25177997231243 4.75330832465936 5.13645321290191 0.211342015436106 0.217043014507350 0.222014836675924 0.214420583377123 0.220914493982361 0.232436058578127 0.212320675918457 0.215659066401707 0.218810123479600 0.227943578060415 0.213632426151956 0.216098426159012 0.212478224792678 0.213277984697484 0.221814166436704 0.212252012539024 0.236703348337227 0.223663862032053 0.231143377784117 5 5|0 +|/ 252783 253801 253215 251811 253957 + gene protein_coding_gene TRUE TRUE AT5G01670.1|AT5G01670.2 aldose reductase, putative similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G37770.2); similar to Aldose reductase (AR) (Aldehyde reductase) (GB:P23901); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) -0.0754304968774135 -0.736097639655015 0.477673163004496 1 0.313429896472003 10.2190986561342 -0.0754304968774135 0.105476462047607 AT5G52630_at 2.84211528883689 2.68475741827943 3.33762524152802 3.28567689015826 3.72160645433387 3.40421962623221 2.49453769302025 2.39441657824255 2.65638247482361 2.53102511662075 2.55584887815038 2.48687149062237 2.90099259049349 2.51954592753407 2.72477941425858 2.67755231435675 2.96710285388992 2.67943235642541 2.70667323566133 0.209845840886584 0.203270386925382 0.203852538310334 0.204211809787844 0.217311369550896 0.207018449154684 0.203352694529401 0.202466387343789 0.202654313883705 0.203589530544532 0.198586610996529 0.205902455197161 0.201827022905284 0.202179879190211 0.201913415705920 0.200561030986765 0.203545145343206 0.200598040701484 0.203615798283801 5 5 + 21368797 21369257 21369048.455 21367601 21369367 + gene protein_coding_gene TRUE TRUE AT5G52630.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT5G04780.1); similar to Os01g0651100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043729.1); similar to PPR986-12 [Physcomitrella patens] (GB:BAD67155.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.065242158669309 0.735903986220518 0.477786184545618 1 0.313292420255688 5.68080740078807 0.065242158669309 0.0643378901836649 AT5G50960_at 8.86594281254215 8.77246654907304 9.56306859809592 9.5870295838755 9.6692900000295 9.41696691584963 8.81885053128083 8.9431117928967 7.74090894458365 8.06334810120454 8.67526718890992 8.6081855623692 8.71594748915984 8.53518526212765 8.65428640685349 8.7457697070614 8.60643423744368 8.7272628474341 7.8134747206858 0.123197472468531 0.126398174066499 0.123789297144505 0.124385855415687 0.12676335620499 0.125024755883327 0.129593097154616 0.124870958528164 0.142595857431195 0.128799275094824 0.123498400593040 0.128008933994299 0.123150319269291 0.130636835035986 0.123262348292619 0.124373379476382 0.135014461200171 0.130086308164647 0.126043069108257 5 5 + 20752456 20753017 20752719.727 20751393 20753281 + gene protein_coding_gene TRUE TRUE AT5G50960.1 nucleotide-binding family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19540.1); similar to H0811E11.6 [Oryza sativa (indica cultivar-group)] (GB:CAC09490.2); similar to OSJNBa0081L15.19 [Oryza sativa (japonica cultivar-group)] (GB:CAE03157.2); contains InterPro domain Mrp; (InterPro:IPR000808) -0.062723685172434 -0.734323934677468 0.478708973216967 1 0.312171938809757 17.470150644536 -0.062723685172434 0.0514585952371279 AT5G66820_at 6.74992314447243 6.94151689286574 7.8324729966055 8.08425588278376 7.55232636571494 8.0829991350061 5.49507385989641 6.04645120792687 5.691754979408 6.25248526146786 6.212978254098 7.00562415857512 6.5244682927097 6.4539826217645 6.53708521027325 7.19643719599746 7.29356885757971 6.6788482565214 6.23106448087757 0.222227318103611 0.233697962967089 0.232728251616449 0.226408260122349 0.231780730636395 0.233684696983915 0.223019986174438 0.222413811540419 0.228788905184002 0.223643562893829 0.234720448457389 0.222633924654956 0.236376257259497 0.230706511088984 0.229301833036185 0.222217643429038 0.228242496730001 0.233161465432538 0.238585136009298 5 5 + 26707749 26708289 26708016.818 26706285 26708340 + gene protein_coding_gene TRUE TRUE AT5G66820.1 similar to Os03g0186500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049202.1) 0.0870433352974578 0.734116619119088 0.478830133381166 1 0.312025082674468 13.4962819422545 0.0870433352974578 0.143304868537862 AT5G45900_at 6.54872943767658 7.02267572176197 7.72352593001316 8.05198640625473 7.83313705791274 7.68711441872885 5.82110527384161 6.03811278876907 6.46957374602612 5.72488476118318 6.52608254050775 6.79948945046687 6.59022659908346 6.96063051454365 6.17281945329134 7.0294117848852 6.52769555536907 6.86504682657134 5.535078438643 0.240170542178736 0.227226588995415 0.241042051609122 0.231297766754596 0.240374766299776 0.22974837780447 0.238171124043471 0.242416816892128 0.239440179944201 0.235935158855862 0.231840944238394 0.225133036855898 0.225133036855898 0.225133036855898 0.233200197628293 0.228268438768964 0.258018699466692 0.234805040849206 0.238069006603453 5 5|0 +|/ 18634837 18635594 18635231.778 18632449 18635787 + gene protein_coding_gene TRUE TRUE AT5G45900.1 APG7 (AUTOPHAGY 7) Component of autophagy conjugation pathway. Required for proper senescence. similar to autophagy protein ATG7 [Nicotiana benthamiana] (GB:AAW80630.1); contains InterPro domain E1-like protein-activating enzyme Gsa7p/Apg7p; (InterPro:IPR006285); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594) 0.0762518729159334 0.732578167868957 0.479729840998098 1 0.310936450889882 13.3876838739735 0.0762518729159334 0.109576026325793 AT5G38610_at 1.79741482782128 2.10427717018071 1.73221306560022 1.90501562412749 1.84006941281870 2.13350427356982 2.22227920956977 2.20720178965342 2.87674254917421 1.74406622627983 2.87897390375098 2.95102164296778 2.35961472637956 3.07138200360252 3.20413091852881 2.57624808107747 2.61803571967146 2.67658673440746 2.28799482589730 0.237340234586176 0.237025634842439 0.233537733617676 0.234475302085086 0.231945603527471 0.23628123685455 0.232579542041013 0.239004335653418 0.234845252367445 0.243210770471763 0.24561658871542 0.23503671189852 0.23475852671453 0.229286987172252 0.248488260687687 0.231380012419939 0.238089623107029 0.235546128286947 0.240847441920029 5 5 - 15478096 15478648 15478377.364 15477921 15478689 - gene protein_coding_gene TRUE TRUE AT5G38610.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT5G46940.1); similar to sts15 [Solanum tuberosum] (GB:CAA56643.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.0682163092137033 -0.732342706655115 0.479867635255742 1 0.310770015524337 4.54021379670869 -0.0682163092137033 0.0793709074749317 AT5G40320_at 0.950862234562023 1.23336766200500 1.23304584164878 1.70926075174455 0.767645621726465 1.10471590149808 0.998293249269214 0.809305862398398 0.560913873154189 1.02863225073390 0.936271667708602 1.28796123744108 1.38084796989657 0.726539179259572 1.19877310307188 1.16154348115097 1.30106596953446 0.693413797347621 1.39451036726734 0.207585137069222 0.197031756454195 0.198366395179318 0.205304027825878 0.203198161622447 0.197031756454195 0.198875848180027 0.208183637768608 0.200480149046773 0.207445447933261 0.207644539102281 0.204723250687563 0.200925000600610 0.197326866026533 0.200112890355141 0.204950306052197 0.201770679174780 0.201166627078240 0.207481408082858 5 5 + 16140203 16140646 16140379.727 16138985 16140769 + gene protein_coding_gene TRUE TRUE AT5G40320.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G22355.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) 0.0783475055204271 0.731971990343759 0.480084632315847 1 0.310508072521755 2.14105591447064 0.0783475055204271 0.116850036047022 AT5G44440_at 1.30197159039254 1.37171767684184 1.02619521510150 1.50536460669348 1.2595319821412 1.17857042254163 1.34478362742516 1.22188974363352 1.27318247586773 1.76185551609838 1.53164485793627 1.41100043896212 1.76489553483731 1.49440143477537 1.36409476903643 1.64486411117697 1.69503876823810 1.96361226599791 1.43200019616021 0.208345446760930 0.209314921359332 0.206472973248661 0.207129103473683 0.206135416794466 0.207703351396661 0.200996923403695 0.217624209886472 0.212405810959695 0.200996923403695 0.214527188726375 0.209334503743794 0.200996923403695 0.202907067916259 0.205914990788528 0.200996923403695 0.210360690085554 0.207454358080663 0.203903615066600 5 5 - 17927956 17928485 17928301.4 17927784 17929539 - gene protein_coding_gene TRUE TRUE AT5G44440.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44410.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20820.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90043.1); similar to CPRD2 [Vigna unguiculata] (GB:BAB33033.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) -0.0701693400163134 -0.73177524474172 0.480199821355019 1 0.310369103106901 2.82510648409411 -0.0701693400163134 0.087580963837097 AT5G05400_at 1.61068260964328 1.63506690550215 1.60258527759958 1.66802961749691 1.34556520896593 1.96333467908848 1.55955993198291 1.30124496934673 1.75143744515429 1.69928081093502 1.58272395152075 1.61881318095928 1.51212211640755 1.90275891644777 1.76671395462431 1.49336626157472 1.50710018937884 1.68879546225050 1.57206127966458 0.210242618030876 0.211223421646553 0.227510523022811 0.210396657335601 0.213976936376798 0.213201529700698 0.21098664638628 0.222532374392945 0.218095455805886 0.217286803074189 0.210242618030876 0.21206659124642 0.217649722074542 0.210992027485461 0.219996460896138 0.210242618030876 0.216104378668985 0.210242618030876 0.210434016038093 5 5 - 1597784 1598280 1598042.909 1597746 1600370 - gene protein_coding_gene TRUE TRUE AT5G05400.1 disease resistance protein (CC-NBS-LRR class), putative Identical to Putative disease resistance protein At5g05400 [Arabidopsis Thaliana] (GB:Q9FLB4); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G63020.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RPS5 (RESISTANT TO P. SYRINGAE 5) [Arabidopsis thaliana] (TAIR:AT1G12220.1); similar to Probable disease resistance protein At1g51480 (GB:Q9C8K0); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain t-snare; (InterPro:IPR010989) -0.0782134815637161 -0.731689124357306 0.480250247864868 1 0.310308283318700 3.23991319965163 -0.0782134815637161 0.116506190341315 AT5G14400_at 1.99658941047915 1.84778037581517 2.41004567042976 2.40969709001256 2.12262015245819 2.10765517141515 2.19510857261195 1.85340264988375 1.70936225684802 2.26662235475753 1.92920638030216 2.24801449958173 1.95221070384903 1.85597993747413 1.95596510955729 2.10844837107528 2.10488044410148 2.30383027672715 1.62228789497219 0.196358767500371 0.189494465716358 0.194461763020589 0.198443524871265 0.192822228092536 0.191651595348786 0.192498471660486 0.197148642667675 0.198581518597224 0.195267794129452 0.192948838109846 0.188971402971760 0.188815149619633 0.198665418203455 0.198025063008160 0.188280374846446 0.197838998363748 0.188280374846446 0.200176366905286 5 5|0 +|/ 4645028 4646298 4645558.1 4643524 4646385 + gene protein_coding_gene TRUE TRUE AT5G14400.1 CYP724A1 (cytochrome P450, family 724, subfamily A, polypeptide 1); oxygen binding member of CYP724A similar to DWF4 (DWARF 4) [Arabidopsis thaliana] (TAIR:AT3G50660.1); similar to cytochrome P450 [Solanum lycopersicum] (GB:BAF41218.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0648624853568853 0.731141154618465 0.480571180932612 1 0.309921447427658 4.07956628706793 0.0648624853568853 0.0645498857029526 AT5G51490_at 1.30812746218291 1.23793970379914 1.53614393630601 1.43130619690862 1.19754073537254 1.26875982108664 0.956070472099218 1.29291709334295 1.41629993466895 2.01588433030817 1.43951952919433 1.41623645047864 1.83789276615550 1.58041501717829 1.35991134683529 1.69678942872863 1.69208404778711 1.78532062270361 1.63164704191266 0.273916616813999 0.268436704451794 0.276963170616314 0.272042975381613 0.276419180686738 0.273469040621021 0.271686660843532 0.268270891597499 0.28905687032779 0.282467916080194 0.269277904128352 0.268270891597499 0.274031333800059 0.268270891597499 0.27634973797313 0.268270891597499 0.27304892379346 0.273750671408314 0.27560728400644 5 5 - 20930939 20931427 20931175.818 20930779 20932832 - gene protein_coding_gene TRUE TRUE AT5G51490.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51500.1); similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G47400.1); similar to Pectinesterase-2 precursor (Pectin methylesterase) (PE) (GB:O04887); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.0646397135130977 -0.731093098139034 0.480599332880591 1 0.309887534644380 2.92308313768522 -0.0646397135130977 0.0634558858944398 AT5G49000_at 4.75336264283326 5.2515753277233 6.06183471005163 6.11370954503438 5.93619071822939 5.91895213188956 4.84706059789635 5.01989653758775 4.36362677328167 4.57983058937497 5.25870810626875 5.42383526609907 5.1732536257722 5.15913328339235 4.88581596001348 5.67299881700621 5.3408134212151 5.32821306140285 4.72729883719872 0.182366667536280 0.181176931239268 0.183919207761585 0.181201439316391 0.180814338440765 0.180250673230844 0.179735814224220 0.180317127455457 0.185205805474656 0.175804792264331 0.180152022227479 0.175388530951056 0.175602748979032 0.186129743345879 0.192159086263378 0.174670299283381 0.187111790934015 0.17431800919181 0.180253568864479 5 5 + 19882364 19882834 19882618.818 19881739 19882981 + gene protein_coding_gene TRUE TRUE AT5G49000.1 similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39550.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.0710982126974395 -0.73032843538273 0.481047418318798 1 0.309348191848461 10.4064553643714 -0.0710982126974395 0.0917477513231357 AT5G54350_at 1.92924998469877 1.77594999786412 2.25777614762846 2.42889021822472 1.76832738862947 2.13924642360916 1.82400945110078 1.59446711108553 1.86569463246373 2.0220562708139 1.75349507755632 1.85635665964009 1.78706070603849 1.67842280333037 1.97944095720990 1.71598236581953 1.92645119368378 1.84029162435850 2.12849533199361 0.194441298451557 0.195042804518938 0.193320955837696 0.196264689686241 0.191472284384373 0.190255565749106 0.195188823780692 0.204323902921790 0.193234463507909 0.197734545445446 0.190255565749106 0.192371404903006 0.204831074356022 0.201483733719745 0.195647728550212 0.199602500174595 0.197243500015658 0.199597781124766 0.192458326944586 5 5 + 22087680 22088262 22087942.636 22087361 22088452 + gene protein_coding_gene TRUE TRUE AT5G54350.1 similar to zinc finger (C2H2 type) family protein-related [Arabidopsis thaliana] (TAIR:AT5G54360.1) -0.0694492185719028 -0.73016629417738 0.481142465113067 1 0.309233893162085 3.87604113296098 -0.0694492185719028 0.0853163928618673 AT5G25160_at 1.11336152125127 0.858150281402742 1.43418393757705 1.05534835187413 1.37363422255452 1.24138077937963 1.42397133750717 1.21822560512129 1.24803071264777 1.15026818808254 1.29664224454921 1.57287713791860 1.20490542657475 1.56498977047492 1.32890243685412 1.3282468965921 1.56035934087545 1.26873252378200 1.22191845590743 0.226669505908326 0.23491672442921 0.227284603957098 0.230671545069395 0.228715819667508 0.229827236159765 0.229049632886966 0.226669505908326 0.235797443773134 0.227526127438454 0.228992775740763 0.236085799557268 0.230621656001094 0.226669505908326 0.226669505908326 0.232106902766085 0.231581530314138 0.230963359991094 0.237936263606126 5 5 + 8687701 8688201 8687948.091 8687460 8688418 + gene protein_coding_gene TRUE TRUE AT5G25160.1 ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding Encodes a zinc finger protein containing only a single zinc finger. Identical to Zinc finger protein 3 (ZFP3) [Arabidopsis Thaliana] (GB:Q39262); similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G10970.1); similar to zinc finger protein (GB:AAA87300.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.0705422382739131 0.730135386718803 0.481160584323464 1 0.309212108057832 2.51350505012442 0.0705422382739131 0.089666943956959 AT5G11870_at 1.72104966189353 2.27167630511597 2.46979640965287 2.80943280622638 1.30919972560236 1.90594800578563 1.68677951441877 1.82795623403641 2.59544289453718 2.13229793682295 1.75942040906344 2.15141063212027 2.10226548449010 1.82982137882706 2.00127910739830 2.06909370581887 2.58589422099175 2.40288777532261 1.80386285569828 0.220453425215671 0.226959820581688 0.216804182145362 0.226834287737871 0.225779020128834 0.222797212931466 0.226419367459769 0.218764608012234 0.215463302967097 0.212999951233220 0.219307695107077 0.213625409372974 0.222820811882576 0.226896053690965 0.213887144478295 0.216413514396239 0.226703942556339 0.218149267997288 0.214282816625825 5 5|0 +|/ 3826180 3826969 3826691.556 3825533 3827307 + gene protein_coding_gene TRUE TRUE AT5G11870.1 similar to SAG18 (Senescence associated gene 18) [Arabidopsis thaliana] (TAIR:AT1G71190.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73218.1) -0.0901726010693584 -0.729219219346327 0.48169787240735 1 0.308566723739217 4.14520999197825 -0.0901726010693584 0.154259762310326 AT5G36280_at 0.280757541603765 1.10882262680956 1.17963712118354 1.27216555018064 1.02117211672318 0.721743341852105 0.540254386318726 0.822710466183716 1.22305457030851 2.14480785636632 0.953057330366401 1.29109349574395 1.75159269250425 1.30881824605642 0.896859582157496 1.41699123214304 1.01808486403303 1.76578408633722 1.70509687618351 0.211703244983572 0.202211730788335 0.212144935010510 0.204850723670197 0.209417537909540 0.218430693416083 0.213856638923949 0.202211730788335 0.204445473873568 0.208208805830879 0.202808877074089 0.207822865074004 0.211679771909356 0.218127741956585 0.204242744818327 0.207829348130503 0.213798393067314 0.202211730788335 0.203519615722094 5 5 - 14316469 14316664 14316571.909 14316465 14316692 - gene protein_coding_gene TRUE TRUE AT5G36280.1 similar to acyl carrier family protein / ACP family protein [Arabidopsis thaliana] (TAIR:AT1G65290.1); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T30G6 (PTHR20863:SF4); contains domain ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED (PTHR20863) -0.0924364533919129 -0.729105360375772 0.481764671361545 1 0.308486567795257 2.36404370658382 -0.0924364533919129 0.160828435726691 AT5G44060_at 5.5921520241014 6.154645826988 6.23341069542108 6.6863928101443 7.42175547064698 6.7992487421254 5.99857799114272 6.82074939145387 5.47114527484082 5.29618976735066 7.0884244856962 6.71564308725404 7.16135281010103 6.96644152765864 5.96699432653335 6.71346319853206 6.28868146545975 6.39561590680812 5.56982816316001 0.210609625221154 0.202062782239669 0.218569173531155 0.208317778881089 0.211999292916149 0.208784757994677 0.214341039190165 0.208360010041588 0.220890619972031 0.212210533176236 0.204498026120263 0.212942654153036 0.204896394361298 0.206305102574763 0.20775340762404 0.205605684416533 0.230745456564506 0.211815095065421 0.208725916608671 5 5 + 17748505 17748864 17748664.545 17748232 17749132 + gene protein_coding_gene TRUE TRUE AT5G44060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04000.1); similar to Os02g0621600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047462.1); similar to Os04g0512500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053299.1) -0.113386812925322 -0.728269299185404 0.482255350019282 1 0.307898330429836 12.5172657037309 -0.113386812925322 0.217875238456826 AT5G11380_at 3.76925466118069 4.06806706041137 4.59759631979998 4.80882735840127 5.04665333322157 4.90925774124192 4.15268531496554 4.65440094416334 4.26109509149953 4.26990046146561 4.87018417125936 5.71771529192059 5.30103214710522 5.26135485325371 4.99720384703484 5.43390132773922 5.01258200523453 5.1317151892044 4.38985865253014 0.22037186064846 0.223644787638889 0.220560297278431 0.215155343075746 0.222962849824214 0.233951996319355 0.224025915470818 0.215661967116962 0.225455892968568 0.220913191739445 0.218551773769106 0.214906445925626 0.214906445925626 0.228628829343383 0.228317793555828 0.214955320007855 0.234362810910706 0.221244511780509 0.218407049368939 5 5 + 3632509 3633216 3632870.909 3629999 3633442 + gene protein_coding_gene TRUE TRUE AT5G11380.1|AT5G11380.2 DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3); 1-deoxy-D-xylulose-5-phosphate synthase|DXPS3 (1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3) Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula] (GB:CAD22530.1); similar to Deoxyxylulose-5-phosphate synthase [Medicago truncatula] (GB:ABE78977.1); similar to 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var. lobata] (GB:AAQ84169.1); contains InterPro domain Transketolase, C-terminal; (InterPro:IPR005476); contains InterPro domain Deoxyxylulose-5-phosphate synthase; (InterPro:IPR005477); contains InterPro domain Transketolase, C-terminal-like; (InterPro:IPR009014); contains InterPro domain Transketolase, central region; (InterPro:IPR005475)|similar to CLA1 (CLOROPLASTOS ALTERADOS 1) [Arabidopsis thaliana] (TAIR:AT4G15560.1); similar to Deoxyxylulose-5-phosphate synthase [Medicago truncatula] (GB:ABE78977.1); contains InterPro domain Transketolase, central region; (InterPro:IPR005475) -0.0758900677605796 -0.727743212670052 0.482564266313108 1 0.307528496083954 9.26217409463608 -0.0758900677605796 0.110063789661107 AT5G12290_at 6.68560215457027 6.83583481768679 7.66898820746853 7.71769736970766 7.79076786237875 7.74506768725224 6.31029303527455 5.9067904507001 5.32447879863864 4.932218849554 6.04380844371798 6.44128482758514 5.9985145841397 5.83530478935789 5.76458134114071 6.04421225385567 6.49573943975468 5.42874399450917 4.98169283968487 0.235366432755477 0.238443436059927 0.245216218047912 0.237968149748554 0.260072486580441 0.243257223459338 0.245056161826094 0.235395057779873 0.247673096707956 0.244591264576804 0.235366432755477 0.235366432755477 0.25506384465922 0.255298593524615 0.242701432904161 0.240174501900474 0.251012437342949 0.248728054572401 0.241922427986235 5 5|0 -|/ 3974684 3975770 3975323.2 3974137 3978161 - gene protein_coding_gene TRUE TRUE AT5G12290.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96236.1) 0.0668419678837853 0.727388259461352 0.482772763348392 1 0.307279102536417 12.6256238007383 0.0668419678837853 0.0754020592867271 AT5G59960_at 7.76989028832872 8.26891553857848 8.18092974117718 8.50198489491299 9.41435746971953 8.35634068068133 8.31875468798692 8.07935556404002 6.89683071353336 7.66447899897212 8.37303280569562 8.52464626010944 8.78672868075781 8.59620706234503 7.68966212179213 8.63579355945275 8.64547150120502 8.71403419826764 7.76468242146263 0.214490464266079 0.203095021967567 0.215771565695420 0.206878690482785 0.210676259521908 0.226348303821879 0.212413615112873 0.202796729981437 0.241322401890516 0.203781529546218 0.212178229072344 0.209971210284826 0.203302515678034 0.226853727350286 0.212988645539738 0.200731882031999 0.210834361066219 0.208197848529975 0.209338294323156 5 0|5 /|- 24159600 24160555 24159933 24159240 24162559 - gene protein_coding_gene TRUE TRUE AT5G59960.1 similar to Os01g0151600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042041.1); similar to similar to Dictyostelium discoideum (Slime mold). MkpA protein (GB:AAL92603.1) -0.111636359137282 -0.72663629544445 0.48321464712779 1 0.306751126206391 16.3301633090244 -0.111636359137282 0.213973822285704 AT5G37560_at 1.021140790755 0.90547895059272 1.12138704678068 1.01942205643502 1.06920473224485 1.15654461637806 1.01495916109529 0.947654978426517 1.27062891560493 1.14613051403837 1.1657773179214 1.21511723251507 1.25489136364428 1.03779561372161 1.53637390014952 0.703017328548342 1.12317597079016 1.75756475489396 1.51970125493285 0.189078616479731 0.186129122551555 0.193335851675513 0.187669975418647 0.185201418971657 0.190525765075613 0.187412919792090 0.187305077657636 0.193257232672937 0.192898268703773 0.190891496298522 0.184421243730204 0.187345969008691 0.190496806736078 0.204170064762354 0.184421243730204 0.190346739029703 0.184630020679632 0.194992256875030 5 5 + 14940288 14940974 14940524.9 14939216 14941020 + gene protein_coding_gene TRUE TRUE AT5G37560.1 zinc ion binding similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G21420.1); similar to Zinc finger, RING-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85921.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) -0.0594839482917845 -0.726613727590659 0.483227912782735 1 0.306735288223026 2.30015791498773 -0.0594839482917845 0.032804075595005 AT5G11250_at 5.73251186933078 6.32127282766345 5.78150233910046 6.66085084285371 6.40057073984302 6.25973718583337 4.49295100041904 4.600551271465 5.06315037906877 4.58929072038457 5.66785203338898 5.91423281406073 5.76889398148742 6.34768587213988 5.61425066747822 6.03487663922761 5.86440779836681 6.26638910601628 4.57632778122832 0.213100199266136 0.223875557528202 0.214363148827809 0.209386541107108 0.211644657609574 0.219760775290919 0.204163873027998 0.207809128315683 0.215618401955015 0.203665625986833 0.205482689330675 0.211806432984886 0.208182819652009 0.206829240690477 0.212264560626831 0.205063558012325 0.221223914670138 0.207833475565598 0.210666074527209 5 5 - 3588050 3588551 3588303.909 3587979 3591961 - gene protein_coding_gene TRUE TRUE AT5G11250.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G25510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to TIR; Disease resistance protein; AAA ATPase [Medicago truncatula] (GB:ABD28703.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) 0.100955702728134 0.726139257988881 0.483506864200741 1 0.306402410595479 11.1201167966876 0.100955702728134 0.185685732221204 AT5G07930_at 0.714620463455076 0.663373613310232 0.933114903185088 0.94041260091686 1.11387569458483 1.26236618046812 0.967977217220407 0.906416280244243 1.02519012202523 0.59347700396774 1.31602660327737 0.75303467485641 1.10978586279459 1.2077165251902 0.623778364754283 0.717173394834525 0.86790473771565 1.07642185294387 1.27362597084179 0.237443580862243 0.234602049221866 0.237371844759933 0.236866095976936 0.237818324087711 0.24041805775167 0.240012862009266 0.234714680583208 0.247326356266605 0.237962016026554 0.233576043336514 0.236903076942383 0.233330836090951 0.236378809787766 0.242801841294512 0.234483417185900 0.239539321703546 0.238395000131913 0.233330836090951 5 5 + 2531124 2532134 2531682.091 2530866 2532217 + gene protein_coding_gene TRUE TRUE AT5G07930.1|AT5G07930.2 MCT2 (mei2 C-Terminal RRM only like 2); nucleic acid binding|MCT2 (mei2 C-Terminal RRM only like 2) a member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only. similar to TEL2 (TERMINAL EAR1-LIKE 2), RNA binding [Arabidopsis thaliana] (TAIR:AT1G67770.1); similar to Protein terminal ear1 (GB:O65001); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA recognition motif 2; (InterPro:IPR007201); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.0589013704961308 0.724045846550356 0.484738824362890 1 0.30493605043662 1.89930859466850 0.0589013704961308 0.0292245570483296 AT5G11180_at 0.768759185874663 1.05692852977850 0.757793837417727 1.15769369242036 1.1234122987209 0.80066209195687 1.22309045603103 0.858068897869791 1.64317759170793 1.53551107843477 1.16880242613045 1.14214145356736 1.27546571756159 1.72944379576960 1.58542679350459 1.03655034558483 1.36326683814625 1.80522961224675 0.94508428711793 0.210832272955060 0.204131677901456 0.206509606909865 0.207809609879404 0.205257365787370 0.211887472397881 0.20455098225749 0.20773732067731 0.210108305046540 0.204131677901456 0.206682821265174 0.204805982787962 0.210483522751124 0.209025465685651 0.210949562520289 0.207626481816506 0.214279172598598 0.205546216721353 0.209319077187782 5 5 - 3557281 3557806 3557503.909 3557262 3561576 - gene protein_coding_gene TRUE TRUE AT5G11180.1 ATGLR2.6 (Arabidopsis thaliana glutamate receptor 2.6) member of Putative ligand-gated ion channel subunit family similar to ATGLR2.5 (Arabidopsis thaliana glutamate receptor 2.5) [Arabidopsis thaliana] (TAIR:AT5G11210.1); similar to ATGLR2.4 (Arabidopsis thaliana glutamate receptor 2.4) [Arabidopsis thaliana] (TAIR:AT4G31710.1); similar to Glutamate receptor 2.6 precursor (Ligand-gated ion channel 2.6) (GB:Q9LFN8); similar to Glutamate receptor 2.5 precursor (Ligand-gated ion channel 2.5) (GB:Q9LFN5); similar to Glutamate receptor 2.4 precursor (Ligand-gated ion channel 2.4) (GB:O81776); contains InterPro domain GPCR, family 3, metabotropic glutamate receptor-like; (InterPro:IPR000337); contains InterPro domain Bacterial extracellular solute-binding protein, family 3; (InterPro:IPR001638); contains InterPro domain Extracellular ligand-binding receptor; (InterPro:IPR001828); contains InterPro domain Solute-binding protein/glutamate receptor; (InterPro:IPR001311); contains InterPro domain Ionotropic glutamate receptor; (InterPro:IPR001320) -0.0784237646166793 -0.723991252055926 0.484770978981421 1 0.304897859831884 2.34974205304247 -0.0784237646166793 0.119941976367812 AT5G16030_at 10.7486372609382 11.0083295676202 11.1139361280756 11.2464156729625 12.109156767411 11.6243066753043 11.2990482199391 11.1830387167889 12.4389864495202 12.1331028481452 13.1107953285631 12.9966149544078 12.8305955452053 12.9880919376051 12.7101581230926 12.8586781425760 12.0215547647581 12.404428985324 12.4271320220815 0.085200599541583 0.0848707083226789 0.089274897542366 0.0913346776050303 0.084898512882818 0.0882826792511983 0.0853718168962986 0.0848721484219979 0.0880219156494985 0.0823971638119363 0.0823971638119363 0.0823971638119363 0.0853330556828726 0.0842704329656362 0.0849510602321756 0.0823971638119363 0.0877361871013514 0.0849515193226311 0.0842785396161317 5 5|0 +|/ 5238883 5240551 5239505.7 5238183 5240751 + gene protein_coding_gene TRUE TRUE AT5G16030.1|AT5G16030.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02500.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96956.1) -0.0726436783361488 -0.72386934590457 0.484842783052816 1 0.304812591899393 23.8282028741002 -0.0726436783361488 0.0999424380803088 AT5G60340_at 2.06555918190701 1.76668488577277 2.36845190362111 2.13070559772373 1.73941649366113 1.53532170947848 1.70244191447573 1.72696569655250 1.81296551419209 2.03872669656950 1.90539091194132 2.18857976222133 2.16967044504535 2.09475425991706 1.74173677096452 2.05175094715757 2.11669291394182 1.92499971544576 1.30617552537129 0.276422546593536 0.265024222270897 0.275031866875905 0.269928691204836 0.267804928376143 0.274197636609631 0.260653036682808 0.263534498475647 0.265441722813609 0.270058600113740 0.270930475126628 0.269524591594775 0.264989092851134 0.263942561292339 0.272928385291574 0.268591749164364 0.262618931431717 0.267626607714134 0.268510358423196 5 5|0 -|/ 24291137 24291753 24291548.5 24291105 24293117 - gene protein_coding_gene TRUE TRUE AT5G60340.1 maoC-like dehydratase domain-containing protein similar to MaoC-like dehydratase [Medicago truncatula] (GB:ABE93831.1); contains InterPro domain MaoC-like dehydratase; (InterPro:IPR002539); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Fatty acid synthase; (InterPro:IPR003965); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.0662114733076155 0.721369018732164 0.486316960541153 1 0.303066571733727 3.75118652850254 0.0662114733076155 0.0750557145189395 AT5G04270_at 3.96962484623627 4.18725092692848 4.69483317147132 4.4395796802566 5.76719566061762 5.23566425174476 4.12374338198441 4.25166750661462 4.73934454288202 4.20014599508803 5.25349051416488 5.518627302231 5.06449065821526 5.62191505500226 4.78561675170812 4.62122302515864 4.25939797651572 5.0000001237997 4.04624193546651 0.249446494584717 0.243929416861391 0.248620751077292 0.248035501191723 0.246090098055525 0.262586835543111 0.243929416861391 0.245797434292656 0.260767725076910 0.247933141800612 0.245837884468070 0.243929416861391 0.246548578773971 0.247471648100214 0.255356632422636 0.244163460115457 0.258312186986247 0.259433103563707 0.250647088006182 5 5|0 -|/ 1182908 1184004 1183522.222 1182719 1184766 - gene protein_coding_gene TRUE TRUE AT5G04270.1 zinc ion binding similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G09320.1); similar to Zinc finger, DHHC-type [Medicago truncatula] (GB:ABE87833.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) -0.0753229190654668 -0.719723299680374 0.487288781691426 1 0.301920303899103 9.25578126172925 -0.0753229190654668 0.110998841898034 AT5G46560_at 5.01485374730958 4.90755471818627 5.63074108999228 5.79772713241459 6.66527021953254 4.60667701352405 5.57275252675065 5.64071120606363 4.31994946276911 4.48207611229013 5.63113361684458 6.08161741731877 5.76202405171683 5.94044393956148 5.72543168401086 6.09499810452159 4.80885762835954 5.38643029012482 4.65063062430375 0.255188845687159 0.266797102549251 0.258960414903821 0.265903841912822 0.258491946752925 0.28733163845535 0.256361345664062 0.258439031860532 0.270749194857677 0.261723890133254 0.255188845687159 0.255188845687159 0.260459053252675 0.26011327374803 0.261983948813555 0.255188845687159 0.279546211890209 0.260107485372999 0.258144552525755 5 5|0 +|/ 18906127 18906755 18906475.222 18905288 18907689 + gene protein_coding_gene TRUE TRUE AT5G46560.1 similar to unnamed protein product; gene_id:F10E10.3 unknown protein [Medicago truncatula] (GB:ABE93064.1); contains domain EGF/Laminin (SSF57196) -0.168381603879774 -0.719475411871992 0.487435267235371 1 0.301747850470239 10.5610788690609 -0.168381603879774 0.35809445980974 AT5G66650_at 2.00930032903302 1.91481216572649 2.07109771663678 2.73447282199735 1.9789911883287 2.110316990818 2.11930288442618 1.97847018176191 1.93019661800828 1.94898691371006 2.22483198109393 2.10528688882837 2.32607973668002 2.59045135384052 2.03555142409483 2.20366447151255 2.51325754388657 2.63212114753423 2.12642840363913 0.224404584881621 0.217164498650927 0.214103999959664 0.220135076843987 0.210722465034422 0.215841012033976 0.214016433904184 0.213733050013673 0.217929711390651 0.219230110617515 0.21355591079702 0.210722465034422 0.219148916229977 0.210722465034422 0.210722465034422 0.216919294517688 0.217607834975557 0.217989769848381 0.213264065128180 5 5|0 -|/ 26620472 26621077 26620773.1 26620229 26621602 - gene protein_coding_gene TRUE TRUE AT5G66650.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G23790.1); similar to Os10g0501500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064986.1); similar to Protein of unknown function DUF607 [Medicago truncatula] (GB:ABE78504.1); similar to Os03g0233000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049472.1); contains InterPro domain Protein of unknown function DUF607; (InterPro:IPR006769) 0.0781421774240675 0.719414355208413 0.48747135193023 1 0.301705382076485 4.27998364161757 0.0781421774240675 0.120652100685133 AT5G10830_at 2.39284076859337 2.10598452529615 2.28254562109737 2.22220326300840 2.53002446789733 2.5195017420659 2.57865328785027 2.37382742644521 2.70757548904039 2.53942588487686 3.19357544292092 3.45707204223407 2.64287516282828 3.15914360165996 2.92729986758116 3.20393398467689 2.80682567345828 3.21028770590722 2.58848009101896 0.170581125865855 0.170621660934897 0.173621364647571 0.166200178633784 0.170701211935339 0.166200178633784 0.170165215797650 0.168036989854934 0.166200178633784 0.167984015717474 0.175006390472303 0.179441701817242 0.170527888027537 0.171185431849168 0.171594002542288 0.166200178633784 0.169733284140604 0.16997542415541 0.166986762861296 5 5 + 3424062 3424527 3424279.545 3423687 3424721 + gene protein_coding_gene TRUE TRUE AT5G10830.1 embryo-abundant protein-related similar to embryo-abundant protein-related [Arabidopsis thaliana] (TAIR:AT4G22530.1); similar to embryo-abundant protein EMB-like [Oryza sativa (japonica cultivar-group)] (GB:BAB89030.1); contains InterPro domain Methyltransferase type 11; (InterPro:IPR013216) -0.0632272415983428 -0.718488167172946 0.488018935004192 1 0.301061563249418 5.2191745578503 -0.0632272415983428 0.0619119998005435 AT5G41000_at 3.01144563545773 3.28398059704553 3.35212608144765 3.03256894209639 3.42398926355111 3.51347230019455 2.90578068993871 2.72426661582581 3.06022111719720 2.65442764171849 3.76762996903487 4.3077287961433 3.77410060758027 3.62251196333795 4.17841351197008 3.34308248150757 3.15312242794085 4.02591996973166 3.15363343075993 0.214565814171463 0.221121185035281 0.226752556238079 0.225252852310731 0.217106793243456 0.221982197951059 0.221081282582425 0.218748470606435 0.239946199239892 0.225922322440328 0.218699515701380 0.214670975913420 0.220582897678018 0.224071440852471 0.222939258922331 0.214723670630652 0.225872436056306 0.21468057569558 0.221742969378862 5 5 + 16440387 16440859 16440610.7 16438008 16441058 + gene protein_coding_gene TRUE TRUE AT5G41000.1 YSL4 (YELLOW STRIPE LIKE 4); oligopeptide transporter Arabidopsis thaliana metal-nicotianamine transporter YSL4 similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL6 (YELLOW STRIPE LIKE 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT3G27020.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91892.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91885.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAE91886.1); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) 0.0670781703644848 0.716862297559373 0.488981105384519 1 0.299933182347508 6.5197826552602 0.0670781703644848 0.080678864448477 AT5G10310_at 1.35593165852067 1.26002030302163 1.27721682240879 1.74583902739239 1.32591789489639 1.57791746075777 1.31470349206439 1.54172727876243 1.47437897239935 1.72882416094961 2.12793435933935 2.13172247187669 2.35067129177067 1.72856021907869 1.93120746932783 2.35309543834292 1.40257450788601 1.80424005809806 1.92745887875762 0.191642909115369 0.185498816729126 0.191652005757774 0.199184509931028 0.189821068912778 0.18224240325847 0.18224240325847 0.188655148987718 0.187846674490022 0.185658590253471 0.182457926726626 0.186072420550262 0.188735373526988 0.188972123683959 0.188415407294827 0.192286119934475 0.199069360554921 0.187825769865952 0.194128663892179 5 5|0 -|/ 3241668 3242099 3241810.2 3241519 3242267 - gene protein_coding_gene TRUE TRUE AT5G10310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37810.1); similar to 80A08_28 [Brassica rapa subsp. pekinensis] (GB:AAZ67613.1) 0.072214293836509 0.715452282607575 0.489816483917201 1 0.298956472314279 3.26939494106167 0.072214293836509 0.101476950000273 AT5G11120_at 0.190137543310088 0.234098425130509 0.353364597758353 0.732876122285286 0.338543946777556 0.481260677130778 0.268354901408313 0.475201931480095 0.889397986705197 0.533091794788597 0.0149162482277353 0.442447634353745 0.635190993236186 0.513090406559726 0.548373450331738 0.150861751358244 -0.136130928055593 0.682250565189751 0.314533002736902 0.205044470416871 0.210752240430870 0.205044470416871 0.209900565464065 0.20726054001461 0.209880012238894 0.208261604453639 0.205044470416871 0.213685321895873 0.207897342361606 0.206279371110591 0.208750869449401 0.213735031447926 0.213411083853116 0.205098304384541 0.215737203869111 0.20837578036408 0.209958001205410 0.211459782350519 5 5|0 +|/ 3542336 3542962 3542642 3542321 3542991 + gene protein_coding_gene TRUE TRUE AT5G11120.1 unknown protein -0.0664782589000032 -0.71426235915685 0.490522151791565 1 0.298133566572338 0.851921073107 -0.0664782589000032 0.0791363888351493 AT5G28620_at 1.84477407711923 1.26775822188899 1.75698786187998 1.87048807498539 1.28824588740330 1.52216965294835 1.54119098062300 1.45380126383863 1.77453619417650 1.62334122697614 1.90814516466755 1.42053923570165 1.62126947830308 1.68225380489715 1.73585961886583 1.82650698969792 1.71667133295584 1.78908218402831 1.71829195886248 0.163570904656177 0.169994399124802 0.166751747545827 0.169925744867781 0.163388870386916 0.165018968506642 0.163489159041698 0.164428565638183 0.168683738816908 0.177492903261806 0.165981472115448 0.169949971387631 0.162735149500488 0.162735149500488 0.170792277487711 0.168680992464061 0.168515768042959 0.173638845896315 0.168109588852345 5 5|0 -|/ 10612545 10612982 10612741.6 10612533 10613008 - gene protein_coding_gene TRUE TRUE AT5G28620.1 protein kinase C-related -0.0744285319024061 -0.712363343196027 0.491649634949537 1 0.296822837121751 3.27714238732488 -0.0744285319024061 0.110563768268795 AT5G56470_at 1.34451224534629 0.991028500992832 1.33750661367138 1.35137138714415 1.34010768877228 1.05274315562824 1.52377521123543 1.26300495012329 1.36882533499732 1.33352878932423 1.35095854068581 0.923683824983183 1.77894105213327 1.49780107921081 1.58729740736161 1.50563664709307 1.17781906640208 1.72445862744789 1.47123443043152 0.201464568043345 0.207284885641301 0.199138031043294 0.2064551513958 0.198690689167018 0.199234233145830 0.206618245741628 0.212697363960272 0.200206202966862 0.201972706782761 0.207467042420234 0.197462557486862 0.198606864080430 0.208498229731202 0.208252791818395 0.197172688370066 0.207686884132578 0.212561563335094 0.199717061143913 5 5 + 22886591 22887157 22886838.909 22886286 22887184 + gene protein_coding_gene TRUE TRUE AT5G56470.1 FAD-dependent oxidoreductase family protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G32300.1); similar to unnamed protein product; gene_id:MCD7.24 pir||T02676 strong similarity to unknown protein [Medicago truncatula] (GB:ABE84753.1); contains domain GULONOLACTONE OXIDASE (PTHR13878); contains domain FAD-linked oxidases, C-terminal domain (SSF55103); contains domain GULONOLACTONE OXIDASE (PTHR13878:SF5) -0.0691150069530341 -0.712238018494881 0.491724098782383 1 0.296736446792548 2.69276657690544 -0.0691150069530341 0.0908697653629702 AT5G55300_at 8.0604784373075 8.12680196790787 8.810853734596 8.89617449432129 9.36666876343459 9.11604046986789 8.41691439054142 7.83968840701128 7.86699701022407 8.3164928943108 9.02679179653328 9.03806734444144 8.613270374156 8.78516470720994 8.85474235535065 9.09958953624258 8.85056310246368 8.5836259142724 8.648890663885 0.141157335261645 0.135589526236908 0.136245380632021 0.141896748146514 0.129453866201670 0.135660916260266 0.132579770536620 0.140190409533826 0.160738235337327 0.129453866201670 0.136713370972003 0.137879557145907 0.129453866201670 0.131488190142693 0.136539910718890 0.134645701062137 0.139728801328245 0.138829155990248 0.132207184133483 5 5|0 -|/ 22442066 22443113 22442466.7 22441803 22446683 - gene protein_coding_gene TRUE TRUE AT5G55300.1 TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I Encodes a DNA topoisomerase I. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Identical to DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) (TOP1) [Arabidopsis Thaliana] (GB:P30181); similar to TOP1alpha (TOPOISOMERASE I) [Arabidopsis thaliana] (TAIR:AT5G55310.1); similar to DNA topoisomerase I [Daucus carota] (GB:CAB46363.1); similar to topoisomerase I [Pisum sativum] (GB:CAA74890.1); similar to topoisomerase I [Nicotiana tabacum] (GB:AAD08711.1); contains InterPro domain DNA topoisomerase I, DNA binding, eukaryotic-type; (InterPro:IPR008336); contains InterPro domain DNA topoisomerase I, C-terminal, eukaryotic-type; (InterPro:IPR013499); contains InterPro domain DNA breaking-rejoining enzyme, catalytic core; (InterPro:IPR011010); contains InterPro domain DNA topoisomerase I, catalytic core, eukaryotic-type; (InterPro:IPR013500); contains InterPro domain DNA topoisomerase I, C-terminal; (InterPro:IPR001631) -0.0743100476156688 -0.711415298004914 0.492213104711074 1 0.296169659597780 17.146171123527 -0.0743100476156688 0.110495480135027 AT5G06140_at 7.24152777349532 7.207549501054 7.93616010228433 8.1106563438714 8.43817504515316 8.04339220778563 7.32096964134857 6.95488122609242 6.86490039285381 6.91025156294597 8.20812011971519 8.11184190043117 7.9160640873314 8.15947118391346 8.02939356607348 8.04208325289573 7.8531938179063 7.76691400419108 6.82984226855988 0.16291609754866 0.165382905133201 0.168547689255577 0.172327856119167 0.163736645511498 0.166636137782837 0.164018119399086 0.169035261517267 0.174661925625658 0.165799186818349 0.166995000970137 0.168803182455494 0.158930407419949 0.163019901067522 0.171362523209206 0.158930407419949 0.164988760235473 0.162398080314361 0.167069627714343 5 5|0 -|/ 1856220 1857304 1856706.444 1856009 1858786 - gene protein_coding_gene TRUE TRUE AT5G06140.1 phox (PX) domain-containing protein Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07120.1); similar to sorting nexin 1 [Brassica oleracea] (GB:CAD29576.1); contains InterPro domain Phox-like; (InterPro:IPR001683) 0.0707991686866356 0.71031732169879 0.492866182146405 1 0.295414164220315 15.0962723049742 0.0707991686866356 0.0981202665338478 AT5G35230_at 1.01714872959095 0.698109176074708 1.45268799107591 1.32437652714218 0.775437649780047 1.17302540590967 0.952914507540362 0.818359811015448 1.48701767217799 1.38580355828312 1.56449327348586 1.44597844020422 1.07453081509168 1.10879023251130 1.03006921746701 1.33666948984895 1.25330297571110 0.967995262614956 1.67182016845971 0.198004903503895 0.194539708876393 0.194775927739638 0.193800299291601 0.192856776542661 0.196406960990805 0.190289129254595 0.194129270639972 0.198458886031985 0.199735525294234 0.206897902347535 0.194662618684063 0.194383740977578 0.19956531697637 0.201990344135462 0.190535866181787 0.198523358509097 0.204077658560683 0.190038387537360 5 5|0 -|/ 13507210 13508376 13507738.667 13507208 13508903 - gene protein_coding_gene TRUE TRUE AT5G35230.1 unknown protein -0.0696546334813919 -0.709859807261379 0.493138469342316 1 0.295099668517429 2.39531206460307 -0.0696546334813919 0.0939020596632498 AT5G14650_at 0.86087769760434 0.698492402600648 0.909238359032454 0.895579330378188 0.90639432674047 1.13917184824770 0.955671121500833 1.41817391960504 1.51429702467408 1.04869037917117 0.823120085397885 1.39936444763411 1.45235797949125 1.30049744057156 1.20574011086524 0.841705068991176 1.36640052235455 0.87593324441829 0.850567281778606 0.237444046382010 0.243677073066338 0.243344473680911 0.247696757257820 0.238595955263053 0.236176019220362 0.235830079707714 0.232686037196548 0.238295522042259 0.247656390015978 0.247113260770869 0.240603291703879 0.236470433715637 0.241991056725364 0.238067030570291 0.236966971629496 0.246449426452649 0.236458181122346 0.237134846176767 5 5 + 4725688 4726284 4726069.818 4724453 4726516 + gene protein_coding_gene TRUE TRUE AT5G14650.1 polygalacturonase, putative / pectinase, putative similar to polygalacturonase, putative / pectinase, putative [Arabidopsis thaliana] (TAIR:AT1G60590.1); similar to polygalacturonase PG1 [Glycine max] (GB:AAD46483.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat; (InterPro:IPR006626) -0.0696615460905083 -0.709838987145829 0.493150862517715 1 0.295085361107154 2.12094558788377 -0.0696615460905083 0.0939369290223081 AT5G56540_at 3.20615010219089 3.70714926703501 4.15796153768132 4.04686770715899 3.42562456421782 4.4886419759268 3.54355706995057 3.3941864646134 4.23718220690762 3.76891814302926 4.65969008992531 5.48884035688832 4.23709978146331 4.52683441677793 4.88939303995045 4.94921162095618 4.69106483840029 4.99101735177658 4.16572255075382 0.224652537684182 0.232675929783909 0.2332561156136 0.238152329271145 0.233071722760959 0.231422732074670 0.223490588091159 0.235393906203718 0.224874210126302 0.231304297706526 0.22771319699781 0.232958357941294 0.224053407546817 0.227945720473960 0.243950725409148 0.227789785723049 0.226758303617439 0.22321396880165 0.23460195627406 5 5 + 22910482 22910624 22910537 22910377 22910868 + gene protein_coding_gene TRUE TRUE AT5G56540.1 AGP14 (ARABINOGALACTAN PROTEIN 14) Encodes arabinogalactan protein (AGP14). Identical to Arabinogalactan peptide 14 precursor (AG-peptide 14) (AGP14) [Arabidopsis Thaliana] (GB:Q9LVC0); similar to AGP13 (ARABINOGALACTAN PROTEIN 13) [Arabidopsis thaliana] (TAIR:AT4G26320.1); similar to unknown [Brassica rapa] (GB:ABB97032.1) -0.105618112290216 -0.706915337000239 0.494893064618617 1 0.293080014888568 8.17697645472061 -0.105618112290216 0.205903024892747 AT5G19660_at 6.02580584806514 5.75801054683588 6.93500127148713 7.1079693081578 7.73544094175544 6.97215160102672 5.55666593371574 5.77192974297303 5.62103124607425 5.9456120002878 6.33538265475006 6.55276335184463 6.61512955629015 6.51881087474503 5.71625873711928 6.57239318997029 6.2071497641024 6.63038385393633 6.08650381267748 0.250446145810095 0.233504256321661 0.247890972115739 0.243029380704157 0.254513459099053 0.242184246471838 0.244958852348365 0.236436171763138 0.251461248449266 0.248174101700359 0.243984859887457 0.242193565016043 0.238725096192127 0.25355077578295 0.252239988974083 0.2436583683891 0.253997410613947 0.233504256321661 0.233504256321661 5 5 - 6642331 6642867 6642608.273 6642006 6646532 - gene protein_coding_gene TRUE TRUE AT5G19660.1 subtilase family protein similar to subtilase [Arabidopsis thaliana] (TAIR:AT1G20160.2); similar to LOC511682 protein [Bos taurus] (GB:AAI23413.1); similar to PREDICTED: similar to Membrane-bound transcription factor site-1 protease precursor (Site-1 protease) (Subtilisin/kexin-isozyme-1) (SKI-1) isoform 2 [Canis familiaris] (GB:XP_850300.1); similar to PREDICTED: similar to Membrane-bound transcription factor site-1 protease precursor (Site-1 protease) (Subtilisin/kexin-isozyme-1) (SKI-1) isoform 5 [Canis familiaris] (GB:XP_861262.1); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209) -0.08530608552152 -0.706814102051847 0.494953458007157 1 0.293010711206735 12.6218300746811 -0.08530608552152 0.147916836754332 AT5G19790_at 0.833598318444815 0.556366570531024 1.05027904220220 1.11268466048411 0.787950247841205 0.845400307304432 0.797412292612193 0.670185399660232 1.06686583547242 1.33068010340235 0.928958524951207 1.24905971462573 1.19735573012430 1.56026011977004 1.37841388375443 0.984895273306479 1.2119357750439 1.24632240441063 1.19752173447769 0.214189178983831 0.215442038815868 0.217686824524551 0.220847876078676 0.214914467106691 0.212585231868074 0.218203382314624 0.219856586070868 0.219773308793314 0.215514053952196 0.220639124980613 0.219765916129773 0.211234725368650 0.218009896989504 0.214039594303242 0.214034871607177 0.220001254263059 0.224364629117365 0.217069840334684 5 5 - 6689299 6689826 6689573.182 6689110 6690042 - gene protein_coding_gene TRUE TRUE AT5G19790.1 RAP2.11 (related to AP2 11); DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to CRF4 (CYTOKININ RESPONSE FACTOR 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G27950.1); similar to putative AP2 domain containing protein RAP2.11 [Oryza sativa (japonica cultivar-group)] (GB:BAC79791.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.0609090746639337 0.70662924282493 0.495063750500929 1 0.292884182932478 2.04073763956794 0.0609090746639337 0.0547900726392987 AT5G03600_at 2.78732505202105 2.55978947996880 2.39927408749697 2.58181138166799 1.68448783334816 2.33292888103549 1.54425832612654 2.26786924438772 2.19941393858479 2.28057087040192 2.51875409912942 2.10404487646096 2.38152642634026 2.36899479639080 2.11038152257528 2.29207492438717 2.53079772066260 2.46740725948205 1.71428940044374 0.2567414194818 0.261372601595451 0.268027343848329 0.2567414194818 0.265695600271859 0.264444142404332 0.267974958996848 0.2687880470428 0.274692911848247 0.265953705074992 0.261627564328962 0.264043153450630 0.270361542379773 0.271436047323901 0.257808692934562 0.261408231933861 0.264205834639273 0.264613796011161 0.271492404178121 5 5|0 +|/ 913337 914135 913694.4 912806 914225 + gene protein_coding_gene TRUE TRUE AT5G03600.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G03610.1); similar to GDSL-lipase -like [Oryza sativa (japonica cultivar-group)] (GB:BAD46208.1); similar to Os09g0567800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063965.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.0944832906737235 -0.70527753058036 0.495870679634267 1 0.291959902068402 4.47547092225095 -0.0944832906737235 0.175561449186574 AT5G28520_at 1.85990530545252 1.73250844207427 2.33112166836266 2.11410397687895 1.75190828235152 2.2971916805512 1.82795187007900 1.59335258083234 1.87977880517695 1.87056108322892 1.84249988028712 1.89137088193436 1.85526685225097 1.82586723290501 2.32253543688497 1.75586519954481 2.37768213299381 1.79989580564118 1.84911769627679 0.216147963240016 0.220567516724248 0.216147963240016 0.219596422230165 0.222084028601241 0.221403952221310 0.222341934531558 0.220095162695830 0.219177560240487 0.219767693074478 0.225957839741192 0.220996177226196 0.225703021201199 0.218709267895418 0.219303357024194 0.229175301344163 0.226349648349201 0.219671994001715 0.229297760558934 5 5 + 10494103 10494819 10494406.091 10493114 10494856 + gene protein_coding_gene TRUE TRUE AT5G28520.1 similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT1G33790.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Jacalin-related lectin; (InterPro:IPR001229) 0.0739293373782195 0.704845671700259 0.496128655241191 1 0.291664940409449 3.85118487050589 0.0739293373782195 0.111576308388584 AT5G16610_at 4.16798596076011 4.95585903978512 5.8441530242045 5.71295898585672 7.03054600886245 6.47547762368357 5.5653917518001 5.17879930736947 4.1771267158924 4.99510079983401 5.22794970265977 5.6253284601069 6.54627944855142 5.85461250820073 4.64870253316143 6.19347974462722 5.90919429998562 5.52008767201368 5.35107351610258 0.271235755869527 0.261104853233407 0.271408530206837 0.263315473544253 0.267437756152466 0.275401702449757 0.261104853233407 0.261104853233407 0.272306878065228 0.262997680629635 0.26463003588931 0.262741253493406 0.261416297279081 0.265329214252407 0.266142700916362 0.265232807050454 0.267359538512586 0.268467240670732 0.261104853233407 5 5|0 -|/ 5445095 5445850 5445418.9 5444925 5448316 - gene protein_coding_gene TRUE TRUE AT5G16610.1|AT5G16610.2 similar to No apical meristem protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94699.1); similar to Os03g0221300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049412.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05323.1) 0.0962850095277001 0.704145750786637 0.496546934986221 1 0.291187237884587 10.8822987828434 0.0962850095277001 0.181130497160816 AT5G67420_at 8.67421818620404 8.856707520812 9.55324822418367 9.45756314999195 10.4639907091684 9.90418334705063 9.062117531593 8.81619995493593 9.012727626384 8.94779244493053 9.67937272785057 9.62513020997249 9.92945308462721 9.65959726951156 9.30930535649557 9.94338457262181 9.63761393078343 9.42040873674357 9.12789120727574 0.113338693342371 0.108428055208866 0.110804931105361 0.112040538376373 0.108653306425715 0.112947893348774 0.116606381727947 0.118163032659406 0.120327355803364 0.114413155254203 0.112457242933382 0.109663621873713 0.109800627360637 0.108416232963949 0.109003118691224 0.107892020886628 0.118611082369921 0.113356415195129 0.115076257888005 5 5 - 26921860 26922342 26922067.455 26921515 26923252 - gene protein_coding_gene TRUE TRUE AT5G67420.1 LOB domain protein 37 / lateral organ boundaries domain protein 37 (LBD37) Identical to LOB domain-containing protein 37 (LBD37) [Arabidopsis Thaliana] (GB:Q9FN11); similar to LOB domain protein 38 / lateral organ boundaries domain protein 38 (LBD38) [Arabidopsis thaliana] (TAIR:AT3G49940.1); similar to lateral organ boundaries domain protein [Caragana korshinskii] (GB:ABG90382.1); contains InterPro domain Lateral organ boundaries, LOB; (InterPro:IPR004883) 0.0737550258698738 0.70295945297476 0.49725637074636 1 0.290378558462831 18.6885304091287 0.0737550258698738 0.111659520958914 AT5G39910_at 1.54406146068837 1.78349416081753 2.04495882043517 2.21824403272395 1.62909535191635 2.03262467680309 1.50974888377835 1.60673457436586 2.29554127175702 1.77808519297306 1.57534668588054 1.80525391858379 1.91158353301767 1.50754592001896 1.7607854792285 1.56250082900066 1.66832112523633 2.28615260225603 1.85482491407961 0.201260753455038 0.201071906292155 0.205902777558007 0.206744307672630 0.207015150555419 0.20299976122969 0.200924675701586 0.203362629669517 0.202405245723164 0.208232393928955 0.202155969590528 0.210232875780991 0.203725225058842 0.199917469233473 0.205090119495883 0.201059191178612 0.199917469233473 0.205017015618790 0.209016424355858 5 5 - 15996711 15997792 15997170.545 15996640 15998899 - gene protein_coding_gene TRUE TRUE AT5G39910.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein similar to glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] (TAIR:AT5G27530.1); similar to Glycoside hydrolase, family 28 [Medicago truncatula] (GB:ABC75354.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat; (InterPro:IPR006626) -0.0674353951785697 -0.701765105976175 0.49797124533734 1 0.289565637678565 3.6640386058191 -0.0674353951785697 0.0881726542766537 AT5G27430_at 6.88930213484646 7.51107118673141 7.67783164593143 8.14589562369286 8.21594647055577 7.80838445273561 6.62936407701011 5.8843196631324 5.8633064083176 5.48449217250057 6.93727922024198 7.12695291026806 6.78446274351562 6.48848375786676 7.07141392365728 6.55917362586255 6.30639021581836 6.6097143401725 5.6954262119688 0.235192198240512 0.238395539296772 0.240468998318621 0.242787446811405 0.232770533788351 0.237089674838776 0.233861659459841 0.238349525851145 0.244118644907504 0.238524720754807 0.233177367603797 0.235508341372391 0.233346599654780 0.248351839922470 0.23912655003357 0.232404628170255 0.247681107664013 0.246195632190171 0.249606943215252 5 5|0 +|/ 9687495 9689155 9688154.1 9687381 9689423 + gene protein_coding_gene TRUE TRUE AT5G27430.1 signal peptidase subunit family protein similar to signal peptidase subunit family protein [Arabidopsis thaliana] (TAIR:AT3G05230.1); similar to Signal peptidase 22 kDa subunit [Medicago truncatula] (GB:ABD32389.1); contains InterPro domain Signal peptidase 22 kDa subunit; (InterPro:IPR007653) 0.102231528822051 0.7001942881685 0.4989124103608 1 0.288498379610636 13.5535437933817 0.102231528822051 0.199342043442997 AT5G25100_at 8.39386658874607 8.84048009127854 9.1896502666114 9.43882125498936 9.55525912088458 9.35903229518489 9.17825493373901 9.48699849111509 8.43332145190384 8.4890190371388 9.93186426047347 9.87576378743164 9.8572184237375 9.41825110471452 9.72722099707778 9.49738787154744 9.32010767046235 9.6064247368464 8.27031785339263 0.157558462292652 0.146675169453936 0.153712719855960 0.152322941787395 0.149863157087724 0.156346346248881 0.146580916218044 0.149897917515954 0.163518735733442 0.170986360192142 0.152302571269137 0.147749815320287 0.151190546584844 0.156231952392465 0.151839618915146 0.146133229462552 0.150757245488132 0.160920621076577 0.154907561878924 5 5 - 8648388 8648942 8648607.727 8648106 8651140 - gene protein_coding_gene TRUE TRUE AT5G25100.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT5G10840.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G24170.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT3G13772.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10383.1); similar to putative PHG1A protein [Oryza sativa (japonica cultivar-group)] (GB:BAD54580.1); similar to Nonaspanin (TM9SF) [Medicago truncatula] (GB:ABE93901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) 0.0726554826751831 0.700059009750178 0.498993513930961 1 0.288406568834039 18.2062116989927 0.0726554826751831 0.108815109395147 AT5G42750_at 4.84170720029412 5.22988425081527 6.57980778033224 6.34901881278811 6.90025697889849 6.26999841332091 4.82977673167064 5.06246860708405 5.89147669163041 5.05335023542631 6.01235330676864 6.01875581852929 6.13142005262479 5.61536606470057 6.41112426726872 7.20288296154844 6.57334505962487 5.94736429115458 5.78922348981232 0.205306277381175 0.203083024997003 0.217725259320179 0.199667016326296 0.203446999688563 0.217625105000753 0.210931727314669 0.203428914817530 0.209686849378967 0.208565268008361 0.208526938936725 0.200391634300979 0.199667016326296 0.227796950611794 0.200287041354282 0.200116461572421 0.219736971323135 0.204865173034422 0.204147051521740 5 5 - 17160277 17160831 17160511.909 17160048 17161388 - gene protein_coding_gene TRUE TRUE AT5G42750.1 Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26230.1); similar to BRI1-KD interacting protein 119 [Oryza sativa (japonica cultivar-group)] (GB:BAD38522.1) 0.081965220665712 0.699913619477796 0.499080688826697 1 0.288307913241868 11.6664114886007 0.081965220665712 0.140090538918466 AT5G53810_at 1.23832733396766 0.88707281672645 1.28838619637657 1.44240678086560 0.990278616501166 1.25879706523846 1.46540948591132 1.07079151240631 1.27361903718037 1.46145098544366 1.40160900304184 1.07135103381494 1.30043447667966 1.04741271720484 1.09239063003560 1.49051560063060 1.32363514053167 1.63557755392983 1.32012573535677 0.200389202402928 0.20247805470903 0.201524382626940 0.205775275616712 0.199901059291268 0.201787583678046 0.204370624132702 0.19878271816623 0.199464892749812 0.208390452576233 0.202225410670424 0.199413902746548 0.210207912548607 0.202257480414842 0.197403055709188 0.197403055709188 0.206067248906777 0.207276727687837 0.200271138890881 5 5|0 -|/ 21867567 21868499 21868157 21867405 21870237 - gene protein_coding_gene TRUE TRUE AT5G53810.1 O-methyltransferase, putative similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77520.1); similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77530.1); similar to phloroglucinol O-methyltransferase [Rosa chinensis var. spontanea] (GB:BAD18975.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077); contains InterPro domain Dimerisation; (InterPro:IPR012967); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0717810579999648 -0.69918881245694 0.499515416011208 1 0.28781636703378 2.52873257040447 -0.0717810579999648 0.105963672461702 AT5G55500_at 6.60610570488029 6.61885385908097 7.3695530710792 7.27211283009746 7.62600692747378 6.64990827730592 5.95963265093199 6.23282947258582 6.40867774322062 6.21228945225244 7.63260897678132 7.52396708136138 7.09794012604185 7.32249202043026 7.4618713218353 7.40788663754948 7.10672342115287 7.22933865969952 6.36720178633826 0.201613668982047 0.204107025953502 0.222853906455580 0.20394832397732 0.201613668982047 0.217125721312736 0.214571917242300 0.211206426799484 0.207971752888723 0.209205711281531 0.203138379360209 0.206183310947812 0.215513212604421 0.205449274254304 0.206390605025236 0.201613668982047 0.209794159069002 0.205553179510218 0.208091108010535 5 5 + 22501114 22501577 22501303.545 22499386 22501857 + gene protein_coding_gene TRUE TRUE AT5G55500.1 AtXylT ("ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE"); xylosyltransferase Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions. Identical to Beta-(1,2)-xylosyltransferase (EC 2.4.2.38) (XYLT) [Arabidopsis Thaliana] (GB:Q9LDH0;GB:Q9LKK7); similar to putative putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum] (GB:CAF25342.1); similar to putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum] (GB:CAF25343.1) -0.0937173747056717 -0.697827705942239 0.500332407932167 1 0.286894544143788 13.6304969447846 -0.0937173747056717 0.176232381163715 AT5G24970_at 3.01066045169172 2.48955402113786 3.29748559173188 3.01238330822917 3.07032352057333 3.15084264912902 3.28391649693224 2.91532003957419 3.17859453124830 3.29493839745122 4.06901193323136 4.68149869839576 3.78527838177722 3.86025870523281 4.22710248367048 4.03793639885032 3.56814348347697 4.20647698015417 3.48250968441174 0.186686879871711 0.183378796367626 0.187575827434592 0.190063862525750 0.180632383464500 0.186316197291257 0.185032303618702 0.187389964743029 0.193375000003272 0.188550137514305 0.182675963846187 0.193850250414382 0.181472530848485 0.191416452462814 0.187257825354767 0.183687156563914 0.183198985827716 0.184831148638815 0.188843131515662 5 5|0 -|/ 8604398 8605075 8604683.9 8604339 8608842 - gene protein_coding_gene TRUE TRUE AT5G24970.1 ABC1 family protein similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT1G79600.1); similar to putative ubiquinone biosynthesis protein ubiB [Oryza sativa (japonica cultivar-group)] (GB:BAC84387.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain ABC-1; (InterPro:IPR004147) -0.0759646196952287 -0.69633065658814 0.501231936416898 1 0.285882531236930 6.71538288694279 -0.0759646196952287 0.121777117513155 AT5G53140_at 7.63070367559046 7.5905050985921 8.53476635128452 8.53905726656662 8.50191334364291 8.17101926242523 8.1239013576426 8.50760323014975 7.62570564736087 7.78910675519478 9.2669820738311 9.1748205928329 9.28929661588796 8.97330332667259 9.23270358100407 9.0565137292449 8.87301313802013 8.67808082217297 7.57752048990237 0.145176179152875 0.149053817602243 0.146260005058708 0.139165990577082 0.137299982175533 0.147921022051629 0.142198112493821 0.143674802582175 0.154350519472336 0.148854476352453 0.147371448374912 0.143721572425793 0.141164380738347 0.1490839227435 0.148742772413729 0.144108808133745 0.148387793591591 0.137801587259354 0.145067130183274 5 5 + 21568154 21569287 21569004.364 21565699 21569696 + gene protein_coding_gene TRUE TRUE AT5G53140.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT5G10740.1); similar to Os02g0255100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046461.1); similar to putative protein phosphatase 2C [Oryza sativa (japonica cultivar-group)] (GB:BAD46120.1); similar to Os05g0587100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056467.1); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR000222); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.0668397903761389 0.69609868095732 0.501371410946839 1 0.285725890718550 16.5660337977923 0.0668397903761389 0.0879608712607957 AT5G08280_at 10.6713826538178 10.4014414558349 10.7262620680432 10.5592937045997 10.9446156913840 10.630270647118 10.6795379862999 10.1113226706944 10.4837107936477 10.2909728065550 11.4525924764350 11.8664885359586 11.1253571777935 11.2127249366957 12.0915809829145 11.2562316089685 10.8746586728761 11.3342784513826 10.0975595069681 0.0898214143901012 0.0887439585935757 0.089052014898247 0.0891806557059273 0.0905300890762325 0.0923361870980527 0.0907487113538304 0.0903079490469495 0.101052075806603 0.0973432419238836 0.0894968817672016 0.0897348314217034 0.0870756871410033 0.0912501681791106 0.0900541227127872 0.0911115254505962 0.093048211530591 0.0938631034865834 0.096101712250591 5 5 - 2663784 2664644 2664267.909 2663500 2665793 - gene protein_coding_gene TRUE TRUE AT5G08280.1 HEMC (HYDROXYMETHYLBILANE SYNTHASE); hydroxymethylbilane synthase Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Identical to Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (HEMC) [Arabidopsis Thaliana] (GB:Q43316); similar to porphobilinogen deaminase [Medicago truncatula] (GB:ABE91027.1); contains InterPro domain Porphobilinogen deaminase; (InterPro:IPR000860) 0.0768417750859487 0.69541646849296 0.501781725375622 1 0.285265503806336 21.4367592636081 0.0768417750859487 0.125082509953649 AT5G10100_at 1.24218790799508 1.24822185769742 1.19715701932464 1.97424272696714 0.929500332742274 1.39437170074803 0.884511179894147 1.55498763411372 1.70497957050987 1.00732967262251 1.06169925242804 1.52480485357714 1.31141990161549 1.26382903336722 0.691824223574668 1.16439926735317 1.49215836839531 1.33060228793751 1.47934520254941 0.228443559080026 0.227816006231329 0.220262313081352 0.217334320857653 0.227309494571424 0.222696318739130 0.217334320857653 0.223537361883186 0.233672590511912 0.230278090631607 0.221098862861771 0.219884179383210 0.224675401606759 0.225912134127188 0.230753939260620 0.217334320857653 0.221872086864611 0.228885408664489 0.226428679045481 5 5|0 +|/ 3158788 3160058 3159381.1 3157981 3160446 + gene protein_coding_gene TRUE TRUE AT5G10100.1 trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT5G65140.1); similar to 117M18_9 [Brassica rapa] (GB:AAZ66928.1); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337); contains InterPro domain HAD-superfamily hydrolase subfamily IIB; (InterPro:IPR006379) -0.0997833511333069 -0.694075780497174 0.50258867144675 1 0.284361940749138 2.61680269348114 -0.0997833511333069 0.194987584442461 AT5G03790_at 1.27602427268873 1.67766205699746 1.39128620704425 1.37767916409161 1.15067983074973 1.80483657572320 1.26778054426071 1.51770982733604 1.12736468180294 1.18569456290895 1.55895018944391 1.69622341623889 1.13177787302726 1.40448292086755 1.65745502188281 1.68732288012883 0.909838471163231 1.44934488341734 0.958369631759457 0.207850632351389 0.210108579841970 0.209460062282732 0.216461414475071 0.209200473157957 0.205609062347430 0.215391063337468 0.214905150957564 0.210457968555467 0.210326354259602 0.209857891196079 0.206960155704608 0.210442809268719 0.207657843848360 0.206854886537163 0.214903503024859 0.211949202632261 0.210865466053151 0.211642393156657 5 5 + 1005664 1006324 1005926.182 1004984 1006372 + gene protein_coding_gene TRUE TRUE AT5G03790.1 ATHB51/LMI1 (LATE MERISTEM IDENTITY1); DNA binding / transcription factor Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Identical to Putative homeobox-leucine zipper protein ATHB-51 (Homeodomain transcription factor ATHB-51) (HD-ZIP protein ATHB-51) (ATHB-51) [Arabidopsis Thaliana] (GB:Q9LZR0); similar to ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G36610.1); similar to Leucine zipper, homeobox-associated; Homeodomain-related [Medicago truncatula] (GB:ABE89090.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) 0.0811123816808597 0.693614547264623 0.502866464754338 1 0.284051455840437 2.69665768445064 0.0811123816808597 0.139723156166586 AT5G25960_at 0.807182684278537 0.476524474554047 0.615896133852428 1.02201668922411 0.378849694009460 0.588914008366851 0.624854032992227 0.516019852765882 0.915391605166655 0.949660380558446 0.95885680378421 0.535315040904489 0.504860661213175 0.99641606504177 1.11418156449347 0.674848830054 0.935621774774296 0.860334105801625 0.8291361382334 0.193623872285215 0.196646494495520 0.199571917509622 0.196849693770867 0.195573075576134 0.198819588319252 0.196112166037278 0.194001869737579 0.199274369293666 0.20389821942186 0.196863421327860 0.194598062503332 0.196349849193563 0.193536368459118 0.195814065332932 0.192625938713315 0.194446316381426 0.201536052671240 0.199359907952697 5 5|0 -|/ 9062920 9063841 9063278.2 9062920 9065014 - gene protein_coding_gene TRUE TRUE AT5G25960.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25950.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE82472.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.0693933188604111 -0.692762161884962 0.503380087540488 1 0.283478154481852 1.48909072812772 -0.0693933188604111 0.0994485773111106 AT5G61840_at 7.00380158629498 6.61165863158617 7.71499047900656 7.62541351120964 8.10505254433682 7.49348313694871 6.7043565969805 6.41896401334936 6.11079134405108 6.18960634008704 7.74402259877948 7.60731926258947 7.3982926468492 7.48028092957943 7.72907489438866 7.56704243885968 7.2770372506229 7.36887348880872 6.76678970353504 0.188581789543446 0.184711968908854 0.1804614446563 0.180826870972594 0.183111487829371 0.184016947787620 0.181305690803941 0.189578823809598 0.197681122529504 0.192781080212503 0.178599455014035 0.181826665950011 0.193525289875605 0.189968180047589 0.182182782147048 0.180814590263421 0.190637362254999 0.199019410146933 0.186145746249047 5 5 - 24856594 24857362 24856856.636 24856404 24859166 - gene protein_coding_gene TRUE TRUE AT5G61840.1 GUT1; catalytic similar to GUT2, catalytic [Arabidopsis thaliana] (TAIR:AT1G27440.1); similar to pectin-glucuronyltransferase [Nicotiana plumba (GB:BAC20928.1); similar to secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] (GB:AAX33320.1); similar to putative pectin-glucuronyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD26319.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.079837620494362 0.692712159889828 0.503410227162219 1 0.283444543755534 14.1483260964811 0.079837620494362 0.135962629523241 AT5G11470_at 2.18145009051749 2.27788272081324 2.56518121097983 2.59317931264381 2.46760859738376 2.31234826581303 2.27861433831905 2.34910926696647 2.09802409028492 2.4485390457596 2.38748474858689 2.31226686645958 2.14064074323215 2.55266877336420 3.13946013527807 2.39222504739359 2.83543541595621 2.27754601183722 2.42994804740083 0.176952597985498 0.182159049421915 0.177531736668183 0.182258679555635 0.178546224629206 0.185956691196896 0.181314990995687 0.193501234463267 0.192220305055816 0.181142419762154 0.191399771366206 0.181664589975948 0.191743408773008 0.17807276700023 0.190023652148025 0.178678946735513 0.189799250123449 0.183271845780021 0.182543787784940 5 5|0 -|/ 3663367 3664855 3663743.111 3663366 3667042 - gene protein_coding_gene TRUE TRUE AT5G11470.1 bromo-adjacent homology (BAH) domain-containing protein similar to nucleic acid binding / nucleotide binding [Arabidopsis thaliana] (TAIR:AT3G15605.1); similar to Os01g0610300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043543.1); similar to Bromo adjacent re (GB:ABE83440.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.056823540622218 -0.69223248860991 0.503699413377098 1 0.283122226413576 4.79328157321889 -0.056823540622218 0.0342449126080442 AT5G64130_at 9.78825310364008 9.831040945656 10.0752646004963 10.1624303116376 10.3624397664932 10.2739095563876 9.35005082436546 9.54105644504465 9.95410488459841 9.94162383426588 10.7616932148545 10.8140467337325 10.2993517207644 10.5014010161757 10.8795799559060 10.3805866242605 9.8946647535964 10.6030021762780 9.81367906445507 0.0963041445157088 0.097596146120611 0.0990396527381852 0.102493448970626 0.102267608085518 0.101702398018572 0.0977861364382037 0.100834761948527 0.108802787754934 0.109055508145785 0.098829555786495 0.0969132791504621 0.102293910856874 0.101201293674871 0.099297714402643 0.0974477720892022 0.115939830364732 0.107381248603656 0.101865906590685 5 5|0 -|/ 25681773 25682511 25682113.556 25681576 25683470 - gene protein_coding_gene TRUE TRUE AT5G64130.1|AT5G64130.2|AT5G64130.3 |unknown protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69510.2); similar to Os01g0249300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042590.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD72346.1); similar to Os01g0664500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043793.1); contains InterPro domain Lg106-like; (InterPro:IPR012482)| -0.05739521617302 -0.690780650200007 0.504575316450043 1 0.282147891110252 20.1330190453247 -0.05739521617302 0.0401208515293969 AT5G54590_at 3.25871671194522 3.21355257249562 3.91145793646704 3.68493648871942 4.04403177571805 3.87272290013698 4.26756910512863 3.95386419306243 3.36415812665373 3.00568134647547 4.34385030620047 4.53480029803003 4.30566965245558 4.30695166136399 4.4927267612934 4.13440965858293 4.12417119920355 4.01078326175865 3.36993129829124 0.240525725366156 0.238991197857909 0.230996523613191 0.230996523613191 0.236276177892742 0.237893346862786 0.236593937981292 0.233770147784638 0.236721119269374 0.236082329492867 0.237110691274200 0.236574613684456 0.241934894266930 0.239734879093806 0.239436209075313 0.230996523613191 0.241857995480088 0.235117336230231 0.239121008104176 5 5 + 22197905 22199096 22198508.727 22196979 22200052 + gene protein_coding_gene TRUE TRUE AT5G54590.1|AT5G54590.2 protein kinase family protein similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15730.2); similar to Os08g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060962.1); similar to protein-serine/threonine kinase [Nicotiana tabacum] (GB:BAA06538.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245)|similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G15730.2); similar to Os08g0138700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060962.1); similar to protein-serine/threonine kinase [Nicotiana tabacum] (GB:BAA06538.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0630981293847579 -0.69070390662021 0.504621641945937 1 0.282096439794323 7.53998676395978 -0.0630981293847579 0.0736467601478561 AT5G64060_at 1.73776734039976 1.26349478986439 1.18367903993292 1.27994297206759 1.31933913122788 1.96319491215428 1.38664621131022 1.52096788223370 1.80512757945271 1.57759744737590 1.68839298130753 1.80615395331534 2.07360954372832 1.51333100541821 1.76793688888576 1.61224848123775 1.86674647234914 1.48796774384839 1.49456078891065 0.218543780824821 0.215972604903315 0.209396496570137 0.210355714234484 0.211136919258117 0.211273425561091 0.205358796258495 0.214427441445098 0.228944625523754 0.212418597551089 0.205358796258495 0.207570449119219 0.214336190161174 0.209286839474278 0.22505964033056 0.210110502737195 0.217816190071736 0.217470112461715 0.213044790123713 5 5 - 25651086 25651626 25651410.364 25650762 25653007 - gene protein_coding_gene TRUE TRUE AT5G64060.1 ANAC103 (Arabidopsis NAC domain containing protein 103); transcription factor similar to ANAC082 (Arabidopsis NAC domain containing protein 82) [Arabidopsis thaliana] (TAIR:AT5G09330.3); similar to nam-like protein 2 [Petunia x hybrida] (GB:AAM34765.1); contains InterPro domain Galactose mutarotase-like; (InterPro:IPR011013); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.0812533995019887 -0.690571392095286 0.504701639070398 1 0.282007610089246 3.13328419606937 -0.0812533995019887 0.141312010811422 AT5G03190_at 5.72372361138854 5.27618343308083 7.33515642015679 7.1262080016477 7.06018726772613 6.68245083519299 8.04351733389661 7.46420873039823 6.7672834435673 6.31015146065215 7.48679988205674 8.11764859395024 7.88532388573713 8.15974042938131 7.37505159068573 8.62702841319306 8.37732069249096 8.26528364973443 6.63393639407541 0.179465538628333 0.201562147797672 0.196259888929231 0.176138661384915 0.175372897153888 0.181104967812033 0.189972893014562 0.180570648947516 0.194259215546588 0.181252017362795 0.170269620747125 0.178858049121784 0.174949379513855 0.174664703275627 0.184640187886894 0.176130146354353 0.181788125332007 0.175578225663195 0.179647181789365 5 5 + 759563 760105 759794 757845 760381 + gene protein_coding_gene TRUE TRUE AT5G03190.1|AT5G03190.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G53400.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD32814.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain "Winged helix" DNA-binding domain (SSF46785) -0.0830602352761716 -0.690449024869829 0.50477551722431 1 0.281925596253838 14.1425703249786 -0.0830602352761716 0.147069477792505 AT5G04410_at 9.65074144000376 9.82403671096449 10.7922392432568 10.6588376400299 10.5391972617984 10.4551733583359 9.67875068209394 9.66906737019221 9.33597315067888 9.54413369854694 10.0842560332560 9.89642893375153 10.0287940068930 9.9077868360346 9.73147548754449 10.1476319179359 10.1446501356562 10.067883129965 9.46805129324182 0.0955785176439995 0.0888497537151516 0.091573811666257 0.0902679957919079 0.093433422288076 0.0888497537151516 0.0926465260552384 0.0896953223739061 0.0972059051191164 0.0957817763652119 0.0888497537151516 0.0888497537151516 0.091776715566511 0.0945641666456004 0.0930692398458185 0.0888497537151516 0.0993125727475924 0.0891338402272562 0.0897844120314573 5 0|5 /|+ 1246054 1246393 1246236.222 1243759 1246685 + gene protein_coding_gene TRUE TRUE AT5G04410.1 NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor NAC family member, hypothetical transcriptional regulator Identical to NAC domain-containing protein 78 (ANAC078) (NAC2) [Arabidopsis Thaliana] (GB:Q84K00;GB:Q84UG1;GB:Q9LZ84;GB:Q9SNW1); similar to ANAC053 (Arabidopsis NAC domain containing protein 53), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10500.1); similar to nam-like protein 9 [Petunia x hybrida] (GB:AAM34772.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) 0.0573890313963163 0.69000972149816 0.50504079669565 1 0.281631271884267 19.8837551421438 0.0573890313963163 0.0405779133522941 AT5G14300_at 0.615159569166826 0.445749025392225 0.461705048944919 1.02267628741826 0.6205824450807 0.573851841227247 0.309590444080725 -0.00237941148612809 0.68220599827866 1.22448327029284 0.94927832901648 0.331007401803929 0.606005528307314 0.932795911703025 0.5663585317546 0.487605884780744 0.209776618614658 1.26986560995613 1.21063242469577 0.208135297114435 0.208639376720827 0.219268756274793 0.225427550537190 0.209334441695673 0.209807398769413 0.209118356452763 0.219413937418694 0.208135297114435 0.214462893544531 0.208135297114435 0.214597557709905 0.213933024039156 0.212162647028148 0.211589465980960 0.209490792759128 0.21532322136282 0.214024643810169 0.208757099639956 5 5|0 +|/ 4613291 4613946 4613614 4613105 4614026 + gene protein_coding_gene TRUE TRUE AT5G14300.1 ATPHB5 (PROHIBITIN 5) similar to ATPHB4 (PROHIBITIN 4) [Arabidopsis thaliana] (TAIR:AT3G27280.1); similar to mitochondrial prohibitin 1 [Petunia x hybrida] (GB:AAW83328.1); contains InterPro domain Prohibitin; (InterPro:IPR000163); contains InterPro domain Band 7 protein; (InterPro:IPR001107) -0.0733582588403253 -0.689813045581522 0.505159589491869 1 0.281499558094987 1.35996388526870 -0.0733582588403253 0.115168834769546 AT5G53070_at 2.36868953141911 2.33849621070057 2.61005761062245 2.83061231642524 2.29282326862495 2.44347098860643 2.2744746821187 2.74455578474945 2.65306099177695 2.58555735367137 2.54720103823274 2.96811658176354 2.97677534765400 2.68314466261598 3.41277257299686 2.88091392771068 3.48184551053041 3.00816490687826 2.58205782406079 0.201448031701625 0.197820714924645 0.202432154299183 0.199063128781745 0.198643221869377 0.198956442052493 0.197501228380402 0.208285833855278 0.202196288340414 0.203411112727722 0.215820256383035 0.200150826138196 0.202409733863165 0.204411853070824 0.209566196208263 0.197501228380402 0.206716198113351 0.205189255015541 0.206616609110223 5 5|0 +|/ 21536388 21537367 21536914.9 21535819 21537647 + gene protein_coding_gene TRUE TRUE AT5G53070.1 ribosomal protein L9 family protein similar to Ribosomal protein L9 N-terminal-like [Medicago truncatula] (GB:ABE77492.1); contains InterPro domain Ribosomal protein L9 N-terminal-like; (InterPro:IPR009027); contains InterPro domain Ribosomal protein L9; (InterPro:IPR000244) -0.0674498612125921 -0.687877794394341 0.506329386551017 1 0.280205339040501 5.28877698668378 -0.0674498612125921 0.0937098584161538 AT5G65470_at 5.43928751184712 5.6065743618746 6.53398615401727 7.21547033920136 7.20940472088943 6.63549034630727 7.96583897675001 7.61780726011539 6.63357227474809 6.61492451017972 9.15840431600922 8.59265885804965 8.36174581239559 8.49084927887288 8.03854404759693 7.99898199769575 7.49544448275778 8.0068083958403 6.66569546249154 0.251185400016188 0.245538000032929 0.259921224922428 0.242151201240741 0.234294678926463 0.245814508048671 0.236940214370361 0.238275042264162 0.25592513946645 0.239834501390937 0.240081274869804 0.234294678926463 0.237352023225398 0.245129666038149 0.241475139101221 0.238018015351035 0.247859599945128 0.244895086662651 0.234631065208151 5 5|0 +|/ 26191449 26192092 26191777.4 26189357 26192259 + gene protein_coding_gene TRUE TRUE AT5G65470.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24530.1); similar to putative auxin growth promotor protein [Lycopersicon esculentum] (GB:AAK84479.1); similar to Os09g0412200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063155.1); contains InterPro domain Protein of unknown function DUF246, plant; (InterPro:IPR004348) -0.0894054716624961 -0.686310595404351 0.507277904382951 1 0.279159678537064 14.230979324438 -0.0894054716624961 0.168042171006253 AT5G41040_at 0.53575744062569 0.92700441274922 0.624536504997268 0.737199910232097 1.01924141574100 1.25305090903895 0.991954657570457 0.604903719740176 0.809204844919804 1.82045523241846 0.872619302244775 1.18549190009506 0.72059310403741 0.457508840921886 1.07545758754462 1.38106311548519 1.25387925511223 1.03430568263765 0.834285316390001 0.192025712045429 0.189730320471203 0.192641943372732 0.191499468048324 0.188561652873721 0.192533255677138 0.190585093745389 0.187021559151903 0.187021559151903 0.204307572242329 0.194115156813055 0.187021559151903 0.195648505665172 0.189158339752327 0.191903268155418 0.187021559151903 0.194170924397731 0.189154169413987 0.187431853514803 5 5 + 16449756 16450265 16449993 16448602 16450533 + gene protein_coding_gene TRUE TRUE AT5G41040.1|AT5G41040.2 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G63560.1); similar to Os11g0507200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067952.1); similar to putative hydroxyanthranilate hydroxycinnamoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD88037.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.0702813206405618 -0.686309628375189 0.507278489989556 1 0.279159033988438 1.91283777787983 -0.0702813206405618 0.105299538675991 AT5G22430_at 0.970347708079208 1.51712680825290 1.13642920844916 1.45340922864085 0.970746266299098 1.27822085099445 1.28900267896861 1.12740489912211 1.11020234460359 1.26704837940614 1.24473945223004 1.10004086467382 1.10040396599159 1.09050446684156 1.72436798255297 1.01748544961375 1.38275102942184 1.54961937469371 1.36751811415481 0.209613617341345 0.209697117743050 0.211281127351298 0.217802132410684 0.211499054749928 0.209501972819676 0.209501972819676 0.213607830755539 0.218380322718994 0.219647765899226 0.209844126123209 0.210851410888636 0.218240023380586 0.210876913601342 0.212121409014258 0.209501972819676 0.210159811563730 0.214072023572836 0.216241186263456 5 5|0 +|/ 7433988 7434616 7434345.1 7433793 7434938 + gene protein_coding_gene TRUE TRUE AT5G22430.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G27385.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD27801.1) -0.075677066201501 -0.685616905862134 0.507698088556949 1 0.278697529479972 2.48008363242109 -0.075677066201501 0.124803273039139 AT5G54380_at 6.1932809967719 5.8870433329018 6.7018299004824 7.10731986998379 6.95398658856495 7.58472160055216 6.67170576440492 6.29257616407803 7.18842817051081 7.18824739702296 9.30567790689237 7.9797548906006 8.62551141660366 8.5853349193543 8.08441977810125 7.61545972664176 7.3772455627967 8.15065370819608 7.14321744684198 0.179727283216106 0.184428197100011 0.178729716034517 0.176867478028364 0.182492849065894 0.178962776266547 0.183025781561682 0.181890676817269 0.189772985186444 0.191877757498568 0.182692768294959 0.174268578059463 0.174945703716234 0.179998501285067 0.177735551360450 0.177186389091531 0.176350845301448 0.17506373973995 0.187739181067530 5 5 - 22094541 22095104 22094783.636 22094318 22097106 - gene protein_coding_gene TRUE TRUE AT5G54380.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59700.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G46290.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G21480.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93789.1); similar to putative protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAK63934.1); similar to protein kinase family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98993.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0848611462388682 -0.684951706289967 0.508101212431794 1 0.278254759875396 14.3684604822710 -0.0848611462388682 0.154762499581752 AT5G58920_at 6.62009154827483 6.71368275844177 6.96443129672535 7.39039161317482 7.8346198766485 7.67666755923599 6.35449923858081 6.45545879211964 5.4553987967147 5.91132094464895 7.19089155954597 7.16748615352884 7.10096075089817 7.07732519865332 6.81035754531735 7.14592294817044 7.60044295180862 6.6895796034635 6.07429516355511 0.202008035337045 0.195568385741390 0.200905092501462 0.205619811292719 0.20544008266995 0.204246332524615 0.197647518221078 0.196975903394176 0.208338205759797 0.198876377871027 0.200017316078799 0.195568385741390 0.203221743354994 0.214261692903516 0.199523739087851 0.19601164294602 0.202880901048662 0.201827135543395 0.206673400521765 5 5 + 23810802 23811100 23810941.818 23810355 23811471 + gene protein_coding_gene TRUE TRUE AT5G58920.1 similar to Os01g0362000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043026.1) 0.0643054966452603 0.683705145928354 0.508857170681899 1 0.277426077398707 13.4570015723483 0.0643054966452603 0.0821496288875868 AT5G11000_at 6.06976839339338 7.00865659885215 6.70856111422924 7.01746793228828 7.20064645358562 7.06649148980084 5.1072300008835 6.03885002858924 6.36850182348893 5.29309274662158 7.54106526923109 7.97701672665261 6.92774378639355 7.75643532063036 7.5433175620692 7.27664170780013 5.34022909159798 6.65746143427708 5.59301219823152 0.207185094731633 0.198424770738021 0.200644308623278 0.202069834760163 0.208171735175788 0.199883479637978 0.201932842350561 0.205520412493159 0.205239538160583 0.199966173860628 0.203917371824749 0.214891384650947 0.206163808001083 0.200868771329065 0.195918765607511 0.195918765607511 0.213610174748305 0.204603299742980 0.218089453205197 5 5 - 3479178 3479727 3479378.727 3479030 3480426 - gene protein_coding_gene TRUE TRUE AT5G11000.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25200.1); similar to Os08g0439600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061898.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28921.1); contains InterPro domain Protein of unknown function DUF868, plant; (InterPro:IPR008586) 0.112722297857769 0.681162799379781 0.510401033062137 1 0.275740243304906 12.9667212273422 0.112722297857769 0.236195711474198 AT5G60730_at 1.03522629622079 0.90044072100841 1.71094253812959 1.48475559771689 0.881785544724247 1.00839219389224 0.99092828396925 0.906759503871852 1.29641341598490 0.985013458922914 0.807028897224435 0.917343497446723 1.26645347423553 1.21721424012580 1.37907013829184 1.47417996380446 0.929650970455959 1.63008055921683 1.45717123957295 0.219202042177636 0.213126783701082 0.22180915425462 0.214835093474249 0.211622670332457 0.216578210331655 0.211622670332457 0.223125711276012 0.223636772607043 0.227939200336089 0.214628815616597 0.234189384504591 0.215414662038651 0.226158127693986 0.215756016054323 0.211622670332457 0.226365247064650 0.216109443361249 0.211622670332457 5 5 + 24441518 24442535 24442113.1 24439961 24442718 + gene protein_coding_gene TRUE TRUE AT5G60730.1 anion-transporting ATPase family protein similar to anion-transporting ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G10350.1); similar to putative ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD15543.1); contains InterPro domain Anion-transporting ATPase; (InterPro:IPR003348) 0.0582740436857873 0.680111931856722 0.511040001496062 1 0.275045080401567 2.33931737948855 0.0582740436857873 0.0526158214045013 AT5G27870_at 0.34224062060457 0.670815421471626 0.235951983336653 0.604682091875239 0.468562699698239 0.520210754646048 0.322200577537117 0.506525975686344 0.552459438792019 0.466040414643734 0.229743611028053 0.491606773388758 0.506008179408677 0.534244540643716 0.0203235348046160 0.275672383769411 0.288816668797846 0.177721715160916 0.0313746279394877 0.195701499993424 0.188040363849414 0.192145850352914 0.195929207611701 0.188040363849414 0.193843165636638 0.192180634000852 0.188040363849414 0.195695031783105 0.193668565102279 0.198632554210116 0.188040363849414 0.190061236699821 0.194595818406609 0.202607966193495 0.194664577124689 0.198292447787824 0.205991686922558 0.192390045713166 5 5 - 9878996 9879567 9879374.636 9878995 9881810 - gene protein_coding_gene TRUE TRUE AT5G27870.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G05610.1); similar to Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] (GB:ABE80624.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.0660263875385528 -0.67843666050507 0.512059622314723 1 0.273938886177342 0.791636433773811 -0.0660263875385528 0.0916645359639731 AT5G26230_at 3.19717670521466 3.8524109497815 3.42419761480722 3.48123295212543 3.4459536350388 3.71222069766806 3.98505766080643 3.84407273313794 2.88779833914663 3.0483149670601 5.00996539148752 5.3177589077546 5.39318736724441 5.12593098875826 4.74157531261294 4.63724207411798 4.30979609154244 5.14875212164398 3.65535561334764 0.246905140341384 0.247427942599028 0.256576376730331 0.263133468586200 0.247136380976628 0.262394098288463 0.246832949528795 0.257240737089106 0.260705257562236 0.249123794256198 0.253738543705971 0.253809176097546 0.255596987462178 0.276152827284585 0.248084183787781 0.247457301799535 0.262966254235735 0.254360797134687 0.255541232939852 5 5 - 9173608 9174093 9173792.727 9173520 9174545 - gene protein_coding_gene TRUE TRUE AT5G26230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42750.1); similar to Os05g0390600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055441.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001078830.1) 0.0749531121792804 0.678031284729097 0.512306529080738 1 0.273671586759981 7.6966315377792 0.0749531121792804 0.125193997370604 AT5G40870_at 6.65517172416199 7.01151275181376 7.66215795088849 7.48924952873328 8.25636474224487 7.60468655895136 7.10957951015485 6.88819478781743 6.32646433818039 6.4881495270026 7.53524830056303 7.55530801389061 7.53349189684273 7.70986904800941 7.2799409172817 7.58597487065518 7.26747299079597 7.67699103793982 6.59749173291052 0.196989202854195 0.180091131827742 0.183023875010008 0.179096180556449 0.194625638051513 0.194058978873242 0.186312934274158 0.182305264226048 0.192183885566177 0.192104255696150 0.185060628024016 0.180606024266648 0.180449508701231 0.189646884340196 0.188426257472993 0.183215060558928 0.193386288428912 0.189807248231188 0.183238130175161 5 0|5 /|+ 16394480 16395569 16395153.667 16392136 16395880 + gene protein_coding_gene TRUE TRUE AT5G40870.1 ATUK/UPRT1; ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT3G27190.1); similar to uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] (TAIR:AT1G55810.3); similar to uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1) [Arabidopsis thaliana] (TAIR:AT4G26510.2); similar to Os09g0505800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063605.1); similar to Phosphoribosyltransferase; AAA ATPase; Phosphoribulokinase/uridine kinase [Medicago truncatula] (GB:ABE83101.1); similar to Os08g0530000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062322.1); contains InterPro domain Phosphoribulokinase/uridine kinase; (InterPro:IPR006083); contains InterPro domain Uridine kinase; (InterPro:IPR000764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836) -0.0785518848321858 -0.677724408253243 0.512493489123583 1 0.273469333232138 14.32898419461 -0.0785518848321858 0.137420212205790 AT5G67060_at 2.17709001705587 1.30170034206812 1.65532822746461 1.68057342576003 1.81623847513931 1.50033391797603 1.78157775521844 2.06827429013785 2.46461292502971 1.97823290036265 2.16293070601803 2.24116461550233 1.96066596058521 1.87837930996171 2.95111718006986 1.99861908186533 2.47302914688352 2.45591945108085 1.42867994273358 0.192276898455412 0.199430859781460 0.190186272621481 0.198324139690279 0.19517394137859 0.192901755165645 0.1926329785928 0.192369812330575 0.194176636613938 0.194670348822948 0.194881267637907 0.193186080291595 0.199278537471853 0.192435609456522 0.193415124669255 0.197024265260377 0.196420061435273 0.211281472391340 0.190186272621481 5 5 + 26783630 26784118 26783864.636 26783354 26784476 + gene protein_coding_gene TRUE TRUE AT5G67060.1 basic helix-loop-helix (bHLH) family protein similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G50330.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE93563.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.0883910279756257 -0.677163619462926 0.512835246939674 1 0.273099948773721 3.85884127512145 -0.0883910279756257 0.168578249388296 AT5G07760_at 1.18368600644223 1.21798380890437 1.49269038325542 1.16162759903992 1.02901429233874 1.55998290549304 0.85332575755094 1.48397507148347 1.88117316638564 1.13592060432369 1.60084981686377 1.33839265983824 1.51142571058864 1.6196734065754 1.39569179504034 1.61863993421526 1.41708431270649 1.29670280104492 1.72349826006625 0.189755171029926 0.188064427131258 0.189509038962649 0.193352664961964 0.194263851250853 0.194269963415779 0.195450952584924 0.195170012422787 0.192042069321538 0.202108140732421 0.202868606634238 0.194484765152069 0.193346202623740 0.191020602130728 0.191649293318876 0.188064427131258 0.188536318292658 0.200549709754970 0.188064427131258 5 5|0 +|/ 2472548 2473592 2473032.444 2468240 2473658 + gene protein_coding_gene TRUE TRUE AT5G07760.1 formin homology 2 domain-containing protein / FH2 domain-containing protein similar to formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G07650.1); similar to putative diaphanous homologue [Oryza sativa (japonica cultivar-group)] (GB:BAC55695.1); similar to Os07g0596300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060171.1); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) -0.0834664162883558 -0.676027921622794 0.513527784872766 1 0.27235273229131 2.77528817716401 -0.0834664162883558 0.153855731041572 AT5G52330_at 1.86490777661334 1.72414630817653 1.84622887040745 1.63501639715790 1.27691800411451 1.96435220407879 1.64325209670736 1.86204797748413 1.92516579357945 1.51592057228385 2.2132241371322 2.21625817378839 2.10973885211304 1.83054189468332 1.96033610820573 1.87372011437010 1.87707049556253 2.27814855704822 2.01128676797263 0.185033681865379 0.190974610550333 0.185539111867786 0.192277691726960 0.189603976857336 0.193581700279689 0.183636636513163 0.187010671320038 0.184067415709518 0.190509715186831 0.183978253671515 0.183297887970227 0.185707086868795 0.190032908076424 0.183088663275793 0.194184102677773 0.187425074076249 0.187270922258584 0.194793266050216 5 5|0 -|/ 21265253 21265576 21265388.8 21264822 21267651 - gene protein_coding_gene TRUE TRUE AT5G52330.1|AT5G52330.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04300.1); similar to MATH domain, putative [Medicago truncatula] (GB:ABE87963.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) -0.0766918951397929 -0.674801953743391 0.514275995007909 1 0.271547406656741 3.65827745578829 -0.0766918951397929 0.132345743940588 AT5G35920_at 0.975404683853315 1.06294149486328 0.9454750602539 1.28019294204308 0.970141147707189 1.67611698710333 1.05817435207335 0.698361693858285 1.00780404902606 1.18711990180409 1.05631886033799 0.75503103735909 1.26377236302461 1.28662025492052 1.12517518868923 0.934342934366321 1.24831214958201 1.27021982355163 1.04556093246619 0.190337916452629 0.195289593655252 0.191851320810461 0.1926446519697 0.190986398019766 0.197973400118370 0.200339710321649 0.191374293228103 0.200386391778168 0.198317939501146 0.198597821422048 0.190337916452629 0.203182803994851 0.199834631145579 0.204372635397626 0.191525828844193 0.190337916452629 0.190337916452629 0.202711289168828 5 5 + 14073690 14074110 14073878.7 14073667 14074134 + gene protein_coding_gene TRUE TRUE AT5G35920.1 CYP79A4P (cytochrome P450, family 79, subfamily A, polypeptide 4 pseudogene); heme binding / iron ion binding / monooxygenase a cytochrome P450 pseudogene similar to CYP79A2 (CYTOCHROME P450 79A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G05260.1); similar to cytochrome P450 CYP79E1 [Triglochin maritimum] (GB:AAF66543.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0819416142385394 0.67449992525613 0.514460423254367 1 0.271349211801753 2.18216889734165 0.0819416142385394 0.149626327685579 AT5G25810_at 2.14937585273744 2.11763003271629 1.30460058393007 1.67902205974277 1.77811330241979 1.36466921180239 1.79706478263111 2.35281916948373 2.13869588451693 2.25543515644255 3.52582602165092 3.43301739398182 3.27182266880535 3.39603068783654 2.61398222095581 3.30712833960203 2.70959561254217 3.41706450797971 2.61025448287140 0.248649156786663 0.251692633456636 0.247674933903398 0.246576722162452 0.249876592476367 0.256683439644585 0.250255339181515 0.255439889646714 0.258175788595942 0.246976025666006 0.246789225926203 0.247564266181685 0.249333220271519 0.260624971435388 0.254384636977355 0.249197672357161 0.250839091050198 0.267450787234117 0.254468034926047 5 5 - 8987008 8987472 8987210.364 8986774 8987790 - gene protein_coding_gene TRUE TRUE AT5G25810.1 TNY (TINY); DNA binding / transcription factor encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis. Identical to Transcriptional factor TINY (TINY) [Arabidopsis Thaliana] (GB:Q39127); similar to TINY2 (TINY2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11590.1); similar to DREB-like protein [Cucumis melo] (GB:BAD01554.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0774977590575704 -0.671343461979304 0.516390218536473 1 0.269282742652281 4.58996367757274 -0.0774977590575704 0.136373025706818 AT5G65590_at 2.75607661727838 2.24585808106257 2.53997370177685 2.53950752954920 2.06112089926067 2.69643375161795 1.97322743778427 1.61068575354073 2.28633777679596 1.98646991336563 2.51588195613778 2.91558076679301 2.10464007959520 2.23873680787421 2.57336153021373 1.99583396293235 2.74857137217232 2.24853061592327 2.06495400630499 0.21964438288608 0.223661488159520 0.223940781670234 0.224214612393217 0.218846063571238 0.219080232406145 0.219731791080288 0.221114082753974 0.231650906161331 0.224364933018199 0.225502123560170 0.223589528086012 0.225320469386005 0.222670078873759 0.223653936306550 0.221662951029235 0.224979349627527 0.236383928031119 0.220423903338934 5 5 - 26229460 26229875 26229681.636 26228972 26230362 - gene protein_coding_gene TRUE TRUE AT5G65590.1 Dof-type zinc finger domain-containing protein Identical to Dof zinc finger protein DOF5.7 (AtDOF5.7) (DOF5.7) [Arabidopsis Thaliana] (GB:Q9LSL6); similar to OBP2 (OBF BINDING PROTEIN 2), DNA binding [Arabidopsis thaliana] (TAIR:AT1G07640.3); similar to putative Dof zinc finger protein [Oryza sativa (japonica cultivar-group)] (GB:AAT76333.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) 0.0830320376075557 0.671275200772403 0.516431999512027 1 0.269238151165338 4.56797515578921 0.0830320376075557 0.154337408967328 AT5G57410_at 3.92077215567008 3.65559579131461 3.74233111552118 3.66978667815357 4.89583444414414 4.17373100952093 3.44521966185022 3.48393914625339 2.94171383473076 3.08322137162296 4.42779989923754 4.65651123675172 3.63058923110988 4.44220518945319 5.15756598236749 3.68379091361590 3.58993720569945 3.70124541191173 3.39596481311791 0.246864311529466 0.247871768420429 0.248149902821533 0.252765630180866 0.250800992911554 0.251871279857487 0.250402143487258 0.256232899837232 0.256025352250128 0.253145162201327 0.251160542099704 0.249732944539781 0.250046156710516 0.247695453019636 0.250685066505931 0.246864311529466 0.253012260583971 0.254781967162364 0.258271538555793 5 5|0 -|/ 23282449 23283496 23282926 23282122 23285097 - gene protein_coding_gene TRUE TRUE AT5G57410.1|AT5G57410.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G18876.1); similar to hypothetical protein MtrDRAFT_AC135801g19v1 [Medicago truncatula] (GB:ABE82185.1); contains domain no description (G3D.1.20.5.170); contains domain SUBFAMILY NOT NAMED (PTHR21736:SF5); contains domain Cytochromes (SSF47175); contains domain FAMILY NOT NAMED (PTHR21736) 0.0767172085757086 0.671021879440706 0.516587068724949 1 0.26907270571132 7.52415407043297 0.0767172085757086 0.133881441802376 AT5G26740_at 6.47442357831589 6.86404142408042 7.66365333526734 8.03329313926831 8.48762003292811 7.89063008895347 7.41591071221589 7.13781405840813 6.92868521417829 6.66200644352101 8.12121482811256 7.78080438482086 8.08249547291152 8.10709517706705 7.47351879428098 8.15932501901367 7.41921500813365 7.81890184284971 6.71070218367649 0.220236084576924 0.198776931711641 0.208357100067120 0.203066710332053 0.199418223323481 0.201491891366041 0.209112612761555 0.209885620665038 0.220318262137358 0.202763173357652 0.197003287792789 0.199149017172635 0.200400408906388 0.196851175659566 0.204553279874036 0.195307480875713 0.228032478670636 0.203753296830937 0.208945223088248 5 5 + 9293768 9294370 9294127.818 9291931 9294690 + gene protein_coding_gene TRUE TRUE AT5G26740.1|AT5G26740.2|AT5G26740.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05940.1); similar to Protein of unknown function [Medicago truncatula] (GB:ABD32854.1); contains InterPro domain Protein of unknown function DUF300; (InterPro:IPR005178) 0.080700190667149 0.670847780253132 0.516693658599249 1 0.268959033678743 14.8146495943584 0.080700190667149 0.147062907403272 AT5G27510_at 1.65590670139466 1.99061586102808 2.07868124836451 2.18240196434692 1.79977310261245 2.17985862594246 2.13830756707711 1.67824815209542 2.02591970072647 2.32416657066076 2.51472941573803 2.33083169120336 2.40233944753413 2.04396953138610 2.36850227890543 2.04755889794538 2.67150370615192 2.24043194683310 2.49195810337898 0.232973860035056 0.235215142868862 0.232973860035056 0.235618228769435 0.235250430756768 0.243132796595778 0.232973860035056 0.238693704431414 0.236564780872495 0.235134613403555 0.232973860035056 0.233385866312722 0.236400353970457 0.238107371823848 0.238903488708253 0.235328676143403 0.237231144073830 0.232973860035056 0.240315404964296 5 5 + 9713510 9714010 9713751.182 9713176 9714081 + gene protein_coding_gene TRUE TRUE AT5G27510.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G12090.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93553.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0725832466313411 -0.670545983575467 0.51687846050169 1 0.268762049760578 4.26705656421649 -0.0725832466313411 0.119759313817563 AT5G38630_at 7.784272439568 8.22328976471215 8.58696498034827 8.74887184620222 8.76515755595253 8.10310273951769 7.72441956197859 7.51235457190009 7.99900132248773 7.2358023942923 8.33623189502628 8.57983984116127 8.36496199928423 8.57709178643725 8.48030572174076 8.20972657515541 8.07172117944134 8.38509251577201 7.13627093696514 0.149132666451570 0.143505690197875 0.146391751116063 0.140546680619848 0.145871372112132 0.146535412931254 0.148047756956142 0.142393672605781 0.153774338523283 0.168356584323214 0.14659002087547 0.141727524158987 0.143372803067018 0.150204022333393 0.140546680619848 0.140546680619848 0.152393780449077 0.149576158347695 0.157188950779606 5 5|0 +|/ 15483470 15484689 15484324.6 15483222 15485415 + gene protein_coding_gene TRUE TRUE AT5G38630.1 ACYB-1 (Arabidopsis cytochrome b561 -1); carbon-monoxide oxygenase Encodes for cytochrome b561. similar to ACYB-2 (Arabidopsis cytochrome b561 -2), carbon-monoxide oxygenase [Arabidopsis thaliana] (TAIR:AT4G25570.1); similar to cytochrome b561 [Citrullus lanatus] (GB:BAE46407.1); contains InterPro domain Cytochrome b561 / ferric reductase transmembrane; (InterPro:IPR006593); contains InterPro domain Cytochrome b561; (InterPro:IPR004877) -0.0800079922281829 -0.670340859511873 0.51700408839928 1 0.268628210620697 16.0973773444395 -0.0800079922281829 0.145019207843654 AT5G47630_at 4.79177733694013 5.1639630315044 5.64648520852004 5.41381034504681 5.98545050790836 5.6325307764603 5.10971431343788 5.38948627999108 4.20536273944718 4.28845841265898 5.58923011202259 6.09166914327915 5.47540536375525 5.88603118153029 5.56969544568527 5.79371659617145 5.49393857546852 4.89096686219027 4.67805041910538 0.245888830030008 0.239751732689347 0.250781431059923 0.24996022216095 0.240295626451785 0.253978758087398 0.246554605298243 0.248876957955637 0.279149668208863 0.245501606540408 0.252807168754359 0.244130605162947 0.244966800456385 0.245510421603064 0.252155751638981 0.243020515387294 0.252994723487626 0.248131112321119 0.247017662445493 5 5 + 19323627 19324085 19323881.364 19323370 19324320 + gene protein_coding_gene TRUE TRUE AT5G47630.1|AT5G47630.2 acyl carrier family protein / ACP family protein similar to mtACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1), acyl carrier [Arabidopsis thaliana] (TAIR:AT2G44620.1); similar to acyl carrier protein, putative [Brassica oleracea] (GB:ABD64990.1); contains InterPro domain Acyl carrier protein-like; (InterPro:IPR009081); contains InterPro domain Acyl carrier protein (ACP); (InterPro:IPR003231); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) -0.0694876425561928 -0.669498159332085 0.51752038904067 1 0.268078758610389 10.3863799835178 -0.0694876425561928 0.108829849093396 AT5G51170_at 4.99399310278441 5.87235379825657 7.1008212574897 6.84119771199661 6.93706537378773 7.27026118321171 5.39063900033155 5.5588473359991 5.03280984995059 5.22609112117542 5.66035541571853 5.49517810651284 6.0313396577621 6.01347593836953 5.39401880768287 6.3572462416462 6.48701019530358 6.37982394731214 5.74076168987098 0.185381164661954 0.184306587226698 0.190956315814944 0.181246028133544 0.193355052428036 0.189243926396359 0.184123532120138 0.199592201742175 0.196023350055081 0.194692055711443 0.187962061936895 0.186658665642210 0.185951495385344 0.181246028133544 0.188460167922317 0.181246028133544 0.193116660649167 0.183900193444566 0.185000369868249 5 5 - 20811195 20811956 20811615.636 20811020 20812625 - gene protein_coding_gene TRUE TRUE AT5G51170.1|AT5G51170.2 similar to Os02g0651000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047590.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD26563.1); contains domain FAMILY NOT NAMED (PTHR13522); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 (Hypothetical pro (PTHR13522:SF1)|similar to unnamed protein product [Homo sapiens] (GB:BAB14469.1); similar to hypothetical protein LOC79650 [Homo sapiens] (GB:NP_078874.2); similar to Os02g0651000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047590.1); contains domain FAMILY NOT NAMED (PTHR13522); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 (Hypothetical pro (PTHR13522:SF1) 0.0881622848198025 0.668930805389466 0.517868164495746 1 0.267709191461903 11.9009108083759 0.0881622848198025 0.171161070019165 AT5G65720_at 8.74688583428334 8.97913603732067 9.78229295914486 9.75158158702124 9.94506456437578 9.59886324975112 9.595330635091 9.52751049916194 8.67916431464836 9.19198816500731 9.58797202912686 9.57076380274351 9.80968817059079 9.76981327344618 9.7139641496086 9.87717315792422 9.82998834208913 9.73389787369521 9.02906146510032 0.0947109662443068 0.0914781347490788 0.0926230946770287 0.0919216797386641 0.095129184696732 0.0958612342646848 0.092008958388918 0.0984390391622205 0.102877855387374 0.0945532445991838 0.0959649725996918 0.091552568702151 0.0947547749667648 0.0934128671254093 0.0925852202051025 0.0920616070424554 0.0946464231082534 0.0959517748172722 0.0959421107263003 5 5 + 26314377 26314912 26314612.727 26313479 26315298 + gene protein_coding_gene TRUE TRUE AT5G65720.1|AT5G65720.2 ATNIFS1/NIFS1 (ARABIOPSIS THALIANA NITROGEN FIXATION S HOMOLOG 1); cysteine desulfurase/ transaminase|ATNIFS1/NIFS1 (ARABIOPSIS THALIANA NITROGEN FIXATION S HOMOLOG 1) cysteine desulfurase whose activity is dependent on AtSufE activation. Identical to Cysteine desulfurase 1, mitochondrial precursor (EC 2.8.1.7) (Protein AtMtNifS) (NIFS) [Arabidopsis Thaliana] (GB:O49543); similar to ATCPNIFS/ATNFS2/ATSUFS/CPNIFS/SUFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE), cysteine desulfurase/ selenocysteine lyase/ transaminase [Arabidopsis thaliana] (TAIR:AT1G08490.1); similar to Cysteine desulfurase NFS1 (ISS) [Ostreococcus tauri] (GB:CAL52881.1); similar to Os09g0338400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062914.1); contains InterPro domain Aminotransferase, class V; (InterPro:IPR000192) -0.061028477995849 -0.668852424980293 0.517916220857963 1 0.267658157946174 18.8425309615129 -0.061028477995849 0.0732857929855057 AT5G60110_at 1.33364865348704 1.45532646945354 1.38448315182240 1.28008299628263 0.943497464491228 1.5020195641509 1.00064471440891 1.49061546592302 0.939413442146903 1.33220636502467 1.54191957698891 0.95272745394005 1.29798159585310 1.02778760686519 1.46016454346359 0.885216324181988 1.05061304413747 0.831343194124916 0.975168087264087 0.166786839431422 0.162650957510330 0.163697730089163 0.168573808400806 0.166835836052800 0.162650957510330 0.169508800337177 0.165612825901218 0.177464072793042 0.167829727181368 0.166893986912673 0.166718635790072 0.165642769253881 0.170429774623367 0.165704264024918 0.166592445965874 0.175198747281621 0.164407417968672 0.169568047887607 5 5 + 24220014 24220034 24220022.727 24219180 24220163 + gene protein_coding_gene TRUE TRUE AT5G60110.1 APUM18 (ARABIDOPSIS PUMILIO 18); RNA binding similar to APUM19 (ARABIDOPSIS PUMILIO 19), RNA binding [Arabidopsis thaliana] (TAIR:AT5G60180.1); similar to Os12g0493900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066803.1); similar to AGL086Cp [Eremothecium gossypii] (GB:NP_986580.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Pumilio/Puf RNA-binding; (InterPro:IPR001313) -0.0757270997447752 -0.668407316623524 0.518189174531553 1 0.267368451255964 2.40540570946394 -0.0757270997447752 0.131535565334795 AT5G51040_at 9.49065293730601 9.45375467659396 10.3324421063136 10.4102193551076 10.3002406099466 9.97166366910177 9.46955001209968 9.78080595864545 9.01343950852697 9.28562520760186 9.49447902599968 9.5871888545648 9.59752448587907 9.62325216673022 9.36341708705667 9.77260145655024 9.9351196618764 9.750511595084 8.89443540203252 0.105191495342740 0.0995739842953844 0.104427003510686 0.105511567850692 0.108504214895732 0.105610131809894 0.104127119112820 0.0995739842953844 0.113871355716945 0.108203785338766 0.104416717058684 0.102687234040958 0.103758764460218 0.111848914583001 0.105892021951500 0.0995739842953844 0.105070454578779 0.105844592562703 0.115229964224595 5 5 + 20767936 20768946 20768461.182 20767886 20769250 + gene protein_coding_gene TRUE TRUE AT5G51040.1|AT5G51040.2 similar to Protein of unknown function DUF339 [Medicago truncatula] (GB:ABE80212.1); contains InterPro domain Protein of unknown function DUF339; (InterPro:IPR005631) -0.0623054924993864 -0.668060136039502 0.518402135196318 1 0.267142604840056 19.2536720811917 -0.0623054924993864 0.079728042014796 AT5G09460_at 6.4906811838371 6.14218363776973 7.2863857245886 6.62928449212895 7.37553995797322 7.32831756679297 6.69277181294565 6.31234143147377 6.27601598681121 6.10543406725492 7.71869774710126 8.3492188376444 7.57414060090608 8.14270527442758 7.40055533003104 8.02210878551806 7.74666084708096 7.26767136026518 6.48872500677598 0.173324445447216 0.166644012875881 0.176402254293664 0.183066809518442 0.162038642328107 0.163509763139286 0.174857506482597 0.163689963376740 0.163457130604763 0.171592343572063 0.172329554187224 0.170233982372158 0.160751922815420 0.160751922815420 0.170510907286995 0.169940287881612 0.176029944624520 0.165688461240464 0.170864899712118 5 5 - 2944506 2945011 2944694.273 2944438 2945418 - gene protein_coding_gene TRUE TRUE AT5G09460.1 transcription factor/ transcription regulator similar to SAC51 (SUPPRESSOR OF ACAULIS 51), transcription factor/ transcription regulator [Arabidopsis thaliana] (TAIR:AT5G64340.1); similar to Os03g0391700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050282.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) 0.0796573440592259 0.667946895591964 0.51847160813886 1 0.267068963326032 13.8160773266817 0.0796573440592259 0.144807547255091 AT5G03930_at 1.27487991186249 1.26004799721845 0.999728046701232 0.904536592160594 0.85849832656027 1.26177967902134 1.09524749853671 0.74915832796889 0.980207440530517 1.30586267160470 1.19105976458999 1.00141411195755 0.815880018156096 1.16569113757971 1.46852749408740 0.90537728067321 1.03138328143815 1.28452025796469 0.749345273348454 0.183099197522457 0.187726012697244 0.178034643609819 0.193946760027922 0.182643895237403 0.190390675617570 0.193859942497752 0.178034643609819 0.191072370207183 0.195372671906942 0.188784026887189 0.186342767154012 0.183830522390868 0.186994001013318 0.182492464160727 0.186145712334168 0.181309618803455 0.181600760703420 0.184744684475127 5 5 + 1059563 1059995 1059791.545 1059503 1060153 + gene protein_coding_gene TRUE TRUE AT5G03930.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03920.1) -0.0653929818097948 -0.667503359193722 0.518743770574987 1 0.266780636479762 2.11037794590395 -0.0653929818097948 0.0934647335210861 AT5G28240_at 0.71428530881406 0.642255549378313 0.892822144024435 1.18759853661724 0.921761466370153 1.34229208239150 0.84006302403664 0.82464860789547 0.742763109986681 1.11877686347972 0.527463282445726 1.13376568002384 0.737299914584169 0.426017355167419 1.01920931311426 0.557127067506914 0.98117737792911 0.834143879115017 0.719018734801473 0.186617540206585 0.186793590533439 0.188256798477237 0.198639250992822 0.189996251791454 0.188622948707388 0.188248381419547 0.198546156978407 0.191249800776868 0.190217824554574 0.192338273706312 0.185050841916022 0.191906765983687 0.188769891925416 0.189307328523694 0.185050841916022 0.195278288762493 0.186320066272819 0.188290656719715 5 5|0 +|/ 10216272 10216750 10216548 10216257 10216787 + gene protein_coding_gene TRUE TRUE AT5G28240.1 similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35770.1) 0.064504177496261 0.667358841337435 0.518832467785583 1 0.266686728469229 1.73932169985352 0.064504177496261 0.0897826894357955 AT5G07910_at 7.56636020304027 7.90443801324725 8.77736685463843 8.70364903314244 8.47334108701894 8.70078094349325 7.67811327769571 7.83171913059744 6.64736180597979 6.53964167992314 7.67481956511614 7.31445486567548 7.59111442055765 7.83694088397749 7.57980667817985 7.76293639870116 7.56432000683343 7.50087543548117 6.20745437368557 0.189582452202733 0.192662662036660 0.191927388566983 0.190440055289521 0.189582452202733 0.194224629017013 0.189698335531322 0.199653169477738 0.210579680288651 0.209168414156289 0.195199078172526 0.197922650732041 0.192903510289503 0.203820085071505 0.196854830009014 0.189582452202733 0.202206679148350 0.207063734059764 0.205103946802305 5 5|0 -|/ 2522361 2523022 2522722.333 2521535 2524202 - gene protein_coding_gene TRUE TRUE AT5G07910.1 leucine-rich repeat family protein similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G30100.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94607.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591) 0.0615248613410828 0.667200508151357 0.518929654409838 1 0.266583864547258 15.2384599770316 0.0615248613410828 0.0764295622611009 AT5G06940_at 0.591080327190673 0.421999923023959 0.293467621205534 0.571913211016623 1.12074260314065 0.991153343623325 0.300303062920218 0.668588929644999 1.06594314174162 0.5437720914683 0.774516986947251 1.12910073404977 0.804025134252277 1.02321785793648 1.08758134967716 0.813012911520647 1.03445768696440 0.775068559675596 1.21002648715238 0.229468648350173 0.236101273570206 0.234343334068023 0.235326852197412 0.236634133892559 0.234268453819184 0.230909826125176 0.234316053094113 0.232119119120474 0.230737741879017 0.231845049024705 0.226196020259064 0.231387521305128 0.232558528336175 0.223721406492721 0.224539048898390 0.235510124050140 0.246028996935447 0.237989569102108 5 5|0 -|/ 2148088 2148717 2148430.2 2148079 2150772 - gene protein_coding_gene TRUE TRUE AT5G06940.1 leucine-rich repeat family protein similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to H0305E08.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67431.1); similar to Os04g0472500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053062.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0640405096664295 0.666865660558242 0.519135223006232 1 0.266366398383305 1.55492440742844 0.0640405096664295 0.0879941675350828 AT5G15570_at 3.78576940927128 4.1572958514824 5.3050969448555 5.19965650296829 5.49575107960524 5.04442945878941 4.16155605481112 4.48253268936710 3.73683075249558 3.77533622769611 4.15112473477489 4.52726719618065 4.0968122852743 4.60833998624754 4.32739896682935 4.57848409044394 4.81137608390792 4.39831857435025 3.74949207763729 0.203386596245615 0.193703486248483 0.193308006591644 0.196166050420255 0.197013236330775 0.201267787602914 0.192644548324470 0.198717761328265 0.206232183175916 0.192046346158057 0.196881075875331 0.191950459392225 0.199380238082373 0.191511868030100 0.191511868030100 0.195439100960976 0.203155155941398 0.191511868030100 0.199779363747990 5 5 + 5067501 5067855 5067684.909 5066854 5067999 + gene protein_coding_gene TRUE TRUE AT5G15570.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02160.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96923.1); contains InterPro domain Bromodomain transcription factor; (InterPro:IPR006565); contains InterPro domain Histone-fold; (InterPro:IPR009072) 0.0713602001291969 0.66671053370918 0.519230474345607 1 0.266265685330858 8.79964929507417 0.0713602001291969 0.116842888614911 AT5G11640_at 6.09515337990271 6.21829225462556 6.85519601245857 6.53573360816665 7.75940749944698 6.60469621597945 7.12177408566782 6.29455183358062 5.49513521557637 5.86508310116808 7.27863846114022 7.2311554312193 6.72159036305234 6.95869773198952 7.17426810203875 6.55058867694213 6.54561784040975 6.84001426414023 5.31669239692913 0.246391137195207 0.242591844237497 0.244997301518769 0.249742316341636 0.246796090674251 0.250248394199238 0.249334893398060 0.246076401334090 0.251663667374309 0.245746402058437 0.24760246194805 0.245193311406596 0.241723186532486 0.248957560280917 0.241769557004943 0.23983932400303 0.23983932400303 0.255244712145200 0.256169905147663 5 5|0 +|/ 3742173 3743661 3742862.25 3741997 3743980 + gene protein_coding_gene TRUE TRUE AT5G11640.1 similar to Thioredoxin-like protein (ISS) [Ostreococcus tauri] (GB:CAL50184.1); similar to Os01g0200400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042316.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.116351382216095 -0.666607807308168 0.519293556338513 1 0.266199004017326 12.9213714096074 -0.116351382216095 0.252853781891702 AT5G43070_at 3.43746125696958 3.49289204084859 3.57383153157797 3.69766483634352 3.73335061376474 4.13285641919554 3.72181491654852 3.64071692689759 3.41916629225601 2.90118918963897 4.45123523921163 4.52235331711177 3.86609375477786 3.94043169564537 4.73890917318527 3.75517940060236 3.86528501327172 4.1382511357604 3.23229013033991 0.192567466048140 0.192458761967346 0.195936433230158 0.192965527703731 0.193069771189729 0.193093609580116 0.190692172893190 0.194326801792539 0.193756256536850 0.194157932469471 0.198539431480169 0.192101312335875 0.201878417685802 0.190808550838450 0.186694181271124 0.186694181271124 0.194743126888895 0.186694181271124 0.195326094196992 5 5 - 17306549 17306921 17306753.091 17306328 17307004 - gene protein_coding_gene TRUE TRUE AT5G43070.1 WPP1 (WPP domain protein 1) similar to WPP2 (WPP domain protein 2) [Arabidopsis thaliana] (TAIR:AT1G47200.1); similar to MFP1 attachment factor 1 [Lycopersicon esculentum] (GB:AAF63657.1) -0.0609306956411215 -0.665409335815461 0.520029846159826 1 0.265421751071608 7.3507898404053 -0.0609306956411215 0.0743509040832856 AT5G52400_at 1.12521622890789 1.54782052939797 1.98076610912256 1.50435737381916 1.62524835563485 1.51312005307904 1.77183820614786 1.60224111012668 1.55011090271427 1.79679589359046 1.83437261423461 1.45397504217514 1.71519210199939 1.54182706241081 1.60593986038362 1.47700548706747 2.06163929084121 1.68985353841825 1.81135544266596 0.202477907580875 0.202477907580875 0.205715060231545 0.210291367840320 0.204396945699392 0.205372729516482 0.203946482076421 0.203063685590097 0.214702488773167 0.213088735756179 0.205307490590299 0.206463577070173 0.211820202472182 0.210475626803924 0.207682859158482 0.206216566541306 0.217415742228567 0.206739676231019 0.206436805635577 5 5 + 21291608 21292707 21292367.909 21290175 21292735 + gene protein_coding_gene TRUE TRUE AT5G52400.1 CYP715A1 (cytochrome P450, family 715, subfamily A, polypeptide 1); oxygen binding member of CYP715A similar to CYP735A1 (cytochrome P450, family 735, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G38450.1); similar to Cytochrome P450 [Medicago truncatula] (GB:ABE89900.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0708741475406804 -0.665124391157155 0.520204994839305 1 0.265237142009596 3.27977418128694 -0.0708741475406804 0.115687477539256 AT5G61230_at 9.23865624369385 9.17494778526877 9.86136995619418 9.8688916127706 10.1565853198843 9.9829370900347 8.8964135892924 9.01327606654208 9.1766751616494 9.12619415759647 10.0751781954842 9.73172042952953 9.84003864960877 9.88866406585784 9.7841866338411 9.94565005856772 9.90722803293412 9.6757797876214 9.3167713505344 0.0971302451367694 0.092120008762462 0.0926920962723957 0.0933124510339552 0.0932991520611991 0.095347467277535 0.0944573430967644 0.0960017116116463 0.100331183489857 0.0980262521022014 0.0955451539946977 0.0948319436497213 0.096196493121278 0.0976324165222976 0.0948540212714236 0.0951752659662344 0.0974929744249415 0.097030009495657 0.0937577881686993 5 5 + 24645555 24645978 24645764.636 24644413 24646174 + gene protein_coding_gene TRUE TRUE AT5G61230.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G07840.1); similar to ankyrin 2,3/unc44 [Aedes aegypti] (GB:EAT33004.1); similar to Os02g0102600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045598.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.0548704230123012 0.663569747657428 0.521161211158998 1 0.264231197275026 19.0554360187638 0.0548704230123012 0.0378850965324520 AT5G51620_at 5.75807829997127 6.5130965536247 7.4791218630236 7.3151645617725 7.34635960599364 7.12310800536998 4.97268468687926 5.78460836342373 6.5648719169043 6.36618262080678 7.59647776919809 7.63000210960276 6.78385322023607 7.57828241006519 7.06459554442276 7.53319208157696 6.39538994138508 7.20451603602173 6.5774831434363 0.25331981834704 0.238433005150735 0.232355361671274 0.237921766447654 0.241898836629774 0.235626972363585 0.249577727614770 0.249579454209171 0.232774530162064 0.241388528556936 0.237468234554777 0.232355361671274 0.236961778023650 0.241301888818999 0.250978500210414 0.234968482992371 0.269934911018490 0.233543561709594 0.244857903167828 5 5 + 20985177 20985317 20985242.25 20984272 20985478 + gene protein_coding_gene TRUE TRUE AT5G51620.1|AT5G51620.2|AT5G51620.3 Identical to UPF0172 protein At5g55940 [Arabidopsis Thaliana] (GB:Q9FG71); similar to EMB2731 (EMBRYO DEFECTIVE 2731) [Arabidopsis thaliana] (TAIR:AT5G55940.1); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366)|similar to EMB2731 (EMBRYO DEFECTIVE 2731) [Arabidopsis thaliana] (TAIR:AT5G55940.1); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366) 0.0958371714287611 0.660069206561852 0.523318087851861 1 0.261974025314650 13.3995950088970 0.0958371714287611 0.197767176729289 AT5G19710_at 1.20195773276531 1.54862831661935 1.26168699449069 1.60795990040118 1.22653777658649 1.19014586697877 0.787557990015845 1.25541138258696 1.06532707951357 1.23754789385266 0.928241736078751 1.82323406888727 1.22950805595945 1.32219983686649 1.30495281695292 1.22709750656586 1.20023732898763 1.55643777979736 1.12256223550615 0.185253420112093 0.183609739109091 0.188395242661678 0.186991872548324 0.187582571469946 0.184246853451233 0.186239095511341 0.189990825074727 0.188419257978832 0.183609739109091 0.194639613672210 0.18789146879877 0.200899854442102 0.191136744057043 0.185255986555387 0.186718241565504 0.188886878129581 0.187842953603052 0.183957546011149 5 5|0 -|/ 6664763 6666081 6665299.375 6664747 6666109 - gene protein_coding_gene TRUE TRUE AT5G19710.1 similar to AHP4 (HPT PHOSPHOTRANSMITTER 4), histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups [Arabidopsis thaliana] (TAIR:AT3G16360.1) 0.0706708238440129 0.658829242582546 0.524083356876047 1 0.261177108628232 2.49288626716529 0.0706708238440129 0.117409215279294 AT5G19700_at 2.03510020113182 1.47472600649591 1.90046611309103 1.8844949830536 1.87653730698730 2.02591567522645 2.07825985303186 1.86367590577048 2.37962493968800 1.89843520617017 2.38783572137161 1.78302119408039 1.90692341937496 2.10086230163099 2.33991444471597 2.09250535326442 2.44640889487387 2.11754996905013 1.74853407450102 0.214363939191218 0.210141211094542 0.217578141924881 0.211643017370885 0.215789164902181 0.22246150206247 0.213076026285014 0.216500762760266 0.211537795964144 0.215431664894967 0.227078385241201 0.210141211094542 0.21370568597037 0.215230860982442 0.215366761963787 0.212208505474656 0.213223652836460 0.212912780946948 0.210526974713078 5 5 - 6660825 6661397 6661148.091 6660823 6662349 - gene protein_coding_gene TRUE TRUE AT5G19700.1 MATE efflux protein-related similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G29140.1); similar to putative NIC2 [Oryza sativa (japonica cultivar-group)] (GB:BAD54145.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) -0.0678675033909831 -0.658349063382252 0.524379885909873 1 0.260868869068398 3.97026820680607 -0.0678675033909831 0.107047211970092 AT5G39420_at 1.59116173946479 1.79467156345919 1.83174297371913 1.73254497423757 1.34360987178860 1.40017772892757 1.22816144915497 1.63385367516918 1.90446298945467 0.7432705108198 1.91199888495669 1.72731217637664 1.92186028966932 1.83560492989371 1.44155066672846 1.43212840490213 1.97561638637467 1.76295310431197 1.60541280074715 0.204313609394011 0.198769703467122 0.199486857347919 0.194781716989763 0.202654347592534 0.197759099232577 0.198602021422496 0.204894816621395 0.208343568309765 0.197300038182134 0.194781716989763 0.206829613160784 0.206559918660991 0.200742098805587 0.194781716989763 0.208141254490671 0.201296043460468 0.204476301463148 0.206768550391593 5 5 + 15790926 15792005 15791572.5 15789308 15792399 + gene protein_coding_gene TRUE TRUE AT5G39420.1 CDC2CAT (ARABIDOPSIS THALIANA CDC2C); kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G01085.1); similar to Protein kinase [Medicago truncatula] (GB:ABE79143.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0616066051940838 0.657667132255544 0.52480117388005 1 0.260431473303050 3.15391226652791 0.0616066051940838 0.0809930208081864 AT5G63930_at 3.33438545143243 3.39108004347023 3.27075637995339 3.64218792607479 4.13143196983731 3.9240818860368 2.39398850746285 2.77426554856232 3.45544734078072 3.14779181927077 3.61914782475192 4.17015144825796 4.20362173932311 4.01510233113003 3.79884878528964 4.48958593770049 3.45950008701046 3.84485485969724 3.5547028573361 0.217165358278554 0.207846347333132 0.204441143276260 0.210773672690054 0.203634442632150 0.21171270475175 0.218369485173294 0.205759106771275 0.224368395674099 0.208617113129466 0.203813356703467 0.211187501474242 0.203634442632150 0.212844966302463 0.207452921231663 0.207833624341021 0.208613687556312 0.205194277749545 0.205070749866001 5 5 + 25602956 25603501 25603221.545 25600232 25603725 + gene protein_coding_gene TRUE TRUE AT5G63930.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G33170.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G34110.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G17230.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to Receptor-like protein kinase precursor (GB:P93194); similar to putative LRR receptor-like kinase [Oryza sativa (japonica cultivar-group)] (GB:BAC84715.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0657086951518403 0.656519202032423 0.525510798656144 1 0.259696119803209 7.02581336365758 0.0657086951518403 0.0992284570420732 AT5G56480_at 2.24408828481548 2.53090634469914 2.55871139913202 3.05898061787302 2.53730294216254 2.98031105148736 2.50740720907349 2.26018108391103 2.66434124292567 2.53933039761957 3.07087950396585 2.30236469737634 2.78951543386474 2.35170000617448 2.67213073922741 2.45553539159170 2.64129462192577 2.94068769298917 2.56313106357485 0.21097683846197 0.211926708641549 0.203373909726651 0.202717189624547 0.205537194671348 0.211736988879651 0.200933503075342 0.205871870341488 0.206950610667602 0.206963894580121 0.205923588551686 0.208482187441484 0.204912553809118 0.214838365428715 0.207480483516487 0.202458574831584 0.206171556333037 0.214318052760254 0.224646133497372 5 5|0 -|/ 22887555 22888008 22887838.5 22887552 22888043 - gene protein_coding_gene TRUE TRUE AT5G56480.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT1G32280.1); similar to unknown [Setaria italica] (GB:AAP93138.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.0747290162405545 -0.65608071485307 0.525782010153532 1 0.259415539556084 5.20570998944232 -0.0747290162405545 0.132915764509091 AT5G44270_at 1.57165356567383 1.29373903553406 1.25485522290891 1.38824074192292 1.10737000023929 1.18704409750289 1.30894769550977 1.55044258554714 1.11740745056987 1.56726227067529 1.79476278773373 1.39808034890517 1.61605863876865 1.59993591575336 1.35285706367061 1.45254297136276 1.38366655740131 1.25667611924984 0.985444265840408 0.191273331946107 0.189947999488709 0.189399342694346 0.191127729573472 0.192221607901589 0.188050589559837 0.195354324335616 0.188050589559837 0.189555448758505 0.200303061669945 0.188050589559837 0.192911109208241 0.188050589559837 0.188836649819750 0.188050589559837 0.188050589559837 0.195526503494714 0.192577224986332 0.191361372925366 5 0|5 /|+ 17851922 17852936 17852338.667 17850863 17852967 + gene protein_coding_gene TRUE TRUE AT5G44270.1 similar to targeting protein-related [Arabidopsis thaliana] (TAIR:AT1G03780.2); similar to Targeting protein for Xklp2 containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94613.1); similar to EGF-like [Medicago truncatula] (GB:ABE89479.1); similar to Os03g0212600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049356.1); contains InterPro domain Targeting for Xklp2; (InterPro:IPR009675) -0.0589681222575881 -0.655079815019317 0.526401390520045 1 0.258775724799849 2.68538355779695 -0.0589681222575881 0.069156057557258 AT5G23380_at 3.73351241263237 3.80046528421735 3.80757073806044 4.06089365319042 4.28859852435017 4.40730319871785 2.67747007441475 2.78630100101786 2.84625189058834 3.49111867165791 3.75906326015311 3.56734868046807 3.64004306698594 4.22615574098698 3.51755548238548 3.65300004774476 3.58244640161682 3.4040143386828 3.87047010900896 0.227023762560172 0.220183312068570 0.227105014904259 0.224883729086238 0.232678348460497 0.221477850872925 0.231143270009367 0.230071465167719 0.228601869536484 0.224334145921507 0.218313895740131 0.227095025296007 0.219631731977281 0.218313895740131 0.228040414338004 0.221344021010331 0.219453325016644 0.229522876101096 0.224453852815591 5 5 + 7868389 7870052 7868991.273 7866745 7870305 + gene protein_coding_gene TRUE TRUE AT5G23380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03610.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO39871.1); similar to Os01g0513400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043182.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAP46235.1); contains InterPro domain Protein of unknown function DUF789; (InterPro:IPR008507) -0.05610627675331 -0.653729831554582 0.527237468846786 1 0.257914180000704 7.23092282805668 -0.05610627675331 0.0532238492473535 AT5G41250_at 1.24141203912702 1.45188516162473 1.41560419660824 1.51738089527171 1.44627780794787 1.64898184432582 1.36143176187997 1.34718560033118 1.63815663545465 1.63801871733307 1.47972948145701 1.24849653978966 1.92139627989794 1.53004938217748 1.51794359073463 1.64006606228334 1.49698234001596 1.8386788762991 1.00011541221785 0.216313507266563 0.214381277667377 0.215369017010251 0.219614080146660 0.214119460947154 0.215240940286965 0.212550610359099 0.206529645391053 0.229496523297288 0.213888438513547 0.208854544994897 0.208918864571953 0.211495462688913 0.211754891086286 0.231075160029272 0.206529645391053 0.215479241773759 0.213385106563656 0.213630868179166 5 5 - 16518543 16519000 16518807.818 16518445 16520130 - gene protein_coding_gene TRUE TRUE AT5G41250.1 exostosin family protein similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G63450.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17348.1); similar to Os03g0144500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048944.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) 0.0561253515632992 0.653270084185159 0.527522379136306 1 0.257621146110086 2.93356895043144 0.0561253515632992 0.0536048689492862 AT5G16830_at 8.50721678662476 8.7165134687456 9.65874911273532 9.7099438567415 9.85212188620177 9.83995940071067 8.88782333608882 9.26616423722413 8.75347513004793 8.6955928693774 9.5738614993071 9.27988818105144 9.6377137498304 9.43290317988048 9.22711464956402 9.6050256358813 9.49174588130381 9.30753767720518 8.79146516617251 0.133687772200414 0.129285933008541 0.132172610665749 0.132804084005370 0.132571201563870 0.132918479992217 0.135731140130342 0.132633919469227 0.152465541915960 0.150358817541267 0.135789473334348 0.131922002799791 0.129384192200804 0.130972549402223 0.131169100948537 0.128632727890284 0.133498530206371 0.146905247645844 0.138881863539313 5 5|0 -|/ 5533090 5534504 5533603.7 5532849 5535255 - gene protein_coding_gene TRUE TRUE AT5G16830.1 SYP21 (syntaxin 21); t-SNARE member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane. Identical to Syntaxin-21 (AtSYP21) (PEP12 homolog) (AtPEP12) (aPEP12) (SYP21) [Arabidopsis Thaliana] (GB:Q39233); similar to VAM3 (syntaxin 22), t-SNARE [Arabidopsis thaliana] (TAIR:AT5G46860.1); similar to syntaxin [Glycine max] (GB:AAN03474.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) 0.059968899454446 0.652650757959247 0.527906324462953 1 0.257226698617604 18.4004706082769 0.059968899454446 0.075376335577363 AT5G58340_at 4.01006480710912 4.24150206039554 5.58898968267409 5.32057261102668 4.8849890052778 6.261019920452 4.77305686032663 4.86498937882314 5.08889914223033 4.81251767740105 5.40920401903548 5.868433129199 5.53808639509242 5.75158820731168 4.93038328082768 6.18329387670513 5.80271315275689 5.37110375468985 5.03932795632599 0.263640960197929 0.280271145427839 0.247315157142052 0.278951159535376 0.257265978069081 0.266720121468576 0.247315157142052 0.266945575706582 0.264996690577667 0.256291871947561 0.258206084613897 0.253173381961292 0.25457410022467 0.257596868982449 0.256869827341774 0.257233601366376 0.255120173428821 0.249891446134494 0.254534781919255 5 5 + 23600744 23601306 23600944.375 23599721 23601638 + gene protein_coding_gene TRUE TRUE AT5G58340.1 DNA binding similar to TRFL5 (TRF-LIKE 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G15720.1); similar to terminal acidic SANT 1 [Zea mays] (GB:AAV28560.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.111612718511012 -0.652608839354965 0.52793231739984 1 0.257200013147261 10.2866975335630 -0.111612718511012 0.246414503700157 AT5G12040_at 8.59709999000967 8.85103936465999 9.37131107241191 9.59241985772825 9.31366383152199 9.11763704780739 8.97410348637831 8.89010728380895 8.46177441562314 8.72697294410628 9.7676318545044 9.96308727968633 9.58590112175976 9.71791756393487 9.8283354796585 9.79213564000063 9.59857794387047 9.7385495161409 8.73043268286038 0.145897026151332 0.134033332112372 0.144537330381824 0.130268865645676 0.135371576231847 0.145247271415166 0.135756959823177 0.135387908154849 0.160690657727412 0.136076792985201 0.135425768628043 0.133509498331772 0.131986243182001 0.130997906381135 0.133490162419528 0.135109809761589 0.141115640239531 0.141100019532647 0.139891342870905 5 5|0 +|/ 3885952 3887747 3887139.875 3885069 3888078 + gene protein_coding_gene TRUE TRUE AT5G12040.1|AT5G12040.2 carbon-nitrogen hydrolase family protein similar to nitrilase, putative [Arabidopsis thaliana] (TAIR:AT4G08790.1); similar to Os03g0175600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049134.1); similar to nitrilase family, member 2 [Homo sapiens] (GB:NP_064587.1); similar to Os06g0206000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057093.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010)|similar to nitrilase, putative [Arabidopsis thaliana] (TAIR:AT4G08790.1); similar to Os03g0175600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049134.1); similar to putative Nit protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD36201.1); similar to Os06g0206000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057093.1); contains InterPro domain Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; (InterPro:IPR003010) 0.0586437059182972 0.651858389289411 0.528397783919933 1 0.256722541040668 18.2827946071947 0.0586437059182972 0.0689739887867694 AT5G49760_at 9.89100185222512 9.89084284871085 10.5036815226648 10.4049798880108 10.2289607375486 10.0107469051902 8.69407458935361 8.58008455112242 9.826178725046 9.51540996238752 10.3529043700053 10.5050988765866 10.2278806062188 10.2751536037036 9.7517987629026 10.0584611772817 9.84620236055867 10.0663319332477 9.72079257323234 0.0960268628849506 0.0965273196051275 0.0968651128204776 0.100177133496549 0.0986017489318707 0.0957065537453346 0.094857174402332 0.095556380520541 0.113479364127504 0.099522515656337 0.0975861871527608 0.0986288326364099 0.0998622701337818 0.100510110537146 0.0990517294146705 0.096446948732394 0.0988602647853775 0.0997176203511015 0.0987693895987313 5 5 + 20237684 20238440 20238067.727 20233598 20238525 + gene protein_coding_gene TRUE TRUE AT5G49760.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79620.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49770.1); similar to Protein kinase [Medicago truncatula] (GB:ABE93732.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to putative receptor-like protein kinase 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD82283.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.054692494119881 0.649469077366577 0.529881349793091 1 0.255205703640061 19.6870163026208 0.054692494119881 0.0459012753788889 AT5G21160_at 6.65803562467644 7.00414473062784 7.20912780195564 7.72287193260796 7.44863809016373 7.88923028323895 4.97360719553612 6.33387771559096 5.70047376351441 5.56596713111749 6.7378534800279 7.00342018955572 6.61412599958855 6.62930908368603 7.39968399093702 6.76490961219092 6.09520506065649 6.74801239703369 5.96573863113517 0.211316081775627 0.211927884838598 0.208615228584824 0.213669907686917 0.216995407289240 0.226464420499595 0.208615228584824 0.211435340959233 0.221544280436054 0.223622492839750 0.209594313389461 0.214364381577255 0.208615228584824 0.212671377947818 0.208615228584824 0.208615228584824 0.218068923500976 0.217536217225752 0.215861637037938 5 5 - 7199286 7200389 7199984.182 7198744 7204093 - gene protein_coding_gene TRUE TRUE AT5G21160.1 La domain-containing protein / proline-rich family protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G35890.1); similar to la related protein -like [Oryza sativa (japonica cultivar-group)] (GB:BAD81188.1); similar to Os01g0266000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042674.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630) 0.119165394549765 0.648310731740597 0.530601460116932 1 0.254472176106278 13.1515040811157 0.119165394549765 0.269664587204091 AT5G23290_at 6.29878978762524 6.938682746151 6.89132358531736 7.1870403917699 7.66400886446688 6.74682160463416 5.89358035391282 5.8798847326377 5.12298969696669 4.79675208450321 6.69371943897019 7.07078232232996 6.00482938069915 6.33795274498272 6.57914122471367 5.8759422949398 5.5149051854976 5.98752591100903 4.66842809677079 0.270039107835265 0.266506270223273 0.270528117876463 0.271277053612128 0.266005924616631 0.289934178090602 0.265696292546332 0.266238772407337 0.274459253932973 0.283897859676333 0.265696292546332 0.265909078509679 0.267218256814400 0.274919025631088 0.271554074529152 0.265696292546332 0.275578891811770 0.278646122741563 0.277010743946235 5 5|0 +|/ 7846147 7847403 7846602.625 7846084 7847646 + gene protein_coding_gene TRUE TRUE AT5G23290.1 c-myc binding protein, putative / prefoldin, putative Identical to Probable prefoldin subunit 5 [Arabidopsis Thaliana] (GB:P57742); similar to putative c-myc binding protein [Oryza sativa] (GB:AAL31068.1); contains InterPro domain Prefoldin alpha subunit; (InterPro:IPR011599); contains InterPro domain Prefoldin; (InterPro:IPR009053); contains InterPro domain Prefoldin alpha-like; (InterPro:IPR004127) 0.0948931897793608 0.647965588315341 0.530816136054011 1 0.254253844935086 12.2479280611342 0.0948931897793608 0.200200497664187 AT5G63920_at 1.71123207656397 1.84608584513377 1.97934809397448 2.11783979156296 1.49059540162560 1.56156889479934 1.56157406599622 2.11697753530199 2.12989258057833 2.18451215385886 2.12695438482844 2.43189467681577 2.35482265460256 2.153955060205 2.99737355599225 2.24628862849724 2.06211751417812 2.44256742409426 2.04062732668545 0.224570912793258 0.232810886639546 0.230033527667574 0.237925766527369 0.231775077335675 0.232378273137131 0.238215505873968 0.228898377425995 0.232499597988871 0.227065617823560 0.229884668645194 0.232226655958176 0.229988253779705 0.226802412305798 0.235185141344959 0.229525199076422 0.243531075624858 0.231539469218023 0.235120034121052 5 5 + 25597461 25598394 25597982.636 25591714 25598504 + gene protein_coding_gene TRUE TRUE AT5G63920.1 DNA topoisomerase III alpha, putative similar to DNA topoisomerase family protein [Arabidopsis thaliana] (TAIR:AT2G32000.1); similar to DNA topoisomerase III (GB:AAB03695.1); similar to topoisomerase (DNA) III alpha [Homo sapiens] (GB:NP_004609.1); similar to Putative DNA topoisomerase III [Oryza sativa (japonica cultivar-group)] (GB:AAM15783.1); contains InterPro domain DNA topoisomerase, type IA, DNA-binding; (InterPro:IPR003602); contains InterPro domain DNA topoisomerase, type IA, zn finger; (InterPro:IPR013498); contains InterPro domain DNA topoisomerase, type IA, central; (InterPro:IPR013497); contains InterPro domain TOPRIM; (InterPro:IPR006171); contains InterPro domain DNA topoisomerase, type IA, domain 2; (InterPro:IPR003601); contains InterPro domain DNA topoisomerase, type IA; (InterPro:IPR000380); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain Toprim subdomain; (InterPro:IPR006154); contains InterPro domain Zinc finger, GRF-type; (InterPro:IPR010666) -0.0654352481742104 -0.64577362673113 0.53218069473657 1 0.25286974397167 4.03332309200775 -0.0654352481742104 0.102508523603410 AT5G02820_at 5.36128164821791 5.76620904475486 5.64283693928901 5.79297804467078 6.29921607196527 5.85431181497733 4.5395859875819 4.89218008810308 4.75838767873318 4.12660602705574 5.81469964485477 6.3746050351229 5.99447107609885 6.04974553864312 5.81535580833302 6.27831561358549 4.93072300874806 5.74715741158146 4.76806230778307 0.259003168760331 0.250415502412264 0.268313286535703 0.252598992466778 0.262603504555072 0.255718189010296 0.25867335673538 0.252377825580195 0.257776723559918 0.262228983871841 0.255443203108696 0.250415502412264 0.250558212028433 0.270679930699173 0.255098469933813 0.251687522163965 0.269101192560923 0.255394899510451 0.265952931587825 5 5 + 643533 644097 643810.545 642556 644392 + gene protein_coding_gene TRUE TRUE AT5G02820.1 RHL2 (ROOT HAIRLESS 2); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication similar to DNA topoisomerase VIA (SPO11-1) [Arabidopsis thaliana] (TAIR:AT3G13170.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAO17008.1); similar to Os03g0284800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049765.1); contains InterPro domain Spo11/DNA topoisomerase VI, subunit A, N-terminal; (InterPro:IPR013049); contains InterPro domain DNA topoisomerase VI, subunit A; (InterPro:IPR004085); contains InterPro domain Spo11/DNA topoisomerase VI, subunit A; (InterPro:IPR002815); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.070764570319412 0.64451186235923 0.532967102367825 1 0.25207496436113 10.7319013616008 0.070764570319412 0.123436744453357 AT5G35320_at 4.15943929108159 5.13062124491829 5.19620945742098 5.33853586402491 5.84526379109781 5.6203070502422 4.39566074222840 4.73238861505624 4.14377151955925 3.49436137924291 4.4544443329015 4.41135062716443 4.77740026678065 4.50668960475473 4.29684976297497 4.61219264278013 4.70604457176887 4.56460454229574 3.98535867528772 0.219400386331899 0.219346036047025 0.223301564436336 0.236905516724247 0.222974206660325 0.220968564588427 0.217899827824439 0.216786042109413 0.227251497559109 0.218505547957282 0.214963435806462 0.215546394622617 0.214136135734864 0.217673927927039 0.218216205591232 0.214011842517368 0.223950007709 0.214011842517368 0.221703081400559 5 0|5 /|+ 13539436 13540324 13540047.9 13539009 13540655 + gene protein_coding_gene TRUE TRUE AT5G35320.1 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE90606.1) -0.088709215870751 -0.642560779954524 0.534184460859485 1 0.250848799089866 9.26015037465426 -0.088709215870751 0.183751328469613 AT5G10240_at 3.79839639436747 4.3590958396067 4.74871337712464 4.91076280759968 4.80494656524045 4.913498928999 4.64115236634495 4.67703735693246 4.22764090401934 4.44893603113261 5.45107929606399 6.09879193723507 5.3651739812713 5.46451173467161 6.24893714602911 5.6790217419707 5.84131849784943 5.61687497959473 4.85573388887465 0.197007048140431 0.192363632930878 0.195162042798723 0.199231381082448 0.192168732178015 0.196553423721144 0.198006528523979 0.192557119104783 0.198333364666175 0.196210223167155 0.201264294958921 0.200011025870942 0.193166561017529 0.203791469605465 0.194181685897553 0.19733554243237 0.196441955715119 0.192197023607652 0.195618988802333 5 5|0 -|/ 3212935 3213965 3213313.333 3212689 3216467 - gene protein_coding_gene TRUE TRUE AT5G10240.1|AT5G10240.2 ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) Encodes asparagine synthetase (ASN3). similar to ASN1 (DARK INDUCIBLE 6) [Arabidopsis thaliana] (TAIR:AT3G47340.1); similar to ASN2 (ASPARAGINE SYNTHETASE 2), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G65010.1); similar to aspara (GB:CAJ43590.1); similar to 52O08_30 [Brassica rapa subsp. pekinensis] (GB:AAZ67575.1); similar to 117M18_15 [Brassica rapa] (GB:AAZ66934.1); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Asparagine synthase, glutamine-hydrolyzing; (InterPro:IPR006426); contains InterPro domain Asparagine synthase; (InterPro:IPR001962) -0.0650156034263245 -0.640630072146138 0.535390690476066 1 0.249638803299209 9.72244242403256 -0.0650156034263245 0.102922467676585 AT5G61605_at 1.3474837704401 1.33376315613761 1.530915190851 1.78908167078595 1.27693435432829 1.36217613354597 1.2792071574808 1.23526768321205 1.45406433804939 1.68302233592654 1.35047824869650 1.75896228832301 1.52361415190555 1.48946399704985 1.32465227184913 1.48742569849665 1.63694732484436 1.59496845055235 1.70514838140347 0.207231148188606 0.202223721834041 0.201044276497876 0.204287956179554 0.197700826926267 0.202026516380621 0.198103660913084 0.201499800424903 0.197700826926267 0.197774265792187 0.207916211236396 0.203473230394384 0.201943277590748 0.199561923789358 0.20057491084509 0.197700826926267 0.204645528470891 0.201293923843415 0.199671656672917 5 5|0 -|/ 24785857 24786149 24785969.3 24785608 24786236 - gene protein_coding_gene TRUE TRUE AT5G61605.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16505.1) -0.0541412226736098 -0.640026406473393 0.535768159741397 1 0.24926116670338 2.96179984247663 -0.0541412226736098 0.0477188703838689 AT5G49560_at 1.33425505682683 1.04789042383277 1.48721639504985 1.58295750732732 1.24459243115044 1.20126651441944 1.45667763223335 1.04554374632254 1.20467557447044 1.10979219529066 1.10800046133946 1.61041883542831 1.47336959636722 1.12837610752274 1.52840855307145 0.937747651364728 0.814416199033937 1.50928281614488 1.08758144813299 0.196003449413807 0.193436475220468 0.191446078087255 0.193481228154392 0.194628726645502 0.190989075288499 0.191426551388179 0.190126427924688 0.208102493980333 0.194671569583562 0.188590363551663 0.192018915229245 0.196211553352023 0.194234551859666 0.191092587153434 0.190970296737905 0.195671591202571 0.195125110987487 0.199129179104730 5 5 - 20128266 20128762 20128513.091 20128187 20129011 - gene protein_coding_gene TRUE TRUE AT5G49560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G50850.1); similar to hypothetical protein [Neurospora crassa OR74A] (GB:XP_965011.1); similar to conserved hypothetical protein [Neurospora crassa] (GB:CAE76456.1); similar to Os07g0569500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060038.1); contains domain no description (G3D.3.40.50.150); contains domain S-adenosyl-L-methionine-dependent methyltransferases (SSF53335); contains domain UNCHARACTERIZED (PTHR14614:SF3); contains domain UNCHARACTERIZED (PTHR14614) 0.0615837813781678 0.639897763455572 0.535848619476767 1 0.249180733516057 2.49893443014471 0.0615837813781678 0.0885930480479031 AT5G55830_at 1.46659453116411 1.35958224139523 1.52313564293426 1.48506127308561 1.45022861446530 1.50334083761582 1.77985358456283 1.40638706561804 2.02665980383203 1.80386885555048 1.92801976817265 2.02898472723451 2.07503351132725 1.94137444971575 2.45089791720371 2.14430113712023 1.85236128021707 2.00159215662918 1.8477810059243 0.152487080800434 0.161528024834254 0.157642313576014 0.159328188659424 0.155623415095531 0.154876038636061 0.152487080800434 0.164069445021432 0.157441207537747 0.160292450294005 0.161193304295210 0.152487080800434 0.156652756126603 0.159098861662161 0.155491295173718 0.155042918196113 0.159003402541954 0.159071867827395 0.155512337561581 5 5 + 22613417 22613900 22613622.909 22611881 22614069 + gene protein_coding_gene TRUE TRUE AT5G55830.1 lectin protein kinase, putative similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G53380.1); similar to Protein kinase; Concanavalin A-like lectin/glucanase [Medicago truncatula] (GB:ABE83261.1); similar to Os06g0285400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057404.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.0573837458536859 -0.639490867310398 0.536103158491742 1 0.248926422363430 3.46956822729922 -0.0573837458536859 0.0681755073369399 AT5G56020_at 5.6000753606358 5.83597300444381 6.37891492538215 6.67077684827017 7.3853959093748 5.45180956560805 4.96047270924679 5.2153494256925 4.54394814305096 5.02412316784963 6.0863860105808 6.18206704669221 6.19423712073582 6.30199378162551 5.92728737687041 6.39195312389258 5.36726635669543 5.96617015341889 4.91870460434113 0.259400495450707 0.250999007601082 0.25460865889929 0.247203731190722 0.259039536342768 0.272041239451421 0.251575260480196 0.245425232073867 0.259267420201853 0.247068816786595 0.252344879324325 0.245260261243762 0.245260261243762 0.266188552759782 0.263157594523807 0.248705200064338 0.260793395527496 0.256164796185028 0.245260261243762 5 5|0 +|/ 22701952 22703403 22702875.625 22701631 22703595 + gene protein_coding_gene TRUE TRUE AT5G56020.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26550.1); similar to Os06g0300300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057449.1); similar to hypothetical protein cgd6_630 [Cryptosporidium parvum Iowa II] (GB:XP_627442.1); similar to Os06g0608600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058041.1); contains InterPro domain SFT2-like; (InterPro:IPR011691) 0.144147530368217 0.638587808402268 0.536668327726081 1 0.248362539994927 11.3778936817790 0.144147530368217 0.34370195782615 AT5G44150_at 4.67297786065808 4.77819843471008 5.93677655797928 5.37044825701135 6.14307876607718 5.60104842284657 4.78198829180498 4.3489632590852 4.00824328492085 3.98549765379784 5.0006570620162 5.18101403569677 4.88179838221954 5.11853085985371 5.03588100510354 5.11273856155399 4.73735900199921 4.44936033998492 4.25789217642333 0.223561089338747 0.223874844891679 0.235876456239496 0.224479475900843 0.228411666092197 0.237263161900335 0.228185362442134 0.230905141676964 0.226111528359482 0.233804618894416 0.222917690701699 0.222917690701699 0.222917690701699 0.228169899137484 0.228942587651082 0.222917690701699 0.242403825553276 0.239922585124604 0.230518036580526 5 5 - 17781068 17781612 17781351.3 17780910 17782647 - gene protein_coding_gene TRUE TRUE AT5G44150.1 similar to Os05g0564000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056329.1) 0.079270977749524 0.636706953677288 0.537846542209218 1 0.247190463393968 9.715957536822 0.079270977749524 0.156047592939553 AT5G49790_at 0.886190779452114 1.43768795700752 0.9436168205795 1.45116498344300 1.30977246994304 1.08130812727257 0.8116573912299 0.869523928023244 0.924888607096983 1.09706288979156 1.20598631709389 1.04027185886351 1.09258795740661 1.43129466802370 1.25891395082529 1.37450452102449 1.3930669446169 0.575243113713137 1.20239319258089 0.266099409944213 0.259055051991928 0.268473026729282 0.261362395069346 0.253622613846520 0.261273130423871 0.255910655483899 0.267147394945282 0.268370127423014 0.268893883194419 0.259103248162635 0.256482029528195 0.256368396332843 0.257786989375989 0.259917982749351 0.272824467948419 0.259747930986771 0.255588066499048 0.270249086842762 5 5 + 20250372 20250624 20250471.25 20250372 20250737 + gene protein_coding_gene TRUE TRUE AT5G49790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G36010.1); similar to Hypothetical protein CBG16043 [Caenorhabditis briggsae] (GB:CAE69762.1) 0.0733365830284548 0.636296991676839 0.538103550295104 1 0.246935413326114 2.22199792192007 0.0733365830284548 0.135966216449093 AT5G22820_at 3.1538175980417 3.88850586543697 4.31240486778713 5.01902346493363 5.08646250558223 4.71595532300642 3.96013420365081 4.40726745253174 3.39424749164411 3.21519935206968 4.3050820553755 4.16013206823373 4.43563029383763 4.17122727804648 3.60052691896351 4.18738685361173 3.30367537965241 3.74630366237125 3.17350287810589 0.279791860384571 0.269722817642752 0.280867006446937 0.280946057538387 0.275067363921194 0.27453685929179 0.269722817642752 0.269722817642752 0.289508380467206 0.269742900159730 0.269722817642752 0.269722817642752 0.269722817642752 0.278550228450635 0.285320199481177 0.269722817642752 0.284710038116369 0.274025265359403 0.273229056121369 5 5|0 -|/ 7624118 7625172 7624386.5 7623443 7626978 - gene protein_coding_gene TRUE TRUE AT5G22820.1 binding similar to hypothetical protein [Ipomoea trifida] (GB:AAS79588.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.0940226393026322 0.635685478622603 0.538487043511649 1 0.246555253246845 7.94281081230537 0.0940226393026322 0.203019040804349 AT5G46120_at 1.29648074870547 1.19059830332168 1.71335161482295 1.51411764450014 1.40795302313640 1.44816649123524 1.52941688237459 1.55705311018884 1.68100180372551 1.72177631340784 1.64064075679644 1.64674050258697 1.69131086176709 1.77845899389890 1.68046709356507 1.88475645786660 1.58114343201059 1.70162688810823 1.72019656612440 0.196703230603355 0.200401403846616 0.204014656099237 0.204402034817010 0.199139809565053 0.197602757274984 0.200123285788285 0.197504764164145 0.199612356712046 0.201283157103451 0.204424501270601 0.20257621138842 0.197096590015922 0.20164771376764 0.199623630167496 0.19639262279766 0.204846511506762 0.200946381227902 0.19755039330757 5 5 - 18719870 18720058 18719969.273 18719851 18720102 - gene protein_coding_gene TRUE TRUE AT5G46120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05145.1); similar to hypothetical protein 23.t00046 [Brassica oleracea] (GB:ABD65629.1); contains domain REVERSE TRANSCRIPTASES (PTHR19446); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCL19 (PTHR19446:SF30) -0.0527667424888426 -0.635315990216748 0.538718833964826 1 0.246325716103632 3.16129290282445 -0.0527667424888426 0.0399475808764743 AT5G53840_at 1.00813484322228 1.42693508414723 1.44679187420765 2.29175078730238 1.04093123643605 1.54594600094263 1.02431427122475 1.41172987375266 1.11899734858095 1.56659542867949 1.07801093050991 1.19649024544812 1.34014520290788 0.846642093354024 1.42232123631478 1.68216866370540 1.58705912192649 1.83548490375776 1.41450592598124 0.198280801440760 0.201613527358237 0.209645735423056 0.204367327846017 0.196677327327259 0.204576116917568 0.197297855462215 0.201774836898540 0.19973961240095 0.196781072756477 0.205741154228778 0.199039168781762 0.200649245903652 0.195662400689750 0.197012729281102 0.196112332314945 0.197223098768854 0.20941321943496 0.196376855467201 5 5 - 21876375 21877094 21876711.182 21876374 21877898 - gene protein_coding_gene TRUE TRUE AT5G53840.1 F-box family protein (FBL13) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G51370.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE84776.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.09165338660178 0.633214940415044 0.540037971690649 1 0.245022819357732 2.76968668014834 0.09165338660178 0.196893316825105 AT5G07880_at 1.72276912743139 1.26697083554529 2.30874445918260 1.98467119493752 1.93877933704285 1.78173883181031 1.15265041385207 1.74769750683196 1.67664466979290 1.95852829129201 1.55800784668333 1.09321233127718 1.60099676297245 1.30513904408931 1.41436342845138 1.47271514537920 2.17522118969641 1.50095896540148 1.32078559193839 0.197575089596704 0.199281455800116 0.204481065810414 0.199080669519187 0.195286842938397 0.212696661226806 0.195286842938397 0.201818917787594 0.203008239232664 0.20135939102791 0.195605203442967 0.199872231734047 0.19838067738881 0.207633044455611 0.205120192465414 0.198496377974723 0.201427171402905 0.200433982012401 0.203835422653318 5 5|0 -|/ 2515588 2516497 2516031.5 2515588 2516695 - gene protein_coding_gene TRUE TRUE AT5G07880.1 SNAP29 (Synaptosomal-associated protein SNAP25-like 29) member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33. Identical to SNAP25 homologous protein SNAP29 (AtSNAP29) (Synaptosomal-associated protein SNAP25-like 2) (SNAP29) [Arabidopsis Thaliana] (GB:Q9SD96;GB:Q4PSG3); similar to SNAP33 (synaptosomal-associated protein 33), t-SNARE [Arabidopsis thaliana] (TAIR:AT5G61210.1); similar to Os02g0529500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047013.1); similar to SNAP1 [Oryza sativa (japonica cultivar-group)] (GB:AAW82752.1); similar to SNAP-34 [Hordeum vulgare subsp. vulgare] (GB:AAP79417.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain t-snare; (InterPro:IPR010989) 0.0751793845201162 0.632585189995611 0.54043371946476 1 0.24463307518346 3.32153422512172 0.0751793845201162 0.143908072113608 AT5G58590_at 7.58960595986597 7.42910462050343 8.48831583804248 8.54967194057152 8.73697408456551 8.61110458667042 7.55319649766488 7.86867473572001 7.51177108892448 7.85554785540343 8.72038790621519 8.31245019168231 8.73445675805518 8.38106306461564 8.37434761202425 8.56715887742475 8.86466168645941 8.31373064269103 8.1681570901717 0.169234389456936 0.166171160713343 0.173491452296219 0.165395896746284 0.164456648675616 0.184056260337215 0.169850389496112 0.169437474463766 0.180629637707484 0.162429065004153 0.168120959282053 0.160131601067777 0.166150250481714 0.167281789074796 0.159793275490822 0.166216270801874 0.168328125617008 0.163975668434057 0.174246985327995 5 0|5 /|- 23697679 23698357 23698119.333 23697305 23699024 - gene protein_coding_gene TRUE TRUE AT5G58590.1 RANBP1 (RAN BINDING PROTEIN 1) Encodes a Ran-binding protein 1 homolog (RanBP1). Identical to Ran-binding protein 1 homolog c (RANBP1C) [Arabidopsis Thaliana] (GB:P92985;GB:Q9LUZ8); similar to SIRANBP (Ran-binding protein 1a), Ran GTPase binding [Arabidopsis thaliana] (TAIR:AT1G07140.1); similar to unknown [Brassica rapa] (GB:ABB97039.1); contains InterPro domain RanBP1; (InterPro:IPR000156); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) -0.056220802622488 -0.631119585472783 0.541355378428276 1 0.243727416291451 16.2926764182318 -0.056220802622488 0.0658733664225978 AT5G48170_at 0.652753220238292 0.614804735675241 0.971952621896023 0.49470614964432 1.08605278727884 0.776240318122515 0.741752938141887 0.535631287937284 0.854275956223635 0.552270813376851 0.698741643282884 0.9413662014175 0.67267831308149 0.913188218283 0.796839569912397 1.10274385330430 0.579950878585137 1.05975243751849 0.998276948449834 0.217876569090679 0.215216221991124 0.217359104963878 0.220928761070706 0.219924867298585 0.212363110285625 0.215163174315051 0.212363110285625 0.225025199162277 0.223828197455427 0.212363110285625 0.221215740863348 0.228409408476414 0.222058545408152 0.217445437900648 0.214341809649237 0.216153837082668 0.212363110285625 0.215436528496763 5 5 - 19549955 19550341 19550172.364 19549763 19550491 - gene protein_coding_gene TRUE TRUE AT5G48170.1 SLY2 (SLEEPY2) encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism. Identical to F-box protein SNE (Protein SNEEZY) (Sleepy protein 2) (SNE) [Arabidopsis Thaliana] (GB:Q9LUB6); similar to SLY1 (SLEEPY1) [Arabidopsis thaliana] (TAIR:AT4G24210.1); similar to F-box protein GID2 (Gibberellin-insensitive dwarf protein 2) (Protein GIBBERELLIN INSENSITIVE DWARF2) (GB:Q7XAK4); similar to Os03g0196500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049264.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) 0.0644933160054997 0.630663697155297 0.54164225151312 1 0.243446098653469 1.55786953008676 0.0644933160054997 0.104933673372744 AT5G15250_at 1.56589923877552 1.48135814911602 2.09144387040551 2.06182065501029 1.64068102307723 1.92136892841940 1.91731543252369 1.40930871572219 2.03255908504981 1.31266068002307 1.83049205100853 1.81895279198536 1.61538304723603 1.48734026992535 1.70996760612783 1.65298278915923 1.83497844556262 1.91635584533443 1.69301867775296 0.185292938595993 0.184069130525590 0.186134420197336 0.194573583483474 0.184069130525590 0.186928407921646 0.187464425411135 0.191263806592101 0.191108425555204 0.193618426949546 0.187228287337741 0.185943615357961 0.190789126469105 0.184158066594282 0.186312577292652 0.191047826172141 0.190038589436015 0.186572150576415 0.194019703391002 5 5 - 4950482 4951042 4950831.364 4950414 4952780 - gene protein_coding_gene TRUE TRUE AT5G15250.1 ATFTSH6/FTSH6 (FtsH protease 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. similar to FTSH8 (FtsH protease 8), ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G06430.1); similar to VAR2 (VARIEGATED 2), ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G30950.1); similar to Peptidase S26A, signal peptidase I; AAA ATPase; Peptidase M, neutral zinc metallopeptidases, zinc-binding site; Peptidase M41, FtsH extracellular [Medicago truncatula] (GB:ABD32532.1); similar to putative chloroplast protease [Oryza sativa (japonica cultivar-group)] (GB:BAD37263.1); similar to FtsH protease [Solanum lycopersicum] (GB:BAD99306.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain AAA-protein subdomain; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH extracellular; (InterPro:IPR011546); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Peptidase S16, lon protease; (InterPro:IPR001984); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) 0.0636856823682189 0.630594883509835 0.54168556086822 1 0.24340365170482 3.46750921166508 0.0636856823682189 0.101629105536660 AT5G04510_at 6.1826974221141 6.00729466113375 6.90642815082966 6.35433085211301 7.45576631337343 7.19745918146761 6.42159577630137 5.84613498086535 6.65033221111149 6.3051007696195 7.71053686728782 7.72097084900354 7.26710711765669 7.44982113829295 7.62583738582348 7.14464619362577 7.20147730589029 7.15188664945845 6.05911799429508 0.199801426525501 0.193328299521187 0.195806283849571 0.201475499742449 0.187442741229774 0.187804867055884 0.194806250084819 0.193907619038888 0.206160749213318 0.195894936714131 0.190176290725984 0.187442741229774 0.193652583916718 0.192908034683082 0.188957414546590 0.189621613806171 0.193702506210515 0.194916898338334 0.197956846505898 5 5 + 1288860 1289658 1289234 1286908 1289909 + gene protein_coding_gene TRUE TRUE AT5G04510.1|AT5G04510.2 PDK1 (3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); kinase Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation. similar to 3-phosphoinositide-dependent protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G10540.1); similar to 3-phosphoinositide dependent protein kinase 1 [Zea mays] (GB:ABB71956.1); similar to 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (GB:AAW38936.1); similar to Os01g0872800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044948.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to 3-phosphoinositide-dependent protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G10540.1); similar to 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (GB:AAW38936.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0760948915839306 -0.629790631619312 0.542191881134739 1 0.242907874424529 13.4200729656357 -0.0760948915839306 0.148207479311809 AT5G22590_at 0.709758753169391 1.27730988449187 0.971408194674736 1.35080727818708 0.937088893116076 1.54390552828208 1.03654908365569 1.32089980698218 1.54617811963908 1.63944245475433 0.88753221877148 1.28373738412908 1.51674342385381 1.2640930955825 1.4281505453212 1.22653842915904 1.50647896487391 1.43426442272276 1.10361193170101 0.202701416412416 0.209732801823675 0.206543678590508 0.204175229981697 0.204092884664006 0.202758683275662 0.196547486510336 0.200333898419249 0.207082558576289 0.201877578043751 0.212372340557378 0.196547486510336 0.208764709243634 0.201510807161381 0.196547486510336 0.205303302025220 0.205483620694235 0.210408985047122 0.196547486510336 5 5|0 +|/ 7505158 7505814 7505525.3 7504539 7505841 + gene protein_coding_gene TRUE TRUE AT5G22590.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22730.1); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) -0.0812660150673857 -0.629689198131117 0.542255758249044 1 0.24284538767638 2.51755916744482 -0.0812660150673857 0.165549170603230 AT5G11070_at 9.46945605122254 9.62563439641885 9.80633311887898 9.97499938243033 10.5737618121308 10.2163272947018 9.3754062994145 9.41057079525853 9.16470475751798 9.31754974565832 10.2019790728076 9.82239860587792 9.6761623266819 9.91759913513468 9.8707995927903 9.74484532284107 9.5067269940472 9.98913548218208 9.21530595445169 0.101448597159061 0.108885825706601 0.109329879973576 0.108627662556031 0.107957960445167 0.107447334884368 0.105590880785669 0.104594824740713 0.124968008750778 0.104441998290713 0.106583093464098 0.104740039102174 0.103638656881085 0.104100142726669 0.109323599008548 0.101014350215913 0.107372590645802 0.106556397730925 0.104944366049220 5 5 - 3516444 3516874 3516621.364 3516218 3516996 - gene protein_coding_gene TRUE TRUE AT5G11070.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G35090.1) -0.0575112607939234 -0.629237141588924 0.542540490404968 1 0.242567017173912 19.3434241283510 -0.0575112607939234 0.0737943641253999 AT5G61850_at 0.914748488437311 0.614566565294171 0.902658032773257 1.12901381711602 0.859667290663872 0.777081469376716 0.982109925866522 0.729477562613366 0.777865601489387 0.84079797969909 0.768928912044928 0.862907584674664 1.00368480635815 0.84470611510695 1.00229153276065 1.16551535034741 1.18407823058683 1.25924557703419 1.01969693232818 0.204730183409517 0.203943628405315 0.201708874021096 0.212546991171867 0.201708874021096 0.205220756227285 0.203620272123218 0.20832296703734 0.204507725710495 0.210433939912985 0.202764540489584 0.205477654336839 0.218213929283962 0.205990044359737 0.208295797051776 0.213626662953510 0.210738380048527 0.203108509175088 0.211804431947933 5 5 + 24862748 24864101 24863753.273 24861521 24864159 + gene protein_coding_gene TRUE TRUE AT5G61850.1 LFY (LEAFY); transcription factor Encodes transcriptional regulator that promotes the transition to flowering.Involved in floral meristem development. Identical to Protein LEAFY (LFY) [Arabidopsis Thaliana] (GB:Q00958;GB:Q8LSH2;GB:Q8LSH3); similar to LEAFY transcription factor [Brassica juncea] (GB:ABF06559.1); similar to LEAFY-like protein [Leavenworthia crassa] (GB:AAO73067.1); similar to LEAFY-like protein [Ionopsidium acaule] (GB:AAO73066.1); contains InterPro domain Floricaula/leafy protein; (InterPro:IPR002910) 0.0584696646949478 0.627038942285088 0.543926264963117 1 0.241216024548555 1.80910202807754 0.0584696646949478 0.0796784072372921 AT5G25950_at 0.613011551226075 0.587657549769152 0.666593904447585 0.890689413503661 0.455284118356581 0.947201585750906 0.96153027267947 0.704883409421618 1.25687517788176 1.16367189147825 1.08593207005056 0.932660562628147 0.721773030728789 0.965755015135397 0.898228823111986 1.12903393228895 1.48851672800911 1.58272661282092 0.962876765888707 0.222302475902986 0.224265743552924 0.220644701802560 0.221344403302002 0.228024612640562 0.223837301853300 0.220416551306641 0.228239481384940 0.220416551306641 0.223301373727681 0.222947150115396 0.234184769032302 0.225182286822972 0.226766032839026 0.239842266480458 0.225327338043243 0.221821324910427 0.226152715528654 0.228081075367091 5 5|0 -|/ 9057946 9058741 9058303.9 9057932 9059806 - gene protein_coding_gene TRUE TRUE AT5G25950.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25960.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE82472.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.0638009110341784 -0.62694171506601 0.543987604926546 1 0.241156370390455 1.8425496216092 -0.0638009110341784 0.103646890803763 AT5G55490_at 0.317190684650496 0.498795762565323 1.00827995295746 0.583554509257878 1.21235630764353 0.715056408606139 0.911738650305637 0.337542014108019 0.469931299017525 0.997847514651804 0.59964528337589 0.862694317423934 0.616455600349615 0.443951468015312 0.37651320213896 0.672049978447718 0.6936392835902 0.747839955714854 0.723835709754849 0.222074979524544 0.21400993433989 0.219714559393352 0.217148693652069 0.219426133488705 0.219170500886213 0.219462807409897 0.221949219793484 0.228935305202836 0.222265227666816 0.215236328190005 0.218720222615114 0.215137798987715 0.21400993433989 0.223337040500465 0.215771757244845 0.21400993433989 0.219775747669062 0.21400993433989 5 0|5 /|- 22496049 22496752 22496482.75 22495938 22498374 - gene protein_coding_gene TRUE TRUE AT5G55490.1 GEX1 (GAMETE EXPRESSED PROTEIN1) Encodes a transmembrane domain containing protein that is expressed in pollen germ cells. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68790.1); similar to Os07g0668100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060577.1); similar to Os09g0442400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063290.1); similar to hypothetical protein S250_18C08.13 [Sorghum bicolor] (GB:AAL73526.1); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079) 0.0773426072540718 0.626438989780276 0.544304833689014 1 0.240848057476008 1.37663269156520 0.0773426072540718 0.153851443030920 AT5G64813_at 4.57205091807526 4.7685560445244 5.51491808027656 5.29862458164259 6.11231751566322 5.54826186700554 4.63253289830544 4.23016067109981 5.2818256742728 4.69355697139914 5.62011212952707 5.77737598305548 5.98868258896129 5.84051651328862 5.86569313187306 6.05553296188066 5.70559698560495 5.73501841790493 4.55510252451712 0.223445595564897 0.223537280590314 0.228839476116719 0.229789313312174 0.232576698662345 0.234286491760996 0.226098682366506 0.219872785755980 0.232800849549456 0.235188887218953 0.222023025473141 0.2196353871724 0.225277326290100 0.240703945628498 0.221889799919032 0.223365765371293 0.238344448865281 0.218822504370525 0.235836140830493 5 5|0 +|/ 25929017 25929811 25929384.5 25927505 25930122 + gene protein_coding_gene TRUE TRUE AT5G64813.1 GTP-binding protein-related Identical to Putative GTP-binding protein At5g64813 [Arabidopsis Thaliana] (GB:Q9C5J9;GB:Q9LV96); similar to ATP binding / GTP binding / transcription factor binding [Arabidopsis thaliana] (TAIR:AT5G09910.1); similar to Sigma-54 factor, interaction re (GB:ABE87700.1); contains InterPro domain Miro-like; (InterPro:IPR013684); contains InterPro domain Ras GTPase; (InterPro:IPR001806) 0.0705562168921153 0.626162221752144 0.544479524339939 1 0.240678417788492 10.4182083949449 0.0705562168921153 0.130131966794704 AT5G37900_at 0.474937958359501 0.112155466679098 0.952248083209499 0.522285761382512 0.432153938791314 0.62275931928093 0.484165016143487 0.815706955102279 0.713437538341581 0.755883381218637 0.544759538867613 0.682590747358763 0.315195045797755 0.991421841184267 1.05316093239664 0.832139570075692 1.04706261371687 0.99590944875756 0.722806730202572 0.212243573415095 0.202980500484970 0.198572164897134 0.20719750294112 0.199366436109889 0.198572164897134 0.201812517484954 0.208225281817897 0.208600635491869 0.198572164897134 0.211193075345940 0.205801498383217 0.202658963703861 0.199897676482801 0.207457990204751 0.211939292242032 0.201292173301449 0.201577646891621 0.203503357012386 5 0|5 /|- 15111144 15111649 15111438.7 15111133 15112032 - gene protein_coding_gene TRUE TRUE AT5G37900.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) family protein [Arabidopsis thaliana] (TAIR:AT5G37910.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 0.067218067600926 0.62589229038504 0.544649930602207 1 0.240513035178109 1.32129615429707 0.067218067600926 0.117719053705471 AT5G58490_at 8.25562017480984 8.37612530631436 9.34045867025074 9.19513244490357 9.26898172157583 8.92022229023021 8.62528082608329 8.79730502869195 7.75435218238174 8.05515351227847 8.67383074329259 9.05748447939312 8.73092219546853 8.97847093310966 9.10712271025515 8.94222702898846 8.60367461152351 8.82215055987005 7.45448226786422 0.121390024013240 0.119861042949147 0.121110725351827 0.121520690447617 0.118555674330977 0.123519767170421 0.119599273163457 0.122545710773009 0.133221861888575 0.120282899339113 0.125635004958575 0.116797147177324 0.121549236221861 0.118494958306199 0.121204121482376 0.117898232431466 0.127531997540318 0.123230641924001 0.138010158154977 5 5|0 +|/ 23660843 23661547 23661201.5 23660244 23661824 + gene protein_coding_gene TRUE TRUE AT5G58490.1 cinnamoyl-CoA reductase family similar to cinnamoyl-CoA reductase family [Arabidopsis thaliana] (TAIR:AT2G02400.1); similar to NmrA-like family protein [Solanum demissum] (GB:AAT39306.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) 0.0573842808968543 0.625718386939286 0.544759731035066 1 0.240406522208642 17.1569648388137 0.0573842808968543 0.0748082036477773 AT5G24760_at 2.43857063621800 2.79891286475440 2.65289865221285 2.67791206746864 2.94946501774164 2.3127283371898 3.47715812298858 3.08858749926971 2.89335792761732 3.42374856487509 4.59033443295453 5.00479097624096 3.80839398558604 4.57442770854306 4.99104084120617 4.43472491873832 3.07056124200639 4.03811724891507 3.06990923691161 0.266525680099709 0.249196240752647 0.249196240752647 0.249815036640386 0.250196529015106 0.261957742131061 0.251235008924755 0.253985515665756 0.260366648124609 0.258581615945983 0.251121607787191 0.257616184244708 0.249196240752647 0.25371203679285 0.258100097682224 0.253709766008177 0.254210679528947 0.25347157687349 0.250271366014264 5 5|0 -|/ 8495045 8496011 8495450.3 8494794 8497422 - gene protein_coding_gene TRUE TRUE AT5G24760.1|AT5G24760.2|AT5G24760.3 alcohol dehydrogenase, putative|oxidoreductase/ zinc ion binding similar to ADH1 (ALCOHOL DEHYDROGENASE 1), alcohol dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G77120.1); similar to Alcohol dehydrogenase superfamily, zinc-containing [Medicago truncatula] (GB:ABE81140.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain GroES-like; (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085); contains InterPro domain Alcohol dehydrogenase, zinc-binding; (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase, zinc-containing; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrogenase GroES-like; (InterPro:IPR013154) -0.0742059788258447 -0.625555359393278 0.544862676015415 1 0.240306695369305 6.5210562309347 -0.0742059788258447 0.143425980925884 AT5G51400_at 9.34061064466286 9.66086090426385 9.69324026251766 9.89188096312662 10.4161034511108 10.0943074410257 9.35175661962618 9.32196200781624 9.33304660613559 8.78871339626461 9.91290247558254 9.78299059201318 9.85065822452426 9.7361340590263 9.6758402959309 9.38851092656037 9.6492839722323 9.75866368000047 8.94075678931566 0.115420344003956 0.109300730919570 0.113068745977082 0.105396626800283 0.110385391523758 0.108539206543852 0.112301485444693 0.111319650014383 0.114777031499732 0.123025457005028 0.105299692246495 0.103057954303485 0.10608260505901 0.110628373894972 0.112393355777406 0.107340144120614 0.115059992799237 0.108420179392970 0.114287191681692 5 5|0 -|/ 20896026 20896782 20896410.3 20895839 20897360 - gene protein_coding_gene TRUE TRUE AT5G51400.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45010.1); similar to unknown [Hordeum vulgare subsp. vulgare] (GB:AAS58477.1); contains InterPro domain Protein of unknown function Cys-rich; (InterPro:IPR006461) -0.0594786126277347 -0.6240096491166 0.545839276906522 1 0.239361402712555 19.0914462661716 -0.0594786126277347 0.0859123159870914 AT5G40340_at 5.94108910184947 6.41162464566782 6.95958429411647 7.07403908482333 7.85518314762497 7.09917560261618 6.46351971230903 5.83583739803016 7.24399518859307 6.09693164799391 8.27696768378999 7.84403879762862 7.11475084933561 8.15189529082524 6.91217419995608 7.45872373238944 6.87349859778336 6.7880086842289 6.48887816822043 0.260805011132313 0.257483276899127 0.259337950905623 0.262471549275402 0.265576074810346 0.269364992222115 0.256661894038744 0.253017071825477 0.264083625543015 0.266858383767182 0.253343972260832 0.25924075929894 0.253017071825477 0.272627877474889 0.269384588538734 0.255702285778266 0.267853039677373 0.265630462062480 0.255593214133272 5 5 - 16149031 16149416 16149230.182 16148882 16151908 - gene protein_coding_gene TRUE TRUE AT5G40340.1 PWWP domain-containing protein similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27860.1); similar to hypothetical protein DDBDRAFT_0188541 [Dictyostelium discoideum AX4] (GB:XP_636078.1); contains InterPro domain PWWP; (InterPro:IPR000313) -0.0879853779867472 -0.624005607238671 0.54584183192502 1 0.239358933698643 13.723727738927 -0.0879853779867472 0.189574736994646 AT5G53680_at 1.18199253971492 1.34669622259474 1.25902454620088 2.12900658762933 1.29307863469383 1.71246213271689 1.61798347036056 1.46361308512769 1.95011936280628 1.92671010246353 1.77682761265048 1.71090926765865 1.44766345723305 1.42919653291708 1.83894510217706 1.66122530078814 1.93368925791543 1.9386408761885 1.63937015980966 0.19048173309993 0.196611169069146 0.197131578462110 0.194571133815641 0.194106805201878 0.199222701419649 0.193010543047803 0.196918982544491 0.194599738575367 0.19048173309993 0.194988599165002 0.190558394440388 0.194620519409103 0.19048173309993 0.193515532766303 0.19048173309993 0.193863822761793 0.201962137114602 0.194951553485368 5 5|0 +|/ 21815616 21816289 21815945.444 21815608 21816335 + gene protein_coding_gene TRUE TRUE AT5G53680.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G53720.1); similar to Os02g0714000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047916.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF99380.1); similar to RNA binding motif protein 24 [Danio rerio] (GB:NP_998030.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0822591226970524 -0.62303026822816 0.546458578127844 1 0.238763571953132 3.27841734453029 -0.0822591226970524 0.171639240448077 AT5G17070_at 6.10421880267636 6.38784740930595 7.10741699160356 6.76574286016211 7.74184972914735 6.81275611898942 6.64177487916485 6.37830593029064 5.67743523593781 5.47284098553633 6.84022221847255 7.257541789394 6.66793641618388 6.64120176220867 7.15142410505784 6.68500052964733 6.10215538875301 6.21524641134802 5.36104152793323 0.206260168777342 0.197711279277076 0.197546350372805 0.196454743430589 0.205804953347855 0.219402377791620 0.200918655261904 0.208052154217391 0.212780761326482 0.221838739375217 0.200527232227308 0.200211977923079 0.200498426100147 0.201028687503119 0.195888000840502 0.198419243906199 0.227814355475994 0.215838186031011 0.203597698486009 5 0|5 /|- 5613712 5615194 5614154.25 5613371 5616141 - gene protein_coding_gene TRUE TRUE AT5G17070.1 similar to putative protein [Medicago truncatula] (GB:ABE91889.1); contains domain FAMILY NOT NAMED (PTHR16487); contains domain SUBFAMILY NOT NAMED (PTHR16487:SF4) -0.086010344875897 -0.622572670612668 0.546748071991913 1 0.238484544014231 12.841920920552 -0.086010344875897 0.183944752614965 AT5G37110_at 1.50768544705178 1.65182421765886 1.50098039773007 2.07873735672406 1.44008329893853 1.65097842601840 1.80728100437759 1.78596313523079 1.98251211390506 1.83393711878629 2.22389312888284 2.23881435461589 1.98420720425671 2.35153527591941 2.00979032752025 1.84363763168011 2.10845884616981 2.27436340410677 2.01175603210958 0.180963003472247 0.183737332929801 0.179286435718542 0.187281337227415 0.183375865176947 0.178441747890286 0.178333600778808 0.188793819912828 0.187956334109448 0.189405324148251 0.179372630605299 0.178473692797280 0.181815209253721 0.189192698677164 0.187546964906098 0.177461145544462 0.181019593728921 0.177461145544462 0.184466785987486 5 5 + 14691696 14692079 14691874.8 14686824 14692143 + gene protein_coding_gene TRUE TRUE AT5G37110.1 ATP binding / helicase similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13250.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05080.1); similar to AT hook motif-containing protein-related [Arabidopsis thaliana] (TAIR:AT3G42100.1); similar to hypothetical protein 27.t00039 [Brassica oleracea] (GB:ABD65060.1); similar to hypothetical protein 31.t00030 [Brassica oleracea] (GB:ABD65117.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE80108.1); contains InterPro domain Herpes helicase; (InterPro:IPR003840); contains InterPro domain Protein of unknown function DUF889, eukaryote; (InterPro:IPR010285) -0.0646595100935113 -0.621666414738902 0.547321661342981 1 0.237932498304148 3.71397796542174 -0.0646595100935113 0.109382361571721 AT5G48670_at 3.02466709149281 3.02092735961205 3.33841859667912 3.82399804072534 3.36208945393923 3.13011077186099 2.76557098147406 3.09624079498541 2.73565709744277 2.91648787219438 3.04183065204801 3.17321070143613 3.38408876868261 3.50317116822964 2.81484875937325 3.14312746557406 3.37299432101778 3.52151759934255 2.94046404326995 0.258409845373386 0.25486023571932 0.261898543690010 0.263872224417570 0.261708510991821 0.24959609046219 0.249690622567189 0.252352079438132 0.257767228070618 0.253703936202687 0.250475670394737 0.256548235904671 0.24959609046219 0.249831768731677 0.251515543182691 0.24959609046219 0.24959609046219 0.253403436548792 0.25099655062423 5 5 - 19756079 19756492 19756277.273 19755942 19757067 - gene protein_coding_gene TRUE TRUE AT5G48670.1 AGL80/FEM111 (AGAMOUS-LIKE80); DNA binding / transcription factor AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. similar to MADS-box protein (AGL35) [Arabidopsis thaliana] (TAIR:AT5G26630.1); similar to Transcription factor, MADS-box [Medicago truncatula] (GB:ABE94129.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.0646363662287581 -0.621623568310696 0.547348788245752 1 0.237906416807908 6.24952872822881 -0.0646363662287581 0.109306730964160 AT5G55820_at 0.566341692280058 1.05606581868960 0.969660186350796 0.885591914864513 0.571769327563852 0.839242410409092 0.867889611170609 0.794159047186295 1.36069595800493 1.10531873553689 1.47112776601493 1.53103326805305 0.810870228916099 1.52633024718555 1.65238620584222 1.4557939199262 1.51797402197699 1.53141646489803 1.04368278030509 0.169790106974082 0.170357403968764 0.169886043748540 0.166622303925621 0.167770574886891 0.175624690290278 0.166733861754876 0.169972271263964 0.167121243892528 0.170296228689730 0.167061788768445 0.174076686277542 0.180119016763420 0.172408551144089 0.180896613145086 0.169752017866105 0.172685739690378 0.174088966453488 0.170613425231716 5 5|0 +|/ 22610248 22611219 22610697.444 22603513 22611261 + gene protein_coding_gene TRUE TRUE AT5G55820.1 similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to cell wall-anchored protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (GB:YP_300225.1); contains InterPro domain Inner centromere protein, ARK binding region; (InterPro:IPR005635) 0.0618403020855719 0.619588506546338 0.548638103425506 1 0.236669547497772 2.12234783771465 0.0618403020855719 0.0984854746092595 AT5G55940_at 8.29476862364256 8.51868565160873 9.01624452838508 9.08024176613832 9.13861608262046 8.81044726612753 7.80567452663965 7.8498760428669 6.92136405345102 7.36080788842265 8.11784832049016 8.274749512312 8.14944482130575 8.05234498119102 8.69060391356617 8.1172008113578 8.2403334230277 8.19368269740656 7.39173134300375 0.176608227772279 0.174899719079887 0.178605005199493 0.179346028216075 0.171955097998163 0.190767057290774 0.168518815490665 0.166607519555440 0.202965980691019 0.185411469782536 0.177275383366827 0.170037024966431 0.172745692412563 0.171453950708909 0.173313441533067 0.166607519555440 0.180032926449139 0.166607519555440 0.182068292253328 5 5|0 -|/ 22673677 22675067 22674777.25 22673224 22675274 - gene protein_coding_gene TRUE TRUE AT5G55940.1 EMB2731 (EMBRYO DEFECTIVE 2731) Identical to UPF0172 protein At5g55940 [Arabidopsis Thaliana] (GB:Q9FG71); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51620.3); similar to putative CPF 0172 family protein [Salicornia bigelovii] (GB:ABD97881.1); contains InterPro domain Protein of unknown function UPF0172; (InterPro:IPR005366) 0.0558178924982113 0.618277858244275 0.54946937562288 1 0.235874948012699 16.2913995551910 0.0558178924982113 0.0700568002828908 AT5G20480_at 3.44735844698826 3.85166779193905 3.61443859512392 3.93063082158205 3.2141165929509 3.47805006317356 2.63240307129703 2.17139973135601 2.34833985342983 2.53590586196761 2.92948126548337 2.45560213971446 2.52249561235417 2.70917453459184 2.78470366529907 2.93910263970845 2.96170608666031 2.82594678826879 2.15063895306768 0.226598137322907 0.244692090471907 0.229297847046133 0.244354081804805 0.226377938521338 0.231668118926349 0.220050450420814 0.225462832331827 0.225093920257481 0.229817995370334 0.229705369938470 0.228199349404633 0.226717775748738 0.222356290704315 0.223637506292003 0.225457869743414 0.226007612286667 0.236708949285979 0.228761229034912 5 5|0 +|/ 6925001 6925626 6925260.3 6922482 6925889 + gene protein_coding_gene TRUE TRUE AT5G20480.1 EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47090.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47580.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G47110.1); similar to Protein kinase [Medicago truncatula] (GB:ABE91397.1); similar to Leucine Rich Repeat family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99894.1); similar to receptor kinase-like protein (GB:AAC49123.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0690099231444698 0.617927079140964 0.549691976324158 1 0.235662547179719 5.8480022131339 0.0690099231444698 0.12782972129517 AT5G67290_at 6.62046231991744 7.01698344960586 7.9682313667888 8.0520953697389 8.1610540851266 7.91464175085283 7.12929804202131 7.02755538427387 6.94891156826513 6.74159646452587 7.63337151766022 7.792433674842 7.75788336818586 7.86366973515946 7.65478132491996 8.01773806325546 7.79031197874196 7.91668556643415 6.61729780511806 0.173899550448517 0.163833143696278 0.166879674486507 0.167236706830088 0.165653506044077 0.178420867902278 0.167052272581729 0.170837858445835 0.173121439294555 0.16865394740384 0.168398125582510 0.161038437029153 0.160557938999297 0.169421930221322 0.167305830390009 0.172860700461169 0.172108219109538 0.160605905454221 0.162844055927640 5 5|0 -|/ 26865670 26866303 26866046.3 26865374 26867072 - gene protein_coding_gene TRUE TRUE AT5G67290.1 FAD-dependent oxidoreductase family protein similar to Os07g0155100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058918.1); similar to D-amino acid oxidase [Zea mays] (GB:CAL58663.1); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042) 0.0583883227512265 0.616862230163089 0.550368030392201 1 0.235018451986122 14.7726042291838 0.0583883227512265 0.0839507391819554 AT5G59100_at 1.24095362367732 1.16885435769036 1.60991952052515 1.39940164199879 1.45384896692401 0.963370928195434 0.787521931753622 1.32225906192668 1.30573980234814 1.37245184482924 1.17791213283894 1.05893843629711 1.16502616874811 1.17032580041449 1.73223310501808 1.31820793246677 1.77528372996594 1.83124256869570 1.27591409310604 0.203621751829527 0.199326297244061 0.208640426623507 0.210151287844309 0.202828734358515 0.199326297244061 0.203326636355225 0.205247862377976 0.205397574086448 0.203944984939780 0.199326297244061 0.202285544024674 0.206200270238623 0.202372889997737 0.202239636891282 0.199326297244061 0.205496104571543 0.208870325387193 0.213404296386927 5 5 - 23876213 23876682 23876420.455 23876120 23879355 - gene protein_coding_gene TRUE TRUE AT5G59100.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G46840.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59120.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G46850.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.0698034915989175 0.616583393765174 0.550545136321597 1 0.234849962076187 2.60410699461981 0.0698034915989175 0.131342514430823 AT5G53100_at 1.24325296712849 1.70573013529291 1.60687524631226 1.82671480323226 1.54727007452048 1.35260786587862 1.54587382983491 1.38256033305568 1.66605961861569 1.30415879294396 1.00261854504465 1.31805191728819 1.47266098732267 1.58605358607174 1.27051162324427 1.08421731175204 1.45762804400613 1.77445965873329 1.25016359483886 0.206020736585287 0.215121295477099 0.210041609202477 0.216410513057872 0.210188434133158 0.218480759970146 0.206090399077440 0.217392675826932 0.227416277545108 0.218328003914830 0.214438199601163 0.208864467648125 0.213705058832698 0.206823021973153 0.221702695757065 0.207677620798331 0.21526315313354 0.222604356429753 0.208679571122365 5 5|0 +|/ 21544899 21545522 21545274.2 21543476 21545549 + gene protein_coding_gene TRUE TRUE AT5G53100.1 oxidoreductase, putative similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G53090.1); similar to forever young oxidoreductase [Solanum bulbocastanum] (GB:AAL60069.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -0.0616251187671397 -0.61641617956728 0.550651359646025 1 0.234748954908904 2.91514526256480 -0.0616251187671397 0.0989260194036958 AT5G02840_at 10.1228539323557 10.1391476387437 10.8310565515372 10.8972218500589 11.3412214751251 11.5112633655889 10.4105745846676 10.5676500158455 10.9971757366752 10.6025051227396 11.2927940719869 10.8678894714616 11.3283985093063 11.2141933384190 10.7587911147293 11.3166873568204 11.1438781629931 11.0436986924718 11.0294020641439 0.0580351044565003 0.0585063086173532 0.058435235144651 0.0576188994595054 0.0582010433616342 0.0632933121825522 0.0562020105789342 0.0579267723135069 0.0617553948634074 0.0595947782212206 0.0580032882177279 0.0556931781005614 0.0571087781454455 0.0564641045518035 0.0593050531742166 0.0556931781005614 0.062907987710362 0.0590510841029323 0.0561343076043141 5 5|0 +|/ 649797 650475 650088.571 648702 651970 + gene protein_coding_gene TRUE TRUE AT5G02840.1|AT5G02840.2|AT5G02840.3 myb family transcription factor|DNA binding / transcription factor similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G09600.2); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005)|similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G09600.1); similar to MYB transcription factor MYB118 [Glycine max] (GB:ABH02853.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0513669659909035 -0.615968523191014 0.550935791650009 1 0.234478669068998 21.7261998338869 -0.0513669659909035 0.0417597316710872 AT5G11390_at 5.03101933406955 6.12773934309210 6.2654541492928 6.70485484208138 7.37890089505774 6.86512615456424 5.73097744358687 5.3377293892254 5.14282959695833 5.69901811036397 6.788425476991 6.88288247653214 6.12691228035334 7.16435918641075 6.35781104581605 6.54034083841476 6.04117348123684 6.30969922762867 5.656562122398 0.252169911290652 0.253110407921284 0.262257310573392 0.252980594676106 0.256127725030558 0.270318850440989 0.258647622397413 0.262683125813268 0.278778046295317 0.252416111043751 0.252773673119125 0.253087293469259 0.259611051797878 0.265633540304028 0.267939329993213 0.251437979325924 0.252654983140222 0.254497144371867 0.254777721604339 5 5 + 3635630 3636352 3636070.2 3633668 3636571 + gene protein_coding_gene TRUE TRUE AT5G11390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68910.1); similar to putative protein [Medicago truncatula] (GB:ABE91791.1); contains InterPro domain Prefoldin; (InterPro:IPR009053) 0.100868825023688 0.615721743499276 0.551092626024712 1 0.234329746221987 12.1931854163278 0.100868825023688 0.233108952906595 AT5G07070_at 3.57526698987532 3.39360508028928 3.56431313433155 4.22374274546999 3.27836526504115 3.55451922501489 2.94035785002416 3.02675729993172 3.15682176245226 2.64916845407884 3.30546944883879 3.58053901661396 3.24307710002787 3.76496761180207 3.30952523991920 3.40423573680769 3.80467139802524 3.57077648216271 3.11372489401011 0.179813923417228 0.177046812166592 0.181298104379934 0.191293230717249 0.178642237078984 0.190961510437300 0.187774805104707 0.178871167910254 0.192645447409261 0.180958599175618 0.178964289106631 0.181391244314044 0.182941941402155 0.181159340319634 0.186655659402768 0.186187204674420 0.183427043346447 0.183172935192288 0.178905474271784 5 5 - 2196828 2197235 2197040.182 2196435 2198115 - gene protein_coding_gene TRUE TRUE AT5G07070.1 CIPK2 (CBL-INTERACTING PROTEIN KINASE 2); kinase Encodes CBL-interacting protein kinase 2 (CIPK2). similar to CIPK10 (CBL-INTERACTING PROTEIN KINASE 10), kinase [Arabidopsis thaliana] (TAIR:AT5G58380.1); similar to CBL-interacting protein kinase 2 [Populus trichocarpa] (GB:ABJ91210.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0689093563247766 -0.615368189667053 0.551317361792148 1 0.234116485221701 6.6801890109748 -0.0689093563247766 0.128524325517876 AT5G09660_at 12.9006587607982 13.0453504783173 13.5496298318786 13.5003710264876 13.4814579568854 13.4043185690456 13.5854031713393 13.5718918236038 13.4218523706774 13.6513417073441 14.11948625057 13.9964433630526 14.0189090130604 14.0918545697416 13.8638785211041 14.1358744629139 13.9886908358891 14.1148257054034 13.6029030646258 0.0628142016507763 0.0625180547267958 0.0639260037254207 0.0647371330826928 0.063253776212645 0.0669834600781536 0.0623003998770054 0.0638908472902385 0.0676100453553089 0.0634044286186729 0.0632602514068718 0.0628339145992014 0.0625594752335027 0.06395213039687 0.0646422517675224 0.0622963977238404 0.0727464620032815 0.067947998685848 0.0622963977238404 5 5|0 -|/ 2993825 2994576 2994237.556 2993445 2995676 - gene protein_coding_gene TRUE TRUE AT5G09660.1|AT5G09660.2|AT5G09660.3 PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2); malate dehydrogenase|PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) encodes a microbody NAD-dependent malate dehydrogenase Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); similar to Malate dehydrogenase 1, glyoxysomal precursor (GB:Q43743); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097)|Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain L-lactate/malate dehydrogenase; (InterPro:IPR001557); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097)|Identical to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH) [Arabidopsis Thaliana] (GB:Q9ZP05); similar to PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1), malate dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G22780.1); similar to Malate dehydrogenase 2, glyoxysomal precursor (GB:Q9XFW3); contains InterPro domain Lactate/malate dehydrogenase; (InterPro:IPR001236); contains InterPro domain Malate dehydrogenase, active site; (InterPro:IPR001252); contains InterPro domain Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria; (InterPro:IPR010097) -0.050031055711957 -0.614494334231697 0.551873047863562 1 0.233589868840653 27.1798573961775 -0.050031055711957 0.0297206785679243 AT5G55070_at 9.16456834902692 9.54782238356858 10.0549788914773 10.3216811514453 9.78435679127664 9.40503625289598 9.54131965426854 9.63648889847865 8.39180211788353 8.83491661131864 9.59397551587267 10.1210689776847 9.6265769579897 9.71001371915944 9.6570246894482 9.64596644770325 9.77228744656174 9.82454366503775 8.53869517180524 0.119338889141874 0.115376718642213 0.119593885171446 0.115741904571821 0.115091697790117 0.118886658595316 0.121627973662641 0.118587667697137 0.143761039257522 0.123328619429708 0.126598445050524 0.115752951605529 0.119218235570941 0.11973874386622 0.115091697790117 0.116170730137750 0.130446714085716 0.119107687278680 0.128335154868474 5 5|0 +|/ 22366778 22367610 22367358.714 22364437 22368043 + gene protein_coding_gene TRUE TRUE AT5G55070.1 2-oxoacid dehydrogenase family protein similar to 2-oxoacid dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT4G26910.2); similar to Os04g0394200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052652.1); similar to putative 2-oxoglutarate dehydrogenase E2 subunit [Oryza sativa (japonica cultivar-group)] (GB:BAD22992.1); contains InterPro domain 2-oxo acid dehydrogenase, lipoyl-binding site; (InterPro:IPR003016); contains InterPro domain Biotin/lipoyl attachment; (InterPro:IPR000089); contains InterPro domain Dihydrolipoamide succinyltransferase; (InterPro:IPR006255); contains InterPro domain Single hybrid motif; (InterPro:IPR011053); contains InterPro domain Catalytic domain of components of various dehydrogenase complexes; (InterPro:IPR001078) 0.0629149751519988 0.614139804393993 0.552098583914387 1 0.233376414163881 18.8482332854387 0.0629149751519988 0.105400804632205 AT5G08170_at 7.44685114190563 7.6485010584785 8.7549181796006 8.85180463281064 8.78016476094751 8.81608250307828 8.25444027551728 8.39398031879238 7.48614522279026 7.28707483674761 8.30877510881829 8.06764371563208 8.41027497278825 8.1991554049163 8.02774228399314 8.59247776903688 8.73978741237811 8.05005053778884 6.9755331769139 0.167602185925053 0.160633246753058 0.160697970887592 0.161323023682407 0.159795172859959 0.164951622123313 0.165459306294014 0.163240797903148 0.174067027353044 0.165252878983268 0.162637474201437 0.156808415208113 0.159897292511561 0.168865783624048 0.161493187021732 0.160452510620099 0.161769216135130 0.165624349954867 0.175266121914207 5 5|0 -|/ 2628666 2629436 2629037.222 2628326 2631096 - gene protein_coding_gene TRUE TRUE AT5G08170.1 EMB1873 (EMBRYO DEFECTIVE 1873); agmatine deiminase Identical to Agmatine deiminase (EC 3.5.3.12) (Agmatine iminohydrolase) (AIH) [Arabidopsis Thaliana] (GB:Q8GWW7;GB:Q94IC7;GB:Q9LEZ0); similar to Os04g0466600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053032.1); similar to OSJNBa0016O02.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE05993.3); similar to agmatine deiminase [Pseudomonas aeru (GB:NP_248983.1); contains InterPro domain Porphyromonas-type peptidyl-arginine deiminase; (InterPro:IPR007466) 0.0517048694938125 0.613766851270882 0.552335896055445 1 0.233151990370751 16.1428792653011 0.0517048694938125 0.0460504871203496 AT5G51520_at 0.842275604915334 1.09394629052478 1.17616113363336 0.592326593641413 0.791986880005322 1.18279508059286 0.5718345675816 0.929718652782955 0.400684487574124 1.48813596663706 1.00182879281413 1.22711841828735 1.50535144353706 1.41994362391010 1.30216411443655 1.6498478031799 0.924475959538316 1.33424928842082 1.38031191135738 0.224333281963007 0.225213515043169 0.225937722008031 0.226712644151761 0.231399980124055 0.232828587275050 0.229670191934173 0.233581001994515 0.230567196973872 0.223643879042523 0.232979554357256 0.226098812160736 0.227656856826990 0.233089275406638 0.225302827881018 0.231831828097696 0.232098536140617 0.223643879042523 0.227563081276799 5 5 + 20943229 20943530 20943370.455 20943206 20943820 + gene protein_coding_gene TRUE TRUE AT5G51520.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT4G25250.1); similar to pectin methylesterase inhibitor isoform [Solanum phureja] (GB:ABG49144.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.07261123666035 0.612575151764668 0.553094565830591 1 0.232435734063327 2.09029720997889 0.07261123666035 0.143229575877754 AT5G67220_at 8.6724370518772 8.7708605510379 9.31766268777033 9.33467116621772 9.52581247274992 9.46537072891283 8.49751663485022 8.49792637991395 8.52843289901631 8.4925330776845 9.16851234693577 9.226180782673 9.04497371441497 9.09403910930903 9.28157937832517 9.16598177621505 8.98417107567567 9.1025222035229 8.35428949952165 0.119269051229241 0.116295622793096 0.124209876977461 0.120206238688532 0.123376233611457 0.120458834289181 0.121534870912525 0.123221132564041 0.13303045515187 0.122711185826310 0.125652720684760 0.118713068344941 0.119646770327101 0.121268140049295 0.127786790010555 0.121205896394798 0.121074592830803 0.121165673407082 0.124230159060582 5 5 - 26837502 26838077 26837785.727 26837347 26839190 - gene protein_coding_gene TRUE TRUE AT5G67220.1 nitrogen regulation family protein similar to FAD binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT3G49640.1); similar to Os06g0712900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058562.1); similar to putative PP35 [Oryza sativa (japonica cultivar-group)] (GB:BAD54069.1); contains InterPro domain Dihydrouridine synthase, DuS; (InterPro:IPR001269); contains InterPro domain FMN/related compound-binding core; (InterPro:IPR003009) -0.0491818934002399 -0.6124188453673 0.553194118383273 1 0.232341883702332 17.8062389793953 -0.0491818934002399 0.0202036008338538 AT5G10490_at 6.15752230658816 6.53260160514036 7.82943773325587 7.55412434972305 7.62711742385146 7.55159586011993 7.04234368559919 6.77166817512799 6.09636759791236 6.34574265914967 7.38679165351012 7.58330639996405 7.01801056531183 7.13537039662923 7.13015468981507 8.07522797901197 7.68919863769409 7.17532432659278 6.23521725574413 0.204250555704281 0.190589204743251 0.191071420092909 0.194888951245319 0.198019331994197 0.194926972652571 0.190807337185693 0.191295013786143 0.217964796293485 0.196191238908136 0.192146648519212 0.194468064333140 0.198001979723737 0.196437296963406 0.203248669801949 0.191478946135182 0.198359116670143 0.195602786048015 0.199441696804701 5 5 - 3300381 3300939 3300708.455 3300226 3304762 - gene protein_coding_gene TRUE TRUE AT5G10490.1|AT5G10490.2 MSL2 (MSCS-LIKE 2) A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. similar to MSL3 (MSCS-LIKE 3) [Arabidopsis thaliana] (TAIR:AT1G58200.2); similar to 117M18_28 [Brassica rapa] (GB:AAZ66947.1); contains InterPro domain MscS mechanosensitive ion channel, C-terminal; (InterPro:IPR011066); contains InterPro domain MscS Mechanosensitive ion channel, transmembrane; (InterPro:IPR011014); contains InterPro domain Like-Sm ribonucleoprotein-related, core; (InterPro:IPR010920); contains InterPro domain MscS Mechanosensitive ion channel; (InterPro:IPR006685) 0.0600861746137606 0.611979600200313 0.553473930389395 1 0.232078268471412 13.9457758517598 0.0600861746137606 0.0940645112740124 AT5G38080_at 1.12978476481425 0.57924752774022 1.19442382002443 1.10391171414666 0.924083090918612 0.895438331870623 0.880230203979156 1.07362689749429 0.887160441265032 1.39311284059347 1.06804964611710 0.964104890537475 0.425374148951414 0.923296182754139 0.891204394880388 1.05542369429597 1.17230741228405 0.980291141091897 0.8483388255927 0.184790768102142 0.189520265341186 0.183811896938507 0.188985789045261 0.183232083675338 0.184205505185228 0.191058768289086 0.183396022164922 0.185988752966205 0.186017212685415 0.185553165616431 0.187225447593513 0.192066872374579 0.195458346714709 0.184863576508817 0.182721702823359 0.185808663377024 0.185729890771726 0.182434959493816 5 5|0 -|/ 15208982 15209834 15209300.3 15208945 15209875 - gene protein_coding_gene TRUE TRUE AT5G38080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G38090.1) -0.0619272935937950 -0.611615877868113 0.553705692332228 1 0.231860111315211 1.96153186454742 -0.0619272935937950 0.10230831518866 AT5G03280_at 8.26843450570357 8.50391042981427 8.70279618755968 8.92743903541172 9.24414651315777 8.86517701536389 7.79878303995962 7.97021374345356 7.375855428868 7.60809662242236 8.6980025724462 8.62344451489858 8.46284749109336 8.40730465845488 8.26018195824192 8.64881794245848 7.91920309177466 8.10406468186194 7.68405457508331 0.154753804955326 0.139574650812036 0.1492601820682 0.138981346463807 0.14464041702927 0.161949173927671 0.144866724074456 0.141960559416867 0.144990059286242 0.138641173673096 0.141013344456848 0.143113925979257 0.142845659913462 0.145579831301389 0.140510158248795 0.138641173673096 0.153501277832385 0.156873124445612 0.158191289516641 5 5|0 +|/ 792440 792840 792645.1 787472 793355 + gene protein_coding_gene TRUE TRUE AT5G03280.1 EIN2 (ETHYLENE INSENSITIVE 2); transporter Involved in ethylene signal transduction. Acts downstream of CTR1. Identical to Ethylene-insensitive protein 2 (EIN-2) (AtEIN2) (Cytokinin-resistant protein AtCKR1) (EIN2) [Arabidopsis Thaliana] (GB:Q9S814); similar to NRAMP1 (NRAMP metal ion transporter 1), manganese ion transporter/ metal ion transporter [Arabidopsis thaliana] (TAIR:AT1G80830.1); similar to ethylene signaling protein [Lycopersicon esculentum] (GB:ABD65477.1); similar to ethylene signaling protein [Lycopersicon esculentum] (GB:AAS67011.2); similar to EIN2 [Petunia x hybrida] (GB:AAR08678.1); contains InterPro domain Natural resistance-associated macrophage protein; (InterPro:IPR001046) -0.059369604277588 -0.610638022057357 0.55432904709245 1 0.231274198820578 16.5083553451505 -0.059369604277588 0.0913950957194578 AT5G11040_at 5.9408372352707 5.95511092568371 6.83531291506502 6.71260077026524 6.9169569238698 6.31743561749064 5.47125720661037 5.72477787639508 5.91000505459492 5.43901041235096 6.48727864120015 6.98951964473885 6.537518761748 6.50860835666255 6.65059957108437 6.44042049468263 6.33854927723693 6.65931335930731 5.30286424092893 0.186919670094456 0.187916806572294 0.191645550968185 0.189500267593346 0.193985746090340 0.207610416584395 0.192010048817162 0.189608967035286 0.194031364105540 0.201132253864993 0.19711952297204 0.185157188075187 0.186871384604320 0.196937028224952 0.195265297536432 0.195711268878914 0.199149154622036 0.197279252287184 0.191221261505289 5 5|0 +|/ 3499999 3500574 3500324.1 3495288 3500923 + gene protein_coding_gene TRUE TRUE AT5G11040.1 similar to Os04g0502200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053234.1); similar to H0311C03.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67557.1); similar to OSJNBa0029H02.30 [Oryza sativa (japonica cultivar-group)] (GB:CAE01639.1); contains domain TPR-like (SSF48452); contains domain FAMILY NOT NAMED (PTHR21512); contains domain gb def: Hypothetical protein T5K6_30 (PTHR21512:SF5) -0.0647050550037291 -0.609646577993195 0.554961465861547 1 0.230681031805575 12.2978374751434 -0.0647050550037291 0.114655804641584 AT5G27680_at 1.46834359587618 1.37460505223348 1.63958060332185 1.08543319017059 1.42421867887344 1.49304989433338 1.12626033832976 1.13146168380442 1.56089643847999 1.60356247455360 1.97432380261321 1.89278127555701 1.64523449114747 1.48067185035422 2.29221450372181 1.81192424450479 1.80384727844665 1.51327042382158 1.64042182640237 0.223990988445591 0.220225021308347 0.223412273343083 0.223323810533705 0.224568672213647 0.223952554598724 0.218235712888177 0.229589140132264 0.214973673560478 0.221041728974452 0.222961731526947 0.220029931425706 0.223851915483057 0.225715338293651 0.220656759012278 0.221879341391053 0.225435525138204 0.217926904610668 0.220316687244834 5 5|0 -|/ 9794273 9795159 9794713.8 9793793 9798964 - gene protein_coding_gene TRUE TRUE AT5G27680.1 RECQSIM (Arabidopsis RecQ helicase sim); ATP-dependent helicase DNA helicase similar to RECQL2 (Arabidopsis RecQ helicase l2), ATP-dependent helicase/ protein binding [Arabidopsis thaliana] (TAIR:AT1G31360.1); similar to putative DNA helicase RecQsim [Brassica napus] (GB:AAO52679.1); similar to putative DNA helicase RecQsim [Oryza sativa (japonica cultivar-group)] (GB:AAO52678.1); similar to Helicase, C-terminal; Calcium-binding EF-hand; DNA-directed DNA polymerase B; UBA-like [Medicago truncatula] (GB:ABE86642.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain ATP-dependent DNA helicase RecQ; (InterPro:IPR004589); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) 0.0607307467192601 0.609596514287667 0.554993411044179 1 0.230651103097881 3.04457432807597 0.0607307467192601 0.0979909805752466 AT5G12030_at 0.878190331821903 0.9383874803547 1.27555254910768 1.64256312651394 1.23835435525515 1.41532863411666 1.09530641581483 0.97617427685425 1.61695188441132 1.48902088908059 1.10030757583401 1.28808135009688 1.88818044263610 1.00736325315429 1.30086104496436 1.63950118880275 1.20484315430309 1.24816129991645 1.31228893622028 0.205498707096024 0.204406760559706 0.212896783878029 0.207327616743349 0.205812124570244 0.205213737532735 0.207342279913631 0.202206667346276 0.203538107913773 0.201600890934602 0.201417134631631 0.207346315819383 0.208057312793737 0.204148051806738 0.201985137192856 0.201304066400294 0.207106243844282 0.215626061552911 0.201304066400294 5 5 - 3884263 3884642 3884485.273 3884108 3884738 - gene protein_coding_gene TRUE TRUE AT5G12030.1 AT-HSP17.6A (Arabidopsis thaliana heat shock protein 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. similar to 17.6 kDa class II heat shock protein (HSP17.6-CII) [Arabidopsis thaliana] (TAIR:AT5G12020.1); similar to class II small heat shock protein Le-HSP17.6 [Lycopersicon esculentum] (GB:AAC14577.1); contains InterPro domain HSP20-like chaperone; (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20; (InterPro:IPR002068) 0.0557760965864133 0.609428423173895 0.555100675953925 1 0.230550632804612 2.58619030470533 0.0557760965864133 0.0741984504539633 AT5G16080_at 4.34462812111175 5.33595904203154 4.60847878853753 5.45416417836098 3.62985184217088 3.83115131208870 1.53843512146261 1.86587003108018 2.02395335410623 1.97432340823931 2.53706722129807 1.43963248998653 1.68912230247109 1.66898768069302 2.12103466049866 1.63552830317614 1.65311008386705 2.86535005893675 2.15301720684516 0.247534895965956 0.256112072816258 0.243686241593142 0.248208482555846 0.247796169602639 0.256514726141098 0.254273510587709 0.242720366361294 0.240931604560109 0.247599773510596 0.240241043764695 0.244107119268838 0.243151391614342 0.244264979631639 0.240241043764695 0.242062317619630 0.247516702055066 0.249458204407753 0.249010582081641 5 5 - 5252540 5253100 5252826.273 5252318 5253621 - gene protein_coding_gene TRUE TRUE AT5G16080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68620.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96915.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) 0.100464385781548 0.609259207992902 0.555208669907149 1 0.230449516592054 5.82689751619526 0.100464385781548 0.235103271327402 AT5G04250_at 3.98583822378941 4.16962638884869 4.65604984371971 4.33143956768465 5.19255564932511 4.53331464964804 3.04703270512553 3.43147123802451 3.29128411905432 3.28550402701679 3.69728782870351 3.33599175062888 3.89418415742182 3.51991003629666 4.04682214979972 4.33514583098524 3.90608974282376 4.16880921050427 3.35836722858652 0.251504443140021 0.243894251222210 0.253312567396345 0.259948888390491 0.267025214838434 0.256160545003656 0.259000481752931 0.242844652853041 0.249267887886913 0.248545955802928 0.247657669980595 0.245692563343413 0.242197210358547 0.252024885139252 0.24384205889179 0.242654836139223 0.251782153919509 0.248457104478151 0.246951888464322 5 0|5 /|+ 1177628 1178331 1178012.833 1176009 1178701 + gene protein_coding_gene TRUE TRUE AT5G04250.1 OTU-like cysteine protease family protein similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT5G03330.2); similar to OTU-like cysteine protease-like [Oryza sativa (japonica cultivar-group)] (GB:BAD22968.1); similar to Os03g0859800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051970.1); contains InterPro domain Ovarian tumour, otubain; (InterPro:IPR003323) 0.0731008149971278 0.607824910034584 0.556124518516327 1 0.229593483498202 7.75579030657805 0.0731008149971278 0.146998869971527 AT5G13830_at 2.20494338921878 2.40309464799184 2.70864122151107 3.2730422411639 2.40369460336016 3.32964730654104 1.93515340856580 2.48647241704852 1.94842908383283 2.26172499813249 1.97189942336352 2.24751621632542 2.49888816490244 1.90474458480742 2.32295612583222 2.22519649779607 2.69548718307118 2.02781086627972 2.42124796922272 0.206962278127418 0.204219619221149 0.214930883674458 0.215553157684023 0.203844907905354 0.201988842212414 0.202697733908489 0.210930998544278 0.216893849835950 0.209394104841813 0.207818707782812 0.202494005341712 0.208564242447111 0.200618450034674 0.200618450034674 0.205454929148856 0.212278952600011 0.207635870082933 0.212221170287649 5 5|0 +|/ 4467569 4468220 4467967 4467366 4468490 + gene protein_coding_gene TRUE TRUE AT5G13830.1 FtsJ-like methyltransferase family protein similar to FtsJ-like methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G25730.1); similar to putative FtsJ cell division protein [Oryza sativa (japonica cultivar-group)] (GB:AAO18459.1); similar to Os03g0822300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051734.1); contains InterPro domain Ribosomal RNA methyltransferase RrmJ/FtsJ; (InterPro:IPR002877) 0.0931098531603368 0.607457093982746 0.55635951786798 1 0.229374261082875 4.81672602102177 0.0931098531603368 0.21329669974433 AT5G05560_at 3.24588639583123 3.09073876031466 3.75830550670512 3.42345164038652 3.45987763160768 3.69894682647637 2.40765002141895 2.58746506154600 2.52920599737709 2.79305115687454 2.72995833965343 2.90623309013756 2.93174282620705 2.41777996768733 3.41052066972181 3.07152896124256 3.67292036101551 3.15055539619389 2.98964422410375 0.205778987057065 0.213975320993587 0.209034204411197 0.214387860741387 0.222540359291747 0.215028704718892 0.202116275716777 0.211537167301439 0.203491275705973 0.203503276247915 0.211482877689995 0.203176422260632 0.205477699491258 0.205954979949776 0.201217394578702 0.203597718000033 0.202221461010698 0.203642963223367 0.20366912356868 5 5 + 1653679 1654588 1654201.909 1641453 1654757 + gene protein_coding_gene TRUE TRUE AT5G05560.1 APC1 (anaphase-promoting complex/cyclosome 1); ubiquitin-protein ligase Arabidopsis thaliana E3 ubiquitin ligase similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV43888.1); similar to Os05g0354300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055285.1); contains InterPro domain Proteasome/cyclosome, regulatory subunit; (InterPro:IPR002015) 0.0571242215828898 0.607219876920225 0.556511106391182 1 0.229232942403261 6.11255960266957 0.0571242215828898 0.0822119725231163 AT5G07150_at 0.818100126825126 0.663323346309261 0.96763577997526 0.872703826496343 0.501063434976774 0.965932603767679 0.126456724302411 0.626490378421193 1.07142285587248 0.568905373488421 -0.0512969449927978 0.500142052128834 0.361850903424401 0.514171412038765 0.783916958306384 0.199123039090767 0.436756811234298 0.789948258108855 0.580809150806281 0.189989944023054 0.192762079999328 0.190672818498916 0.186869941650206 0.187025459169598 0.187632210676946 0.195755510728714 0.186869941650206 0.192213955161823 0.186869941650206 0.186869941650206 0.186869941650206 0.195119717824872 0.191546930474457 0.194593257569225 0.193546771404522 0.197261728629396 0.189428274188841 0.191571855429441 5 5|0 +|/ 2217342 2217913 2217613.5 2215821 2217984 + gene protein_coding_gene TRUE TRUE AT5G07150.1 leucine-rich repeat family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G58540.1); similar to Protein kinase [Medicago truncatula] (GB:ABE80245.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.0662732515899105 -0.606364202278019 0.557058098964273 1 0.228723612001725 1.28381612157917 -0.0662732515899105 0.122258548819214 AT5G19240_at 9.79713307084537 10.2753814722009 10.8213574927315 10.7946338013999 9.84298018917965 9.20538514485597 9.29053147031742 9.22700713905768 9.9859930023822 9.14913762619639 10.3395002810871 10.5781893761993 9.77523615839195 10.5906221650684 9.47369303898654 9.91175734037158 9.38437739086405 10.3228441151647 8.87356608192859 0.151826867095858 0.138263963598841 0.141867382262931 0.144779918408355 0.144675360016414 0.154254021148613 0.142728479428767 0.148128267920591 0.142414136049168 0.147529530124073 0.147364503207357 0.147288697478330 0.142537916431800 0.146751659586344 0.142898462732245 0.141838155339996 0.160739594534876 0.142955429374210 0.146996064111411 5 0|5 /|+ 6470507 6470940 6470709.3 6470131 6471064 + gene protein_coding_gene TRUE TRUE AT5G19240.1 Identical to Putative GPI-anchored protein At5g19240 precursor [Arabidopsis Thaliana] (GB:Q84VZ5;GB:Q8H7A4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19230.1); similar to Os07g0645000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060451.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC07018.1); contains domain PR-1-like (SSF55797) -0.0705586106501939 -0.606356843123342 0.557062804628605 1 0.228719234440873 19.5984310826248 -0.0705586106501939 0.138443565595906 AT5G09700_at 1.50570650898883 1.50073235164622 1.76034183726519 1.84479354979901 1.55135567661179 1.39859355059583 1.06731704093443 1.34395924274957 1.45778918355837 1.69861334828089 1.49566232381692 1.36518357198347 1.62935528210680 1.40795283158625 1.68025111131868 1.52986183945625 1.69676325737806 1.81097270797273 1.46691326651643 0.179442004718306 0.169879501399859 0.182711329784536 0.185834764095568 0.180053132260765 0.178360068623798 0.169879501399859 0.177338314013961 0.173269342932181 0.175580763107017 0.173598635622056 0.176293262762203 0.183748397330020 0.175059406481367 0.172747457713361 0.174438899749813 0.17636843079552 0.182426829460538 0.178938969147173 5 5 - 3003724 3004267 3004020.545 3003721 3005129 - gene protein_coding_gene TRUE TRUE AT5G09700.1 glycosyl hydrolase family 3 protein similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to alpha-L-arabinofuranosidase [Raphanus sativus] (GB:BAE44362.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772) 0.0525139212302232 0.606108732664094 0.557221466898119 1 0.228571675875153 3.05565278573434 0.0525139212302232 0.0566140097652771 AT5G07020_at 10.3982281721182 10.3766359517789 10.8310108293875 10.9383965038891 10.8885654017013 10.7121171971891 10.8034099585610 10.8825979905206 11.0163078093366 10.9731033786076 11.7426732660462 11.8674420900423 11.5405837872173 11.6355506575201 11.8532199754987 11.9764467225638 11.6147491360139 11.6406705676958 10.7281132555242 0.0751828246611495 0.0749254672079274 0.0795359060399281 0.0744529421829494 0.0750582495456708 0.0771751504328631 0.0783734882504734 0.073135308567476 0.0785878820072703 0.0793305489096657 0.0733810846616095 0.073135308567476 0.0754332878753595 0.07585809296817 0.0753305921485021 0.073135308567476 0.0819638821358312 0.0768288410733436 0.0764717869017632 5 5|0 -|/ 2180699 2182147 2181149.4 2180503 2182419 - gene protein_coding_gene TRUE TRUE AT5G07020.1 proline-rich family protein similar to unknown protein [Lycopersicon esculentum] (GB:AAU03360.1) -0.050152500923413 -0.605773899335345 0.557435626930684 1 0.228372629529284 22.0487495038837 -0.050152500923413 0.0384643413737152 AT5G53290_at 1.34423041090052 1.42844019882992 1.6732020172254 1.30046816818746 1.36620450680589 0.905048673209342 1.05774313801065 1.12028990521064 1.56327393302661 1.69528214038875 1.25879828978196 1.65504113009104 1.81842142338217 1.33947513613352 1.65022451399563 1.27181999555267 1.79260968947653 1.41452671569563 1.3370750665765 0.210809811728547 0.206979817179917 0.208723188431712 0.209663381043788 0.205609413894583 0.208517943714415 0.206715742862478 0.208807048058436 0.223754629799464 0.213338405709743 0.204077864507367 0.206254644079033 0.204412026856684 0.2031500390654 0.208764923167777 0.204398892442529 0.204961651412020 0.205026985756039 0.206007939097623 5 5 - 21635397 21635757 21635582.545 21635039 21636493 - gene protein_coding_gene TRUE TRUE AT5G53290.1 CRF3 (CYTOKININ RESPONSE FACTOR 3); DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. similar to CRF4 (CYTOKININ RESPONSE FACTOR 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G27950.1); similar to Pathogenesis-related genes transcriptional activator PTI6 (PTO-interacting protein 6) (GB:O04682); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0617160614506575 -0.605170588331767 0.55782162178506 1 0.228014240569245 2.80294920651128 -0.0617160614506575 0.104206875982922 AT5G55450_at 10.2404566451032 10.4582575029078 11.0290256606157 11.0548455986866 8.84260658753862 8.67746379310345 2.48126364740622 2.81723139653755 8.14645518080228 3.96436225030868 3.62039678260388 7.51694503877927 3.00696321306464 3.64679514480890 3.40738244048409 4.50953551880428 3.60907448894936 3.54600950160957 4.47301991486428 0.263827243875737 0.261058887353087 0.264244030970877 0.265113476599988 0.258553209009775 0.258876215338348 0.261552567164290 0.258553209009775 0.268215035654129 0.272386251079299 0.261412932524116 0.259493722251575 0.270317700197052 0.258553209009775 0.258553209009775 0.261797405787824 0.273099709655493 0.260294144995338 0.260114350367813 5 5 + 22484794 22485069 22484915.909 22484716 22485489 + gene protein_coding_gene TRUE TRUE AT5G55450.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to lipid binding [Arabidopsis thaliana] (TAIR:AT5G55410.2); similar to MtN5 [Medicago truncatula] (GB:CAA75593.1); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.055486492498428 -0.604462227008704 0.558275017538208 1 0.227593870955708 13.0180606280522 -0.055486492498428 0.0750846582881521 AT5G15130_at 0.622408626278655 0.422856956104707 0.823609731719867 0.655573143142112 0.714736535638886 0.40481789437162 0.59245243778642 0.397870188998797 1.19462900644152 0.569647170316137 0.587596696619954 0.761406064971673 0.29151203397537 0.417653232060196 0.52946167914738 0.88090474129416 1.04075564710847 1.03695237577255 0.759968496592597 0.189479123436352 0.195634593256228 0.196000884713998 0.196634012930751 0.197869777189208 0.191033846618301 0.190536097797301 0.188516187855501 0.192742491453715 0.193308490470122 0.199261029486872 0.192396232615196 0.193593636336230 0.188376819028338 0.194237369299211 0.18836253426595 0.194013937272526 0.190744595215131 0.194593083185519 5 5 + 4906341 4906770 4906511.273 4904350 4907097 + gene protein_coding_gene TRUE TRUE AT5G15130.1 WRKY72 (WRKY DNA-binding protein 72); transcription factor member of WRKY Transcription Factor; Group II-b Identical to Probable WRKY transcription factor 72 (WRKY DNA-binding protein 72) (WRKY72) [Arabidopsis Thaliana] (GB:Q9LXG8;GB:Q8GYQ6); similar to WRKY61 (WRKY DNA-binding protein 61), transcription factor [Arabidopsis thaliana] (TAIR:AT1G18860.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE84469.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) -0.0556629469406977 -0.600872048384324 0.560576113847519 1 0.225470348805991 1.34663828924787 -0.0556629469406977 0.0777724255751592 AT5G59610_at 6.86424384514601 6.96297371871834 7.98487545401726 7.826394813345 8.37529803354131 7.67286153148884 7.77987868145842 7.51985929231466 6.34955487764271 6.52249079421533 7.75079418522739 7.6853394891821 7.58455301622621 7.6559835860534 7.76439761196468 7.7812031454336 7.43844762078147 7.25547309427663 6.40773840884144 0.205759019288198 0.198776114522541 0.205855737580749 0.200610567290678 0.194825454615298 0.216472807440698 0.194825454615298 0.205589410346822 0.212385943195321 0.197823261766951 0.194825454615298 0.204363324748013 0.200953942703720 0.205577462681894 0.200637687311884 0.194825454615298 0.213256306005626 0.215773962558737 0.207299260830580 5 5|0 +|/ 24030598 24032130 24031106.7 24030391 24032180 + gene protein_coding_gene TRUE TRUE AT5G59610.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT4G39960.1); similar to Heat shock protein DnaJ, N-terminal [Medicago truncatula] (GB:ABD33136.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.0685857822309601 -0.600581396779239 0.560762635054543 1 0.225298948170111 14.6438575023586 -0.0685857822309601 0.133587756647471 AT5G53010_at 5.71373382885537 5.37254820405855 6.6338298334085 6.03372408686968 6.7856147354937 5.76653001236655 4.3153512622691 3.72635541714153 4.73556223382237 4.43847489182624 4.45184535149461 4.38037571235088 4.76500836879812 5.11487633830354 4.13403497858696 5.70059326171889 3.91461006651056 5.24063469800091 4.49402420663822 0.301895795370077 0.299835143344985 0.303246550764650 0.29572148292568 0.302722688253586 0.302120182037716 0.297670191807882 0.302672236897189 0.323320546374821 0.291930244735061 0.302102801030381 0.300777678177544 0.29758044443535 0.29317966305481 0.291930244735061 0.293016440792511 0.327764561705757 0.300587686944766 0.295677536369217 5 5|0 -|/ 21505947 21507397 21506599.571 21505716 21513763 - gene protein_coding_gene TRUE TRUE AT5G53010.1 calcium-transporting ATPase, putative similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to ACA9 (autoinhibited Ca2+ -ATPase 9), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G21180.1); similar to ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G57110.2); similar to Os04g0605500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053795.1); similar to putative calcium-transporting ATPase [Oryza sativa (japonica cultivar-group)] (GB:BAD27978.1); similar to putative calcium-transporting ATPase 8, plasma membrane-type [Oryza sativa (japonica cultivar-group)] (GB:BAD09972.1); contains InterPro domain E1-E2 ATPase-associated region; (InterPro:IPR008250); contains InterPro domain ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; (InterPro:IPR001757); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain Calcium-translocating P-type ATPase, PMCA-type; (InterPro:IPR006408); contains InterPro domain H+ transporting ATPase, proton pump; (InterPro:IPR000695) -0.0991860252401608 -0.599472294260212 0.561474701176973 1 0.224645605701508 10.1778448180910 -0.0991860252401608 0.236140956068131 AT5G61740_at 0.935689558952316 0.660329549952904 1.25898712858934 0.946466327265148 0.826839271780798 0.948153165657501 1.10524698637898 1.09013383922698 1.51951088363506 1.13323608870145 1.47437718499607 1.63257094948650 1.21347902893296 1.54905298022357 1.39040457319927 1.47988205815145 1.33999448467588 1.38711066282758 1.00950499954881 0.187857372056415 0.195767040029502 0.196037226256287 0.188126221372420 0.186888034436170 0.187828870669956 0.188873339276636 0.187281099116307 0.199412642406405 0.198414323532613 0.193598418484691 0.193316786155587 0.199180590542571 0.199508256227813 0.191144753599804 0.193828207770094 0.194014560171456 0.188065187043426 0.195566602456458 5 5|0 +|/ 24829000 24829747 24829380.1 24825710 24829823 + gene protein_coding_gene TRUE TRUE AT5G61740.1 ATATH14 (ABC2 homolog 14); ATPase, coupled to transmembrane movement of substances member of ATH subfamily Identical to ABC2 homolog 14 (ATH14) [Arabidopsis Thaliana] (GB:Q9FLT4); similar to ATATH2 (ABC2 homolog 2), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47740.1); similar to ATATH16 (ABC2 homolog 16), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G61700.1); similar to ATATH6 (ABC2 homolog 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47780.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAC99368.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD25026.1); similar to ABC transporter, putative [Medicago truncatula] (GB:ABE91253.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.0548093792186358 0.597010651812072 0.563056915565484 1 0.223199529952636 2.29853555227888 0.0548093792186358 0.0751220416713285 AT5G20030_at 3.89678222095015 3.98151405401255 3.87579489702671 4.07150594474686 4.83298349865582 4.221679843781 3.18101272657522 3.44284618044116 3.39320786789965 3.24024054329261 4.12961052938796 4.48944786029685 4.19770687009118 4.65248336148026 3.97218953743019 4.24255418781702 3.47929400916929 4.37389293621332 3.2164895709765 0.226808466964951 0.225414867400357 0.229774133432176 0.221520683084906 0.226691204563171 0.229914967601324 0.225969846850970 0.223001408143346 0.242366785846636 0.225067416360203 0.23170300114207 0.221332492540810 0.226182104339966 0.233695446812208 0.230785858582400 0.231083043492171 0.235624629587627 0.225817218923595 0.221486262663307 5 5 - 6765049 6765535 6765278.545 6764729 6766671 - gene protein_coding_gene TRUE TRUE AT5G20030.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G32440.1); similar to Agenet [Medicago truncatula] (GB:ABE92607.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain ENT; (InterPro:IPR005491) 0.0648282625094121 0.596366312235383 0.563471470299244 1 0.222821930725389 7.67574495687802 0.0648282625094121 0.120857493542734 AT5G57390_at 2.20175769067649 2.09005173020556 2.12169279274261 2.19263197319081 1.79318169826572 2.34873147109987 2.01746152079136 2.07740151158407 2.48081314356411 2.26379742682878 2.65277267592151 3.11644989045522 2.62679156223184 2.67204837539585 2.87107681210123 2.73746887044502 2.21191174784578 2.72372649059176 2.36336707108983 0.205863171741845 0.197408659574665 0.204035538108842 0.203918863257870 0.198235221716301 0.208894928117922 0.203423852315935 0.199475017417143 0.196257037762064 0.197703702722889 0.200502011173537 0.206240440857365 0.207446214091243 0.205598879787516 0.208376556489933 0.210041259107337 0.198676253156468 0.199848052884717 0.197218780392951 5 5 - 23270689 23271227 23270992.727 23270685 23273676 - gene protein_coding_gene TRUE TRUE AT5G57390.1 AIL5 (AINTEGUMENTA-LIKE 5); DNA binding / transcription factor similar to PLT1 (PLETHORA 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G20840.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE82188.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0596109506239957 -0.5952720741939 0.564175866880224 1 0.222181548787017 4.64079214037844 -0.0596109506239957 0.0993730061052136 AT5G58003_at 5.07544936076432 5.28304009676063 5.62381177108417 5.86324138333863 6.29545503980176 6.03068127935213 4.57411205459816 5.27945622884542 4.43807784823851 4.60887937945461 5.35165737803336 5.74523991947409 5.54090338341326 5.95705324359835 5.1658991302788 5.62391222968515 5.76178881883278 5.29195308689882 4.95348073287889 0.20053301579104 0.199825562531878 0.201718964160628 0.207061315355926 0.195760846113566 0.213520224232918 0.199436249720049 0.202359220998153 0.213210870506489 0.206670774694959 0.204947218577243 0.203331947653323 0.195583352683041 0.201055070287368 0.195583352683041 0.201070690450998 0.209115099971772 0.19858871900994 0.201775889460273 5 5 + 23498400 23499007 23498800.273 23497030 23499274 + gene protein_coding_gene TRUE TRUE AT5G58003.1 phosphoprotein phosphatase Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences. similar to CPL3 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3), CTD phosphatase [Arabidopsis thaliana] (TAIR:AT2G33540.1); similar to BRCT; NLI interacting factor [Medicago truncatula] (GB:ABE80113.1); similar to Os05g0390500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055440.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain FCP1-like phosphatase, phosphatase domain; (InterPro:IPR011947); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) -0.0699840821373827 -0.59449174896429 0.56467848452753 1 0.221725546805765 10.6139626779686 -0.0699840821373827 0.141443580611344 AT5G03030_at 7.98363729692425 8.30062847875269 9.20261230516655 9.07251611305672 9.05262362859945 8.81113992961346 8.56125160859136 8.56673118636587 7.81871700853803 7.85081575811541 8.77906288300219 8.69863225550554 8.62627527711228 8.89464174743079 8.59788298880597 8.97339482841515 8.83409292689102 8.789529875727 7.98140630084802 0.139531808331633 0.137685630094898 0.138176929849010 0.133460367992199 0.128887740702505 0.137169142027353 0.126479975746211 0.137195180805891 0.140526282956321 0.132980896726469 0.137799473607507 0.126479975746211 0.127188376751753 0.136763504790065 0.132314426618369 0.129702560017689 0.140837457398521 0.129316413168238 0.132996283958337 5 5|0 -|/ 708538 709090 708880.2 708316 709701 - gene protein_coding_gene TRUE TRUE AT5G03030.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G09700.1); similar to Os01g0157800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042072.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65026.1); similar to Os07g0192300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059099.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) -0.0540277768087369 -0.593575836706704 0.565268750652497 1 0.221191021476417 17.0228102952313 -0.0540277768087369 0.0725495082196858 AT5G26720_at 4.54431312821606 4.64943638535413 5.60061117057784 6.07836199071205 5.9904286618421 5.18663673455153 5.08433179096744 5.11010599635075 5.18995441611063 4.98195159107732 6.36948361960716 6.04882005477719 6.10139363111994 6.24258968823391 5.68078948656499 6.07344329321714 6.01152761348251 5.44572920849028 5.02776293291802 0.207512152536666 0.19843817170449 0.205882276925084 0.209509878898608 0.200954531562818 0.207118895788115 0.201260958211082 0.207661004740647 0.216015823298606 0.204782445285947 0.203965453576215 0.207300245601679 0.201320916315088 0.201413399505077 0.204609857745278 0.208644444900668 0.205085669437540 0.202244066128141 0.204139303175419 5 5 + 9304108 9304488 9304320.545 9304028 9304746 + gene protein_coding_gene TRUE TRUE AT5G26720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05935.1); similar to hypothetical protein MtrDRAFT_AC149038g24v1 [Medicago truncatula] (GB:ABD32861.1) -0.0758323754070774 -0.593485083612184 0.565327255644448 1 0.221138099848628 10.8121674262241 -0.0758323754070774 0.162896063406534 AT5G45620_at 8.09563104679147 8.28066265164718 8.98985223849994 9.02456129586038 9.35426640181539 8.99252392547028 8.13487477101084 8.1966302160472 7.85163836809852 7.3527716097361 8.5025034882375 8.42446087202697 8.54077785216749 8.5421600972642 8.52982764408645 8.38360753742802 7.92355738568761 8.57354799441329 7.27729398158981 0.178837826155815 0.166546127360972 0.186706897237797 0.185566344358744 0.173191996277605 0.185633725916829 0.171749800188494 0.176090707950129 0.186979728095255 0.18410793086587 0.173629051672382 0.178432134737289 0.183423545165216 0.170301377955556 0.163434222504191 0.172466746718318 0.181049100445779 0.175810054289112 0.179030025408102 5 5|0 +|/ 18519654 18520509 18520174.667 18518713 18521344 + gene protein_coding_gene TRUE TRUE AT5G45620.1|AT5G45620.2 26S proteasome regulatory subunit, putative (RPN9) similar to 26S proteasome regulatory subunit, putative (RPN9) [Arabidopsis thaliana] (TAIR:AT4G19006.1); similar to RPN9 [Nicotiana benthamiana] (GB:ABB18115.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717)|similar to 26S proteasome regulatory subunit, putative (RPN9) [Arabidopsis thaliana] (TAIR:AT4G19006.1); similar to RPN9 [Nicotiana benthamiana] (GB:ABB18115.1); contains InterPro domain Proteasome component region PCI; (InterPro:IPR000717) 0.0537707870488022 0.593042248325882 0.565612782214481 1 0.220879973583959 16.5943536577539 0.0537707870488022 0.0713759272394148 AT5G07870_at 3.25548151353343 3.67633226350631 3.85716263570681 3.74733302826455 3.96002969513732 3.66896849111346 3.15120670468992 3.13229745778838 3.74320868758467 2.90121801591644 4.79724042334913 4.75863231063375 3.70057351539552 3.80941413345776 4.18022398617031 3.95893037119902 2.87808662323619 3.80335716773528 3.37356488455112 0.223568066643787 0.212620631623694 0.210818197838688 0.218977375459588 0.218415357287879 0.215630863121557 0.210704267817495 0.219902426329152 0.223369738048528 0.222248358096105 0.211369821104951 0.217412576943564 0.226954753299619 0.215248689224198 0.225281016691278 0.210704267817495 0.263672424294293 0.225026114690695 0.220882348961695 5 5 + 2514770 2515122 2514939.727 2513795 2515419 + gene protein_coding_gene TRUE TRUE AT5G07870.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G07860.1); similar to N-hydroxycinnamoyl/benzoyltransferase 6 [Glycine max] (GB:ABC47848.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.0574581250655608 -0.592636607350105 0.565874396752222 1 0.220643685096436 7.21867039659146 -0.0574581250655608 0.0906271397174617 AT5G08530_at 10.7518013023665 10.8669785693805 11.4499687975030 11.5496032257875 11.3201322547727 11.3805196555174 11.0092435108499 10.9757716017137 10.4596096437944 10.5881844012532 11.2461022243097 11.1940717723558 11.0532593474045 11.1239908817444 11.2352628127080 11.1746804643970 11.2907596041847 11.2214090462379 10.3314141839102 0.0789243210501319 0.0792998013473128 0.0847500924486144 0.0816682202162462 0.0865986158924329 0.0838097568098986 0.0840433980014496 0.0789243210501319 0.09052025242336 0.086192749339079 0.0789243210501319 0.0789243210501319 0.081454102420503 0.0799077344626788 0.0804312745050814 0.0789243210501319 0.0808377621150977 0.0854940358512728 0.088462303163168 5 5 - 2759853 2760398 2760136.273 2759318 2761876 - gene protein_coding_gene TRUE TRUE AT5G08530.1 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial, putative similar to NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit (ISS) [Ostreococcus tauri] (GB:CAL57468.1); similar to NADH:ubiquinone oxidoreductase 51 kD subunit [Chlamydomonas reinhardtii] (GB:AAQ63696.1); similar to NADH dehydrogenase [Solanum tuberosum] (GB:CAA58823.1); contains InterPro domain NADH-quinone oxidoreductase, F subunit; (InterPro:IPR011537); contains InterPro domain Respiratory-chain NADH dehydrogenase, 51 kDa subunit; (InterPro:IPR001949); contains InterPro domain Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; (InterPro:IPR011538) 0.0481171460596053 0.591763572086766 0.566437679072178 1 0.220135647102457 21.9890914124799 0.0481171460596053 0.0289368040580857 AT5G63560_at 0.66270112934242 0.400166177645791 1.12717336104636 0.889530994369624 0.6970070226692 0.928789738582992 0.48894425228898 0.96855582992395 1.33889008035085 0.689108641708796 1.02746788759471 0.637336842404741 0.676594324060973 1.22252508514846 1.02259984333128 0.587090935638928 1.19441418831586 1.33388753342382 0.973359855439608 0.202358246552224 0.202833378029905 0.197871479671727 0.203695279099352 0.199619349154922 0.199263887714337 0.205927811142787 0.198491572001947 0.206499586119650 0.201377912622629 0.203615461578418 0.214468264693888 0.202134170097482 0.204725872362105 0.209111213281561 0.205009463090092 0.206012542945099 0.204749869837418 0.217639636780062 5 5 + 25467862 25468411 25468153.727 25466707 25468640 + gene protein_coding_gene TRUE TRUE AT5G63560.1 transferase family protein similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G48720.1); similar to Os11g0507200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067952.1); similar to putative hydroxyanthranilate hydroxycinnamoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD88037.1); contains InterPro domain Transferase; (InterPro:IPR003480) 0.0618032311154851 0.591230358944817 0.566781859884021 1 0.219825702005424 1.75195478281180 0.0618032311154851 0.110693991706272 AT5G36260_at 0.771567297984486 0.893177703718327 0.762232200578421 1.02983574599329 0.868708945742007 0.882961101308845 0.910714404986068 0.763839015620037 0.825341374977566 0.803987018898232 0.645923408706218 0.662064186737517 0.795490181819558 0.899161093122177 1.17108861914049 0.821405270210999 0.966680249472702 1.07336723749831 0.509736644089812 0.203261086835131 0.206631114841541 0.211715531915816 0.203274872731527 0.209893521733607 0.203261086835131 0.207925997026744 0.219170997353206 0.203994031353395 0.206062170220107 0.206611185790943 0.203261086835131 0.208785857352506 0.204039557887527 0.208648447920224 0.207131058441775 0.206353137048028 0.209040057570264 0.207711731080009 5 5|0 -|/ 14302298 14303486 14302896.1 14302185 14305563 - gene protein_coding_gene TRUE TRUE AT5G36260.1 aspartyl protease family protein similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G65240.1); similar to Os02g0473200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046837.1); similar to Eukaryotic aspartyl protease [Medicago truncatula] (GB:ABE89788.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) 0.0512346705866215 0.590830638298666 0.567039948768195 1 0.219593523835484 1.65658915707162 0.0512346705866215 0.0569179531205066 AT5G04640_at 1.00652884691640 1.09421870964096 0.681752038014553 1.03238881333126 0.683536153971546 1.17841967773658 0.845888333059717 1.13935873116022 1.39285747285668 1.09827405828480 1.24843630594756 1.74547815497782 1.38057113049854 1.52847475859240 1.09707905336578 1.05690017050203 1.11924268865873 1.46521327441619 1.06249733876176 0.180148551743410 0.185098380595288 0.185340690253711 0.180148551743410 0.183522660972181 0.183930254002027 0.184227580473957 0.181642185309023 0.196081749348459 0.18212151913201 0.186820886133160 0.183153252527103 0.183268062053023 0.186822318108567 0.190461313025391 0.188970099968634 0.182089089924979 0.183252500858977 0.187752943325629 5 5 + 1333230 1333743 1333480.364 1332826 1333794 + gene protein_coding_gene TRUE TRUE AT5G04640.1 MADS-box family protein similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT1G46408.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25164.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) -0.0633152062910662 -0.589857956728023 0.567668252902006 1 0.219029151772395 2.21512011235605 -0.0633152062910662 0.117584275231417 AT5G06670_at 3.07256113483876 2.92028269228338 3.15541583017477 3.55494691803681 3.71217863337855 3.68549815305265 2.90732770783270 3.20973833511874 3.69265638061502 3.22269776952857 4.18775787125428 4.98485099335132 3.89589056673327 3.83743626187433 4.86408494270161 4.20863303837373 3.21459473162323 3.74274292050692 3.60844862302041 0.203488013353386 0.198650394467027 0.203575164723181 0.208662818121186 0.203800684707061 0.196399676682464 0.200872462560710 0.199184269399811 0.199331611888817 0.195898341581756 0.197033038250185 0.198344008064412 0.193869834812183 0.198759519900042 0.194269193960346 0.195339546663734 0.206891374726959 0.200531683800326 0.19356839204953 5 5 - 2048285 2048679 2048488.5 2048244 2055020 - gene protein_coding_gene TRUE TRUE AT5G06670.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G12020.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT2G21380.1); similar to kinesin-related protein (MKRP1) [Arabidopsis thaliana] (TAIR:AT1G21730.1); similar to Kinesin, motor re (GB:ABE89527.1); similar to Kinesin heavy chain, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:AAP54589.2); similar to kinesin motor protein 1-like [Oryza sativa (japonica cultivar-group)] (GB:BAD17149.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.0571988412892825 -0.589704609213202 0.567767342682313 1 0.218940255100854 7.08971026235138 -0.0571988412892825 0.0907469764225221 AT5G62910_at 6.59840956317448 6.74636690147343 7.14288982878047 7.38409503256214 7.64616655648055 7.62180898382897 5.9450618111037 6.03717487238921 6.19706240482361 5.83754925219935 7.19021881182332 6.99330276382989 6.882437769924 7.10506531826668 7.16284308346016 7.14783479767695 6.9426158436148 7.1083913424808 5.9525154996649 0.156077453360313 0.148552002865062 0.147871999102986 0.152627242717316 0.155703101619049 0.162215177176995 0.155017580003023 0.152471511753809 0.155174391117197 0.156389323045169 0.149382227333855 0.147807598963326 0.156999273959868 0.158639548823114 0.145002663177113 0.146927655695872 0.158586827326566 0.148531637358887 0.156137718776237 5 5 + 25268699 25269195 25268967.818 25267886 25269430 + gene protein_coding_gene TRUE TRUE AT5G62910.1 protein binding / zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G48070.2); similar to hypothetical protein LES1_20t00015 [Lycopersicon esculentum] (GB:ABI34275.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.050395710105279 0.589663101574808 0.56779416563542 1 0.218916196524085 13.4213955780310 0.050395710105279 0.0516704920744378 AT5G43140_at 4.67585227368096 4.94267534620775 5.14418797930319 5.70956653345621 6.88660358784853 4.93159307127853 5.8204554989781 5.49281636479084 4.7037577672697 4.25566997402188 6.3742990530444 6.44578401780126 6.31612792622651 6.40177294250731 6.24342711014892 6.16546968791456 5.33821567250034 5.74866199852909 4.09320444470132 0.228805489538351 0.225766171474199 0.226516985957831 0.226278480929444 0.226629596982396 0.235464972645707 0.246110134163269 0.223749255295679 0.244523807879746 0.224177638857565 0.221437021205213 0.222473443041491 0.228961242145218 0.230574705149537 0.221437021205213 0.222090420705186 0.228060179357609 0.235157206930627 0.226033044910779 5 5|0 +|/ 17338965 17340227 17339684.1 17338773 17340636 + gene protein_coding_gene TRUE TRUE AT5G43140.1 peroxisomal membrane 22 kDa family protein similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT4G33905.1); similar to hypothetical protein DDBDRAFT_0189006 [Dictyostelium discoideum AX4] (GB:XP_635703.1); similar to Os12g0508100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066849.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) 0.138531936372412 0.589593502110435 0.567839143573127 1 0.218875858958859 10.6905174301505 0.138531936372412 0.359698228960711 AT5G16310_at 5.33303258060452 5.22816396684046 6.10534047110522 6.20500834481365 7.06901109517726 6.73130180650229 4.88212632410514 5.02445210067062 4.67142846275285 4.60217834027443 4.89179339809062 4.98717222613772 5.55516459890384 4.97374259338613 4.87854912438335 5.3102453598173 4.8856873424468 5.23516969695508 4.73195025235246 0.249694451799278 0.233125535505819 0.235624348510661 0.239583882900043 0.241056806250338 0.247659656348887 0.240906620468702 0.233125535505819 0.255577667436043 0.237106644640493 0.239513973062331 0.234675375083152 0.235722949065960 0.238234506983629 0.233125535505819 0.235542755054630 0.24679970215933 0.237327443128512 0.233125535505819 5 5 - 5342589 5343080 5342869.636 5342394 5344288 - gene protein_coding_gene TRUE TRUE AT5G16310.1 ubiquitin carboxyl-terminal hydrolase family 1 protein similar to ubiquitin carboxyl-terminal hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G65650.1); similar to ubiquitin carboxyl-terminal hydrolase isozyme L5 [Dictyostelium discoideum AX4] (GB:XP_638105.1); similar to Os02g0180100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046089.1); similar to Os02g0822200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048557.1); contains InterPro domain Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1; (InterPro:IPR001578) -0.052778813504001 -0.58815815796705 0.56876715586229 1 0.218044969964044 10.7014093667149 -0.052778813504001 0.0681833841495517 AT5G44370_at 2.91349191430459 3.1831347498314 3.57172649606969 3.90866768730864 3.72694876693846 3.69839352182377 3.65806682949691 3.30348396059449 3.13648155608381 3.47361571296072 4.09978692827205 5.11744882450473 3.67685876953961 3.77194552559856 4.58294149107073 3.61264594299216 3.88382780755272 4.23362664170298 3.04770955171106 0.225124321972904 0.22058185979953 0.225274365756779 0.220544126468456 0.218274254817720 0.220061439442913 0.215464102256469 0.220215479771813 0.222303442319825 0.226380375986374 0.218625488911518 0.223670050527899 0.219930826955487 0.227112872346959 0.223498712575338 0.215464102256469 0.219309918529332 0.218540709559282 0.220374299910808 5 5 - 17892419 17892936 17892751.273 17892112 17894791 - gene protein_coding_gene TRUE TRUE AT5G44370.1 transporter-related similar to ANTR2 (anion transporter 2), organic anion transporter [Arabidopsis thaliana] (TAIR:AT4G00370.1); similar to Os12g0180100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066311.1); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE91392.1); similar to Os11g0186800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067406.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) 0.058186464248969 0.586690476155517 0.569716934836453 1 0.217197313564767 7.16631633162402 0.058186464248969 0.0967839886672785 AT5G06550_at 2.34131550245758 2.68519236463535 2.91107482966286 2.52643638023382 2.54549505912694 2.50629905445816 2.63585134099271 2.52134297882001 1.70256320153348 1.97241990308494 1.73989228080433 2.11999867802274 2.01615030733122 1.60108530355284 2.30360457408250 2.15439678818462 2.38208819359977 2.34204595530573 1.80841568617096 0.219085347106547 0.216008544430528 0.222686797123351 0.210488878503306 0.220219167146954 0.217934134381254 0.220950312439183 0.212992728616162 0.226328433023200 0.211840469787362 0.213827170593164 0.209819344620011 0.213850424987468 0.211237208292809 0.21297709291887 0.214011753053848 0.22377457323669 0.209819344620011 0.213385046812983 5 5 - 2001810 2002332 2002081.182 2001135 2003076 - gene protein_coding_gene TRUE TRUE AT5G06550.1 similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G78280.1); similar to hypothetical protein DDBDRAFT_0205230 [Dictyostelium discoideum AX4] (GB:XP_641202.1); similar to Os11g0572800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068128.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347) -0.0570852839671911 -0.586466633081191 0.569861866364175 1 0.217068207036061 4.53922961731856 -0.0570852839671911 0.0917102411081986 AT5G54870_at 8.72043998027516 8.96596882233188 9.8429964428982 9.88096381286782 9.69654429375072 9.56292072685295 8.84763228013142 9.03920859269359 8.46833442944563 8.70760226046988 9.34044212040212 8.82003689488544 9.47634223255431 9.12503264578944 8.74425809975563 9.35639707242902 9.24530800616787 9.19143538319173 8.60586988678596 0.130130689197862 0.131377677214875 0.131676341053839 0.131505130229610 0.137888193895448 0.135150543180705 0.133064518808755 0.144425946015673 0.143997009880185 0.129469310553050 0.129989351646492 0.132124042774818 0.130522681819504 0.134476357700003 0.136906438270879 0.136412830188894 0.151938359652972 0.145333218830212 0.137235550868686 5 0|5 /|+ 22308363 22308776 22308592.556 22306361 22309025 + gene protein_coding_gene TRUE TRUE AT5G54870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G70160.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27020.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53001.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB89049.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE93629.1) -0.051128451237795 -0.586040306005476 0.570137955861524 1 0.216822440382817 18.1977554102073 -0.051128451237795 0.0590120652882293 AT5G46500_at 2.93247260740931 2.68840042400417 3.71728436234066 3.43699580465251 3.08570682467278 2.57278148169410 2.12054127976229 1.72764287691580 3.36851511887807 2.67100817632879 2.95059493114794 2.27298180251861 2.57761614992338 2.93768191084978 2.31083036080966 2.42453456901891 2.64162035581444 2.67889375385561 2.54278415909713 0.198890918916468 0.191846068453578 0.210243537981687 0.204211444342628 0.191846068453578 0.193489703768531 0.195385467145677 0.191846068453578 0.195409317555342 0.193511666162666 0.193465761058665 0.194929708278643 0.197579332233094 0.194651665155722 0.196257428837849 0.192115036887117 0.192194826851248 0.203541681562411 0.191846068453578 5 5|0 +|/ 18874335 18874976 18874667.667 18873681 18875014 + gene protein_coding_gene TRUE TRUE AT5G46500.1 similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1) -0.065697838434479 -0.585627142830118 0.570405590197199 1 0.216584421416671 5.51528489801993 -0.065697838434479 0.128991847996115 AT5G26260_at 1.25866133606045 1.3289827816191 1.41635695541325 1.5164369748809 1.00399022767414 1.33101461271385 0.790055685440694 1.48421800272186 1.19451700682467 1.08692877536107 1.20945975847793 1.25142731583208 1.39740864876904 1.45127228240283 0.98152338775988 1.08724582398112 1.49576929659662 1.62462803169875 1.06839829097797 0.192405732016686 0.189473697072042 0.19393530458144 0.188955976107226 0.194375449183256 0.192897023557152 0.188005109709639 0.187618141419532 0.201745531482646 0.194165805411754 0.190683711482509 0.186477932181687 0.193689087070214 0.190826862130284 0.200107851729459 0.187338494790557 0.188102145825749 0.196016130640995 0.185430369710718 5 5|0 +|/ 9201373 9202126 9201620.4 9200466 9202403 + gene protein_coding_gene TRUE TRUE AT5G26260.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G26280.1); similar to Ubiquitin carboxyl-terminal hydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94399.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) 0.0670420281053595 0.585066405231775 0.57076892850449 1 0.216261636814610 2.48069282668771 0.0670420281053595 0.134467748535830 AT5G37030_at 1.92481279933094 1.75192288779006 1.68660886809401 1.82728221380925 1.80903926022805 2.24439092487360 1.49551848502029 1.64751755301324 1.71174925392605 1.48443060888646 1.80179362014851 1.82102868124175 1.59046678336018 1.48195617948296 1.83290433189926 1.49146189744070 1.93793558585791 1.74287018886510 1.39769552062618 0.172468812257292 0.173580316563209 0.175907009980485 0.177251808542728 0.174226248585139 0.173503459105031 0.172748971984733 0.178589577813063 0.173595022223123 0.176892324887223 0.175747542107423 0.178403216712926 0.180487067392708 0.173421114108563 0.182997750488777 0.172468812257292 0.185452651676512 0.183137654042259 0.175752153036608 5 5 - 14651848 14652389 14652020.545 14651844 14654169 - gene protein_coding_gene TRUE TRUE AT5G37030.1 tRNA-splicing endonuclease positive effector-related similar to tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana] (TAIR:AT5G37150.1); similar to putative helicase [Oryza sativa (japonica cultivar-group)] (GB:AAM76346.1); similar to Os04g0582000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053657.1); similar to OSJNBa0088A01.4 [Oryza sativa (japonica cultivar-group)] (GB:CAD41365.2); contains domain DNA2/NAM7 HELICASE FAMILY (PTHR10887); contains domain no description (G3D.3.40.50.300); contains domain SPLICING ENDONUCLEASE POSITIVE EFFECTOR SEN1-RELATED (PTHR10887:SF22); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) 0.0562087391675215 0.583963365752804 0.571484028231063 1 0.215627521822866 3.42030860052824 0.0562087391675215 0.088632831302278 AT5G40750_at 0.355991120003935 0.333553839256838 0.0639282667667277 0.606513269664827 0.547491122453718 0.413470231638034 0.298870630987200 0.268834919896294 0.683058320302893 0.107702579212017 0.232470082833817 0.246785439281742 0.430889170666686 0.0402492497978938 0.202985404280282 0.373696099630399 0.707400246889629 0.504532941698873 -0.113323460786362 0.205906046176016 0.207255664168003 0.213739361585975 0.209574811612868 0.209789232278287 0.20622228529228 0.204393776261476 0.208934741181717 0.211329908390582 0.2078451156689 0.206510536668323 0.205578282248582 0.205353027538101 0.205112599280628 0.212411540335966 0.206940274600069 0.215675714974692 0.208697120007309 0.211615637979712 5 5|0 +|/ 16326190 16326981 16326576.4 16325584 16327047 + gene protein_coding_gene TRUE TRUE AT5G40750.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G22000.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.0578976677937126 0.583448038910148 0.571818281745946 1 0.215331653541728 0.645175954563996 0.0578976677937126 0.0969362050016893 AT5G01290_at 4.76080107574075 4.68242884162548 5.70612674922294 5.65054178991921 5.82941047315852 5.39620777715492 4.97123619401643 4.98303473075916 4.75161713990286 4.5309027482539 5.76758643074764 5.95529735920722 5.77457919977027 5.65224085448533 5.90704609821919 5.82658649940938 5.13398923536429 5.47088758424178 4.76279125233445 0.223202648467662 0.215310575447484 0.221180485403655 0.216632124165361 0.230587557981712 0.220280428935136 0.221988744548855 0.223250849268154 0.243335333027092 0.220687863813375 0.224352061470345 0.219503565562649 0.215310575447484 0.224716703191914 0.215310575447484 0.224420533195990 0.222459732740805 0.219481572324617 0.217492739331766 5 5 + 120465 121341 120933.1 117306 121568 + gene protein_coding_gene TRUE TRUE AT5G01290.1 mRNA guanylyltransferase similar to mRNA capping enzyme family protein [Arabidopsis thaliana] (TAIR:AT3G09100.2); similar to mRNA capping enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G28210.1); similar to mRNA capping enzyme, C-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96062.1); similar to mRNA capping enzyme, C-terminal domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA92070.1); similar to Os12g0193200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066345.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Dual specificity protein phosphatase; (InterPro:IPR000340); contains InterPro domain Tyrosine specific protein phosphatase and dual specificity protein phosphatase; (InterPro:IPR000387); contains InterPro domain mRNA capping enzyme; (InterPro:IPR001339) -0.0538537384458966 -0.583243042445397 0.57195127707137 1 0.215214025223342 10.4313719728719 -0.0538537384458966 0.0768167169791601 AT5G62250_at 1.45409395611737 1.34155446755802 1.42828387948633 1.61608099657367 0.975050755450807 1.66542119319049 1.39383608918395 1.19911959456186 1.89054071394945 2.06583333664673 2.18045931868256 1.49141634930082 1.87329663482383 1.68176499443481 1.99085936203340 1.66361026401342 1.81438755268562 1.36226990315867 1.26218123560163 0.174996493382292 0.175585737509139 0.178816489115048 0.17900149356482 0.180961024254741 0.179622033131764 0.189566372480777 0.176548321075696 0.186819598603005 0.176938359389380 0.174842631519309 0.181699510657063 0.175817378283695 0.177632157344858 0.173733962986830 0.177167354096083 0.177773000616474 0.181241545427225 0.179117850444827 5 5|0 +|/ 25024429 25025287 25024882.5 25022982 25025322 + gene protein_coding_gene TRUE TRUE AT5G62250.1 microtubule associated protein (MAP65/ASE1) family protein similar to PLE (PLEIADE) [Arabidopsis thaliana] (TAIR:AT5G51600.1); similar to Putative microtubule-associated protein, identical [Solanum demissum] (GB:AAT40494.2); contains InterPro domain MAP65/ASE1; (InterPro:IPR007145) -0.0656207044518221 -0.583141878378978 0.572016915383217 1 0.215155990832666 3.13256835457743 -0.0656207044518221 0.129786238566182 AT5G15070_at 1.09457136138695 1.12040345428946 1.16973847692893 1.39296106356401 1.47741383043854 1.15414335199291 1.29183578079610 1.59356757537079 1.38348229469072 1.57053421261601 1.86202696984072 2.22020072645493 1.44392538152341 1.79993728475074 2.09220016245315 1.69093441277891 1.53082088296391 1.68424881585062 1.54594586313328 0.204132960796151 0.195641738280937 0.201454969851538 0.198691245916091 0.195641738280937 0.201734251990223 0.198407959594331 0.198391959979511 0.203906298025279 0.202196949134124 0.198625612509683 0.200834665549032 0.195878960126033 0.200116558176532 0.195641738280937 0.195641738280937 0.203306706410245 0.196421650851265 0.195641738280937 5 5 + 4884634 4885542 4885209.727 4876518 4885824 + gene protein_coding_gene TRUE TRUE AT5G15070.1 acid phosphatase similar to acid phosphatase [Arabidopsis thaliana] (TAIR:AT3G01310.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53244.1); similar to PREDICTED: similar to KIAA0377 splice [Gallus gallus] (GB:XP_413955.2); similar to LOC495012 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98273.1); contains InterPro domain Histidine acid phosphatase; (InterPro:IPR000560) 0.0555479567015101 0.582923413060361 0.572158676310269 1 0.215030696746327 2.93209150504115 0.0555479567015101 0.0858395613200305 AT5G54390_at 9.81614462826139 9.6941796566893 10.2710624139257 10.2298480792237 10.4879355786339 10.2434072962983 10.0282054835646 9.76463876888287 8.74399509870128 9.97827655456736 10.4967960813182 10.0992849335962 10.2162506305992 10.3766285301756 10.0372644546947 10.3639656351505 10.6389125601482 10.6078484415686 9.4658170476457 0.113969852170146 0.111208703020162 0.107519922545813 0.110536552750253 0.109737496141686 0.108703675945583 0.108152340376305 0.106846162441763 0.123139191928363 0.11245773460462 0.109075422018589 0.107996744023658 0.112867639911417 0.110249911693398 0.111527893201351 0.107889916728416 0.115939662270759 0.106840238629979 0.111308667709209 5 5 + 22104213 22104788 22104489.636 22103224 22105243 + gene protein_coding_gene TRUE TRUE AT5G54390.1 AHL (HAL2-LIKE); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. Identical to PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')- phosphohydrolase) (DPNPase) (Halotolerance protein) (AHL) [Arabidopsis Thaliana] (GB:Q38945;GB:O48892); similar to SAL1 (FIERY1), 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT5G63980.1); similar to Putative PAP-specific phosphatase [Oryza sativa] (GB:AAK98703.1); similar to Os02g0805500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048441.1); contains InterPro domain Inositol monophosphatase; (InterPro:IPR000760); contains InterPro domain 3(2),5 -bisphosphate nucleotidase HAL2; (InterPro:IPR006239) 0.0518777345748052 0.581975081735231 0.57277426510378 1 0.214487318344665 19.9422519758739 0.0518777345748052 0.0660868480575747 AT5G61770_at 4.68980984758086 4.20571683869868 5.55976807124681 5.51646025514552 5.50876865917576 5.83667406753061 4.3485164632357 4.98565567610096 4.32772329360449 4.04417290282516 4.88475668128858 5.60614365491761 5.26072294507081 5.10820541931283 5.2563616919535 5.44352451110628 4.67624447301511 4.76878760249025 4.2651976434316 0.244532984751766 0.243132935289676 0.25068367556996 0.240307919316136 0.247388908270118 0.245104250200149 0.242445313023928 0.250313128319889 0.261704123225678 0.245776538362019 0.246390889636479 0.24040292070942 0.246233925009179 0.245905163950138 0.250445582245697 0.240307919316136 0.254846405907492 0.246437104514368 0.247971518570068 5 5|0 +|/ 24833842 24834394 24834189.889 24832834 24834932 + gene protein_coding_gene TRUE TRUE AT5G61770.1|AT5G61770.2|AT5G61770.3 brix domain-containing protein Identical to Peter Pan-like protein (PPAN) [Arabidopsis Thaliana] (GB:Q9ASU7;GB:Q9FLT1); similar to Brix [Medicago truncatula] (GB:ABE89071.1); contains InterPro domain Brix; (InterPro:IPR007109) 0.0707454249600769 0.581864958265456 0.572845772738912 1 0.214424272907119 9.7504002276801 0.0707454249600769 0.149838752985887 AT5G60070_at 2.22521908330502 1.96426909621429 2.16945307714005 2.09679601565556 2.06755049676438 2.0003142595262 1.87755303257371 2.07462485106858 2.12052815172105 2.02317875687371 2.05903619183904 2.10473887397905 1.95714400357021 2.60015083989209 2.39667187123326 2.31317686230078 2.71972429954808 1.87129185019501 1.38704561031159 0.190376826461847 0.191723768548742 0.187547859761087 0.190883474823094 0.191318198448367 0.193376708104183 0.188697215205661 0.197355080656587 0.201164747741048 0.195832290348656 0.188174706729697 0.191386235441342 0.187547859761087 0.191363838401836 0.198556991403612 0.190129098605179 0.189242533474718 0.196036189324931 0.19431844169862 5 5 - 24207804 24208187 24208020.818 24207666 24210120 - gene protein_coding_gene TRUE TRUE AT5G60070.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G07710.1); similar to Os03g0281100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049741.1); similar to Ankyrin [Medicago truncatula] (GB:ABE80012.1); similar to Ankyrin [Medicago truncatula] (GB:ABE93792.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.0507580763069042 0.581600722863263 0.573017371320787 1 0.214273044160503 4.10763550005021 0.0507580763069042 0.059125958243512 AT5G59860_at 0.909318024977161 0.535497623273229 0.919922006464615 0.866606417423382 0.927838965260182 0.953112580750378 0.794679045267967 1.00870816589739 0.861281603157185 1.07579724829462 0.885224518388234 0.773837612766066 0.920375884044582 0.975116654459449 1.18666567554766 0.924917162040634 1.13967173942721 1.22310349386299 0.702580077457008 0.183003043142308 0.189900361183171 0.183289605533619 0.186431771510503 0.185033467734427 0.198797697519267 0.188044498531334 0.186248309145809 0.186737690320299 0.188375187419728 0.185324282525524 0.189478668936912 0.185369742329732 0.195930581318449 0.196589312183340 0.191010357096016 0.184172243371825 0.185801428522184 0.190897416715594 5 5|0 +|/ 24130721 24131278 24130942.857 24130688 24131675 + gene protein_coding_gene TRUE TRUE AT5G59860.1 RNA recognition motif (RRM)-containing protein similar to RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G46020.1); similar to Os01g0502800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043137.1); similar to OJ991214_12.1 [Oryza sativa (japonica cultivar-group)] (GB:CAE01512.2); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.0533900184914095 0.581318560354712 0.573200642926957 1 0.214111626070078 1.80621055476597 0.0533900184914095 0.0752402721796755 AT5G38260_at 1.07701390718215 1.41959046458054 0.947637908861079 1.11013785807429 0.916725866129205 1.01368886269716 0.651238228511566 0.745794140646015 0.958106935417217 0.725784585877941 0.54946398219878 0.655436498643102 0.969057858399666 0.422342594939111 1.02432843217976 0.782589545055885 1.56107506575377 1.03250295889171 0.951532028260553 0.215883066894863 0.214041788274430 0.217397191184735 0.214413359327689 0.211692387414842 0.211564930892832 0.21401075418944 0.213936607956248 0.217828898865774 0.216797999030415 0.222218846717040 0.213061905249628 0.213093875317592 0.213205971952212 0.217634570375599 0.216085484318489 0.215165421968944 0.220218691327956 0.22011365248038 5 5 - 15300998 15301495 15301246.727 15300922 15303067 - gene protein_coding_gene TRUE TRUE AT5G38260.1 serine/threonine protein kinase, putative similar to kinase [Arabidopsis thaliana] (TAIR:AT1G67000.1); similar to serine/threonine protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66930.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G66910.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78903.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0523706455323674 -0.58081040109139 0.573530785495882 1 0.213821105365027 1.86176547134840 -0.0523706455323674 0.0696762809645727 AT5G48290_at 3.03324788083898 2.85048664399840 3.95557890101762 3.34376119883183 3.2441232850242 2.76675025158688 1.86834794675413 2.30677776532286 2.60319349702467 2.54065130827591 2.55236864635882 2.38943746171376 2.94000674112291 2.62997380116766 2.22535628263608 2.49606063351649 2.85409362487811 2.9420284268497 2.61454722375970 0.199565745736204 0.205266684810866 0.218320903729192 0.216492769265000 0.207108788187166 0.201091940868118 0.20062935011901 0.216834077616031 0.203022464125303 0.200609912827492 0.199151797719102 0.202743679281160 0.202845977675852 0.200529012932519 0.201926316186251 0.199151797719102 0.211838135960371 0.199151797719102 0.199151797719102 5 5 + 19586310 19586815 19586626.909 19586122 19587025 + gene protein_coding_gene TRUE TRUE AT5G48290.1|AT5G48290.2 heavy-metal-associated domain-containing protein|metal ion binding similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07600.1); similar to Os04g0464100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053015.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE90246.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE92668.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) 0.0725887238557411 0.579925379990093 0.574106015651256 1 0.213315694677505 5.5285324234888 0.0725887238557411 0.157453906338173 AT5G56450_at 3.52731080735673 3.72668676012199 3.71477052559572 3.94983299268805 4.97400946590226 4.20228373520578 3.7488347129331 4.37834954440013 3.78847241737447 3.44557949369699 4.40617113646232 4.46994314830982 4.58432412269854 4.83116780133703 4.83246292447367 4.38236131018359 3.85443714439879 4.10378763789052 3.19194707862021 0.218317631444223 0.2209420326335 0.21975224447543 0.214972452199900 0.217323067425884 0.239893434269348 0.216879999211037 0.234383208730531 0.221795893298697 0.229513337451234 0.214972452199900 0.214972452199900 0.214972452199900 0.215498450498689 0.217595700655874 0.217184025641738 0.219164170964149 0.220750203503473 0.226610998699932 5 5 - 22876087 22876522 22876344.727 22875735 22877288 - gene protein_coding_gene TRUE TRUE AT5G56450.1 mitochondrial substrate carrier family protein similar to AAC1 (ADP/ATP CARRIER 1), binding [Arabidopsis thaliana] (TAIR:AT3G08580.2); similar to Mitochondrial substrate carrier [Medicago truncatula] (GB:ABE94104.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) -0.0786926368572887 -0.577004322333853 0.57600681413665 1 0.211652670640924 7.98196726791706 -0.0786926368572887 0.180413505036105 AT5G18830_at 6.12935348934001 6.0728221190182 7.57255530365495 7.57581364764783 7.37137849851503 7.21982589827108 7.0636419545301 7.03688604818244 4.99292761109518 5.73883951264112 6.36300246626967 7.2763765378467 6.92998230874597 7.26915542393583 6.87085464420738 7.6942659525771 6.9760417152379 7.04285581455813 6.4608891708219 0.224334496185097 0.223967204902846 0.224884144702323 0.232002561409996 0.220443462983132 0.230259047507797 0.226550413327183 0.227455953201902 0.232750668665184 0.226433129138341 0.223855096145178 0.220468682874262 0.220493607600006 0.233030992568250 0.221813920559196 0.219394783726548 0.249738827630256 0.231872993567364 0.230259630650656 5 5 + 6279418 6280177 6279774.455 6276024 6280683 + gene protein_coding_gene TRUE TRUE AT5G18830.1|AT5G18830.2 SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7); DNA binding / transcription factor SQUAMOSA promoter binding proteins Identical to Squamosa promoter-binding-like protein 7 (SPL7) [Arabidopsis Thaliana] (GB:Q8S9G8;GB:Q8VZV0;GB:Q9S723;GB:Q9SMY1); similar to SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G47070.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96886.1); contains InterPro domain SBP; (InterPro:IPR004333) 0.0467511755993584 0.575491474305583 0.576992596764725 1 0.210794457070779 13.3971357646158 0.0467511755993584 0.0283780532825932 AT5G55700_at 6.21278762672256 6.69676527991973 7.26392663407078 7.46008530903693 8.23572521929978 7.91418765642415 6.20342963241744 5.88751384490165 5.39184144163756 5.60044835614372 5.85309545779335 6.177905914966 6.14817606138215 6.20388654228219 4.8152802143415 6.66584065513389 6.67400248785268 5.51010035483725 5.52986691725548 0.253965871184357 0.25178926157167 0.262181681807259 0.259537812839698 0.256357917297962 0.259105208356605 0.260862195151396 0.25178926157167 0.258654796240988 0.25178926157167 0.265515804007286 0.255644118611552 0.25178926157167 0.259943839097305 0.253393249834598 0.25178926157167 0.255979233908623 0.257871473572675 0.265232215504469 5 5|0 +|/ 22570817 22571885 22571289.1 22568975 22572190 + gene protein_coding_gene TRUE TRUE AT5G55700.1 BMY6 (beta-amylase 6); beta-amylase similar to CT-BMY (BETA-AMYLASE 8), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G17090.1); similar to beta-amylase PCT-BMYI [Solanum tuberosum] (GB:AAK84008.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554) -0.0621193058158094 -0.574712207723218 0.577500728141071 1 0.210353214038492 12.7410134167254 -0.0621193058158094 0.119382858735157 AT5G61240_at 7.9251729596428 8.33754357147471 8.57753305419243 8.85442440353952 8.74131632398969 8.53153625212505 8.75727566475425 8.6901886748924 7.48850516095449 8.02250989263526 9.29097184824196 9.80602612275688 9.1865156965296 9.11729839460088 9.32847764994975 9.14827116628092 9.04883119903644 9.10095255508812 7.62018975783177 0.154116142448757 0.142262615292821 0.153709346986265 0.150713974853294 0.146314085907841 0.150290551797524 0.148128623009632 0.156633135414172 0.167776861504119 0.155176459389220 0.149366711327904 0.147531601013826 0.144287933509284 0.145535333806701 0.149858902264677 0.142522302328667 0.151732951800103 0.146561503360456 0.186268437999122 5 0|5 /|+ 24648097 24649160 24648654.429 24646506 24649437 + gene protein_coding_gene TRUE TRUE AT5G61240.1 protein binding similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT1G13910.1); similar to leucine-rich repeat resistance protein-like protein [Gossypium hirsutum] (GB:AAK70805.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0564183851567135 0.57469864517637 0.577509573923778 1 0.210345539486029 17.0337837045102 0.0564183851567135 0.0940288472672769 AT5G54050_at 0.96460599861139 1.16028099147498 1.38506244178236 1.49752578204933 0.802162291819776 0.960112725966946 0.667259658439193 0.968718637902852 0.725225960029412 1.07748730415060 1.04611429855138 0.913850128542676 1.26834107012656 0.619684377160067 1.50223370283303 0.929920420897317 1.10420874933315 0.856099761580512 1.23098592958431 0.187015554163478 0.188395060897765 0.187015554163478 0.192326306990305 0.187015554163478 0.189360542509354 0.187015554163478 0.187015554163478 0.200311268938113 0.202361843117892 0.187100301806221 0.192041823428763 0.191672328986963 0.192805612982980 0.191255124715199 0.18906213900773 0.200782313753583 0.193727554140278 0.192399542358347 5 5 - 21950894 21951404 21951173.636 21950849 21953221 - gene protein_coding_gene TRUE TRUE AT5G54050.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54020.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G29624.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) 0.0519395717287538 0.574171709036041 0.577853309572282 1 0.210047496589338 2.07136088011395 0.0519395717287538 0.0706695924736658 AT5G39700_at 1.67547566021361 1.87548964365077 2.3076333168297 2.3043619362782 1.38069223519198 1.76713357596014 1.14123213171182 1.72294201890806 1.18360726534569 1.40155882052149 1.54951966845313 1.71963833749536 1.16917959331695 1.92205197859396 1.69809825290003 1.18635951111137 1.15090231009262 1.48158616126337 1.7913093804885 0.207452537607814 0.204653207506767 0.217109741014371 0.213860577115833 0.206068390710000 0.209722842999047 0.208757637362476 0.207419521499389 0.213909783548751 0.211250777327471 0.210975411898103 0.206811310670839 0.230386075103818 0.212947423494592 0.208266025572147 0.21558775023251 0.214814415027202 0.209507739466651 0.207612715246294 5 5 - 15911000 15911593 15911300.364 15910989 15911652 - gene protein_coding_gene TRUE TRUE AT5G39700.1 MYB89 (myb domain protein 89); DNA binding / transcription factor Encodes a putative transcription factor (MYB89). similar to MYB110 (myb domain protein 110), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G29020.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABE80439.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0635742276688539 0.573933835384264 0.578008517592018 1 0.209913035486464 3.24361613089566 0.0635742276688539 0.125716751107889 AT5G23460_at 4.87462342275594 5.31164277076294 5.4903059977207 5.85929852664931 5.81016113149394 6.45394154735694 3.91856019514002 4.56271078722977 4.10777303154834 4.08692118573481 4.85353146977516 4.46560040139817 4.74062702681537 4.93982633572837 3.94160581670829 4.83769571397026 4.93614817427971 4.71561954869831 4.56932183321002 0.249208770753234 0.230862484077548 0.235242987397580 0.239356625318463 0.228718378740914 0.233264987660749 0.232416154350763 0.235849790868014 0.228718378740914 0.23482621052709 0.237037991598081 0.233605248926840 0.232275347751457 0.243957572310582 0.235065975009130 0.232954329165693 0.245039608690419 0.232348201198819 0.228718378740914 5 5 + 7913111 7913382 7913246.909 7912772 7913508 + gene protein_coding_gene TRUE TRUE AT5G23460.1 unknown protein -0.0796267222800238 -0.571853883121702 0.579366604389906 1 0.208739536439231 9.75190746126508 -0.0796267222800238 0.186106159290098 AT5G27000_at 1.68732415683429 1.83454185508974 2.2536808836724 1.58904905070020 1.61581245256027 1.96355975634717 1.4389427705849 1.76042819568185 1.90999841836007 2.03078988689497 1.81251369802571 2.11792275525467 2.53993476674739 2.48794899372249 2.11139989139080 2.34367179940145 2.43548496806516 2.27088005842813 2.01074987203371 0.206980756032333 0.214449980343408 0.211454777587236 0.210363785098265 0.208733994350045 0.208957289710481 0.209805989874102 0.206980756032333 0.220781004971237 0.208540845481162 0.216167654378570 0.214850673822483 0.209029746858119 0.211866341941642 0.211431012653908 0.206980756032333 0.214638413508778 0.209917914004956 0.223834334866165 5 5|0 +|/ 9502089 9502893 9502585.2 9498055 9503137 + gene protein_coding_gene TRUE TRUE AT5G27000.1 ATK4 (ARABIDOPSIS THALIANA KINESIN 4); microtubule motor Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. Identical to Kinesin-4 (Kinesin-like protein D) (ATK4) [Arabidopsis Thaliana] (GB:O81635;GB:O04641); similar to microtubule motor [Arabidopsis thaliana] (TAIR:AT2G47500.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G44730.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G09170.1); similar to Kinesin-4, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95490.1); similar to Calponin-like actin-binding; Kinesin, motor re (GB:ABE84966.1); similar to kinesin [Gossypium hirsutum] (GB:AAW03152.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) 0.0678088632608965 0.571444655438928 0.579634008208607 1 0.208509121454007 3.89232522792172 0.0678088632608965 0.143509130481206 AT5G34460_at 1.00807852628923 0.759488367754726 1.23378309525380 0.9968234419873 0.784038388617014 0.77342325750552 0.906530887665764 1.00709812917868 1.68260546212390 1.2565264326777 1.50500872770021 1.17803379954958 1.15880121065364 1.15754680802822 1.61472089280602 1.61474462558196 1.51143860857225 1.76630804521013 1.29473003091883 0.184294813897470 0.184981357134143 0.180755939821132 0.183144288762001 0.185288755919349 0.182588518017504 0.180658669460133 0.1791320466152 0.178975956007499 0.181056322870772 0.184834151112047 0.182008980312244 0.185256861906064 0.178489637275708 0.178608118706363 0.187239580715111 0.182796249035515 0.181114336842766 0.182029678592368 5 5 + 12914584 12914925 12914807.545 12914537 12914949 + gene protein_coding_gene TRUE TRUE AT5G34460.1 replication protein-related similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT5G34950.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) -0.0502860501497286 -0.571354104254282 0.57969318652327 1 0.208458157611949 2.35846433594962 -0.0502860501497286 0.061955840406231 AT5G53650_at 6.90686702977896 7.23418916910678 7.65088932403715 7.6954465216596 7.82815338568227 7.39828812549683 6.60099980670117 6.78239156522123 6.11650167343261 5.83366871662669 7.6088991200072 7.85831500705041 6.84566598419533 7.06704712858283 7.39078639988296 7.36106383604965 7.10409215799255 6.9147092508466 6.28039876807884 0.212263603027281 0.203062236814755 0.210103214299028 0.205746474839955 0.20675138867672 0.209052822606977 0.203306359065723 0.204876476676061 0.217118636944240 0.203062236814755 0.216296718245465 0.206634149712462 0.215891872918207 0.219409917937065 0.213846301676145 0.203482736116693 0.210606420939044 0.212069000594139 0.220645833735089 5 5|0 +|/ 21808507 21809443 21809065.1 21808403 21809667 + gene protein_coding_gene TRUE TRUE AT5G53650.1 similar to Os05g0535700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056158.1) -0.0571183980045364 -0.57132622655232 0.579711406215152 1 0.208442469059422 13.9349924892715 -0.0571183980045364 0.0989310148085784 AT5G01270_at 4.52031349526293 4.83920382825491 5.65357173099393 5.77631609583483 6.07158897428822 5.63314060923868 5.2319502824076 5.30947003272488 4.43841258111743 4.75196195588175 5.76561224491457 5.76188747956555 5.72168641225926 5.44755058222021 5.50403102087495 5.8304099888607 5.62318379261632 6.06728145955737 4.94183996414800 0.201552920981167 0.19556486529767 0.200705111898956 0.200809001488495 0.189427208315587 0.197197161343377 0.192412891555673 0.195859278486489 0.210868242265257 0.202267742689098 0.196617663549268 0.194866299084386 0.191284173607523 0.189427208315587 0.194661679639328 0.192193173808003 0.194310725253731 0.192091851906570 0.195311764076128 5 5|0 -|/ 108274 109366 108828.333 107728 112294 - gene protein_coding_gene TRUE TRUE AT5G01270.1 CPL2 (CTD phosphatase-like 2); double-stranded RNA binding Encodes a Ser-5 specific C-terminal domain phosphatase. similar to CPL1 (FIERY 2), double-stranded RNA binding [Arabidopsis thaliana] (TAIR:AT4G21670.1); similar to C-terminal domain phosphatase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD82046.1); similar to Os02g0639000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047536.1); similar to OSIGBa0155K17.3 [Oryza sativa (indica cultivar-group)] (GB:CAJ86376.1); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159); contains InterPro domain NLI interacting factor; (InterPro:IPR004274) -0.0565222993493942 -0.569183260977331 0.581112879751635 1 0.207238630885088 10.5924161509546 -0.0565222993493942 0.0971272293946963 AT5G42230_at 0.954174518983327 1.01781779707872 0.92317666142729 0.904940200342819 1.01921959611675 1.11021645048665 0.77147377774537 0.819155016078038 0.98752842681733 1.68869124764853 1.24762070176758 1.27113468365518 1.20036251021426 1.56372216690693 1.04745010902217 1.26941381926859 0.964095797036983 1.57540863643987 1.25870201434208 0.193571815184897 0.194711808349077 0.203178925102188 0.197666862093913 0.197758857445710 0.202088155694201 0.193051451623577 0.201614227426136 0.193051451623577 0.204768443650563 0.193961019185968 0.193051451623577 0.212160726347338 0.197788875438683 0.193522418038661 0.197966062084273 0.197647089610061 0.197637727672465 0.196501179679379 5 5|0 +|/ 16900226 16901087 16900593 16898182 16901292 + gene protein_coding_gene TRUE TRUE AT5G42230.1 SCPL41 (serine carboxypeptidase-like 41); serine carboxypeptidase similar to SCPL43, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G12480.1); similar to SCPL42 (serine carboxypeptidase-like 42), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G42240.1); similar to SCPL44 (serine carboxypeptidase-like 44), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT1G43780.1); similar to Os11g0213600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067496.1); similar to Serine carboxypeptidase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93967.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) -0.04561134703824 -0.567307474170297 0.582341112720767 1 0.206188360558298 2.22954256026983 -0.04561134703824 0.021150199379006 AT5G62575_at 6.96058347780343 7.28584078215489 7.89607158405489 7.95870520490023 7.7831047002088 7.22822801157518 6.37838914592299 6.9098107821458 5.66407563315601 6.24125078344256 7.31224989916259 7.88484011362633 7.10189965484258 7.60516815414327 7.8580767652961 7.37396287008122 7.21720313307142 6.96663158816624 6.24237320215819 0.213623802042773 0.209487515777065 0.224365731740073 0.219503698140703 0.224233362566172 0.233615086745278 0.220305924492146 0.212907142731095 0.220478273438574 0.209487515777065 0.213430825137384 0.210037076037866 0.215865927096885 0.217068769507787 0.213663240033563 0.211763738236914 0.237310561690079 0.211285684429187 0.216224126818255 5 5|0 +|/ 25134769 25135761 25135032.25 25134714 25136118 + gene protein_coding_gene TRUE TRUE AT5G62575.1|AT5G62575.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G47833.1); similar to Os09g0382500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063065.1) 0.0676425437845776 0.567239826884506 0.58238543296886 1 0.206150544882572 14.0322103253713 0.0676425437845776 0.144789199900293 AT5G52550_at 6.92416611618277 6.49407785921193 7.80665155525824 7.96364838290452 8.45893065535974 7.3879172434302 7.0061383864868 6.80927400919741 7.08562656991013 6.27905159762265 8.0087834276072 8.24034405568194 8.00244298528954 7.88335329510159 7.55101990870436 8.11121079019949 6.97300798408938 7.4255330968715 6.69682569509147 0.232530335597648 0.217605426906606 0.227655193803121 0.220472015619152 0.221868115160462 0.240851502585918 0.221242276500473 0.232031231250478 0.234772562245852 0.226909195198532 0.222130123000511 0.224142522447555 0.220153516199816 0.229314703912371 0.222291045559170 0.220234157338729 0.237329565692364 0.224536801087722 0.220916718285646 5 5 - 21345188 21345590 21345373 21344938 21347362 - gene protein_coding_gene TRUE TRUE AT5G52550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25670.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE85314.1) 0.0842066732230429 0.566516849560836 0.582859216424700 1 0.20574665538486 14.5871654745796 0.0842066732230429 0.204427975288399 AT5G60200_at 1.99009447464971 2.36128811189509 2.38452562878578 2.57044180785840 2.95741293160463 2.71816401290283 3.23995942635647 3.04023901293928 2.77701229558469 3.07378675285174 3.70072280113547 3.71296141294609 3.53763450254329 3.82620138137596 4.34093509059115 3.36839010588986 3.2766735967451 4.19263231066132 3.08877974470693 0.211506721464909 0.207335656310346 0.207966049979875 0.213710914377539 0.212330804173259 0.204573760558505 0.203647919241352 0.206321869968552 0.212689082326845 0.206845969706676 0.210005256031912 0.20888800522506 0.212555564373571 0.208096113696844 0.216424799668759 0.203647919241352 0.211466720370603 0.205858218243414 0.20535133623067 5 5 + 24258640 24259001 24258808 24258201 24259749 + gene protein_coding_gene TRUE TRUE AT5G60200.1 Dof-type zinc finger domain-containing protein Identical to Dof zinc finger protein DOF5.3 (AtDOF5.3) (DOF5.3) [Arabidopsis Thaliana] (GB:Q84TE9;GB:Q8LDE1;GB:Q9LSS6); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G45610.1); similar to elicitor-responsive Dof protein ERDP [Pisum sativum] (GB:BAA85655.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) -0.0546987774819148 -0.565805146948967 0.583325812692406 1 0.205349535851715 6.01995492484927 -0.0546987774819148 0.0898348463268038 AT5G04500_at 1.11896484535489 1.14963266661016 1.03997960505742 1.44732672552816 1.13491119422802 1.18294934879389 0.624896075744528 1.07480341891627 1.20251320771583 1.1566549982431 1.23668394089266 1.16538014341341 1.15568343834954 1.39404257191604 0.985479841875373 1.34232275769977 1.34109052695871 1.15934949978298 1.13904264150028 0.190289597761279 0.196591217785787 0.192264378177979 0.192185382059202 0.191551308998645 0.199466309628847 0.191656053277789 0.190289597761279 0.193551317056771 0.193722131742578 0.195731417115641 0.193769785301454 0.200044974863726 0.192399605850685 0.190292600225756 0.191798672746504 0.198197876251368 0.206224866934777 0.196024296840696 5 5 + 1285557 1286071 1285776.455 1283469 1286360 + gene protein_coding_gene TRUE TRUE AT5G04500.1 glycosyltransferase family protein 47 a member of the Glycosyltransferase Family 64 (according to CAZy Database) similar to EPC1 (ECTOPICALLY PARTING CELLS), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G55830.1); similar to Os05g0540000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056178.1); similar to putative exostoses [Oryza sativa] (GB:AAK14423.1); similar to Os03g0684500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050920.1); contains domain Nucleotide-diphospho-sugar transferases (SSF53448); contains domain alpha-L-arabinanase (SSF75005); contains domain EXOSTOSIN-RELATED (PTHR11062:SF2); contains domain EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED (PTHR11062) 0.0579526911597225 0.565505210710563 0.583522512399723 1 0.205182315970815 2.2909701713279 0.0579526911597225 0.105491896482675 AT5G09670_at 7.23227322601838 7.63670356285825 8.54354100701674 8.47517230316231 8.78034758428937 8.49004490391083 7.33385736251698 7.0396938334383 7.9903457878698 8.07034710874517 8.81319623589454 8.5538728038372 8.98814604002223 9.04426743589803 8.15440728870676 8.91582942732075 8.624792586139 8.63616502100796 8.19479787994675 0.165749648807486 0.168004777037557 0.156533524291184 0.160639200278325 0.156299661807502 0.156180168677361 0.162764187336623 0.183659004789788 0.178158920131339 0.158866265220660 0.153560920589584 0.155567248682745 0.153115716358765 0.155455316355231 0.155238359044769 0.152914890693401 0.179025193538428 0.154275603319675 0.157576856346600 5 5 - 2996110 2996679 2996360.909 2995913 2998933 - gene protein_coding_gene TRUE TRUE AT5G09670.1|AT5G09670.2 loricrin-related similar to loricrin-related [Arabidopsis thaliana] (TAIR:AT5G64550.1); similar to Os04g0458200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052976.1); similar to B0414F07.3 [Oryza sativa (indica cultivar-group)] (GB:CAH68133.1); similar to OSJNBa0036B21.17 [Oryza sativa (japonica cultivar-group)] (GB:CAE03375.1) 0.0568030692347872 0.564275902503808 0.584329069217285 1 0.204497822653733 16.3422033214217 0.0568030692347872 0.100765676233751 AT5G14990_at 1.05865619836150 1.05470443297786 0.658079261322905 1.5087420471591 0.834116125603753 1.03995564767389 0.839375370743532 1.19411520885358 0.8208439704711 0.942560813033886 0.799170918350042 0.544126572353697 1.12308225633973 0.998747340867722 0.498827056613262 0.659263453419413 0.913236492525935 1.03681467898498 0.684939229167971 0.19734594114242 0.202835642618103 0.202272136451347 0.197976424961000 0.205102827090325 0.206764055905002 0.204376118810593 0.204553075026362 0.207358121903684 0.19734594114242 0.209183418239837 0.199585826948801 0.19734594114242 0.198266884280765 0.210829929337858 0.198861395613761 0.202314505918628 0.199001868025642 0.208694706961886 5 5|0 +|/ 4852200 4852818 4852564.333 4850767 4853006 + gene protein_coding_gene TRUE TRUE AT5G14990.1 similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G34730.1); similar to Viral A-type inclusion protein repeat [Entamoeba histolytica HM-1:IMSS] (GB:XP_653447.1); similar to Os04g0521600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053337.1); similar to OSIGBa0131L05.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67527.1) -0.0722398582796799 -0.564233456759908 0.584356928761593 1 0.204474213298491 1.84235467012343 -0.0722398582796799 0.163429314743356 AT5G64710_at 1.51226829937047 1.30299529193233 1.58961439375703 1.36150854821767 1.25343646743064 1.62245031633502 1.54129717909255 1.48179794120118 1.18995440191144 1.08039709757392 1.18676849564445 1.15325436231104 1.4694639798479 1.68865820612088 1.20320908296813 1.35097188477208 1.41543941886174 0.832693952821288 1.35962418601657 0.205853072803376 0.190916119826781 0.201597235895507 0.195271814780141 0.193282196460157 0.190305797787949 0.194028403167971 0.192048725738669 0.191197042284997 0.197638191108967 0.191232817122373 0.193535412689203 0.200183020015136 0.195314319151607 0.201047745812314 0.18938063042688 0.197570126906830 0.216681522292060 0.18938063042688 5 5 + 25888747 25889285 25889015.455 25886486 25889455 + gene protein_coding_gene TRUE TRUE AT5G64710.1|AT5G64710.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09840.1); similar to 80C09_3 [Brassica rapa subsp. pekinensis] (GB:AAZ41814.1); contains InterPro domain Protein of unknown function DUF537; (InterPro:IPR007491) -0.0533617185856729 -0.563683667013502 0.584717850944225 1 0.204168557309816 2.70694571370999 -0.0533617185856729 0.0839874859950847 AT5G01720_at 5.16095742953092 5.1882239482585 5.72892716768187 5.87700665272612 5.38063616178176 5.46599938276691 4.5953195018688 4.22214463790977 4.24170552969066 4.46661958410077 5.5019503281338 5.79129714672031 4.89519958225425 5.55403528969173 5.67560859587987 5.84360826630566 5.64448388795129 4.86283492991927 4.25903023309815 0.188820494354571 0.187234404466301 0.186040437275228 0.197097227590137 0.189975954012257 0.198544626587831 0.193705382350324 0.190684048643364 0.193861722284921 0.185631089324892 0.201277694865646 0.189727073157879 0.195581212855658 0.189555845599363 0.184903183722065 0.185770293854505 0.193095158121426 0.188402003000212 0.191353993701461 5 5 - 267334 267908 267674.545 266720 270480 - gene protein_coding_gene TRUE TRUE AT5G01720.1 F-box family protein (FBL3) similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G27920.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91133.1); similar to Os12g0108500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065951.1); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype; (InterPro:IPR006553); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, cysteine-containing; (InterPro:IPR007089) 0.0510472464563209 0.56335155313788 0.584935932369606 1 0.203984053713226 10.0991913781424 0.0510472464563209 0.0711878308542657 AT5G58020_at 8.64631407709397 9.21158768930368 9.59514373322797 9.62801681246527 9.96830358809404 9.6412370485267 9.15347706168233 9.17776847652786 8.9068605084613 8.81618123950437 9.49187991506883 9.6500530966696 9.67684384320467 9.78156556907907 9.28556197495195 9.6744951218121 9.12671184038933 9.45364234790826 8.7231177411559 0.132004579765304 0.124722814439912 0.130658490197886 0.124722814439912 0.13160787716632 0.125752502363408 0.132517184807733 0.128891268763169 0.133080350582508 0.131724390910261 0.124821882142072 0.124722814439912 0.124722814439912 0.125279715566587 0.130390562430967 0.124722814439912 0.136692364513891 0.136445344549007 0.135036784277317 5 5 + 23503280 23503851 23503545.364 23502726 23504044 + gene protein_coding_gene TRUE TRUE AT5G58020.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54721.1); similar to Os06g0183900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056989.1); contains InterPro domain Protein of unknown function DUF602; (InterPro:IPR006735) -0.0594040371499074 -0.562758492514514 0.585325471415397 1 0.20365483651432 18.5442214158699 -0.0594040371499074 0.113238791026849 AT5G52510_at 6.39707563781205 6.44393993725938 7.20330461707785 7.43617183087756 7.33951533338092 6.68704557888424 6.60445846144036 7.01446015159105 6.35884290903316 6.13527416489795 7.95034177226599 8.12407355779796 8.25117545781483 8.34989859288893 7.39567327086308 8.2302044155406 7.70689298239969 6.8998316330286 6.15119475621304 0.208387112485911 0.205645995746521 0.207036813955671 0.204845736350501 0.209540250838092 0.210785508563364 0.216721111398726 0.20800499880413 0.219259821051264 0.207537394586699 0.205641512976071 0.209867170865427 0.209040620418095 0.211738803800047 0.210617042952511 0.205585373726859 0.202677981556954 0.224423171596657 0.215472085136317 5 5 + 21325794 21326059 21325929.818 21324275 21326528 + gene protein_coding_gene TRUE TRUE AT5G52510.1 scarecrow-like transcription factor 8 (SCL8) similar to SCL1 (SCARECROW-LIKE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G21450.1); similar to GRAS10 [Solanum lycopersicum] (GB:ABD72965.1); contains InterPro domain GRAS transcription factor; (InterPro:IPR005202) 0.0657045951239354 0.562240599656109 0.585665751166707 1 0.203367612065546 13.9300541453936 0.0657045951239354 0.139547054072091 AT5G58575_at 5.50990552167462 5.9117785783842 5.70725490747778 6.14200057338294 7.09094715927702 6.94578229164042 4.50050807623467 5.06933631057204 4.98733708200327 4.80114884307264 5.37299329610839 5.5651217424369 5.04864695443183 5.69559048251052 5.42397762320382 5.76203776016671 5.03849764480779 5.37026996885001 4.6205567061543 0.277426982620184 0.263396601783309 0.283709372825857 0.269877450892362 0.270262578725052 0.267350017246714 0.279716960900151 0.259558619219076 0.267460588934137 0.267106070856884 0.260195174810503 0.264630839567634 0.274968664289157 0.264760223490146 0.263165247751168 0.260068269510155 0.270509829470954 0.259931574762616 0.27715312538055 5 5 + 23691827 23692339 23692126.333 23691226 23692724 + gene protein_coding_gene TRUE TRUE AT5G58575.1 similar to hypothetical protein [Platanus x acerifolia] (GB:CAL07976.1); contains InterPro domain Sgf11, transcriptional regulation; (InterPro:IPR013246) -0.0668968638614673 -0.562077001166854 0.585773264892844 1 0.203276931548545 10.9660172495677 -0.0668968638614673 0.144284853594980 AT5G02600_at 5.98378378459949 6.23462709638344 7.36310429098679 7.64405656708089 7.53444169531079 7.2374489842997 6.73495072816562 6.9001893240241 6.14180677028634 6.39908057435707 7.29896049041197 7.37375831017437 7.05477423190655 7.15270804448876 6.82813145597415 7.44237169010534 7.27525114624076 7.1209553622472 6.06566635970726 0.220468958461139 0.207496651269259 0.217283294030460 0.205880466637488 0.212599953847345 0.216980852309855 0.215382949685231 0.209597539172683 0.22945724198395 0.213409696862814 0.202992791760952 0.20270402625939 0.20270402625939 0.214438079911036 0.212164706001430 0.20270402625939 0.226661496072696 0.205111991799673 0.215547766283112 5 5|0 -|/ 585771 586437 586202.4 584160 586904 - gene protein_coding_gene TRUE TRUE AT5G02600.1|AT5G02600.2 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G53530.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE91607.1); similar to Os03g0819400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051712.1); similar to Os01g0976300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045566.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.0538188624695692 -0.560833148393732 0.586591044114178 1 0.202588289636503 13.6518495136366 -0.0538188624695692 0.0877926303637924 AT5G67320_at 7.14248991685747 7.2581876686083 7.83449930628122 7.82971946405773 8.42916458398275 7.86660759622928 6.90882406738591 6.33207495543651 6.62420000327046 6.3359275315731 7.54238275620643 7.66440330567907 7.55351895791441 7.48958905200171 7.31529487842011 7.5369787807754 7.50871597106638 7.43070063093162 6.29936372170428 0.191868739012240 0.193105112679935 0.20628634759828 0.198064464726943 0.199929919225625 0.204093911288224 0.192670733223251 0.201442969966821 0.205294563854381 0.212911672902135 0.190498825650375 0.191957859396790 0.192404366650163 0.199208706433485 0.201440776634461 0.194421998038934 0.196903553164766 0.197272129128089 0.188528306852017 5 5|0 +|/ 26877141 26878168 26877601.333 26874380 26878345 + gene protein_coding_gene TRUE TRUE AT5G67320.1 WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to putative WD-40 repeat protein family [Oryza sativa (japonica cultivar-group)] (GB:BAC84349.1); similar to Os07g0405100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059429.1); contains InterPro domain LisH; (InterPro:IPR013720); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) 0.0657746395084806 0.559997404539904 0.587140850188889 1 0.202126395465004 14.4127101750917 0.0657746395084806 0.140858281241828 AT5G50770_at 2.01390458737060 1.67956570872367 2.23366245332993 2.42827110649589 1.90215953244275 1.88755601845897 1.96749340864034 1.94537419720007 1.96239369439156 2.12022562706980 2.00299272776949 2.18621347449128 2.03216037113307 1.76168378812597 1.82058325788903 2.38200705888921 2.25579729898173 2.19839649610809 2.04507296215884 0.186623955139675 0.184058144911622 0.182043570551708 0.187741455100956 0.189433003289804 0.190774916688767 0.191099008890444 0.193213916220181 0.195384365737528 0.196832502580500 0.182043570551708 0.182043570551708 0.190868475638678 0.185484485087033 0.195327060365732 0.194650813606353 0.206049157716505 0.186676958716770 0.192286951962737 5 0|5 /|- 20664039 20664956 20664486.8 20663906 20665951 - gene protein_coding_gene TRUE TRUE AT5G50770.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G50700.1); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G50600.1); similar to steroleosin [Sesamum indicum] (GB:AAL09328.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) -0.0500625711927945 -0.559811702606178 0.58726305402753 1 0.202023850530104 4.06852007843955 -0.0500625711927945 0.0671036135559411 AT5G17970_at 0.338554670131942 0.781762927135015 0.532371598205396 1.15147174000350 0.721750217112776 0.732468717004887 0.866790610539122 1.16897053306252 0.728259082099201 0.873109657360548 0.728239242895086 0.69088686457198 0.62920784262663 0.583313438964823 0.822870877069014 0.734437147292695 0.634343497091694 1.01726530135471 0.640600914286642 0.197171793770287 0.200578215565269 0.196457761020521 0.206309013537914 0.19619390163606 0.209800574254251 0.199215060698305 0.204353908790108 0.204106968754042 0.206553032191165 0.194919201095501 0.207833708993225 0.197362878473594 0.202630769416922 0.193361649454503 0.193361649454503 0.207834918201 0.204771711172194 0.198250171904356 5 5|0 -|/ 5949022 5949663 5949247.5 5949001 5951621 - gene protein_coding_gene TRUE TRUE AT5G17970.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18370.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41550.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18360.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44392.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0658067835386071 -0.558298147434076 0.588259574240909 1 0.201189252919932 1.52546449884879 -0.0658067835386071 0.141772453481093 AT5G17610_at 5.13513012811361 5.52868555741685 6.46387726283448 6.30585095357099 6.92580369983495 6.38609583975889 5.14129065910598 5.70365284034528 4.69012710745326 4.93441692307064 6.16508057114571 5.93506695203075 6.08869174557602 5.89950640742214 5.72525278717807 6.05183060257374 5.70235145216173 5.3809132388404 5.00380909638405 0.209580643932099 0.204701387458548 0.208259473714716 0.226222354396028 0.206656856722559 0.221363225714615 0.210644512077578 0.213984996700852 0.205993497609402 0.204701387458548 0.215115511073817 0.204701387458548 0.216681024482772 0.215080333864126 0.214653622691981 0.206532170800935 0.216727532350675 0.208754328412999 0.210993839780376 5 5|0 +|/ 5804013 5805023 5804447.571 5803938 5805297 + gene protein_coding_gene TRUE TRUE AT5G17610.1 similar to Putative DNAJ protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05335.1); contains domain alpha/beta-Hydrolases (SSF53474) 0.0687357240794586 0.557345855681442 0.588887019442661 1 0.200665231612557 11.3211505819153 0.0687357240794586 0.153560442564398 AT5G16730_at 5.98269456652483 6.44515957132719 7.03972360452589 7.06631073878958 7.79032843579607 7.76908635665794 6.864676204545 7.34729609429864 7.97128600450356 8.09116083049209 9.50037398771157 9.21487481109878 8.94477238287182 9.32461680727273 8.7693809138068 9.13487187302483 8.5389230825686 9.00408235261328 8.04457527283192 0.213821609591511 0.20464066869004 0.211494762271997 0.202868583621626 0.209157506736704 0.208872274525610 0.203872467166905 0.210597273839716 0.211268784097692 0.205249832085834 0.204600952089685 0.202868583621626 0.202868583621626 0.205869121559112 0.204489653174825 0.202868583621626 0.204800712495888 0.206583645762945 0.202868583621626 5 5 + 5500193 5500671 5500428.636 5497646 5500848 + gene protein_coding_gene TRUE TRUE AT5G16730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02930.1); similar to Protein kinase PKN/PRK1, effector [Medicago truncatula] (GB:ABE94710.1); contains InterPro domain Protein kinase PKN/PRK1, effector; (InterPro:IPR011072) -0.0591958926350111 -0.55523594650055 0.590278455872924 1 0.199507196046966 15.5829899777149 -0.0591958926350111 0.115824381173498 AT5G62790_at 10.5625654296428 10.3735087513527 11.1944567698293 11.1677299103949 11.4240853570006 11.0511780513384 11.2348098272183 10.9868325936425 10.5509432102457 10.7633105196448 11.4030876797422 11.4723663012858 11.3980568366226 11.4528858084019 11.5409286668598 11.7553699250589 11.4567306781213 11.4918769791532 10.6590163403415 0.0706139610877738 0.0687468524594042 0.0687831835453656 0.0704364970769478 0.0699787867483155 0.0757107264331714 0.0695829275901288 0.0710731962520075 0.0773524104883122 0.0709837327821108 0.072074522842362 0.0687468524594042 0.0705828311527249 0.0687468524594042 0.0747473202967576 0.0687468524594042 0.0756439929655792 0.0713776273193895 0.0700285678599287 5 0|5 /|- 25231606 25232363 25232035 25231351 25234665 - gene protein_coding_gene TRUE TRUE AT5G62790.1 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype. Identical to 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) (DXR) [Arabidopsis Thaliana] (GB:Q9XFS9;GB:Q9M6U2); similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis] (GB:ABD92702.1); similar to 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Lycopersicon esculentum] (GB:AAK96063.2); similar to 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Picrorhiza kurrooa] (GB:ABC74566.1); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; (InterPro:IPR013512); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase; (InterPro:IPR003821); contains InterPro domain 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; (InterPro:IPR013644) 0.0525874607083088 0.554989574759450 0.590441045535571 1 0.199372242495516 22.0764806110439 0.0525874607083088 0.0842492454143622 AT5G46740_at 3.60906266855958 3.62850495308029 4.38586001633227 4.50351188154359 3.8379730500348 3.99894151083486 2.81000030313074 3.50791586393945 3.01655553782616 3.19489633174304 3.48994881487178 4.07020552876535 3.37699233194432 3.82431836454613 4.37167592399144 3.55120443195081 3.6866564653994 3.43908429269239 3.18368085459735 0.217662363658576 0.216115626019555 0.225305283481909 0.221867032814747 0.224224258906907 0.228170754486508 0.224854826578343 0.220431302424577 0.222956748298023 0.217675330393868 0.219643702878204 0.228993741230137 0.218059881142889 0.21704487577616 0.216908435203831 0.216115626019555 0.226910750887200 0.2251642584454 0.224856905996216 5 5 - 18982733 18983536 18983277.727 18982498 18985969 - gene protein_coding_gene TRUE TRUE AT5G46740.1 UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin-specific protease Encodes a ubiquitin-specific protease. similar to ubiquitin-specific protease 20, putative (UBP20) [Arabidopsis thaliana] (TAIR:AT4G17895.1); similar to Os02g0795000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048381.1); similar to putative ubiquitin-specific protease 23 [Oryza sativa (japonica cultivar-group)] (GB:BAD72518.1); similar to Os06g0184300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056992.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394) 0.0613903787516425 0.554352226740472 0.590861764340105 1 0.199023387293265 7.2142071195948 0.0613903787516425 0.125654482453302 AT5G38800_at 1.00926604757773 1.16963785413487 1.45432222388807 1.58795308990326 1.07069224632981 1.63161418425490 1.32748855439572 0.95188964470326 1.18947822606885 1.71428360351061 1.90011012867083 1.31107642030758 1.31996325467603 1.23802412215957 1.39088897339999 1.49089812525874 1.46523442665441 1.79556262151982 1.60509446164901 0.200059978724116 0.198065562139112 0.202342730628353 0.201804928250293 0.203782080784781 0.200330403935231 0.200205123947152 0.199772083285148 0.206850849194872 0.203308532258524 0.201548984047305 0.202149074943647 0.206510077879332 0.198065562139112 0.203178778742666 0.202143815851520 0.198065562139112 0.204265035658286 0.2071509849841 5 5 - 15555561 15555992 15555794.818 15555427 15556032 - gene protein_coding_gene TRUE TRUE AT5G38800.1 bZIP transcription factor family protein similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT3G30530.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96858.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) 0.0601656146848666 0.550435864951923 0.593450454823788 1 0.196888019804842 2.77131890872696 0.0601656146848666 0.122280514363672 AT5G10850_at 2.63975646385251 2.32161350193733 2.9045079804036 2.44659636220929 2.58855161987664 3.05865246447372 2.32632725731849 2.68084125083423 3.10704925618392 2.47850924722009 3.17404312788087 2.88314240932429 3.09523028759296 3.08394509287611 2.58828993004735 2.8523347685269 3.34370967263341 2.82091528671908 2.45767177860658 0.245658898777559 0.249170839257092 0.248163740960847 0.245658898777559 0.246789421599978 0.250914999649335 0.251816766308686 0.245658898777559 0.245658898777559 0.245658898777559 0.255109443449777 0.245658898777559 0.245658898777559 0.250000589947129 0.250572362707914 0.245658898777559 0.253852866413146 0.245658898777559 0.249903093769318 5 5 + 3428184 3428643 3428418.182 3428160 3428825 + gene protein_coding_gene TRUE TRUE AT5G10850.1 similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G01050.1); similar to unnamed protein product [Ipomoea batatas] (GB:BAE79383.1) -0.0644390521884427 -0.549743144939066 0.593908957873795 1 0.196511800767152 5.45149490392339 -0.0644390521884427 0.14033153782133 AT5G05930_at 8.47315342374088 8.29195593875997 9.1322576607772 9.12016255747365 9.51004315130722 9.23555215011724 8.57058489160697 8.20378890177784 7.89960192130683 7.92099404235373 8.77809137074021 8.4600141695272 8.45568131246271 8.49438584860427 8.32229971609514 8.74053599100927 8.97072562835384 8.70401391076191 7.9158532505357 0.119166370698587 0.117618788130288 0.124056131622576 0.122368688143788 0.125839502969459 0.119335306765552 0.115828430476582 0.119397890402244 0.131586672837539 0.130546989002187 0.123936894826188 0.120042149539649 0.120803441973195 0.126818366664563 0.132602066674152 0.115828430476582 0.121569341390343 0.123973543707717 0.126272719576435 5 5|0 -|/ 1780423 1782304 1781458.556 1779975 1783413 - gene protein_coding_gene TRUE TRUE AT5G05930.1|AT5G05930.2 guanylyl cyclase-related (GC1) similar to guanylyl cyclase [Glycine max] (GB:ABK15530.1) -0.0522322862472566 -0.549217763593613 0.594256825401394 1 0.196226761150027 17.0811214502 -0.0522322862472566 0.0852833729540322 AT5G15980_at 4.10341117337947 5.26483078829052 5.36322760277441 6.04680983890241 5.46705970819381 4.94235925699558 4.80776732757399 5.21459487391111 3.76551656557190 3.52673186992676 4.67351669618732 4.93653817046244 4.4657328695525 4.18488901632317 4.17218910951661 4.74434822980474 4.41556983882856 4.49272104732625 3.46213675785861 0.278274879031456 0.265450098079950 0.265908224113055 0.282731754734201 0.268418120969006 0.294329184457121 0.266109934586495 0.268706457087399 0.279410185965226 0.274511416510909 0.266453377770132 0.265450098079950 0.265450098079950 0.271348013535837 0.271504197628568 0.265450098079950 0.290218327638255 0.268893454382877 0.267412914213678 5 5 + 5214784 5215271 5215081.727 5213084 5215623 + gene protein_coding_gene TRUE TRUE AT5G15980.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G02490.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96873.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) -0.0979304845631315 -0.548755263061189 0.594563146463947 1 0.195976048956091 9.19899916460397 -0.0979304845631315 0.259985442456321 AT5G40260_at 0.686928604321188 1.20526212554631 1.35773609679104 1.52114209504107 0.693050868252437 0.798958707337855 1.22619157646831 1.08737041156376 1.35119071678648 1.55039291717755 1.03466105101003 1.45671820819711 1.46363180653328 1.73008881687085 0.876988595607242 1.50047030809512 1.78652455831154 1.34516684769998 1.26270727015622 0.232890537299618 0.222464138789485 0.240936965864671 0.231846652865285 0.222464138789485 0.237856190400124 0.232290845022049 0.227501112696068 0.234981939503525 0.223343896710646 0.223325922757361 0.228250924669340 0.243110589641253 0.225649442103074 0.226586564534594 0.225046259244743 0.234108641196551 0.228090605142219 0.232012614009211 5 5|0 +|/ 16107915 16108637 16108304.111 16106985 16108981 + gene protein_coding_gene TRUE TRUE AT5G40260.1|AT5G40260.2 nodulin MtN3 family protein similar to nodulin MtN3 family protein [Arabidopsis thaliana] (TAIR:AT4G10850.1); similar to Os01g0605700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043522.1); similar to senescence-associated protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB92465.1); contains InterPro domain MtN3 and saliva related transmembrane protein; (InterPro:IPR004316) -0.0547677005134095 -0.548109405204259 0.594991046291245 1 0.195626274923209 2.46576918170561 -0.0547677005134095 0.0987866213146273 AT5G15060_at 2.19535754372009 1.68236951058012 2.39174499452679 2.34012108831347 1.77041807074115 2.20744847789748 2.04336759759853 2.31241413058326 1.92965113170382 1.86228702963797 1.66632903702500 1.91124257377126 1.94104571011914 1.77914226627191 2.37538780668793 1.98018903138489 2.32835317960587 2.45029672789309 2.02104274848790 0.192519566766363 0.189086671649146 0.194851286837760 0.192224570479543 0.189046598749093 0.197172418836467 0.203380640388461 0.193676846981286 0.196905501288291 0.191017964010883 0.188113744626734 0.194673166101647 0.193788478219397 0.195138643398500 0.188528568412635 0.192445010738179 0.200409511689475 0.189297929693251 0.193393267777375 5 5|0 -|/ 4874995 4875546 4875296 4874988 4875759 - gene protein_coding_gene TRUE TRUE AT5G15060.1 unknown protein -0.0607289186337494 -0.547877158306092 0.595144956115503 1 0.195500592853234 4.11373447418083 -0.0607289186337494 0.12589097755857 AT5G20890_at 8.9354820207216 9.07032273896302 9.47039662946196 9.47516383494696 9.5648416788279 9.56526959766952 8.95800268666344 8.92577604274058 8.35558738046751 8.41350280886632 9.28442584763899 9.6120460283909 9.37474184043713 9.1028630113985 9.64170725895866 9.24498248953082 9.2490184426532 9.20902784204911 8.56089799343773 0.102174144746231 0.101661999248857 0.105591443771944 0.101351639953446 0.100335259210843 0.104601591635955 0.103598870358806 0.0978388254903948 0.117468970507436 0.103321524806105 0.105287603143372 0.100208807919523 0.0995349101553232 0.105701733944094 0.106889604186226 0.100816724187945 0.100186023179068 0.101688082092537 0.101991026267389 5 5|0 -|/ 7087100 7087711 7087405.556 7086655 7090083 - gene protein_coding_gene TRUE TRUE AT5G20890.1 chaperonin, putative similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G11830.1); similar to chaperonin containing TCP1, subunit 2 (beta) [Gallus gallus] (GB:NP_001012551.1); similar to Protein kinase; GroEL-like chaperone, ATPase [Medicago truncatula] (GB:ABE90681.1); similar to Cct2-prov protein [Xenopus laevis] (GB:AAH42347.1); contains InterPro domain T-complex protein 1, beta subunit; (InterPro:IPR012716); contains InterPro domain Chaperonin TCP-1; (InterPro:IPR002194); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423); contains InterPro domain GroEL-like chaperone, ATPase; (InterPro:IPR008950); contains InterPro domain Chaperonin Cpn60; (InterPro:IPR001844) -0.04395729369849 -0.544684272123454 0.59726298987215 1 0.193777821785117 18.1372473984440 -0.04395729369849 0.0240062969292616 AT5G47850_at 1.82071775979917 1.61124861173314 1.85378589352483 2.16186257499153 1.52864583150180 1.89968097075114 1.35504194724793 0.668683337423358 2.04638532691438 1.48628979715758 1.55325948240085 1.58678292824482 1.61859073668012 0.97652369191222 1.44510840008965 1.44253897582709 1.44266810371803 1.38993961890224 1.19407537112378 0.214410556067628 0.225776445088075 0.219884211149742 0.218399976385286 0.218117545420677 0.220315617359696 0.211817916351139 0.209925025470837 0.224653178098814 0.215363365271986 0.209925025470837 0.220705704599128 0.211047830136915 0.216653143608405 0.213565951812965 0.21363403641214 0.218167030739905 0.227212470386271 0.218541032030705 5 5 - 19396064 19396602 19396370.727 19395927 19398308 - gene protein_coding_gene TRUE TRUE AT5G47850.1 protein kinase, putative similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G55950.1); similar to cytokinin-regulated kinase 1 [Nicotiana tabacum] (GB:AAG25966.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II; (InterPro:IPR009091); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0660294505750252 0.543524018042041 0.598033629434954 1 0.193154137102724 3.11621336118184 0.0660294505750252 0.149624125303513 AT5G57450_at 1.43852376197687 1.81625619428942 2.13495011279642 2.49153941983460 1.96931287442306 1.66195954645863 1.68891923034378 1.72004602731880 1.75409067938123 2.10360240401668 1.85742441768164 1.91133907171958 1.57890310392902 1.92647409268960 1.79242753103232 1.72000117580956 2.03844676529597 1.96140522152385 2.28787941040362 0.176830483611627 0.176080698143846 0.176334649897715 0.178637376445829 0.179726815781359 0.179926342750132 0.179224322370909 0.180315556483724 0.180105536574171 0.183421097633644 0.179572841346546 0.181865659580469 0.177643869855284 0.176539980127398 0.176080698143846 0.180389844807668 0.184766480897465 0.182400645796520 0.188297813508844 5 5 - 23291236 23291760 23291456.818 23290319 23292202 - gene protein_coding_gene TRUE TRUE AT5G57450.1|AT5G57450.2 XRCC3 (Arabidopsis thaliana homolog of XRCC3); ATP binding / damaged DNA binding Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation Identical to DNA-repair protein XRCC3 homolog (X-ray repair cross-complementing protein 3 homolog) (AtXRCC3) (XRCC3) [Arabidopsis Thaliana] (GB:Q9FKM5); similar to ATRAD51C (Arabidopsis thaliana Ras Associated with Diabetes protein 51C), ATP binding / damaged DNA binding [Arabidopsis thaliana] (TAIR:AT2G45280.1); similar to Os02g0562100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047150.1); similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_001204119.1); contains InterPro domain Rad51, C-terminal; (InterPro:IPR013632); contains InterPro domain RecA bacterial DNA recombination; (InterPro:IPR001553) -0.0555027178001083 -0.543453852347036 0.598080250022721 1 0.193116460291957 3.81360181446055 -0.0555027178001083 0.104590417736203 AT5G52790_at 0.601579822562834 0.591696583556869 0.581292715381272 0.0877602237898175 0.899556062362029 0.839794415086262 0.394422878496608 0.645136867438192 1.09606318779184 0.528738370377934 1.09920703530344 1.01082559878614 1.14403508317364 1.346471614429 0.317089724540102 0.585798605886112 0.881181401978987 0.830766844735378 0.573424899869346 0.245619875054014 0.240356281972533 0.240356281972533 0.255284502949853 0.244611838936911 0.250905900373722 0.252562175123721 0.243037949255355 0.244439478947099 0.240356281972533 0.240356281972533 0.240356281972533 0.240960388478214 0.253963559529356 0.257912555001872 0.241392872926071 0.248206485263677 0.249634326655143 0.240356281972533 5 5 - 21409116 21409699 21409332.5 21408943 21411585 - gene protein_coding_gene TRUE TRUE AT5G52790.1 CBS domain-containing protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47330.1); similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G14520.1); similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G33700.1); similar to CBS [Medicago truncatula] (GB:ABE86592.1); similar to Os03g0125800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048820.1); contains InterPro domain Protein of unknown function DUF21; (InterPro:IPR002550); contains InterPro domain CBS; (InterPro:IPR000644) 0.0537794659041042 0.543093303299469 0.5983198415076 1 0.192922928842101 1.39748701672614 0.0537794659041042 0.0963684472773292 AT5G28170_at 1.04692871591424 0.909049954879914 1.43729179385583 1.21775574927490 1.39467037777033 1.30026546790536 1.29666780699756 0.921093815176175 1.61442252626109 1.70314933821353 1.31041329606934 1.13678202607894 1.55964261469703 1.56093570694841 1.74485331407698 1.73337356537193 1.57911420207064 1.52706222973045 1.27142483252923 0.238097572727194 0.238097572727194 0.259510106389603 0.246138031365274 0.238097572727194 0.240112086229954 0.26221184748724 0.253133314796774 0.238097572727194 0.257786832853697 0.254799661163891 0.259697969433261 0.310873798649157 0.238097572727194 0.238097572727194 0.238097572727194 0.263276778873585 0.244817302449191 0.262711941738972 5 0|5 /|+ 10153976 10153979 10153977.5 10152151 10154738 + gene protein_coding_gene TRUE TRUE AT5G28170.1 similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35110.1) 0.0506356627567015 0.541201888887818 0.59957753925516 1 0.191909658961962 2.714809302746 0.0506356627567015 0.0806469525422229 AT5G42650_at 10.0134455404166 10.0604502856646 9.99604325221521 10.0193764815014 10.1063954261525 9.9564708665223 10.4269282911944 10.4831057588032 8.68625740594785 10.0838051354562 11.0327987384670 11.2031724551290 11.0324194982578 10.7829192268514 10.8775887709437 10.9044692313869 10.6052403106051 10.7400215805715 9.5959065905049 0.0937699943794278 0.089685511884123 0.0899540909581233 0.0922268861417495 0.0965532158216438 0.0902298776049109 0.095169317689133 0.0922885159195985 0.106763222098041 0.096747922014918 0.0911078800107417 0.0927602892642643 0.0893856098285162 0.0940231976462398 0.0944988946421611 0.0909853341594922 0.0940842160222139 0.0904563734157031 0.0936691507133352 5 5 - 17115067 17115548 17115311.091 17114823 17116623 - gene protein_coding_gene TRUE TRUE AT5G42650.1 AOS (ALLENE OXIDE SYNTHASE); hydro-lyase/ oxygen binding Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. Identical to Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92) (Allene oxide synthase) (Hydroperoxide dehydrase) (CYP74A) [Arabidopsis Thaliana] (GB:Q96242;GB:P93720;GB:Q9ZR51); similar to HPL1 (HYDROPEROXIDE LYASE 1), heme binding / iron ion binding / monooxygenase [Arabidopsis thaliana] (TAIR:AT4G15440.1); similar to allene oxide synthase [Hevea brasiliensis] (GB:AAY27751.1); similar to allene oxide synthase [Solanum tuberosum] (GB:CAD29735.1); similar to allene oxide synthase [Citrus sinensis] (GB:AAO72741.1); contains InterPro domain Cytochrome P450; (InterPro:IPR001128); contains InterPro domain E-class P450, group IV; (InterPro:IPR002403) -0.0439550009353142 -0.540378195749714 0.600125683755733 1 0.191469430602822 20.3091028730569 -0.0439550009353142 0.0291571005944114 AT5G40270_at 3.61193286293353 3.91662076378363 4.77172056573283 4.97131967678255 5.06489832647344 5.35328478414596 4.33811413486626 4.27732890646543 3.69691757138980 4.3646516294141 4.67524020617041 4.26705317411741 4.6708085229509 4.56383890720902 4.30289447691131 5.08768358508121 4.64167466904587 4.6433229585455 4.07203829950708 0.215514693785111 0.215514693785111 0.222595668532844 0.215514693785111 0.217278948666753 0.229989885088328 0.217147153712810 0.228782881614567 0.220413351784095 0.223177117626534 0.216019228770984 0.217215824256456 0.219397557445744 0.220496901750971 0.217025151550927 0.217180778117479 0.218796590137141 0.221044995065975 0.217314370032018 5 5|0 -|/ 16110649 16111756 16111334.4 16110400 16114460 - gene protein_coding_gene TRUE TRUE AT5G40270.1 metal-dependent phosphohydrolase HD domain-containing protein similar to metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40290.1); similar to Os01g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041793.1); similar to Metal-dependent phosphohydrolase (ISS) [Ostreococcus tauri] (GB:CAL49984.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain Metal-dependent phosphohydrolase, HD subdomain; (InterPro:IPR006674) -0.0505959395225249 -0.539953425882085 0.600408457696068 1 0.191242656438404 8.86370270061843 -0.0505959395225249 0.0810842110268743 AT5G27150_at 8.35424889551978 8.63280473676272 9.57789017066756 9.7771853364368 10.1615857511594 9.67471654717544 9.5361251884802 9.56180084158428 8.77221614142284 8.71988398771064 9.62409573237753 9.60069659912151 9.60170739899741 9.45410236326857 9.25683250062501 9.66377719609384 9.56311777348818 9.52900728321566 8.67181395790791 0.137646776547636 0.131999602907958 0.137290776687979 0.138152436154387 0.133905461889316 0.144869967187055 0.133256393915574 0.129022410589723 0.146244760312261 0.132746372722881 0.130881760666530 0.130493757870895 0.129022410589723 0.137108217557456 0.136315906663602 0.129483663153208 0.149547684685374 0.136591032563688 0.138661470755155 5 5 + 9556413 9557239 9556968.091 9553441 9557516 + gene protein_coding_gene TRUE TRUE AT5G27150.1 NHX1 (NA+/H+ EXCHANGER); sodium:hydrogen antiporter Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. Identical to Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1) (NHE-1) (NHX1) [Arabidopsis Thaliana] (GB:Q68KI4;GB:O04655;GB:Q8LRL1;GB:Q9ZPK3); similar to NHX2 (sodium proton exchanger 2), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G05030.1); similar to NHX4 (sodium proton exchanger 4), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G06370.1); similar to sodium proton exchanger [Thellun (GB:ABF48496.1); similar to Na+/H+ vacuolar antiporter [Brassica napus] (GB:AAO38856.1); similar to Na+/H+ antiporter [Thellun (GB:ABJ97691.1); contains InterPro domain Sodium/hydrogen exchanger subfamily; (InterPro:IPR004709); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.0547106077407393 0.538705944710439 0.601239318815131 1 0.190577628722437 18.5385305842627 0.0547106077407393 0.103111072020405 AT5G08560_at 8.8146785118335 9.10523908219217 9.64932181263575 9.74852956880196 9.66683066155432 9.40826692762994 8.65831048124059 8.8009098127856 8.98054622759273 8.96849967608857 9.70000353177483 9.72383073708823 9.86331279691921 9.70399490199224 9.4266749842363 9.8226794743511 9.3378349418673 9.36874602700851 9.07596006018293 0.113079073002397 0.106534053743125 0.109826057494104 0.106676220767715 0.108546620783604 0.120469086870329 0.109181048327126 0.113540224869953 0.120036677259323 0.110929691588184 0.106534053743125 0.107727082021965 0.107488587785472 0.112182766464462 0.108427794381262 0.108614460180134 0.114336339341617 0.118314502600061 0.109437465716422 5 5 - 2771110 2771932 2771623.545 2770875 2774673 - gene protein_coding_gene TRUE TRUE AT5G08560.1|AT5G08560.2 transducin family protein / WD-40 repeat family protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G43920.1); similar to PREDICTED: similar to WD-repeat protein 26 [Danio rerio] (GB:XP_693216.1); similar to Os02g0294600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046605.1); contains InterPro domain CTLH, C-terminal to LisH motif; (InterPro:IPR006595); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Lissencephaly type-1-like homology motif; (InterPro:IPR006594) -0.0491648032836161 -0.538055660163102 0.601672664462959 1 0.190231539376997 18.5448708551806 -0.0491648032836161 0.0737175082834876 AT5G21150_at 0.53279532859336 0.303294249055463 0.458077628630086 0.748856855182865 0.415548115594957 0.262899176800502 -0.00516646795895027 0.332196983237294 0.320432477931110 0.678581934153793 0.78998039460314 0.645446602667385 0.307894854019916 0.685246648914306 0.644264798173038 0.507658450359247 0.349876172300994 0.655134171554687 0.66313597601671 0.181701763394606 0.179523719129141 0.180319914104447 0.178270146233293 0.182494779560095 0.180800976055362 0.179148665205605 0.178292435839984 0.181528342740585 0.180668009913166 0.189256159379391 0.182560336384553 0.180704749241824 0.193043425513563 0.180468553044224 0.177101558184499 0.180464553066060 0.189484888564480 0.182831899794025 5 5|0 +|/ 7197092 7198086 7197668.889 7192242 7198327 + gene protein_coding_gene TRUE TRUE AT5G21150.1 PAZ domain-containing protein / piwi domain-containing protein similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G21030.1); similar to AGO4 (ARGONAUTE 4) [Arabidopsis thaliana] (TAIR:AT2G27040.1); similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G32940.1); similar to AGO4-2 [Nicotiana benthamiana] (GB:ABC61505.1); similar to Argonaute and Dicer protein, PAZ; Stem cell self-renewal protein Piwi [Medicago truncatula] (GB:ABE82627.1); similar to AGO4-1 [Nicotiana benthamiana] (GB:ABC61504.1); contains InterPro domain Argonaute and Dicer protein, PAZ; (InterPro:IPR003100); contains InterPro domain Stem cell self-renewal protein Piwi; (InterPro:IPR003165) 0.0519651270964003 0.535952449479558 0.603075336871357 1 0.189114884547124 0.944681679112594 0.0519651270964003 0.090641516590466 AT5G45240_at 1.31277475094239 1.27918015897127 1.34987267983586 1.29521659881122 0.908766384331121 1.54710337644767 0.947198330291392 1.20895992601564 1.52218233835255 1.58851621996823 1.33859251397971 1.05834597570828 1.55991535698906 1.22828407401549 1.39046628322197 1.50564672161553 1.79422823017992 1.66208626932381 1.28959746670197 0.207860969593175 0.204879919107009 0.215059489153000 0.213125967269831 0.211880346340658 0.210307341131009 0.204711856930375 0.213781207054925 0.208799367634684 0.204379016404768 0.226628575064614 0.208820049737221 0.205453613291427 0.20581854204266 0.205307138058561 0.204525385795308 0.202950532242659 0.217933591467668 0.209810447874253 5 5|0 +|/ 18335399 18336130 18335701.143 18330933 18336316 + gene protein_coding_gene TRUE TRUE AT5G45240.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G51560.1); similar to disease resistance protein [Phaseolus vulgaris] (GB:ABA00702.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) -0.0579737289772614 -0.535268284889026 0.60353198323613 1 0.188752531221021 2.68561453560756 -0.0579737289772614 0.119909416999339 AT5G12970_at 1.50670101302674 0.874423360007165 1.25390538638795 1.31037297402521 0.785936812220434 1.22296218129646 0.692696306427814 1.00735610752498 1.28895102801089 1.17987606928548 1.40127271008030 1.08572150328311 1.38845658735073 1.40407489538803 1.46932079760230 1.03926080709149 1.11874682833556 1.30941949197465 0.902261996506933 0.215296060576669 0.209788156236954 0.208594011964075 0.206604577480388 0.206604577480388 0.207845798578004 0.210019354993749 0.208624078037075 0.216300426912205 0.222827217862572 0.207080643170545 0.206604577480388 0.213245302062437 0.206604577480388 0.213578653800704 0.214025840696731 0.212252792289363 0.217953196225542 0.213295179434307 5 5 + 4104802 4105270 4105086.818 4102138 4105330 + gene protein_coding_gene TRUE TRUE AT5G12970.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G51570.1); similar to NTRB (NADPH-dependent thioredoxin reductase B) [Arabidopsis thaliana] (TAIR:AT4G11610.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G57880.1); similar to C2 [Medicago truncatula] (GB:ABD33426.1); similar to C2 [Medicago truncatula] (GB:ABE89860.1); similar to C2 [Medicago truncatula] (GB:ABE85066.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoribosyltransferase C-terminal, plant; (InterPro:IPR013583); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.0635889301541973 0.534749033316206 0.603878677219187 1 0.188477812081544 2.28215955123428 0.0635889301541973 0.14405858364115 AT5G49970_at 9.53214226488313 9.67013030542762 10.5108602353271 10.4377801294683 10.5673970795291 10.2885240848561 10.1118807016937 10.2664652873233 9.45016738411804 9.9993028200084 10.8046472950256 10.6550806807273 10.6763235796123 10.61567371615 10.4973271976906 10.8218923349377 10.5271206157871 10.5429606051435 9.97784676983788 0.0988537639839398 0.0912459318313768 0.0912175612875942 0.0898823924565037 0.0916215650025758 0.0934265396561954 0.0932609805221257 0.0926406313458625 0.103559055168694 0.0959060348772667 0.0916205813426987 0.0905799121096987 0.0933153575953127 0.0936431951429042 0.0913247174568765 0.0910477377942444 0.0953480750671623 0.0991566302225356 0.0948518524733112 5 0|5 /|+ 20348516 20350079 20349512.571 20346413 20350381 + gene protein_coding_gene TRUE TRUE AT5G49970.1|AT5G49970.2 pyridoxamine 5'-phosphate oxidase-related encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group) similar to Putative pyridoxamine 5-phosphate oxidase [Oryza sativa] (GB:AAM08545.1); similar to Os10g0377800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064477.1); contains InterPro domain YjeF-related protein, N-terminal; (InterPro:IPR004443); contains InterPro domain Pyridoxamine 5' (InterPro:IPR000659); contains InterPro domain Pyridoxamine 5' (InterPro:IPR011576); contains InterPro domain FMN-binding split barrel; (InterPro:IPR009002); contains InterPro domain Pyridoxamine 5-phosphate oxidase, FMN-binding; (InterPro:IPR012349)|similar to Putative pyridoxamine 5-phosphate oxidase [Oryza sativa] (GB:AAM08545.1); similar to Os10g0377800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064477.1); contains InterPro domain YjeF-related protein, N-terminal; (InterPro:IPR004443); contains InterPro domain Pyridoxamine 5' (InterPro:IPR000659); contains InterPro domain Pyridoxamine 5' (InterPro:IPR011576); contains InterPro domain FMN-binding split barrel; (InterPro:IPR009002) 0.0469523460184134 0.534306853113994 0.604173993070859 1 0.188244067247072 20.3990144666247 0.0469523460184134 0.0614399973741035 AT5G07550_at 0.712212697280703 1.02103569807411 1.06120859734704 1.40384513443593 1.19445158349845 0.963219123337006 0.898077189802877 0.747836779023867 1.18312194754837 1.54302568808089 1.04523966350962 1.08002054341577 1.19637161676312 0.948754427647207 1.46383256653620 1.09321890302549 1.54608313837289 1.19706406039195 1.6519239280816 0.178612394006436 0.185880174572243 0.183582259174693 0.200561694744079 0.178809291530412 0.183875710384802 0.187903759906033 0.184989565980217 0.189489098610717 0.189368248419878 0.18883223297013 0.182565946595149 0.182959209651482 0.183380504017464 0.181157878987711 0.184046924752933 0.192893193936368 0.184152806788330 0.187359531801862 5 5|0 -|/ 2388611 2389155 2389029 2388311 2389243 - gene protein_coding_gene TRUE TRUE AT5G07550.1|AT5G07550.2 GRP19 (Glycine rich protein 19) member of Oleosin-like protein family similar to GRP20 (Glycine rich protein 20), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G07560.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15462.1); contains InterPro domain Oleosin; (InterPro:IPR000136)|similar to GRP17 (Glycine rich protein 17) [Arabidopsis thaliana] (TAIR:AT5G07530.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15462.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.052193586848885 -0.533677859833617 0.604594202613599 1 0.187911883882474 2.32807600178070 -0.052193586848885 0.0930017200131137 AT5G66500_at 1.02526241237460 1.25997691695557 1.6940925999881 1.35448458723508 1.38363764316731 1.56202267579536 1.07485961664044 1.16014039420385 1.23105913495042 1.54097986795607 1.30194725238232 0.70804448611915 1.14864918777752 1.04179322833163 1.05199081526338 1.08276766477341 1.59973550158008 1.05552333052153 1.48839286871316 0.185880602116198 0.193628936888071 0.190849743202116 0.188732044409796 0.190499261477084 0.186811274397561 0.187827466087218 0.185880602116198 0.190064437638444 0.192227634463798 0.198072496513665 0.191268443942771 0.198899492030303 0.188570322273758 0.189183632530389 0.191877755915807 0.191942115051913 0.190405037032091 0.195423492859470 5 5 - 26565392 26565874 26565590.364 26565221 26566903 - gene protein_coding_gene TRUE TRUE AT5G66500.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G13600.1); similar to hypothetical protein [Thellun (GB:ABB45856.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.049568470739943 -0.532438246030494 0.605422787546191 1 0.187258301326571 2.58628480107013 -0.049568470739943 0.079212647555129 AT5G50500_at 0.523512998457221 0.319080536422922 0.849347422031699 0.797670209806635 0.999210113285613 0.396549864086158 0.946489058860683 0.403678357937943 0.759041882917232 0.905764610949662 1.09218662055726 1.01831657701208 1.02163744736304 1.09382042020465 0.668442926504247 0.865722678202464 1.18734900777503 1.04744340832959 1.24694814633849 0.192753114576978 0.186867740739578 0.191394324622897 0.193700704955382 0.188366775974382 0.186867740739578 0.192343522454058 0.199709260073529 0.190326311409024 0.18923442982117 0.191679694045310 0.191065918855674 0.193902529761900 0.186867740739578 0.191182649628568 0.193520553619296 0.193927741877676 0.189247735113778 0.193860380464579 5 5 - 20579454 20579746 20579635.2 20579376 20579783 - gene protein_coding_gene TRUE TRUE AT5G50500.1 unknown protein 0.0634919640087937 0.531948242505056 0.605750477466262 1 0.187000344162606 1.63941720301711 0.0634919640087937 0.145026209791565 AT5G66370_at 0.696291532469896 1.21873910679586 1.36888736530244 1.36851221700160 0.611149983300488 0.907744820244835 0.702853902594839 1.23403754060166 1.93382025875550 1.48973574486278 1.51502845367134 1.21030964999506 1.66714910324059 1.21949786410270 1.21934334310062 1.51932216639248 1.91394958298291 1.65882130143908 1.22144794749067 0.18420435027342 0.184552727127551 0.187605427170257 0.185085426077388 0.180923327891509 0.188733794553284 0.186760760672701 0.180129965881503 0.188586801181841 0.187539489525457 0.181208514610238 0.180000902333805 0.188352258783520 0.179500309746851 0.179063909802546 0.180683247250696 0.182687506853634 0.185525068477331 0.186250209844235 5 0|5 /|- 26529445 26529885 26529594.3 26529426 26530050 - gene protein_coding_gene TRUE TRUE AT5G66370.1 metal ion binding similar to metal ion binding [Arabidopsis thaliana] (TAIR:AT3G51020.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE87754.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.0619498436669234 -0.531692352468289 0.605921640159648 1 0.186865722693779 2.53290822528157 -0.0619498436669234 0.138776047454657 AT5G20310_at 0.726412281452019 0.894020192570686 0.927536607188906 1.09190480318489 1.00168844717606 0.92815969335568 1.06413593425448 0.835317569260931 1.20853327874464 0.759460601497238 0.79762757556775 0.895024458047642 0.579305931776655 0.992889407314972 0.803297712418264 1.17085205049923 0.97701944774723 1.14848852675246 1.01514635246500 0.208671033564480 0.213816965982318 0.209554063841856 0.208660501633652 0.210382459043986 0.209977292117601 0.209494039414008 0.206926328840536 0.21439022545727 0.216719496330085 0.210785485680025 0.208093009038497 0.206754159116026 0.211657911262147 0.208398068058985 0.208983680530837 0.211987235261547 0.228581168703675 0.215978962698909 5 5 + 6858439 6858947 6858642.273 6857555 6859003 + gene protein_coding_gene TRUE TRUE AT5G20310.1 similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79207.1); contains domain no description (G3D.3.40.50.1420); contains domain Adenine nucleotide alpha hydrolases-like (SSF52402) -0.046233774135819 -0.531285647520848 0.606193732762632 1 0.186651884699755 1.8911185492227 -0.046233774135819 0.0581406079289647 AT5G01110_at 2.34363611766659 2.15997132809398 2.73680298776464 2.49377804274485 2.71963739811299 3.17642275216463 2.71282527929578 2.45635966063292 2.19443778709861 2.07969472317872 2.48510847700148 2.79064888095409 2.33652699597642 2.58114992715374 2.5659476801108 2.54860296809911 2.55815774701908 2.63410309488105 2.49757417536481 0.170493904640433 0.165605810648366 0.162468211555462 0.160696568346673 0.162268959087976 0.166369347513731 0.170483107022342 0.160712911149279 0.165963843598482 0.162090985002413 0.162621962479176 0.159283211248789 0.169229559475288 0.161814599054956 0.167803236271921 0.162687236746652 0.174437600017387 0.170225701353143 0.163286898579075 5 5 - 42115 42645 42445.545 41769 44374 - gene protein_coding_gene TRUE TRUE AT5G01110.1 pentatricopeptide (PPR) repeat-containing protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:AAM15782.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain SinR repressor-like, dimerisation; (InterPro:IPR010981) 0.0543052264979902 0.531167182522803 0.606272999673243 1 0.18658962703729 5.00981233744964 0.0543052264979902 0.104869034751914 AT5G58690_at 2.46034717616274 2.26960380617435 2.67970185988441 2.82910916037592 2.90780670463516 3.10864284632535 2.58197687503992 2.20283196560692 2.69833865492694 2.53723731362965 3.06982388455667 2.4974883443085 2.77485664019882 2.92277321670417 2.05428230983577 2.70228937490229 2.68007782453132 2.99602389370078 2.77594076994818 0.199946517708226 0.199703462793491 0.205077287528304 0.203096586418786 0.205630441268827 0.212278853134889 0.208361242923786 0.209788767157667 0.202964696712943 0.206275004018866 0.204647744281099 0.204706113870717 0.199703462793491 0.213353816176521 0.204013564771183 0.202108806617622 0.211173347715583 0.207077431555556 0.201676293989661 5 5|0 -|/ 23726914 23727632 23727156.9 23726755 23729357 - gene protein_coding_gene TRUE TRUE AT5G58690.1 phosphoinositide-specific phospholipase C family protein similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT5G58700.1); similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to phosphoinositide-specific phospholipase C [Nicotiana rustica] (GB:CAA65127.1); similar to phosphatidylinositol-specific phospholipase C 1 [Lilium davidii] (GB:AAW81961.1); similar to 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase [Nicotiana rustica] (GB:CAA72681.1); contains InterPro domain Phosphatidylinositol-specific phospholipase C, X region; (InterPro:IPR000909); contains InterPro domain Phosphatidylinositol-specific phospholipase C, Y domain; (InterPro:IPR001711); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain Phosphoinositide-specific phospholipase C (PLC); (InterPro:IPR001192); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.0504591090569989 -0.530596821931053 0.606654711899777 1 0.186290065338301 5.32135630707254 -0.0504591090569989 0.0852707592807846 AT5G05280_at 1.08467103925729 1.13799925689307 1.38601068906086 1.48778156708841 1.28284759205298 1.18141716151479 1.78676011378267 1.16915864180173 0.724877263403763 1.09880864361417 0.86999189142875 0.85681044918736 1.07448779429383 0.970641828476608 1.08776616210578 0.977056761857476 1.28742745313018 1.07226242553035 1.24185003476341 0.182877183706945 0.187219026333690 0.184725667716092 0.188950143628152 0.188004177362270 0.182877183706945 0.188412759462053 0.187275564416029 0.185174258064910 0.195283516099889 0.188621947108878 0.186819292475215 0.184846976174856 0.186354508832309 0.183728310662050 0.187489649211796 0.195922008870966 0.192940809786817 0.195584208938910 5 5 - 1565520 1566015 1565778.455 1565448 1566392 - gene protein_coding_gene TRUE TRUE AT5G05280.1 zinc finger (C3HC4-type RING finger) family protein Identical to Putative RING-H2 finger protein ATL5B precursor (ATL5B) [Arabidopsis Thaliana] (GB:Q9FLC6); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G10910.1); similar to Os04g0419500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052775.1); similar to Zinc finger, RING-type; RINGv [Medicago truncatula] (GB:ABE81190.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0551640828543116 -0.52887773438341 0.607805951206935 1 0.185389014459339 2.33778121252068 -0.0551640828543116 0.110120561177252 AT5G46850_at 3.32095744303396 3.91374552645724 3.95512091382587 4.37774661977573 4.58508160979622 4.81394983572652 3.79708587584911 3.08683049557887 3.28578591797476 2.94073827801247 3.29361980739108 3.77244369818608 3.41970621057725 3.92672918253762 3.77300646625377 3.6006150314761 3.27380820942596 3.64136679899105 2.93538107139580 0.224857400005901 0.235996007452321 0.224218905156988 0.227032742481184 0.2240326351262 0.236948747573949 0.222739060701663 0.222278976136557 0.23903197170702 0.225682886343628 0.224824777563926 0.221009705723969 0.223599089345638 0.224545266788566 0.223144835364170 0.221009705723969 0.228486181384820 0.231481871828456 0.226673015588637 5 5|0 +|/ 19028488 19029179 19028854.1 19027941 19029237 + gene protein_coding_gene TRUE TRUE AT5G46850.1 similar to hypothetical protein MtrDRAFT_AC150505g14v1 [Medicago truncatula] (GB:ABE89245.1); contains InterPro domain PIG-X/PBN1; (InterPro:IPR013233) 0.0719760169772311 0.527755687841632 0.608557966251271 1 0.184802389614130 7.30212996403838 0.0719760169772311 0.180413414467764 AT5G42800_at 1.03449823844800 1.09473432571265 1.11843034401536 1.16731024495115 1.17140610037288 1.34173557145545 0.893655005982933 1.31846394418026 0.764812198053064 1.27439870013677 1.11400498622564 1.0315547000857 1.10048368874871 0.88270214833904 1.04660119907504 1.03871453900123 1.15937697770418 0.657695638158124 1.18334369934303 0.240825760159112 0.240825760159112 0.245897451807024 0.251440394829778 0.241344073350121 0.240968219580648 0.240825760159112 0.244587839605183 0.267236462372228 0.258953561909875 0.251625663935859 0.240825760159112 0.250174988559709 0.254095977134791 0.249421603194933 0.245206262551097 0.253529747523863 0.267614926004104 0.258711328240176 5 5|0 -|/ 17181678 17182249 17182015.75 17181369 17183146 - gene protein_coding_gene TRUE TRUE AT5G42800.1 DFR (DIHYDROFLAVONOL 4-REDUCTASE); dihydrokaempferol 4-reductase dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Identical to Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4- reductase) (TRANSPARENT TESTA 3 protein) (DFRA) [Arabidopsis Thaliana] (GB:P51102;GB:Q9FEB1); similar to BAN (BANYULS) [Arabidopsis thaliana] (TAIR:AT1G61720.1); similar to dihydroflavonol 4-reductase [Brassica oleracea] (GB:AAO73442.1); similar to dihydroflavonol-4-reductase [Brassica rapa subsp. pekinensis] (GB:AAV80210.1); similar to dihydroflavonol 4-reductase [Brassica rapa] (GB:AAX53571.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509) -0.0492813704821377 -0.527300973817227 0.608862858778684 1 0.184564992700773 2.18156752214558 -0.0492813704821377 0.0803339794004636 AT5G19170_at 0.867780286782875 1.19229404917607 1.11483345873902 1.20589966345166 0.897605195061642 0.59196211387001 1.30764886145439 0.7277618274683 0.782041553233581 0.89272403683953 1.1849042029882 1.11364006612721 0.830011174715165 0.649624107045393 0.700435765446572 1.24838438170281 0.821147842173345 1.37078947294491 1.04758238531903 0.198215242182887 0.197046441295288 0.203687954706438 0.199250771388769 0.202434456337603 0.203012630736557 0.19649794164225 0.200968875729816 0.195223493837314 0.204986234322864 0.200711861133219 0.196428037778752 0.205133478025869 0.204790318856221 0.199086814518130 0.199824426658706 0.203391975423574 0.201711620975965 0.199247600146756 5 5 + 6446685 6447221 6446912.364 6445247 6447421 + gene protein_coding_gene TRUE TRUE AT5G19170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18460.1); similar to putative carboxyl-terminal proteinase [Gossypium hirsutum] (GB:AAK84952.2); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.0586410093713706 -0.525640449299294 0.60997692717143 1 0.183699709630589 1.93688140788733 -0.0586410093713706 0.127555363390742 AT5G58360_at 1.32431083256477 1.12080293659145 1.73040475468636 1.70489764606627 1.56644584506081 2.33553687409962 1.72648417724632 2.18206439493586 2.17743877733107 1.78770248524044 2.03462035088774 2.25799305762793 1.79377434382669 1.87492021917136 2.42652178435155 1.60547168757456 1.62919095677050 2.72591608684102 1.64045576625420 0.234221514005726 0.229511983470863 0.228125087059450 0.237364910372289 0.230201345683336 0.222603585959780 0.225402064464804 0.230043598136335 0.225882806830649 0.231530765654065 0.233241145362291 0.22451855959767 0.236224500559824 0.238613714362360 0.222603585959780 0.228446732089081 0.230128535416923 0.229563314237589 0.23595718272722 5 5 - 23607311 23607871 23607721.455 23607305 23608195 - gene protein_coding_gene TRUE TRUE AT5G58360.1 ATOFP3/OFP3 (Arabidopsis thaliana ovate family protein 3) similar to ATOFP2/OFP2 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G30400.1); similar to Os01g0823500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044660.1); similar to ovate family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87078.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) 0.0659197007127515 0.524134071786939 0.610988473985326 1 0.182916983296310 3.66741013456809 0.0659197007127515 0.158712961994404 AT5G50850_at 10.2717456904918 10.2701504773642 10.9499708264094 10.9123991254280 10.7785642676752 10.6302697761509 10.5650056076382 10.3717191165905 10.1850867343461 10.1560398764035 10.8842503519073 10.8977466150467 10.8208098066247 10.7895829823915 10.8339227669925 10.8364140382822 10.6731230466186 11.0234090287064 10.0927899751264 0.104049174515671 0.100117322811665 0.100975104292250 0.101009924906441 0.104621578411049 0.101713449284337 0.103840977748142 0.105797327860370 0.102692871054537 0.101683741016339 0.100769236124703 0.101588698813427 0.100311119029080 0.104573000970888 0.102137033249551 0.101016489390666 0.103315194741028 0.0992496673914705 0.0990897492204796 5 5|0 +|/ 20708978 20710154 20709522.4 20706616 20710511 + gene protein_coding_gene TRUE TRUE AT5G50850.1 pyruvate dehydrogenase E1 component beta subunit, mitochondrial / PDHE1-B (PDH2) Identical to Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) (PDH2) [Arabidopsis Thaliana] (GB:Q38799;GB:Q9LSM8); similar to PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA), pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] (TAIR:AT1G30120.1); similar to pyruvate dehydrogenase E1 beta subunit (GB:AAA52225.1); contains InterPro domain Transketolase, C-terminal; (InterPro:IPR005476); contains InterPro domain Transketolase, C-terminal-like; (InterPro:IPR009014); contains InterPro domain Transketolase, central region; (InterPro:IPR005475) -0.0437926171076188 -0.524060279455491 0.611038048150512 1 0.182878694765085 21.0885012067335 -0.0437926171076188 0.0426589754764709 AT5G40040_at 2.67409135832226 2.14116668932361 2.86076284285616 3.11317356802623 2.46060130199329 2.90631509041006 2.60919215316397 2.78145016619886 2.18033328717083 2.73829895110051 2.80119003344226 2.56036557201855 2.41406847182828 2.88238491841424 2.76406078409858 2.61919489803483 2.74349770970943 2.89881826493947 2.51432270946471 0.199900722644203 0.200519985616720 0.198234259671575 0.205057865140002 0.204163049749379 0.199828487171003 0.203888631445563 0.198368720647391 0.202964133889109 0.196582464583246 0.200264839590226 0.204377184415954 0.199489176029522 0.211007933658730 0.205534617581287 0.200470275778649 0.200345065131101 0.204318228716680 0.201428523766413 5 5 - 16047145 16047461 16047336.818 16046980 16047541 - gene protein_coding_gene TRUE TRUE AT5G40040.1 60S acidic ribosomal protein P2 (RPP2E) Identical to 60S acidic ribosomal protein P2-5 (RPP2E) [Arabidopsis Thaliana] (GB:Q9LUK2); similar to 60S acidic ribosomal protein P2 (RPP2C) [Arabidopsis thaliana] (TAIR:AT3G28500.1); similar to 60s acidic ribosomal protein-like protein [Solanum tuberosum] (GB:ABA40434.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) -0.0593101921517017 -0.523888943459695 0.611153160666975 1 0.182789813542115 5.28739376168983 -0.0593101921517017 0.13134535260888 AT5G07820_at 4.74509052981189 5.30454895189585 6.04531738249736 5.90099869264894 6.3057567643025 5.36867308884286 4.59434193863976 4.40170963851639 4.65321090871909 4.88102763276428 5.24839709340644 5.45054709130058 4.66586332175936 5.1218495275807 4.94234283882985 5.039362201855 4.48093895623011 4.91306735467377 3.716325452952 0.205054560769568 0.201716185297424 0.209478543533976 0.207800118211065 0.219029727103924 0.220794622258313 0.205368019410745 0.216294335657376 0.225542326616281 0.202791814884517 0.211691082039965 0.201716185297424 0.224868409546376 0.201716185297424 0.205121847767881 0.208567803008913 0.213460567181814 0.208059217760696 0.211109697424766 5 5 - 2498872 2499435 2499255.727 2498750 2501210 - gene protein_coding_gene TRUE TRUE AT5G07820.1 similar to chromosome scaffold protein-related [Arabidopsis thaliana] (TAIR:AT5G61260.1); similar to Os03g0211400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049347.1); similar to erythrocyte binding protein 2 [Plasmodium falciparum] (GB:AAQ73468.1); similar to erythrocyte binding protein 3 [Plasmodium falciparum] (GB:AAQ73469.1); contains InterPro domain Calmodulin-binding, plant; (InterPro:IPR012417) -0.0748693374722874 -0.523725340548641 0.611263087979842 1 0.182704969542654 10.0331299799026 -0.0748693374722874 0.193407817618034 AT5G60840_at 7.4718643661366 7.63534783999991 8.37293748202608 8.54959963116007 8.80437327030746 8.59542007384619 8.101419939808 8.10397324078371 8.03075881121736 7.68850372822078 9.54625866528694 8.99606864257158 9.24566420401056 8.86475512663765 8.90226206316418 8.52091074643573 8.74482141697199 9.196798821593 8.09103189471434 0.146853219106796 0.137564328496895 0.137927117213769 0.135813883385856 0.141669114140686 0.13893982438319 0.137156102489214 0.138689899068634 0.143355112379669 0.148134816024749 0.143512467486975 0.132905702465840 0.139128669693842 0.139096206668744 0.135216385589236 0.138065838889759 0.135738003656077 0.133767240713525 0.143071721057435 5 5|0 -|/ 24490754 24491586 24491164.75 24490545 24491717 - gene protein_coding_gene TRUE TRUE AT5G60840.1 unknown protein 0.0451787213384993 0.523591122476094 0.611353278671511 1 0.182635383151801 16.6738456166176 0.0451787213384993 0.0551619223106312 AT5G41410_at 9.1892357911942 9.47975108913957 9.66427561802718 9.80123911511874 10.3253480414479 9.8374410998904 9.05220741171267 9.16563700190265 8.49911463129459 8.2607568668091 8.79801400325026 9.19269104424822 9.5278961014755 9.2645782513284 8.31956755563821 9.58354050766808 8.69039514748084 9.0604838524815 8.23100790922274 0.165917966015576 0.165692149679109 0.172727074807450 0.172068797397386 0.167297122818524 0.172677276491408 0.169834891529203 0.165910404218405 0.177561248672382 0.181872705864896 0.167346490518687 0.168053638839145 0.165692149679109 0.171713152904184 0.175975546404898 0.167116811946452 0.178342837498064 0.165692149679109 0.17830617879496 5 0|5 /|+ 16600583 16600897 16600742.1 16597272 16601236 + gene protein_coding_gene TRUE TRUE AT5G41410.1 BEL1 (BELL 1); DNA binding / transcription factor Homeodomain protein involved in ovule morphogenesis. similar to BLH4 (BLH4), DNA binding [Arabidopsis thaliana] (TAIR:AT2G23760.3); similar to bell-like homeodomain protein 3 [Lycopersicon esculentum] (GB:AAP47023.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain POX; (InterPro:IPR006563) -0.053078841308384 -0.522907272497579 0.611812911201429 1 0.182281097838360 18.2568613679151 -0.053078841308384 0.102975173034425 AT5G10900_at 1.80668369827620 1.81528277638489 2.21796105243271 2.42962864653806 2.27418610386640 1.98540066915618 2.11760100711721 2.13270828008507 2.66879330428512 2.00358217664323 2.73606244794229 2.53781451820767 2.23771762271198 2.62092583324086 2.96246775003144 2.34952398599657 2.79059675931118 2.49588810513162 2.26103488107989 0.187490420813273 0.182397900279043 0.185046853644816 0.181374991767650 0.185912057730996 0.184708493888342 0.188373322962406 0.180723530333127 0.195911621370471 0.187696358833270 0.18092087960064 0.183172496473054 0.182395363726291 0.185266012386245 0.187409994783426 0.186786606124925 0.184275022503926 0.182401115389404 0.186961875050943 5 5|0 -|/ 3436465 3437333 3436916.4 3436414 3439222 - gene protein_coding_gene TRUE TRUE AT5G10900.1 calcineurin-like phosphoesterase family protein similar to PP7 (protein phosphatase 7), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G63870.1); similar to Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase [Medicago truncatula] (GB:ABE88824.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.045808378917019 0.520353363203235 0.613531006417202 1 0.180961855663325 4.54868723681098 0.045808378917019 0.0620352989372019 AT5G18650_at 8.77239582908047 9.16592443584377 9.46714391646472 9.41061300712302 10.4977105554360 10.0528471835441 9.10011534596727 8.89670294284935 9.58343330512428 9.31345462200719 10.3419793644995 10.3021531595604 10.2097075194095 10.1493047197296 10.0964548292879 10.4474593295973 9.71126713952175 9.8960990361379 9.61244608093984 0.149340080110774 0.14092830835727 0.147424804607760 0.147931525176974 0.148683880997061 0.155225009552571 0.139045375255022 0.141703024446382 0.159338528596065 0.143132873315217 0.147136873751518 0.141323479853873 0.141628131304240 0.151635946828011 0.142020971131064 0.141610091763227 0.154189531220514 0.144946287104254 0.141270755940835 5 0|5 /|+ 6219438 6220335 6219860.75 6217914 6220704 + gene protein_coding_gene TRUE TRUE AT5G18650.1 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G62970.1); similar to Os12g0538500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066941.1); similar to CHY zinc finger family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93958.1); similar to Zinc finger, RING-type; Zinc finger, CHY-type [Medicago truncatula] (GB:ABE83637.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.0539608105310585 0.519394212583893 0.614176887520691 1 0.180467977863040 19.2441388886595 0.0539608105310585 0.109084926474325 AT5G63850_at 7.72596835214764 8.8342873748422 9.4485091020246 9.55713954337462 9.9256601452043 9.52744372762749 9.66220408674513 9.85754529007664 9.28516689461271 9.46136269658887 10.5309890163677 10.1095739076462 10.1528741341251 9.9087016668561 9.6995135111527 10.3917069277983 9.43127729378983 10.3637888441961 9.4442225938559 0.19246270287819 0.164345799838972 0.168879633539988 0.161052441011008 0.161139858725967 0.164383477845286 0.159435793367945 0.160301505115477 0.170872700432939 0.160717487697180 0.158880143517553 0.157163816563569 0.162717763634750 0.166894350054304 0.165212247303859 0.159119994915492 0.193874324981156 0.163665207863988 0.163503523941186 5 5 + 25570033 25570536 25570258.909 25568281 25570746 + gene protein_coding_gene TRUE TRUE AT5G63850.1 AAP4 (amino acid permease 4); amino acid permease Amino acid transporter whose expression is downregulated by dehydration. similar to AAP3 (amino acid permease 3), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G77380.1); similar to AAP5 (amino acid permease 5), amino acid permease [Arabidopsis thaliana] (TAIR:AT1G44100.1); similar to AAP2 (AMINO ACID PERMEASE 2), amino acid permease [Arabidopsis thaliana] (TAIR:AT5G09220.1); similar to amino acid transporter [Lycopersicon esculentum] (GB:AAO13689.1); similar to amino acid permease [Brassica napus] (GB:CAF22024.1); similar to amino acid carrier [Ricinus communis] (GB:CAA07563.1); contains InterPro domain Amino acid/polyamine transporter II; (InterPro:IPR002422); contains InterPro domain Amino acid transporter, transmembrane; (InterPro:IPR013057) -0.0776855081237642 -0.517179835586521 0.615669335052913 1 0.179331064664251 19.0525799816357 -0.0776855081237642 0.207442389672675 AT5G51510_at 7.31513221174451 8.04964871291469 8.58956813691616 8.53000909689563 8.82795894570006 8.61524705362558 6.9635524991481 7.31662135106936 6.55853515866944 6.1939565793568 7.52113479274402 7.30357727190504 7.57631373267582 6.79464657407038 7.23036088811541 7.32157052432614 7.14492220827321 7.3329250865665 6.4553257799068 0.224482772850892 0.222533774217293 0.236082010720783 0.230550998683605 0.228521025225988 0.230385831841524 0.231983012726162 0.222533774217293 0.246013975619244 0.228343221459447 0.225535461431767 0.224818920145196 0.231204555073059 0.239583236726675 0.230670629584696 0.226898798452324 0.244557926755399 0.229096507319101 0.224405433449217 5 5 + 20938766 20940019 20939316.364 20938659 20940204 + gene protein_coding_gene TRUE TRUE AT5G51510.1 similar to Os10g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065024.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM94931.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54551.2) 0.0619826979072509 0.5171175858878 0.615711316561074 1 0.179299170682655 14.8663608630745 0.0619826979072509 0.146122682554986 AT5G08520_at 9.21380581504754 9.3216127420299 9.40704602927878 9.4455745177006 9.99687296201765 9.79340208909164 8.28194822017339 8.57735382337061 8.73983802620852 8.44321538286608 9.56200203972462 9.48092613550332 9.13873447919183 9.37165737746124 9.50001362731458 9.28986386024984 9.25446107153917 9.03449825687019 8.38843022781493 0.127647267947719 0.127118587679167 0.127578188556676 0.129117662829092 0.132567053001671 0.133379784298378 0.128167883410883 0.125521843873582 0.155488675800992 0.138001675043555 0.126580990261077 0.126781245764607 0.134873858990722 0.134817832670505 0.123696174097558 0.125040416814653 0.137239403307573 0.131109303815774 0.145112098720012 5 0|5 /|- 2755471 2755922 2755648.2 2755176 2758363 - gene protein_coding_gene TRUE TRUE AT5G08520.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G23650.1); similar to H0101F08.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86209.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0459312250479023 0.51676418855116 0.615949676832624 1 0.179118174499583 18.1811257673113 0.0459312250479023 0.0651595380112204 AT5G01710_at 8.28281321285472 8.29149992697275 9.13531058714947 9.09817867243 9.1588382116909 9.16950917521343 7.81496256670485 8.01787694200855 8.71059316890684 8.4089878361195 9.42182095266844 9.25812994998704 9.04958292108139 9.35362934796523 9.05257169821501 9.43754035146213 8.97816456693329 9.28813462181567 8.5912873755183 0.0957836980099091 0.0934762576420714 0.094203010128845 0.0971386338045115 0.0954614458418187 0.0977839522643351 0.104151149421932 0.0958453291092955 0.100189496692255 0.0970786098818723 0.090044615628872 0.0926269564282538 0.0928604265162796 0.0914603507093634 0.0936092771310149 0.0905887157059799 0.0959263016664259 0.0921249262502606 0.0968260727946714 5 5 - 263713 264197 263952.909 263516 265613 - gene protein_coding_gene TRUE TRUE AT5G01710.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24805.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC75560.1); contains InterPro domain Methyltransferase FkbM; (InterPro:IPR006342) 0.0424476138051397 0.515553007747601 0.616766949391289 1 0.178498744727651 17.5212417926019 0.0424476138051397 0.0357777077756614 AT5G48450_at 2.11771786483065 2.26903269834219 2.04723353342577 2.05291275086289 2.00779554754225 1.79046619969442 1.83494532737916 2.12484997260113 2.92966567025720 2.77673930176017 3.81516732317645 4.15394190799932 3.12551819158744 3.73983086977966 4.69610875164351 3.04761706814087 2.71079403996568 3.2757805489605 2.56609364905253 0.174521699550070 0.175388788759345 0.183396670560907 0.184261428348263 0.175385663961376 0.175876425604900 0.178042082530772 0.179404712819577 0.186070062253521 0.178828048220442 0.184836695386092 0.184928953896281 0.174976671151268 0.180915303855168 0.172189780720424 0.173566115966411 0.184277474053245 0.181320491526430 0.172189780720424 5 5|0 -|/ 19650531 19651247 19650877.6 19650521 19652890 - gene protein_coding_gene TRUE TRUE AT5G48450.1 SKS3 (SKU5 Similar 3); copper ion binding similar to SKS1 (SKU5 SIMILAR 1), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G25240.1); similar to SKU5 (skewed 5), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G12420.1); similar to SKS2 (SKU5 SIMILAR 2), copper ion binding [Arabidopsis thaliana] (TAIR:AT5G51480.1); similar to C-terminal peptide-binding protein 1 [Zea mays] (GB:BAE95064.1); similar to Os01g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041735.1); similar to putative pectinesterase [Oryza sativa (japonica cultivar-group)] (GB:BAC55686.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.046207586473153 0.515302812345879 0.616935842540522 1 0.178370959823805 5.19466642584146 0.046207586473153 0.0679567797457139 AT5G59830_at 6.23815036593936 6.7418689968116 7.26077049908883 7.09360294722149 7.7274962629074 7.58057646629337 6.02735931077446 6.13896006935141 5.67731068418027 6.33202761227792 6.94010297312121 7.08187429603867 7.04659874824015 6.72468803901549 7.06778224833053 7.49971484331636 7.10963236214056 6.89428233996926 6.56388613221745 0.195411742746383 0.183923587922746 0.198636079172085 0.183923587922746 0.194448239782148 0.205184163337140 0.191130206195638 0.189986351859448 0.207776716929054 0.198095570643133 0.200646492850691 0.183923587922746 0.1845411405906 0.199394950297416 0.200062524491039 0.187448445854532 0.195112967194079 0.189540967231064 0.189275019866938 5 5|0 +|/ 24123497 24124243 24123832 24122304 24124459 + gene protein_coding_gene TRUE TRUE AT5G59830.1|AT5G59830.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13660.1); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14274.1) -0.0511599152651827 -0.514972646729871 0.61715875476611 1 0.178202420854841 13.4694277602135 -0.0511599152651827 0.0972372589999962 AT5G14620_at 3.51885544330863 3.84803416774065 3.99986104457936 4.46794641371496 4.63353720057801 4.76924266748668 3.49276445054754 3.6179640249471 3.14488443708356 3.21722555393026 3.69466401596917 3.69527864206598 3.63167095860586 3.51702509969487 3.91951782714363 3.68047768074249 3.92448658350365 3.46140294064651 3.47973896978772 0.151180428026974 0.148376062933811 0.151011399862179 0.149620357572329 0.151055760609019 0.154256924209665 0.150140030178813 0.153475212868300 0.158052023829086 0.150669491090051 0.149021432378669 0.151867733305866 0.149407273909977 0.151026801795372 0.149784753394158 0.147649930732371 0.152898521290657 0.151905188278486 0.150190839866049 5 0|5 /|- 4715465 4718357 4716815.65 4715256 4718707 - gene protein_coding_gene TRUE TRUE AT5G14620.1 DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2) A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. similar to DRM1 (DOMAINS REARRANGED METHYLASE 1) [Arabidopsis thaliana] (TAIR:AT5G15380.1); similar to DNA methyltransferase [Nicotiana tabacum] (GB:BAC67060.1); contains InterPro domain UBA-like; (InterPro:IPR009060); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) -0.0523867241856242 -0.513982168727702 0.617827721475596 1 0.177697427752762 7.52911657101971 -0.0523867241856242 0.104056583976688 AT5G63140_at 1.48026086993432 1.74512592592251 1.11887992419133 1.35913246907316 1.04088548627324 1.41456950344947 1.12132413437668 0.774593799442122 1.45695398080839 1.08748531750779 1.55449408221217 1.9731592756698 1.38586794657556 1.52998446159193 2.10812659386514 1.59200625561118 1.19091245555605 1.38914606197019 1.22987750015368 0.181215231377548 0.177688285423776 0.178335954225874 0.182304864427907 0.179988561919520 0.182165123210810 0.173174045572042 0.173174045572042 0.184520917181412 0.178210122120722 0.175502227965439 0.177667333564760 0.176574779759549 0.180505426201952 0.179052897014532 0.177166518802677 0.179545843615528 0.182148963859207 0.188934970213031 5 5 + 25346199 25346774 25346434 25345345 25347025 + gene protein_coding_gene TRUE TRUE AT5G63140.1 ATPAP29/PAP29 (purple acid phosphatase 29); acid phosphatase/ protein serine/threonine phosphatase similar to ATPAP14/PAP14, acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G46880.1); similar to putative PTS protein [Cicer arietinum] (GB:CAB76911.1); contains InterPro domain Phosphoesterase At2g46880; (InterPro:IPR011230); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.0530978133345416 0.513681466385991 0.618030887193997 1 0.177544297636606 2.68113038464358 0.0530978133345416 0.107758521634941 AT5G56600_at 9.42405165767543 9.59068709857727 10.3305017227754 10.5020805039943 10.2816873474007 10.2349406510347 10.2998845312006 10.442476337984 9.45549233112838 10.0413353267643 10.6181381869245 10.4539298048539 10.5674083657252 10.6749604342674 10.6397689498431 10.7625877622534 10.8932850084993 10.9563441547427 9.62083560527418 0.0838347504100322 0.0833626345250407 0.0842479065395146 0.0802188103537143 0.0808759027520576 0.0817652679695064 0.0803144833165063 0.078986422013911 0.0904656636026336 0.0809010291483304 0.0786029773537998 0.0786029773537998 0.0786029773537998 0.0808382077984522 0.0790445293267917 0.0797087006016586 0.081284656500582 0.0810292550636785 0.0864152845576307 5 5 - 22927108 22927907 22927471.091 22926911 22928047 - gene protein_coding_gene TRUE TRUE AT5G56600.1 PFN3/PRF3 (PROFILIN 3); actin binding Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs. Identical to Profilin-5 (PRO5) [Arabidopsis Thaliana] (GB:Q9FE63); similar to PFN1/PRF1 (PROFILIN 1), actin binding [Arabidopsis thaliana] (TAIR:AT2G19760.1); similar to profilin [Citrullus lanatus] (GB:AAU43733.1); contains InterPro domain Plant profilin; (InterPro:IPR005455); contains InterPro domain Profilin/allergen; (InterPro:IPR002097) 0.0435441351945625 0.513257968028379 0.618317075317019 1 0.177328778746603 20.3391340252191 0.0435441351945625 0.0488628432528265 AT5G39580_at 0.416225083461461 0.788403468163434 1.23875481508067 0.523094223410702 0.186867592479768 0.552158326209883 0.302750134619830 0.590230046102472 0.727221564518418 0.0385568703421424 0.942466134136595 0.552630912847079 0.249477653546648 0.388625307507363 0.313722689135955 0.531913879407236 0.172704140762045 0.177107498260558 0.8834740653424 0.209843984272823 0.214197194642498 0.218446793353280 0.213106679517672 0.21091633048588 0.216811536060419 0.208225011148398 0.209795482441946 0.211106352736514 0.214487206472937 0.216203729692037 0.212141764028417 0.209435314488935 0.209611316939372 0.21844410526748 0.209157086489345 0.223509155721320 0.208889435950759 0.215721193492063 5 0|5 /|- 15864594 15865333 15864883.111 15864306 15866336 - gene protein_coding_gene TRUE TRUE AT5G39580.1|AT5G39580.2 peroxidase, putative|peroxidase Identical to Peroxidase 62 precursor (EC 1.11.1.7) (Atperox P62) (ATP24a) (PER62) [Arabidopsis Thaliana] (GB:Q9FKA4;GB:P93724); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64120.1); similar to bacterial-induced peroxidase [Gossypium hirsutum] (GB:AAL73112.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823)|Identical to Peroxidase 62 precursor (EC 1.11.1.7) (Atperox P62) (ATP24a) (PER62) [Arabidopsis Thaliana] (GB:Q9FKA4;GB:P93724); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64120.1); similar to Cationic peroxidase 2 precursor (PNPC2) (GB:P22196); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.0651108093439882 -0.513014995706615 0.618481299085164 1 0.177205205869371 1.05772639136674 -0.0651108093439882 0.16111462178793 AT5G26150_at 1.20167561007466 1.08488331726610 0.97482180259974 1.74589507192494 1.03169610858868 1.09609949416689 0.947201252555992 1.04777907364211 1.63151006965008 1.43132220191965 1.63636597313083 1.42451452614361 1.63605761657773 0.893849718267803 1.75831801672268 1.06086806395063 1.26340283200567 1.22191391733381 1.29854909437364 0.259729809238682 0.256318521355010 0.267529707039996 0.262718906730103 0.260639309011106 0.255636200674957 0.256590540991826 0.25364531231113 0.256392373862649 0.257424589617420 0.256216545593061 0.253058445674379 0.255805285275588 0.252881727421029 0.255344220304739 0.252881727421029 0.266057449121669 0.264083348596383 0.269840074938317 5 5 - 9137518 9138039 9137833.455 9137464 9140102 - gene protein_coding_gene TRUE TRUE AT5G26150.1 protein kinase family protein similar to kinase [Arabidopsis thaliana] (TAIR:AT5G12000.1); similar to kinase [Arabidopsis thaliana] (TAIR:AT2G24370.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G31230.1); similar to serine threonine kinase [Zea mays] (GB:AAL59227.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79207.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE79205.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.059243456013587 -0.512893069454782 0.618563716663028 1 0.177143216506656 2.54910902718458 -0.059243456013587 0.136533233760485 AT5G47470_at 1.10996576676367 1.43894438254627 1.33591984443216 2.23705667200694 1.26210328455194 1.33031393596723 1.09401060642872 1.51349507722351 1.47260341410642 1.54841416100050 1.04356286452383 1.3351767783787 1.3262526272705 1.27457919381130 1.08145559522329 1.27412512493159 1.08467463751612 1.45890827384399 1.30440400113974 0.206209010831784 0.202170652252758 0.200684758630124 0.206052388046971 0.203537767157503 0.203622018067834 0.202442357845169 0.201903398206839 0.203744176524538 0.203915342659967 0.200373934404697 0.201537887472835 0.202264150367763 0.202197743295887 0.205024839749271 0.202809814206224 0.204747406497047 0.200373934404697 0.207436972993435 5 5|0 +|/ 19272609 19273573 19272999.444 19271825 19273605 + gene protein_coding_gene TRUE TRUE AT5G47470.1 nodulin MtN21 family protein similar to integral membrane family protein / nodulin MtN21-related [Arabidopsis thaliana] (TAIR:AT4G16620.1); similar to integral membrane protein, putative [Brassica oleracea] (GB:ABD64979.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) -0.0701747515254056 -0.512363315737697 0.618921874229549 1 0.176874042980918 2.75355073574987 -0.0701747515254056 0.181575038274541 AT5G20920_at 9.9408383324838 10.1119231186156 10.6271939374646 10.5814196656158 10.7921114230342 10.5671288211213 10.0706840927275 10.1123939325081 9.74173063380249 9.73433793191977 10.6492808634633 10.6260021818187 10.7385652389991 10.3228893700884 10.4969326800857 10.5076749054315 10.3940284161349 10.4356815473350 9.70931650762005 0.100110275629478 0.097123081178416 0.103547134877552 0.0991919769094705 0.0981836972006987 0.10931118039562 0.100995430688073 0.0983700127534646 0.107005718750865 0.109335493787162 0.103445643656007 0.0990728451775781 0.0981974535040953 0.106946410422275 0.100867236212237 0.0994662228572262 0.105194612736718 0.102186668621014 0.106187093848299 5 5|0 -|/ 7095007 7095925 7095481.9 7094720 7097118 - gene protein_coding_gene TRUE TRUE AT5G20920.1|AT5G20920.2|AT5G20920.3 EIF2 BETA (EMBRYO DEFECTIVE 1401) protein synthesis initiation factor eIF2 beta Identical to Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) [Arabidopsis Thaliana] (GB:Q41969;GB:Q8L7Q3;GB:Q9C5N7); similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G07920.1); similar to Translation initiation factor IF5 [Medicago truncatula] (GB:ABE94142.1); contains InterPro domain MscS mechanosensitive ion channel, C-terminal; (InterPro:IPR011066); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735)|Identical to Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) [Arabidopsis Thaliana] (GB:Q41969;GB:Q8L7Q3;GB:Q9C5N7); similar to translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G07920.1); similar to eukaryotic translation initiation factor 2 beta subunit-like [Solanum tuberosum] (GB:ABB86256.1); contains InterPro domain Translation initiation factor IF5; (InterPro:IPR002735) 0.0434989535571242 0.511120847955606 0.619762293017077 1 0.176243766548981 20.4753834612132 0.0434989535571242 0.0500729923963956 AT5G42700_at 0.567614542159427 1.09157234605712 0.726662533934282 1.09227700194331 0.655340542593923 1.36208441709577 0.658642225885316 0.947573420421628 0.618478728044445 1.23495914868634 0.423566960487549 0.920972364202068 1.1490243691906 0.717105961662126 1.22090650405068 0.96896517946896 0.648714335229196 1.11686913543664 1.29398498881503 0.233690294253972 0.240293723782418 0.242130240256344 0.249795888552761 0.238694118873580 0.252249982570777 0.239065738261341 0.230020778088729 0.242820832129386 0.243168934511141 0.229737257573261 0.229737257573261 0.240525777528848 0.235162418260229 0.245916920752940 0.237877554061 0.238875613727605 0.268186302407337 0.246317194662753 5 5|0 +|/ 17139479 17140084 17139762 17139399 17141581 + gene protein_coding_gene TRUE TRUE AT5G42700.1 transcriptional factor B3 family protein similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G19184.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81380.1); similar to Os03g0184500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049190.1); similar to Os06g0194400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057046.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.0675297716497598 -0.510234831103176 0.620361952884637 1 0.175795196242563 1.86017415696030 -0.0675297716497598 0.172289268747845 AT5G12190_at 8.29545862138727 8.26956785762609 8.76827730989011 8.84484188415215 8.94537981134024 8.63471425859229 6.89726693529959 7.67255463314158 6.69929244351791 6.48962873655778 7.4240446574519 7.66268467173116 7.79984310116108 7.65448422401233 7.33030889641442 7.62198686228712 7.92259711830919 7.32602831804472 6.51484875857086 0.227295450455962 0.216767243087918 0.230749632302504 0.219144589056233 0.213011982234984 0.227694683500923 0.218645473564832 0.221919382462115 0.23263266339937 0.22038837079446 0.215347372435137 0.210411617960487 0.210411617960487 0.210411617960487 0.216861848851964 0.215968174679959 0.215901049579409 0.225210133972043 0.215924039175106 5 5 - 3940812 3941064 3940925.182 3940533 3941206 - gene protein_coding_gene TRUE TRUE AT5G12190.1 RNA recognition motif (RRM)-containing protein Identical to Pre-mRNA branch site p14-like protein [Arabidopsis Thaliana] (GB:Q9FMP4); similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G14870.1); similar to RNA-binding re (GB:ABE77687.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.0608190507588691 0.50918785030497 0.621070927161225 1 0.175266085128317 15.371342935958 0.0608190507588691 0.145213030528535 AT5G04910_at 6.33612449681025 6.39255026222111 7.35429019484072 7.46873412830867 7.95622134113967 7.80980139058259 5.39729530174828 5.65003173786824 5.75598814647607 5.80649301849302 6.50004103497304 5.81635605240513 6.17106778627357 6.39335900275359 6.32436471212572 6.64637402103381 6.59815707019296 6.35422092995755 6.05764985912241 0.19167619316982 0.199146157800271 0.193799132855588 0.194744372896925 0.199094934276012 0.197791222322358 0.216256846416693 0.209858923149243 0.213534376235113 0.201655167041587 0.197626066912353 0.194149654418189 0.199023305389105 0.196505191990316 0.200363120200983 0.191726059134389 0.203400102390489 0.204992438988012 0.199291798915773 5 5|0 +|/ 1437787 1438745 1438195 1437696 1438771 + gene protein_coding_gene TRUE TRUE AT5G04910.1 similar to REX1-B [Chlamydomonas reinhardtii] (GB:AAP12521.1); similar to Os01g0265700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042671.1) 0.0438985765560411 0.508758401295873 0.621361850009332 1 0.175049353331814 12.9075658988124 0.0438985765560411 0.0551596067957767 AT5G24400_at 7.86644256935298 8.01691557872366 8.82063766597578 8.77254520712112 8.94745357985435 8.69683799520417 7.85096709868966 7.89860415861076 7.70460923511816 7.85143040061619 8.65544993626085 8.7991968103716 8.437668807731 8.48387538350626 8.66440782518417 8.55681853441136 8.4510252873804 8.68964297501424 7.95722644146855 0.139704998039508 0.132560008380487 0.135170371465761 0.135432354319077 0.134610455489175 0.137374704294079 0.137567359793059 0.140029556993910 0.139297745271973 0.141656156652229 0.132417056301920 0.131810745117465 0.133552748191423 0.130203544744137 0.136155928523171 0.131261509809243 0.143276899848857 0.142518841041358 0.137151119835332 5 5|0 -|/ 8330558 8331131 8330781.7 8330318 8331840 - gene protein_coding_gene TRUE TRUE AT5G24400.1 EMB2024 (EMBRYO DEFECTIVE 2024); catalytic similar to glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G49360.1); similar to putative 6-phosphogluconolactonase [Elaeis guineensis] (GB:AAO26315.1); contains InterPro domain 6-phosphogluconolactonase; (InterPro:IPR005900); contains InterPro domain Glucosamine/galactosamine-6-phosphate isomerase; (InterPro:IPR006148) -0.0434854113980565 -0.508460196760053 0.621563903501781 1 0.174898959295368 16.5738085087166 -0.0434854113980565 0.0519257639867954 AT5G57360_at 7.20932996612832 7.4890279983269 7.67484430085227 8.25487900753125 8.60952257125172 8.33268855715255 7.17013299508598 7.746463295108 7.31587406251944 6.70905183782912 7.95025736192242 7.77810999957984 8.3554746705804 8.2611232379974 7.54791446666198 8.1561535578502 8.26212247888715 8.09277658253872 7.19747761835486 0.146161826656752 0.145606545599685 0.149747819101299 0.146580150164103 0.144524559141477 0.142349963155269 0.145449419211662 0.144300498423695 0.142642441612758 0.164699137226509 0.142117628128479 0.150965883931512 0.142117628128479 0.148027301138226 0.149318368372152 0.144183465816285 0.151505926336976 0.146184544104399 0.149849598573843 5 5 + 23260910 23261350 23261109.636 23258653 23261816 + gene protein_coding_gene TRUE TRUE AT5G57360.1 ZTL (ZEITLUPE); ubiquitin-protein ligase Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. Identical to Adagio protein 1 (Protein ZEITLUPE) (LOV kelch protein 1) (Flavin- binding kelch repeat F-box protein 1-like protein 2) (FKF1-like protein 2) (F-box only protein 2b) (FBX2b) (Clock-associated PAS protein ZTL) (ADO1) [Arabidopsis Thaliana] (GB:Q94BT6;GB:Q9LDF6); similar to LKP2 (LOV KELCH PROTEIN 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G18915.2); similar to FKF1 (FLAVIN-BINDING KELCH DOMAIN F BOX PROTEIN), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G68050.1); similar to ZTL [Ipomoea nil] (GB:ABC25060.2); similar to ZEITLUPE [Mesembryanthemum crystallinum] (GB:AAQ73527.1); similar to Cyclin-like F-box; Galactose oxidase, central [Medicago truncatula] (GB:ABE90708.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain PAS; (InterPro:IPR000014); contains InterPro domain Kelch; (InterPro:IPR011498); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.0634791739564053 -0.507948849155157 0.621910451846156 1 0.174641265180360 15.373174111798 -0.0634791739564053 0.157038400682273 AT5G27980_at 1.02095271400698 0.8607496791672 1.14052858839691 0.8222966140091 1.07657047832803 1.28566749080419 1.43032895034138 0.646025272821013 1.64187504722217 1.20329309858371 1.53002603496498 1.17851797243758 1.31960702243252 1.42227111577899 1.24396885365316 1.67004200368647 1.94096503289144 1.70233573336211 1.07768121753757 0.198744158800253 0.193754966925118 0.194372341443312 0.200721660496631 0.203479019353043 0.200439601836687 0.193754966925118 0.193754966925118 0.198028149279364 0.199911765278989 0.200500448085401 0.199298275502718 0.200521383774512 0.193754966925118 0.196043835686215 0.208550449315189 0.213903921110912 0.198608028249628 0.196322900547081 5 5 - 10015889 10016549 10016197.091 10015778 10016730 - gene protein_coding_gene TRUE TRUE AT5G27980.1 seed maturation family protein similar to late embryogenesis abundant protein, putative / LEA protein, putative [Arabidopsis thaliana] (TAIR:AT3G22490.1); similar to Late embryogenesis abundant protein D-34 (LEA D-34) (GB:P09444); contains InterPro domain Seed maturation protein; (InterPro:IPR007011) 0.0625062716319695 0.507136900281805 0.622460920013627 1 0.174232588339463 2.43968156128371 0.0625062716319695 0.153403996194232 AT5G58390_at 2.27206156280151 2.53260076464617 1.46132216264763 1.31550484033246 1.63435207393094 1.8688238040943 1.18813123775249 1.20743087701735 1.59405515021784 2.20226861149318 2.57153830396085 3.07305106585469 3.23603409078426 2.80107783526521 2.60736587198322 2.20412208347522 2.16864578046910 3.18290952083321 2.87756503256996 0.207485485034947 0.218982568674491 0.211186907494817 0.217153051828612 0.213293536917367 0.221960522014724 0.216965407207587 0.212640085997432 0.221345882207904 0.210309174642708 0.211418276746731 0.205358213303868 0.218887216667735 0.214055362327028 0.212935252068649 0.206137631888301 0.213802971787248 0.20801123614938 0.211980944113061 5 5 - 23616981 23617481 23617199.091 23616793 23618551 - gene protein_coding_gene TRUE TRUE AT5G58390.1 peroxidase, putative Identical to Peroxidase 67 precursor (EC 1.11.1.7) (Atperox P67) (ATP44) (PER67) [Arabidopsis Thaliana] (GB:Q9LVL2); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58400.1); similar to peroxidase precursor [Quercus suber] (GB:AAR31108.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.0450033035522036 -0.505339922316765 0.623680058655627 1 0.173330325168763 4.1626397489888 -0.0450033035522036 0.0657819078218422 AT5G53470_at 7.10085584063865 6.97646053150622 7.48497270203016 7.75096338418072 8.06382710822422 7.83479175809647 6.90823833802495 7.17302150814073 6.59527117736599 6.09621762007549 7.90934297807279 7.75337169765927 7.68142066454242 7.74415134993904 7.51358004708294 7.57581767315805 7.82490338647635 7.39037499811074 6.17483635274069 0.160776354854904 0.154020657719345 0.159822484872288 0.156216207739073 0.170028992619460 0.156391041120309 0.171012159834767 0.165165513438081 0.171794403518159 0.162686482324997 0.15438073899442 0.154020657719345 0.160594838723671 0.155678805828769 0.160966315130451 0.154020657719345 0.175894035417778 0.159339293195806 0.167762231727257 5 5|0 +|/ 21728584 21729539 21729045.8 21727577 21729836 + gene protein_coding_gene TRUE TRUE AT5G53470.1 ACBP1 (ACYL-COA BINDING PROTEIN) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower. similar to ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2) [Arabidopsis thaliana] (TAIR:AT4G27780.1); similar to membrane acyl-CoA binding protein [Agave americana] (GB:AAT81164.1); contains InterPro domain Acyl-coA-binding protein, ACBP; (InterPro:IPR000582); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.0469891390350516 0.504971926630479 0.623929867136934 1 0.173145929538599 14.3930890960757 0.0469891390350516 0.0790752934175325 AT5G55260_at 6.06659894847282 6.06337221460816 6.99881779572893 6.98956417727545 7.54294720070467 6.83676731905288 7.02103183427232 6.46796093916603 5.94059506811835 6.1715306584621 7.54989411698005 7.9410458858711 7.75616573552446 7.76459118914513 7.56725482455131 7.74995248379099 7.80810560081823 7.06399931539931 6.28224111279628 0.182549097382294 0.186654342668781 0.188519386131010 0.189016505863413 0.192661453417680 0.197451760512689 0.182549097382294 0.182549097382294 0.2000801017808 0.192952692752969 0.182604744607791 0.185832556103156 0.184168466697132 0.191842104464454 0.189036486465532 0.184424947203563 0.184153461689575 0.186408878013473 0.189410089637948 5 5|0 +|/ 22434839 22435822 22435449.5 22433825 22436090 + gene protein_coding_gene TRUE TRUE AT5G55260.1 PPX2 (protein phosphatase x-2); protein serine/threonine phosphatase Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase. Identical to Serine/threonine-protein phosphatase PP-X isozyme 2 (EC 3.1.3.16) (PPX2) [Arabidopsis Thaliana] (GB:P48528;GB:O22626); similar to PPX1 (protein phosphatase x-1), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G26720.1); similar to Os09g0284200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062774.1); similar to protein phosphatase 4 catalytic subunit [Dictyostelium discoideum AX4] (GB:XP_645186.1); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) 0.0626579161142007 0.504827484075985 0.624027933410627 1 0.173073586983655 13.6391734322280 0.0626579161142007 0.155236253396933 AT5G22920_at 10.4607888819268 10.3779169227014 10.6341731817794 10.5474803496847 11.7084400012352 11.3179266623376 10.2732574661413 10.1534355382344 10.0807127776978 9.98136910915785 10.761158944959 10.8578917212657 10.6436568062443 10.6426028602917 10.7523192657712 10.5195266160559 10.5624410660906 10.7019484471513 10.1963950918585 0.0746519362825257 0.0748899962955543 0.0779012674419313 0.0754086797593092 0.077364132157595 0.0838098391848686 0.0751900990300292 0.0765902018754188 0.0874267809733357 0.0769870732483044 0.0774405149532999 0.0744923363748491 0.0747665182221836 0.0783436747645008 0.0763679377238759 0.0744923363748491 0.0821348417558041 0.0769174008385585 0.0765966309002965 5 0|5 /|+ 7666275 7666995 7666742 7664994 7667268 + gene protein_coding_gene TRUE TRUE AT5G22920.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G25560.1); similar to PGPD14 [Petunia x hybrida] (GB:AAD02556.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.0459426334017667 0.502866148532815 0.625360297329751 1 0.172093217978529 21.0673534799468 0.0459426334017667 0.07367361451742 AT5G39220_at 1.48669403039668 1.77999120276543 1.57757476795015 1.61839537879958 1.32710386641156 1.86977628459806 1.08236511387971 1.22353639778519 1.80181328287601 1.52546518894186 1.35366547272863 1.55583602274495 1.78381156090360 1.35404546215437 2.15140782641143 1.98677999267112 1.55785292755628 2.11728569220619 2.08819797570781 0.251084943292212 0.263278163241396 0.257626368269553 0.255922230645567 0.252267280757659 0.275410410184733 0.257415095416548 0.268460880166073 0.256743403384546 0.260711651947064 0.256406208902583 0.257284146650875 0.251084943292212 0.253844189636722 0.258722835064545 0.258120182682218 0.25840620538407 0.251084943292212 0.261288268701222 5 5|0 +|/ 15724331 15725187 15724768.778 15723044 15725456 + gene protein_coding_gene TRUE TRUE AT5G39220.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G13820.1); similar to At1g13820 [Medicago truncatula] (GB:ABE90941.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase; (InterPro:IPR000639); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.0523468335693378 -0.502602814002608 0.625539291428017 1 0.171961866857056 3.26455184808028 -0.0523468335693378 0.109737977964482 AT5G19750_at 6.3268777264999 6.1687855726592 6.85391028648758 6.49057153378165 5.80350024855785 5.76842492539304 5.35277342356608 4.37387127076926 4.47216403396307 3.63980680592371 4.16049591566515 5.88051975995387 4.22462882573941 4.96514231543147 5.36077962704626 4.71002878038049 5.13217989406307 5.06421616134666 3.45986942491826 0.252919109603361 0.255076149913053 0.256213664129552 0.252618073485703 0.26195541501928 0.252405384088345 0.251899690822879 0.255589529715184 0.260479341184544 0.250618744863677 0.253767823148935 0.250618744863677 0.255624737971088 0.265009090281058 0.257714624936603 0.250618744863677 0.264429831776083 0.250618744863677 0.250618744863677 5 0|5 /|+ 6677692 6678335 6678002.625 6677071 6679386 + gene protein_coding_gene TRUE TRUE AT5G19750.1 peroxisomal membrane 22 kDa family protein similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT2G14860.1); similar to Mpv17/PMP22 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91342.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) -0.0690855814711508 -0.502054094994217 0.625912348804114 1 0.171688376122178 10.2896038725751 -0.0690855814711508 0.182856462917201 AT5G07380_at 1.75759743559890 1.96622487111863 2.42115997603252 2.17568098412107 2.08360239916554 2.27857415903537 1.31118231496793 1.72732910922309 1.70811051077881 1.96339518374365 1.71327382198170 1.65298749806502 1.99341319010692 1.89092586607528 1.46825682872496 1.83739769827287 1.80884879973154 1.97997036430746 2.12254565949756 0.197532135872499 0.19285874809865 0.188863178306684 0.190909212683371 0.201721091247116 0.187556988481118 0.197784041283125 0.195106353007375 0.201209923574036 0.20448061776101 0.196760288009251 0.200558163953379 0.196138313318981 0.187313592909120 0.195878962397922 0.188040959003611 0.188145734223612 0.190071163204858 0.195600459500585 5 5 + 2334946 2335620 2335306.2 2332477 2336064 + gene protein_coding_gene TRUE TRUE AT5G07380.1|AT5G07380.2|AT5G07380.3 similar to Cytokine, four-helical bundle [Medicago truncatula] (GB:ABE85653.1) 0.049849064336282 0.501990844880061 0.625955357698982 1 0.171656869451622 3.82741126103199 0.049849064336282 0.0971232178102984 AT5G11080_at 2.10175819373239 2.04728578647392 2.00313940521638 2.10865762904442 1.70213704025083 2.09725043438580 1.70480937030264 2.12793122978271 2.02858732891757 1.71048000273606 1.92549226427040 2.15697827073317 1.85697874676313 2.11048649502923 2.09604661515734 1.80025483670935 2.65202871620522 2.31373539301562 1.85324834175271 0.218773364949942 0.215679159005315 0.219742858337089 0.218593296087306 0.223450929107453 0.218426322701601 0.220278258766820 0.225134637019221 0.228219148541551 0.234518733444322 0.232577646967628 0.215190598533844 0.224200556267680 0.219521346211114 0.219231709348167 0.217639707603549 0.230459205839852 0.217142100043349 0.217096181607388 5 5|0 -|/ 3517450 3518401 3518003.444 3517450 3519450 - gene protein_coding_gene TRUE TRUE AT5G11080.1 ubiquitin family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25270.1); similar to Ubiquitin [Medicago truncatula] (GB:ABE80943.1); similar to Ubiquitin [Medicago truncatula] (GB:ABE87365.1); similar to Os07g0498800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059711.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) -0.0506357475047349 -0.500167954210301 0.627195516104644 1 0.170750457069541 3.97567383200074 -0.0506357475047349 0.102270480712091 AT5G07230_at 1.86689914594553 1.36322281041500 1.61446042077328 2.03769942992613 1.56075959508690 1.64534816214285 1.23207389372488 1.66950607377082 1.3725550962293 1.89468464041037 1.29003147417052 1.22277149702921 1.41142875586092 1.11853854559007 1.69516041273104 1.34325020599405 1.71613320474900 1.55876911789583 1.22926541582230 0.193674148718737 0.187014496877575 0.187014496877575 0.201682470730495 0.191547697332288 0.194321923384772 0.189545115405753 0.187868745909864 0.189727190538045 0.187014496877575 0.188413901566492 0.187260650748666 0.199890517263597 0.196648504562732 0.191634706627989 0.189874866600095 0.19987435923687 0.218183074089499 0.193449353216359 5 5|0 +|/ 2271076 2271210 2271145.111 2270966 2271611 + gene protein_coding_gene TRUE TRUE AT5G07230.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Identical to Tapetum-specific protein A9 precursor (A9) [Arabidopsis Thaliana] (GB:Q00762;GB:Q67ZX3;GB:Q9LYP3); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G62080.1); similar to Tapetum-specific protein A9 precursor (GB:Q05772); contains InterPro domain Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor; (InterPro:IPR003612) -0.0578219188798021 -0.498714003629194 0.628185542569842 1 0.170029743097355 3.08291891775980 -0.0578219188798021 0.137502058204978 AT5G10540_at 7.23782695683915 7.22476806611152 7.45258798452513 7.59565666588492 8.39306615424042 8.2351761526413 7.44134763892357 7.15444829788474 7.26213598146088 7.2356870706707 8.78800942239291 8.906625886047 8.58696371762453 8.34832412058784 8.56850622980186 8.18488509182849 8.156984640921 8.3820067882149 6.93344446400888 0.197862760388728 0.195377221398049 0.204258091081395 0.195985190485772 0.199170561372409 0.207954935904141 0.205607643009104 0.205101554545037 0.211081531109017 0.200963855839863 0.197996099844805 0.199260434538803 0.199387898625831 0.206017742397958 0.208156300293230 0.195718386612465 0.21104785357655 0.196734780904530 0.204942599907412 5 5|0 +|/ 3331210 3332230 3331719 3328093 3334972 + gene protein_coding_gene TRUE TRUE AT5G10540.1 peptidase M3 family protein / thimet oligopeptidase family protein similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT5G65620.1); similar to Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Medicago truncatula] (GB:ABE84181.1); similar to oligopeptidase A [Nostoc sp. PCC 7120] (GB:NP_484923.1); similar to Peptidase M3A and M3B, thimet/oligopeptidase F [Anabaena variabilis ATCC 29413] (GB:YP_324977.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567); contains InterPro domain Hpt; (InterPro:IPR008207) 0.0438422863817862 0.498246509183365 0.628504032907709 1 0.169798432905977 15.4088817775767 0.0438422863817862 0.061884809136727 AT5G07950_at 3.64392843454088 3.8877865126115 4.84961146431006 5.0989508744551 5.38082150179375 4.78803736433302 3.88893258296387 3.80669452688002 3.50499998864176 3.48317744462758 3.5731619326895 3.80410216682434 3.98091605709824 3.2917337816199 3.23320354493992 3.95718387239909 4.33493679292204 3.86153181878301 3.75294673061147 0.234981771314286 0.241790548218094 0.237220162549519 0.249365270281630 0.258864552669911 0.258338017475278 0.238422873022204 0.236355552598904 0.251045462789295 0.241128969768376 0.238282468438341 0.233947461655721 0.233078178587520 0.237829753867082 0.244579714152946 0.233078178587520 0.238199364437562 0.239183543181274 0.239624440878222 5 0|5 /|- 2540689 2541513 2541044.9 2540285 2542137 - gene protein_coding_gene TRUE TRUE AT5G07950.1 similar to Os03g0213200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049360.1); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) -0.0537675027243092 -0.496508168715669 0.629689009241286 1 0.168940134373605 8.08558089133758 -0.0537675027243092 0.119869937160973 AT5G60760_at 1.13363450441289 1.26711688867163 1.80263571130156 1.46756581141671 0.995132454279253 1.30389630341954 1.23226537753663 1.30371870924822 1.50687258496197 1.52359513689724 1.41952274189197 1.31352205663199 1.82430802950141 0.988761529208127 1.36153737979173 1.14972702122975 1.16309562514096 1.54621924873661 1.22083430109752 0.217960822774169 0.215530286820624 0.216104447738275 0.220270032602172 0.223198030469092 0.223058705947280 0.215530286820624 0.215530286820624 0.216713427971235 0.223038115729311 0.219085383766314 0.218139554469664 0.217824025192410 0.21776265988919 0.217809105359414 0.216631665897852 0.221814237820053 0.228751621852434 0.221072870382824 5 5|0 +|/ 24458478 24459193 24458851 24455497 24459513 + gene protein_coding_gene TRUE TRUE AT5G60760.1 2-phosphoglycerate kinase-related similar to 2-phosphoglycerate kinase-related [Arabidopsis thaliana] (TAIR:AT3G45090.1); similar to Os09g0572200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063996.1); similar to Os02g0819400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048534.1); similar to hypothetical protein DDBDRAFT_0203344 [Dictyostelium discoideum AX4] (GB:XP_644586.1); contains domain no description (G3D.3.40.50.300); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) -0.0467601751540537 -0.495518858790225 0.630363881988654 1 0.168452940660596 2.69471440920354 -0.0467601751540537 0.08308968384256 AT5G13580_at 0.781550501799448 0.675842689126589 1.38567070183905 1.24143463515368 1.05318356299151 1.02728368122078 1.14958785189169 0.937979211545217 1.57906236177712 1.63070343860833 0.981664865518769 0.765202296515621 1.19819967472626 1.22224185691017 1.44046001388041 1.31703127675624 1.75205641873825 1.69545010187202 1.32354404457981 0.219297977546962 0.213472692152763 0.216716302503238 0.210940198799553 0.208488022160464 0.2105573053395 0.209849839072731 0.216358632737126 0.212590232499778 0.210527355915783 0.218360860685181 0.222179788805263 0.212103542725015 0.213302706136530 0.215255392285308 0.221363155685072 0.208488022160464 0.208488022160464 0.215547588138176 5 5 + 4372467 4373012 4372716.909 4370695 4373204 + gene protein_coding_gene TRUE TRUE AT5G13580.1 ABC transporter family protein Identical to White-brown complex homolog protein 6 (WBC6) [Arabidopsis Thaliana] (GB:Q9FNB5); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT2G39350.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G55090.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G53510.1); similar to stigma/style ABC transporter [Nicotiana tabacum] (GB:AAR06252.1); similar to putative ATP-binding-cassette transporter protein [Oryza sativa (japonica cultivar-group)] (GB:AAN64479.1); similar to ABC transporter-like protein [Brassica rapa] (GB:ABB97036.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) -0.0418446344638207 -0.494119329614839 0.63131919648155 1 0.167765310242738 2.4353874018309 -0.0418446344638207 0.0481537484231988 AT5G65160_at 1.90802581609104 1.38446445140972 2.06622198763066 1.98715004438928 2.05482908094703 1.74806825671039 2.10477932104886 1.51613529028393 2.37256264210940 2.30067408323214 2.23574790105651 2.05659170612648 2.28641734455698 2.3040504957416 2.79496593234951 2.42378157254671 2.28050110990681 2.76009795183178 2.43280060015528 0.211452652864197 0.212670535834350 0.225868874671241 0.223318352413481 0.219387976909798 0.216505424322252 0.223820948179333 0.220414823787762 0.214475641255967 0.217077752059190 0.212963191552101 0.220523741538714 0.215775617965039 0.211491098595364 0.217000477000093 0.211452652864197 0.219502147021508 0.215505269655746 0.219288961181689 5 5 - 26048934 26049544 26049151.091 26048410 26051115 - gene protein_coding_gene TRUE TRUE AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G10090.1); similar to 52O08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67569.1); similar to 4D11_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67524.1); similar to 80A08_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67592.1); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain Tetratricopeptide TPR_1; (InterPro:IPR001440); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0592781236252562 -0.493000559545193 0.63208337419844 1 0.167216956337738 4.22693346119561 -0.0592781236252562 0.146940925274831 AT5G15110_at 1.25526803101805 1.43862490730407 1.64886322205632 1.63357180158194 1.49031742860624 1.76296215013611 1.51059846130598 1.46411905425473 2.28081593831548 1.25540251739804 1.86634249901716 1.87841255716854 1.82548305229867 2.12517494178016 1.78221776456999 1.79226770464868 1.83030237424907 1.79473520862250 1.70911205096802 0.187909683873331 0.197107001981554 0.195677425036310 0.188104246260306 0.192690394217834 0.189362253180631 0.188409908610746 0.193216655815341 0.188205931379487 0.186708827443569 0.192922160100276 0.185705597013141 0.192468924779314 0.186135307629245 0.192936459784156 0.186516965155848 0.186846997411019 0.184682640196922 0.185904930228811 5 5 + 4896918 4897650 4897260.364 4895753 4897685 + gene protein_coding_gene TRUE TRUE AT5G15110.1 pectate lyase family protein Identical to Putative pectate lyase 19 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q9LFP5); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G01270.1); similar to Pectate lyase, N-terminal; Pectolytic enzyme, Pectin lyase fold [Medicago truncatula] (GB:ABE84460.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectate lyase, N-terminal; (InterPro:IPR007524); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) 0.0427162171872353 0.491793343883913 0.632908470796195 1 0.166626578943097 3.33069588954369 0.0427162171872353 0.0574867305208116 AT5G57020_at 9.12115297095187 9.4230538942959 9.71256637115568 9.7101830955879 9.95991556956559 9.88837297126525 8.8473716470974 8.79741617030512 8.93949682613843 8.79650941537359 9.68403422704857 9.85855743894584 9.29050627609607 9.6446778907208 9.85221829247373 9.5258150953412 9.51844716342416 9.5280742679334 8.75145768205316 0.122605566708077 0.115492920668267 0.11666453195623 0.117534725902554 0.12261425198372 0.123542431804735 0.120027263641293 0.115492920668267 0.125850796879916 0.129801689684167 0.115492920668267 0.115492920668267 0.116407494581084 0.117976485088115 0.116872397135257 0.117645173284447 0.117224875963605 0.116605323232819 0.124782535891409 5 5 + 23093502 23093957 23093733.909 23092093 23094127 + gene protein_coding_gene TRUE TRUE AT5G57020.1 NMT1 (N-MYRISTOYLTRANSFERASE 1) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase. Identical to Glycylpeptide N-tetradecanoyltransferase 1 (EC 2.3.1.97) (Peptide N- myristoyltransferase 1) (Myristoyl-CoA:protein N-myristoyltransferase 1) (NMT 1) (Type I N-myristoyltransferase 1) (NMT1) [Arabidopsis Thaliana] (GB:Q9LTR9;GB:Q9M6E3); similar to N-myristoyltransferase-related [Arabidopsis thaliana] (TAIR:AT2G44175.1); similar to Os01g0708100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044024.1); similar to N-myristoyl transferase [Triticum aestivum] (GB:AAS67031.1); contains InterPro domain Myristoyl-CoA:protein N-myristoyltransferase; (InterPro:IPR000903) 0.0421556202954725 0.489613983780359 0.634399326792666 1 0.165564273608208 18.6534770726213 0.0421556202954725 0.054385368176792 AT5G52410_at 3.95339777720819 3.39523669197894 4.39673762376179 4.37862215735291 4.37270424569192 4.30040462017717 3.74865922796613 3.10201432669499 3.79677265426752 3.4249657145255 4.5934666100615 4.65543592598491 3.86281635699718 4.37779949766909 4.00224511487806 4.24714216727139 4.27449661260835 4.27545669514328 3.36370893634117 0.190026440755125 0.186360498852360 0.191936141331690 0.189305070134120 0.186935160223594 0.189717460765044 0.189387637310788 0.191102716830641 0.192390523742502 0.186360498852360 0.186997701142444 0.189867922647381 0.186360498852360 0.187456011771823 0.186360498852360 0.186360498852360 0.186558542500687 0.186360498852360 0.198870975075898 5 5|0 +|/ 21295750 21296477 21296151.7 21293182 21296670 + gene protein_coding_gene TRUE TRUE AT5G52410.1|AT5G52410.2 |oxidoreductase/ transition metal ion binding similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23890.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG00038.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1); contains InterPro domain S-layer homology region; (InterPro:IPR001119)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23890.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABG00038.1); similar to Os03g0862100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051986.1); contains InterPro domain S-layer homology region; (InterPro:IPR001119); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) 0.0591881693732724 0.489523757509952 0.634461085512637 1 0.165520390663184 7.86326698766473 0.0591881693732724 0.148388580191818 AT5G60950_at 7.6213570654155 8.06911497147516 7.787168839921 7.81155768650571 6.66005695195364 6.5922986963033 2.80015654437008 2.69310809581735 6.16438642626187 4.76330273370858 5.12307865365722 6.36801022394694 4.0879265326623 5.43981423768303 4.97680464903744 4.04911421476615 3.74624106686306 4.86439329776304 3.66199714770482 0.270270707282954 0.270779580658320 0.265080243059184 0.280170133478252 0.270705198609466 0.277920766264717 0.284894921741133 0.272189761135878 0.276038438830331 0.268296147512937 0.268109203228100 0.267002926563087 0.26440098064042 0.26440098064042 0.265976169835587 0.268401935646213 0.280324409426598 0.271606677446137 0.272502022923863 5 5|0 -|/ 24544398 24545192 24544726.143 24544331 24545310 - gene protein_coding_gene TRUE TRUE AT5G60950.1 phytochelatin synthetase-related Identical to COBRA-like protein 5 precursor (COBL5) [Arabidopsis Thaliana] (GB:Q9FME5;GB:Q6IDL3); similar to COB (COBRA) [Arabidopsis thaliana] (TAIR:AT5G60920.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13304.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918); contains InterPro domain Cellulose-binding family II/chitobiase, carbohydrate-binding; (InterPro:IPR012291) -0.0457856559125497 -0.489377620530024 0.63456112058672 1 0.165449331021391 11.1019281708565 -0.0457856559125497 0.0806391115390222 AT5G50890_at 2.68044666083599 2.64569479332210 3.33131492156811 2.72692661708053 2.93415379169062 3.058962835573 3.12514664224707 3.1369294911689 2.96545004750187 2.88248527540293 3.76083718893602 3.74845982274744 3.48060303493713 3.31707301165944 4.07232461558669 3.91443985623368 3.90490605069893 3.89103847220623 2.64115612821756 0.206164706936522 0.198171327247708 0.197504919408675 0.196932367188163 0.200600712272546 0.200625182128899 0.20028285254615 0.196217842364677 0.202742764677783 0.204096217017279 0.199246563436775 0.207467643024747 0.206266271961402 0.202197236041082 0.198919487877969 0.198037861376449 0.197645991914658 0.20135490670173 0.199641047168406 5 5 + 20720863 20721373 20721132.636 20719910 20721461 + gene protein_coding_gene TRUE TRUE AT5G50890.1 similar to lipase class 3 family protein [Arabidopsis thaliana] (TAIR:AT2G05260.1); similar to Os01g0243000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042560.1); similar to Os01g0751600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044260.1); similar to lipase class 3-like [Oryza sativa (japonica cultivar-group)] (GB:BAB84413.1) 0.05040754622745 0.489089509456443 0.63475836354443 1 0.165309295156502 6.2504006726857 0.05040754622745 0.106987684873428 AT5G57810_at 1.04187948792324 1.32815652051197 1.48159242494862 0.862715281569932 1.07322839177073 1.36245750956098 1.20920308797077 1.35366343227854 1.25572319520951 0.896009493979645 0.699666209642275 1.23838457807049 1.16778952817799 1.26205054064305 1.28926609958246 1.06380633596637 0.815246112996905 1.16576815364013 0.884158347491153 0.217617198168827 0.213681458396034 0.230388371859342 0.222903948185975 0.221309956803807 0.215292992674681 0.21569978484283 0.222552118299108 0.224188671788917 0.244456192453791 0.231121522365593 0.217827937514098 0.224299616346353 0.217253090944954 0.231199538571738 0.221294058685948 0.234340011142371 0.21827762474782 0.222705566285863 5 5 - 23441708 23442427 23442064.273 23441496 23442873 - gene protein_coding_gene TRUE TRUE AT5G57810.1 TET15 (TETRASPANIN15) Member of TETRASPANIN family similar to TET14 (TETRASPANIN14) [Arabidopsis thaliana] (TAIR:AT2G01960.1); similar to CD9/CD37/CD63 antigen [Medicago truncatula] (GB:ABE85915.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) -0.0552013985675529 -0.489016413825124 0.634808410082556 1 0.165273779651193 2.26396745393354 -0.0552013985675529 0.130594453304875 AT5G48210_at 0.887934962575864 0.778789621111396 1.16996092639879 1.23325289671767 1.06315664910085 0.927519505056891 1.07103306403432 0.944903073757142 1.34868201684057 1.15003331286214 1.06006822620982 1.17384604943426 1.25493206414692 1.39099712598151 0.966713763032336 0.97764059413629 1.47328260303577 1.52328771899264 1.04045012033624 0.19353432265521 0.194835790674638 0.193394818826219 0.187042405404047 0.187042405404047 0.187042405404047 0.187042405404047 0.188691848128824 0.192421573411855 0.197227441210591 0.189541567276721 0.191425429226348 0.193894681193350 0.199255818608073 0.191668051302696 0.187042405404047 0.198192008618351 0.197728621276004 0.191526108174288 5 5 + 19565685 19565947 19565814.818 19565640 19566367 + gene protein_coding_gene TRUE TRUE AT5G48210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G42565.1) 0.0405077488269376 0.488946546988494 0.634856247744848 1 0.165239837670501 2.21322775474454 0.0405077488269376 0.0387830862163535 AT5G12260_at 5.12983761866524 5.22250895973755 6.08556541462523 6.29031835162596 6.70328041049707 6.59585528723406 6.04921174980092 5.49360444159689 5.01791868558191 5.05029673665120 6.46909335262327 6.62456157459701 6.43946443242722 6.40514161125515 6.30120545905391 6.31608462244622 6.39318628916827 6.18553611594222 5.52851645545477 0.196711640813709 0.196066527256584 0.197555775851445 0.196318496974310 0.195607888905147 0.197582479780091 0.196522702103785 0.196104641418887 0.206152281516025 0.199655882754007 0.195095050420885 0.197539104908652 0.197285263834079 0.218301714684688 0.199776728769629 0.196713630891827 0.203685343774025 0.200605577218432 0.207898238542787 5 5 + 3968088 3968659 3968385.909 3966366 3968879 + gene protein_coding_gene TRUE TRUE AT5G12260.1 similar to glycosyltransferase family protein 2 [Arabidopsis thaliana] (TAIR:AT5G60700.1); similar to Sugar transporter superfamily [Medicago truncatula] (GB:ABE86463.1); contains domain Nucleotide-diphospho-sugar transferases (SSF53448) 0.050081680710311 0.488922267583963 0.634872872206816 1 0.165228043584156 11.7416201832654 0.050081680710311 0.105371872211640 AT5G16560_at 3.93759772796784 3.74009771789089 3.64935900079133 3.89328066428154 4.45623761991238 3.79415757076075 3.26411515202819 3.72635204865211 3.32762879867527 3.50256522037454 4.88289353999842 4.87393448048041 4.64582117272487 4.97926209240698 4.29131478961275 5.23248924048465 4.12090512808211 4.14603901713327 3.27742756369761 0.221475002294737 0.216880900351671 0.215974186372132 0.219203193580444 0.227102676783082 0.218218983876503 0.220702506166730 0.228975169229071 0.235720059852649 0.220998613797262 0.217766200479895 0.215268898013458 0.230230734550344 0.219579753754038 0.220102702494358 0.220222862543724 0.224153825616896 0.225890417731527 0.232928961429105 5 5|0 -|/ 5408244 5410455 5409420.7 5406866 5411427 - gene protein_coding_gene TRUE TRUE AT5G16560.1 KAN (KANADI); transcription factor Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule. similar to KAN2 (KANADI 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32240.1); similar to myb-like DNA-binding domain, SHAQKYF class, putative [Medicago truncatula] (GB:ABE90149.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0593822224263769 0.488250610017664 0.635332849645539 1 0.164901997026362 7.81554450121791 0.0593822224263769 0.149921378508659 AT5G10800_at 2.39133973073452 2.45886878685849 3.03445451895316 2.40149670907834 2.98608556631796 2.85869810041436 2.87984496531219 2.16077450688074 2.85519449658393 3.0989468672555 3.28970605410035 3.08246036754834 3.31656768798710 3.18169970057130 3.41518288316642 3.0282515639797 3.1838501378733 3.29371965445595 2.81925493992061 0.180585518718729 0.180682443684313 0.187292909677920 0.193595823110276 0.178030272673742 0.180762468115949 0.178030272673742 0.181135992180949 0.183638130161350 0.185730652741975 0.181509275999238 0.189792646990339 0.184768587602529 0.189680954609701 0.188088719170855 0.178030272673742 0.183984296004946 0.184869060250599 0.179577424259947 5 5|0 -|/ 3412960 3413853 3413466.9 3412655 3418383 - gene protein_coding_gene TRUE TRUE AT5G10800.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G25060.1); similar to putative U2-associated SR140 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28014.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Regulation of nuclear pre-mRNA protein; (InterPro:IPR006569); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain mRNA splicing factor, Cwf21; (InterPro:IPR013170) -0.063450365743064 -0.487789602164724 0.635648659371078 1 0.164678454510334 5.72064295596721 -0.063450365743064 0.167647517529245 AT5G54730_at 7.3180175782928 7.2740758545604 8.521974474023 8.35663945182513 8.39447190416417 8.61190265188796 7.14331794715629 6.54686972701672 7.250568671027 7.64827501734384 7.80814755879442 7.7302447218915 7.9783873939801 7.94886781918541 7.46965167282292 8.25542216917992 8.08022764577364 7.90985475078353 7.58528881590916 0.143862482918214 0.138828367785523 0.149319389383477 0.154156495306491 0.147183363604773 0.148712759844193 0.145544125217417 0.164124833877646 0.161829821202613 0.139720469456888 0.139432469853412 0.143965002398226 0.141352048227079 0.151590263032478 0.147478637416477 0.140968493234733 0.154058847067654 0.137223860727765 0.144751561674176 5 5 - 22251296 22251938 22251604.182 22251015 22254030 - gene protein_coding_gene TRUE TRUE AT5G54730.1 AtATG18f (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) f) similar to AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h) [Arabidopsis thaliana] (TAIR:AT1G54710.1); similar to Os05g0405900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055510.1); similar to Os01g0786900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044475.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85085.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.0515717548511048 -0.487541786625503 0.635818454837854 1 0.164558372011752 15.4670643492715 -0.0515717548511048 0.113781718004061 AT5G11710_at 8.1253466343206 8.30450982607794 8.77393911758791 9.06074784886103 9.29673510732393 8.86177925858721 8.6192967605583 8.45468068135828 8.46152550315425 8.08748828343714 9.58407553341778 9.48865725099907 9.41958731108825 9.20494119533634 9.44274267273658 9.2231264072993 8.88413257042208 9.11064515788156 8.03274923218992 0.120815056686888 0.117833215318018 0.120503747888923 0.11706924965242 0.120462831413806 0.130320635171175 0.119511659803816 0.121432933510342 0.123338710216448 0.128500816049218 0.119408446749625 0.119037380232151 0.118603229669829 0.117561456647035 0.127554802361034 0.118316128963930 0.127099975270836 0.120021419300373 0.119611668742929 5 5|0 +|/ 3775495 3776250 3775818.6 3772819 3776663 + gene protein_coding_gene TRUE TRUE AT5G11710.1 (EPSIN1); binding EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues. similar to binding [Arabidopsis thaliana] (TAIR:AT2G43160.4); similar to Os04g0599900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053755.1); similar to Af10-protein [Avena fatua] (GB:AAB68030.1); similar to Os01g0738600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044190.1); contains InterPro domain Epsin, N-terminal; (InterPro:IPR001026); contains InterPro domain Phosphoinositide-binding clathrin adaptor, N-terminal; (InterPro:IPR008943) 0.0487378714205891 0.486445642295987 0.636569761996773 1 0.164027917387582 17.4314591636634 0.0487378714205891 0.0995092519150662 AT5G41580_at 3.20205334834282 3.13361870736982 3.68556778185931 3.4208868567065 4.56584524965295 4.24737557701859 3.23954350735899 2.94220538557167 3.29104635352175 3.85538531053517 3.90664459561294 4.47881860266406 4.14855941551741 3.99790246504830 3.72740868955228 4.0340341467605 4.08507246291067 4.2141309378602 3.41918084934515 0.208707488085760 0.2064187391697 0.211973194711139 0.211668112628739 0.205732639814342 0.219528599130162 0.212844892048735 0.217362619330190 0.214059406275604 0.219670689319237 0.205282259043574 0.207891523569041 0.210725607329979 0.205626371521327 0.207843715496308 0.208775828768185 0.210282092252734 0.206017270014821 0.209105737296991 5 5 - 16643807 16644222 16644022.727 16643565 16648011 - gene protein_coding_gene TRUE TRUE AT5G41580.1 zinc ion binding similar to EMB3001 (EMBRYO DEFECTIVE 3001), zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G08910.1); similar to transcription factor [Vicia faba var. minor] (GB:CAA66482.1); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) 0.0468107648687000 0.485656596739352 0.637110846492493 1 0.163646780802011 7.35260817788082 0.0468107648687000 0.0890134017842735 AT5G14995_at 1.91317784996123 2.01033761736409 2.53794183556705 2.18096114231089 1.69633812265836 2.52837303660911 1.57448929751420 2.08307644007626 2.78604425070963 1.91412972170314 2.24259419803356 2.39279769493959 2.84839816065636 1.47827922875225 2.27233016857656 1.96865710562007 3.01234942010655 2.31854713499612 2.41887022296921 0.338839604318301 0.356168133041104 0.3575988072416 0.35949563494709 0.342574334957475 0.338839604318301 0.338839604318301 0.338839604318301 0.338839604318301 0.356173804707435 0.338839604318301 0.363183652924321 0.345228122369811 0.338839604318301 0.338839604318301 0.353750437531707 0.356821790655502 0.361691955050957 0.344447840130504 5 5 + 4853606 4853672 4853638.25 4853416 4853721 + gene protein_coding_gene TRUE TRUE AT5G14995.1 Encodes a ECA1 gametogenesis related family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15000.1) -0.0660480858627696 -0.484147711735627 0.638146175771824 1 0.162919579150089 4.41046635313471 -0.0660480858627696 0.180493460442311 AT5G46000_at 0.793475334680869 0.972494261093775 1.30904443967840 1.27751557152194 0.382440507844914 0.798138986903281 1.15205925716394 0.68988166225016 0.516028462991769 1.346717648114 0.733680573975079 0.715752055411788 1.14107221142114 0.996787323548663 1.03708673904337 0.80973524263869 1.43682427105939 1.27202029052368 1.22886347002071 0.194245795829334 0.202186982340502 0.195477776667628 0.19671427204025 0.194193231753639 0.193679809734715 0.194739417724508 0.194698308156910 0.197572782099225 0.194669617223442 0.195876300587265 0.192448625024670 0.198222415643998 0.193864132904594 0.196144054974874 0.192448625024670 0.197900236698994 0.204486982773932 0.193472234237082 5 5 - 18671547 18672325 18671903 18671546 18673603 - gene protein_coding_gene TRUE TRUE AT5G46000.1 jacalin lectin family protein similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT2G39330.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Jacalin-related lectin; (InterPro:IPR001229) -0.0508781421866718 -0.484139316125127 0.638151938731743 1 0.162915538951969 1.94608443538960 -0.0508781421866718 0.112079477975120 AT5G42340_at 1.46444303427182 1.46126916938568 1.44456350559325 1.49257178795293 1.33696330727041 1.46965866163652 0.849303505872918 1.39893940329833 2.10918784558745 1.72503771950595 1.936317853067 1.78389348879214 1.78568589205838 1.84850548262186 2.05236141969238 1.7739933008954 1.96518066530088 1.66527566720039 1.74026494136847 0.230111129969175 0.229952090325712 0.237172528853024 0.235247539094265 0.235571318390428 0.237416416601844 0.238150710024744 0.230044286683315 0.228448265391184 0.229322231706002 0.230571007278732 0.237883900120052 0.239094340557624 0.231764250405623 0.234821471668039 0.228802543023447 0.233458819831197 0.237708764129503 0.232309029659173 5 5 - 16945410 16945762 16945548.545 16945138 16947700 - gene protein_coding_gene TRUE TRUE AT5G42340.1 binding / ubiquitin-protein ligase similar to armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana] (TAIR:AT3G46510.1); similar to putative cell death-related protein SPL11 [Oryza sativa (japonica cultivar-group)] (GB:BAD61809.1); similar to Os08g0481200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062063.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) -0.0482699570631752 -0.484134873861022 0.638154988024607 1 0.162913401239627 3.21949665858899 -0.0482699570631752 0.0982033826021267 AT5G23790_at 1.55295102808352 2.03061939632878 1.87115551565251 1.64121601049727 1.76384913878791 1.97880865012621 1.65078718495167 1.34510650917163 2.00927518110322 1.86884582506062 2.20232476385668 2.24197673333123 2.01245881108885 2.00119229142572 1.86533423284278 1.71627885198154 1.74548023533119 2.05348116741512 1.9936499558668 0.191142115010943 0.201420267730843 0.195077122891730 0.195558036729192 0.190237075245061 0.199487359735639 0.192929431984263 0.193384307603147 0.209879063081786 0.191057368352528 0.196985145173682 0.188834784370841 0.191235531593460 0.198730981647234 0.190508392657228 0.192500171188766 0.189636089919128 0.189896895787526 0.194628951983172 5 5|0 -|/ 8020201 8020906 8020646.3 8020107 8021600 - gene protein_coding_gene TRUE TRUE AT5G23790.1 ATGOLS5 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 5); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups similar to ATGOLS6 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 6), transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT4G26250.1); similar to galactinol synthase [Cucumis melo] (GB:AAL78687.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) -0.0508872477045967 -0.483920390434065 0.638302223730821 1 0.162810209487743 3.69784811582628 -0.0508872477045967 0.112243995765579 AT5G56130_at 5.5840278086001 5.23687260417535 6.15273503282208 6.33527901269547 6.53125666854942 6.33505749318795 5.59291091766254 5.9920336811461 5.33819317681786 4.91765536874412 6.31820974525906 6.43310286278661 6.36507640614975 6.6532386740728 6.72571850247008 6.38902191822445 6.49405523284556 6.27169336316839 4.92080035281714 0.180456871302504 0.177540805407192 0.191199766901562 0.185841555884334 0.178556145178591 0.180045742360551 0.185784251484839 0.188556618880110 0.202913923905444 0.177700206590047 0.175379002312888 0.176688903427459 0.186475745274433 0.180741113862998 0.177992553759498 0.179900782428954 0.188106352286270 0.186594451197183 0.190051858786171 5 5|0 -|/ 22740185 22740931 22740580.222 22739711 22742314 - gene protein_coding_gene TRUE TRUE AT5G56130.1 transducin family protein / WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G67320.1); similar to Os09g0298400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062809.1); similar to THO complex 3 [Danio rerio] (GB:NP_001003758.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680) 0.0490338557943796 0.48370832230739 0.63844781750378 1 0.162708222650263 11.7275954294791 0.0490338557943796 0.102618955095524 AT5G22970_at 1.18703924617398 0.783041873267937 0.797563709781516 0.94802539408484 1.05594406603949 0.78391402248618 0.996577531403611 0.844508570697734 0.502792830332138 1.05240667132795 0.672771410546201 0.894662035692764 1.35763412393460 1.04655486940367 0.624552359176398 0.72439892497907 1.01523322552073 0.786198815986746 0.868203318532936 0.200577375719816 0.193381118516327 0.195677017229537 0.193063958805723 0.193063958805723 0.198587907157331 0.193755122925879 0.193063958805723 0.208792849959860 0.194465960352165 0.202033540919561 0.200020720148150 0.193063958805723 0.197624453270294 0.199574997511986 0.19497938989526 0.209797650178961 0.204386625098298 0.196669107704965 5 5 - 7686363 7686744 7686562.091 7686256 7686782 - gene protein_coding_gene TRUE TRUE AT5G22970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G60000.1) -0.0470991843446306 -0.48325926271169 0.638756168766754 1 0.162492403670682 1.77360263210159 -0.0470991843446306 0.0920575843814933 AT5G54950_at 1.19789905196941 1.78468711816954 1.97085424077178 2.33753764824431 1.08569435791483 2.44366018593518 1.66538221096423 1.61461425352076 1.53140345215572 1.68826016668596 2.09188532942049 1.5252777328632 1.45609942032661 1.37621206221847 1.75904248153127 1.75788728445345 1.56318319970368 1.79493065284395 1.67388699891146 0.190379629461407 0.193696392884982 0.194200568940128 0.194094270163311 0.192264152005637 0.196126442635565 0.195274279476393 0.189253699652873 0.20166609798578 0.192145991127858 0.196242707147716 0.195248842874625 0.192920119230232 0.193029576903222 0.189253699652873 0.189253699652873 0.196259268834828 0.205775843899574 0.189253699652873 5 5|0 -|/ 22327090 22327444 22327355.2 22327058 22327468 - gene protein_coding_gene TRUE TRUE AT5G54950.1 aconitate hydratase-related / citrate hydro-lyase-related / aconitase-related similar to aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative [Arabidopsis thaliana] (TAIR:AT4G26970.1); similar to putative aconitate hydratase 1 [Sorghum bicolor] (GB:ABE77202.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972) 0.0868165699509514 0.480667296636618 0.64053736738415 1 0.161250436508216 3.41091528827185 0.0868165699509514 0.263897044380258 AT5G09270_at 3.8153504794914 4.72924881507786 5.00991541360457 5.04988178511352 4.97146307152349 5.13862195699206 3.41667830690751 3.66053129179377 2.85460667068880 3.49966329806387 3.4130055643557 3.50047347308753 3.16327351608879 3.19046610802509 3.67287921009668 3.28620471394318 3.91520294587263 3.90843084542852 2.91607567447808 0.230007357532512 0.234796544837421 0.243648779569969 0.227316453346730 0.232293706707716 0.244442661274112 0.230757141816127 0.231184629696688 0.224929502079010 0.227269739664313 0.228300684672176 0.224929502079010 0.233845221989806 0.244140812966077 0.234196254432261 0.231846510252307 0.242356747181691 0.235057266799399 0.235245230700567 5 5 + 2879682 2879982 2879831.091 2878885 2880817 + gene protein_coding_gene TRUE TRUE AT5G09270.1|AT5G09270.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE83174.1) 0.0620447143068329 0.479277249097821 0.641493588228068 1 0.160587006444406 7.77214002082428 0.0620447143068329 0.166367903629384 AT5G16110_at 9.19106823132696 9.45708426421613 9.72635457397177 10.0338330991594 10.7885614489791 10.7219508399691 8.74554160215518 9.05043296041554 9.33614814405412 8.78769215457976 9.46707755226267 9.16011551242081 9.83112759244151 9.56599055830886 8.85668405107427 9.38663435785886 9.48539501437829 9.3404570642767 9.06344067617935 0.134118749438732 0.130467130899205 0.144877221621165 0.139302014335153 0.136884205117671 0.145648856771869 0.138189412374260 0.134926238961914 0.140272357614786 0.138344599859106 0.127629141435170 0.131862772119058 0.129276812571825 0.131306305066277 0.139157220306657 0.133290854187142 0.137427736979444 0.133210509488449 0.133131108750679 5 5 - 5261244 5261902 5261515 5260607 5262843 - gene protein_coding_gene TRUE TRUE AT5G16110.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02555.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96917.1) 0.0460384242417868 0.478188493896049 0.642243025361938 1 0.160068655371567 18.9389094797652 0.0460384242417868 0.08869845624673 AT5G45360_at 8.38290503735012 8.65113755213245 9.2497426080456 9.430463752631 9.72785563139674 9.6040227839255 8.47259625156084 8.53710269256394 8.3721801138593 8.13476441004743 8.79135345546469 8.56817649186536 8.89779666867616 8.7342996102867 8.44238440869926 8.93941833104945 8.8415853753526 8.70259217649272 8.08085681106199 0.139085326934668 0.137106169013632 0.139103623779211 0.135432553103261 0.138130746179961 0.136964184467590 0.136023012283552 0.133963603300968 0.141020132554052 0.137736814462416 0.137239232688242 0.137376772759396 0.134761478193626 0.132883549559299 0.140353062600071 0.139985689342815 0.133921407986940 0.137350698372701 0.138977374940323 5 5|0 -|/ 18402012 18403007 18402471.333 18401748 18404012 - gene protein_coding_gene TRUE TRUE AT5G45360.1 F-box family protein similar to F-box family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53635.1); contains InterPro domain UL92; (InterPro:IPR004289); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.0419608335764827 -0.47818634906661 0.642244502153385 1 0.160067635339310 17.4747955852302 -0.0419608335764827 0.0609645003217395 AT5G11780_at 1.58896178424007 1.79851821663928 2.10200052107100 1.65129726934428 1.65889160733689 1.89989720915409 1.81332695694360 1.85201594927214 2.06768704246393 2.13958222509200 2.44673861325139 2.35137151822596 2.24976373903670 2.02369552048986 2.34448509280529 2.17365533388694 2.45504703029837 2.33156082889308 2.14742563916423 0.202044081904721 0.196347630827912 0.203670299502089 0.202968702289824 0.202094876158788 0.200691993666160 0.200357029957019 0.200581402667724 0.195168797599203 0.195895450621635 0.194873484611222 0.19634573492239 0.199951697573261 0.196608768146478 0.194873484611222 0.194873484611222 0.197374236267269 0.194873484611222 0.206392500115080 5 0|5 /|+ 3795373 3795922 3795687 3793859 3796143 + gene protein_coding_gene TRUE TRUE AT5G11780.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53434.1) -0.0471591132457088 -0.477195229219206 0.642927097005417 1 0.159596748592993 4.00324936184234 -0.0471591132457088 0.0958272692422434 AT5G24670_at 9.11500138041367 8.80355406666373 9.81151879607513 9.58171989440211 9.94716374127133 9.53736936137795 8.36220499074188 8.04427795275845 8.92422224897276 8.96084596542478 9.4991153997144 9.26155375556934 9.3893632377077 9.38130320987011 9.02698596148237 9.73311315400385 9.02665136611937 9.36683061607705 9.32432756592179 0.119304816980631 0.117101905713161 0.117843882574360 0.118779619993498 0.118685850047580 0.121336233438142 0.119247905911217 0.118969141984626 0.120698608567328 0.121339967670462 0.114262619780972 0.114408599987039 0.117133563764080 0.115481816670653 0.118258539417027 0.114199221769472 0.126679440045979 0.118554479172509 0.116971153083723 5 5 + 8450353 8451004 8450618.364 8448100 8451221 + gene protein_coding_gene TRUE TRUE AT5G24670.1 hydrolase/ zinc ion binding similar to Os09g0128600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062614.1); similar to Subunit of tRNA-specific adenosine-34 deaminase (ISS) [Ostreococcus tauri] (GB:CAL53029.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125) -0.0500589061065455 -0.476499884603767 0.643406194838661 1 0.159266943202825 18.3530578634669 -0.0500589061065455 0.111994047424137 AT5G19380_at 3.79327265152998 3.71848432387851 4.35689834617401 4.08753220103764 4.52266580697633 4.03707080622851 3.47564754010284 3.43142697130269 3.36746178030394 3.72294380118002 4.67385010368958 4.26964757400826 4.03804609833531 4.07622414678952 3.90497015145227 4.19733409672081 3.97016729288709 4.13130277329376 3.3390439936999 0.232984469602338 0.227368553995741 0.234076954422412 0.227495975579266 0.227090859184175 0.227443256540814 0.227399678627336 0.232633296331921 0.232104216751109 0.229086184073948 0.242242497028052 0.2265225632834 0.223953368535092 0.227647979753896 0.230924510250082 0.222048304670065 0.233910173816993 0.231332451096096 0.234906705812185 5 5|0 -|/ 6527036 6528141 6527397 6526827 6530594 - gene protein_coding_gene TRUE TRUE AT5G19380.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12170.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE77682.1) -0.0473356754888328 -0.476425676708748 0.64345733470367 1 0.159231773152802 7.74496281659133 -0.0473356754888328 0.0972667862799538 AT5G18800_at 8.81952151629502 8.93890667460612 9.41743557614957 9.5114659994881 9.60526007849851 9.72180515669296 8.76880238177438 8.71926328061561 8.7509533675121 8.8390901054383 9.6229009736285 9.66204876202492 9.3770671993055 9.24547191077202 9.68848053504198 9.35209073990054 9.18081318269541 9.5408087749362 8.74774465082876 0.121018128534329 0.118070625978019 0.11763871140425 0.114072184746491 0.118985749049783 0.120944818061556 0.116271015447988 0.123253190620357 0.122899334932823 0.114072184746491 0.122367615893240 0.119623806281152 0.120711364116635 0.119227167442121 0.116408381636282 0.118430288802887 0.120065239164945 0.120328199315753 0.120784784213125 5 5|0 +|/ 6267308 6268363 6267663.4 6267055 6268640 + gene protein_coding_gene TRUE TRUE AT5G18800.1|AT5G18800.2 NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein similar to NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein [Arabidopsis thaliana] (TAIR:AT3G06310.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96885.1); contains InterPro domain CHCH; (InterPro:IPR010625) -0.0389568177742965 -0.474588298422916 0.644724168721016 1 0.158362635580211 18.3067940668723 -0.0389568177742965 0.0342330883137686 AT5G45540_at 1.21567914364448 1.19143607940436 1.13128171167089 1.35906623937856 1.03044341036143 1.34824688909297 1.35358987327743 1.53260902175312 1.56269590433775 1.79132424615756 2.10235964658845 3.11559867496571 1.68843715780477 1.95722358707888 2.21697880664844 2.21435232157461 1.85611618340012 2.24248264097587 1.88913863543372 0.210121493589246 0.210121493589246 0.211144906273242 0.212924464135785 0.214369666088336 0.214967439666905 0.218496201833213 0.217228745672952 0.215615878641515 0.212985274314754 0.215796386257601 0.231579448692224 0.217004141249420 0.219963456116872 0.216347059661186 0.217423661874442 0.213008109277396 0.216531332478621 0.221580220040379 5 5 - 18475522 18476007 18475759.273 18475381 18478048 - gene protein_coding_gene TRUE TRUE AT5G45540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45470.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45530.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45480.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD87859.1); similar to Os07g0105800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058700.1); similar to Os07g0109100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058721.1); contains InterPro domain Protein of unknown function DUF594; (InterPro:IPR007658) 0.0434487431985388 0.474195095946969 0.644995427598497 1 0.158177055214171 3.23125065741755 0.0434487431985388 0.0745382465125957 AT5G01020_at 9.51447245344784 9.74656693813187 9.93397488421466 10.0604896423942 10.4632659551404 10.4478967123350 9.5021343070923 9.75631562881208 9.4876020685208 9.347276994194 10.5697603367024 10.3973259876446 10.3398641085990 10.2743630270632 10.3956242465000 10.3717187126303 10.0927818796084 10.2556742403134 9.67710373811052 0.0925122906379051 0.0925122906379051 0.0999260098836376 0.0940490078262875 0.0957040355579505 0.092661648494459 0.0947487623753695 0.0955470051615466 0.111687211567887 0.100885726131357 0.0958119408355962 0.0925122906379051 0.0938129753263692 0.0933916412418578 0.0942719090438184 0.0925122906379051 0.103583619114233 0.097396798457602 0.0966799531550733 5 5|0 -|/ 6323 7253 6640.6 5916 8443 - gene protein_coding_gene TRUE TRUE AT5G01020.1 protein kinase family protein similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G05940.1); similar to Protein kinase APK1B, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95681.1); similar to Os11g0121400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065612.1); similar to Os12g0121100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066022.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0418314396729214 0.473035071930806 0.645796009969826 1 0.15763041332458 19.8487062323582 0.0418314396729214 0.0635179437743265 AT5G64100_at 1.68127704965343 1.24577056921731 1.97226930222686 1.72342522679437 1.09713561492212 1.71613722433023 1.53884573986751 1.37706063625532 1.97075184171621 1.67914379869069 1.81971890724678 1.68077958804901 1.62448580597046 1.65577293037994 1.13992195970982 1.22083036436613 1.8715394116925 2.0209338214041 1.38009151220420 0.195474361740534 0.194461815068854 0.194544406123511 0.192378694561240 0.191389517932045 0.192842942639237 0.191471438498238 0.19047365330069 0.197266267383310 0.195250603779322 0.188595678541824 0.188281195376241 0.193566644505066 0.190215193382211 0.199453681429402 0.198974875824382 0.191604135790995 0.202151510320616 0.189573032503657 5 5 - 25668142 25668685 25668398 25667867 25669349 - gene protein_coding_gene TRUE TRUE AT5G64100.1 peroxidase, putative Identical to Peroxidase 69 precursor (EC 1.11.1.7) (Atperox P69) (ATP3a) (PER69) [Arabidopsis Thaliana] (GB:Q96511;GB:Q8RWL8); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G64110.1); similar to peroxidase precursor [Solanum lycopersicum] (GB:CAA64413.1); similar to cationic peroxidase [Solanum lycopersicum] (GB:CAG25463.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) -0.0553562442283055 -0.471604614655323 0.64678387836365 1 0.156958096072423 3.19694528681142 -0.0553562442283055 0.140688937563680 AT5G47270_at 1.39046646255794 0.996768410886554 1.34259066451376 1.03132066938920 0.622033055789489 1.12984343935135 0.802278461537397 1.16866866766402 1.11270288534040 1.06794944239707 1.11147167316693 1.14732325237578 1.49697837061223 0.77220424299103 1.25344635778826 0.844994276146062 1.13078104782309 1.37986140603645 0.977510284998825 0.18891941467873 0.185298123363521 0.183653261019865 0.183653261019865 0.185582891004457 0.189768928586713 0.194518472625057 0.183653261019865 0.192077924653617 0.188066533579076 0.186535054944843 0.184366569868231 0.187060971301598 0.184036124796335 0.190159680136544 0.186910065206335 0.192902232073295 0.195713898852877 0.187638300388831 5 5 + 19209428 19209705 19209575.182 19209411 19209743 + gene protein_coding_gene TRUE TRUE AT5G47270.1 disease resistance protein-related similar to AIG1 (AVRRPT2-INDUCED GENE 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G33960.1); similar to GTP binding protein [Brassica rapa] (GB:ABK78687.1); contains InterPro domain AIG1; (InterPro:IPR006703) -0.0549300140095062 -0.471262206941494 0.647020449903667 1 0.156797452582323 2.15792295360100 -0.0549300140095062 0.138875729890114 AT5G04730_at -0.327419338338845 -0.108877321768662 0.0094602281707959 -0.606578641285968 -0.0453734208257497 0.308299612672334 -0.219307092101921 -0.283926902902719 -0.337177215469277 -0.153226120496840 0.154836333932575 0.185803705125686 0.229811318892447 -0.167789708488163 0.0294511125189687 -0.166593183292383 -0.623489419372142 -0.128034597509052 0.100167207119907 0.200114298302539 0.201112928007774 0.203412234679432 0.200114298302539 0.201374598803429 0.203713579787908 0.209072176169068 0.203131874307413 0.220812685805171 0.207368508785061 0.209561280357082 0.202856447878336 0.200114298302539 0.203946297531897 0.201167365997487 0.203199688578895 0.209738162534679 0.201485972081163 0.203598735060553 5 5 - 1364126 1364568 1364314.364 1364102 1365067 - gene protein_coding_gene TRUE TRUE AT5G04730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04700.1); similar to Ankyrin [Medicago truncatula] (GB:ABE89653.1) 0.0527809780061346 0.47029015130647 0.647692271903005 1 0.156342012231517 -0.254629991742298 0.0527809780061346 0.129099804102248 AT5G58560_at 6.41577860174373 6.74606553645245 7.42623249718481 7.25217062453456 7.79699378342965 7.37746577768169 6.9228792801325 6.89262021436609 6.39210040199371 6.03319636735576 7.74160613793363 7.5337156903652 7.30520590182695 7.4990912180462 7.83886874917807 7.52614028851953 7.39930601768925 7.73992146538004 5.96832465026759 0.178968829793983 0.167779244305480 0.183640814381057 0.176540769643407 0.175414580377261 0.172761714233235 0.176460135724516 0.171816011100320 0.171831273070725 0.177767659532579 0.166874045451323 0.166847381668509 0.174142886760795 0.168717033909879 0.17694366047972 0.166242030718198 0.191017782333934 0.175651571164133 0.179029882495524 5 5|0 +|/ 23688894 23689737 23689409.5 23687621 23690103 + gene protein_coding_gene TRUE TRUE AT5G58560.1 phosphatidate cytidylyltransferase family protein Identical to Probable phytol kinase 2, chloroplast precursor (EC 2.7.-.-) [Arabidopsis Thaliana] (GB:Q67ZM7;GB:Q67ZA1;GB:Q8LAW9;GB:Q9LV00); similar to VTE5 (VITAMIN E PATHWAY GENE5), phosphatidate cytidylyltransferase/ phytol kinase [Arabidopsis thaliana] (TAIR:AT5G04490.1); similar to Probable phytol kinase 3, chloroplast precursor (GB:Q2N2K0); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) 0.0466956402520777 0.469876877135298 0.647978000092682 1 0.156148651947893 13.9558703261855 0.0466956402520777 0.0973278804520631 AT5G04330_at 2.73054812107396 2.59177415211364 2.320519294471 2.44649621998553 2.37976678334793 2.39601597482389 2.18468130812337 2.28672339602113 3.17198298725055 1.79257515881757 3.30988625975161 3.23620434755711 2.85770416997636 2.88919312307002 3.34740726350117 2.67382061065134 2.14262978992941 3.44699658168311 2.27941079714252 0.212430316678778 0.198106711209475 0.210870967569194 0.196269200087936 0.197046380841482 0.199737561160385 0.201780436588205 0.196888400411057 0.195645602210517 0.205266934132743 0.200774942935745 0.200396547721986 0.203910588031796 0.211628541243892 0.203603190109522 0.194589495008116 0.214018070165414 0.201281793434147 0.201445355311450 5 5 - 1212767 1213244 1212974 1212603 1214440 - gene protein_coding_gene TRUE TRUE AT5G04330.1 cytochrome P450, putative / ferulate-5-hydroxylase, putative similar to FAH1 (FERULATE-5-HYDROXYLASE 1), ferulate 5-hydroxylase [Arabidopsis thaliana] (TAIR:AT4G36220.1); similar to cytochrome p450-dependent monooxygenase [Brassica napus] (GB:AAG14962.1); similar to cytochrome P450 [Isatis tinctoria] (GB:ABL07485.1); similar to cytochrome p450-dependent monooxygenase [Brassica napus] (GB:AAG14961.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0387599772152926 -0.469564955630427 0.64819369479568 1 0.156002819592405 5.11838394757933 -0.0387599772152926 0.0370373466400642 AT5G38070_at 1.81181430604124 2.13309782073436 2.53566706876021 2.30449468059907 2.53240004177329 2.30666846189586 2.36596273655139 2.25292450159859 2.06252092711618 2.84590318891489 2.77610060855859 2.88616832359817 2.32643636839603 2.60549682965559 2.86924430400316 3.11469263451954 2.66095491452477 2.13001497215695 2.62969446748509 0.213864905001255 0.216575266142782 0.223592202398218 0.220702185774829 0.222489230773354 0.215709071314513 0.222232965578587 0.224160483158483 0.216286355312435 0.221332356115687 0.217456919622493 0.215371554516646 0.229902350795892 0.228852154962249 0.219816741141463 0.217360219770242 0.223255450355809 0.220963877911283 0.225254094220444 5 5|0 +|/ 15207677 15208785 15208227.222 15207463 15208919 + gene protein_coding_gene TRUE TRUE AT5G38070.1 zinc finger (C3HC4-type RING finger) family protein similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G01275.2); similar to Os01g0121200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041874.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52455.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0440089441700688 -0.469397655528265 0.648309397301174 1 0.155924640093788 4.87230110921024 -0.0440089441700688 0.0812428814771732 AT5G55980_at 1.14594187155353 1.24401629047191 1.55244719947391 1.49038494750507 1.23469084800871 1.75962552395865 1.55353902412855 1.54021596789616 2.00112566707535 1.37323161102150 1.98510259549310 1.52255996603371 1.56920510498648 2.12711948278729 1.9231605709592 1.48218113451731 1.89363584698002 2.3363679139751 1.63918237208591 0.196422659832386 0.207305463531763 0.198884371060935 0.208483806738012 0.196129124929847 0.196129124929847 0.209517332281096 0.203731990944608 0.204180110133857 0.199360511716803 0.202395158120367 0.199607414571776 0.204622900679900 0.205111092103089 0.196129124929847 0.206247577498127 0.201706393826656 0.199621468003218 0.196129124929847 5 5 + 22687545 22687831 22687696.091 22687527 22687868 + gene protein_coding_gene TRUE TRUE AT5G55980.1 serine-rich protein-related similar to serine-rich protein-related [Arabidopsis thaliana] (TAIR:AT3G13227.1); similar to PGPS/D10 [Medicago truncatula] (GB:ABE89320.1) 0.0458145379605502 0.468343589772246 0.649038598987322 1 0.155432686906508 3.20315593930495 0.0458145379605502 0.0930648389983098 AT5G24910_at 1.73675963696708 1.78154295295469 2.41981509134244 1.96835568200013 1.88063864788571 1.97548663487149 1.63786714242048 1.87015686348261 2.49627259529966 1.82001891744248 1.95199073785684 2.04879275177542 2.10093184114461 2.37335974495282 1.63055908537694 1.89222029198660 2.22794766163986 2.60520969395707 1.64692926241539 0.22126647329408 0.219959502017174 0.215874420993681 0.224394212228494 0.219464020392695 0.215874420993681 0.222766201040670 0.217010786722017 0.215874420993681 0.224757356037857 0.216403233167103 0.218428119679074 0.215874420993681 0.235320558719279 0.224840462311790 0.217004992392550 0.228846236264654 0.223708449972712 0.220008760250664 5 5 - 8567757 8568354 8568067.636 8567584 8570361 - gene protein_coding_gene TRUE TRUE AT5G24910.1 CYP714A1 (cytochrome P450, family 714, subfamily A, polypeptide 1); oxygen binding member of CYP714A similar to CYP714A2 (cytochrome P450, family 714, subfamily A, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G24900.1); similar to Os07g0681300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060652.1); similar to Os12g0119000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066011.1); similar to putative cytochrome P450 [Lolium ri (GB:AAK38085.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0452100533939879 0.467852594182485 0.649378401120973 1 0.155203890755342 3.95463619872663 0.0452100533939879 0.0897177531211399 AT5G56360_at 7.32964296524942 7.67620460674893 8.31875107033922 8.41985441085608 8.40719408450724 7.99985817541801 7.32413319607638 7.14827956912792 6.51322984894152 7.14921286447566 8.04338122477598 8.3048002303387 7.7230258830179 7.89630898252668 8.46833132854335 7.61598727433763 7.6389548073142 7.7053849526609 6.76303486077602 0.187044537961673 0.182993595424431 0.187834738182935 0.188508532540553 0.182214836499352 0.187701336168218 0.188701457256826 0.191699636920134 0.202084036980433 0.197767095810011 0.182443805205313 0.179284301090101 0.180631298645476 0.186214838538844 0.179284301090101 0.182964903638551 0.203508805911663 0.186428975347212 0.198820351261743 5 5|0 -|/ 22840815 22842095 22841470.143 22840528 22845251 - gene protein_coding_gene TRUE TRUE AT5G56360.1 calmodulin-binding protein similar to protein kinase C substrate, heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G42390.1); similar to Os01g0276800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042732.1); similar to protein kinase C substrate 80K-H [Xenopus tropicalis] (GB:NP_989356.1); contains InterPro domain Mannose-6-phosphate receptor, binding; (InterPro:IPR009011); contains InterPro domain Glucosidase II beta subunit-like; (InterPro:IPR012913) 0.0467388143187002 0.467408811529639 0.649685600738651 1 0.154997292599986 15.1944969398756 0.0467388143187002 0.0989857395074364 AT5G59740_at 1.23120051106546 1.11766889270098 1.75742409351958 1.65490143176521 1.76012213818056 1.53495076701724 2.01866948480668 2.07414927853349 1.48719138987407 1.36871341173584 1.79922906460835 1.95858757902142 1.77957695742294 1.51215743285211 1.55905486910344 1.41431197302987 1.8841476506071 1.51068125103889 1.44739644662677 0.20763356690119 0.213397133604854 0.215625451209355 0.210366965590142 0.207242899302331 0.212604272258541 0.207304146237172 0.205025781356618 0.216667636766529 0.205675692183479 0.207754238543835 0.213174882969610 0.205807464526098 0.220340939348943 0.222217846576847 0.205417703436743 0.20726081409373 0.205025781356618 0.205025781356618 5 5|0 -|/ 24087746 24088987 24088117.857 24087277 24090281 - gene protein_coding_gene TRUE TRUE AT5G59740.1 UDP-galactose/UDP-glucose transporter-related similar to ATUTR5/UTR5 (UDP-GALACTOSE TRANSPORTER 5), galactose transporter [Arabidopsis thaliana] (TAIR:AT3G46180.1); similar to At3g46180 [Medicago truncatula] (GB:ABE93809.1); contains InterPro domain UAA transporter; (InterPro:IPR013657) 0.0395708190615929 0.467360172392023 0.64971927436005 1 0.154974660586801 3.19946187301002 0.0395708190615929 0.0480769647208542 AT5G04150_at 3.08313790761751 3.16892290317095 3.03773437758521 2.77087588214833 7.29054097637069 7.25604254035654 2.38926998307441 2.55658301510223 2.51355131451470 4.53732402765939 1.44177789089994 2.70729532245623 5.0192141654822 3.28941558881703 1.75590063015031 4.38943539944698 4.4069068659413 1.86284151618128 5.27667294302857 0.284734578780571 0.27757628392826 0.27757628392826 0.281167491091477 0.286673141830789 0.302847792216115 0.280078794479946 0.27757628392826 0.280128058201389 0.285720384324854 0.290472631794420 0.281464652088564 0.306935842473818 0.280366299744564 0.303721899257822 0.27757628392826 0.287492964709579 0.281548828643133 0.279552745044176 5 5|0 -|/ 1138568 1139243 1138888.2 1138560 1139477 - gene protein_coding_gene TRUE TRUE AT5G04150.1 basic helix-loop-helix (bHLH) family protein similar to ORG2 (OBP3-responsive gene 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56970.1); similar to Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE94188.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) -0.0403787856890236 -0.465789451205545 0.650807149679515 1 0.154245008247676 7.5532790402563 -0.0403787856890236 0.0568073686823933 AT5G54480_at 1.44839539019908 1.31920023477992 2.15538362066445 1.8400057230682 1.45070901288853 1.38342910484662 1.40664114005543 1.61794598160707 1.81048367769805 1.57879277616714 1.52763885838487 1.94392664548972 1.83286274086398 1.76609267906087 1.41526808840783 1.73056052609778 2.09311532585345 1.58902681316047 1.63036824265093 0.183449613734289 0.188211221365415 0.186695062979022 0.183449613734289 0.19014213795398 0.186323634182115 0.183449613734289 0.183657468423150 0.185573339173129 0.186441471096119 0.185453620771576 0.183449613734289 0.189358763231649 0.193008164278284 0.183449613734289 0.190312932840406 0.184887058883693 0.184447302698690 0.187522038402418 5 5 + 22136799 22137326 22137051 22135230 22137392 + gene protein_coding_gene TRUE TRUE AT5G54480.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21740.1); similar to hypothetical protein 25.t00001 [Brassica oleracea] (GB:ABD64964.1); contains InterPro domain Protein of unknown function DUF632; (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630; (InterPro:IPR006868) 0.0420866040269147 0.46571244667002 0.650860504694361 1 0.154209297513966 3.28297695526545 0.0420866040269147 0.0703655943703758 AT5G03290_at 9.74961525519352 9.88654423803418 10.4480744724982 10.7335286700634 10.3986119729630 9.9971414909949 9.50147087401529 9.57188610166508 9.5215685968964 8.98425839689044 9.94627021761709 9.99778583618819 9.87049590053499 9.87356689928894 9.86646183458422 9.96030919437316 9.40547848286829 9.9393932743879 8.81248024100889 0.109419937723870 0.104609219841702 0.114552227013897 0.106146713707923 0.104858668926375 0.112667340516304 0.109527339040434 0.105552173722892 0.110865907128591 0.110551308254178 0.104609219841702 0.104609219841702 0.107891765435474 0.108455795331972 0.108831628645416 0.104627752422982 0.114732964916102 0.111172288945114 0.112458893184614 5 5|0 +|/ 794827 795881 795373.9 793977 796181 + gene protein_coding_gene TRUE TRUE AT5G03290.1 isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative Identical to Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase 5) (NAD(+)-specific ICDH 5) (IDH-V) (IDH5) [Arabidopsis Thaliana] (GB:Q945K7;GB:Q9LZG1); similar to isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT3G09810.1); similar to NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica napus] (GB:AAO61642.1); contains InterPro domain Isocitrate dehydrogenase NAD-dependent, mitochondrial; (InterPro:IPR004434); contains InterPro domain Isocitrate/isopropylmalate dehydrogenase; (InterPro:IPR001804) 0.0448773306319925 0.465088088927376 0.651293186353032 1 0.153919961216079 19.5176454427179 0.0448773306319925 0.0893154043789329 AT5G40160_at 6.24934413089785 6.53292498879155 7.00295020564056 7.14614936196734 8.01353420228746 7.78226243652767 7.01343225484378 6.92453087348099 5.6510410792631 6.54159930209087 7.55701626911582 7.60426498347284 7.46865653228114 7.46192967696686 7.82702762518811 7.42667167318612 7.00087592140134 7.61508078364473 6.25115382737804 0.219302647356624 0.215657187972340 0.214513016004721 0.217195656485745 0.224602142374640 0.224860874036685 0.229444060287792 0.215041013779164 0.258880855580901 0.217263827607071 0.222339261459193 0.214513016004721 0.214605322147260 0.222180760948908 0.214513016004721 0.220501216394861 0.228215388968067 0.221496922397061 0.229740635046593 5 5|0 -|/ 16079961 16080771 16080427.4 16079707 16081577 - gene protein_coding_gene TRUE TRUE AT5G40160.1 EMB506 (EMBRYO DEFECTIVE 506); protein binding Encodes ankyrin repeat protein EMB506. similar to AKRP/EMB2036 (EMBRYO DEFECTIVE 2036), protein binding [Arabidopsis thaliana] (TAIR:AT5G66055.1); similar to Ankyrin [Medicago truncatula] (GB:ABD32433.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.0418457569139505 0.464018632012513 0.652034636069107 1 0.153425222806159 13.9047019748385 0.0418457569139505 0.0697206693426307 AT5G01840_at 3.09063406350586 2.87743653699387 3.50454588163086 3.53316981693078 3.68649850392225 3.63720980594262 3.24316383332672 3.63520787827394 3.12009618268768 3.4556422071749 3.85728638306397 3.98522459765030 3.87672825442425 3.67203952763195 4.16010997239228 3.48624600972913 4.41756265239896 3.78764550797188 3.0068550435852 0.190991351070652 0.194599135020549 0.187807719641033 0.186161208498841 0.186234565905126 0.191693513690792 0.195574617768764 0.184912236348043 0.194406311657855 0.193423725761144 0.192938436455729 0.185313827872049 0.197415378995949 0.193125522581979 0.184912236348043 0.184912236348043 0.192525281603180 0.190731130240345 0.187884704384515 5 5 + 324817 325257 325038.364 324549 325513 + gene protein_coding_gene TRUE TRUE AT5G01840.1 ATOFP1/OFP1 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1); protein binding Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. similar to ATOFP2/OFP2 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT2G30400.1); similar to ovate family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87078.1); similar to Os05g0477200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055838.1); similar to Os05g0324600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055201.1); contains InterPro domain Protein of unknown function DUF623, plant; (InterPro:IPR006458) -0.0429685088607906 -0.463705796673366 0.65225159807822 1 0.153280709044696 6.95075987721941 -0.0429685088607906 0.0778554495751856 AT5G61400_at 2.47982814265120 2.47444657461017 2.28791575996528 2.51038386593913 1.99067345001970 1.97683502471670 1.85017386789690 2.00295624409179 1.96524827635042 1.85197420449134 2.57144192664579 2.50917899766449 2.53250815500868 2.3440774166006 2.44544790759472 2.33742239770534 2.18103899137963 2.73328057666645 2.04352637358867 0.200272637912221 0.194431687695993 0.191906834236777 0.200205575444625 0.207271543936004 0.197553290727403 0.195363290513856 0.194834280051732 0.195472431957257 0.195912671951304 0.191680016771301 0.190158126829233 0.196026847560687 0.194009094952709 0.197171118985770 0.190158126829233 0.196566700044909 0.201826098976962 0.194558107382755 5 5 + 24700167 24700644 24700370.818 24698776 24700740 + gene protein_coding_gene TRUE TRUE AT5G61400.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G02150.1); similar to Os09g0417500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063183.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE84479.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0391135419962744 0.463471698573268 0.652413975206151 1 0.153172628851929 4.40184286505387 0.0391135419962744 0.0467743982490446 AT5G41880_at 2.62405150992728 2.44174553706032 3.28040537625412 3.7354974316939 1.96355257142302 2.31290311479965 3.54851330562242 3.6106330517432 2.23738522342131 2.61631475675145 3.45102697357970 4.97340220364348 2.75966771991701 3.65515816831393 5.02550344008539 2.57353009478034 2.69829043102522 3.57313153360594 2.38671386064924 0.227345390887171 0.229924815221722 0.230033885170916 0.224906249268045 0.233282685555820 0.237938038567553 0.227131322410008 0.229622218239243 0.221224640988398 0.223425534302603 0.224163095828238 0.228637364215471 0.221581075255140 0.231335731279668 0.232090580490263 0.221224640988398 0.230953457821482 0.226896673889996 0.224188472889358 5 5|0 +|/ 16779781 16780919 16780537.222 16778299 16781011 + gene protein_coding_gene TRUE TRUE AT5G41880.1 DNA primase small subunit family similar to PREDICTED: similar to primase, polypeptide 1, 49kDa [Strongylocentrotus purpuratus] (GB:XP_791278.2); contains InterPro domain DNA primase, small subunit, eukaryotic; (InterPro:IPR012192); contains InterPro domain DNA primase, small subunit; (InterPro:IPR002755) 0.0472197556203378 0.462106609346441 0.653361216297661 1 0.152543424872052 5.94075528776192 0.0472197556203378 0.104730090644192 AT5G66280_at 1.90720325952888 1.50020503683438 1.74624705102448 2.10732519300817 1.67703553139684 1.93102201593535 1.83337415428889 1.86252898586417 1.87421418236324 1.75970425056925 1.92622530020459 1.7814892433664 2.14139243085479 1.89988042736233 1.86089624604235 2.07055647155284 2.5261357216892 2.46864503133554 2.23038733411224 0.170621651953955 0.170722405263562 0.173337417997582 0.174057262547218 0.169377531240069 0.173356465309170 0.170406044238691 0.169377531240069 0.179044596463678 0.173628058766922 0.169790194469664 0.17059105716119 0.171050050570046 0.172319981096125 0.172097352858538 0.176428888965247 0.171186649464383 0.172820774377349 0.169377531240069 5 5 + 26494218 26494709 26494430.818 26493392 26494980 + gene protein_coding_gene TRUE TRUE AT5G66280.1 GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1); GDP-mannose 4,6-dehydratase GDP-D-mannose 4,6-dehydratase Identical to GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose dehydratase 1) (GMD 1) (GMD1) [Arabidopsis Thaliana] (GB:Q9SNY3); similar to MUR1 (MURUS 1) [Arabidopsis thaliana] (TAIR:AT3G51160.1); similar to hypothetical protein [Thellun (GB:ABB45857.1); similar to Chain A, Crystal Structure Of The Gdp-Mannose 4,6-Dehydratase Ternary Complex With Nadph And Gdp-Rhamnose. (GB:1N7G); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain GDP-mannose 4,6-dehydratase; (InterPro:IPR006368) -0.0469397390240013 -0.460582633578265 0.654419466950718 1 0.151843085853309 3.8402032525181 -0.0469397390240013 0.104032213296754 AT5G62730_at 0.751131674000759 1.00298606891834 1.36900943560419 0.895708979937177 0.911380673806357 0.941094097403136 1.24906399519234 1.01485356907607 2.84911047233484 1.94284887287457 3.74418992129936 2.89800904966504 1.24886984973045 1.90202609934195 3.2072408096603 2.01423996608886 1.36778097150572 2.50490585694113 1.91471222877907 0.230682404413093 0.227514082790490 0.241314426203791 0.227070012631147 0.229850845778734 0.226026458724054 0.223244831822985 0.228895741819071 0.237005455458725 0.228334343058392 0.240441335187892 0.236790642101949 0.230166956137523 0.235086553176265 0.23979644636399 0.231182216968815 0.223137083214652 0.235522052695271 0.233987025196558 5 5 + 25216685 25217223 25216969.455 25214720 25217259 + gene protein_coding_gene TRUE TRUE AT5G62730.1 proton-dependent oligopeptide transport (POT) family protein similar to nitrate transporter, putative [Arabidopsis thaliana] (TAIR:AT1G27040.1); similar to ATNRT1:2 (NITRATE TRANSPORTER 1:2), calcium ion binding / transporter [Arabidopsis thaliana] (TAIR:AT1G69850.1); similar to putative nitrate transporter [Oryza sativa (japonica cultivar-group)] (GB:BAD86972.1); similar to Os06g0581000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057937.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) -0.0464040764456363 -0.459912153563455 0.654885301773403 1 0.15153567047001 3.31513606517159 -0.0464040764456363 0.101378336122139 AT5G43700_at 7.14851313704896 7.46072389166117 7.80038308838996 7.6450099475692 8.95795921253506 8.40836049392996 7.4628793256603 7.24551294576169 7.35488715500787 7.01547760816478 8.66213021504688 8.79819909045137 8.58270200590612 8.32471058663589 9.01853394011213 8.65800893358104 7.8595059799705 8.15596535899604 7.8510284637097 0.14907010895801 0.145580414625066 0.144310342003179 0.142027161471922 0.144143171715157 0.147552776012288 0.145411262699631 0.140984778133320 0.156860280537806 0.148669107621123 0.145548535220256 0.138764701673441 0.138909680226390 0.144487463896467 0.144379520148674 0.146013702637137 0.152081884821314 0.150457473211046 0.141660516308494 5 5|0 +|/ 17567704 17568362 17567937.889 17567460 17568808 + gene protein_coding_gene TRUE TRUE AT5G43700.1 ATAUX2-11 (indoleacetic acid-induced protein 4); transcription factor Auxin inducible protein similar to transcription factors. Identical to Auxin-responsive protein IAA4 (Indoleacetic acid-induced protein 4) (Auxin-induced protein AUX2-11) (IAA4) [Arabidopsis Thaliana] (GB:P33077); similar to SHY2 (SHORT HYPOCOTYL 2), transcription factor [Arabidopsis thaliana] (TAIR:AT1G04240.1); similar to Gbiaa-Re [Gossypium barbadense] (GB:AAQ74955.1); contains InterPro domain Aux/IAA_ARF_dimerisation; (InterPro:IPR011525); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311) 0.0495774324509002 0.459788416192934 0.654971288643041 1 0.151478983724502 15.723468050052 0.0495774324509002 0.118756770882036 AT5G63340_at 2.25579962548962 2.29387114185933 2.51451834075984 2.86771600709591 2.57017985383440 2.90810001306535 2.48001789078046 2.55943115651961 2.07260681727625 2.76539139066296 2.68893468957761 2.87741141794278 2.62753789490628 2.85239619802113 2.34075599767136 2.43191423223406 2.50555912289122 2.69091430541682 2.51265563368146 0.243650992815701 0.247617255473737 0.244141681020056 0.247801708942498 0.285117936037215 0.252874962609155 0.262030733668051 0.252724060201344 0.246060413875116 0.243646576909797 0.241622011453314 0.241496706064933 0.247422562087276 0.241496706064933 0.242725488458614 0.241496706064933 0.250725282204217 0.243025754905129 0.245140671559933 5 5|0 +|/ 25396121 25396847 25396489.2 25396120 25396900 + gene protein_coding_gene TRUE TRUE AT5G63340.1 unknown protein -0.0437193011199649 -0.458606169942691 0.65579311302824 1 0.150938108223012 5.09477721844534 -0.0437193011199649 0.0859534019457238 AT5G02580_at 1.36708334323481 1.15027492234510 1.15267766089087 1.61291193223700 1.04215442755382 1.24189775123142 0.92872425664012 1.66581047276551 0.857717792256875 0.994281130860883 1.18632009732661 1.02220755667475 1.30300931141516 1.08695634633369 0.98286682366022 1.19402688553198 0.93221331753498 0.827466727959453 1.19429277546768 0.181665855906152 0.177591023542836 0.186426092120837 0.182311973846344 0.181962850161047 0.181206884839391 0.179516641401401 0.189886926425090 0.181471733913012 0.181970841797611 0.184787773002373 0.184813178879945 0.175068235885083 0.180080676780984 0.178029739209459 0.175002571747315 0.180420581433255 0.190864827600889 0.177366027469294 5 5|0 +|/ 579965 580427 580232.222 579850 580785 + gene protein_coding_gene TRUE TRUE AT5G02580.1|AT5G02580.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55240.1); similar to Os03g0280400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049737.1); similar to Os05g0462000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055765.1); similar to Os01g0837600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044739.1); contains InterPro domain Conserved hypothetical protein 1589, plant; (InterPro:IPR006476) -0.0576106802564243 -0.457921654819567 0.656269164263711 1 0.150625553768617 2.31134882061221 -0.0576106802564243 0.158797335908012 AT5G13470_at 4.64280645946103 4.55899881886429 5.40361338406751 5.4982749032975 5.98473197383359 5.81604462523093 4.19536686498667 3.94745750015797 4.17838651501665 3.88293273453461 4.81888893760722 4.5404624400245 4.62265633053324 4.35353643490792 4.88212052837925 4.52347183040173 4.76232047956257 4.16192212168047 4.20877441703335 0.240555075579374 0.242646631952736 0.254368203428437 0.250198648056511 0.251567055714956 0.250344025985243 0.251305801380035 0.239673818563967 0.239255251184966 0.245420792269310 0.238610332180407 0.239624579320246 0.238610332180407 0.239290203286406 0.243517274647490 0.238610332180407 0.245607238332496 0.241076872107320 0.249863890458996 5 5|0 +|/ 4318574 4319688 4319030 4318527 4319927 + gene protein_coding_gene TRUE TRUE AT5G13470.1 similar to Os01g0939400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045348.1) 0.0393974016551897 0.455105860019011 0.658229112842507 1 0.149344548745040 9.34251362127843 0.0393974016551897 0.0563156673135217 AT5G41650_at 1.77009369098843 1.46080404882897 1.78411154894025 2.11277279630302 1.59562909031609 1.41995676910700 1.32560278855146 1.55260315291081 1.18472141337326 0.92091115229525 1.00335837349576 0.99786693191048 1.21601479757822 0.869238368339923 0.86729459821214 1.14240298807988 1.48820257634884 1.05879201275704 0.935576983838929 0.198852519995954 0.201571205397456 0.204184931077492 0.196265672588620 0.19738727168197 0.205115807254720 0.197479022578632 0.201266029280058 0.209817210673162 0.196265672588620 0.196265672588620 0.199968973567853 0.206160153741377 0.201324225893229 0.205805787425278 0.200724035713802 0.203219233510290 0.196265672588620 0.200596003878173 5 5|0 +|/ 16672197 16672770 16672412.6 16672141 16673027 + gene protein_coding_gene TRUE TRUE AT5G41650.1 lactoylglutathione lyase family protein / glyoxalase I family protein similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT1G64185.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE79739.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase; (InterPro:IPR004360) 0.0444240473070773 0.454973984681017 0.658320971592294 1 0.149284739670530 2.67476315941464 0.0444240473070773 0.0925588864281653 AT5G19540_at 10.7812331567773 10.649590404151 11.4079330389522 11.3163120995005 11.5512327186626 11.3488559831012 11.0634486415528 10.7292520350883 10.5141424266280 10.7153593558682 11.2383519969497 10.9806166802705 11.2539120051725 11.3108686118478 11.0959416859971 11.1416765055288 11.2844776305375 11.3276926715219 10.4536568041511 0.0693648079056396 0.0686192146728731 0.0740941914222586 0.071991804012892 0.071608093389032 0.0748369577271873 0.0695070130064394 0.0690071113913712 0.0777625702199243 0.0732959916326155 0.0688647755063445 0.0680468236667193 0.0681255276411804 0.06990192926712 0.0720295499619934 0.0685546871387616 0.0726348401324823 0.0675240195776966 0.0717382609594181 5 5|0 +|/ 6596917 6597652 6597303.1 6595704 6597891 + gene protein_coding_gene TRUE TRUE AT5G19540.1 similar to Os08g0387500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061714.1); similar to unknown [Striga asiatica] (GB:ABE66393.1) 0.0413614513286358 0.453607536681362 0.659273129182455 1 0.148665996557150 21.9886048025702 0.0413614513286358 0.0730872613790382 AT5G49210_at 4.75931022945812 4.80821931204186 5.7268563316076 5.6048025063145 5.46768791368061 5.43862637733501 4.67822115212697 5.27282301760713 4.35495540193133 4.30204274204101 5.56199904788235 5.98938867785478 5.79082271850802 5.46174645507756 5.78541584031475 5.59537371481117 5.33159088216232 5.29007378473826 4.79857949806822 0.181514098085745 0.184130516934324 0.167272679741400 0.173079164298945 0.171603334001336 0.170240130318389 0.175578411530171 0.179973835109392 0.176776706873265 0.172841985676846 0.170556373823152 0.172680865053233 0.167272679741400 0.175699025857955 0.175014944400915 0.170596103035989 0.173723261239228 0.173043147945287 0.170848377798512 5 5 + 19967333 19968661 19967791.364 19966948 19968913 + gene protein_coding_gene TRUE TRUE AT5G49210.1|AT5G49210.2 similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to unknown [Brassica rapa] (GB:ABB97028.1) -0.0464800673254776 -0.453533096798102 0.659325018017005 1 0.148632340602751 10.2625653237792 -0.0464800673254776 0.105504487938751 AT5G54640_at 7.02437679356327 6.95106154115232 7.61489697054434 7.9068558975017 8.39248577369795 8.06166263090382 7.13913259758442 7.36940708184184 8.39899747157843 7.52103908229209 9.16651823087905 9.16785250269932 8.84410046855907 8.86815668311203 9.20616615535786 9.086991596149 7.94312154728745 8.41871500359626 7.94915371413681 0.168564453125222 0.168896482122577 0.170261769728567 0.162894392830059 0.172567518929405 0.167946497780544 0.173133541995592 0.166607406778061 0.170955012435702 0.162894392830059 0.163814616867168 0.170650502186991 0.167950339663177 0.183006886453980 0.170337621816122 0.168926284010688 0.173751324579071 0.166777572593653 0.162894392830059 5 5|0 +|/ 22213768 22214475 22213996.5 22213703 22214718 + gene protein_coding_gene TRUE TRUE AT5G54640.1 RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein. Identical to Histone H2A.6 (Protein RESISTANT TO AGROBACTERIUM TRANSFORMATION 5) (HTA1) (RAT5) [Arabidopsis Thaliana] (GB:Q9LD28); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT4G27230.1); similar to Protein H2A.7 (wcH2A-4) (wcH2A-10) (GB:Q43312); similar to Os08g0427700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061844.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) -0.0433097327882568 -0.452512093524716 0.660036905114567 1 0.148171256644057 15.9545346755774 -0.0433097327882568 0.0870596427879059 AT5G12880_at 1.58881534972594 2.11494903301343 1.89408379549356 2.17843300946372 2.21643335791965 1.67767945115024 1.32188745081480 1.43411636461062 1.81496176835095 2.08964444136539 2.00989379024431 1.91347542980372 1.97702566933537 1.74841274948789 2.01922815602272 1.92160149003570 1.75931134238719 1.69550989347716 1.67884702846888 0.213295780538843 0.211927652134396 0.217459051114467 0.213143182870225 0.212616745922931 0.224618392325423 0.219080064844675 0.215384068977353 0.216285368099134 0.218257070090803 0.219608330757735 0.226101571367480 0.220307591426851 0.212069027180049 0.213734962036449 0.212165701565366 0.223009307910881 0.218720011635554 0.219513188330573 5 5 - 4068717 4068861 4068810.091 4068522 4068965 - gene protein_coding_gene TRUE TRUE AT5G12880.1 proline-rich family protein 0.0530605019641762 0.452121296385155 0.660309479085152 1 0.147995036889254 3.67415392377116 0.0530605019641762 0.140645883979384 AT5G55360_at 1.01850595958405 0.867939877687925 1.57365994784320 1.47534627250123 1.27899607393866 1.32557264255982 1.24760397522091 1.3005756220974 1.35721750607765 1.45254646127295 1.19551126305266 1.08137080252927 1.54875340967757 1.46146971770705 0.851272320248205 1.08038143241895 1.57357942273097 1.49872975460821 1.22952698574344 0.218617613203403 0.218138108169265 0.224203818518372 0.218138108169265 0.218138108169265 0.218286072281962 0.228449072014355 0.232348160612152 0.22347901886809 0.239317501704920 0.22183873949556 0.222346255182900 0.222685950656026 0.218138108169265 0.220493805857372 0.231844021930575 0.228845397481072 0.218138108169265 0.218138108169265 5 5 - 22460964 22461460 22461237 22460950 22461978 - gene protein_coding_gene TRUE TRUE AT5G55360.1 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55350.1); similar to wax synthase isoform 2 [Vitis vinifera] (GB:AAO18665.1) 0.0370507686511136 0.452059868993928 0.660352328289243 1 0.147967351096989 2.57743196296396 0.0370507686511136 0.0334273778597619 AT5G65510_at 0.165876242452169 0.49461941643261 0.130406691087676 -0.234504068508561 -0.123630126403927 0.414278990888089 0.155709615661542 -0.199216365168986 0.253559589362207 -0.0380569923617898 0.401288579280451 -0.101106227679566 0.229108183976227 0.292309256962147 0.466275400034514 0.22641396427641 0.393474853985079 -0.127676856610800 0.152246645145627 0.175751678257605 0.170369068843815 0.172381550804082 0.174118538292295 0.177408418378861 0.175188855935527 0.173047528080614 0.178337186911633 0.170970964008335 0.175771510437239 0.175914138291758 0.176513142115435 0.178128089672815 0.175003994762757 0.188255868913344 0.172111796456573 0.179458852523139 0.182739854661370 0.184773509072961 5 5|0 +|/ 26206036 26206614 26206410.1 26203542 26206639 + gene protein_coding_gene TRUE TRUE AT5G65510.1 AIL7 (AINTEGUMENTA-LIKE 7); DNA binding / transcription factor similar to AIL6 (AINTEGUMENTA-LIKE 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G10510.1); similar to 117M18_31 [Brassica rapa] (GB:AAZ66950.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0529511042646405 -0.451927436275183 0.660444712215534 1 0.147907674941633 0.272989537051779 -0.0529511042646405 0.140222405032646 AT5G02980_at 1.42334332842895 1.09231199594527 1.61326931341975 1.38070383596179 1.01597062111193 1.42592445103697 0.933308067385997 1.62115448587312 1.13680966632515 1.57683601008306 1.29186980656037 1.28836654828402 0.908539866019618 1.23676898046063 1.47420785215813 1.39246561084052 1.70147237749609 1.53865763133668 1.42144187710506 0.205932105071136 0.208675708889793 0.206208804810464 0.209643898937291 0.209368164752610 0.214360819413985 0.212098079169185 0.205932105071136 0.210562511632498 0.209018444220998 0.205932105071136 0.213703877090352 0.218254574562339 0.209302992447613 0.206557770237756 0.213279061115855 0.216998466536694 0.219212083878422 0.210127369760932 5 5 + 698400 698944 698629.545 697991 698998 + gene protein_coding_gene TRUE TRUE AT5G02980.1 kelch repeat-containing F-box family protein similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G03000.1); similar to Cyclin-like F-box; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABE89413.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.0559690494965546 -0.450904623048792 0.661158417838395 1 0.147447345212856 2.67945131338661 -0.0559690494965546 0.155254560358074 AT5G43150_at 9.49930379499318 9.92948275941727 10.6409659050946 10.7488691962824 10.6620846407777 10.7966767316614 10.5891992545275 11.2111532818768 9.79360607272357 10.4324456780838 10.8710050587945 10.8192463245861 11.1376700520217 11.0233405204829 10.0047185034689 11.4935811316532 11.3611777628176 11.0420405246666 10.5029173845915 0.101026614698723 0.097007660449219 0.096192014471581 0.0989190151596202 0.096688406628398 0.101454274824298 0.0982569123411313 0.096192014471581 0.103765730823152 0.0987297928630648 0.0973635265342221 0.0969694884273963 0.0998501296120184 0.0992908114685385 0.099269372080083 0.096192014471581 0.105354833953477 0.100713401938192 0.096192014471581 5 5|0 +|/ 17342324 17342887 17342656.5 17342243 17343151 + gene protein_coding_gene TRUE TRUE AT5G43150.1 similar to hypothetical protein MtrDRAFT_AC141109g4v1 [Medicago truncatula] (GB:ABE79896.1) -0.0513515871386199 -0.448549907224197 0.662802850528052 1 0.146391381349535 21.1157605438844 -0.0513515871386199 0.134230517330359 AT5G06770_at 4.50012492367784 4.33730491306631 5.35096521604217 5.134382315254 6.22573942773428 5.48248617963183 5.59165579996487 4.7252108466696 5.07870018734294 4.28538187491748 5.68261837136948 5.88803678221431 5.37110658067115 5.9796618295141 6.21490664509352 5.6171789697412 5.67503888355568 5.58841153908252 4.09926723276204 0.192801753744937 0.198406371040214 0.201568289649573 0.196081546433057 0.195289188576326 0.21964553695301 0.196084216320693 0.190245894847885 0.199647951328236 0.189402408497695 0.190547254897802 0.189402408497695 0.191642137742445 0.197641858086236 0.196381418432653 0.190106787124742 0.193579835355166 0.190531309749243 0.200146796178694 5 0|5 /|- 2090940 2091478 2091302.8 2090704 2092951 - gene protein_coding_gene TRUE TRUE AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein similar to KH domain-containing protein / zinc finger (CCCH type) family protein [Arabidopsis thaliana] (TAIR:AT3G12130.1); similar to KH domain-containing protein / zinc finger protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD35424.1); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain KH, type 1; (InterPro:IPR004088) 0.0663154427835153 0.448323908629532 0.662960776556363 1 0.146290312225756 10.2884352270031 0.0663154427835153 0.203040454852411 AT5G57980_at 1.30482558248343 0.942473804852543 1.43879741424517 1.2867115229646 1.22090630436600 1.20460026564665 0.872834341674027 1.11413292253479 1.64047814875923 0.96569178507489 1.18974781881932 1.15167438340344 1.29102687425214 1.02506411185707 1.45838034925305 1.33278569382890 1.35002737401679 1.61306230864611 1.25003156298144 0.229093830917083 0.229093830917083 0.230891250442811 0.22974133124415 0.229093830917083 0.234795797891083 0.239111996317175 0.232167543722773 0.243636023788078 0.232166028570508 0.235188276101532 0.229093830917083 0.235932747179331 0.233857386350070 0.232568745859702 0.232311146080210 0.234259509585475 0.240262296913295 0.239284444736104 5 5|0 -|/ 23486282 23486805 23486527.667 23486276 23486994 - gene protein_coding_gene TRUE TRUE AT5G57980.1 eukaryotic rpb5 RNA polymerase subunit family protein similar to ATRPABC24.3 ("Arabidopsis thaliana RNA polymerase I, II and III 24.3 kDa subunit"), DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] (TAIR:AT3G22320.1); similar to OJ991113_30.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD41325.2); contains InterPro domain RNA polymerase subunit, RPB5/RPB6-like; (InterPro:IPR009026); contains InterPro domain RNA polymerase subunit, RPB5; (InterPro:IPR000783); contains InterPro domain RNA polymerase Rpb5, N-terminal; (InterPro:IPR005571) 0.0415965761693129 0.445819088425916 0.664712274554937 1 0.145173403546253 2.46659607644496 0.0415965761693129 0.079853021602656 AT5G38760_at 1.78124770889696 1.04383153196367 1.76815770248101 1.82779089651863 1.22756836350176 1.78933831748103 1.20339785256513 1.16321770483323 2.08084475329034 1.71444879177567 1.99761277490774 1.70390997266153 1.63122440840218 1.70850393447020 1.63008146482154 1.83106545624950 1.36331089862945 1.76897953898806 1.35851060584821 0.214668831402475 0.214041900792099 0.211992268524513 0.220035704784332 0.220016233842279 0.213940170383301 0.214858761048251 0.228663272092808 0.216058324112599 0.218500840788767 0.215106187166169 0.216277568352978 0.215900532649386 0.214811193213775 0.214526050536347 0.212849345068056 0.225137669920316 0.220870239989020 0.214906136715010 5 5|0 +|/ 15541486 15541949 15541726.125 15541408 15542207 + gene protein_coding_gene TRUE TRUE AT5G38760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53820.1); similar to pollen coat protein homolog [Brassica rapa] (GB:AAC98699.1); contains InterPro domain Late embryogenesis abundant protein; (InterPro:IPR004238) 0.056490843362789 0.445446617441273 0.664972905043889 1 0.145007830638295 3.18670414633652 0.056490843362789 0.160907214828031 AT5G64470_at 4.82078196987143 4.65637821133494 5.73808035378177 5.63997767195964 6.11337630651588 6.19669840443379 5.04391432415523 4.53660485439284 4.11228562876763 4.18766286573152 5.04119125348452 5.1905190129282 5.49313632688236 4.51529131206165 4.62663234553041 5.55392981623435 4.86826060938742 4.99008750110341 4.45484234720423 0.220761577716293 0.224067809487432 0.218966406195725 0.220402136135917 0.225677129673275 0.230286195654181 0.226313353898407 0.220961221716564 0.224221155436218 0.226851036906503 0.221091442610191 0.222115704506738 0.230135897862248 0.231357288024980 0.225907408989376 0.220508793845808 0.226606645251146 0.221864653915844 0.224102834863545 5 5 + 25794125 25794906 25794559.182 25793251 25795189 + gene protein_coding_gene TRUE TRUE AT5G64470.1|AT5G64470.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G14530.1); similar to Os02g0117900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045691.1); similar to Protein of unknown function DUF231, plant [Medicago truncatula] (GB:ABE84785.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) 0.0438422755946909 0.445097789754008 0.665217033654367 1 0.144852888325751 9.98646549677369 0.0438422755946909 0.0949371958562574 AT5G09390_at 6.40202000116302 6.34884611586322 7.09150694476201 7.03489737077181 7.72802650303855 7.37144853640596 5.98299163950965 6.00585297448489 5.67594460285575 5.90593701255675 7.3279077534784 7.12881821187877 6.67890211940704 7.267848733995 6.37059937773686 7.00616606194013 6.74054801211856 6.49855622715396 6.37619380529345 0.189199128419159 0.183481409251778 0.188130348500513 0.189198683793247 0.183481409251778 0.189277422091839 0.193328653256357 0.191186445991025 0.196278055041571 0.194015341448096 0.193232082639918 0.187603991317385 0.188177704643739 0.191958211683147 0.189114013317433 0.183481409251778 0.195769967206437 0.199880412404982 0.195017887183137 5 5|0 +|/ 2914602 2915769 2915246.111 2913535 2915924 + gene protein_coding_gene TRUE TRUE AT5G09390.1|AT5G09390.2 CD2-binding protein-related similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G54230.1); similar to AT5g09390/T5E8_190-related [Medicago truncatula] (GB:ABE93561.1); contains domain FAMILY NOT NAMED (PTHR13138); contains domain SUBFAMILY NOT NAMED (PTHR13138:SF4) -0.0392543881196052 -0.44422014645499 0.665831436311497 1 0.144463572416569 13.1774204869743 -0.0392543881196052 0.0632780697349829 AT5G25290_at 1.26580219004528 1.50599912854945 1.36542028647498 1.58601622493223 1.03707305414849 1.49552693084014 1.25672161051931 1.55043515991529 1.75797400810301 1.46436540781457 1.56506728444330 1.64291311106865 1.78885727057027 1.16594596437775 1.66522272255648 1.58916367153616 2.29911192020374 1.79565684541000 1.42136186860476 0.226321946671602 0.23994085728848 0.237680724618026 0.237873534154218 0.230107381608391 0.239706527954756 0.226574151671007 0.240092665279225 0.2301060852344 0.226321946671602 0.228374079914485 0.228926483001218 0.233361339978833 0.2353311466989 0.226321946671602 0.233638529565618 0.240293818390354 0.238813713581477 0.230659219348658 5 5 + 8779197 8779740 8779495.909 8778595 8779788 + gene protein_coding_gene TRUE TRUE AT5G25290.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G27540.2); similar to Os11g0593100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068199.1); similar to hAT family dimerisation domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94469.1); similar to F-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94496.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) -0.046211071126675 -0.443530657663442 0.666314300170086 1 0.144158238248599 3.0013207116506 -0.046211071126675 0.109832430960835 AT5G52200_at 7.87468419288079 7.7913856112279 8.5570296328003 8.67624639202987 8.72796085354224 8.66189166242398 7.58290053551864 7.4809037645614 7.57868049350379 7.46109801758902 8.33139303005855 8.3447508451102 8.11106880831252 8.3398995566045 8.30484141157746 8.0790996290668 8.31738555148519 8.27534084828052 7.40469969683082 0.167506154539086 0.172697604638463 0.169188847767836 0.174655594383047 0.164290790977392 0.166872999199017 0.169832672622242 0.178579789424404 0.198228549733258 0.173793080479116 0.17181053652431 0.171237682598162 0.164290790977392 0.164290790977392 0.176662653717607 0.167887515201618 0.1724655300538 0.176689274597229 0.168944639114704 5 0|5 /|- 21220046 21220945 21220372.75 21219865 21221985 - gene protein_coding_gene TRUE TRUE AT5G52200.1 phosphatase inhibitor/ protein phosphatase inhibitor similar to Os05g0301600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055135.1); similar to hypothetical protein MBP_81C12.14 [Musa balbisiana] (GB:ABF70088.1); contains InterPro domain Protein phosphatase inhibitor 2 (IPP-2); (InterPro:IPR007062) -0.0363088487503187 -0.443527964740816 0.66631618639307 1 0.144157046604455 16.0413579286414 -0.0363088487503187 0.0327982048187616 AT5G66060_at 5.84147765609264 5.89813116980976 6.04690683545913 6.28247833451166 6.96814805659741 6.36927246866005 5.66396153396227 5.86046682219234 4.78158266852288 5.16792890796709 6.69263487637651 7.15174886109101 5.9300074024615 6.72844954299078 6.9087439082983 6.10322055668583 5.56660677255608 5.60781034037668 5.02066590708461 0.219522143811244 0.201303079817456 0.209824035223109 0.207561895741343 0.202820858325549 0.226915855413085 0.203868226576879 0.207243045449305 0.232320809932681 0.204683945498492 0.206243444030053 0.201079636544563 0.205287973008731 0.216119553616293 0.201200791639249 0.201079636544563 0.21357247531836 0.207955301812384 0.202041827141136 5 5|0 +|/ 26437041 26438123 26437776.8 26436707 26438156 + gene protein_coding_gene TRUE TRUE AT5G66060.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT2G17720.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABE81866.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.0470966580214234 -0.439996511158506 0.668791826566772 1 0.14260032879872 11.7794613315587 -0.0470966580214234 0.116856095552088 AT5G40150_at 2.37829930554498 2.75068377218914 2.35277855478722 2.54669432845009 2.70227207847902 2.95081534616372 3.02229766398063 4.02723731108158 2.94079937912811 2.94980919877042 4.75574585451752 5.79906304135912 4.31981391996171 5.18281091158855 5.04248428418217 4.73043701591646 3.80789969364182 4.09777097145292 3.35213436959611 0.242962276068230 0.2414243793257 0.249963669524705 0.245502433297829 0.248768300284776 0.246638356757525 0.244701774212045 0.247463787879361 0.247890639059966 0.243127581752008 0.245225563891583 0.249296789995879 0.246690619527326 0.240068358020755 0.248482345172524 0.240068358020755 0.247956397064475 0.252939759030697 0.240068358020755 5 5 - 16077023 16077482 16077262.909 16076737 16078271 - gene protein_coding_gene TRUE TRUE AT5G40150.1 peroxidase, putative Identical to Peroxidase 63 precursor (EC 1.11.1.7) (Atperox P63) (ATP26a) (PER63) [Arabidopsis Thaliana] (GB:Q9FL16;GB:P93726); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT3G28200.1); similar to Haem peroxidase, plant/fungal/bacterial [Medicago truncatula] (GB:ABE90190.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.0627672307286455 0.439203077798884 0.669348614044409 1 0.142252217457420 6.74034355878908 0.0627672307286455 0.193322351549739 AT5G39970_at 1.45204910305397 1.17772382165954 0.907718605763808 1.12517363368727 0.977703626332164 1.29861925938421 0.714621645772152 0.691134668043206 1.45751294340785 1.01063797303093 1.31994654008799 1.25501851090229 1.16269003833332 1.14311190720462 1.31810322141257 0.819613552894597 1.24194847705485 1.34118377660650 1.14527609101432 0.231286506950813 0.226756136684297 0.226415293986201 0.229967062294329 0.227377759082571 0.225054121419468 0.225464495588977 0.225740082000826 0.225758498010954 0.227766864667662 0.228743960825364 0.229353892466306 0.235570186095143 0.234299903052328 0.226583241768209 0.231111176267044 0.239617356903128 0.233391952481476 0.231141057149806 5 0|5 /|+ 16017565 16017866 16017717.444 16015253 16018041 + gene protein_coding_gene TRUE TRUE AT5G39970.1 similar to HIPL2 (HIPL2 PROTEIN PRECURSOR) [Arabidopsis thaliana] (TAIR:AT5G62630.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74790.1); similar to hypothetical protien [Hordeum vulgare subsp. vulgare] (GB:AAV49993.1); similar to glucose/sorbosone dehydrogenases-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30151.1); similar to unnamed protein product [Triticum tur (GB:CAJ13560.1); contains InterPro domain Soluble quinoprotein glucose dehydrogenase; (InterPro:IPR011041) -0.0412994464691792 -0.438894831599318 0.669564980390979 1 0.142117140327610 2.24543188156860 -0.0412994464691792 0.0822837222643473 AT5G23000_at 0.599904312209629 0.90630536071533 0.597458937822979 0.622566262571647 0.595111895801138 0.507711565730673 0.249364839059101 0.6565997186373 0.693683468977721 1.10837463988503 0.953541752561104 1.02657955865564 0.97890236015155 1.13061519128897 1.08069913678068 1.11273526163870 0.647880237911653 1.09070818323481 1.05873683722316 0.227829354544115 0.226601229015572 0.226220965203731 0.225906264080821 0.233914284421768 0.225664620317531 0.232375084675983 0.222803972460585 0.234037622152963 0.228677336489734 0.227338739567595 0.232133150899699 0.232089226048658 0.230806071736073 0.22691154328121 0.225753953905251 0.230341617361436 0.231453546989498 0.222803972460585 5 5 + 7697118 7697686 7697390.182 7696138 7697930 + gene protein_coding_gene TRUE TRUE AT5G23000.1 ATMYB37/MYB37/RAX1 (myb domain protein 37); DNA binding / transcription factor Putative homolog of the Blind gene in tomato. Together with RAX2 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB37, regulates axillary meristem formation. RAX1 is expressed in a small central domain within the boundary zone separating SAM and leaf primordia during early leaf primordium development and is currently the earliest spatial marker for future axillary meristems. Member of the R2R3 factor gene family. similar to ATMYB38/MYB38/RAX2 (myb domain protein 38), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G36890.1); similar to MYB24 [Malus x domestica] (GB:AAZ20440.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0423762194399363 -0.438735659645807 0.669676719812339 1 0.142047425001681 1.57003087438840 -0.0423762194399363 0.0895866814138924 AT5G06040_at 0.775287903708356 1.02984719604742 0.95196903463017 0.773880140826697 0.946351992854223 1.07425551356290 0.51865843188874 0.806240715022822 0.778432864982209 0.972521751431928 0.84914879019636 1.00277654982698 1.01533040456582 0.723809006839491 1.04997738411505 0.79238405085764 0.861016485687881 1.07634724227841 0.874338984243888 0.183011158913173 0.176594734333444 0.177144602462348 0.177763668831649 0.176344319987462 0.182267882888045 0.176344319987462 0.180927269124462 0.186031415194711 0.183789702418452 0.191470251678283 0.187450317982537 0.183419755907492 0.183735119085659 0.190205912174768 0.182842510414528 0.188568964691307 0.187775873367422 0.179256082499737 5 5|0 +|/ 1815135 1816014 1815531.8 1815129 1816038 + gene protein_coding_gene TRUE TRUE AT5G06040.1 self-incompatibility protein-related similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT5G06030.1); contains InterPro domain Plant self-incompatibility S1; (InterPro:IPR010264) 0.0404370801905696 0.438363065438225 0.669938315404166 1 0.141884328492457 1.75778466915865 0.0404370801905696 0.0765322325773635 AT5G39820_at 1.69017400396142 1.06087387245932 1.36141081937183 1.46975003412111 1.22005488597424 1.73161546102539 1.28619289417130 1.54013872648748 1.16304520087006 1.46434508429135 0.904330248481236 1.27584036550544 1.45568999325727 1.18468544030728 1.33115753719826 1.37431267616391 1.39005334600009 1.46239449966240 1.19235581104799 0.193683403915818 0.187374514027998 0.191799491386961 0.191933166013257 0.196743453463651 0.187374514027998 0.190262260095836 0.187531414115342 0.190022353756915 0.19283734433012 0.193576191180093 0.192349789777686 0.191648448603731 0.198933012628116 0.196608998454547 0.194934012451850 0.198706320733299 0.187374514027998 0.201244356138915 5 5|0 -|/ 15956539 15957148 15956795.7 15956528 15957719 - gene protein_coding_gene TRUE TRUE AT5G39820.1 ANAC094 (Arabidopsis NAC domain containing protein 94); transcription factor Identical to Putative NAC domain-containing protein 94 (ANAC094) [Arabidopsis Thaliana] (GB:Q9FIW5); similar to ANAC009 (Arabidopsis NAC domain containing protein 9), transcription factor [Arabidopsis thaliana] (TAIR:AT1G26870.1); similar to Putative NAC domain-containing protein 9 (ANAC009) (GB:Q9ZVH0); similar to Os02g0745300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048109.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.0529425590102243 -0.438090885972193 0.670129439596286 1 0.141765270992619 2.70530469322574 -0.0529425590102243 0.148256320213546 AT5G53340_at 5.91413351205332 5.96086418854305 7.41225053660567 7.00088976213948 7.35590476044418 7.18586654414112 6.96515212522269 6.63308937864939 6.09274035300454 6.30612810454972 7.55350280562222 7.58436403940058 7.51209807810134 7.06657756844978 7.48535651208133 7.28546664523273 6.87870930868397 7.15465714140844 6.16706810760735 0.196398007030221 0.173190832763159 0.177518310575395 0.178180536676929 0.175529279214743 0.180679140701192 0.175453992051238 0.181159865729985 0.202047035339567 0.185203758995945 0.179711509589853 0.175770296655784 0.178830276234891 0.184002607802603 0.173735872767919 0.175433597700761 0.191955248298047 0.173217293095889 0.182563235954065 5 5|0 -|/ 21658407 21659209 21658776.125 21658039 21660788 - gene protein_coding_gene TRUE TRUE AT5G53340.1|AT5G53340.2 galactosyltransferase family protein|transferase, transferring hexosyl groups similar to transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT2G25300.1); similar to beta 1,3-glycosyltransferase-like protein I [Solanum lycopersicum] (GB:CAD30015.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) -0.0432626639427041 -0.436768315390396 0.67105849611109 1 0.141187761053956 13.5553873680214 -0.0432626639427041 0.096442869718986 AT5G51820_at 9.65102227021853 9.48242501000906 9.74681564835621 9.60397479906327 9.96178518614742 9.59599044726516 9.58507314059685 9.41727895131104 8.70259085478643 9.2924954331377 9.97854719258987 10.1384289508010 10.0126316080403 10.1308217104184 10.2564154156700 9.95261456216797 10.1397979336310 9.91964068415948 8.76908442247591 0.105737429736456 0.105461219142261 0.106016910160483 0.114145497998638 0.107769497263870 0.107062799815021 0.101542716346104 0.112370105371567 0.118565445948489 0.107869518410244 0.104095048091640 0.101301498360739 0.104476518123450 0.11106194902847 0.109692078910087 0.103724224924104 0.107380612666954 0.101542795221757 0.109303053822597 5 5|0 -|/ 21080757 21082189 21081347.125 21080594 21085283 - gene protein_coding_gene TRUE TRUE AT5G51820.1 PGM (PHOSPHOGLUCOMUTASE) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts. Identical to Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) (PGMP) [Arabidopsis Thaliana] (GB:Q9SCY0); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G23190.1); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70730.1); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SM59); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9M4G5); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SMM0); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; (InterPro:IPR005845); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; (InterPro:IPR005844); contains InterPro domain Phosphoglucomutase/phosphomannomutase C terminal; (InterPro:IPR005843); contains InterPro domain Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; (InterPro:IPR005846); contains InterPro domain Phosphoglucomutase/phosphomannomutase; (InterPro:IPR005841) -0.0405980941079847 -0.435721742995125 0.671794083328883 1 0.140731958327874 19.1242969286133 -0.0405980941079847 0.0794524899193256 AT5G66680_at 9.71365055358719 9.85282493251502 10.0736462798814 10.2913034449809 10.3003570013287 9.95959981553644 9.4025424897637 9.35902619022206 9.1613096794947 9.02842272299285 9.79981328088972 10.0653068473095 9.60041727241734 9.65101421693674 9.96517807298316 9.61061182931336 9.56179273947002 9.90581089927966 8.86823726155672 0.103814643309249 0.0992465282666593 0.111528954017221 0.104537602715090 0.101089952495355 0.107833967388518 0.108108437463066 0.0995100226252792 0.120432093177448 0.108516336049346 0.103755981916389 0.102520425012359 0.101208796703680 0.107597235628983 0.101774915403108 0.101919598765980 0.111435991040729 0.102495293254023 0.108443097513361 5 5|0 -|/ 26635243 26636437 26635689.875 26634770 26637893 - gene protein_coding_gene TRUE TRUE AT5G66680.1 DGL1 (defective glycosylation 1); dolichyl-diphosphooligosaccharide-protein glycotransferase Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins. similar to MGC80921 protein [Xenopus laevis] (GB:AAH73434.1); similar to Os07g0209000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059165.1); contains InterPro domain Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit; (InterPro:IPR005013) -0.0398192786426737 -0.434808464387938 0.672436279308552 1 0.140335067387962 19.2637770215634 -0.0398192786426737 0.0743839750981063 AT5G47350_at 0.930696900416504 0.643948591328557 1.27042001100949 1.29954281676287 0.888871077270003 0.902974487791327 0.881740692068075 1.05426443346719 1.1729518694272 0.797755391651835 0.748705736129962 0.657387673225449 1.0713459536669 0.900203946494915 1.16225006309379 0.914829075095983 0.954080234612226 0.924258245511392 1.25216032031983 0.205754814579899 0.202234909178390 0.203772791158795 0.205239467740439 0.202234909178390 0.203724249379668 0.208346536219005 0.203414637909036 0.213421379335404 0.212201863937746 0.222824697949958 0.205336913770123 0.213149834550677 0.214704057763279 0.202234909178390 0.204620479062130 0.217355819769408 0.215216214284008 0.205430244988078 5 0|5 /|+ 19230806 19231471 19231248.875 19229916 19231680 + gene protein_coding_gene TRUE TRUE AT5G47350.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47330.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) -0.0377919826009130 -0.434225860986655 0.672846095601663 1 0.140082299375431 1.97951828115348 -0.0377919826009130 0.0581824290288545 AT5G56780_at 2.85489889290225 2.45851112841928 2.56339714378149 2.64500242837489 3.37217763802569 3.17586810937778 2.77051007891075 2.55679187111010 3.09663150452727 2.39707561336306 3.79864974212394 3.67335561506790 3.22343656968322 3.54248484340967 3.77753640525590 3.43419471384386 2.63427421521149 3.00291978844594 2.77896866475977 0.241785919775393 0.240604592221175 0.242604251394088 0.236936937641139 0.240615595725117 0.254541270916163 0.237492858570801 0.238226089600319 0.248056911206064 0.235389384454797 0.239117734224315 0.23668251232667 0.234244309588631 0.244305298875280 0.234479228824635 0.240593089633488 0.244357094161776 0.235768030433998 0.233199009403679 5 5 - 22981726 22982127 22981934.909 22981491 22983467 - gene protein_coding_gene TRUE TRUE AT5G56780.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56770.1); similar to transcripteion factor [Vicia faba var. minor] (GB:CAA66483.1) 0.0413755229361478 0.433669128340345 0.673237818013086 1 0.139841060434101 5.87135220178625 0.0413755229361478 0.0861797605816549 AT5G42120_at 1.23049081787233 0.922874647286988 1.65695758461896 1.41448062901865 1.13612138626394 1.02756075899657 1.33851178218920 1.14949950336264 1.56367538602047 1.49873738119593 2.06261732553055 1.25499993728839 1.56654133695407 1.36877108509525 1.5410981160703 1.58237801544464 1.25398996609047 1.29898016122440 1.08116558019244 0.170677110926530 0.169497251841586 0.165323559929859 0.170502719378247 0.172330992089917 0.165323559929859 0.169706003962063 0.174992960786179 0.165323559929859 0.170487539730578 0.173190206739488 0.178049342398066 0.168406310919889 0.168868618628855 0.184462778438049 0.172526655405569 0.169523507846285 0.18509716507686 0.174012287352065 5 5 - 16850316 16850863 16850620.182 16850301 16852376 - gene protein_coding_gene TRUE TRUE AT5G42120.1 lectin protein kinase family protein similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55830.1); similar to Os06g0285400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057404.1); similar to lectin-like receptor kinase 7;1 [Medicago truncatula] (GB:AAR11298.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220) 0.0400532078302385 0.432663102530129 0.67394592530108 1 0.139405892978550 2.67074452641710 0.0400532078302385 0.0775728670892064 AT5G16750_at 3.40462746422919 3.44695048691679 3.77086727113848 4.29178628354895 3.75428958973317 4.00297065573489 2.69330970684727 3.6375066087156 2.73293751137029 3.32015036101333 4.02907064380727 3.93224669650838 3.38625432407387 3.18795772205090 4.04714699284602 3.65741402713243 3.23218572631765 2.93025789230576 3.39207785569879 0.210821460412776 0.213347203608437 0.222474820819925 0.213619269772668 0.214218208202473 0.218404163287212 0.211627715259195 0.208833498569676 0.219738646935132 0.211430825513466 0.211037606902963 0.212525457337247 0.213480245212836 0.213470487614649 0.208047467323934 0.212117610909826 0.217558004307025 0.216556868456488 0.208047467323934 5 5 - 5504566 5505252 5504905.727 5504349 5509346 - gene protein_coding_gene TRUE TRUE AT5G16750.1 TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding mutant has Female gametophyte; WD-40 Repeat Protein similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G21540.1); similar to Os04g0592700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053718.1); similar to transducin (beta)-like 3 [Xenopus tropicalis] (GB:NP_001017314.1); similar to transducin (beta)-like 3 [Xenopus tropicalis] (GB:CAJ83373.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043) -0.061337710899123 -0.431775297047317 0.674571096754449 1 0.139022671272243 6.97464117293692 -0.061337710899123 0.191653482710024 AT5G47990_at 1.66509339611151 1.55969064530356 1.90982487462343 1.90138242223137 1.50403317199627 1.70633563380867 1.42520443893441 1.72981074500446 1.60049069652409 1.98053861178750 1.42405931620724 1.60107684922754 2.14031544014912 2.18558352487027 1.74310419722067 1.68976232063337 2.00431536839038 2.41569265633175 2.00985877627102 0.194321944965599 0.202834133424831 0.196917903764027 0.206124108578709 0.198434794536088 0.201595369288501 0.195724689716537 0.203185567574422 0.205578899744530 0.210251267555051 0.198456282891394 0.194321944965599 0.198987306730864 0.199675205189819 0.198604081794812 0.196138293232957 0.201734263890044 0.194321944965599 0.199051311369799 5 5 + 19453079 19453604 19453361.727 19452053 19453915 + gene protein_coding_gene TRUE TRUE AT5G47990.1 CYP705A5 (cytochrome P450, family 705, subfamily A, polypeptide 5); oxygen binding member of CYP705A similar to CYP705A2 (cytochrome P450, family 705, subfamily A, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G15350.1); similar to CYP705A30 (cytochrome P450, family 705, subfamily A, polypeptide 30), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G20940.1); similar to CYP705A32 (cytochrome P450, family 705, subfamily A, polypeptide 32), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G20950.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE94646.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0384185045139136 -0.431276581715039 0.67492239331359 1 0.138807733010323 3.55723095132988 -0.0384185045139136 0.065872775900995 AT5G18940_at 6.84537890306538 7.55510213856736 8.12409860412242 8.11575134346393 8.9129176885977 8.32819181511849 7.8039777272092 7.80168576068456 7.26356909293343 6.71095826929469 8.11132489494014 8.3963922633691 8.24558676044531 8.34741960361141 7.61548999379608 8.24761658203842 8.28133844649347 8.0273630302228 7.0826476547705 0.223766262385220 0.196022874834314 0.214015435125750 0.207689467822344 0.208109173257007 0.207766799329339 0.196078779520328 0.198695142622072 0.210564581171575 0.204420803975614 0.196305357905631 0.205586747622504 0.197866192411502 0.208523409081217 0.202289444712723 0.198414507906879 0.210841882175649 0.198826898839569 0.212447610804559 5 5|0 +|/ 6326947 6328072 6327511.556 6325788 6328356 + gene protein_coding_gene TRUE TRUE AT5G18940.1|AT5G18940.2 Mo25 family protein similar to Mo25 family protein [Arabidopsis thaliana] (TAIR:AT5G47540.1); similar to PREDICTED: similar to Calcium binding protein 39 (Mo25 protein) isoform 1 [Canis familiaris] (GB:XP_534599.2); similar to calcium binding protein 39 [Danio rerio] (GB:NP_998666.1); similar to Os07g0647100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060466.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989)|similar to Mo25 family protein [Arabidopsis thaliana] (TAIR:AT5G47540.1); similar to calcium binding protein 39 [Danio rerio] (GB:NP_998666.1); similar to Os07g0647100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060466.1); similar to Os03g0359700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050152.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) 0.0543007050454707 0.431046519325077 0.675084477343915 1 0.138708660459345 15.5249503905357 0.0543007050454707 0.159143156547796 AT5G66230_at 2.32234646090664 2.08252333218270 2.28686046278793 1.94935713473521 2.02211210601945 1.97237206767207 2.13492689107921 2.03072375802474 1.83792169643997 1.9743605050648 2.22175410363889 2.50551175098479 2.43840846217691 2.22962533152118 2.63069018977045 1.89859946598421 2.03675299474098 2.27224425554465 1.89317355889656 0.202432279575015 0.205180729519394 0.206028438462545 0.210079643292027 0.210251794383814 0.202432279575015 0.210858583486933 0.209866399932425 0.219870507457912 0.205458007128568 0.208710158494484 0.213113816882153 0.204625244765689 0.205788000971532 0.205122761194376 0.202961993149182 0.221452625811610 0.221151676261241 0.207916260622613 5 5 + 26480432 26481067 26480682.364 26479811 26481357 + gene protein_coding_gene TRUE TRUE AT5G66230.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51230.1); similar to Sugar transporter superfamily [Medicago truncatula] (GB:ABE81092.1) -0.0394267688726432 -0.430521646289072 0.675454326688008 1 0.138482823164393 4.19066122972384 -0.0394267688726432 0.0743845219659901 AT5G49430_at 4.28029750331923 4.38043766701717 4.85471504854309 4.66295963665720 5.10906894151271 4.41044542032231 3.91479248418144 3.66649655218284 4.05462022070944 3.79324755233872 4.98331539495306 5.11612984415388 4.86039696653564 4.5880363900409 5.07540832336251 5.3369494438359 4.87389562861587 4.85067009589676 4.38472371984853 0.2055484273487 0.206845322825106 0.213440012129641 0.209969486390627 0.209017177978039 0.213612795375101 0.200594170546718 0.213734940486470 0.210237318468869 0.203512676982196 0.202881560658738 0.204789007564486 0.200594170546718 0.200594170546718 0.204144982461540 0.203362188591081 0.204811589235889 0.206818654122143 0.200594170546718 5 5|0 -|/ 20054580 20055271 20055020.556 20054564 20062680 - gene protein_coding_gene TRUE TRUE AT5G49430.1 transducin family protein / WD-40 repeat family protein similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT2G47410.1); similar to Os03g0306200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049887.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF95528.1); similar to Bromodomain; WD40-like [Medicago truncatula] (GB:ABD32322.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Bromodomain; (InterPro:IPR001487) -0.0490031217042193 -0.42898511265717 0.676537554515273 1 0.137823221964482 8.92896703599527 -0.0490031217042193 0.133658698127333 AT5G65110_at 8.99159401248773 9.0316978694435 9.94281651435952 10.0107173741381 10.0084682192293 9.73187098800694 8.85248211344205 8.92366146468102 9.09991473578366 8.9234660665706 9.2958680349003 9.49936773370074 9.4674875213582 9.51430572145247 9.23699524717412 9.7541623311262 9.60450718164765 9.44176936691868 8.6906654874904 0.111716828399812 0.107807017025504 0.117728119788767 0.107154364138824 0.106206247427135 0.117333428542558 0.108296178780633 0.108902913495012 0.120332185679554 0.118074237185005 0.106946500719819 0.107287466657726 0.107768990753306 0.116119032527037 0.106881319469353 0.106574476042786 0.107083514370920 0.113831391615829 0.115437312280572 5 5|0 -|/ 26027071 26027822 26027367.111 26026861 26029745 - gene protein_coding_gene TRUE TRUE AT5G65110.1|AT5G65110.2 ACX2 (ACYL-COA OXIDASE 2); acyl-CoA oxidase Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. Identical to Acyl-coenzyme A oxidase 2, peroxisomal precursor (EC 1.3.3.6) (AOX 2) (Long-chain acyl-CoA oxidase) (AtCX2) (ACX2) [Arabidopsis Thaliana] (GB:O65201;GB:Q9FJQ4); similar to ACX6 (ACYL-COA OXIDASE 6), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06310.1); similar to ACX3 (ACYL-COA OXIDASE 3), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06290.1); similar to Acyl-coenzyme A oxidase, peroxisomal precursor (AOX) (Long-chain acyl-CoA oxidase) (GB:O64894); similar to acyl-CoA oxidase homolog [Phalaenopsis sp. 'True Lady'] (GB:AAB67883.1); similar to acyl-CoA oxidase [Petroselinum crispum] (GB:AAF14635.1); contains InterPro domain Acyl-CoA oxidase, C-terminal; (InterPro:IPR002655); contains InterPro domain Acyl-CoA oxidase; (InterPro:IPR012258); contains InterPro domain Acyl-CoA dehydrogenase, middle and N-terminal; (InterPro:IPR009100); contains InterPro domain Acyl-CoA dehydrogenase, central region; (InterPro:IPR006091); contains InterPro domain Acyl-CoA dehydrogenase, type 1; (InterPro:IPR006090); contains InterPro domain Acyl-CoA dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764)|Identical to Acyl-coenzyme A oxidase 2, peroxisomal precursor (EC 1.3.3.6) (AOX 2) (Long-chain acyl-CoA oxidase) (AtCX2) (ACX2) [Arabidopsis Thaliana] (GB:O65201;GB:Q9FJQ4); similar to ACX6 (ACYL-COA OXIDASE 6), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT1G06310.1); similar to Acyl-coenzyme A oxidase, peroxisomal precursor (AOX) (Long-chain acyl-CoA oxidase) (GB:O64894); similar to acyl-CoA oxidase [Phalaenopsis cv. 'True Lady'] (GB:AAR00586.1); similar to acyl-CoA oxidase [Petroselinum crispum] (GB:AAF14635.1); contains InterPro domain Acyl-CoA oxidase, C-terminal; (InterPro:IPR002655); contains InterPro domain Acyl-CoA oxidase; (InterPro:IPR012258); contains InterPro domain Acyl-CoA dehydrogenase, middle and N-terminal; (InterPro:IPR009100); contains InterPro domain Acyl-CoA dehydrogenase C-terminal-like; (InterPro:IPR009075); contains InterPro domain Acyl-CoA dehydrogenase, central region; (InterPro:IPR006091); contains InterPro domain Acyl-CoA dehydrogenase, type 1; (InterPro:IPR006090); contains InterPro domain Acyl-CoA dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764) 0.0365152740626042 0.427703216911589 0.677441855368455 1 0.137274669836571 18.6274085639234 0.0365152740626042 0.0512754206857596 AT5G07520_at 1.71026153528097 1.96846202753381 2.33389451146455 1.65107610621648 1.73578996620818 1.82919018513413 1.57189303225496 1.78148236896362 1.89869893904327 1.74901851223547 2.09911493093477 2.09076088278622 1.68431838125293 1.89393303934352 2.07107813446666 1.80034993207107 1.68691923149591 2.03270421719727 1.90768492483041 0.181801095864928 0.182150310889490 0.180911227139160 0.183770884094097 0.180318059276766 0.182383688902037 0.184573388389668 0.186863432199961 0.184621517542997 0.183312552849922 0.182053123829196 0.181109757009860 0.181992941410172 0.180551492160033 0.189666746799479 0.189596593357779 0.184584219932217 0.191961467532885 0.188663677890266 5 5|0 -|/ 2380222 2381084 2380585.1 2380136 2381318 - gene protein_coding_gene TRUE TRUE AT5G07520.1 GRP18 (Glycine rich protein 18); nutrient reservoir encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). similar to GRP14 (Glycine rich protein 14), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G07510.1); similar to pollen coat oleosin-glycine rich protein [Capsella rubella] (GB:AAR15459.1); contains InterPro domain Oleosin; (InterPro:IPR000136) -0.0485668172496269 -0.427202438741536 0.67779526945482 1 0.137060805230608 3.70860528449705 -0.0485668172496269 0.132424676276457 AT5G64520_at 2.73526884264147 3.10104573597975 3.42176229121511 3.4856953787546 3.15989606251584 3.34186865714312 3.00833640932254 2.57718924961981 2.26221094921187 2.47269939063988 2.34624137043177 3.17403261772572 2.62748034074841 2.25218787700376 2.85575008710243 2.84909879605327 2.79534056591852 2.43786785098839 2.28813271761081 0.254542354284498 0.25618497606009 0.254437475667538 0.251231083705159 0.250816212695341 0.277208940092899 0.267828109135012 0.250816212695341 0.27080422852431 0.258979514880311 0.250816212695341 0.266869019138372 0.260961128443274 0.253675058434322 0.257270866590064 0.250816212695341 0.250816212695341 0.269020742962595 0.256330914504863 5 5 + 25806656 25807398 25806948.375 25805260 25807590 + gene protein_coding_gene TRUE TRUE AT5G64520.1|AT5G64520.2|AT5G64520.3 XRCC2 (Arabidopsis thaliana homolog of XRCC2) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects. Identical to DNA-repair protein XRCC2 homolog (X-ray repair cross-complementing protein 2 homolog) (AtXRCC2) (XRCC2) [Arabidopsis Thaliana] (GB:Q682D3;GB:Q8GVF2;GB:Q9FLG6); similar to PREDICTED: similar to LOC553395 protein [Strongylocentrotus purpuratus] (GB:XP_791162.1); contains domain no description (G3D.3.40.50.300); contains domain X-RAY REPAIR CROSS COMPLEMENTING PROTEIN 2, XRCC2 (PTHR22942:SF5); contains domain RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER (PTHR22942)|similar to PREDICTED: similar to LOC553395 protein [Strongylocentrotus purpuratus] (GB:XP_791162.1); contains domain no description (G3D.3.40.50.300); contains domain X-RAY REPAIR CROSS COMPLEMENTING PROTEIN 2, XRCC2 (PTHR22942:SF5); contains domain RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER (PTHR22942) 0.0434037509836448 0.426935626746039 0.677983599861817 1 0.136946957875701 5.60801497376606 0.0434037509836448 0.103382177423935 AT5G16050_at 9.65895912867915 9.90383456814226 10.4778389291064 10.5192637229123 10.7447886056417 10.4062145744431 10.0682048778549 9.992663601092 9.256280191054 9.14339508212843 9.88856851771577 9.86698903059239 9.97909897619376 9.83496907538698 9.65136118081362 9.98281056370168 10.0034898818811 9.91919212377706 9.34541250978478 0.156683715698916 0.149413815194454 0.155220711501239 0.155402588420749 0.147763165801961 0.150794480325047 0.149960783179081 0.143952495464569 0.158345545088827 0.154078006857475 0.143952495464569 0.147066290782361 0.14570792163758 0.15081335391519 0.147895659818946 0.144019129959326 0.158879041946021 0.152828711152371 0.155509906087078 5 5|0 -|/ 5244292 5245077 5244846.875 5243748 5245823 - gene protein_coding_gene TRUE TRUE AT5G16050.1 GRF5 (GENERAL REGULATORY FACTOR 5); protein phosphorylated amino acid binding Encodes GF14 upsilon chain, a 14-3-3 gene family member. Identical to 14-3-3-like protein GF14 upsilon (General regulatory factor 5) (GRF5) [Arabidopsis Thaliana] (GB:P42645); similar to GRF7 (General regulatory factor 7), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT3G02520.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96912.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) -0.0390076274402562 -0.426733933595598 0.678125981170333 1 0.136860941901928 19.7910572575241 -0.0390076274402562 0.0738314665716104 AT5G62530_at 6.70305861719824 6.58167770299008 7.89036496682167 7.92804044247664 7.96218616436363 7.26015620549289 7.56929846079422 7.1465995268329 5.53307876916032 6.6806555348593 7.50676493870876 7.54976934351238 7.0471064436141 7.50784960963792 7.22815860461392 7.19050245177965 7.64124141399138 7.00301519168521 6.19798829303233 0.171416709609466 0.174056467400301 0.172090377720757 0.17318645139132 0.170249970842523 0.181463225070097 0.170385945773009 0.171090431123938 0.185417611535361 0.182823945034883 0.171560860984574 0.172746527863340 0.169182378153633 0.169747204496945 0.183532173893777 0.177078473824223 0.177758496616301 0.190197935369271 0.187743990802574 5 5|0 -|/ 25116999 25117878 25117440.889 25116229 25120524 - gene protein_coding_gene TRUE TRUE AT5G62530.1 ALDH12A1 (Aldehyde dehydrogenase 12A1); 1-pyrroline-5-carboxylate dehydrogenase/ 3-chloroallyl aldehyde dehydrogenase Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. Identical to Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial precursor (EC 1.5.1.12) (P5C dehydrogenase) (AtP5CDH) (Aldehyde dehydrogenase 12A1) (ALDH12A1) [Arabidopsis Thaliana] (GB:Q8VZC3;GB:Q93Y55;GB:Q9FJJ2); similar to ALDH7B4 (ALDEHYDE DEHYDROGENASE 7B4), 3-chloroallyl aldehyde dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G54100.2); similar to Aldehyde dehydrogenase; Carbamoyl-phosphate synthase L chain, ATP-binding [Medicago truncatula] (GB:ABE84468.1); similar to Probable aldehyde dehydrogenase (Flax-inducible sequence 1) (GB:Q40255); similar to putative aldehyde dehydrogenase WIS1 [Triticum aestivum] (GB:AAL70109.1); contains InterPro domain NAD-dependent aldehyde dehydrogenase; (InterPro:IPR012303); contains InterPro domain Aldehyde dehydrogenase; (InterPro:IPR002086) -0.05062218310522 -0.42661040124176 0.678213192915197 1 0.136808278465856 14.1159436935597 -0.05062218310522 0.143507422380135 AT5G18180_at 2.35062766215376 1.85482482456166 2.38016357758775 2.55305469733181 1.81220252118059 2.64935697871958 1.31757426372900 2.22200211332051 1.99416030173368 2.21506740386751 2.36871981372744 2.25886787392143 2.03550823594901 2.1627110113673 2.47454473457185 1.95587991729271 2.2747092496908 2.57237834630483 2.19482600541744 0.218125663746255 0.222483701255724 0.221774148869528 0.219817192672794 0.215418736116925 0.219025343712120 0.228251125435507 0.218977437828095 0.214834558993903 0.227865929787213 0.217913317782253 0.213873021232321 0.222301244944514 0.214038687184857 0.215575137699381 0.214622440913681 0.226950634765298 0.217874462339716 0.215933888250315 5 0|5 /|- 6008567 6009176 6008844.667 6008563 6009607 - gene protein_coding_gene TRUE TRUE AT5G18180.1 Gar1 RNA-binding region family protein Identical to Putative H/ACA ribonucleoprotein complex subunit 1-like protein 2 [Arabidopsis Thaliana] (GB:Q9FK53); similar to Gar1 RNA-binding region family protein [Arabidopsis thaliana] (TAIR:AT3G03920.1); similar to Os11g0579800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068150.1); similar to AEL096Wp [Eremothecium gossypii] (GB:NP_984765.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637); contains InterPro domain Gar1 protein RNA-binding region; (InterPro:IPR007504) 0.069495563664165 0.426009793429056 0.678637282290465 1 0.136552441022867 4.34127556391944 0.069495563664165 0.231824089258058 AT5G47230_at 3.45852784265177 3.65581688804847 3.59544501765053 3.72287157572586 3.63050677783227 4.37259841017361 2.40077724337642 3.29124638157481 3.94546408500970 3.50002014976721 5.02917890015536 4.99975868593723 4.09808310773322 4.46188317963697 4.38125265617911 4.14569246992536 3.91681296319618 4.20914340690461 3.87838632429145 0.21911943331535 0.222062896032500 0.226431467757667 0.221809202432746 0.228852880352435 0.230355402502455 0.240139602051705 0.225000885932844 0.229357845181722 0.223051354503218 0.220524429336343 0.227688358619973 0.221628172667592 0.228045970956284 0.217681166997230 0.216822491928855 0.226981357068659 0.222024653840617 0.224086908553917 5 5 + 19197618 19198177 19197863.909 19197166 19198356 + gene protein_coding_gene TRUE TRUE AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription factor/ transcriptional activator encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Identical to Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5) (EREBP-5) (AtERF5) (ERF5) [Arabidopsis Thaliana] (GB:O80341;GB:Q9LVT6); similar to ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17490.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD64947.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0628051970771604 -0.422172402718888 0.681349616342542 1 0.134926053161035 7.60589836257819 -0.0628051970771604 0.204672956723354 AT5G43760_at 9.1851443432281 9.41632757041765 9.61304958753608 9.7835409565571 10.6413214113365 10.2846615041128 9.68061713610752 9.79006540997638 10.0734842725571 9.76337962409006 11.3835607836379 11.1713703498315 10.8888937406493 11.083626650489 10.7113879425184 10.6233857079617 9.76907613885444 10.7319115476956 10.0550533723428 0.112580489652252 0.109609905697345 0.122018834443531 0.112914733740185 0.113927510751803 0.118497789351056 0.114037075128843 0.112197881933242 0.118025856773252 0.115742069803064 0.116240020635878 0.114705911240243 0.113015698692455 0.125267596062380 0.115024099633800 0.113735536836022 0.131042060393298 0.118717200078193 0.117258270093994 5 5 + 17605114 17605682 17605354 17602990 17605824 + gene protein_coding_gene TRUE TRUE AT5G43760.1 beta-ketoacyl-CoA synthase, putative Identical to 3-ketoacyl-CoA synthase 19 (EC 2.3.1.-) (KCS-19) (Very-long-chain fatty acid condensing enzyme 19) (VLCFA condensing enzyme 19) (KCS19) [Arabidopsis Thaliana] (GB:Q9FG87;GB:Q94CA1); similar to very-long-chain fatty acid condensing enzyme, putative [Arabidopsis thaliana] (TAIR:AT2G16280.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT1G04220.1); similar to beta-ketoacyl-CoA synthase, putative [Arabidopsis thaliana] (TAIR:AT2G26640.1); similar to fatty acid elongase 1-like protein [Limnanthes douglasii] (GB:AAG28600.1); similar to putative fatty acid elongase [Zea mays] (GB:CAC01441.1); similar to beta-ketoacyl-CoA synthase (GB:AAC49186.1); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328) 0.0394351271311399 0.420261263283506 0.682702210669911 1 0.134121356446007 20.1790280052597 0.0394351271311399 0.0814825096815619 AT5G57790_at 2.94304900055675 2.56069581188437 3.44643482025803 3.27241103574123 3.86648984131848 3.57735673805538 3.24715792331629 3.01635632451654 3.11254087455814 3.47311783751217 3.76882477431354 3.16345486519586 3.56571773850557 3.40077228710249 3.54644992645174 3.32081514769557 3.54138625896342 3.59919866763083 2.80440707912462 0.199730050581971 0.191727673935100 0.190572623172251 0.190572623172251 0.202971295993012 0.194344758425458 0.208152565400129 0.195382475831916 0.198361482637881 0.190572623172251 0.194006321614908 0.190572623172251 0.200310600083323 0.199044071518346 0.194554029723296 0.198422004310325 0.217325544222625 0.198268901688440 0.191329311128651 5 5 - 23429897 23430546 23430204 23429251 23430853 - gene protein_coding_gene TRUE TRUE AT5G57790.1|AT5G57790.2 unknown protein -0.0416738920831004 -0.420058793926672 0.682845575425306 1 0.134036311860360 6.55041863127122 -0.0416738920831004 0.0968712906625921 AT5G52020_at 1.89046133884564 1.38944056134269 1.78378047917731 1.86346087297049 1.85294963993557 1.81825296872636 1.61739740781635 1.79591472947847 1.51233066832398 1.84027326998503 2.05627922087947 1.85282252868019 2.02721126483804 1.91856814663367 2.02981368645842 2.04191426916438 2.01723051890820 2.15967363665397 2.04598300260827 0.193289497881012 0.194618089906228 0.203148006390399 0.196146126940267 0.190831392731443 0.198369102221706 0.191061160099423 0.194404686175748 0.196354800673034 0.193977613484593 0.190831392731443 0.195392465571470 0.192874205810269 0.19340613880317 0.196776600880220 0.191517297305951 0.193515428740446 0.198074191645761 0.193837906604627 5 5 - 21141489 21141973 21141767.545 21141184 21142174 - gene protein_coding_gene TRUE TRUE AT5G52020.1 AP2 domain-containing protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. similar to DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] (TAIR:AT1G12630.1); similar to DRE-binding protein 3b [Gossypium hirsutum] (GB:ABB45861.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.0409754649283135 0.418569056809849 0.683900833655146 1 0.133411783368722 3.65769131945301 0.0409754649283135 0.0932639538594606 AT5G05850_at 3.36991388240978 2.81433862003026 2.53810003117022 2.79047571712829 2.61524695533849 2.69279818262077 2.01532057948933 2.0225041971684 3.45396782619414 2.43921662074528 3.94705858496103 3.49800969620889 3.52361022247489 3.77547493901847 3.53343424367471 3.83085814224468 3.19392867562905 3.3695558659194 2.95211584464511 0.240250939679147 0.228283740894927 0.229168416721699 0.228283740894927 0.232368257032945 0.234876924657389 0.24104468253359 0.245793369814603 0.235981995649009 0.228283740894927 0.228283740894927 0.23248778846856 0.228283740894927 0.231284634386404 0.229508336322459 0.231111767065997 0.235702910264658 0.234213051460049 0.228283740894927 5 5 - 1762716 1763167 1763007.818 1762410 1764679 - gene protein_coding_gene TRUE TRUE AT5G05850.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G11330.1); similar to OSIGBa0116M22.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66934.1); similar to Os02g0593600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047301.1); similar to leucine-rich-repeat protein [Helianthus annuus] (GB:CAA57523.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591) -0.0430114380977883 -0.418171805660145 0.68418234706186 1 0.133245609133691 5.87354963406673 -0.0430114380977883 0.106456494156143 AT5G16300_at 6.07430141204992 6.25735119355369 7.14917376212847 7.13508185508778 7.11093091717582 6.96636854905678 6.01908215363239 6.09385989454038 5.82901636359206 5.32189612951051 7.06125934287596 7.02769623649796 6.37502207917158 7.01594701763805 6.77548268845717 6.51002904070827 5.92209329300678 6.8003052400584 5.7796045849191 0.181958711103567 0.176165229522738 0.173546081262137 0.182991648791378 0.180597187129051 0.183081209738745 0.177925329459725 0.180225170946843 0.180295487357845 0.173796983145957 0.173546081262137 0.187492682606655 0.173589558394738 0.188787282509875 0.175099101862191 0.182599385104884 0.197704759859285 0.181604966375408 0.181639529344840 5 0|5 /|+ 5341466 5342158 5341857.75 5338122 5342435 + gene protein_coding_gene TRUE TRUE AT5G16300.1|AT5G16300.2|AT5G16300.3 similar to PREDICTED: similar to low density lipoprotein B isoform 1 [Bos taurus] (GB:XP_593871.2); similar to Os01g0777000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044419.1); contains domain Cullin repeat (SSF74788) -0.0349143487798422 -0.418008213293797 0.684298292001207 1 0.133177221037244 12.7655112471410 -0.0349143487798422 0.0424586692839363 AT5G11760_at 8.97225124361887 8.94076912267905 9.56439803073894 9.51678958634 9.94851917399929 9.84682916461173 8.82948013052394 8.52257778784602 8.4800511436801 8.60201280583138 9.26499220191471 9.29469776977831 9.27867789052093 9.2787909739924 9.33255523914884 9.11565877651358 9.42842248135976 9.17475516070787 8.65033271487414 0.100149928682866 0.0939497147207824 0.0988387350115131 0.0991882203328716 0.0982786169237373 0.0992486922067399 0.0966417829339066 0.0989736462774632 0.121344423054090 0.098462132343068 0.100675778677563 0.0936571192334145 0.0959090418888618 0.0993300831520204 0.0981478548138667 0.0950698491431149 0.09676256916494 0.101360180346158 0.0969915862917565 5 5 + 3789765 3790272 3790037.364 3789260 3790453 + gene protein_coding_gene TRUE TRUE AT5G11760.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95651.1) 0.0362328623538579 0.417954308273272 0.68433649867563 1 0.133154692258387 18.1919689633134 0.0362328623538579 0.056815612984822 AT5G14080_at 3.43243550347609 4.3585272255098 4.29052233002165 4.80371136912745 5.52412857759032 5.75015540399705 3.43468240923481 4.1764527187952 4.23333465824701 4.58395163477401 5.16167965991971 5.16189857666334 4.95241499157776 5.66888649319147 4.47069579652817 5.44989128539078 5.1070543641538 4.8899708851136 5.34972524016513 0.291312520823247 0.295765106896588 0.291256576830906 0.288438478804391 0.288438478804391 0.302151023032192 0.288774510535128 0.293214929154522 0.291622732701553 0.288493244465289 0.288438478804391 0.288438478804391 0.288438478804391 0.288438478804391 0.288438478804391 0.289128886409975 0.311091300482996 0.293103992903541 0.288438478804391 5 5 - 4543284 4543719 4543423 4543103 4545258 - gene protein_coding_gene TRUE TRUE AT5G14080.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G61990.1); similar to hypothetical protein MtrDRAFT_AC146789g10v2 [Medicago truncatula] (GB:ABE90509.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0671147771540087 -0.417884280819882 0.68438613395444 1 0.133125429543179 9.38640128436707 -0.0671147771540087 0.227112089946809 AT5G52260_at 0.557610966929479 0.72675553220265 0.873987783937176 1.41523277988647 0.118869769163153 0.745128932123213 0.292572424068921 0.800497814670696 1.15804501122422 1.04369142685679 1.07059983584372 1.10593978739536 0.674800291703155 0.894082399036745 0.604079055276063 0.627443069602828 0.682348630063191 1.09637163457585 0.900909881549816 0.196717640585876 0.196717640585876 0.203378491028866 0.201529206465467 0.199719405890840 0.200018910675036 0.204075115136867 0.203826847108739 0.198609867451511 0.201412513199561 0.199871529327411 0.202376700199219 0.204564263975845 0.198401916191482 0.200806863150847 0.197221935065492 0.206121625387482 0.217707474398477 0.199084354264160 5 5 + 21237747 21238351 21238098.636 21237391 21238514 + gene protein_coding_gene TRUE TRUE AT5G52260.1 AtMYB19 (myb domain protein 19); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to AtMYB18 (myb domain protein 18), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G25560.1); similar to Os04g0532800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053406.1); similar to MYB transcription factor MYB94 [Glycine max] (GB:ABH02915.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.054875888204529 -0.417253996787446 0.684832948017773 1 0.132862262672653 1.63066876427975 -0.054875888204529 0.170592295926563 AT5G64890_at 1.61120086121378 1.63746838467543 2.31919916145371 3.04834459603551 1.80040122374071 1.97362160130756 1.90746889435095 2.01177533023789 1.79945636456205 1.97883005695109 1.72935491768512 1.87033276360801 1.88580689039133 1.93127001953353 1.22607334931148 2.02230031839859 1.62501829200936 2.15452962482235 1.87759145451792 0.226952313432546 0.228317743689789 0.242297641907941 0.245132585085936 0.232694424488376 0.237819613488167 0.23337309078208 0.238216622035968 0.230359946019606 0.230831871393182 0.230066157116963 0.231153981093307 0.230858871265234 0.235833803430574 0.236295180258559 0.229650484245501 0.232673939012967 0.239816741901024 0.232383250325318 5 5 + 25951912 25952533 25952241.364 25951794 25952747 + gene protein_coding_gene TRUE TRUE AT5G64890.1 PROPEP2 (Elicitor peptide 2 precursor) Identical to Elicitor peptide 2 precursor (PEP2) [Arabidopsis Thaliana] (GB:Q9LV88;GB:Q8L902); similar to ATPEP1/PROPEP1 (Elicitor peptide 1 precursor) [Arabidopsis thaliana] (TAIR:AT5G64900.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1) 0.0471007729474032 0.416562858920869 0.685323047375902 1 0.132574127860929 3.88412420528377 0.0471007729474032 0.131022859630003 AT5G10930_at 6.5650846794355 7.18917167210971 8.76508889186204 9.16527446831674 9.2722133826234 9.07358469105984 9.10892235133503 9.17880250194194 7.58388490431551 8.00882807995825 8.09634727397975 7.94984676461433 9.05344327836533 8.65454465062827 7.42919993736857 9.04364480001548 9.35280220487304 7.94171060021576 8.01430866539507 0.191206004705735 0.182280260489085 0.19699253283148 0.197326752976777 0.188504570013752 0.192239524841251 0.190474731216797 0.190231074693620 0.196931010919274 0.188870242841271 0.186772422494932 0.184412355922940 0.190896390144273 0.1855370214728 0.198945602993170 0.182429052312700 0.198717940108152 0.195889680450909 0.188932581687585 5 5 - 3445601 3446129 3445893.364 3445367 3447115 - gene protein_coding_gene TRUE TRUE AT5G10930.1 CIPK5 (CBL-INTERACTING PROTEIN KINASE 5); kinase Encodes CBL-interacting protein kinase 5 (CIPK5). similar to CIPK25 (CBL-INTERACTING PROTEIN KINASE 25), kinase [Arabidopsis thaliana] (TAIR:AT5G25110.1); similar to CBL-interacting protein kinase 6 [Populus trichocarpa] (GB:ABJ91234.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0473732022879072 -0.415176710506316 0.686306450122085 1 0.131997633747894 16.6943676574924 -0.0473732022879072 0.133372238332165 AT5G59370_at 1.84143475060648 1.54462894037243 1.91444596863921 2.02144968776279 1.68543407109145 2.04598795968390 1.54897848465278 1.57802562058459 1.95428651961886 1.49570691414662 1.64871889558567 1.73851425082413 1.89586828074247 1.73217949309800 1.9545342194366 2.05360965560604 1.8130688037695 2.17203764458872 1.96381949312389 0.191339178569998 0.190565753805843 0.197750230234708 0.202186062420285 0.190492435505594 0.206506587760299 0.198616319964973 0.200321317427173 0.196073635507714 0.206522122388686 0.191086710570244 0.195651498453966 0.194402873605613 0.196460363530923 0.196002193865685 0.192171389552150 0.195841682717093 0.193357238856057 0.195089077123297 5 5 + 23968109 23968774 23968428.818 23966965 23969063 + gene protein_coding_gene TRUE TRUE AT5G59370.1|AT5G59370.2 ACT4 (ACTIN 4) Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen. Identical to Actin-4 (ACT4) [Arabidopsis Thaliana] (GB:P53494); Identical to Actin-12 (ACT12) [Arabidopsis Thaliana] (GB:P53497); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT12 (ACTIN-12), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G46520.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.2); similar to Actin (GB:Q05214); similar to Actin-58 (GB:P30167); similar to Actin (GB:O81221); contains InterPro domain Actin; (InterPro:IPR004001); contains InterPro domain Actin/actin-like; (InterPro:IPR004000) 0.0391634444314085 0.415054024430519 0.686393519129636 1 0.131946698431450 3.61288354263396 0.0391634444314085 0.0830637739300572 AT5G07730_at 3.22438731863449 3.10252154212921 3.41741945624475 3.48146507184356 3.81843474992393 3.92818589292648 2.6405587029286 2.77578230751238 3.96603977169228 2.85480622491680 3.96560073438062 3.54164817823923 3.42552680013364 3.7464972966837 3.6096088358302 3.54735752843832 3.19638392724533 4.03995115992374 3.11931030646612 0.202090064457528 0.205309432061128 0.218238348007684 0.207977263907765 0.202500861661447 0.208366914935151 0.202579359143502 0.205677655769446 0.206555121652438 0.210546627766014 0.209286610084801 0.205793732000290 0.207262496054643 0.215002367325014 0.205627582706535 0.202090064457528 0.204441772784953 0.206779812636997 0.202090064457528 5 5 - 2457566 2458150 2457885.545 2457348 2458431 - gene protein_coding_gene TRUE TRUE AT5G07730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61360.1) -0.0343403061176473 -0.414824816996502 0.686556198008995 1 0.131851577819308 6.7723230012518 -0.0343403061176473 0.0384180749479117 AT5G08490_at 1.60546864504066 1.67411415422967 1.87931253522059 1.75690632782250 1.38878655370481 1.66591275423512 1.43531472606474 1.16730641571840 1.71038004803553 1.63592131930297 1.44470592148905 1.59669799668739 1.45219636315147 1.72548591722108 1.26452658019148 1.52815241480533 1.88814674367194 1.44878779224632 1.44433877927855 0.185625375394978 0.186725585953557 0.188815420160995 0.186789227558836 0.183764873999299 0.191134716532151 0.190999087070290 0.183767442056566 0.192498966829216 0.185378797786681 0.19596080537915 0.183764873999299 0.184128755720940 0.186539097720981 0.189193272507987 0.184488057461545 0.183764873999299 0.189348155608243 0.183764873999299 5 5 - 2745267 2745773 2745562.636 2745209 2747758 - gene protein_coding_gene TRUE TRUE AT5G08490.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G21300.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83958.1); similar to Os02g0290000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046588.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0375585266418827 -0.4147474365593 0.686611122165816 1 0.131819476554333 3.14187402153224 -0.0375585266418827 0.0709994317801016 AT5G49310_at 1.02458852230838 1.25467781490668 1.49941055064646 1.22640407840092 1.07694056376095 1.33450798513729 1.43294204638127 1.03186272402501 1.68140030651032 1.25315902519478 1.12280454453622 1.33155378528989 1.58975277486916 1.14212928909298 1.55855840425849 1.30202475438321 1.14756921093139 1.4975367897912 1.11054676607351 0.231470556803391 0.218857564938327 0.236733048073750 0.220235862366828 0.219123679650247 0.232300805406962 0.218469834410024 0.229481317925595 0.223644388682540 0.225080396722255 0.223711004719912 0.221111939311878 0.225918429349118 0.233556034602729 0.223351538983035 0.218469834410024 0.236798466185424 0.228048123767299 0.218930589550812 5 5 - 20009245 20010002 20009608.909 20009242 20011742 - gene protein_coding_gene TRUE TRUE AT5G49310.1 importin alpha-1 subunit, putative similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.2); similar to putative importin alpha [Trifolium pratense] (GB:BAE71209.1); similar to importin alpha 2 [Capsicum annuum] (GB:AAK38727.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin alpha-like protein, beta-binding region; (InterPro:IPR002652) -0.0420908476488404 -0.414521844197356 0.68677125706643 1 0.131725922598749 2.57759673239767 -0.0420908476488404 0.103062619795696 AT5G15920_at 4.17398050426193 4.40037373400108 4.87894693595480 5.11895575714536 4.95702145316749 5.04686566146592 3.81901324289695 4.17513353731852 3.08896089272825 3.32054894466947 4.02294646619528 4.40823721612378 4.62934181697494 3.59064702399786 3.97316551538366 4.67817440752566 3.74105985398561 4.03484415824464 3.66446890016629 0.262463628883387 0.252042152549724 0.265240081414721 0.261599942815641 0.25346248221787 0.273435535396776 0.25147772926589 0.259794170989727 0.257754734546858 0.255294475309335 0.25147772926589 0.253175331451354 0.254286492590754 0.253909289400049 0.259048722441240 0.255650867591015 0.274202490127345 0.268470520537229 0.25147772926589 5 5|0 +|/ 5198845 5199462 5199124.9 5195686 5199562 + gene protein_coding_gene TRUE TRUE AT5G15920.1 structural maintenance of chromosomes (SMC) family protein (MSS2) similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC), ATP binding [Arabidopsis thaliana] (TAIR:AT5G61460.1); similar to Os05g0596600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056521.1); similar to Structural maintenance of chromosome protein SMC, C-terminal [Medicago truncatula] (GB:ABE93633.1); similar to SMC5 protein [Oryza sativa] (GB:CAD59412.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395) 0.0394196071939358 0.414263339217796 0.686954774550331 1 0.131618780102585 8.31768383818914 0.0394196071939358 0.0854392054774293 AT5G25400_at 0.570672829738234 0.909857801708853 1.61227781693556 1.37711073834757 0.778052803356154 1.13725144666341 0.733102812670542 1.34455542020220 1.16820377675584 0.992733696832958 1.03733252673460 0.861984063576243 1.04672227878397 0.762649214011646 0.734964350436136 1.15085771339548 1.30338906557126 0.608192075508777 0.967067529865697 0.208624281909199 0.210046782884822 0.217381318663755 0.210507058598850 0.212065939568534 0.210273003367211 0.223485919350415 0.21040626333638 0.213220314264628 0.207661549593297 0.207661549593297 0.20881230391412 0.208406572378757 0.208567410679113 0.210539806576990 0.207661549593297 0.213505737037497 0.233550487456754 0.208929328878849 5 5 + 8823817 8824266 8824039.182 8823286 8824335 + gene protein_coding_gene TRUE TRUE AT5G25400.1 phosphate translocator-related similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT5G11230.1); similar to Protein of unknown function DUF250 [Medicago truncatula] (GB:ABE88491.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.0488087328514009 0.413734232508953 0.687330463217708 1 0.131399682657075 2.04832508144636 0.0488087328514009 0.141994273484734 AT5G06710_at 4.5786875492624 4.9320842007609 4.23104956209291 4.48261757336183 5.42661349023474 5.4759866978178 4.79453905526934 5.05450042646473 3.58736775091691 5.03554558861824 6.18179446755419 6.69435877813973 6.78132850103882 5.83575260027687 6.21272542839172 6.78055035736961 6.21572992833218 6.46959652035534 4.83729620392663 0.226974088787727 0.237724680694251 0.225998245708281 0.230920304410791 0.232975210524955 0.228418857523198 0.226383513589954 0.228413971048138 0.229906396377501 0.234444726407451 0.231360684288204 0.224995836638792 0.22303158223931 0.238850752304810 0.231231273624475 0.227006972355336 0.244408975707298 0.234366341154313 0.231059825857119 5 5|0 -|/ 2068325 2069360 2068701.6 2068066 2070362 - gene protein_coding_gene TRUE TRUE AT5G06710.1|AT5G06710.2 HAT14 (homeobox-leucine zipper protein 14); DNA binding / transcription factor|HAT14 (homeobox-leucine zipper protein 14); DNA binding Homeobox-leucine zipper protein. Identical to Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14) (HAT14) [Arabidopsis Thaliana] (GB:P46665;GB:Q0WTX1;GB:Q84TE1); similar to HAT22 (homeobox-leucine zipper protein 22), transcription factor [Arabidopsis thaliana] (TAIR:AT4G37790.1); similar to homeobox protein (GB:AAA56900.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057)|Identical to Homeobox-leucine zipper protein HAT14 (Homeodomain-leucine zipper protein HAT14) (HD-ZIP protein 14) (HAT14) [Arabidopsis Thaliana] (GB:P46665;GB:Q0WTX1;GB:Q84TE1); similar to HAT1 (homeobox-leucine zipper protein 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G17460.1); similar to homeobox protein (GB:AAA56900.1); contains InterPro domain Homeobox; (InterPro:IPR001356) 0.039668619146549 0.413166626675258 0.687733586423587 1 0.131164943840554 10.3136178629929 0.039668619146549 0.087933787617641 AT5G07640_at 1.42180376833137 1.17609425765162 1.49732698749252 1.50592111531562 1.29687883660318 1.44756724301479 1.17464789964917 1.16265055468840 1.59715041810777 1.51869689930980 1.60744276966144 1.52764187557768 1.25189787079553 1.58201824245307 1.10362342800851 1.25312501898177 1.29445568883124 1.24900453578743 1.22691469689960 0.213289861278618 0.211670227696297 0.209743402046606 0.219144886486293 0.216216196011953 0.212862207475001 0.215776111973299 0.216501395544272 0.217408815979926 0.216370980875762 0.215491276439777 0.214543691606491 0.224691036131323 0.218482893538593 0.212275848251838 0.209743402046606 0.212027213943700 0.218206495136886 0.214335463256450 5 5 + 2415280 2415848 2415543.818 2414848 2416278 + gene protein_coding_gene TRUE TRUE AT5G07640.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G19610.2); similar to Zinc finger, RING-type; Zinc finger, C6HC-type [Medicago truncatula] (GB:ABE85921.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0350366241607887 -0.411823456750019 0.688687933736466 1 0.130610703110960 2.73848059127724 -0.0350366241607887 0.0499459728946186 AT5G61050_at 0.625944629573356 0.901199755746038 0.3395590330942 0.872616233027684 0.547439632257907 0.84811887816055 0.365475886386179 0.391403906691652 0.689501942848526 0.664576965093725 0.643943981310723 0.955383118699376 0.649603331353375 0.683552849325441 0.357477294534869 0.94300714220758 0.65020143705591 0.668934088426218 0.403159295342343 0.205846561791955 0.207006843594197 0.210443286805511 0.203934167958361 0.204444429768480 0.204987128663188 0.210686429499494 0.21104295487294 0.213531400426054 0.206603255688971 0.208248255080178 0.206044402820751 0.208200114952472 0.202967780631776 0.202967780631776 0.214211985455421 0.209267213602043 0.206567533626044 0.219629108932018 5 5|0 -|/ 24582711 24583650 24583237.4 24582708 24583841 - gene protein_coding_gene TRUE TRUE AT5G61050.1 histone deacetylase-related / HD-related similar to HDA05 (HISTONE DEACETYLASE5), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G61060.1); similar to HDA1 [Zea mays] (GB:AAP92528.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286); contains InterPro domain Actin-crosslinking proteins; (InterPro:IPR008999) 0.0438969120131575 0.411114774624445 0.689191694956041 1 0.130318977829761 1.25134923093005 0.0438969120131575 0.116216950851521 AT5G22750_at 1.75893442803240 1.48579521558116 1.8266451376032 1.78193736789943 1.68417592230629 1.68262465817121 1.70548214879823 1.93445623911004 1.84118061239303 1.89575332214888 1.99081996303711 1.96926542021671 1.80887766386518 1.98597089674654 1.96638291490081 1.83950531879988 1.99620687461542 2.78554329432305 1.80479297335715 0.197387263780439 0.211578908281720 0.199696948995976 0.195957405401767 0.202461061180664 0.198044620012157 0.204622911876513 0.205552898994156 0.201438534074509 0.204396054184618 0.198412491229208 0.205501373783082 0.196923967463527 0.198394785457014 0.206259751044385 0.198206167812961 0.200093526014812 0.204545093896416 0.203756150765096 5 5|0 -|/ 7565429 7566435 7566029.556 7565040 7571086 - gene protein_coding_gene TRUE TRUE AT5G22750.1 RAD5; ATP binding / DNA binding / helicase/ protein binding / zinc ion binding DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer Identical to Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) [Arabidopsis Thaliana] (GB:Q9FNI6); similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43530.1); similar to putative DNA repair protein [Ipomoea trifida] (GB:AAS79594.1); similar to Os02g0527100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047001.1); similar to OSJNBa0096F01.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE04094.3); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0361011826575622 -0.409926375553162 0.690036814099728 1 0.129830869393120 3.6775383126608 -0.0361011826575622 0.0621638161937213 AT5G18210_at 4.5752368405634 4.78575667544716 5.62879730082977 5.57704727450595 6.2077779102134 5.05797938986077 4.53545478517829 4.07112270227471 4.32617797034908 4.30992397887302 5.41250477366864 5.22196928355536 4.82342162300293 5.19421725012199 5.19933514994615 4.72265007708496 5.01266242203136 5.32490498981925 4.23909972803401 0.223703768253276 0.218221136382856 0.216961723200957 0.219249191403601 0.231971368892178 0.228319269563775 0.215375684776715 0.236134759677324 0.228512275524949 0.227093900540749 0.213163177374129 0.213163177374129 0.219102416013144 0.221740787316205 0.217989299766907 0.213163177374129 0.220274306021875 0.235646886610479 0.213163177374129 5 5|0 +|/ 6018076 6018611 6018277.5 6017867 6019995 + gene protein_coding_gene TRUE TRUE AT5G18210.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G03980.1); similar to short chain dehydrogenase [Solanum tuberosum] (GB:BAE46415.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.063703723061603 0.409202598534138 0.690551738977592 1 0.129534263270365 9.75774265414544 0.063703723061603 0.217845345128232 AT5G52590_at 7.36327204203882 7.75223472848527 8.12727881323307 8.50966399291425 8.37879076734228 8.22815069072509 7.3982496976383 7.61018265133044 7.27615106874545 7.32341605343968 8.47533520268224 8.42661587062442 8.26966565111608 8.57424861352492 8.11297107106813 8.56976169282537 8.00112636337132 8.1476367756161 7.33874652473899 0.126361926671849 0.124632609869901 0.132269311677853 0.132040326633495 0.129273054899789 0.129335964707813 0.131724478349928 0.127297284296236 0.139789349854216 0.137390911501506 0.127793848469614 0.127840653588718 0.126382643221523 0.121916735070825 0.133344045301166 0.124258536259518 0.131291364344777 0.131825480039498 0.140052709673594 5 5 + 21356847 21360033 21358842.267 21356846 21360210 + gene protein_coding_gene TRUE TRUE AT5G52590.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT4G27100.2); similar to TBC1 domain family, member 15 [Xenopus tropicalis] (GB:NP_989223.1); similar to TBC1 domain family, member 15 [Xenopus tropicalis] (GB:AAH76966.1); similar to Os02g0709800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047892.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) -0.0416237145660225 -0.407591970007051 0.691698196105766 1 0.128876041004731 15.7384486083359 -0.0416237145660225 0.104568329886548 AT5G51650_at 1.19707324345477 1.1022973359866 1.50010313963471 1.80920134669823 1.14873164697663 1.68397674850156 1.26553103071320 1.62231156736832 1.37869698903598 1.36215092840500 1.38572109313626 1.57220867307917 1.62026915052035 1.42535401604049 1.24804462166602 1.14821862017615 1.71056319342605 1.57704281314440 1.5031059926228 0.19019996512682 0.192173288898625 0.189164109847212 0.192915286729002 0.189529208948857 0.19400968004604 0.187122165526539 0.196020674076457 0.198904774678340 0.200792776776824 0.199143452929661 0.189264188960663 0.191811519945006 0.187122165526539 0.192137351408992 0.187122165526539 0.193851336649301 0.191430467024492 0.198719541866836 5 0|5 /|- 20995713 20995999 20995843.556 20995429 20996475 - gene protein_coding_gene TRUE TRUE AT5G51650.1 unknown protein 0.0449078657942275 0.407194612811154 0.691981162721774 1 0.128714037363553 2.85394279541836 0.0449078657942275 0.124587801717381 AT5G53430_at 4.04957576911787 4.20132367062936 4.91913617608078 4.49690730967694 5.72388735758621 5.08358406421402 4.7757484295685 3.7594204881073 4.41203072804125 4.35770093369454 5.37225807375448 5.43831635777206 5.74343394048647 5.13927536824438 5.3377623059398 5.67974968448035 5.45990898417176 4.89031776032014 4.23758855644969 0.207857842391827 0.201941257580537 0.207942339445987 0.198988097381297 0.19903539152439 0.219074491505377 0.203388397222924 0.204560660571732 0.211959772397593 0.201199218485008 0.206287141635112 0.198772121387764 0.198954561701099 0.198772121387764 0.213440988819403 0.198772121387764 0.199931483656889 0.202042954039952 0.209779552426409 5 5|0 +|/ 21699269 21700358 21699689.7 21694372 21700720 + gene protein_coding_gene TRUE TRUE AT5G53430.1 SDG29 (SET DOMAIN GROUP 29); DNA binding Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. Identical to Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43) (Trithorax- homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) (ATX5) [Arabidopsis Thaliana] (GB:Q8GZ42;GB:Q941G9;GB:Q9LV06); similar to PHD finger protein-related / SET domain-containing protein (TX4) [Arabidopsis thaliana] (TAIR:AT4G27910.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61740.2); similar to Histone-lysine N-methyltransferase ATX4 (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4) (Protein SET DOMAIN GROUP 16) (GB:Q9SUE7); similar to PWWP; Nuclear protein SET; SET-related re (GB:ABE82747.1); similar to PWWP; Nuclear protein SET; Zinc finger, RING-type; Protein kinase C, phorbol ester/diacylglycerol binding; SET-related re (GB:ABE80834.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain SET-related region; (InterPro:IPR003616); contains InterPro domain PWWP; (InterPro:IPR000313) 0.0641768552765323 0.406622142586272 0.692388917838599 1 0.128480908284160 9.48539851585163 0.0641768552765323 0.221902741712645 AT5G62640_at 7.99666414061833 7.93836056769437 8.79249563114862 8.76503389323795 8.80958041174806 8.66845776025458 7.19850100805113 6.96494607742243 7.1048651767651 7.1288837557398 7.53863563490131 7.88196810669402 7.85115232903556 7.73810203856029 7.8841868803743 7.95068118668318 7.99243014417286 7.71999849759476 7.04778618888342 0.159432980636574 0.163462596876366 0.164782088076542 0.167118079889553 0.169868224284451 0.165404130146946 0.162261173895219 0.165874559390818 0.162861377510105 0.163148912596654 0.159899558296674 0.156873293215637 0.157584329812127 0.158298651017404 0.164834448345589 0.154023190160413 0.164033428455665 0.159918600082074 0.167548012452717 5 5|0 -|/ 25166810 25167482 25167083.6 25166659 25169767 - gene protein_coding_gene TRUE TRUE AT5G62640.1|AT5G62640.2 ELF5 (EARLY FLOWERING 5) nuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC similar to actin binding [Arabidopsis thaliana] (TAIR:AT1G31810.1); similar to putative hydroxyproline-rich glycoprotein DZ-HRGP [Oryza sativa (japonica cultivar-group)] (GB:BAD30150.1); contains domain FAMILY NOT NAMED (PTHR13361); contains domain SUBFAMILY NOT NAMED (PTHR13361:SF1)|similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT1G61080.1); similar to putative hydroxyproline-rich glycoprotein DZ-HRGP [Oryza sativa (japonica cultivar-group)] (GB:BAD30150.1); contains domain FAMILY NOT NAMED (PTHR13361); contains domain SUBFAMILY NOT NAMED (PTHR13361:SF1) 0.0344485324771795 0.406401517860496 0.692546090202944 1 0.128391147165981 15.5984996326293 0.0344485324771795 0.0485223064998846 AT5G18870_at 0.454398397215687 0.295535303109014 0.737175771165547 1.12254970143708 0.397445569036669 0.822259351922094 0.576416208257727 0.636020196387881 0.770348735528982 0.906302059872273 0.544349548735858 0.799228916057084 0.591634917601216 0.837974959197068 0.614934785715951 0.571548650448450 0.99338099413415 0.903668246047812 0.79198403084095 0.185384002812319 0.188042616406877 0.186151270910605 0.185384002812319 0.188451705119253 0.187266760189474 0.186546361230617 0.188072132992684 0.192354851468661 0.187314167448542 0.189397336917933 0.189923182387245 0.189667657242085 0.187685768450934 0.188404769925721 0.186640394456308 0.190822753852971 0.194834898985060 0.19012560604501 5 5 + 6298732 6300265 6299642 6298388 6300291 + gene protein_coding_gene TRUE TRUE AT5G18870.1 inosine-uridine preferring nucleoside hydrolase-related similar to inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G18860.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96887.1); contains InterPro domain Inosine/uridine-preferring nucleoside hydrolase; (InterPro:IPR001910) 0.0413212820446305 0.406254171434028 0.692651067795456 1 0.128331225545507 1.40770926364460 0.0413212820446305 0.103510695965340 AT5G37170_at 0.99413157958918 1.25903711541731 1.22246499303671 1.71708010540695 1.04539821251983 0.972423729068135 1.22655749365350 1.84753119194141 1.06303613140931 0.387821509098182 0.696520069140133 1.01952812510248 1.29534009453991 0.729810385426727 0.748275336559609 1.06235803928138 0.89786413529268 1.46403997390999 1.09727793799343 0.222158540182414 0.217882604208632 0.225443770740859 0.233714579402737 0.219565579614960 0.223641121608774 0.216045692664019 0.225068934644502 0.215811123062415 0.227361547797959 0.21994394886729 0.217427896832052 0.221821400652234 0.227998444756935 0.217464160685779 0.224216417585171 0.233702210252467 0.218307277284746 0.225601650307813 5 5|0 +|/ 14730768 14731490 14731110.6 14730041 14731533 + gene protein_coding_gene TRUE TRUE AT5G37170.1 O-methyltransferase family 2 protein similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77520.1); similar to O-methyltransferase family 2 protein [Arabidopsis thaliana] (TAIR:AT1G77530.1); similar to phloroglucinol O-methyltransferase [Rosa chinensis var. spontanea] (GB:BAD18975.1); contains InterPro domain SAM (and some other nucleotide) binding motif; (InterPro:IPR000051); contains InterPro domain O-methyltransferase, family 2; (InterPro:IPR001077); contains InterPro domain Dimerisation; (InterPro:IPR012967); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) -0.0483827887109932 -0.404806560046581 0.693682784535537 1 0.127743640494253 2.20487582561592 -0.0483827887109932 0.145381642217354 AT5G03795_at 2.13805283610444 1.93214314962931 2.46012792673632 1.99346396387214 2.11587921283943 2.14240591140433 1.90812716992533 2.19701479011249 2.29381244638051 2.05632839670626 2.30545176552935 2.333066362432 2.16401927462713 1.96945020568468 2.27182694064995 2.56930932908328 2.14932146354179 2.36948176985564 1.92339761292365 0.188827508695349 0.188380148607199 0.199591830292846 0.19008188168357 0.187713628677916 0.18717895227815 0.189669434069662 0.192583884327402 0.197255478701274 0.191378329212301 0.187697958674209 0.187982688000821 0.190807106203273 0.196971555984104 0.189537895467114 0.186558639250150 0.191212006590335 0.194331873441648 0.188396445911343 5 5 - 1007745 1008054 1007897.364 1007389 1010472 - gene protein_coding_gene TRUE TRUE AT5G03795.1 similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT3G07620.1); similar to Os07g0188700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059081.1); similar to EXO [Cucumis melo] (GB:AAU04753.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) -0.0407713785093653 -0.403827632273575 0.694380838690016 1 0.127347443951441 4.28973705720912 -0.0407713785093653 0.101548408312490 AT5G17930_at 3.37241263357325 3.76615130725212 4.27863275491124 4.50596048378281 4.81194624653923 3.76623075733859 4.20462405044974 4.00304228509317 3.08337709207051 3.47358047190507 4.01447443046998 5.30491616852763 4.12995616744467 3.95582334964655 4.26715089337251 4.49964510229859 3.89633787993399 4.04444648635125 3.69928667593395 0.242606045675498 0.240173748966700 0.239494777934180 0.241279431040329 0.235416533662083 0.242409570573953 0.23953958694394 0.237804392129771 0.257154856463511 0.243852243256096 0.236576623899483 0.235416533662083 0.238249113802602 0.244027193375784 0.243182759652353 0.235416533662083 0.260446625753533 0.255703832617083 0.236998869641764 5 5 - 5940261 5940763 5940421.909 5940000 5944432 - gene protein_coding_gene TRUE TRUE AT5G17930.1 RNA binding similar to MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G80930.1); similar to Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 [Medicago truncatula] (GB:ABE81638.1); contains InterPro domain Initiation factor eIF-4 gamma, middle; (InterPro:IPR003890); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) -0.0591049465994024 -0.403320784896253 0.694742378526406 1 0.127142674799928 7.93004600973026 -0.0591049465994024 0.20038983827715 AT5G07270_at 6.85997408930896 6.82583762718744 7.34686302078708 7.73214943438984 8.65500114478477 7.47803231867347 7.5699139033672 7.04728410207368 6.81858382518447 6.65107616599992 7.68336970918401 7.77452513555647 7.67800487909848 7.76656137239295 7.3854508035864 7.75694181406334 7.61019891477118 7.62753384147681 6.02145710726247 0.174513012218267 0.180023697096118 0.181827655943826 0.175852147421354 0.173349157816337 0.189030546322064 0.179134158394947 0.173619417012055 0.182643474587346 0.175998110594601 0.173815723683587 0.170647290827256 0.174030152135983 0.175007786256582 0.18012716556051 0.170647290827256 0.186442775375495 0.174168045562013 0.191765482052493 5 5 + 2282843 2283155 2283014.909 2280668 2283594 + gene protein_coding_gene TRUE TRUE AT5G07270.1 ankyrin repeat family protein similar to XBAT32 (XB3 ortholog 2 in Arabidopsis thaliana 32), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G57740.1); similar to pollen ankyrin-like protein [Lilium lon (GB:AAY26120.1); similar to pollen ankyrin, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47902.2); contains InterPro domain Ankyrin; (InterPro:IPR002110); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0659437833235401 -0.40308318083125 0.694911891567406 1 0.127046767104395 14.5180631258625 -0.0659437833235401 0.232693116046002 AT5G43080_at 2.40084044687833 2.68368681810791 2.89985158357682 3.31063811654894 2.12329455238463 2.50375205491065 2.32332961419073 2.39914978676682 2.22547145483694 2.13745852117212 2.60506108917889 3.49708723644921 2.63356255261167 3.05572474436008 3.2966046215393 2.54274285562029 3.13009726056239 2.67576290219841 3.04782580380365 0.237255591336574 0.247498930563662 0.239417442790253 0.236812617618361 0.242322783745815 0.25779808736549 0.239190984074042 0.24739479252165 0.244215522216426 0.237064932932445 0.235416493290583 0.235953640874729 0.234655394428226 0.241296325987698 0.235312868358945 0.233862146513372 0.249813956619537 0.230277321340906 0.234461471173429 5 5 + 17311013 17311980 17311524.182 17310455 17312017 + gene protein_coding_gene TRUE TRUE AT5G43080.1 CYCA3;1 (CYCLIN A3;1); cyclin-dependent protein kinase regulator similar to CYCA3,2, cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT1G47210.2); similar to cyclin-dependent protein kinase regulator-like protein [Brassica rapa] (GB:ABB97043.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.0419175029516671 0.403070362635982 0.69492103690546 1 0.127041594658485 5.28048403888024 0.0419175029516671 0.10934593583659 AT5G58190_at 5.29986032493029 5.75535727482628 6.46820611904092 6.45994731822918 6.0822020383274 6.53116169839721 5.04173658680687 4.85045026541089 5.16400400466231 5.40960982922302 6.18114177545995 6.17480237557668 5.88041026567556 6.23404051438434 5.91023547973616 6.18129522970311 6.29692293291639 5.98543543199545 5.39235146714810 0.201258734400906 0.199241765172775 0.199241765172775 0.203157640303884 0.202213707545779 0.207094674257470 0.218677461486564 0.210704161069835 0.21171817663487 0.201111449282612 0.199241765172775 0.201934411471294 0.204284760593396 0.199241765172775 0.207308135487130 0.202780640149222 0.203691849010480 0.210867975360573 0.199425990714545 5 5|0 +|/ 23565444 23566521 23566101.667 23563555 23566831 + gene protein_coding_gene TRUE TRUE AT5G58190.1|AT5G58190.2 ECT10 similar to ECT5 [Arabidopsis thaliana] (TAIR:AT3G13060.2); similar to YT521-B-like protein [Medicago truncatula] (GB:ABE91083.1); similar to Os08g0556000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062472.1); similar to Os08g0224200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061275.1); contains InterPro domain YT521-B-like protein; (InterPro:IPR007275) -0.0428571253226244 -0.402436059878154 0.695373653534992 1 0.126785837262358 11.5248771704255 -0.0428571253226244 0.115532738992794 AT5G13640_at 9.179490495529 9.01183208928717 10.0212818457376 10.030158698167 10.2821864653220 10.0279019214047 9.66255609820032 9.67099708739166 9.37088960731308 9.52975125896498 10.3448590833809 10.0821741629134 10.2457044057284 10.3644699187417 9.9217748846171 10.4353667135410 10.0452472905493 10.2409757046959 9.53326352784871 0.120051748952054 0.120295755218595 0.120544310240521 0.118814899363051 0.115907716431355 0.123499107986651 0.120486823246774 0.118518226244610 0.122014791119074 0.122631714592145 0.11876072650171 0.119978346314856 0.120497579389373 0.128999765888835 0.126846633946028 0.115907716431355 0.121925712107574 0.119294962504069 0.127510740606780 5 5 + 4396402 4397189 4396927.182 4393065 4397544 + gene protein_coding_gene TRUE TRUE AT5G13640.1 ATPDAT (Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase); phosphatidylcholine-sterol O-acyltransferase arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT) similar to lecithin:cholesterol acyltransferase family protein / LACT family protein [Arabidopsis thaliana] (TAIR:AT3G44830.1); similar to lecithine cholesterol acyltransferase-like protein [Medicago truncatula] (GB:AAP47635.1); similar to hypothetical protein [Ipomoea trifida] (GB:BAF36362.1); similar to putative phosphatidylcholine-sterol acyltransferase [Ipomoea trifida] (GB:AAS79590.1); contains InterPro domain Lecithin:cholesterol acyltransferase; (InterPro:IPR003386) 0.0344617895056945 0.402052549481367 0.695647373798951 1 0.126631391007848 19.5798204135782 0.0344617895056945 0.0527518814228835 AT5G01180_at 1.38020764044826 1.95471809454769 1.16526055279570 1.13064785479131 1.90571326579516 1.89423020050416 2.50670880184779 2.32348679233566 3.00721213357239 2.67007225032878 3.60382515609277 4.63660275217174 3.89984907560303 4.26655804892942 4.03397093787246 3.48543594956443 2.74417165192995 3.36860806267072 2.14409652582093 0.236278624074597 0.231097457574247 0.235009811729479 0.234734109019206 0.228031949731365 0.234386165456096 0.227821345271223 0.238678344109072 0.23072435520026 0.232577856648998 0.235218113085357 0.227821345271223 0.232196123352691 0.235312839450727 0.227821345271223 0.229878523967359 0.244564576771688 0.239438043075789 0.227821345271223 5 5 - 61490 61811 61670.364 61016 63847 - gene protein_coding_gene TRUE TRUE AT5G01180.1 proton-dependent oligopeptide transport (POT) family protein similar to ATPTR2-B (NITRATE TRANSPORTER 1), transporter [Arabidopsis thaliana] (TAIR:AT2G02040.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G54140.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G62200.1); similar to LeOPT1 [Lycopersicon esculentum] (GB:AAD01600.1); similar to putative peptide transport protein [Oryza sativa (japonica cultivar-group)] (GB:BAD31819.1); similar to peptide transporter [Hordeum vulgare] (GB:AAC32034.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109) 0.0410353644721783 0.401864685866864 0.695781473023573 1 0.126555787089487 4.96362398751406 0.0410353644721783 0.104545997182763 AT5G36160_at 9.39918751876012 9.55682710069535 10.5651764240934 10.5618454641094 10.8465633862640 10.4497245521399 10.8606757559609 10.5880202715947 9.38176524716597 10.4233022638976 10.9280575738264 10.5541593961686 10.4973489816866 10.6990790602921 10.4854286530736 10.5051139212270 10.4578141665310 10.6016745223623 9.87719118239422 0.0862436641311717 0.0842163048291203 0.0839165720238797 0.0830567576728596 0.0868944284818707 0.0921105292317389 0.087131573841473 0.0854001088477055 0.0967351435343185 0.0870653742243229 0.0855213774012488 0.0828454906380564 0.0822475508676491 0.0817828548362882 0.088148183412461 0.0813662786897537 0.0883641543840304 0.0860562270018722 0.0841705843079874 5 5|0 -|/ 14250556 14251336 14250933.333 14250340 14252381 - gene protein_coding_gene TRUE TRUE AT5G36160.1 aminotransferase-related similar to aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT5G53970.1); similar to Os02g0302700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046628.1); similar to Os02g0302400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046626.1); similar to putative nicotianamine aminotransferase A [Oryza sativa (japonica cultivar-group)] (GB:BAD23582.1); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005958); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839) -0.0383806298992924 -0.400122802315629 0.69702536892118 1 0.125856411410628 20.5960879419765 -0.0383806298992924 0.0876762982105793 AT5G55020_at 0.959960508564874 1.08875009192354 1.00990031835428 1.13125016440971 1.03231741061717 1.28412743684765 0.600507240862623 1.24221727670444 1.9233062418755 1.32236456217959 1.23756456436130 1.57627315487970 1.65012107863605 1.53048396295045 1.55559148778087 1.52423108238336 1.84576759351465 1.74999274438934 1.66225388175688 0.204406543653999 0.202997392478194 0.209867058249268 0.208011816384353 0.206703310559959 0.207935430761049 0.203085736642014 0.203694938859223 0.211554753010094 0.206273767953604 0.215540576393453 0.202007136983408 0.205751482162569 0.204417686679778 0.207346612926264 0.202837521445142 0.209094824239323 0.20269151236344 0.203700024962167 5 5 - 22341866 22342377 22342069.455 22341825 22343474 - gene protein_coding_gene TRUE TRUE AT5G55020.1 MYB120 (myb domain protein 120); DNA binding / transcription factor Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB120). similar to MYB97 (myb domain protein 97), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G26930.1); similar to protein 3 [Petunia x hybrida] (GB:CAA78388.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0437612801395389 -0.398993758192933 0.697832129941508 1 0.125404665058453 2.65349285797685 -0.0437612801395389 0.123162482823453 AT5G08590_at 10.1072047670949 10.0340683334696 10.6937428347454 10.7060878989119 10.9343335348043 10.7101800856762 10.2752938195913 10.1552543576900 9.91817371775614 9.95235515140515 10.6020391115978 10.5768659817527 10.7450758813899 10.7649344569387 10.4891545162231 10.7236122376658 10.5890247479206 10.6168451227432 9.8980280003413 0.0890282393212344 0.0888134772753215 0.0901187442061904 0.0880764182669379 0.0869580180987232 0.0972442139066845 0.086621054984797 0.0888199903170378 0.0970250750960281 0.090251527364045 0.0859673410034216 0.0870232957394911 0.0871803985845565 0.0906221391641936 0.0864013249558425 0.0879076953355058 0.0872835757923023 0.087774200518778 0.0907366413290647 5 5|0 +|/ 2784779 2785723 2785407 2783334 2786095 + gene protein_coding_gene TRUE TRUE AT5G08590.1 ASK2 (ARABIDOPSIS SERINE/THREONINE KINASE 2); kinase Encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily. Identical to Serine/threonine-protein kinase ASK2 (EC 2.7.11.1) (ASK2) [Arabidopsis Thaliana] (GB:P43292;GB:Q9FNM9); similar to SNRK2-5/SNRK2.5/SRK2H (SNF1-RELATED PROTEIN KINASE 2-5, SNF1-RELATED PROTEIN KINASE 2.5), kinase [Arabidopsis thaliana] (TAIR:AT5G63650.1); similar to serine/threonine-protein kinase [Fagus sylvatica] (GB:CAE54075.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0335781358058429 0.398800594504497 0.69797019478224 1 0.125327501377685 20.7326688524295 0.0335781358058429 0.0458368133122865 AT5G55720_at 1.03401617901903 0.76272453337056 1.66083002953836 1.33383561032175 1.19591374808295 1.20225739914758 1.29123456141710 1.40740905509683 1.43497266917781 1.42063601736519 1.52639791381023 1.19851462339077 0.839416487455284 1.72140178994230 1.15865273630314 1.28150718494094 1.23317782717298 1.14110982572290 1.31679416970912 0.205448335800474 0.194453285269779 0.197094992489562 0.206890160665212 0.188541267889613 0.193585009688049 0.188541267889613 0.189094897165512 0.194479711121887 0.206022850156824 0.200722772264310 0.192002678691429 0.191022110312834 0.198176321571528 0.193790839536114 0.192892952429783 0.21718501041582 0.204931278572570 0.198440534387081 5 5 + 22573921 22574678 22574331.636 22573273 22574951 + gene protein_coding_gene TRUE TRUE AT5G55720.1 pectate lyase family protein Identical to Putative pectate lyase 21 precursor (EC 4.2.2.2) [Arabidopsis Thaliana] (GB:Q9FM66); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G24780.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT5G63180.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G27400.1); similar to pectate lyase 1 [Musa acuminata] (GB:AAF19195.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectate lyase/Amb allergen; (InterPro:IPR002022); contains InterPro domain Pectolytic enzyme, Pectin lyase fold; (InterPro:IPR012334) -0.0366661511878263 -0.397885781935145 0.698624217951637 1 0.124962549900072 2.56268926483745 -0.0366661511878263 0.0762347066974132 AT5G60130_at 1.59779942389789 2.02744361996394 2.28527474940308 2.06616256332891 1.4075252467869 1.80343268094638 1.09500417211258 2.24129908067376 2.21923169589511 1.83739100129648 2.44877341257423 2.50162358167956 2.6362839457184 2.50522451216536 2.57964293203919 2.27019817051125 2.01744443699661 2.66359543948771 2.30664853830246 0.232049162750642 0.231661655039496 0.237434920075271 0.242842307586643 0.237053099049220 0.231661655039496 0.232026749351758 0.245725324352232 0.239042437882606 0.243442445720753 0.231661655039496 0.234154807720992 0.235861188146990 0.232033536120291 0.232870998127497 0.231661655039496 0.244433260861979 0.244988646520605 0.239417774125188 5 5|0 -|/ 24229127 24229722 24229418.9 24229097 24230184 - gene protein_coding_gene TRUE TRUE AT5G60130.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G60140.1); similar to hypothetical protein PF14_0390 [Plasmodium falciparum 3D7] (GB:NP_702279.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) 0.0635714733082045 0.397481411135443 0.698913394957448 1 0.124801490592979 4.10246205000312 0.0635714733082045 0.225857154858095 AT5G62800_at 1.09710519510717 1.45917483673185 1.51003910353203 2.18475805099516 1.36728566833955 1.69539729455436 1.4824141456005 1.30285344047987 1.15374778363731 1.50936431785142 1.30464491925998 1.26821444871265 1.32089940397351 0.992592352592364 0.94505715944676 1.40742539098895 1.83452429442521 1.23203445668656 1.39721426545650 0.197620014701635 0.192178482888504 0.192706322726064 0.190759651684605 0.187498387385377 0.188222352500695 0.188697159969565 0.192323757407680 0.199973437514988 0.201362551161116 0.200484829778922 0.192765904765808 0.193425941330422 0.196433960716879 0.204377832690973 0.192664500240147 0.198090996066937 0.201590227028742 0.201478988254278 5 5 + 25236465 25237167 25236729.364 25235889 25237193 + gene protein_coding_gene TRUE TRUE AT5G62800.1 seven in absentia (SINA) family protein similar to seven in absentia (SINA) protein, putative [Arabidopsis thaliana] (TAIR:AT5G37890.1); similar to SIAH1 protein [Brassica napus var. napus] (GB:CAB89182.1); similar to SIAH1 protein [Brassica napus] (GB:CAC80703.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain Seven in absentia protein; (InterPro:IPR004162); contains InterPro domain SIAH-type; (InterPro:IPR013323); contains InterPro domain Zinc finger, SIAH-type; (InterPro:IPR013010) 0.0477938431978394 0.396671697132159 0.699492595007327 1 0.124479461467556 2.83318655470547 0.0477938431978394 0.147476629059721 AT5G62110_at 0.556480894932863 0.524202713110859 0.672938114716203 0.758884569639282 0.921579021426085 0.689843909018104 0.699920178098342 0.686558826865285 0.86693232743704 1.16865853569619 0.517525566169492 0.774272780530264 1.02659563559190 0.858221830524899 0.764465402687917 0.852030592450704 0.854959039290367 1.1403006831944 0.80467936168601 0.183275902459695 0.176361597607917 0.179055301193479 0.176361597607917 0.178963541590001 0.177933297196723 0.179961709348766 0.181017875268715 0.178344576838439 0.177292372033907 0.191483875877245 0.182523502023261 0.181226982804741 0.18329446918641 0.180469931538793 0.176361597607917 0.180818550804737 0.182193678274180 0.180117251130127 5 5|0 -|/ 24960141 24961215 24960616.444 24960130 24963307 - gene protein_coding_gene TRUE TRUE AT5G62110.1 similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G26650.2); similar to hypothetical protein DDBDRAFT_0217746 [Dictyostelium discoideum AX4] (GB:XP_643375.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.0331787613648673 -0.396549919453132 0.699579721696447 1 0.12443108462515 1.58645261993158 -0.0331787613648673 0.0431972873888703 AT5G48090_at 2.44682710200268 2.08443221818384 2.54183087356137 2.41391576391617 1.69015489638578 2.74407138213343 2.08704271809056 2.45872731547793 2.21443506584365 2.42968020070648 2.87185148487568 2.64206062164680 2.53835235948219 2.74866749648607 2.73703124074803 2.40529712731845 2.51285519577783 2.49283653823128 2.29699607162704 0.220848902491949 0.219071205676834 0.224960919800563 0.221325987200445 0.222106932736332 0.22436729036233 0.226667066949881 0.224269203398287 0.220977538867586 0.232190711973834 0.228638043492197 0.228911195133384 0.222209579246494 0.216018316377802 0.216018316377802 0.217983784701123 0.225296537447481 0.217224291155564 0.222171603057679 5 5|0 +|/ 19504713 19505585 19505288.875 19502460 19505609 + gene protein_coding_gene TRUE TRUE AT5G48090.1 ELP1 (EDM2-LIKE PROTEIN1); zinc ion binding similar to EDM2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G55390.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01751.1); similar to Os08g0502000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062167.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) -0.0589575825111346 -0.396533613604183 0.699591388174213 1 0.124424608130592 4.77453667745056 -0.0589575825111346 0.204510912049257 AT5G48350_at 1.9560180379105 1.74168673654683 1.90577455912359 2.53603114318636 1.34148411228266 2.05875879630675 1.26182732049190 1.66550348779922 2.28791259260701 1.40387785136926 2.04869506898619 1.56122645204504 1.77583519159749 1.87671097430486 2.18337412267766 2.09482893038117 2.51598856342035 2.10900678875642 2.04486857243060 0.206980973855065 0.202940435396417 0.198939431121926 0.208120146397732 0.208982266200698 0.203691976643798 0.200508896502974 0.205818050743969 0.203015546737397 0.209839697047178 0.197206297557874 0.200929967883806 0.201995677096996 0.203730113593722 0.200201737068558 0.197206297557874 0.200005944195729 0.205988920531816 0.202772277320496 5 5 + 19610852 19611323 19611127.727 19610443 19611667 + gene protein_coding_gene TRUE TRUE AT5G48350.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62320.1); similar to Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] (GB:ABE87673.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) 0.0544542081686992 0.395240535157088 0.700516816289159 1 0.123911833761674 3.77484949103436 0.0544542081686992 0.183192784114792 AT5G64490_at 0.677210824858958 0.784569034556227 0.631348026883518 0.650394264263481 0.931661535495881 0.651779376830832 0.884265094762225 0.194102452103619 0.604501545344147 0.323210608593111 -0.00729663471019876 0.524403235778873 0.686969992813622 0.584344605742676 0.313094392632064 0.141792486228107 0.878360857451189 0.768395770857094 0.740559989512335 0.203449132231235 0.198484759139904 0.203787696263423 0.198484759139904 0.198484759139904 0.201879252052050 0.203199347141568 0.205314912597120 0.201918829318401 0.20523877335434 0.204347551305581 0.200606647934932 0.199583515299011 0.202406915099892 0.202908271701161 0.198484759139904 0.204959631156975 0.207861256318033 0.201277771208318 5 5 - 25796969 25797399 25797195.273 25796536 25797534 - gene protein_coding_gene TRUE TRUE AT5G64490.1 binding similar to APUM22 (ARABIDOPSIS PUMILIO 22), RNA binding / binding [Arabidopsis thaliana] (TAIR:AT1G01410.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.0443372751219088 -0.393287430452758 0.701915577841801 1 0.123140400620286 1.19684072763553 -0.0443372751219088 0.130257067193658 AT5G58100_at 7.33412463971787 7.37238743911972 8.47218826353966 8.14241183729739 8.61032587507229 8.18325996657362 7.6504296553804 7.41011524000869 7.14885766518706 6.37259616148373 7.44888521100408 7.83612418668652 7.78750998814154 7.78697990416157 7.53952542113742 7.73951906032121 7.54420224623675 7.79576992267038 6.6484660314241 0.208628985050105 0.202493439952208 0.203086185818829 0.206665262388152 0.209300466006177 0.203972638777987 0.208966958249104 0.207252556114601 0.215706153000016 0.21834034239457 0.198488950545738 0.198209738097162 0.206419791350553 0.204493673460058 0.20607218603857 0.198209738097162 0.213583204588367 0.198209738097162 0.215227866923380 5 5 + 23531007 23532038 23531410.6 23524928 23532246 + gene protein_coding_gene TRUE TRUE AT5G58100.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28720.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19375.1); similar to Os02g0469200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046826.1) -0.0397161117706679 -0.392067202461477 0.702790061419836 1 0.122660317326682 15.1009659205437 -0.0397161117706679 0.102432112655074 AT5G10270_at 5.30573571399067 4.83607044553372 6.27432841918822 6.16271515465259 6.49912610471425 6.43974255682145 5.08985898264804 5.10825763803271 4.92129058639441 4.66942475540998 5.92957888175102 5.51645806200701 5.75514213488949 5.66314389495735 5.36405200339915 5.6307464929964 5.89108848025981 5.51995573670605 5.04332147916582 0.238532656615147 0.24482492992014 0.250671379668563 0.237471322966482 0.248554169328909 0.249645809047890 0.244991630675661 0.242655763310007 0.259123027320553 0.248190350907172 0.242632135155964 0.236814335517167 0.237712284102828 0.249708591036400 0.243538494998332 0.237678439947861 0.250476217760973 0.236814335517167 0.236912144676433 5 0|5 /|- 3221792 3222160 3221948 3221608 3224766 - gene protein_coding_gene TRUE TRUE AT5G10270.1 CDKC;1 (CYCLIN-DEPENDENT KINASE C;1); kinase similar to CDKC,2 (CYCLIN-DEPENDENT KINASE C,2), kinase [Arabidopsis thaliana] (TAIR:AT5G64960.1); similar to cyclin dependent kinase C [Solanum lycopersicum] (GB:CAC51391.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0370408832879949 0.390941460573877 0.703597231379115 1 0.122218690892795 10.9828708692115 0.0370408832879949 0.0842312180349857 AT5G43270_at 5.73963217049771 5.01181638579258 7.52710768815688 6.64772947445861 8.60984187465368 7.53287917170093 8.03777424446072 6.9615771091422 6.82240368641802 6.94958454001822 9.11096619771119 8.04095142384315 8.08737787699438 8.69861374077141 7.21805619386832 8.04375987011774 7.17956752539298 7.36837812408686 8.03647722783233 0.220186172120850 0.223873489738291 0.210344514594630 0.211729466899036 0.212748005761144 0.225684679370520 0.206687078223852 0.209466232168569 0.232211405049406 0.210250330378420 0.206687078223852 0.206687078223852 0.213948567903468 0.213853742392357 0.210442382815566 0.206687078223852 0.225009174547049 0.207384103097885 0.207493343514018 5 5 - 17377863 17378588 17378225.273 17377529 17381001 - gene protein_coding_gene TRUE TRUE AT5G43270.1|AT5G43270.2|AT5G43270.3 SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor|SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. The genes are characterized by the presence of the SBP-box, which encodes a protein domain, the Identical to Squamosa promoter-binding-like protein 2 (SPL2) [Arabidopsis Thaliana] (GB:Q9S840;GB:Q9SMY0); similar to squamosa promoter-binding protein-like 10 (SPL10) [Arabidopsis thaliana] (TAIR:AT1G27370.4); similar to putative squamosa promoter binding protein 2 [Oryza sativa (japonica cultivar-group)] (GB:BAD10252.1); contains InterPro domain SBP; (InterPro:IPR004333) -0.0847312938365676 -0.389631471616568 0.704536991171556 1 0.121706334626227 14.6275184417851 -0.0847312938365676 0.329307647143263 AT5G53520_at 0.502854588418002 0.474379543169244 0.879113063240612 0.0116138608095179 0.530299515933711 0.759343957292123 0.70900127933807 0.274264937621795 0.896109486197513 0.732092283446697 0.408904899513299 0.735802683166963 0.664418924812972 0.94410389626401 0.660711203224579 0.729891352256732 0.94769504963905 0.404586304182552 0.603816126137212 0.192284367541583 0.19037566124345 0.195657926483769 0.197477982006514 0.19037566124345 0.194724137878031 0.192453579668473 0.197369358557014 0.202734606872401 0.191262987946973 0.192601043615660 0.192739548687277 0.197463478962778 0.19037566124345 0.190955802911867 0.194921204099207 0.198817793772363 0.204758226625787 0.203535172970192 5 5 + 21762608 21763072 21762839.364 21760676 21763207 + gene protein_coding_gene TRUE TRUE AT5G53520.1 ATOPT8 (oligopeptide transporter 8); oligopeptide transporter oligopeptide transporter Identical to Probable oligopeptide transporter 8 (AtOPT8) (OPT8) [Arabidopsis Thaliana] (GB:Q9FJD1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT9 (oligopeptide transporter 9), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G53510.1); similar to ATOPT6 (oligopeptide transporter 6), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G27730.1); similar to isp4 protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAB89477.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE92893.1); similar to Peptidase aspartic, active site; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE84685.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -0.0514878476792286 -0.388568906176207 0.705299634637477 1 0.121291974327585 1.23311897042438 -0.0514878476792286 0.172606107760297 AT5G48840_at 6.54094935859612 6.699875057633 7.87512736306368 7.70872758720047 7.92109639083969 7.36424518434475 7.39123149087866 7.0597048864647 5.401345110908 5.91063049410238 6.5073056869396 7.14977985393835 7.29427940457592 6.75246088904928 6.40193216328425 6.9741704752638 7.04548364683629 6.70791070054635 5.63655324373077 0.235982687916815 0.233291534846958 0.239368716385536 0.233291534846958 0.239145717500941 0.238029749669455 0.238560234109667 0.235398856521597 0.259313281706874 0.254030299241654 0.245402779771665 0.238837202413438 0.233291534846958 0.23383242063895 0.238990227999691 0.240503603873226 0.236102625278074 0.239206504524695 0.246325439652885 5 5 - 19821049 19821894 19821487.273 19820783 19822303 - gene protein_coding_gene TRUE TRUE AT5G48840.1 PANC (Arabidopsis homolog of bacterial panC); pantoate-beta-alanine ligase Identical to Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate synthetase) (Pantoate-activating enzyme) [Arabidopsis Thaliana] (GB:Q9FKB3;GB:Q682X9); similar to Pantoate--beta-alanine ligase precursor (Pantothenate synthetase) (Pantoate-activating enzyme) (GB:O24035); contains InterPro domain Pantoate-beta-alanine ligase; (InterPro:IPR003721) -0.041928770086666 -0.388472444747558 0.705368885497293 1 0.121254412355893 13.5719571492783 -0.041928770086666 0.119010715078629 AT5G51050_at 5.85826101068708 6.0563832185333 6.66486476836718 7.0130741475702 6.71196790525848 6.53125829846682 6.01605629153084 5.93564768147231 5.21040065093272 5.16499654631357 6.3841075227761 6.96793964380837 6.47666294821507 6.43905833575603 6.44451757284213 6.92549008301248 6.37415131326022 6.56036141981699 5.19306609465925 0.188830726879024 0.184659184347800 0.185609499084035 0.184137385632523 0.183061390743253 0.181825041910864 0.185592233053198 0.189951946660545 0.193288959732893 0.191940403365540 0.183401901748310 0.179995516563334 0.189563842275979 0.185268039167820 0.193287514889034 0.179995516563334 0.185670360524686 0.180794229516228 0.185789182191052 5 5 + 20772223 20772868 20772457.909 20770607 20772940 + gene protein_coding_gene TRUE TRUE AT5G51050.1 mitochondrial substrate carrier family protein similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G61810.1); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G07320.1); similar to putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-group)] (GB:BAD15855.1); similar to Os06g0604500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058018.1); similar to Calcium-binding EF-hand; Adenine nucleotide translocator 1 [Medicago truncatula] (GB:ABE80214.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) 0.035838372594177 0.387469037272368 0.706089410176376 1 0.120864223048771 12.228951099688 0.035838372594177 0.0773195548350728 AT5G47010_at 7.38079916968106 7.259943455733 7.99632283036369 8.15869428787383 8.57075153752395 7.96069031337169 7.33507076727089 6.68163834797372 7.35561927040005 6.75116194340768 7.85438943718562 8.26820563495061 8.07410601451777 8.22107317660822 8.19239004713777 8.44308038354344 7.9566559103935 8.23243283923815 7.31569676916006 0.170562742918000 0.156837448074930 0.162150965937325 0.157650372632668 0.161705548006429 0.161779047210261 0.176914909606145 0.167535580842942 0.168377439757171 0.162859662860764 0.157241072423403 0.153175912009258 0.153175912009258 0.167845144377196 0.158354744555655 0.156746879646475 0.172911809325983 0.153175912009258 0.164614461698233 5 5|0 +|/ 19094859 19096029 19095509.875 19089236 19096561 + gene protein_coding_gene TRUE TRUE AT5G47010.1 LBA1/UPF1 (LOW-LEVEL BETA-AMYLASE 1); RNA helicase Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. Identical to Regulator of nonsense transcripts 1 homolog (EC 3.6.1.-) (ATP- dependent helicase UPF1) (UPF1) [Arabidopsis Thaliana] (GB:Q9FJR0;GB:Q8S3K7); similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G03270.1); similar to PREDICTED: similar to regulator of nonsense transcripts 1 [Bos taurus] (GB:XP_612154.2); similar to type 1 RNA helicase pNORF1 (GB:AAC51140.1); similar to putative type 1 RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD30435.1); contains InterPro domain Type III restriction enzyme, res subunit; (InterPro:IPR006935) 0.0486588746323917 0.387030233103767 0.706404600798344 1 0.120693895434747 15.3160476761087 0.0486588746323917 0.158618474078735 AT5G48310_at 2.23786751526424 2.39672167544334 2.41297809360498 2.33985437201732 2.21506017229996 2.52452599307341 2.6403561470527 2.20481976556534 1.95773590948709 2.52577089482035 2.62414520896885 2.84864658094626 2.84326437369653 2.57181140158757 3.46884103736291 2.43354600102555 2.67585625102465 2.60446785382809 2.02403990275762 0.224726568107771 0.217016200425074 0.217862720528703 0.217316221774354 0.217743702557049 0.215930077590232 0.219402746507872 0.217884107539908 0.221524991786315 0.221030439617730 0.214023640413926 0.216585143449526 0.214023640413926 0.219662342690473 0.214023640413926 0.226731381548435 0.219661395727708 0.214023640413926 0.224792732040675 5 5|0 -|/ 19592220 19592916 19592544.4 19592085 19597588 - gene protein_coding_gene TRUE TRUE AT5G48310.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24610.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65440.1); similar to Os02g0760200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048187.1); similar to Os02g0198400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046207.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD19403.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.0383364311886981 0.385820275813845 0.707274005601966 1 0.120225204578012 4.83552525391186 0.0383364311886981 0.0972873174699021 AT5G41850_at 4.04345647019896 4.38072718616118 5.20070408972256 4.80484021862064 4.6813586332063 3.63097077355055 4.22234413963696 3.57682270059359 2.75309189888197 3.65661194450960 3.97777636126847 3.92760955748116 4.11745937139879 4.41438935929985 4.63402416530832 4.69513286121457 4.32891762694095 4.48649392751119 3.91537275668938 0.191768728494110 0.199710682675010 0.193816009661578 0.20236493332536 0.196592958625486 0.201069865129478 0.198562950154693 0.192986790787437 0.223071855233275 0.191005851335358 0.194158159527159 0.193056707735453 0.206442782554042 0.195494425104069 0.193480147026093 0.196858631779213 0.202209363119371 0.194734984870390 0.191256644570506 5 5|0 -|/ 16773929 16774905 16774250.667 16773926 16775448 - gene protein_coding_gene TRUE TRUE AT5G41850.1 similar to Os05g0214400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054927.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT47105.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) -0.0627999836125691 -0.385298331116123 0.707649179987744 1 0.120023462907064 8.19986182837629 -0.0627999836125691 0.231561905245874 AT5G62220_at 6.09703413056374 6.44196474022694 7.02676247777581 7.39606158130927 7.98026394986328 7.949812213909 8.446524133119 8.72225835432083 8.57752446757172 7.63272276805448 10.1664843398847 9.89436698563315 9.61082030422669 9.72865793159847 10.1875788881278 9.55538819985832 8.7929033083661 9.41529409872982 8.2076706305472 0.1402283805693 0.160906515669766 0.144092673011702 0.151125885581111 0.137286309912960 0.142952798892194 0.139847798346094 0.137488678649324 0.143268221109795 0.153644954530471 0.146485591925958 0.142277794216493 0.141164422100352 0.149217335121230 0.146575244504288 0.140051576722705 0.143521671226937 0.138944435368600 0.145024171861887 5 5 - 25005775 25006220 25006048.545 25005682 25007235 - gene protein_coding_gene TRUE TRUE AT5G62220.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G13990.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE79352.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) -0.0385792473637809 -0.384691371809919 0.708085565381021 1 0.119789194734008 16.4117065538581 -0.0385792473637809 0.0997605160582118 AT5G54150_at 1.19448629790723 1.11082025870552 1.05310052008176 1.28047261348098 1.51719129507219 1.48428861640645 1.56204770498481 1.22930328663247 1.36445718703 1.30864444809094 1.29405965474750 1.30627874860319 1.43869258656666 1.04440083447356 0.879839621417393 1.48405759176735 1.27578687468197 1.35048390638804 0.98869521310145 0.188944909860839 0.193712119102845 0.199610430532045 0.190170288979853 0.188683147822353 0.186715469499038 0.186715469499038 0.186715469499038 0.198009950682279 0.189398524021080 0.186715469499038 0.190576568229698 0.191302893615815 0.193028214275609 0.190948639561142 0.193174419560732 0.203328665044469 0.191721274965915 0.194852990866870 5 5|0 -|/ 21993710 21995346 21994324.7 21993691 21995463 - gene protein_coding_gene TRUE TRUE AT5G54150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27660.1); similar to hypothetical protein MtrDRAFT_AC119415g7v1 [Medicago truncatula] (GB:ABE85160.1) -0.0348688346186975 -0.384468753893187 0.708245648512052 1 0.119703360700877 2.54386328752801 -0.0348688346186975 0.0714570156992573 AT5G15940_at 0.955363603602096 1.44422973376404 1.40658223896467 1.60036296345026 1.36614305519647 1.13669358791845 1.09248929080000 1.17778387931382 1.64254852055249 1.47827980735101 1.20502164237322 1.71985995111789 1.40193080021589 1.85135028543423 1.80012669859317 1.86917566900432 1.81975972923841 2.42418910827999 1.93453382352797 0.194411275648652 0.2006886052686 0.195216072219986 0.198479564926932 0.198119951290245 0.196892976267454 0.194580479283072 0.195675679792315 0.194411275648652 0.206830502227778 0.204328588370452 0.198963671702115 0.194859080375375 0.198620874703142 0.203970010857874 0.199468042474247 0.194411275648652 0.206232911392142 0.196949985035300 5 5|0 +|/ 5203810 5204412 5204183 5202858 5204878 + gene protein_coding_gene TRUE TRUE AT5G15940.1 short-chain dehydrogenase/reductase (SDR) family protein similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G04070.1); similar to ALTE [Homo sapiens] (GB:AAQ89208.1); similar to Os09g0346600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062940.1); similar to DHRSX protein [Homo sapiens] (GB:AAH19696.2); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347) 0.0385282771764831 0.383289371640117 0.709093981375373 1 0.119249434764594 2.99572977046421 0.0385282771764831 0.100381146080440 AT5G46110_at 13.2386002498258 13.3091405347527 13.5184998297039 13.5510335087797 13.5832877036436 13.5820125326444 13.4664316341639 13.6661809002379 13.8199328256066 13.6417200022900 14.4899368061312 14.36824001639 14.2720376631411 14.3296096190583 14.1698378175243 14.2496459352872 13.9018762130668 14.3044190694796 13.6026644384655 0.0557287882434068 0.0537576750474832 0.0601319784412947 0.0542288275517315 0.0541143083958606 0.0568295999013442 0.0537576750474832 0.0557789036069457 0.059544983422448 0.0563608779849531 0.0537576750474832 0.0540689216262868 0.0537576750474832 0.0543162075763857 0.0537576750474832 0.0537576750474832 0.0587890409264712 0.0537576750474832 0.0569268750012392 5 0|5 /|+ 18716443 18717017 18716708.167 18714462 18717883 + gene protein_coding_gene TRUE TRUE AT5G46110.1|AT5G46110.2|AT5G46110.3|AT5G46110.4 APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); antiporter/ triose-phosphate transporter|APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter|APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (GB:P52177); similar to triose phosphate/phosphate translocator precursor [Mesembryanthemum crystallinum] (GB:AAF86906.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696)|similar to GPT1 (glucose-6-phosphate transporter 1), antiporter/ glucose-6-phosphate transporter [Arabidopsis thaliana] (TAIR:AT5G54800.1); similar to Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (GB:P52177); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853); contains InterPro domain Tpt phosphate/phosphoenolpyruvate translocator; (InterPro:IPR004696) -0.0314917527432357 -0.381471263862343 0.710402562070217 1 0.118552325394128 27.4638014357009 -0.0314917527432357 0.0370901676325604 AT5G61040_at 4.85083900241997 5.07894631513337 5.80976206907856 5.60103038970028 6.78969126949334 6.40357384797547 5.30745483827383 4.9885100180143 4.42832575119722 4.82393977377887 5.40895886785356 5.79503768733538 5.5813073055282 5.49908887702547 5.43796732589246 5.96462578493322 6.05213254929077 5.0922433421948 4.78618394206862 0.230555241966009 0.232914681362844 0.232335952109619 0.231846915403630 0.232755275574876 0.231831889366149 0.230202452720164 0.230553756178900 0.239522312823923 0.233382394401862 0.230975874480437 0.230202452720164 0.233148390664863 0.243957067679583 0.234243606824551 0.230202452720164 0.236362288952298 0.230202452720164 0.232457405729167 5 5 - 24579703 24580206 24580018.727 24579559 24582185 - gene protein_coding_gene TRUE TRUE AT5G61040.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08010.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99007.2) 0.0385071066549265 0.380960824328856 0.71077012665605 1 0.118357188301939 10.7454276553553 0.0385071066549265 0.101854735958596 AT5G27460_at 5.14134902490381 4.86259509198423 6.12064130793122 6.08502812026199 6.46895372232368 5.6029677675476 4.69965357810752 4.93005481086146 5.28617965147271 5.30776015770442 6.1931986858434 6.31312575667425 5.99979685256756 6.2798610557575 5.72824882469639 5.91353206842176 5.18443563625077 5.52543313590733 4.94781459552805 0.193485804787628 0.194495906324695 0.200052986786149 0.206867890535471 0.203767555166818 0.200961443457128 0.193401495330608 0.200173397628824 0.205378302198028 0.194889620850258 0.197084969008954 0.195403040021761 0.195373383615943 0.201501183696296 0.197970531030291 0.198642067859318 0.204935060233315 0.20068437312221 0.196478562393207 5 5 - 9693344 9693750 9693526.636 9693265 9694843 - gene protein_coding_gene TRUE TRUE AT5G27460.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G02150.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABD28679.1); similar to Os12g0527900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066910.1); similar to Os02g0796400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048388.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) -0.0485855382591167 -0.380779440020019 0.710900759048712 1 0.118287907577108 11.0252998297818 -0.0485855382591167 0.162522973104060 AT5G16220_at 6.62600256661711 7.35682858035089 7.60167923215436 7.78096468501555 8.15692072447396 8.0583222024936 6.99120767573633 7.08386063561813 6.5773783179933 6.12338075548462 7.59790466022878 7.4055287458798 7.64282531443255 6.9942279149362 7.63162659398043 7.35051996094435 7.18757346215014 7.64408417969821 5.84900104871155 0.185430327425072 0.180488773175089 0.183040283737109 0.177361284205739 0.190554202230216 0.182311802728525 0.187044610887334 0.182776318210126 0.194516257049991 0.194057166928946 0.180245400206486 0.177572946093520 0.183112033234707 0.182880334794066 0.17791497231248 0.177667127475190 0.180339269798914 0.178151078542446 0.198079992615737 5 5 - 5298632 5299154 5298926.909 5298306 5300613 - gene protein_coding_gene TRUE TRUE AT5G16220.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G01190.1); similar to Os01g0139200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041976.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD61300.1); contains InterPro domain Octicosapeptide/Phox/Bem1p; (InterPro:IPR000270) 0.0432049021697178 0.380205231219934 0.711314366587489 1 0.118068796657624 14.2644931518547 0.0432049021697178 0.132311147035832 AT5G19940_at 12.1136948439917 12.2938015239127 12.5079449226058 12.585665327058 12.7676095239801 12.7065130949137 12.5297023350440 12.6113813545078 12.5304836241147 12.3966299616194 13.1551398699787 13.1422476986625 13.0826484511384 13.0593184026588 13.0673869110449 13.2154218791339 12.6583407488068 12.9489473730804 12.4087376623254 0.0645596416067615 0.0645596416067615 0.0683027652189326 0.0648859513237643 0.0655669169673721 0.0662734480752693 0.0658179900519781 0.0655513743704293 0.0690953486763409 0.0672841838493336 0.0658478009158953 0.0655720972815584 0.0654261334251567 0.0659172604990804 0.066570629579382 0.0645596416067615 0.0702730938494962 0.0683796642755373 0.0667219611796557 5 5|0 +|/ 6739832 6740256 6740030.667 6739626 6740959 + gene protein_coding_gene TRUE TRUE AT5G19940.1 plastid-lipid associated protein PAP-related / fibrillin-related similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to PAP fibrillin [Medicago truncatula] (GB:ABE82162.1); similar to OSIGBa0113I13.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66782.1); similar to Os04g0607000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053805.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) -0.0313733200524364 -0.379109663320702 0.712103783979035 1 0.117651632483487 25.2577716988348 -0.0313733200524364 0.0382615656120351 AT5G59200_at 1.614444581374 1.66487355067065 1.77144184547542 1.83836086357127 1.87035855650826 2.05171427031096 1.79079801289893 1.65281947495077 1.74636421403722 1.84973307632618 1.80349076729339 1.36815235852248 1.75657863858898 2.03322467840541 1.98510619901154 1.93052263887318 2.1037905205862 2.2335387244401 2.03622263464329 0.177711609872162 0.181590368709043 0.177711609872162 0.181626520946136 0.177711609872162 0.183248734459543 0.177711609872162 0.179312900552526 0.177711609872162 0.179451086510399 0.184286681391255 0.178616172341008 0.177711609872162 0.178566161881333 0.188689046231266 0.177711609872162 0.180063125338582 0.178015136026412 0.177711609872162 5 5 - 23906105 23906568 23906353.364 23906019 23907791 - gene protein_coding_gene TRUE TRUE AT5G59200.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G37380.1); similar to Os07g0113500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058748.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE93365.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0315203831590811 -0.377756620617695 0.713079214901231 1 0.117138042313355 3.67147166482873 -0.0315203831590811 0.0420167343147214 AT5G39830_at 8.64091664055188 8.44183700107434 9.11839696662808 8.97153569156838 9.73470721183582 9.1107886183086 9.32094904411178 8.66335376365101 7.85668748420206 8.3852521174798 9.10905355278582 9.5529639043636 9.38140152636132 9.43790143948068 9.55980616793689 9.66986922512316 9.50321309204145 9.0571195239192 8.37366927765332 0.129003145659464 0.125890007895286 0.129671316567482 0.129038877186143 0.126523639750894 0.131558264087625 0.130761611042664 0.128297997945581 0.140877212777172 0.135006314043925 0.127780919319212 0.128634629648825 0.130482453042684 0.130721948266490 0.136110971726638 0.128827009922137 0.129428971237402 0.125386610944657 0.132481151211207 5 5|0 +|/ 15961878 15962618 15962201 15960025 15963053 + gene protein_coding_gene TRUE TRUE AT5G39830.1|AT5G39830.2 DEGP8 (DEGP PROTEASE 8); serine-type peptidase/ trypsin Encodes a putative DegP protease. Identical to Protease Do-like 8, chloroplast precursor (EC 3.4.21.-) (DEGP8) [Arabidopsis Thaliana] (GB:Q9LU10); similar to DEGP1 (DEGP PROTEASE 1), serine-type peptidase [Arabidopsis thaliana] (TAIR:AT3G27925.1); similar to OSJNBa0072F16.5 [Oryza sativa (japonica cultivar-group)] (GB:CAD40980.2); similar to Peptidase S1 and S6, chymotrypsin/Hap [Medicago truncatula] (GB:ABE84843.1); contains InterPro domain Peptidase S1C, HrtA/DegP2/Q/S; (InterPro:IPR001940); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro domain Peptidase, trypsin-like serine and cysteine; (InterPro:IPR009003) 0.0481621723332397 0.377340911058527 0.713379015044254 1 0.116980604835817 17.8073701241062 0.0481621723332397 0.162607571476733 AT5G48080_at 1.48939564212160 1.81917487809350 2.72605257825565 2.67321259247722 1.85954808556042 2.41537527396147 1.65247434056454 2.30890363217032 2.38013657693918 2.11033397911768 1.56359456946143 2.09878200847539 2.40284091874576 1.80492257712654 1.61983759847844 1.80558291466909 2.06208993553924 2.74330627174403 1.94767377718693 0.199054616722277 0.192547226157535 0.195065419842645 0.198218632833928 0.191816192770954 0.201008862901749 0.196729431674278 0.193161405333698 0.198147168350213 0.193486710537671 0.198080225671559 0.190576364700381 0.195490662929350 0.194783289176226 0.200781737944397 0.194679472787392 0.200931596006738 0.198032099113611 0.196155707028343 5 5 + 19501535 19502150 19501837 19501391 19502198 + gene protein_coding_gene TRUE TRUE AT5G48080.1 similar to EDM2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G55390.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD01749.1); similar to Os08g0337300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061580.1) 0.0475291031254104 0.376527365061349 0.713965872572843 1 0.116672986120415 4.19735098308122 0.0475291031254104 0.159678888372006 AT5G06370_at 8.57843586475142 8.77875132126388 9.34267647160786 9.48169577475554 9.6950559239674 9.45681781546634 8.5112029071248 8.6793100618482 7.27333893990073 8.02259314795404 8.44209021287736 8.436733649039 8.7739055431366 8.32474160884988 8.25848191603129 8.40579568566762 8.96321360638676 8.26005250522518 7.94731014487772 0.150075126113195 0.157002617751087 0.156942889649801 0.156421179326173 0.156071933963260 0.166668364984668 0.148983897166038 0.150958596806362 0.188617995483286 0.151433719024087 0.159153792736996 0.146892793024457 0.149801785749996 0.159803415900801 0.156400942566784 0.156927582777531 0.165879463887395 0.157794042825219 0.153066456757603 5 5 - 1947306 1947838 1947618 1947140 1948613 - gene protein_coding_gene TRUE TRUE AT5G06370.1 NC domain-containing protein similar to NC domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G02700.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAU90086.1); contains InterPro domain NC; (InterPro:IPR007053) -0.0334851940985053 -0.376009739915759 0.714339366472355 1 0.116477597074808 17.1809303935044 -0.0334851940985053 0.0657767233524358 AT5G64660_at 3.40887449441153 4.04716835179069 4.16888363151733 4.73864385621842 4.46334707843202 4.16783528038086 3.48264274320794 3.32066469837412 3.71467083253272 3.38000681208051 4.71512662882373 4.08619677291943 4.14553766337495 3.86545189558040 4.57873771214761 4.14492111539350 3.65300098115942 4.04703447099948 3.25493181983798 0.220510480693069 0.226701762020507 0.225852258135862 0.237293228170407 0.235399146055190 0.233890556769919 0.226932703964764 0.229967405836643 0.229306940030152 0.242526495655538 0.227911546263094 0.228194451990140 0.22791863338245 0.239433012363475 0.227761134420503 0.221717885978026 0.233969692908496 0.223513691320576 0.228504241866733 5 5 - 25859368 25859918 25859675.273 25859139 25860678 - gene protein_coding_gene TRUE TRUE AT5G64660.1 U-box domain-containing protein similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09800.1); similar to U box [Medicago truncatula] (GB:ABE81171.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) 0.0471086789141016 0.373965421327273 0.715815216985499 1 0.115708477088711 7.77694288005839 0.0471086789141016 0.159135960655118 AT5G51480_at 2.35078478938809 2.56516386209076 2.7727036763909 2.67308236724422 2.21057855857115 2.57754512122246 2.24389189765601 2.08800880931625 2.52916704709515 2.38555019290065 2.73561022016044 2.49591417071557 3.15460317106874 2.59637330719072 2.92615111108260 2.528368264587 2.75352330357844 3.01674363316708 2.62719503113106 0.19331917662217 0.202076426936815 0.195485186732514 0.187888754324963 0.191106062630743 0.192474335203924 0.197896696686571 0.189835071885323 0.190791267408801 0.200894969301129 0.192366846772709 0.192177864159106 0.195449571048673 0.187888754324963 0.197571241307023 0.188619817056653 0.199266175580973 0.190923000159181 0.19242909470149 5 5|0 +|/ 20929508 20930337 20929934.667 20927470 20930677 + gene protein_coding_gene TRUE TRUE AT5G51480.1 SKS2 (SKU5 SIMILAR 2); copper ion binding Identical to Monocopper oxidase-like protein SKS2 precursor (SKS2) [Arabidopsis Thaliana] (GB:Q9FHN6); similar to SKS1 (SKU5 SIMILAR 1), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G25240.1); similar to SKU5 (skewed 5), copper ion binding [Arabidopsis thaliana] (TAIR:AT4G12420.1); similar to SKS3 (SKU5 Similar 3), copper ion binding [Arabidopsis thaliana] (TAIR:AT5G48450.1); similar to C-terminal peptide-binding protein 1 [Zea mays] (GB:BAE95064.1); similar to Os06g0104300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056550.1); similar to putative pectinesterase [Oryza sativa (japonica cultivar-group)] (GB:BAC55686.1); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.0348846520689566 -0.373415188497147 0.716212653872455 1 0.115502162874771 5.08016071260304 -0.0348846520689566 0.0802135505052569 AT5G01880_at 6.72668628636372 6.63380110493961 7.90078897659196 7.57746975589212 8.64208325932372 8.57229835930564 7.15011782232635 6.98383879336772 6.51276677637938 6.36098623329253 6.90349604885196 7.07410609920646 7.895394278977 7.398211398537 6.82899838274786 7.76884617706185 7.83415316876989 6.98331851115327 6.74801517513862 0.178606057964083 0.174681228892151 0.174980818121316 0.171828447572923 0.176710744854696 0.18239562891596 0.176872756626613 0.174331326860714 0.182443159101532 0.189804176220908 0.171336545117082 0.171336545117082 0.171336545117082 0.174032762176865 0.171336545117082 0.171336545117082 0.171336545117082 0.179802969126801 0.178382121763308 5 5 + 339014 339437 339254.091 338896 340250 + gene protein_coding_gene TRUE TRUE AT5G01880.1 zinc finger (C3HC4-type RING finger) family protein Identical to RING-H2 finger protein ATL5A (ATL5A) [Arabidopsis Thaliana] (GB:Q9LZV8); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G10910.1); similar to Zinc finger, C3HC4 type family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96288.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.0331682796273154 0.372129387447145 0.717141740432969 1 0.115021192931692 14.4615879963139 0.0331682796273154 0.0660519576529281 AT5G39720_at 2.69998826388312 2.58755430677813 3.27423925689883 2.86860853794627 2.29097726259249 2.97744688998737 2.31951412361574 2.35201485405485 2.35419799563983 2.30796967106361 2.49626673422759 2.64588638953737 2.58288280237906 2.71426238557429 2.26264061994802 2.63796148912437 2.69037035471406 2.95313020603785 2.25700939765919 0.232089514614837 0.241313499502997 0.230085004742995 0.240663729028042 0.233390786159349 0.230060165818287 0.239307576285417 0.232310498622423 0.234378785667552 0.227433209280153 0.234384450946028 0.235400541691640 0.234724281434935 0.232189810346927 0.244228800222441 0.241233819809855 0.243974070339424 0.236736676134894 0.228915115379875 5 5 + 15916953 15917720 15917285.545 15916874 15917881 + gene protein_coding_gene TRUE TRUE AT5G39720.1 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related Identical to AIG2-like protein [Arabidopsis Thaliana] (GB:Q9FIX2;GB:Q58CN3;GB:Q680A3); similar to avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related [Arabidopsis thaliana] (TAIR:AT5G39730.1); similar to Os06g0702700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058493.1); similar to Os02g0141000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045856.1); similar to AIG2-like [Frankia sp. CcI3] (GB:YP_479673.1); contains InterPro domain AIG2-like; (InterPro:IPR009288) 0.0434264212042884 0.371722308078882 0.717435985637371 1 0.114869255995011 5.13595167570978 0.0434264212042884 0.139464722609288 AT5G22320_at 5.41242327204693 5.43028927108484 6.50962940041385 6.45409513194002 6.58852134850031 6.1622447436045 5.17487016866556 4.60105083858746 5.3077299481658 5.15920091791285 5.9915945719984 6.51608845983722 6.43106602539262 6.30394313018319 5.49091563539009 6.27692400644864 5.99249090918336 5.52817292472853 5.27768387222136 0.187918676691552 0.188508704644366 0.194925637037958 0.192917675932690 0.189288030141157 0.197250993610990 0.187479695883835 0.199325879486832 0.185151896869639 0.190127676469122 0.187175965933460 0.185028677293405 0.184831863296442 0.186299977117166 0.186667048693998 0.183068987772106 0.18717143596848 0.196214584044375 0.183736736674178 5 5 - 7388196 7388751 7388463 7388007 7390488 - gene protein_coding_gene TRUE TRUE AT5G22320.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT4G35470.1); similar to hypothetical protein DDBDRAFT_0188882 [Dictyostelium discoideum AX4] (GB:XP_635732.1); similar to Os01g0966400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045502.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, SDS22; (InterPro:IPR007092) 0.0408043437911323 0.370663506145228 0.718201534286354 1 0.114474829632102 11.4489427071864 0.0408043437911323 0.124115743067220 AT5G15120_at 1.99419837032065 2.14110181020009 2.49962977295963 2.21223421374031 2.05639363596746 2.49984926785835 2.22067811688868 1.97609348562242 2.00835371041637 2.41000451351702 2.30723759935290 2.18961071333847 2.37476971697526 2.2241980373583 2.25838457888157 2.38896607246143 2.55907717058346 1.96787506501803 2.09980908985382 0.202600470853686 0.200763016228899 0.199934309123145 0.201844449641368 0.2010689789722 0.198753292275665 0.202428167050024 0.198753292275665 0.207235988428245 0.209358818199140 0.206656971533389 0.199267391423911 0.211957016709808 0.210349726481278 0.199103465839755 0.199939152039661 0.211572733162302 0.201366311658470 0.203439965821301 5 5 + 4899227 4900090 4899696.727 4898740 4900584 + gene protein_coding_gene TRUE TRUE AT5G15120.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39890.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAB03364.1); similar to Os01g0185500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042241.1); contains InterPro domain Protein of unknown function DUF1637; (InterPro:IPR012864); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051) -0.0376435431860402 -0.369513995198504 0.719033036125445 1 0.114047851082555 4.42826598778232 -0.0376435431860402 0.103926690975215 AT5G53980_at 0.594946796248318 0.63291729086367 0.671325105363154 0.803015109180887 0.520868588328718 0.774920028318947 0.412858771407876 0.689826692154801 0.914107762081464 1.06094973304576 1.00778056753699 0.907008858148571 0.937871988851142 1.07394823592452 0.761735328391386 0.861310232069805 0.861100528487227 0.772099512609403 0.913438814829425 0.191976761455012 0.189035170971453 0.191985125766646 0.192496902499861 0.189757837562364 0.197871250078497 0.190795210229305 0.196457726619688 0.197098352185727 0.20050619906443 0.198408841782235 0.191728410350854 0.195512201725592 0.190101255534888 0.197586138738265 0.191558436900642 0.193615096595048 0.204883987162603 0.194019162143099 5 5 + 21931432 21931757 21931595.818 21931271 21931970 + gene protein_coding_gene TRUE TRUE AT5G53980.1 ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52); transcription factor Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Identical to Homeobox-leucine zipper protein ATHB-52 (Homeodomain transcription factor ATHB-52) (HD-ZIP protein ATHB-52) (ATHB-52) [Arabidopsis Thaliana] (GB:Q9FN29); similar to ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G15150.1); similar to homeobox protein PpHB1 [Physcomitrella patens] (GB:BAA93460.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) -0.0332650190402096 -0.369454638857925 0.71907598206717 1 0.114025838570549 1.56792930264393 -0.0332650190402096 0.0692299507827105 AT5G16850_at 0.802241746226648 1.06058780452372 0.877570430898002 1.16531887649596 0.84644278508876 0.997033754848344 0.405000058060891 0.69648586514889 0.903584307136246 1.08637287079293 0.560272131495659 0.90668528350466 0.738589516303949 1.24374435430911 0.677032068528115 1.00530033185810 1.08741148518585 0.920638902785185 0.806490777553658 0.237153951513183 0.240486045122353 0.234229128025826 0.233608491953612 0.234496531683433 0.235513661549267 0.245573077212091 0.232886020364226 0.230115223595487 0.230115223595487 0.233878241876223 0.232725653770788 0.235737106472249 0.234785251000066 0.231850923138248 0.236898959240313 0.232471288022389 0.235839626451464 0.237880745435768 5 5 - 5538349 5539115 5538674.273 5538183 5543546 - gene protein_coding_gene TRUE TRUE AT5G16850.1 ATTERT (TELOMERASE REVERSE TRANSCRIPTASE); telomeric template RNA reverse transcriptase Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. similar to telomerase reverse transcriptase catalytic subunit [Zea mays] (GB:AAX21528.1); similar to telomerase reverse transcriptase catalytic subunit [Zea mays] (GB:AAX21527.1); contains InterPro domain Telomere reverse transcriptase; (InterPro:IPR003545); contains InterPro domain RNA-directed DNA polymerase (Reverse transcriptase); (InterPro:IPR000477) 0.0354181818595690 0.369125370422047 0.719314235296119 1 0.113903790656278 1.76863945403171 0.0354181818595690 0.0877616608678122 AT5G61320_at 1.61354024981989 1.53520393783438 1.81479772607166 1.9027231495432 1.89570328672835 1.75529058133803 1.89344031177213 2.07787721528681 2.07241697450281 1.83209688953831 2.00407329024208 1.98747697843418 2.33990957189126 1.71121295365869 1.86444446243187 1.80493680636114 2.45116515174719 2.14800035271750 1.67874646111321 0.226800202121749 0.214933837502838 0.206742127602924 0.207881925536399 0.210396052718448 0.213064477423445 0.208063736434248 0.206742127602924 0.210118112506618 0.212765595242756 0.211267466684006 0.221296187250574 0.210358134814539 0.214116445650373 0.217434558832509 0.207526860772736 0.207666518828186 0.210455444499102 0.211165753287947 5 5 - 24672324 24672915 24672633.364 24672324 24673864 - gene protein_coding_gene TRUE TRUE AT5G61320.1 CYP89A3 (cytochrome P450, family 87, subfamily A, polypeptide 3); oxygen binding member of CYP89A similar to CYP89A2 (CYTOCHROME P450 89A2), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G64900.1); similar to cytochrome P450, putative [Arabidopsis thaliana] (TAIR:AT2G12190.1); similar to CYP89A5 (cytochrome P450, family 87, subfamily A, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G64950.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96947.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0309930231054005 -0.368851154852765 0.719512677059151 1 0.113802229639736 3.76106666779277 -0.0309930231054005 0.0449942648670129 AT5G51680_at 2.28582361193112 2.05676022653276 2.75293806327732 2.55273768058891 2.65457217924284 2.5927074287083 2.74759739482666 2.22152015828189 2.30730559500021 2.42211747477082 2.60268847431207 2.11047812308419 2.31544058463055 2.43862466370896 2.55065010855943 2.65892756793598 2.97695776303417 2.39390059248949 2.33886525546553 0.219130206916821 0.222237596466095 0.221928214414807 0.226679797344730 0.241154624324751 0.221817484256323 0.223753987240624 0.224946479620751 0.224687267057787 0.222733903385284 0.220356333217476 0.218552576739884 0.223910755737776 0.218282637244897 0.232503384643802 0.221441197323615 0.222487341817308 0.223156371419652 0.224824367681992 5 5 + 21015197 21015631 21015367.5 21014546 21016133 + gene protein_coding_gene TRUE TRUE AT5G51680.1 hydroxyproline-rich glycoprotein family protein similar to CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN), lipid binding [Arabidopsis thaliana] (TAIR:AT3G22120.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19117.1) -0.037821386571102 -0.368757322955626 0.719580585432046 1 0.113767494050255 4.91410938948949 -0.037821386571102 0.105710018054655 AT5G59910_at 9.4077876760078 9.58919753864319 10.1457990384241 10.3455357193826 10.1007463389869 10.0732742971691 9.70282817775895 9.92633269559257 9.64370461869308 9.68804204680205 10.4871945126479 10.4172408948382 10.2104629134767 10.3731144677664 10.7178649622046 10.4092060249906 10.1107358191618 10.439598499179 9.56205342587853 0.101831877535352 0.098550560657467 0.100620081156778 0.10460386357301 0.100890044143172 0.102849711996789 0.101027398936928 0.103544324331034 0.105980285538924 0.106120768201811 0.102708450014791 0.105917698839762 0.103874518207500 0.102183115210847 0.107345232293835 0.0998442780274292 0.108049557875977 0.0988823219969029 0.108314081527547 5 5 + 24144467 24144857 24144702.273 24144354 24145161 + gene protein_coding_gene TRUE TRUE AT5G59910.1 histone H2B Identical to Histone H2B.11 (HTB4) [Arabidopsis Thaliana] (GB:P40283;GB:Q5PP00;GB:Q8LDE5;GB:Q9FJE5); similar to histone H2B [Arabidopsis thaliana] (TAIR:AT3G45980.1); similar to Histone H2B (GB:O22582); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124); contains InterPro domain Histone H2B; (InterPro:IPR000558) -0.0322670850016951 -0.367876156297739 0.72021843048863 1 0.113441714832913 19.9249096646995 -0.0322670850016951 0.0608191161908605 AT5G45560_at 2.45475711035325 2.36809566954576 2.3345364061421 2.56318565729488 3.21771302011101 2.50728311588619 3.18521768576044 2.5032053185519 3.36763488572498 2.81331569614887 4.31192034571584 4.6582377579232 3.93381572154728 4.31948781230363 4.04796451745630 3.98476499911592 3.59508888730942 4.14863858768990 3.13788939018344 0.201817953591635 0.202467168220822 0.201869153671817 0.217727772090467 0.200645312867008 0.206628541857023 0.208665288519805 0.199389256022121 0.201170197687231 0.197689902165498 0.197689902165498 0.207451568086891 0.203003047016378 0.205502690159736 0.211789247710083 0.201989025357490 0.205479721663357 0.197689902165498 0.204201103234549 5 5 + 18486830 18487944 18487430.364 18482582 18488153 + gene protein_coding_gene TRUE TRUE AT5G45560.1 pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein similar to EDR2 (enhanced disease resistance 2), lipid binding [Arabidopsis thaliana] (TAIR:AT4G19040.1); similar to START domain-containing protein [Poa pratensis] (GB:CAH10188.1); similar to START domain-containing protein [Poa pratensis] (GB:CAH10187.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769); contains InterPro domain Pleckstrin-like; (InterPro:IPR001849); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Pleckstrin homology-type; (InterPro:IPR011993) 0.0489962188070086 0.365682699638189 0.721807164996152 1 0.112634057942524 6.25738415761492 0.0489962188070086 0.17560079412819 AT5G13780_at 8.45604717934466 8.62569487978417 9.32585739072611 9.13794566219285 9.08431353185057 9.37874021588416 7.9963695929176 8.49554141992841 7.25716289619001 7.41303160295136 8.23438630174989 8.2018968998797 8.46152772357035 8.29216841331274 8.22956459418462 8.2380267302423 8.6056496231531 8.06334779341102 7.28096178564468 0.167034977823368 0.167283344904119 0.168706001731042 0.162796918588634 0.170696947461799 0.175062054804023 0.167075830182852 0.162952454046328 0.183353510699610 0.174685492624990 0.158214993119467 0.158214993119467 0.158214993119467 0.160887804226926 0.161416823423991 0.162358738931354 0.158875726665636 0.168900250358016 0.179087164543580 5 5 - 4447760 4448582 4448375.455 4447262 4448649 - gene protein_coding_gene TRUE TRUE AT5G13780.1 GCN5-related N-acetyltransferase, putative similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT1G03150.1); similar to H0410G08.10 [Oryza sativa (indica cultivar-group)] (GB:CAH67655.1); similar to Os04g0635800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054011.1); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) 0.0379877172706622 0.365147323848722 0.722195150534989 1 0.112437639886397 16.6165002865119 0.0379877172706622 0.109442640621182 AT5G03900_at 8.30192661047942 8.30202070194713 9.02703403655136 8.90169101794988 9.60908593777472 8.96168635873868 8.99984924095654 8.67711628583585 8.2357361341878 8.11144126706092 9.23050175771552 9.05707161653505 9.05840399393398 9.01933408446338 9.05414142827788 9.35167419187103 8.98401470142147 9.00605980927307 7.97553389043486 0.143829113922143 0.137516832437006 0.145552580721179 0.144758141044924 0.137918696792528 0.144420376333549 0.139678184998264 0.144829599464226 0.145673977618993 0.140644499799732 0.143331037068631 0.137624451767106 0.133583316420381 0.146745842036607 0.133583316420381 0.138194541020457 0.148906980511909 0.145549805054746 0.143550237322955 5 5|0 +|/ 1050529 1051339 1051051.333 1048294 1052386 + gene protein_coding_gene TRUE TRUE AT5G03900.1|AT5G03900.2 Identical to Protein At5g03900 precursor [Arabidopsis Thaliana] (GB:Q8GW20;GB:Q8L632;GB:Q8LG15;GB:Q9FFM9;GB:Q9LZB9); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD28426.1); similar to Os02g0533000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047028.1); contains InterPro domain HesB/YadR/YfhF; (InterPro:IPR000361) -0.0405395921880265 -0.364096765711894 0.72295672568269 1 0.112053026465622 17.448911588028 -0.0405395921880265 0.127050136191968 AT5G42390_at 9.06298249511542 8.81273454341149 9.77398135621238 9.69739558808108 9.65501174837693 9.42883689626866 9.5159772901147 9.17065837170357 9.28766667469593 9.42449813152204 10.2648984586522 10.0710855497091 10.1028359973830 10.0661503708151 10.1626371815802 10.4278509383425 10.3173942065349 10.0901869341194 9.30468808576731 0.0871485196776112 0.0939491459023606 0.0896909466075962 0.0934397984756605 0.0875989830699443 0.0923243078366261 0.087862195289899 0.0937137871097823 0.0976261779697746 0.0922794040654493 0.087076820233578 0.0883130346358747 0.088199016642234 0.0898542064070839 0.0922026056422438 0.087076820233578 0.092349153433293 0.0964538261450255 0.0946652966558192 5 5|0 +|/ 16968648 16969844 16969439.4 16962479 16970328 + gene protein_coding_gene TRUE TRUE AT5G42390.1 metalloendopeptidase similar to peptidase M16 family protein / insulinase family protein [Arabidopsis thaliana] (TAIR:AT5G56730.1); similar to metalloendopeptidase (GB:AAA81472.1); similar to putative metalloendopeptidase [Oryza sativa (japonica cultivar-group)] (GB:BAD35692.1); similar to Peptidase M16A, coenzyme PQQ biosynthesis protein PqqF [Medicago truncatula] (GB:ABE94713.1); contains InterPro domain Peptidase M16, C-terminal; (InterPro:IPR007863); contains InterPro domain Peptidase M16, N-terminal; (InterPro:IPR011765) -0.0344656619097496 -0.363308023394204 0.723528711215429 1 0.111764973857420 19.1531127454791 -0.0344656619097496 0.0845827814745595 AT5G09880_at 8.14148525758331 8.2711295659521 9.2251053735468 9.00366810176425 9.6117194931959 8.91087535345978 8.5227020482894 8.19235065017212 8.35393038716631 8.69763177975901 9.53863016316459 9.46224471779018 9.1865494978223 9.101701508715 9.05243269456064 9.569305465484 9.0015255761198 9.1295205972227 8.91732720802371 0.144102136363879 0.14929323763523 0.157515530075202 0.143916571887119 0.142448295392913 0.147910209548314 0.147399302117152 0.151918331618997 0.168960643222555 0.143193225058441 0.145247232073413 0.144511839667882 0.14473342393102 0.152285772715436 0.152308957601367 0.141083694567481 0.168134066351515 0.148858502535398 0.141083694567481 5 0|5 /|- 3081840 3082634 3082261.375 3081443 3085265 - gene protein_coding_gene TRUE TRUE AT5G09880.1 RNA recognition motif (RRM)-containing protein similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT2G16940.1); similar to RNA-binding re (GB:ABE92730.1); similar to RNA-binding re (GB:ABE81620.1); contains InterPro domain Splicing factor, CC1-like; (InterPro:IPR006509); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0427220632880152 -0.363188784856678 0.723615196859342 1 0.111721480272861 17.6906470984586 -0.0427220632880152 0.141244484261549 AT5G06800_at 2.24076248873446 2.20434729607332 2.99491806866940 3.05729448756086 2.36276506698715 3.06109265509797 2.96596010444808 3.18148387877181 2.19087914238789 1.66047385217603 1.90323483927481 2.00848665939290 2.93098930344855 2.61085554607790 1.90384493620061 2.851976125269 2.54818887427782 2.43697255442526 2.12825653399546 0.243383482064200 0.242317919570004 0.247936958913145 0.243329755343204 0.242317919570004 0.248222182114788 0.244080497261451 0.251876540159886 0.248590384795291 0.251210903320594 0.243082234601563 0.242724387610174 0.255770844492304 0.252412783785012 0.259662790163357 0.245958622617384 0.247511978403285 0.243676019293498 0.247674755827935 5 5|0 +|/ 2104013 2105646 2105058.5 2103163 2105899 + gene protein_coding_gene TRUE TRUE AT5G06800.1 myb family transcription factor similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to Os04g0665600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054178.1); similar to H1005F08.10 [Oryza sativa (indica cultivar-group)] (GB:CAH65981.1); similar to OSJNBa0087O24.8 [Oryza sativa (japonica cultivar-group)] (GB:CAE03585.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0404322960048551 0.363077552010008 0.723695879496249 1 0.111680919385118 4.95483889628404 0.0404322960048551 0.127089629802851 AT5G43340_at 0.805213582067486 1.16218497166332 1.15184309686315 1.00134761180714 0.950016320907634 1.05688387950714 1.36378054319901 0.583189403179325 0.757470357706696 1.12976620954868 0.760456013096034 0.458751326916338 0.826403761658993 0.538146186836753 1.17352110572692 1.20127971442809 0.537878064437544 1.50532876391356 0.810611289843413 0.197679449652563 0.205702360597652 0.199667363765296 0.197013967489557 0.198513765426906 0.195643252007814 0.198445004635980 0.205826444016013 0.199649777246814 0.200288979241358 0.200490959698968 0.196877672453003 0.199613155873840 0.198632913096878 0.199318332166980 0.196088406412117 0.206295405973643 0.195643252007814 0.195855387399498 5 5 - 17410865 17411395 17411094.545 17410826 17412376 - gene protein_coding_gene TRUE TRUE AT5G43340.1 PHT6 (phosphate transporter 6); carbohydrate transporter/ phosphate transporter/ sugar porter phosphate transporter Identical to Inorganic phosphate transporter 1-6 (AtPht1;6) (H(+)/Pi cotransporter) (PHT1-6) [Arabidopsis Thaliana] (GB:Q9ZWT3); similar to PHT2 (phosphate transporter 2), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43370.1); similar to ATPT2 (PHOSPHATE TRANSPORTER 2), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT2G38940.1); similar to PHT3 (phosphate transporter 3), carbohydrate transporter/ phosphate transporter/ sugar porter [Arabidopsis thaliana] (TAIR:AT5G43360.1); similar to inorganic phosphate transporter [Lycopersicon esculentum] (GB:AAB82146.1); similar to putative phosphate transporter [Eucalyptus camaldulensis] (GB:BAE94383.1); similar to phosphate transporter [Lotus japonicus] (GB:BAE93352.1); contains InterPro domain Phosphate permease; (InterPro:IPR004738); contains InterPro domain Sugar transporter superfamily; (InterPro:IPR005829); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.0444570496795343 -0.362725801515511 0.723951044553229 1 0.111552733717600 1.89655904422913 -0.0444570496795343 0.151935753196463 AT5G32470_at 6.76630104830133 7.06593071624195 7.49708818386574 7.37521952104676 8.06198466643582 7.90534433211303 7.10627051698965 7.09266026174096 7.22907893052541 6.41538912170935 8.1949982129306 8.16970989706056 7.9215932511393 7.7944104322519 8.07208643722748 8.18098922592331 7.61466238590337 7.98375106605503 6.6359343160128 0.207603116055676 0.206811490753716 0.203412395905774 0.197078930455633 0.193975867270769 0.227580208938335 0.198033150917236 0.202584272401321 0.220218113531110 0.217632279454407 0.196553764067371 0.203544004498574 0.194554130104752 0.209522298789140 0.209496882794086 0.196651561962180 0.226419546076294 0.217304627189865 0.204124564521350 5 5|0 -|/ 12102566 12103116 12102762.111 12102129 12105829 - gene protein_coding_gene TRUE TRUE AT5G32470.1 similar to Os08g0566000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062539.1); similar to putative transcriptional regulator [Oryza sativa (japonica cultivar-group)] (GB:BAD10335.1); contains InterPro domain TENA/THI-4 protein; (InterPro:IPR004305) -0.0319363247669056 -0.362551103448985 0.72407778622066 1 0.111489114837033 14.7346795239972 -0.0319363247669056 0.062239884472006 AT5G23910_at 1.70492146111336 1.83288937387907 1.57526100608879 1.64465276484829 1.14283364146958 1.92445613819128 1.42097683975164 1.67671972693084 1.39390415434099 2.19228917377156 1.92127210447900 2.73349462275731 2.43503697701746 2.1513409098739 2.99344864801450 2.35494796083827 2.50341369263556 2.4792454005156 2.30255775403471 0.200563745892713 0.193551033275928 0.205885771599847 0.208964978937835 0.206224193295391 0.205319770973889 0.20328356167307 0.198544022233184 0.196870464558814 0.208750480819159 0.202815003459728 0.208603443536825 0.204814595722279 0.199424160853713 0.216645723979104 0.203213941681944 0.193551033275928 0.195878493856561 0.206713873468821 5 5 + 8071514 8072538 8071854 8068443 8072979 + gene protein_coding_gene TRUE TRUE AT5G23910.1 microtubule motor similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT5G02370.1); similar to Os05g0459400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055750.1); similar to Kinesin, motor re (GB:ABE78033.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain DNA polymerase beta, N-terminal-like; (InterPro:IPR010996) 0.0431625459586221 0.362312711974883 0.724250750807313 1 0.111402349208158 3.82005990248354 0.0431625459586221 0.144532159032853 AT5G20180_at 8.91078067924706 9.14853562041436 9.64974234023 9.8679692917376 9.8453291849197 9.45670632481457 9.32653233184896 9.524049000019 8.32791518025535 8.80576839124458 9.621409933432 9.64685500437065 9.7871532830381 9.42528333513655 9.50928102010816 9.63804832958161 9.01654675875856 9.44048528748614 8.58544410980707 0.128292749760547 0.124702523258114 0.129646922238116 0.124921878672395 0.128220762628983 0.137492264385071 0.131510700551458 0.130388999603127 0.167370625869517 0.130392253070060 0.130340691387267 0.127793118712756 0.125665522419915 0.136444555151645 0.125940385025781 0.125088404780350 0.130343401616343 0.133474658714670 0.131891114156991 5 5|0 +|/ 6811382 6811861 6811651.8 6810922 6812148 + gene protein_coding_gene TRUE TRUE AT5G20180.1|AT5G20180.2 ribosomal protein L36 family protein similar to Os03g0811800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051675.1); similar to Ribosomal protein L36 [Lactobacillus reuteri 100-23] (GB:ZP_01275107.1); contains InterPro domain Ribosomal protein L36; (InterPro:IPR000473) -0.0354625684205865 -0.361454862619181 0.72487329572942 1 0.111090583773048 18.5080433113662 -0.0354625684205865 0.0938637674173816 AT5G37520_at 1.93985316050318 1.63818668606310 2.01651848154805 2.1329197321607 1.71111046146087 2.02656170718496 1.62286340286146 1.75493053520686 1.65462506176999 1.31538551964849 1.42940362408779 1.80246397281792 1.84224200521127 1.48158643371258 1.72958888890651 1.47756397972205 1.29815456527713 1.59626371750091 1.89631373551714 0.205216820331945 0.205500163588291 0.205216820331945 0.205216820331945 0.213612708718589 0.205216820331945 0.205216820331945 0.205216820331945 0.205268558119003 0.205801131620784 0.208161485939857 0.213082837813866 0.217098269057900 0.205858425222207 0.208103201555627 0.207537531379810 0.212309923690615 0.209140181663105 0.208855740777562 5 5 + 14919901 14921385 14920696.545 14919900 14921441 + gene protein_coding_gene TRUE TRUE AT5G37520.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G24950.1); similar to Os01g0550800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043303.1); similar to carboxyl-terminal peptidase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD68526.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) -0.0338417449925156 -0.360697672045412 0.725422965593596 1 0.110815998459042 3.45750127289851 -0.0338417449925156 0.0814466527446685 AT5G19670_at 3.52308853877707 3.80052689441736 4.00210959299398 4.47007628673202 4.73048005214671 4.39514822922278 4.00676026299892 3.24348964929578 3.59024739018017 3.76687157558079 4.59971044769038 4.57689744987536 4.0482423150115 4.22057208235118 4.05045914553987 4.22942489303652 4.47835071359279 4.16584887925939 3.63159921756632 0.237378011407387 0.237378011407387 0.23880663876753 0.238543109164522 0.253849983381201 0.248101666564714 0.244161031300363 0.237378011407387 0.245437592023706 0.241518134146857 0.239944664104859 0.241326809255411 0.237378011407387 0.240869554878395 0.239947832352932 0.237735239112783 0.264795333282627 0.249419342367304 0.245195101812103 5 5 + 6648772 6649255 6648982.364 6646721 6649500 + gene protein_coding_gene TRUE TRUE AT5G19670.1 exostosin family protein similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G25820.1); similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT4G32790.1); similar to Exostosin-like [Medicago truncatula] (GB:ABE81272.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) -0.0476451233511533 -0.360013241904176 0.725919955933962 1 0.110568281364482 8.00100708927494 -0.0476451233511533 0.172273664781192 AT5G18960_at 5.02909499715716 5.25490133534086 5.25989576395757 5.82210645649739 6.26004110301966 6.4351645207556 4.54012377655497 4.71738490628493 4.60178524180791 4.5124486632453 5.26411940765006 5.23806941315978 5.69385997058325 5.51324484662493 5.54379399230628 5.2931588211053 5.46182161396763 5.29340482936071 4.37000104084536 0.224385460844874 0.221048552596066 0.214802700659946 0.212602887934380 0.211953299651790 0.220137141147472 0.213752192448578 0.217480388208308 0.229487165040821 0.213574426950213 0.214545919549365 0.211953299651790 0.217672561141778 0.213973303546664 0.218626109753405 0.216578696599509 0.225483986293422 0.216792010797717 0.223460572727437 5 5 + 6332581 6332925 6332756.727 6330381 6333073 + gene protein_coding_gene TRUE TRUE AT5G18960.1 FRS12 (FAR1-RELATED SEQUENCE 12); zinc ion binding similar to FRS7 (FAR1-RELATED SEQUENCE 7), zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G06250.1); similar to FAR1; Zinc finger, SWIM-type [Medicago truncatula] (GB:ABE87107.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1; (InterPro:IPR004330) 0.0379543253935265 0.359377520583358 0.726381695609575 1 0.110338604088472 10.3685536543515 0.0379543253935265 0.113368516379189 AT5G25770_at 8.47426427967387 8.46967093200657 9.5630010989992 9.46843219553898 9.80526082377636 9.12718525852015 6.48382127481047 6.53310565126335 6.81533443346505 6.51522002739673 6.36797789450064 6.7756573244694 6.91296833442833 7.40830034031163 5.56090069800205 7.42489003394003 6.69999301850592 6.20946315402587 6.61482465997889 0.223432013282643 0.218459853733147 0.224652430540337 0.219397817133033 0.216160165482314 0.236129447342838 0.232035336614143 0.214525629016585 0.219335614184500 0.222106447109190 0.221024168121438 0.219618748583656 0.215463817856795 0.216507307185347 0.217998935004564 0.217745779909123 0.263325180529341 0.220668346917169 0.215039843606776 5 5|0 -|/ 8969504 8970256 8969835.375 8969218 8972049 - gene protein_coding_gene TRUE TRUE AT5G25770.1|AT5G25770.2|AT5G25770.3 similar to Os06g0163200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056894.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD67646.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379) 0.0386441491400991 0.358346779592715 0.727130589929916 1 0.109967052099662 15.1498319676836 0.0386441491400991 0.118789112862395 AT5G15340_at 1.09277120830851 1.60803617929929 1.93182204316343 1.87748194127597 1.21558508431898 1.82765655262885 1.66920159359597 1.70683550099219 2.02807192964371 2.07466064823906 1.78515852088371 1.83221382568805 2.01835487817633 1.84400071813035 1.84685879947784 1.61732630554802 2.11275466251168 1.91573017272526 1.54597316097310 0.230076409591342 0.235648248259845 0.228507912629071 0.232240422335706 0.229030552329873 0.235565898426363 0.230709288795729 0.236519119666560 0.234332822259478 0.235669364198277 0.234616614142172 0.230618909592588 0.234305598552102 0.231750399017132 0.232234006196863 0.228507912629071 0.247611649109523 0.240545246601063 0.228507912629071 5 5 - 4982280 4982847 4982547.091 4982276 4984147 - gene protein_coding_gene TRUE TRUE AT5G15340.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G29760.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE86760.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0414021648344696 -0.355128726216712 0.729470618020325 1 0.108813729935376 3.49339958712020 -0.0414021648344696 0.138929447102658 AT5G65090_at 3.23839852729012 3.73248803520578 4.09379954276562 3.58082548184393 3.07505111411198 2.83791667028019 2.04200170824637 1.80629538071411 2.05683491553642 2.66239660405168 2.12612751771843 2.62837084622575 2.40163048102344 2.57476838180533 2.14528177958275 2.44501271559918 2.3810660449521 2.99571842084515 2.42212184067002 0.288723770222828 0.298184792368664 0.309146693129270 0.299400766834437 0.289039416721598 0.294580350756614 0.28164224195035 0.28557375203335 0.280426584202497 0.278526463420298 0.284641378433889 0.278837582628115 0.282791377566670 0.278645114930965 0.279864741051745 0.280172103272939 0.285607746602457 0.282004394834927 0.281340349477064 5 5|0 +|/ 26023064 26023808 26023504.222 26021243 26024077 + gene protein_coding_gene TRUE TRUE AT5G65090.1 BST1 (BRISTLED1); hydrolase Encodes a protein involved in root hair morphogenesis and tip growth. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but, apparently, is not required for normal subsequent tip growth. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT5G04980.2); similar to Os06g0222900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057181.1); similar to Os02g0751900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048138.1); similar to putative inositol-1, 4, 5-trisphosphate 5-phosphatase [Oryza sativa (japonica cultivar-group)] (GB:BAB90404.1); contains InterPro domain Inositol polyphosphate related phosphatase; (InterPro:IPR000300); contains InterPro domain Endonuclease/exonuclease/phosphatase; (InterPro:IPR005135) 0.0409308605178499 0.354866424750776 0.729661480076258 1 0.108720170338292 5.47219612933479 0.0409308605178499 0.136159718105374 AT5G47170_at 2.49281168340143 2.48076214518018 2.80536393787674 2.29836890831595 2.03224532437041 2.70246088410141 2.13835565114323 2.05682590912618 2.58035372394466 2.1970551012183 2.51564268751631 2.62178945874398 2.69235514375602 2.36742485977538 2.87497020330878 2.44706963088388 2.35692440242389 2.97431168979675 2.24069124396797 0.192702912285981 0.189696645896936 0.199781013346617 0.198351161359307 0.189696645896936 0.197480814099631 0.197651085555437 0.207447983573626 0.206337234231689 0.195266147642860 0.199666336444201 0.192359845148104 0.204480051964208 0.19867693217758 0.200506298865667 0.189696645896936 0.195458130717325 0.194987103806321 0.200035655516738 5 5 - 19175765 19176125 19175974.455 19175735 19176187 - gene protein_coding_gene TRUE TRUE AT5G47170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01130.1) -0.0425274843927145 -0.354795709108631 0.729712939169667 1 0.108694958500738 4.84873815505741 -0.0425274843927145 0.146128770866304 AT5G13890_at 5.8473305081722 6.31967444990582 7.08840059131917 7.03595166959786 7.41853517244205 6.66813770675995 5.51443204110762 5.66880121268368 5.69939107622461 5.25244630095819 5.77489619017177 6.3761860250069 6.04050412899531 6.26027648818514 6.61059130939169 6.27750968525717 6.18145728213802 6.32391501749068 4.90316415846300 0.213322406630967 0.213887889134593 0.222716491745600 0.213330301264701 0.217414408831358 0.232075272934703 0.210748356371217 0.220581318351888 0.234588146328536 0.216340234383062 0.210748356371217 0.212379717893355 0.217773141171834 0.217241358846583 0.213441609123162 0.212403568648167 0.218750737552764 0.210967749590348 0.210982032749483 5 5 - 4479946 4480403 4480155.545 4478845 4480923 - gene protein_coding_gene TRUE TRUE AT5G13890.1|AT5G13890.2|AT5G13890.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49470.1); similar to Protein of unknown function DUF716 [Medicago truncatula] (GB:ABD33160.1); contains InterPro domain Protein of unknown function DUF716; (InterPro:IPR006904) 0.0441560796584309 0.354704560083581 0.729779269499576 1 0.108662468893204 12.2029916828543 0.0441560796584309 0.156016806759000 AT5G55130_at 7.11026528491806 7.24221776559032 8.50734782077011 8.14791830775512 7.91005167877048 7.57537495354237 6.77951312704038 6.59258593807386 6.28988064134619 5.58072629406508 6.96359736994527 6.96227742128838 6.84140406750106 6.8595514312989 6.59579301315448 6.8707385610963 7.0940288061377 6.94659842438198 6.11911649481596 0.220779056704451 0.226345683362471 0.227696812699929 0.226112603304886 0.223808721511801 0.233486266227931 0.231280859089394 0.225352846945647 0.238385822609129 0.243975660830304 0.220779056704451 0.220779056704451 0.225495143815383 0.228575416777879 0.225334981927456 0.225910072244835 0.245152731910732 0.235789899286027 0.232286576017450 5 5 - 22390664 22391318 22390919.727 22390394 22393312 - gene protein_coding_gene TRUE TRUE AT5G55130.1|AT5G55130.2 CNX5 (SIRTINOL RESISTANT 1); Mo-molybdopterin cofactor sulfurase putative molybdopterin synthase sulphurylase (cnx5) Identical to Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) (CNX5) [Arabidopsis Thaliana] (GB:Q9ZNW0); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to molybdopterin synthase sulphurylase [Nicotiana plumba (GB:AAD18052.1); contains InterPro domain NAD-binding site; (InterPro:IPR000205); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain MoeZ/MoeB; (InterPro:IPR007901)|Identical to Molybdenum cofactor synthesis protein 3 (Molybdopterin synthase sulfurylase) (MPT synthase sulfurylase) (CNX5) [Arabidopsis Thaliana] (GB:Q9ZNW0); similar to SAE2 (SUMO-ACTIVATING ENZYME 2) [Arabidopsis thaliana] (TAIR:AT2G21470.2); similar to molybdopterin synthase sulphurylase [Nicotiana plumba (GB:AAD18052.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763); contains InterPro domain Molybdenum cofactor biosynthesis; (InterPro:IPR009036); contains InterPro domain UBA/THIF-type NAD/FAD binding fold; (InterPro:IPR000594); contains InterPro domain MoeZ/MoeB; (InterPro:IPR007901) -0.0347270292912627 -0.354091051457259 0.730225788025624 1 0.108443998586849 13.9273209163540 -0.0347270292912627 0.0937616678601759 AT5G15860_at 7.24890276155032 7.31316437526413 8.62954600675039 8.89469450580027 8.3767251568202 7.81985080756659 5.13569199574534 4.69978617768409 5.96706815937204 4.61491964262573 4.03952676595984 3.69463782452592 4.83546244242009 4.45438355712893 3.7972212090801 5.75461002507032 6.13886130129633 5.07437058677786 4.61208487578658 0.275494132558157 0.276968598590679 0.291778853581623 0.281795200819071 0.280313494851984 0.29186534538152 0.270129783039518 0.273734709699353 0.273531499297392 0.270129783039518 0.283704655114211 0.274518653676091 0.270129783039518 0.280874237559103 0.270129783039518 0.270129783039518 0.280732481908516 0.271798981253551 0.276204399962659 5 5|0 -|/ 5178720 5179574 5179217.3 5178508 5181386 - gene protein_coding_gene TRUE TRUE AT5G15860.1|AT5G15860.2 ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase|ATPCME (PRENYLCYSTEINE METHYLESTERASE) Encodes a protein with prenylcysteine methylesterase activity. similar to serine esterase [Arabidopsis thaliana] (TAIR:AT3G02410.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96862.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Carboxylesterase, type B; (InterPro:IPR002018) -0.0400386472823533 -0.353896841432694 0.730367158155193 1 0.108374917266169 12.1589577767113 -0.0400386472823533 0.131174545306358 AT5G02210_at 1.01390241939989 1.57109226785516 1.64957782802692 1.28726233682069 1.29693450583590 1.10351726194612 0.76660011756215 1.39038470138198 1.26963980295267 1.08963487566836 1.22784193307942 1.14360399990560 1.18911090682194 1.43834195045157 0.86793024798116 1.54705615913041 1.27609962930800 1.49771042168951 1.66753708536640 0.186675680822720 0.184806000909371 0.180118968037174 0.185560936326164 0.180118968037174 0.187060038107707 0.190282526982277 0.180942613989225 0.183902640215599 0.190067654003764 0.184812431300580 0.187944583261322 0.183556806293599 0.187509502474001 0.187926942631177 0.186839056102919 0.191505497252907 0.186896550313838 0.180722530753999 5 5 - 439263 439846 439520.818 439251 439872 - gene protein_coding_gene TRUE TRUE AT5G02210.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14060.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAC84332.1); similar to Os07g0158400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058928.1); contains InterPro domain GCK; (InterPro:IPR012891) -0.0449001758881708 -0.353589205961909 0.730591114893666 1 0.108265565661395 2.56777517687448 -0.0449001758881708 0.161252265131057 AT5G38830_at 7.33610495609658 7.86461772120287 8.6862428389819 8.57309343961692 9.29646753937883 8.21760423447709 7.76103526078202 7.96398106430407 6.97182589290033 6.76453139748997 8.2214138089751 8.1214328714046 7.75223854090576 7.69979087551934 7.90023148875388 8.31275443722186 7.67012997395478 7.42016496265109 6.80757427160303 0.195646177592117 0.192166337070427 0.196752945912425 0.198378424980005 0.204473508393254 0.214620018980578 0.192390639178938 0.198908957525786 0.225000763561487 0.204745072789834 0.199061742533104 0.192166337070427 0.193201801696734 0.219933337968739 0.196467636610042 0.196888984924264 0.215804838058918 0.206495383872951 0.202925192449785 5 5|0 -|/ 15562998 15563805 15563352.6 15562799 15565416 - gene protein_coding_gene TRUE TRUE AT5G38830.1 tRNA synthetase class I (C) family protein similar to tRNA synthetase class I (C) family protein [Arabidopsis thaliana] (TAIR:AT3G56300.1); similar to Os09g0556500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063899.1); similar to Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93925.1); contains InterPro domain Cysteinyl-tRNA synthetase, class Ia; (InterPro:IPR002308); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080) 0.0538657200831072 0.353293289821144 0.730806564898907 1 0.108160467280096 15.5800167854822 0.0538657200831072 0.211754254752414 AT5G23130_at 2.67752792042744 3.48912276774863 3.2901047827449 3.37927872715749 4.31453734054191 4.05661017351309 3.07210514494539 3.29067993113922 3.20812261632168 3.03279823631221 4.1504847082773 3.69929335379478 3.27254113063104 3.51462678237356 3.79031881468644 3.84712431019163 3.43811275971004 3.37283090529344 3.36957128999918 0.246249760520526 0.25142398041969 0.253183870141005 0.251878921618020 0.252165591334438 0.254701735029084 0.253115126691778 0.247836585501718 0.253584293742068 0.251377203801854 0.246016070688855 0.250396702450359 0.252969931925754 0.258616402796301 0.25021572314047 0.249396084093229 0.258623169562378 0.257457544710552 0.246098042564371 5 5 + 7782835 7783283 7783072.273 7781199 7783604 + gene protein_coding_gene TRUE TRUE AT5G23130.1 peptidoglycan-binding LysM domain-containing protein similar to peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G08200.1); similar to Os10g0485500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064897.1); similar to LysM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93589.1); contains InterPro domain Peptidoglycan-binding LysM; (InterPro:IPR002482) -0.0434426512018002 -0.353105420939715 0.730943360728167 1 0.108093787782315 6.86582783677599 -0.0434426512018002 0.152929763425872 AT5G65660_at 8.06489194867408 8.25931786000573 8.97682508385514 9.27291004163538 9.52148086309835 9.53257363848856 7.9658572105089 8.49226710622533 9.09024017503415 9.0306020748382 9.93869268385634 9.57175852136912 9.10855067904775 9.31101403980003 9.52063117372179 9.42284412634182 9.46141836402564 9.6684990296555 8.91100545841753 0.130618785115405 0.119576298640171 0.123022269328777 0.119327056491347 0.12192382239284 0.116919911989431 0.127322368166114 0.123381999035966 0.132454345398361 0.121424132607476 0.123210975266865 0.122277825896147 0.119349472541811 0.123657434691349 0.119677327527386 0.119485893897007 0.127529600520717 0.120023192742874 0.126070234054728 5 5 - 26262723 26263423 26263037.636 26262475 26263605 - gene protein_coding_gene TRUE TRUE AT5G65660.1 hydroxyproline-rich glycoprotein family protein similar to putative AFG1-like ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAO20064.1) 0.0367670368601625 0.352907085634658 0.731087788286377 1 0.108023431007874 18.0162864590567 0.0367670368601625 0.109817899693432 AT5G19690_at 8.78266752485426 8.78154275795403 9.5162384261183 9.28326333043693 9.07251512875845 8.77182038069997 7.7789984100751 7.95358063378918 7.05795806651262 7.19062765836425 8.03416072613827 8.57411667596831 8.27728079437324 7.87413846716633 8.2645852488699 8.02167122405303 8.0245007302951 8.03558835031415 7.16527407140577 0.158445337242353 0.158938788427394 0.159461967811212 0.169407797492115 0.157591863310741 0.157726628112260 0.159360297353114 0.156518034136453 0.181144320955986 0.164767589586143 0.158846338759603 0.154893891797099 0.156937529943335 0.168774209042558 0.158738154692650 0.151478809628522 0.160205891132048 0.161242149287510 0.161262166425246 5 5|0 +|/ 6657117 6657934 6657514.222 6652518 6658411 + gene protein_coding_gene TRUE TRUE AT5G19690.1 STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions similar to STT3B (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B), oligosaccharyl transferase [Arabidopsis thaliana] (TAIR:AT1G34130.1); similar to oligosaccharyl transferase [Aedes aegypti] (GB:EAT44394.1); similar to Oligosaccharyl transferase, STT3 subunit [Medicago truncatula] (GB:ABE78557.1); similar to hypothetical protein CC1G_09885 [Coprinopsis cinerea okayama7#130] (GB:EAU90645.1); contains InterPro domain Oligosaccharyl transferase, STT3 subunit; (InterPro:IPR003674) 0.0320164476966769 0.351887476796449 0.73183043886699 1 0.107662346971504 16.3806825953732 0.0320164476966769 0.0724301363012855 AT5G64900_at 2.92255119183172 2.85110704051023 3.25960710500355 3.02682998016369 3.32155857163873 2.99533912213617 2.82998454508980 3.14552258652669 3.19076493830565 3.2118895148127 4.13270572186742 4.52997624240986 3.93925222136338 4.27634503871462 3.96326041850089 3.94892488438373 3.88203350450204 4.0819143387062 3.42373981744935 0.225189050627836 0.224042936159234 0.223864842662281 0.232705516095390 0.233475613166844 0.225076680645881 0.220137535191758 0.224963242202774 0.264334664487465 0.220137535191758 0.236588737310172 0.233230974023249 0.225215504878422 0.234419716837986 0.229686521788341 0.222169906359385 0.228362151739474 0.234415287906087 0.220137535191758 5 5 + 25954506 25955139 25954751.091 25954396 25955302 + gene protein_coding_gene TRUE TRUE AT5G64900.1 ATPEP1/PROPEP1 (Elicitor peptide 1 precursor) Encodes a putative 92-aa protein that is the precursor of AtPep1, a 23-aa peptide which activates transcription of the defensive gene defensin (PDF1.2) and activates the synthesis of H2O2, both being components of the innate immune response. Identical to Elicitor peptide 1 precursor (PEP1) [Arabidopsis Thaliana] (GB:Q9LV87;GB:Q8LCK9); similar to PROPEP2 (Elicitor peptide 2 precursor) [Arabidopsis thaliana] (TAIR:AT5G64890.1); similar to 80C09_17 [Brassica rapa subsp. pekinensis] (GB:AAZ41828.1) -0.0339105731016152 -0.351668406408189 0.731990040408239 1 0.107584898403772 6.72894566944353 -0.0339105731016152 0.0891311895421883 AT5G13600_at 1.5034228900253 1.46768959240731 1.69169831918463 1.68627497904418 1.60211010175689 1.60730697649065 1.75052577096549 1.30183505208771 1.59581427293062 1.42799032187248 1.80012017844347 1.81612900557994 1.76571974378206 1.52514300238612 1.60597613589907 1.24008653952805 1.5400299389762 1.57209802304422 1.73656812650589 0.183491228518650 0.178475718431984 0.180884337792501 0.178697378019815 0.17940664327933 0.182673303852004 0.177014687415509 0.182854420304832 0.181043885412429 0.178625561344353 0.185377410848427 0.179885763388882 0.185760727477311 0.180692382753456 0.190261018431758 0.18067783365826 0.179208558407127 0.178154526823295 0.178823818347589 5 5|0 +|/ 4381797 4382468 4382174.2 4380435 4382500 + gene protein_coding_gene TRUE TRUE AT5G13600.1 phototropic-responsive NPH3 family protein similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G03250.1); similar to BTB/POZ; NPH3 [Medicago truncatula] (GB:ABE93313.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) -0.0324979739090899 -0.350651078491122 0.73273137870852 1 0.107225856063227 3.17383482427421 -0.0324979739090899 0.0779047139965303 AT5G27710_at 5.16351694590556 4.95310280162919 6.89655967565998 6.25186856897699 7.48958460585192 6.48490406994557 5.979120904766 5.53459065183721 4.18199729092798 4.51294986945497 5.1134975179987 5.02193869997235 5.40969366296096 4.8329098425328 4.80267680723626 5.68741696711825 5.01294660661214 5.04493763377866 4.57813188135791 0.271159845095643 0.270695797342181 0.263569039848908 0.276284055122815 0.266049812448865 0.273782196038315 0.261764900583342 0.262261594294499 0.26746237537187 0.266350275251121 0.262880819882296 0.261764900583342 0.269380106987542 0.278175295743146 0.270857096372188 0.263711027044156 0.278106611542607 0.265114919526236 0.268501934930015 5 5|0 +|/ 9813837 9814995 9814517.778 9812992 9815424 + gene protein_coding_gene TRUE TRUE AT5G27710.1 similar to At5g27710 [Medicago truncatula] (GB:ABE92866.1) 0.0552639988553446 0.348360136311023 0.734401860837675 1 0.106421036396814 10.8642119769998 0.0552639988553446 0.223427636097398 AT5G18760_at 7.49843235563175 7.57939321424746 8.4539904586454 8.53478970848863 9.07161316139268 8.64707435065771 8.50368692450683 8.47957412365617 7.55522950043395 7.69176093213647 8.54081272881162 8.58997319467947 9.06065990182182 8.75206742494908 8.24010924790055 8.82402923706919 8.72945810612741 8.71628274561169 7.71984454376402 0.145190433585521 0.135919610117804 0.130716924794205 0.129311234621577 0.14156992778468 0.137018688389836 0.135351162013545 0.132255647287002 0.140166544980975 0.133988634322541 0.131208411724255 0.126547039357664 0.128462902507170 0.137559506561233 0.135030895106383 0.127046368643582 0.133845302115865 0.129452196867031 0.143503167022005 5 5 - 6258522 6259490 6259029.091 6258297 6260931 - gene protein_coding_gene TRUE TRUE AT5G18760.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G06330.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABE87296.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0320610171661366 -0.347950701861167 0.73470055965594 1 0.106277742122117 16.5147121532281 -0.0320610171661366 0.0762025944929538 AT5G13220_at 1.03475524790351 1.11628237538529 1.38490194504661 1.56295152977638 1.18442942806451 0.768242570937941 0.723570689644176 0.83851976976914 1.46314237731562 0.736342134900268 1.15346184326451 1.03556176430381 1.17181778458944 1.14669922204556 0.344517912333661 0.80649480734909 0.856281820859102 1.19684956911938 0.976025207430832 0.224976821718985 0.220989048358638 0.220589753258492 0.221129689672697 0.222725227467806 0.220589753258492 0.223699411585828 0.222430653147689 0.231439423268738 0.228719050057998 0.221676350805975 0.225161192865211 0.237192617894503 0.220589753258492 0.226103225921244 0.223360902400867 0.230738353303494 0.224244732334626 0.224232006117286 5 5|0 +|/ 4219022 4220469 4219474.7 4218891 4220817 + gene protein_coding_gene TRUE TRUE AT5G13220.1|AT5G13220.2|AT5G13220.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G20900.1); similar to P0482D04.10 [Oryza sativa (japonica cultivar-group)] (GB:BAB89663.1); similar to Os04g0395800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052661.1); similar to Os10g0392400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064513.1); contains InterPro domain ZIM; (InterPro:IPR010399)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19180.1); similar to P0482D04.10 [Oryza sativa (japonica cultivar-group)] (GB:BAB89663.1); similar to Os04g0395800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052661.1); contains InterPro domain ZIM; (InterPro:IPR010399) 0.0326920122066615 0.347712987654582 0.734874002817221 1 0.106194622116382 2.0879386097486 0.0326920122066615 0.0820456373787817 AT5G01860_at 1.84826968981057 1.64335510171310 2.06296642127988 1.78746528478778 1.89638848029756 2.09010121311932 1.50099112939095 1.81920305274572 2.13755837308225 2.38901525256802 2.35335240777062 2.14614941657252 2.22914654113932 2.02325432838728 2.18457748960585 2.23222951719764 2.17110157159219 2.05107563918268 1.95260287327059 0.202796070342066 0.203655482869555 0.203761875032968 0.202169168892410 0.208014619948936 0.21321437509796 0.207968356888151 0.202169168892410 0.208778751206392 0.205544571563149 0.218887487159213 0.206010354451138 0.203213522951520 0.207983900270568 0.215615311346123 0.202169168892410 0.206980838792232 0.206778578367472 0.208596425049466 5 5 + 335721 336217 335939.455 335627 336274 + gene protein_coding_gene TRUE TRUE AT5G01860.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT5G27880.1); similar to Os12g0581900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067138.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC99748.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.0333310456986824 -0.347482207445449 0.735042401575754 1 0.106113979706750 3.99788572842876 -0.0333310456986824 0.087674745596667 AT5G57620_at 0.916339340894629 0.767460074434338 0.485219339012819 0.775303073892288 0.739515228281979 0.96168374448385 0.565025777905912 0.852027156741791 0.82381039922218 0.646712515480073 1.11564033538554 0.726587574749978 1.29046775723093 0.960560183669362 1.03222979290730 1.43877040230472 1.11282142810355 0.977834490805136 1.11839224284265 0.215517708409111 0.204904933496078 0.217866956499965 0.214335179211052 0.207574866017042 0.217537530229693 0.206941975638463 0.204904933496078 0.224923463091243 0.215490495470331 0.204904933496078 0.207069939149799 0.222509669197415 0.207357419279343 0.209083288419069 0.207508984309055 0.207638251056164 0.210378060902187 0.214233957793815 5 5 + 23353064 23353588 23353284.636 23352043 23353792 + gene protein_coding_gene TRUE TRUE AT5G57620.1 MYB36 (myb domain protein 36); DNA binding / transcription factor Encodes a putative transcription factor (MYB36). similar to ATMYB84/MYB84/RAX3 (myb domain protein 84), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G49690.1); similar to MYB transcription factor MYB71 [Glycine max] (GB:ABH02912.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0329421330810307 0.347433497966704 0.735077946421207 1 0.106096965645053 1.73023957436905 0.0329421330810307 0.0844326327564424 AT5G62380_at 0.792706095596244 0.324080502161512 0.391248913106011 0.533368606939471 0.813117415702431 0.668605735531462 0.864440531064518 0.938759556674566 0.698567198337485 1.47663995668949 1.07905719566734 1.08849076578785 1.48878226490762 1.13555409034794 1.43622417434059 1.3802025699508 1.44678738760185 1.17854891096222 1.10580846922978 0.220305791847378 0.199461523357640 0.204695062064153 0.202493409040885 0.207881478826401 0.200312832250764 0.209570947085180 0.201510055187377 0.201132079055342 0.206343295497566 0.211323603013971 0.210214847408965 0.197193772321214 0.203565498861611 0.225644499250642 0.203794932621588 0.222730416487946 0.216855444179491 0.201798167146560 5 5 + 25068505 25069048 25068763.545 25067910 25069084 + gene protein_coding_gene TRUE TRUE AT5G62380.1 VND6 (VASCULAR-RELATED NAC-DOMAIN 6); transcription factor Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. similar to VND4 (VASCULAR RELATED NAC-DOMAIN PROTEIN 4), transcription factor [Arabidopsis thaliana] (TAIR:AT1G12260.1); similar to putative OsNAC7 protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25783.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) -0.0334517616315177 -0.346711529007327 0.73560486626704 1 0.105845057178851 1.85222981694604 -0.0334517616315177 0.0892893138336373 AT5G07480_at 1.97508980802621 1.62105098622833 1.92956629230242 2.37173409714657 1.89709750400510 2.24181812686386 1.82946591663383 1.96220701656194 1.98833415084088 2.04658752987209 2.11407435589238 1.86649326855414 2.31038351489587 2.24085674672504 1.98586468688962 1.91825441046962 2.05525386944936 1.86744076606674 1.67749902794643 0.197359390753287 0.194113197583088 0.191242591617238 0.190417940127453 0.191956659533262 0.198138753542070 0.191521593277609 0.192253197605624 0.197652043165946 0.190185072940508 0.19287565145125 0.190515053571999 0.190159971602733 0.190941004354997 0.193119795966749 0.190760376396307 0.190159971602733 0.194482616377124 0.202647671415804 5 5 + 2368939 2369465 2369156.364 2367168 2369555 + gene protein_coding_gene TRUE TRUE AT5G07480.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT3G60290.1); similar to Fe2+ dioxygenase-like [Capsella rubella] (GB:AAR15457.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) 0.0369181936953443 0.344677207078793 0.737090357243121 1 0.105137995234627 3.95298768776485 0.0369181936953443 0.117027487064251 AT5G48110_at 1.72207458983895 1.65941597255944 1.33119776147085 1.54676428744679 1.38069156494922 1.7083908597224 1.1197096669141 1.11725275402888 1.23959214468646 1.80634358021963 1.42402510189415 1.86911407311222 1.79097786340307 1.29775654221194 1.64943540589320 1.28832296078300 1.43215504400966 1.36749478286604 0.982470298315832 0.209640825273234 0.203318575471833 0.199357670471182 0.207476667756135 0.202016773853805 0.200530307476461 0.201207128495122 0.202865228336727 0.213224085056563 0.206966476213710 0.199357670471182 0.217579617745732 0.209664169627713 0.199357670471182 0.205505487938843 0.207803881509403 0.200568595954712 0.207782305103311 0.200622493578868 5 5 - 19518391 19518970 19518614.273 19518383 19521583 - gene protein_coding_gene TRUE TRUE AT5G48110.1 terpene synthase/cyclase family protein similar to terpene synthase/cyclase family protein [Arabidopsis thaliana] (TAIR:AT1G70080.1); similar to putative vetispiradiene synthase 5 [Solanum tuberosum] (GB:AAD02270.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930); contains InterPro domain Terpenoid synthase; (InterPro:IPR008949); contains InterPro domain Terpene synthase, metal-binding; (InterPro:IPR005630); contains InterPro domain Terpene synthase-like; (InterPro:IPR001906) 0.0308987143128955 0.343713821124589 0.73779422930758 1 0.104804571907881 2.87704329687248 0.0308987143128955 0.0687416808801845 AT5G40420_at 0.444524597508549 0.689809846291322 0.968820717987757 0.780051658586188 0.846500059541686 0.970968982034658 0.914874918935144 0.85799783254363 1.08242192270108 1.19949704581474 1.21351909827237 0.877464952479337 1.21118890816522 1.24264351289068 1.12574019734543 1.23963734738909 0.936565769530935 1.57957083254465 1.17630303377762 0.186106995405003 0.189507505580506 0.195079751620053 0.191576254904574 0.190914696107565 0.185756686480816 0.199321170973426 0.184582778193266 0.197371700984401 0.193808377937673 0.187697196227089 0.188134181366467 0.189860200438797 0.184582778193266 0.192537792088585 0.186643376478888 0.189931256079871 0.206638920207283 0.193568630919313 5 5|0 -|/ 16190889 16191911 16191328 16190621 16192011 - gene protein_coding_gene TRUE TRUE AT5G40420.1 OLEO2 (OLEOSIN 2) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Identical to Oleosin 21.2 kDa (Oleosin type 2) [Arabidopsis Thaliana] (GB:Q39165;GB:Q39164;GB:Q41911); similar to OLEO4 (OLEOSIN4) [Arabidopsis thaliana] (TAIR:AT3G27660.1); similar to oleosin isoform [Arachis hypogaea] (GB:AAT11925.1); contains InterPro domain Oleosin; (InterPro:IPR000136) 0.0299409403999669 0.343635779577347 0.7378512593236 1 0.104777601991118 1.97470957405780 0.0299409403999669 0.0585646557062413 AT5G51420_at 0.494529640493144 0.83529945674172 1.30970958620904 1.64036422455459 1.08633170740707 1.0428804979622 1.22932995298948 1.17594484053804 1.30270423982389 1.19628326486953 1.10130539653838 1.11020569281161 1.2271446664337 0.918080570896767 1.10152626774131 1.16799407061397 1.29903727243804 0.987976439869455 1.21074598834177 0.220842316229088 0.219828998051892 0.223210309451409 0.22243766277314 0.22038572220226 0.227204208145768 0.223650649230344 0.219828998051892 0.221408985024059 0.229195344515230 0.219828998051892 0.221149466760021 0.238450023822886 0.224944156291289 0.219828998051892 0.219828998051892 0.224675149683014 0.221901579036550 0.223487007439437 5 5 - 20902756 20903182 20902968.727 20902645 20903952 - gene protein_coding_gene TRUE TRUE AT5G51420.1 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein similar to membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related [Arabidopsis thaliana] (TAIR:AT5G55350.1); similar to wax synthase isoform 1 [Vitis vinifera] (GB:AAO18664.1) 0.0323985523588785 0.343401603544479 0.738022396862141 1 0.104696710372305 2.27716705245173 0.0323985523588785 0.0830291922281498 AT5G37010_at 1.72062182144843 1.76293268554318 1.71008619316194 1.52497300179083 1.13712890972737 1.46713162340067 1.85779316062181 1.49281246143679 1.73409476131643 1.90297315994663 2.1711040029967 2.98823002488197 1.96305658970249 2.10211924689619 2.82884518491852 2.31133024084935 2.31903155832014 1.79020844007148 1.50609461772409 0.272238845625274 0.266961674253085 0.263688973003162 0.265677624374513 0.263688973003162 0.269905433399821 0.27403869412119 0.266241414397131 0.28860770936889 0.263688973003162 0.263688973003162 0.269068260025992 0.266105234029882 0.263688973003162 0.272812750237371 0.263688973003162 0.270150160733804 0.270724183507337 0.263688973003162 5 5 - 14638089 14638485 14638283.444 14637962 14640171 - gene protein_coding_gene TRUE TRUE AT5G37010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65710.1); similar to OSIGBa0115K01-H0319F09.22 [Oryza sativa (indica cultivar-group)] (GB:CAH67916.1); similar to Os04g0528600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053377.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001068310.1) 0.0333666526365450 0.343342402754806 0.738065663586895 1 0.104676269121246 3.59599906917904 0.0333666526365450 0.0912721541809014 AT5G63290_at 2.35736203493734 3.24897600241689 3.04217752741595 3.20607945995024 2.95833580348505 3.39406045352415 2.53526716918371 2.61725477914119 2.4540110713262 2.59393888185759 2.56870181049422 2.49650109408989 2.42861702732459 2.33822272209755 2.37528311037760 2.80538776256822 2.89861928042252 2.38478888472815 2.21296486433315 0.205709163581856 0.20844532566844 0.209632111877355 0.208620876656267 0.209069708276416 0.206620326496138 0.212245686588049 0.208717591572257 0.219941971046934 0.204989463070500 0.208207034368741 0.204989463070500 0.211664239677623 0.207672658135154 0.210820516820459 0.208142635649915 0.207098682644667 0.207698417664646 0.209502355551779 5 5 - 25386576 25387115 25386860.636 25386471 25388147 - gene protein_coding_gene TRUE TRUE AT5G63290.1 coproporphyrinogen oxidase-related similar to putative oxygen-independent coproporphyrinogen III oxidase [Trichodesmium erythraeum IMS101] (GB:YP_721024.1); similar to Os12g0270100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066545.1); contains InterPro domain Putative oxygen-independent coproporphyrinogen III oxidase; (InterPro:IPR004559); contains InterPro domain HemN, C-terminal; (InterPro:IPR010723); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Elongator protein 3/MiaB/NifB; (InterPro:IPR006638) -0.0458358840923779 -0.343312898940862 0.738087226718853 1 0.104666083128626 5.39859922909939 -0.0458358840923779 0.174640988644908 AT5G52850_at 1.46048299599162 1.76262412432244 1.5492033767445 1.69688079427505 1.59975275948555 1.67048793936178 1.28732968511538 1.44380198238253 1.52166923367106 1.66694387204015 1.26243643654967 1.44324136177021 1.50302226661137 1.68268437207633 1.55999635376651 1.26725315628045 1.74665670899648 1.72651972890410 0.987777766439205 0.206194159302508 0.205466176226807 0.205030017222608 0.202927371204831 0.209526291395285 0.207620144436581 0.205771807682326 0.201775578576438 0.205251525742051 0.215233546484063 0.202813681479515 0.201775578576438 0.20706150143441 0.201775578576438 0.213140598842600 0.205044226797869 0.207966527798121 0.205225652250118 0.212035229845666 5 5 - 21432254 21432696 21432476.818 21432161 21434842 - gene protein_coding_gene TRUE TRUE AT5G52850.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G13650.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE83066.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0305182709764658 0.343155817622711 0.738202035015062 1 0.104611866252477 3.01687375162796 0.0305182709764658 0.0653461666709871 AT5G07840_at 6.86435248595927 7.1338307957732 7.69206566373715 7.75243114386814 8.39599957882481 8.14136173444748 6.79541629544802 6.70180314906427 7.18758490236915 6.66912973681044 7.64127685159638 7.77581287013265 7.89028135328683 7.6347904744389 7.2464353059277 8.0464150510322 7.79477092346048 7.68451478046574 6.84436091181266 0.187543910579310 0.173799817934376 0.184184215350484 0.18687410789655 0.183340743193021 0.183174296838960 0.177754717771524 0.176727238770905 0.182226673128508 0.179195167611305 0.174044049609034 0.175410770124215 0.176375174452403 0.182333466829177 0.177513066953176 0.174772413796473 0.175738160796014 0.173188363492019 0.174864092808869 5 5 - 2506769 2507264 2507062.364 2506657 2508374 - gene protein_coding_gene TRUE TRUE AT5G07840.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G61230.1); similar to Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats (GB:1N0R); similar to ankyrin 2,3/unc44 [Aedes aegypti] (GB:EAT33004.1); similar to Os02g0102600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045598.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) -0.0304757528627599 -0.340905726376024 0.73984732575848 1 0.103837903045989 14.7419804650353 -0.0304757528627599 0.0669939293267945 AT5G63940_at 5.6876716435082 5.72172101734941 6.10532290031726 6.24968331402057 6.23405899371311 6.50072836095107 5.48817189552986 5.45766597870892 4.3977771548863 4.31942762405954 5.32188448660375 6.44825268039176 5.46247314638068 5.69273117077285 5.91682243126236 5.96739008536688 5.59658793657306 5.36277435721998 4.42505078450698 0.198619739959058 0.200266074044377 0.194489561721907 0.195314762383347 0.199428661719923 0.199955899310721 0.198378451835769 0.195548457047126 0.201594675985082 0.200658984992897 0.193709408515078 0.193709408515078 0.199451912341858 0.199172221333753 0.195420790076610 0.196359560756967 0.198950880827203 0.193709408515078 0.201684948561873 5 5|0 +|/ 25607546 25608356 25607951.444 25605301 25608684 + gene protein_coding_gene TRUE TRUE AT5G63940.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G21590.1); similar to At5g63940 [Oryza sativa (japonica cultivar-group)] (GB:AAX96058.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0292282644538213 0.340700492172461 0.739997463339206 1 0.103767556173132 10.9815612086651 0.0292282644538213 0.0530695345211794 AT5G13410_at 8.74434264062366 8.65330704638282 9.29472770394775 9.19648565419573 9.79667673234468 9.39308702712705 9.43560197800246 9.19065729138843 9.2317526178788 9.34636949235474 10.3067865645467 10.4014340468329 9.86506392930831 10.3529293846755 10.3719342511644 10.3300421939326 9.91209247297665 10.178821124885 9.1894838233781 0.112471644115387 0.108366380068205 0.108986645715513 0.109205314727775 0.111014407623372 0.110064418651005 0.110926085051154 0.117857796225162 0.127675065503119 0.112627086478537 0.109086150522587 0.107955489204985 0.110830255814367 0.108712320861107 0.115859092323152 0.103677888393267 0.109134316330844 0.104769614700420 0.115452270045091 5 5|0 -|/ 4299851 4301338 4300279.111 4299737 4301783 - gene protein_coding_gene TRUE TRUE AT5G13410.1 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G19830.1); similar to Os07g0133700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058838.1); similar to FKBP-type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL50076.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) -0.0322553922599307 -0.339596803483051 0.740805053495498 1 0.103389961190798 18.9484890795403 -0.0322553922599307 0.084924101964638 AT5G07580_at 9.68651868065668 9.9131028535685 10.1375265934502 10.2776008187650 10.8314631254721 10.7557711885233 9.41591663409923 9.41314668619566 9.74440466056824 9.683264164851 10.8921462945375 10.4827162975738 10.0340287587429 10.5925672109807 9.73500533780943 10.3410966146098 9.1572956094586 10.1944525813262 9.6176555773998 0.124370576181698 0.123284337580440 0.126140527676146 0.124056158018818 0.126541122367772 0.129294363429373 0.125224989207878 0.130951990463561 0.135212967828071 0.135408556523380 0.118515544827656 0.122043149529646 0.120473908630183 0.132952290440377 0.121890074599023 0.118515544827656 0.138952178377677 0.134902012328944 0.136536306743906 5 5 + 2399757 2400322 2400037.273 2399505 2400602 + gene protein_coding_gene TRUE TRUE AT5G07580.1 DNA binding / transcription factor encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G61590.1); similar to AP2 transcription factor [Capsella rubella] (GB:AAR15465.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.0285729694784951 0.337596176556624 0.742269785535272 1 0.102708556343170 19.9841000171261 0.0285729694784951 0.0479264941824606 AT5G49690_at 1.60362445737096 1.66778603272602 1.87708233752136 1.88812678257352 1.85088873802087 1.70757748369810 1.70150836533020 1.48048873864471 1.94726857159346 1.94191569505110 1.95703414336929 1.60727535137311 2.28026468911247 2.01910316155760 1.67148809332329 1.48828580027625 1.97931941260527 1.99204669735288 1.71964589247911 0.194833780047336 0.194652362776621 0.188579972385749 0.197267604420664 0.192692633920548 0.188463180239420 0.188105233195881 0.189365976336301 0.198772796710218 0.189311125030973 0.193509518901800 0.193720793972837 0.191848980339077 0.192147082089229 0.189430726549486 0.198931108716151 0.190600229266134 0.189593638004675 0.191111744466434 5 5 - 20207312 20207758 20207578 20206881 20208616 - gene protein_coding_gene TRUE TRUE AT5G49690.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G65550.1); similar to putative anthocyanidine rhamnosyl-transferase [Capsicum annuum] (GB:AAM12787.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.0284227058778190 -0.33663890830274 0.742971015973775 1 0.102383906527262 3.59411647781696 -0.0284227058778190 0.046956997806577 AT5G57670_at 0.778451633048587 0.856767394143925 1.07252874070736 1.08079663247904 0.959832797811058 0.892019259107952 1.02531185349128 1.18270436334178 1.14449605089136 1.13886671629003 0.836573750602438 1.32992870547217 0.806475025617032 1.02231674422948 1.24979126770925 1.06661661830914 0.990360547871222 1.27740519088783 0.8191929553795 0.153139796282532 0.153992544243417 0.154891738555875 0.155909073866347 0.151626828249688 0.151566727797395 0.152370124553002 0.151129438417597 0.156069182915884 0.154769437981645 0.154214185025362 0.154676878390407 0.155833685913214 0.153797293496314 0.157393461381134 0.152993540536964 0.155554627453133 0.155259820880342 0.154000917704230 5 5|0 -|/ 23378018 23380866 23379486.25 23377626 23380983 - gene protein_coding_gene TRUE TRUE AT5G57670.2 ATP binding / protein kinase/ protein serine/threonine kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G18890.1); similar to Protein kinase; UspA [Medicago truncatula] (GB:ABE83392.1); contains InterPro domain UspA; (InterPro:IPR006016); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0275321511148895 -0.336415498005307 0.743134706602862 1 0.102308268390784 2.03436094536185 -0.0275321511148895 0.0326394100749576 AT5G05470_at 4.73881587148848 4.92477834540193 5.14346035065192 5.32586658532604 5.72319780283596 5.05407057851026 4.51486030534807 5.02424382897975 3.66958317526674 3.38024495718759 4.24131207241681 5.24584219600099 4.48269221511818 4.6972292814186 4.41711742595588 4.40060801822285 4.54503012509866 4.42900641294164 3.29118548589136 0.229449112786311 0.225020046706270 0.244224048096121 0.23512452715007 0.233217260215887 0.232477360155643 0.233302662202428 0.231555661446147 0.228557396134814 0.225715977899224 0.227472150194668 0.224497265371968 0.224304308371902 0.228725007665439 0.226803693089121 0.224304308371902 0.226506603436305 0.224304308371902 0.232508980512747 5 5|0 +|/ 1621237 1622079 1621489.429 1620459 1622341 + gene protein_coding_gene TRUE TRUE AT5G05470.1 EIF2 ALPHA (eukaryotic translation initiation factor 2 alpha subunit); RNA binding protein synthesis initiation factor eIF2 alpha similar to eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative [Arabidopsis thaliana] (TAIR:AT2G40290.1); similar to eukaryotic translation initiation factor 2 alpha [Oryza sativa (indica cultivar-group)] (GB:CAI29542.1); similar to Os03g0296400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049829.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain RNA binding S1; (InterPro:IPR003029); contains InterPro domain Eukaryotic translation initiation factor 2, alpha subunit; (InterPro:IPR011488) -0.0412253809714243 -0.335822896670544 0.743568964563355 1 0.102107874104743 9.05834133749043 -0.0412253809714243 0.152352680424423 AT5G56800_at 0.405339483764725 0.691243196781989 0.713745006259688 0.908719178256136 0.700737415360778 0.816018295331949 0.362627074816030 0.757659282460355 0.646898581863864 0.527208691286115 0.601832016360647 0.761553537608179 0.398648721896366 0.839895072290438 0.93325971844425 0.574963129228512 0.803195557201515 0.329681060119334 0.975434194505612 0.209671700684177 0.211686313910176 0.209366166446589 0.213456357084395 0.208417318604063 0.208417318604063 0.210269319106923 0.220624912669482 0.210528242227784 0.231029260001466 0.208417318604063 0.209947786238513 0.211500554102427 0.214702136657614 0.213062447039014 0.211535085461401 0.209251607239791 0.208417318604063 0.215188829451735 5 5 + 22990667 22991332 22991012.818 22990215 22991434 + gene protein_coding_gene TRUE TRUE AT5G56800.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56560.1); similar to Cyclin-like F-box; FBD [Medicago truncatula] (GB:ABE85215.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.0326078508826691 0.333358287803481 0.745376031258769 1 0.101278146275441 1.35545732872672 0.0326078508826691 0.0930474208890986 AT5G38580_at 1.31324837951044 1.42481660853259 1.74592182035200 2.36272671923137 0.728877625743662 1.27135152714323 1.30006493564534 1.30543204940421 1.05552175957691 1.77205054576878 1.43348944164533 1.09607392756679 1.64580055924897 0.925819085096922 1.52366612069612 1.50852767540578 1.51004754808316 1.06103083020923 1.42520900813589 0.204394946697225 0.210742534872651 0.209035014792711 0.218219644495635 0.207734207439651 0.210302320560662 0.208088260082320 0.212406889409986 0.213974043573311 0.209799999335611 0.206813249506674 0.204402339234951 0.210081543537669 0.206178931504372 0.21341251293294 0.210293987563998 0.209282288969549 0.209707737386693 0.204394946697225 5 5 - 15468414 15469038 15468696.273 15468394 15469072 - gene protein_coding_gene TRUE TRUE AT5G38580.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G38570.1); similar to FBD [Medicago truncatula] (GB:ABD32565.1); contains InterPro domain FBD-like; (InterPro:IPR006566); contains InterPro domain FBD; (InterPro:IPR013596) -0.0395220672184535 -0.33312898828147 0.745544237067907 1 0.101201254810411 2.80938029302264 -0.0395220672184535 0.143458297013677 AT5G25550_at 1.19370532018023 1.56984394011642 1.62505286386968 1.57735581520573 1.38330510664835 1.53913198263574 1.61576266967111 1.49343713394127 1.84406256891582 1.98747859783934 1.92370591946833 1.72267993821202 1.79946368651773 2.28006353029591 2.19687988849141 2.11081438043148 2.31002165715433 2.09157106253037 1.9109770624945 0.216712838967649 0.199156022839421 0.200387182456511 0.206330225673713 0.200990397928028 0.203817340130065 0.210712766239578 0.199227817785195 0.204179422329548 0.212894597971913 0.207343644402788 0.209589265420515 0.204909018642715 0.209103328270092 0.202550009257713 0.203863414652720 0.200805453278602 0.205847496819084 0.202285474921192 5 5 + 8895012 8895408 8895183.545 8894182 8895483 + gene protein_coding_gene TRUE TRUE AT5G25550.1 leucine-rich repeat family protein / extensin family protein similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT4G13340.1); similar to Os01g0594300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043463.1); similar to extensin precursor-like [Oryza sativa (japonica cultivar-group)] (GB:BAB91812.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.0304220194405509 -0.332588292699272 0.745940926814972 1 0.101020147104696 3.48398572951902 -0.0304220194405509 0.0740303543291964 AT5G43840_at 1.77180429402624 1.62158241675851 1.77176456365138 2.14188429173702 2.03028668781269 1.76282048310281 1.72558183278295 1.46794257889907 1.94917668634053 1.75696701072939 1.50119731278677 1.61199522429803 1.83474060312635 1.57038758834134 1.46447108692719 1.71734645164487 2.13106568263799 1.68048005470163 1.59181465857183 0.167925152121454 0.161992277421204 0.170538523513623 0.165875741402139 0.167680240256559 0.163129711729289 0.163597833648813 0.170207904406835 0.177386202408244 0.17068407369779 0.164461746111836 0.167463151636505 0.165510118975272 0.161992277421204 0.16772459319432 0.171947813582579 0.169943957563983 0.173197284800626 0.17264231247151 5 5 - 17642698 17643194 17642978.364 17642664 17643591 - gene protein_coding_gene TRUE TRUE AT5G43840.1 AT-HSFA6A (Arabidopsis thaliana heat shock transcription factor A6A); DNA binding / transcription factor member of Heat Stress Transcription Factor (Hsf) family Identical to Heat stress transcription factor A-6a (AtHsfA6a) (HSFA6A) [Arabidopsis Thaliana] (GB:Q1PDN3;GB:Q9FG80); similar to AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G22830.1); similar to heat stress protein [Oryza sativa (japonica cultivar-group)] (GB:AAP92754.1); similar to Os10g0419300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064617.1); similar to Os07g0178600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059028.1); contains InterPro domain HSF/ETS, DNA-binding; (InterPro:IPR002341); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0326529322007589 -0.332177226582237 0.746242563597201 1 0.100882651689709 3.51418170314897 -0.0326529322007589 0.0943856352356765 AT5G56090_at 2.60385377837589 3.91191293538304 4.2505503920842 4.97579372171688 4.61300926775006 3.84519572640243 4.08110044876315 4.55608056260599 3.97947934175887 3.39096123250328 3.98209532156206 4.04154373485656 4.04157929496739 3.68442718340957 3.97777083729852 4.45207387509174 4.12465745971382 3.86842304350056 2.69272669287351 0.219677350047963 0.210472576412863 0.21572394323304 0.214636444003102 0.210600563246506 0.217528971138111 0.206849062526628 0.210422495200138 0.213088425190266 0.207881615356313 0.206849062526628 0.207582296757829 0.215640641318602 0.222296724604747 0.223597627110385 0.206849062526628 0.212744682308955 0.212692629124135 0.214139612206145 5 5|0 +|/ 22732996 22733749 22733458 22731744 22734061 + gene protein_coding_gene TRUE TRUE AT5G56090.1 COX15 (CYTOCHROME C OXIDASE 15) Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor. similar to Cytochrome oxidase assembly [Medicago truncatula] (GB:ABE81168.1); contains InterPro domain Cytochrome oxidase assembly; (InterPro:IPR003780) -0.0670413637932598 -0.331701224937213 0.74659190525575 1 0.100723644085337 7.79266732055783 -0.0670413637932598 0.302333005147761 AT5G55900_at 3.13002842850966 3.5793069118047 4.40460784253571 3.49209681895999 4.51559750581601 4.73773042382601 3.70779125751912 3.62551593261392 3.55314181876174 3.52397238264229 4.61022764405476 3.95959558082691 4.33108023456719 4.21992877318914 4.07744504341915 4.17054518511415 4.09766014146585 3.70312542217826 3.68080376900875 0.231305433385437 0.226149541763483 0.221874268106798 0.221874268106798 0.22683461179569 0.228310675350141 0.223364148314426 0.22340860831134 0.243587281040405 0.226943315640428 0.228446484801764 0.223146726977150 0.223214867248167 0.236038257623247 0.226618437622499 0.22705225487779 0.229796952647703 0.228134883530719 0.223115375380085 5 5 + 22656048 22656790 22656466.455 22654757 22656987 + gene protein_coding_gene TRUE TRUE AT5G55900.1 sucrase-related similar to sucrase-related [Arabidopsis thaliana] (TAIR:AT4G26620.1); similar to Clostridium pasteurianum ferredoxin homolog [Solanum tuberosum] (GB:AAB33256.1); similar to Os02g0725100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047981.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Sucraseferredoxin-like; (InterPro:IPR009737); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.0451194664745798 -0.330452620139268 0.747508550701794 1 0.100307609311248 7.76517122015123 -0.0451194664745798 0.180727389805770 AT5G35540_at 1.18188035986233 1.33428738468212 1.49266549144283 1.88872646521619 1.21601462334475 1.47597628940150 1.22024552335684 1.52995079888226 1.13802165668207 1.40160738949592 1.66227577759524 1.00439929652835 1.49172418723358 1.29225409757551 1.42569323722181 0.949650958113072 1.34668630036454 1.31366168034498 1.25432446983760 0.195207470786725 0.195207470786725 0.195840089418618 0.197648562319732 0.198469277632614 0.204344292052399 0.195891256088263 0.199329990974119 0.200961482584342 0.195207470786725 0.200044324919979 0.197034455759410 0.195207470786725 0.201095751397156 0.199877517713773 0.200712953326889 0.206635133120364 0.201301224555156 0.207510267689424 5 5 + 13739371 13740193 13739720 13739367 13740223 + gene protein_coding_gene TRUE TRUE AT5G35540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27260.1) 0.0332996982732839 0.329959384573463 0.74787076556965 1 0.100143686216993 2.70519054896227 0.0332996982732839 0.101438618667867 AT5G02150_at 7.79382379889803 7.78411816551479 8.43191357072084 8.17704911745112 9.10312887279207 8.49687673062962 6.85888645188721 6.74201579560055 7.32896271871877 6.10977809213459 7.9644016588891 7.5805843305464 7.58906025581864 7.6202389881836 7.47082810994387 7.55458231793799 6.77027776299929 7.08699100294614 7.04056198888252 0.202555442296092 0.198953656675532 0.210803287489031 0.200232856440863 0.206046213252250 0.205048253824784 0.198698963864667 0.204459652449287 0.213917516968742 0.207144798521124 0.202591815770121 0.206845447929561 0.204954485650703 0.210076647424593 0.202758393771699 0.202381734346292 0.233035669440767 0.20221427679107 0.198590079679287 5 5|0 -|/ 424488 425221 424817.3 424288 426076 - gene protein_coding_gene TRUE TRUE AT5G02150.1|AT5G02150.2 binding similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G09350.1); similar to Os03g0271400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049691.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19270.1); similar to Os03g0822700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051736.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989)|similar to binding [Arabidopsis thaliana] (TAIR:AT3G09350.2); similar to Os03g0271400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049691.1); similar to putative stress-induced protein [Solanum commersonii] (GB:CAJ19270.1); similar to Os03g0822700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051736.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.0351063588516045 -0.329564584415299 0.748160738958642 1 0.100012649968137 15.0640039729302 -0.0351063588516045 0.115603947846200 AT5G09890_at 7.00336360235598 6.52316322063493 7.4946053333596 7.29182022402883 7.91611619154124 6.96864221017147 6.43752372714404 6.19060645382431 6.48789777783743 6.2698248032405 8.01027425041227 7.72125836496622 7.73949147754133 7.83410824800962 7.71956169183845 7.67620952822708 7.26889667360454 7.07547535510509 6.29140388451787 0.164873287097383 0.174044812966429 0.165992193075022 0.164873287097383 0.170194910385610 0.172882068210178 0.183759325766034 0.175381040481912 0.181439707688999 0.164927899935717 0.166569367965050 0.166146730739894 0.167360073015263 0.168610074963034 0.164873287097383 0.168735589420317 0.170768704428947 0.171780137384566 0.171265177319497 5 5 - 3085955 3087148 3086678.545 3085546 3089011 - gene protein_coding_gene TRUE TRUE AT5G09890.1|AT5G09890.2 protein kinase, putative|kinase similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.3); similar to protein kinase [Raphanus sativus] (GB:BAC76894.1); similar to Serine/threonine protein kinase [Medicago truncatula] (GB:ABE88922.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, C-terminal; (InterPro:IPR000961); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.3); similar to protein kinase [Raphanus sativus] (GB:BAC76894.1); similar to Serine/threonine protein kinase [Medicago truncatula] (GB:ABE88922.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, C-terminal; (InterPro:IPR000961); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.0467211739422109 0.328526526023696 0.748923368515856 1 0.0996688452078784 13.9684142556717 0.0467211739422109 0.191957276487723 AT5G20550_at 0.648398477066942 0.95374498888234 1.01174176657659 1.12838839068452 0.96237743764588 1.00073151163740 0.96789009079118 0.995780745433215 1.31302261844720 0.924592591019972 1.02654419978951 0.764984288657888 0.613227841147611 1.05023718386082 1.31187606028225 1.39491923603931 0.92966873994407 0.794538140771734 0.902223894775035 0.194697517106763 0.199841847305672 0.202350654862464 0.200804588042662 0.195537908851310 0.201428948476434 0.193838822110872 0.196049581646264 0.201203885116699 0.193838822110872 0.196963197170222 0.199944925556738 0.198610746217558 0.193838822110872 0.205084213924969 0.199798015217744 0.202760379499479 0.199211202532134 0.195787295199696 5 5 - 6952572 6953165 6952928.545 6952419 6953898 - gene protein_coding_gene TRUE TRUE AT5G20550.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT5G20400.1); similar to ethylene-forming-enzyme-like dioxygenase [Prunus armeniaca] (GB:AAB88878.1); contains InterPro domain 2OG-Fe(II) oxygenase; (InterPro:IPR005123) -0.0284826910732473 -0.328232020767920 0.749139783820442 1 0.0995714983515285 1.97481292411928 -0.0284826910732473 0.0571583209762348 AT5G63540_at 0.615857219598944 1.35591495186599 1.43840273118808 1.96529342203491 1.06160710854834 1.23863978151028 1.43960924600102 1.83971943440528 1.66617462619380 1.25500449496776 1.46951766135202 1.29497558347199 0.764459563883386 1.30665341324028 1.43066375555861 1.5729571978697 1.63999525547749 1.89064505872448 1.37589730538339 0.221861044780189 0.219314709304752 0.222380573618521 0.218083722402287 0.216250687540499 0.235064932670783 0.216343255112698 0.221810500550620 0.219567546772215 0.218859790675021 0.227719910498604 0.219975589066971 0.226033057456466 0.216371341092146 0.217819329547358 0.219574914222343 0.221907177883765 0.224277829252721 0.215414827908092 5 5|0 -|/ 25458263 25459112 25458629.1 25458009 25461662 - gene protein_coding_gene TRUE TRUE AT5G63540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19950.3); similar to OSIGBa0132D06.6 [Oryza sativa (indica cultivar-group)] (GB:CAH66440.1); similar to hypothetical protein LOC549050 [Xenopus tropicalis] (GB:NP_001016296.1); similar to OSJNBa0055C08.4 [Oryza sativa (japonica cultivar-group)] (GB:CAE02280.2); contains domain FAMILY NOT NAMED (PTHR14790); contains domain SUBFAMILY NOT NAMED (PTHR14790:SF1) -0.0437493675896453 -0.327860727713947 0.749412658448897 1 0.0994488915059172 2.79617660941689 -0.0437493675896453 0.174496088031662 AT5G49010_at 3.23698567208054 3.44331519371228 3.83032702709089 3.42875986143453 3.34155227370426 3.49175276689146 3.00108975547051 3.34975794520967 3.20862457496036 3.23829064943579 4.04791076743505 4.59431332726456 3.51897684328091 3.78982213000366 4.57201632509960 3.58733131084118 3.62341198031551 3.71049926578331 2.85744352236183 0.248405316340114 0.250298721886821 0.257236222892500 0.244134670001705 0.241966570979611 0.247652518925505 0.251202380305261 0.250224160181728 0.261184933915588 0.256219484157092 0.249440846994786 0.254694406882655 0.241966570979611 0.241966570979611 0.24489133822573 0.241966570979611 0.242356231142567 0.246610131848047 0.247923462852700 5 5|0 +|/ 19884128 19885229 19884722 19883457 19885591 + gene protein_coding_gene TRUE TRUE AT5G49010.1 DNA replication protein-related similar to PREDICTED: similar to SLD5 [Bos taurus] (GB:XP_874005.1); similar to SLD5 [Mus musculus] (GB:NP_077202.1); similar to Os05g0143400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054616.1); contains InterPro domain GINS complex, Sld5 component; (InterPro:IPR008591) -0.0331557489112109 -0.32773830418484 0.749502639139368 1 0.0994084950837973 6.90643664161875 -0.0331557489112109 0.102081388322586 AT5G50480_at 1.48407985791854 1.58330121352695 1.79440447505020 1.85307245130498 1.55498519713469 1.93737346218222 1.52315970831302 1.43054951732163 1.40762586678072 1.80944425294740 1.65206509963448 1.42423881269898 1.51388004416434 1.52935049096391 1.42242501708869 1.56013408868874 1.86271535574444 1.64376204332607 1.47721987011325 0.224901620021371 0.216318772159569 0.217878200435864 0.219776606237507 0.218086113752615 0.222394233462627 0.219659349254822 0.220711480815652 0.221842280649525 0.215930354741993 0.225734129873439 0.220284061671067 0.221648425397798 0.221809402018330 0.222082089529981 0.216291757208274 0.218169394209570 0.221573839319443 0.21822884168299 5 5 - 20575119 20575577 20575325.364 20574800 20575713 - gene protein_coding_gene TRUE TRUE AT5G50480.1 CCAAT-box binding transcription factor Hap5a, putative Identical to Nuclear transcription factor Y subunit C-6 (AtNF-YC-6) (NFYC6) [Arabidopsis Thaliana] (GB:Q9FGP7); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G63470.2); similar to CONSTANS interacting protein 2a [Lycopersicon esculentum] (GB:AAS67369.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.0295973904414570 0.326888870250405 0.75012707656047 1 0.099128611655516 3.21553308483694 0.0295973904414570 0.0709490863891995 AT5G26910_at 5.37644660945689 5.08838181950952 5.67745328851247 5.74043795326267 5.96986154556995 6.06353946693126 4.94990107225565 4.85888779398092 6.18221247140381 5.69515670201011 7.57457547519789 7.30595625859306 6.66917373988075 7.27272692821413 7.11109895237377 6.9934991041742 6.39801089193758 6.65317284393984 5.52261999636083 0.207926676935882 0.204333780601834 0.212246399685957 0.20890694121682 0.208791014383016 0.219769546522637 0.211398823666584 0.213938449076619 0.220372615614524 0.216354402312824 0.204333780601834 0.204333780601834 0.206237812100581 0.205657919824957 0.207948992044101 0.204333780601834 0.210950184133827 0.204364903714351 0.216508330402443 5 5 - 9466183 9466711 9466470.364 9465932 9470406 - gene protein_coding_gene TRUE TRUE AT5G26910.1|AT5G26910.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58650.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.1); similar to srpA [Streptococcus cristatus] (GB:AAF34780.1); similar to Os03g0831700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051796.1); similar to Os03g0302900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049873.1); contains domain Nitric oxide (NO) synthase oxygenase domain (SSF56512)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.1); similar to Os03g0831700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051796.1); similar to Os03g0302900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049873.1); similar to Subtilisin-like serine protease [Pediococcus pentosaceus ATCC 25745] (GB:YP_803612.1); contains domain Nitric oxide (NO) synthase oxygenase domain (SSF56512) -0.0282251901673203 -0.326515030645931 0.750401953783363 1 0.0990056589770037 11.8642502757918 -0.0282251901673203 0.0558104271545149 AT5G26210_at 7.03372539886888 7.06453936643415 8.07245230817761 7.95876804246755 8.86414535468374 8.57026724162752 7.47178993739495 7.77901822794892 6.56068499514367 7.24891528513733 8.38748798737762 8.20146731568163 8.10788274330853 7.7662675442441 7.71568271481995 8.17117925119707 8.0989193784461 7.94358360955178 7.51182245855157 0.171596941102024 0.174802365442606 0.176580708573606 0.177101762741199 0.179649972293723 0.176448717928125 0.181683278709795 0.174395843832949 0.181960830896902 0.176445074736809 0.182521797369789 0.175477050496042 0.189955710648828 0.185233498104611 0.183971085834765 0.171755197888513 0.190597381976256 0.177238123678176 0.176906425113830 5 5|0 -|/ 9158570 9159336 9159050.222 9158323 9160386 - gene protein_coding_gene TRUE TRUE AT5G26210.1 PHD finger family protein Identical to PHD finger protein At5g26210 [Arabidopsis Thaliana] (GB:O81488;GB:Q8LBJ5); similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G20510.1); similar to PHD4 [Glycine max] (GB:ABI97243.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) 0.0300607355310019 0.32608357779523 0.750719238136069 1 0.0988639289431587 15.4299381002117 0.0300607355310019 0.0763457830478631 AT5G22220_at 2.43822115086335 2.55450701505555 3.38563153460229 3.16082389470856 2.93923530080186 3.03695533312715 2.62966445475782 2.66922568175123 2.38599386291041 2.77875317019209 2.62330621006616 2.40404781442363 2.87672554035317 2.88569305397481 2.66483878464993 2.8006059064021 3.01962516862261 2.21119493006801 2.63347794729803 0.208586549551167 0.208586549551167 0.212196011741341 0.217253788427696 0.221614792797104 0.217106221851398 0.210508031155339 0.210135861006372 0.21207342014379 0.225285084379432 0.210119657523489 0.210248735486637 0.209212331313994 0.216235497053935 0.218720288025507 0.217492086794524 0.218571884554786 0.219106257058990 0.208586549551167 5 5|0 +|/ 7363125 7364087 7363656.6 7360538 7364457 + gene protein_coding_gene TRUE TRUE AT5G22220.2|AT5G22220.3 E2F1; transcription factor Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. similar to E2F3 (E2F TRANSCRIPTION FACTOR-3), transcription factor [Arabidopsis thaliana] (TAIR:AT2G36010.1); similar to E2F-related transcription factor 1 [Thlaspi caerulescens] (GB:AAM90620.1); contains InterPro domain Transcription factor E2F/dimerisation partner (TDP); (InterPro:IPR003316); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0275210272012533 -0.325559282785076 0.751104862409922 1 0.0986919476018314 5.49436454714359 -0.0275210272012533 0.0474482855681934 AT5G51340_at 6.97851905801431 7.07759157203611 7.72981139498788 7.62063255275928 8.29279656823622 7.54582088242516 6.66210042044116 6.42717772473842 5.55625200669701 5.6945190402265 6.52751720989061 6.81883346073081 6.693097482008 6.77812053779461 6.57655968286228 6.41535048343205 6.50986530659262 7.11709697029323 5.78977273012759 0.164281579990222 0.163463141855284 0.167029943246596 0.171644318337368 0.164627739091378 0.170055713983794 0.165916988983743 0.166302223069025 0.177419831102811 0.171862627291053 0.165373670655396 0.164217366547577 0.159784601264262 0.166958980748165 0.163695931139332 0.160831911452984 0.171477012734382 0.161340539803368 0.171072495809267 5 5 + 20883419 20884333 20883810.182 20880169 20884596 + gene protein_coding_gene TRUE TRUE AT5G51340.1 binding similar to Os04g0347600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052515.1); similar to PREDICTED: similar to CG4203-PA [Apis mellifera] (GB:XP_394668.2); similar to OSJNBa0020I02.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD40351.2); contains InterPro domain Tetratricopeptide TPR_2; (InterPro:IPR013105); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0377522472227925 -0.325124214753755 0.75142491350188 1 0.0985494404941593 13.4716744720636 -0.0377522472227925 0.137890660978772 AT5G36080_at 1.39666143041715 1.30945159666644 1.50573144923771 1.75654646486101 1.61049269571090 1.65623287398952 1.63431259286347 1.57756928441350 1.82007253311715 1.39468526120037 1.48763633572009 1.52801248393507 1.64663099783209 2.03162558387946 1.05311518036729 1.52820194519300 1.83518343789065 1.68816503172026 1.53418420851485 0.184575430983365 0.1895286324907 0.183273638196629 0.187135021484171 0.182391904507241 0.189720904773464 0.181400107588477 0.181002032295319 0.190073965438751 0.185003336591762 0.183458271363061 0.187054271059152 0.182592691250868 0.190546321881968 0.185305387060823 0.181002032295319 0.181002032295319 0.191861701520556 0.18124606379592 5 5|0 +|/ 14201668 14202482 14201975 14201653 14202507 + gene protein_coding_gene TRUE TRUE AT5G36080.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G32904.1) -0.027485803480408 -0.324975184938819 0.751534556272995 1 0.0985006684726692 3.14727581960898 -0.027485803480408 0.0476531380806143 AT5G52000_at 1.56130343919717 1.27224483503802 2.02960530107734 2.16679806479874 1.34141083628831 1.81594416016910 1.25565055451532 1.74936708889714 1.87120120663309 2.10552979425919 1.83309116575523 1.95280461993494 1.75757390107616 1.73547143394157 1.40184128307044 2.05701728312714 1.75052953244024 1.95063216655710 1.97707950539742 0.224227362208493 0.217469421891857 0.216989779757245 0.231083187997129 0.221539776417233 0.224521986357957 0.222158263698731 0.220233418330151 0.233820422665757 0.221753678955311 0.224464865275607 0.225098140146577 0.221777450295692 0.216989779757245 0.220807657006932 0.223446318512267 0.230681698023915 0.227700407900595 0.221861387300213 5 0|5 /|- 21136264 21136979 21136731 21136250 21138345 - gene protein_coding_gene TRUE TRUE AT5G52000.1 importin alpha-1 subunit, putative similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.2); similar to importin alpha 2 [Capsicum annuum] (GB:AAK38727.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.0366194940106104 -0.324140372791578 0.752148842514795 1 0.0982278696396328 3.54377737266485 -0.0366194940106104 0.130803985855167 AT5G04370_at 0.92018624888817 1.38971440721751 1.77380072781245 1.69008640102541 1.18350833100304 1.18274972757460 1.44289655399838 2.04701728425433 1.08122400987482 1.71692274328764 1.14702775145043 1.12989350193238 1.80317601248114 1.72324006504047 1.20316593622538 1.53830936704904 1.71501428223359 1.89494123660325 0.979035614098515 0.187623626991932 0.188526461000155 0.194011979481534 0.198505805094819 0.187623626991932 0.195432458267968 0.187623626991932 0.196822495779774 0.192144985646898 0.189879875437959 0.194887888931465 0.190095344767024 0.201882612298162 0.194186348350628 0.204558764263971 0.188802980140700 0.195641160630718 0.189838709920010 0.207827834593400 5 5|0 +|/ 1233152 1233835 1233468.9 1231698 1234148 + gene protein_coding_gene TRUE TRUE AT5G04370.1|AT5G04370.2 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT3G11480.1); similar to carboxyl methyltransferase [Bixa orellana] (GB:CAD70190.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.0368942224007816 0.323556442472617 0.752578627563911 1 0.098037461924948 2.84294836432871 0.0368942224007816 0.133198951877870 AT5G49800_at 1.78745422453592 1.37041803976871 1.22759589208301 1.51150719444700 0.833999396260442 1.56768980959799 1.54219707144047 1.73609529698132 1.67471561648521 1.32567644856404 1.86727324374963 1.82476039468050 2.30420493789846 2.33136318147677 2.16886737895462 2.27570635112256 1.83514707349754 2.36923181331235 1.44474751142818 0.231204615445733 0.224886642887060 0.229635891807362 0.231331845305411 0.227660346577778 0.237247176944485 0.229835888151978 0.228065993095747 0.224886642887060 0.23413317547653 0.224922494186577 0.234883827395640 0.229362399489298 0.227143635185142 0.229824001042955 0.228416055702005 0.230612160907071 0.226804025519343 0.224886642887060 5 5|0 -|/ 20252338 20253196 20252829.5 20251868 20253410 - gene protein_coding_gene TRUE TRUE AT5G49800.1 similar to hypothetical protein LOC402943 [Danio rerio] (GB:NP_991209.1); similar to Os11g0245500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067602.1); contains InterPro domain Lipid-binding START; (InterPro:IPR002913) 0.0405270044628212 0.323474981692122 0.752638591417782 1 0.0980109259485746 3.24901086013721 0.0405270044628212 0.157700467183217 AT5G21100_at 6.43456849053335 6.99054712908216 8.60555038343914 8.664434690503 8.82915790571658 8.50677845451253 9.23395277458135 9.12496305910533 8.70449033035268 8.8508259408264 9.7905499615425 9.56461754486252 9.53045096251228 9.62416608302654 9.42341290065305 9.86419066170668 9.59538025169766 9.74937301530993 8.85369115357113 0.182435240340195 0.166520055643335 0.154163510916618 0.154487124257689 0.156087241518973 0.151382544169251 0.152294053548786 0.150495704625821 0.16085410382048 0.152951619591993 0.152162945044785 0.146809607548212 0.146809607548212 0.156435451599473 0.150499857572855 0.155018638852802 0.156844208662297 0.152190322385029 0.159909754277393 5 5 + 7170138 7170609 7170311.545 7168186 7170930 + gene protein_coding_gene TRUE TRUE AT5G21100.1 L-ascorbate oxidase, putative similar to L-ascorbate oxidase/ copper ion binding [Arabidopsis thaliana] (TAIR:AT5G21105.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20933.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20931.1); similar to ascorbate oxidase [Brassica juncea] (GB:AAF20932.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) -0.0340712532088108 -0.322736445691724 0.753182311062442 1 0.0977706452039682 17.5216291847245 -0.0340712532088108 0.113266475564818 AT5G27050_at 1.62989178819356 2.02604581624852 2.24085431608871 2.36983259820335 1.66811339709964 1.89067660467626 1.53676216083537 1.85170227585589 2.11756055360255 1.9869050868366 1.78777581793887 2.2026553216178 2.17936648780750 2.05000769443657 1.89176249668828 2.06599938883318 2.05266811472828 2.04035278716618 1.68944085827247 0.187745077435423 0.187984811884438 0.192598142226290 0.180750613223128 0.188911204807415 0.185593968549632 0.187860841440681 0.187891784334969 0.185050719160500 0.183766328408087 0.184324941501478 0.188451312381517 0.189247605744207 0.183146392653237 0.180750613223128 0.185823591439665 0.191163498876514 0.184028750041705 0.180750613223128 5 5 + 9520400 9520616 9520545.091 9520279 9520641 + gene protein_coding_gene TRUE TRUE AT5G27050.1 MADS-box family protein similar to MADS-box family protein [Arabidopsis thaliana] (TAIR:AT5G27580.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAS07192.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) 0.0321297520142121 0.322202897545483 0.753575203448665 1 0.0975973913007058 3.88429770959481 0.0321297520142121 0.098244927894675 AT5G46020_at 10.3437657322307 10.5175901433349 10.9684834456838 11.0104241387526 11.2702796687359 11.0880709741390 10.3939649531562 10.6007698964998 10.6182586650446 10.7632925940358 11.2869950725005 11.2142719817228 11.3024600498189 11.3605077569261 11.2033290655476 11.2919475552262 11.1159119422481 11.0819522153766 10.8034924504854 0.088375164189006 0.0866477495687255 0.089505588492291 0.088574264201969 0.0882551807603811 0.0946592621636017 0.0899012809787047 0.0866477495687255 0.0965666576439183 0.0875499691560301 0.0874758488041485 0.0871516796820395 0.0866477495687255 0.0866477495687255 0.0894613044124393 0.0869213773546936 0.0931493173815612 0.0872708261134388 0.0867455159419586 5 0|5 /|- 18680478 18680970 18680703.4 18680073 18682066 - gene protein_coding_gene TRUE TRUE AT5G46020.1 similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G18540.1); similar to Os01g0752800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044269.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAT01307.1); contains domain SUBFAMILY NOT NAMED (PTHR22055:SF4); contains domain FAMILY NOT NAMED (PTHR22055) -0.0279192436209226 -0.322017317385871 0.753711877508263 1 0.09753719545435 21.7544285481213 -0.0279192436209226 0.0568563560788734 AT5G41270_at 2.52987503207820 3.43325420676248 3.14290826138055 3.89998830122629 4.27857433098224 4.51909766915947 2.61591286943635 3.23878027218476 3.26636367407809 3.06712652857607 3.31010464922109 2.74911198996514 3.29128139654366 2.84073056813665 3.03151262563678 3.36862133766321 3.50208083804480 3.75976912678786 2.88260785275238 0.234516711286659 0.223356050513945 0.228118354083706 0.224604210763523 0.238883864408154 0.246023259184007 0.228183872836139 0.225346528725071 0.226274525795515 0.227750567118205 0.225191972304300 0.225918621465152 0.234337602242242 0.235228463968011 0.223356050513945 0.226106249424464 0.231435095764984 0.223356050513945 0.236480786690033 5 5 + 16525492 16525823 16525669.625 16524937 16526107 + gene protein_coding_gene TRUE TRUE AT5G41270.1 similar to Os01g0541600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043269.1); similar to Os01g0531000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043240.1) 0.0526860815332935 0.320216901078315 0.755038287453398 1 0.0969549651827737 6.609140993719 0.0526860815332935 0.234428677588853 AT5G14420_at 5.97971358143888 6.11199266069088 6.4158828904326 6.6979568549634 7.92951079631453 6.66278356837252 5.59859882192929 5.56434833518038 5.74294424358162 5.22754278109509 6.67950524252107 7.14232599776115 6.27767770812648 6.7908885534904 6.15983960152379 6.6736177600339 5.35396904028143 6.06531268261475 5.61437021729692 0.255613180157269 0.245000500000555 0.261330291784034 0.248120975598874 0.247514276690070 0.274924426337196 0.260031366622636 0.249244855181859 0.258994236808359 0.248037272258030 0.243955739209642 0.243955739209642 0.243955739209642 0.247600181656941 0.258344036098074 0.243955739209642 0.270339042222803 0.252012830730762 0.248169030423274 5 0|5 /|- 4648713 4649158 4648849 4648114 4651312 - gene protein_coding_gene TRUE TRUE AT5G14420.1|AT5G14420.2|AT5G14420.3|AT5G14420.4 copine-related similar to copine-related [Arabidopsis thaliana] (TAIR:AT3G01650.1); similar to RING-finger protein [Capsicum annuum] (GB:AAX20031.1); contains InterPro domain Copine; (InterPro:IPR010734); contains InterPro domain von Willebrand factor, type A; (InterPro:IPR002035); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0510041879677902 -0.318939921090731 0.755979572161291 1 0.0965439452750867 12.3306873489746 -0.0510041879677902 0.225823701081000 AT5G59190_at 1.53477472192475 2.01359768864252 2.02477793492354 2.29033769879565 1.83379994628409 2.01001531098587 1.97915840842908 1.77875748164384 2.37417659076336 2.57480640859855 2.22555110227892 2.38417623970703 2.21571982860312 2.38052171616562 3.03706433864167 2.70935999698103 2.98003564439121 2.29378644258367 2.23242983823090 0.200696395356703 0.195125386547512 0.193472172361791 0.193836640506907 0.198311569917349 0.189384600759038 0.203299431801682 0.191835051597854 0.196611533400647 0.192364257633277 0.196089998874703 0.193322563775612 0.198421254038290 0.196419600065581 0.194823825103124 0.189447301758903 0.211669921589689 0.193253894541473 0.206792602908851 5 5|0 +|/ 23905217 23905872 23905615.9 23903081 23905899 + gene protein_coding_gene TRUE TRUE AT5G59190.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G46840.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G46850.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59100.1); similar to subtilisin-like protease C1 [Glycine max] (GB:AAN12272.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259) -0.0326528118663026 -0.318729236846016 0.756134911261432 1 0.0964762872213678 4.39419299538699 -0.0326528118663026 0.105408021594983 AT5G49070_at 0.759743687778149 0.567543299573088 0.670062444438348 0.766290727398069 0.69868749390602 0.313368302640243 0.404264424461793 0.522960638991198 -0.00208892647808724 0.761295621948962 0.87278039558476 0.574764944407277 0.647782353100122 0.385641380424526 0.192053231624194 0.677755513836044 0.762424370072022 0.634260227509011 0.69364838746028 0.228909035050906 0.225617440369573 0.230717263658161 0.226216804193392 0.235450702610346 0.225617440369573 0.229170085342297 0.22823430283288 0.239038001669185 0.230338092055195 0.228808722472341 0.230081667706604 0.227434006371493 0.229300377975705 0.23872955332998 0.229644447197470 0.229626934103573 0.230770129700166 0.226478817591323 5 5 - 19905988 19906534 19906216.364 19905977 19907371 - gene protein_coding_gene TRUE TRUE AT5G49070.1 beta-ketoacyl-CoA synthase family protein Identical to Probable 3-ketoacyl-CoA synthase 20 (EC 2.3.1.-) (KCS-20) (Very-long- chain fatty acid condensing enzyme 20) (VLCFA condensing enzyme 20) (KCS20) [Arabidopsis Thaliana] (GB:Q9FH27); similar to CUT1 (CUTICULAR 1), acyltransferase [Arabidopsis thaliana] (TAIR:AT1G68530.1); similar to Os03g0220100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049406.1); similar to 3-ketoacyl-CoA synthase [Gossypium hirsutum] (GB:ABA01490.1); contains InterPro domain Chalcone and stilbene synthases, N-terminal; (InterPro:IPR001099); contains InterPro domain FAE1/Type III polyketide synthase-like protein; (InterPro:IPR013601); contains InterPro domain 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; (InterPro:IPR013747); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase; (InterPro:IPR012392) 0.0295018749231665 0.317050508218598 0.757373054187363 1 0.095938753922492 1.12672404225509 0.0295018749231665 0.0790692311848397 AT5G41960_at 7.21799938953225 7.33375972478435 8.21855647709376 8.26996218478928 8.41132939983467 7.92996143901005 6.8109082708398 6.99346789227255 5.50035680618651 6.39290972752147 7.02623820079878 6.79904961378799 7.24960356330363 7.09599174834617 6.93008220888386 7.47368571319626 7.3055240933335 6.81203256142572 6.38896405621498 0.213897711940087 0.202820487353209 0.217266502680558 0.212520391122534 0.212984927269296 0.219004962204526 0.203012662698791 0.201800630979058 0.2266652771139 0.215843525240291 0.202545746349260 0.205053236363897 0.204564375413494 0.212465389509288 0.201808512480821 0.204375638039337 0.208285202900695 0.218881421556242 0.215515441017203 5 5|0 +|/ 16807099 16807887 16807423 16806942 16808270 + gene protein_coding_gene TRUE TRUE AT5G41960.1 similar to Os04g0585600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053679.1); similar to H0307D04.4 [Oryza sativa (indica cultivar-group)] (GB:CAH66859.1) 0.0307967354472420 0.316345500196494 0.757893244725875 1 0.0957138378315602 14.2385445103657 0.0307967354472420 0.091749354384451 AT5G28550_at 1.34427037205933 1.49413437944638 1.66443984251632 1.96355722355052 1.73787604033824 2.35486278886061 1.72169192593996 1.49555202901395 2.18400818438881 2.74510814382036 2.65796517421476 2.13727950728098 2.05231580373779 2.04864689000879 1.72433429142491 2.05153173826159 2.47876203477257 2.30946750286761 1.68327161194885 0.207751783403141 0.204756976438829 0.20750632451096 0.202840935270446 0.214725841624146 0.218247805272110 0.20837392081632 0.209332939320956 0.206439540691065 0.204200722576149 0.205899729755340 0.205155021076810 0.214415205510591 0.207424412413394 0.210409528739376 0.208305601934729 0.202840935270446 0.214640296095902 0.211091913784969 5 5|0 -|/ 10557744 10558786 10558345.3 10557726 10559783 - gene protein_coding_gene TRUE TRUE AT5G28550.1 peptidase similar to AESP (ARABIDOPSIS HOMOLOG OF SEPARASE), peptidase [Arabidopsis thaliana] (TAIR:AT4G22970.1); contains InterPro domain Peptidase C50, separase; (InterPro:IPR005314) 0.0352494281519112 0.315900176862571 0.7582218916276 1 0.095572020823637 3.91538166581923 0.0352494281519112 0.127608581069005 AT5G46440_at 1.22871172869949 1.74801318469752 2.21854886921013 2.19921174326544 2.75932555752626 1.95484389988224 1.97782367180060 1.66661626461224 2.31259880122223 1.85158237184373 2.06790200319794 2.00187430610026 2.22300973030354 2.05945045876334 1.78712171154954 1.71326163092801 1.88654774450761 1.83432912502625 2.28590741418690 0.206336827940607 0.214588244003059 0.206438370216653 0.210198887201045 0.211673881980333 0.212680932161824 0.210794818911696 0.208316504347716 0.207647100613626 0.213483576120837 0.214160513059276 0.208013942676451 0.211978354272345 0.213966256962149 0.207702895111629 0.207593986575932 0.217787617540940 0.216079796467202 0.209009849948460 5 5 + 18852105 18852290 18852194.636 18851870 18852380 + gene protein_coding_gene TRUE TRUE AT5G46440.1 similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G46460.1) 0.0420389519512783 0.315307430245647 0.758659414108673 1 0.0953835593501163 4.01749517390241 0.0420389519512783 0.174269458919051 AT5G20410_at 3.34436981506293 3.2314962624968 3.86757747590393 4.08230749864584 4.34065412840656 4.49774479818542 2.9843613576064 3.25467300702001 5.32458707888064 3.78373427991779 5.72801448225405 4.6308808932869 4.85039135092852 5.24070669061076 4.63025139022275 5.38577368021755 4.95545464875185 4.89004426918393 4.08476594188189 0.202887031906225 0.202127809892357 0.210508051255859 0.199690843695995 0.203195730262023 0.201950265503475 0.20194303418277 0.199690843695995 0.207327231192425 0.199690843695995 0.201406682198277 0.203211468925250 0.204213099479016 0.203489572224617 0.20606799686039 0.203584003887823 0.201326606046163 0.207370091025820 0.202471565798202 5 5|0 +|/ 6897746 6898534 6898257.111 6896578 6898785 + gene protein_coding_gene TRUE TRUE AT5G20410.1 MGD2 (monogalactosyldiacylglycerol synthase 2); 1,2-diacylglycerol 3-beta-galactosyltransferase/ transferase, transferring glycosyl groups Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues similar to MGDC (monogalactosyldiacylglycerol synthase type C), 1,2-diacylglycerol 3-beta-galactosyltransferase [Arabidopsis thaliana] (TAIR:AT2G11810.1); similar to Monogalactosyldiacylglycerol synthase [Medicago truncatula] (GB:ABE87260.1); similar to Monogalactosyldiacylglycerol synthase [Medicago truncatula] (GB:ABE78336.1); contains InterPro domain Monogalactosyldiacylglycerol synthase; (InterPro:IPR009695) 0.0282886761182988 0.314943258297294 0.75892826336427 1 0.095267944336046 8.41871576420372 0.0282886761182988 0.0684814035465162 AT5G01680_at 1.15685404691286 1.03297712189967 1.22394664205601 1.29053117987494 0.773489276451557 1.44931772741656 0.881283539321272 0.655682639777429 1.15627955285867 1.1078284739959 1.21040764593048 0.898992374621175 0.533437600813897 1.35768143453701 0.752267921747221 0.94907052476827 1.11783054391804 1.16256777608458 0.869100895460999 0.208503140334209 0.205842435549246 0.212997846204257 0.211346461146353 0.208556315629848 0.214130325480157 0.205386176574133 0.207051778910262 0.213399088267364 0.208797475662310 0.204378965509273 0.206219637913958 0.206164168712937 0.206768145018851 0.209120636721440 0.206045053750686 0.205799423193585 0.222246455321112 0.212115758761232 5 5 - 254021 254638 254360.909 253993 256637 - gene protein_coding_gene TRUE TRUE AT5G01680.1 ATCHX26 (cation/hydrogen exchanger 26); monovalent cation:proton antiporter member of Putative Na+/H+ antiporter family similar to ATCHX27 (cation/hydrogen exchanger 27), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G01690.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84887.1); similar to Os05g0485000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055872.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.0348006256835823 0.314218725952237 0.759463247412811 1 0.0950383138248025 2.07910274766767 0.0348006256835823 0.125678541903896 AT5G60140_at 1.44275495421649 1.59412037400092 1.89647876545139 1.76904386236180 1.24008591385181 1.39983024669954 1.32457977313883 1.54466400894536 1.12008507920905 1.64709687084181 1.43243049047463 1.62289160167782 1.61360507535011 1.59392856628562 1.46025634297413 1.38793459889269 1.60996845702182 1.32157425338004 1.58204142462723 0.192014853532532 0.19456231322128 0.1896077405387 0.197839912317993 0.190487900384721 0.196472849901486 0.1900679288067 0.192110853768142 0.194206920197314 0.192052484386675 0.1896077405387 0.196198542245800 0.204677970781681 0.202696486936448 0.195544850088017 0.191442201847688 0.195510358603124 0.193263389871570 0.194302586578608 5 5|0 -|/ 24231317 24231990 24231571.8 24231303 24232679 - gene protein_coding_gene TRUE TRUE AT5G60140.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G60130.1); similar to hypothetical protein 1.t00028.part_1 [Entamoeba histolytica HM-1:IMSS] (GB:XP_657586.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.0273176075725735 -0.313859896118432 0.759728251020406 1 0.094924779618138 3.00397713640817 -0.0273176075725735 0.0582005417924296 AT5G04380_at 0.976405386802585 1.30423992697755 1.50080999589635 1.81398557861979 1.01531196924619 1.2397557563242 1.09419532837909 1.02369547682935 1.33980195660609 1.26301625552470 1.24899944621026 0.851026042545272 1.12814203215937 1.29106746965489 0.922449527416873 0.707085486963917 1.22833701348572 1.67050700297530 1.36175005546448 0.175128618658174 0.172503610899656 0.164739266098843 0.163191588866145 0.165576070681381 0.176531034796897 0.165955113281272 0.163779654181192 0.175356144378840 0.174817376852730 0.168980415840844 0.166564408970401 0.172191131937573 0.165900990511419 0.166953239988204 0.166608489326803 0.167830530919519 0.172344956408776 0.188824209617861 5 5|0 +|/ 1235764 1236252 1236072 1234884 1236318 + gene protein_coding_gene TRUE TRUE AT5G04380.1 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to S-adenosyl-L-methionine:carboxyl methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G04370.2); similar to S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase [Petunia x hybrida] (GB:AAO45012.1); similar to S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase [Petunia x hybrida] (GB:AAO45013.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) -0.0301130275525012 -0.313120849832532 0.760274154660778 1 0.0946913451330037 2.47228718165516 -0.0301130275525012 0.088393448255424 AT5G37620_at 1.79251782831031 1.53677874992782 2.07696751173594 2.01649647822539 1.54369163721541 1.88349243962803 1.24369940004171 1.92673673809956 1.42115758664663 2.01015210737981 1.1255242583532 1.55269123942498 1.85874186794011 1.57314323762058 1.74584053783412 1.67032423643096 1.53672970238444 1.97751736198383 1.67742431828421 0.187109974414206 0.190074261765274 0.184076580144527 0.184076580144527 0.186652088042026 0.187523641527739 0.190138893983399 0.193505924413911 0.189555294934487 0.192410796975101 0.189133838929087 0.196074467198127 0.188292760219787 0.195214961589961 0.188906403626404 0.185334684341194 0.188393888329591 0.190903099257514 0.191885297307554 5 5 - 14959680 14960165 14959891.364 14959626 14961584 - gene protein_coding_gene TRUE TRUE AT5G37620.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G19650.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G19660.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G04680.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) -0.0365933116678754 -0.313025852344935 0.76034433541169 1 0.0946613784430844 3.41903529423973 -0.0365933116678754 0.139635256309580 AT5G48720_at 2.88099865475651 3.49501613521311 3.96642532031638 4.04913035596583 3.97894114719263 3.41776364743648 3.25350483994602 2.97028363372508 3.08523301192434 2.64948893159174 3.03415595966845 3.17323702414551 3.19012518661017 2.96554801311731 3.14720898484636 3.03376819716832 3.55971263774446 3.70961677998951 3.12350794018071 0.200511563094825 0.203537634939906 0.202566266027999 0.200951216926278 0.201117862247718 0.1992090333099 0.200122167929284 0.205351247582771 0.201830631086277 0.202311796885533 0.200189893051110 0.198323770311248 0.199456929047739 0.198379293450135 0.206960295149933 0.203599831627092 0.197871938876730 0.202197047694080 0.197871938876730 5 5 + 19777958 19778752 19778429.545 19776835 19778947 + gene protein_coding_gene TRUE TRUE AT5G48720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01990.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD16868.1); similar to Os09g0401900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063123.1); similar to Os01g0918100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045205.1) -0.0384680335294937 -0.312899301953677 0.760437829836472 1 0.0946214723258293 6.59121541305743 -0.0384680335294937 0.152738954795440 AT5G03455_at 9.40959617436568 9.3474953320965 10.2004254505254 10.0555872798236 10.4109844695717 9.95162040193497 8.80454359900858 8.8491511140789 9.13750624212242 9.14501381261202 9.78669327228332 9.4736049342747 9.46791257319537 9.73848571423907 9.34652212948337 9.45467793676026 9.34411606203607 9.57078963624024 8.94539043306778 0.113289650656604 0.112303621110033 0.115834103343342 0.115326804648112 0.116843109068301 0.116351640315886 0.113622993146038 0.113785018758624 0.115400171664798 0.115972623479045 0.111274631206578 0.107799574897805 0.112929813726177 0.112609275843547 0.110700426930494 0.111913213040191 0.119548046179191 0.115084247447902 0.117275708250538 5 5|0 +|/ 862596 863921 863407.5 862558 864107 + gene protein_coding_gene TRUE TRUE AT5G03455.1 CDC25 Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance. Identical to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25) (CDC25) [Arabidopsis Thaliana] (GB:Q8GY31;GB:Q8LC90;GB:Q9LZE1); similar to Os03g0108000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048698.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN62781.1); contains InterPro domain Rhodanese-like; (InterPro:IPR001763) 0.0294257017515882 0.31038603541055 0.762295441006519 1 0.0938322218071116 18.9280857001331 0.0294257017515882 0.0843967187232732 AT5G58820_at 0.938716994672006 1.08969876664959 1.31465410908862 1.09666539996960 1.21422513956701 0.899415766206102 1.04228714233927 0.853430383996652 1.44237793497098 0.988226053551275 1.03765056947811 0.879373964670324 1.24936066663269 1.24979016041681 1.17506053285151 1.33846745114558 1.09594541164747 1.62771723739869 1.36326986899190 0.202454997434009 0.196667559622576 0.201434999626882 0.199599073409776 0.196667559622576 0.203082003052844 0.199941262795454 0.196732963521695 0.202455571364056 0.201702324109224 0.202069142051372 0.201642582324642 0.204128108018964 0.198300754336142 0.204169591962261 0.199783856575004 0.201863927605801 0.219961837179849 0.200311796024084 5 5 + 23771300 23771918 23771658.727 23769182 23771999 + gene protein_coding_gene TRUE TRUE AT5G58820.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59090.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58830.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) -0.0287736258016718 -0.309969640227577 0.762603360079762 1 0.0937020623846609 2.29178439703687 -0.0287736258016718 0.0783703394290632 AT5G35900_at 0.929511771910448 0.955983494015823 1.00724689964149 0.966321378864988 0.840261769933224 0.870850105966678 0.77238644608331 0.857932685490627 0.875925881425019 0.875038597454129 0.84384348443555 0.949216406460178 0.986867947331489 1.19636270029032 0.566056336564278 1.23380673819834 1.02183419043057 1.29204434482927 1.17925044481782 0.201594264970302 0.198749606902476 0.2005507095936 0.202142407895847 0.200682417205452 0.200295466816098 0.202048417260507 0.203807839968373 0.208100351298424 0.210898649750453 0.200943851153112 0.205635649793790 0.204634185356205 0.204774180225217 0.209055455794358 0.198894724363258 0.202904675909749 0.200984981076662 0.203817272098883 5 5 + 14045986 14046496 14046210.182 14045929 14046549 + gene protein_coding_gene TRUE TRUE AT5G35900.1 LOB domain family protein / lateral organ boundaries domain family protein (LBD35) Identical to LOB domain-containing protein 35 (LBD35) [Arabidopsis Thaliana] (GB:Q9FFL3;GB:Q4PSE0); similar to LOB domain family protein / lateral organ boundaries domain family protein (LBD32) [Arabidopsis thaliana] (TAIR:AT4G22700.1); similar to Protein of unknown function DUF260 [Medicago truncatula] (GB:ABE79685.1); similar to Protein of unknown function DUF260 [Medicago truncatula] (GB:ABE82481.1); contains InterPro domain Lateral organ boundaries, LOB; (InterPro:IPR004883) -0.0247105665028741 -0.308512495821974 0.763681239359572 1 0.0932479282314624 1.89405798222157 -0.0247105665028741 0.0178418063412332 AT5G63460_at 4.58948853354705 4.71626277677162 5.46158910805768 5.87106434091494 5.95056273025057 6.31786211193878 3.84583346043626 4.53084046735974 4.43173737347954 4.72343557901912 4.61756538537234 4.89093668809084 5.30688003428234 5.06811263254817 4.82217024660502 5.16448194546614 4.96415670024014 4.80224115891879 4.3969420977997 0.288778191946587 0.297361087714258 0.297235259776132 0.301887311829758 0.288894458465602 0.303924311542231 0.299438663456799 0.288778191946587 0.307305313041814 0.302216938805442 0.301522765906284 0.288778191946587 0.288778191946587 0.288778191946587 0.30823966542095 0.288778191946587 0.322681330377869 0.288778191946587 0.292301452484564 5 5|0 -|/ 25431088 25432573 25431969.2 25430594 25432735 - gene protein_coding_gene TRUE TRUE AT5G63460.1|AT5G63460.2 SAP domain-containing protein similar to hypothetical protein Haso02002276 [Haemophilus somnus 2336] (GB:ZP_00204600.1); contains InterPro domain DNA-binding SAP; (InterPro:IPR003034) 0.0380112425324455 0.308159074141126 0.76394275185381 1 0.093138096987647 9.8964078323462 0.0380112425324455 0.153608325389321 AT5G01970_at 5.10702057929916 5.09644111937281 6.40463519514245 5.66747958870476 6.52984212671099 6.15552567805445 4.77810520928151 4.55691401774998 5.06447064095974 4.75659556907169 5.73596049019508 5.91252622342432 6.06294539725025 5.9476448503954 5.23631177453471 5.27763188335419 5.64298069586493 5.47900119032409 5.42644094828905 0.226285675272180 0.215313285830104 0.219972725489608 0.226646872390636 0.220683683143408 0.215796324330728 0.227013079633619 0.220471863689974 0.226872639368444 0.218901167803741 0.217439995993031 0.22295801125167 0.217854048771707 0.216286952203883 0.216619396237000 0.219956640027545 0.232335552760389 0.215543776465153 0.224480856437131 5 5|0 -|/ 373025 373704 373328.667 372902 374951 - gene protein_coding_gene TRUE TRUE AT5G01970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G30050.1); similar to Os05g0315200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055171.1); similar to Os11g0118800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065600.1); similar to expressed protein-like protein [Sorghum bicolor] (GB:AAO16693.1) -0.0371720335893413 -0.307758274813972 0.764239358572163 1 0.0930136918453349 10.9091842889269 -0.0371720335893413 0.148115854062223 AT5G28860_at 1.36791193687130 1.26453985762785 1.75930548812837 0.975768388058491 1.23347026724582 1.78184361907547 1.19096681246956 1.64006056943165 1.47153224201603 1.54207776050862 1.63342380990397 0.995811866832132 1.31070883886988 1.90960002237626 1.84152489746586 1.92158079994107 1.58491350163494 2.16744986823195 1.34119294306666 0.202334551470329 0.20608917366986 0.206860940770063 0.208662600883128 0.204018529796144 0.202600211205233 0.203781557321759 0.203443610811691 0.214027829900966 0.218472054304243 0.205068750109946 0.208645625686991 0.204399169271816 0.203738048817989 0.212881506827954 0.201489096172457 0.218961943198622 0.204315337304124 0.208040745052254 5 5|0 -|/ 10883496 10884263 10883847.111 10883456 10884287 - gene protein_coding_gene TRUE TRUE AT5G28860.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01031.1) 0.0423923009739631 0.307105529590151 0.764722499757638 1 0.0928114245527187 2.96284720862395 0.0423923009739631 0.183716473409386 AT5G51860_at 1.18907007407038 1.19214322531760 1.25839281062882 1.44554962873554 1.18085315314921 1.41459648912821 1.29178718471215 1.17972540111324 1.23910414137879 1.37064437461807 1.19249958760923 1.03229728521257 1.30272370226858 1.32688423800631 1.45007180281884 1.21482289353977 1.47032424592851 1.23950982733518 1.21579135490689 0.195129667731945 0.196435372820335 0.198112036740035 0.199241816014446 0.195208552139058 0.195966289384732 0.198502670871991 0.195903632987397 0.195992080894807 0.203360777286995 0.199313871600868 0.200973953515689 0.196236730525231 0.196242052846278 0.202299429137693 0.195129667731945 0.200744749012525 0.207606669402047 0.195129667731945 5 5|0 -|/ 21099132 21101283 21100254.222 21099070 21101653 - gene protein_coding_gene TRUE TRUE AT5G51860.1|AT5G51860.2 MADS-box protein (AGL72) similar to AGL71, transcription factor [Arabidopsis thaliana] (TAIR:AT5G51870.1); similar to MADS-box transcription factor FBP22 [Petunia x hybrida] (GB:AAK21253.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) -0.0264851806078472 -0.306799379228596 0.764949138697823 1 0.0927167023584702 2.54592557326079 -0.0264851806078472 0.0553317517514708 AT5G67090_at 1.51167884934048 1.45536089065953 1.96545952627715 1.95241969935254 1.43774514306974 1.69415020509594 1.51799569112856 1.58163267350921 1.67907595715169 2.03101759276628 2.07438328584722 1.75678370821817 1.83718587121101 1.92056473907610 1.85147784915176 1.82274882762482 1.68563771459799 1.69527673820197 1.58946033498247 0.229540203693282 0.228172837030583 0.248160811635265 0.247705072513396 0.235220756799174 0.246938515374312 0.239640380510249 0.239283991958388 0.241105205237026 0.241062806418043 0.233241339163066 0.236923053791963 0.255468117009418 0.228172837030583 0.232939458519933 0.229107984168576 0.236319641254064 0.233568725380783 0.242314652006575 5 5 - 26791338 26791878 26791640.273 26791244 26793617 - gene protein_coding_gene TRUE TRUE AT5G67090.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G14240.1); similar to Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide [Medicago truncatula] (GB:ABE93526.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.0258772156653366 0.306609782802989 0.765089505929048 1 0.0926580881508018 3.43806798649145 0.0258772156653366 0.0468000001537736 AT5G19900_at 6.99638681184375 6.81818657063878 8.09640607751664 8.00493075555951 7.7279447695311 8.02241494330145 6.80465457332223 7.03332061057273 6.90939578711462 7.18365371570777 8.06069547734848 7.72006491229335 8.04237720215881 8.0390107110719 7.70778421573364 8.1985869094273 7.88788181172392 7.96118215980198 7.17248302226062 0.160208018912172 0.154115773665691 0.160093567088456 0.154115773665691 0.155808688185490 0.161216087783236 0.160777615433165 0.157121999598021 0.176200734426304 0.16372395484526 0.157455272263336 0.157826012844275 0.157782920895185 0.160849411493561 0.155144521965500 0.158926229388420 0.172555123602556 0.156363416692364 0.159381100918953 5 5 - 6728576 6729079 6728847.364 6728162 6730047 - gene protein_coding_gene TRUE TRUE AT5G19900.1 PRLI-interacting factor, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to PRLI-interacting factor A [Medicago truncatula] (GB:ABE81556.1) -0.0279657202718115 -0.30653995301805 0.765141206463572 1 0.0926365090566026 14.9583850223554 -0.0279657202718115 0.073241980038343 AT5G24850_at 3.63402628315192 3.65445536206046 4.57375039930112 4.52285982669283 4.872107615603 5.10090569664179 4.45485345886484 4.63011576433366 3.58980765679913 4.11675117571527 4.6146040146276 4.96086169491794 4.68445178278671 4.72860077544699 4.09454080617323 5.09038263513258 4.58541168222144 4.90846008023856 3.69887492740482 0.199440655229554 0.201436871669674 0.203519988839364 0.200903382259479 0.207144382091182 0.208642940017484 0.204112394522045 0.202267920243130 0.205074030109402 0.204071639237465 0.202070141478268 0.204467912467046 0.201844163675292 0.204648531477172 0.204756034011010 0.204097057842778 0.206067717388175 0.207994820139635 0.199440655229554 5 5|0 -|/ 8535449 8536328 8535858.625 8535285 8538110 - gene protein_coding_gene TRUE TRUE AT5G24850.1 CRY3 (CRYPTOCHROME 3); DNA binding / DNA photolyase/ FMN binding Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis chryptochrome. Identical to Cryptochrome DASH, chloroplast/mitochondrial precursor (CRYD) [Arabidopsis Thaliana] (GB:Q84KJ5;GB:Q8VZD8); similar to PHR2 (PHOTOLYASE/BLUE-LIGHT RECEPTOR 2) [Arabidopsis thaliana] (TAIR:AT2G47590.1); similar to Cryptochrome DASH, chloroplast/mitochondrial precursor (GB:Q84KJ5); similar to Cryptochrome DASH, chloroplast/mitochondrial precursor (Cryptochrome-3) (GB:Q38JU2); similar to Deoxyribodipyrimidine photolyase, class 1 [Medicago truncatula] (GB:ABE80396.1); contains InterPro domain DNA photolyase, FAD- binding N-terminal; (InterPro:IPR006051); contains InterPro domain DNA photolyase, FAD-binding; (InterPro:IPR005101); contains InterPro domain DNA photolyase, N-terminal; (InterPro:IPR006050); contains InterPro domain Deoxyribodipyrimidine photolyase, class 1; (InterPro:IPR002081) -0.0260948748357234 -0.306057938750005 0.765498112634001 1 0.0924876865148177 8.68549701945597 -0.0260948748357234 0.0507710164145768 AT5G02850_at 4.90376548672169 4.72436290318619 5.49587114285329 5.54554588626769 6.05476413603698 6.2014119803191 4.53162004935160 4.33638390437345 4.55666449557702 4.25394706047777 5.39228816928078 5.24548041393589 5.44077660072527 4.67464079149925 5.35732505719197 5.11944273675161 5.16754293530008 5.20591951505067 4.93834512132954 0.250115482277727 0.238374071535794 0.247066628470207 0.248080824951741 0.240844567362183 0.236913159270979 0.243132546458996 0.246433038254846 0.243240396348396 0.236269845092317 0.241325214207762 0.236387146396969 0.236254856772390 0.254099577741981 0.236130346729217 0.239764422297550 0.252327801877749 0.24012161389998 0.249935021464044 5 5 + 652859 653262 653081.273 652108 653671 + gene protein_coding_gene TRUE TRUE AT5G02850.1 hydroxyproline-rich glycoprotein family protein similar to Os09g0540500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063809.1); similar to hypothetical protein LOC_Os11g05150 [Oryza sativa (japonica cultivar-group)] (GB:AAX92744.1) -0.0262006472584023 -0.305354189245895 0.766019304634094 1 0.092270815614317 10.1159219794363 -0.0262006472584023 0.0531352811371865 AT5G63190_at 10.2663617327510 10.2147697325824 10.6637183556460 10.7510512629559 11.2520585615874 11.2527497088137 9.3498975462365 9.52892125428426 10.310903121643 9.76782274071455 10.2892429606982 10.2446525561483 10.4176683268400 10.2455804072638 10.1828690243803 10.7125487524067 10.4487194836549 10.2099434516452 10.4043079789596 0.0765778732371039 0.0763162679290722 0.076911233803799 0.0784858006938522 0.0796241864871195 0.0804813238514296 0.0769277366953247 0.0763131339051085 0.0822690149023125 0.08036733779821 0.0745437222096348 0.076381224538551 0.0767469445077466 0.0762934698516803 0.0742021087191336 0.0735535112367851 0.0784971163609944 0.0763749327654608 0.0765918520684421 5 5 + 25365216 25365740 25365461.727 25362768 25366022 + gene protein_coding_gene TRUE TRUE AT5G63190.1|AT5G63190.2 MA3 domain-containing protein similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24800.2); similar to MA3 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G48390.1); similar to H0525D09.11 [Oryza sativa (indica cultivar-group)] (GB:CAH66971.1); similar to Os08g0120500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060879.1); similar to OSJNBb0011N17.20 [Oryza sativa (japonica cultivar-group)] (GB:CAD41103.2); contains InterPro domain Initiation factor eIF-4 gamma, MA3; (InterPro:IPR003891) 0.0250734060601496 0.304635002260233 0.76655205508107 1 0.0920496935795742 20.6623982197665 0.0250734060601496 0.0356083833485957 AT5G13050_at 5.36448250057446 5.32904443605069 6.44677328185748 6.30471871023744 7.17726518365663 6.54621921384304 5.62926727887594 5.59776333819263 5.31516478385748 5.42977491823395 5.95907962413815 6.16901104732194 6.71746899729362 6.22598169082661 6.12372085217009 6.40877435337787 6.34960001964638 6.72335789488924 5.33040028629848 0.207507069940949 0.203775802067681 0.219114110640276 0.220080431316392 0.204014097953538 0.220479460973805 0.206183637491949 0.212395489273792 0.214190307202354 0.221977309725178 0.204739212745686 0.207027491372432 0.211991851043026 0.209563362862957 0.216294109369720 0.203775802067681 0.211428373693788 0.203807846386473 0.207595370444066 5 5|0 -|/ 4137025 4138345 4137724 4136559 4138795 - gene protein_coding_gene TRUE TRUE AT5G13050.1|AT5G13050.2 5-FCL; 5-formyltetrahydrofolate cyclo-ligase 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate similar to 5-formyltetrahydrofolate cycloligase [Lycopersicon esculentum] (GB:AAM90961.1); contains InterPro domain 5-formyltetrahydrofolate cyclo-ligase; (InterPro:IPR002698) 0.0320208892576277 0.304514084140403 0.766641639756233 1 0.0920125662077702 11.8959772292883 0.0320208892576277 0.112238573893761 AT5G66730_at 7.02996441489273 7.22120346138383 8.17602408828756 8.18995055610018 8.76063056193665 8.50798041811876 7.63058866297935 7.69670808742653 7.62577159973717 7.79010602329727 8.73526525914925 8.46796520867052 8.74369303177671 8.78750608738803 8.21111203030421 8.6206393160436 8.37318023720977 8.46047984244636 7.96670311860832 0.123494295650171 0.125111613778671 0.118165066336237 0.118458249717006 0.113257017914690 0.119162878251106 0.120750934923867 0.117222530713095 0.134459065467946 0.12101010280689 0.115070280558443 0.116077316454942 0.118904209896601 0.115248164302622 0.113328745703968 0.113484342750006 0.119925367334861 0.123631758916141 0.115650585815926 5 5 - 26659213 26659695 26659465.909 26658878 26661628 - gene protein_coding_gene TRUE TRUE AT5G66730.1 zinc finger (C2H2 type) family protein similar to ATIDD2 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 2), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G50700.1); similar to BAC19.12 [Lycopersicon esculentum] (GB:AAG01127.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.0262445816358965 -0.303381725508244 0.76748074445657 1 0.0916655825900114 16.0737181349763 -0.0262445816358965 0.0560681602027779 AT5G06430_at 2.93140019228004 3.93797393893591 4.15328435051864 4.13293858061502 4.85667729472332 4.49742585538946 3.97612313900025 3.75991210296922 3.04223591505017 3.26238261382727 3.66211998277356 3.6804004681089 4.01574290214207 3.47684885216015 3.9267958767379 4.03910713640358 4.02918612836889 3.67710707634009 3.09014962873318 0.229107535572330 0.228400080788225 0.237839041615988 0.237461739399959 0.229658683626216 0.231398470896418 0.23382840748445 0.225126502571201 0.239203281335976 0.245589453795409 0.226669368790474 0.228451795221084 0.242240735755176 0.225376645963416 0.227260713573449 0.226308809603948 0.236484024403329 0.234254729333759 0.222057472428815 5 5|0 -|/ 1963627 1964133 1963959.667 1963073 1964315 - gene protein_coding_gene TRUE TRUE AT5G06430.1 thioredoxin-related similar to HCF164 (High chlorophyll fluorescence 164), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT4G37200.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94564.2); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.0426100390590415 0.303115024434491 0.767678421857727 1 0.0915840431753871 7.50321840117878 0.0426100390590415 0.188733821503182 AT5G17680_at 1.64329111475223 1.7797819165113 1.63082631767024 1.83800320709939 1.99198150865934 1.80675442960567 1.34156600762903 1.58626394121506 1.25886339737382 1.94715703580067 1.66580386191238 1.68141134190498 1.73755854022658 1.53491386820106 1.77692615940475 1.73661865408770 1.51881587458412 1.87861947045888 1.64912586013096 0.211254771467246 0.214740628695607 0.222140617365012 0.209861884325908 0.208990109208140 0.208990109208140 0.210255774677519 0.208990109208140 0.208990109208140 0.208990109208140 0.208990109208140 0.21297464087885 0.212277830847206 0.208990109208140 0.221861129104197 0.210513218072104 0.222910283965967 0.211684416367322 0.208990109208140 5 5 + 5826556 5827105 5826811.818 5823001 5827155 + gene protein_coding_gene TRUE TRUE AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G11250.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G18360.1); similar to TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa] (GB:ABF81437.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) 0.0271004979627401 0.301896658804857 0.768581688259558 1 0.091212443494584 3.3571663399508 0.0271004979627401 0.0682937273675192 AT5G10720_at 1.88540019681348 1.54154049780793 1.94985954730321 1.80943539793233 1.65964879348943 2.08736535600524 2.2294045229254 1.5268898284238 1.62144631353084 1.74571750031890 1.39475100434527 2.04113906696565 2.17414221609113 2.0570063321346 1.82905057567667 1.91741015918821 2.49661199142730 2.04433538281649 1.75724854037884 0.190502146094618 0.18906228723431 0.189160257612206 0.187755753615059 0.18611539557661 0.188221290211484 0.189925749561855 0.18611539557661 0.196364874527645 0.191621846741260 0.186995252023758 0.196890705559194 0.195071753200459 0.192907139957385 0.191670797027620 0.191523025290386 0.193500689496377 0.18611539557661 0.191888914626813 5 5|0 +|/ 3389781 3390285 3390043.333 3385902 3390687 + gene protein_coding_gene TRUE TRUE AT5G10720.1 AHK5 (CYTOKININ INDEPENDENT 2) member of Histidine Kinase similar to calmodulin-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G10680.1); similar to Os06g0654300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058244.1); similar to putative histidine kinase 1 [Oryza sativa (japonica cultivar-group)] (GB:BAD37425.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase A, N-terminal; (InterPro:IPR003661); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase related protein, C-terminal; (InterPro:IPR004358); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.0375667364952457 0.301591832114565 0.768807735740242 1 0.0911197015956688 3.6874146638327 0.0375667364952457 0.156174215487540 AT5G52490_at 1.47226210847183 1.24337753028912 1.64721713823634 1.55102957186785 1.20593538044081 1.45920291288995 0.96637147655096 1.16645436724934 1.29476065999972 1.82143002784026 1.40275168160017 1.45791922793079 1.26182040642129 1.17840708037146 1.47873378421995 1.51079292161009 1.79583284861458 1.56178898363111 1.59175691188393 0.184489047366412 0.193362240944115 0.186436539272237 0.187693932793260 0.18618887211204 0.185088317815115 0.190086317955773 0.184292182660819 0.184614302249934 0.197153935074450 0.194161290420166 0.189545810973616 0.192034885198357 0.190395378264966 0.187657487683014 0.191325399461860 0.188657929422892 0.193746357155725 0.18843214821473 5 5 + 21316619 21317436 21316977.182 21316083 21317465 + gene protein_coding_gene TRUE TRUE AT5G52490.1 fibrillarin, putative Identical to Putative rRNA 2'-O-methyltransferase fibrillarin-3 (EC 2.1.1.-) (Fibrillarin-like protein 3) (FIB3) [Arabidopsis Thaliana] (GB:Q9FHB3); similar to FIB2 (FIBRILLARIN 2) [Arabidopsis thaliana] (TAIR:AT4G25630.1); similar to Fibrillarin [Medicago truncatula] (GB:ABE89444.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692); contains InterPro domain Histidinol dehydrogenase; (InterPro:IPR001692) -0.0272568767007362 -0.301511260741093 0.768867488070048 1 0.0910952035527632 2.85164217743681 -0.0272568767007362 0.070469126445114 AT5G15725_at 0.92563586918281 1.01753135855325 1.24341259076765 1.52836218049594 0.925336824062705 1.19450588798809 1.07681336835815 1.08009823839079 1.36801593526306 1.31111602858343 0.999671038851299 1.14416640130301 1.42163674830315 1.30312209128983 1.58119094973103 1.10922840731668 0.894882958920704 1.41417151284546 1.30433289238679 0.185993607485924 0.179154625007712 0.179084661867556 0.182261839414294 0.184515389420266 0.179987433486233 0.191983282441472 0.177138068809320 0.187976283693957 0.181716132883121 0.179724529705741 0.177312277884788 0.179594719931244 0.179285894290365 0.18323514653384 0.179419946684015 0.180117165255403 0.189032215841882 0.180276778936521 5 5|0 +|/ 5127504 5128200 5127927.3 5127407 5128341 + gene protein_coding_gene TRUE TRUE AT5G15725.1 unknown protein -0.0269977442187933 -0.299416045454117 0.770421867318492 1 0.0904604017435132 2.40462723088221 -0.0269977442187933 0.0696754751860686 AT5G04120_at 1.38279442473506 1.04972639028819 1.6127271785482 1.52770913489102 1.23376911136534 1.09120071128187 1.29872584065055 1.70998104468436 1.26591437494495 1.94856928616899 1.7249935640467 1.61871063201828 1.6141356060685 1.26725376200204 1.64799889054239 1.84432171951074 1.86684738926086 1.74751457561007 1.36375390308643 0.199932202178031 0.191924558715420 0.198553231962805 0.19082773223886 0.186111889336427 0.196540468165056 0.19399655856266 0.198251942941048 0.196735771472437 0.190200614051785 0.189181894133234 0.1909689966161 0.194432083630113 0.199486116771112 0.191477252435969 0.197096756055411 0.189142669049596 0.188277298679857 0.195248908679736 5 0|5 /|+ 1120896 1121494 1121166 1120004 1121776 + gene protein_coding_gene TRUE TRUE AT5G04120.1 phosphoglycerate/bisphosphoglycerate mutase family protein similar to phosphoglycerate/bisphosphoglycerate mutase family protein [Arabidopsis thaliana] (TAIR:AT3G50520.1); similar to phosphoglycerate mutase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91368.2); contains InterPro domain Phosphoglycerate/bisphosphoglycerate mutase; (InterPro:IPR001345); contains InterPro domain Phosphoglycerate mutase; (InterPro:IPR013078) -0.0296048732021150 -0.299394849947912 0.770437597067842 1 0.0904540022034451 2.95960483228019 -0.0296048732021150 0.0959820161506195 AT5G15560_at 0.897501655017902 1.49713409979978 1.85961551971874 1.60486487863702 1.09327011463084 1.36797343548656 1.26421046852133 1.50211979534547 1.66079460361925 1.45180395327965 1.56800837665616 1.80477922911218 1.65807108790527 1.54258799263277 1.66733592363616 1.54681201971465 1.43023943383151 1.76703604608611 1.89309627491121 0.189468835474936 0.19012539147577 0.193929498887295 0.192156522394607 0.187767812655781 0.191109801094926 0.189918130673063 0.20502649805458 0.189637551554014 0.196272513935395 0.200794829206691 0.19363022059689 0.193236276847358 0.190527472537586 0.190557233183839 0.188580234541186 0.195119671059112 0.204325907925373 0.196401295726333 5 5|0 +|/ 5064370 5064802 5064627.7 5064054 5064892 + gene protein_coding_gene TRUE TRUE AT5G15560.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02125.1) -0.0335369836250961 -0.298822605476938 0.770862315845537 1 0.0902813930991967 3.03167309971148 -0.0335369836250961 0.129099210707407 AT5G35170_at 10.6970856555135 10.5296143825202 11.4999260890091 11.2519574588714 11.8185862209719 11.3491666380038 11.5952433856345 11.1708535459450 11.0940513541526 11.6498573549866 12.2074002565654 11.8040681625066 11.9599307171737 12.0546435406578 11.7228440885653 12.1582992376007 11.9506966932427 11.8527762982939 11.5338701291441 0.0824464101937567 0.078376095617881 0.0816773722640704 0.0806413832080653 0.0802399454330534 0.0852145110410085 0.081024342223873 0.0794901320880575 0.0901333418550481 0.0800627007327984 0.0789038060261573 0.078376095617881 0.0802653018837543 0.0824648284309995 0.0793735279564787 0.079024921485794 0.0822848045821782 0.0862724415955475 0.0804410744692174 5 5|0 +|/ 13439379 13440451 13439949.778 13436396 13440976 + gene protein_coding_gene TRUE TRUE AT5G35170.1|AT5G35170.2 adenylate kinase family protein|nucleotide kinase similar to adenylate kinase, chloroplast, putative / ATP-AMP transphosphorylase, putative [Arabidopsis thaliana] (TAIR:AT5G47840.1); similar to Os08g0109300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060810.1); similar to Adenylate kinase, chloroplast (ATP-AMP transphosphorylase) (GB:P43188); similar to Os08g0288200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061454.1); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769); contains InterPro domain Adenylate kinase; (InterPro:IPR000850) -0.0325141466224537 -0.298779158208492 0.770894565548604 1 0.0902683011176 22.9339334989354 -0.0325141466224537 0.121137838175576 AT5G07280_at 1.67883997423591 1.77590214913619 1.84984278734714 1.85445308453787 1.36140897050929 1.65912872506772 1.43300582037563 1.81087299304863 1.36163354803544 1.58313839650766 1.58097458457438 2.08520776034374 1.97555309811285 1.79404810519363 1.47990172292830 1.81578167124591 1.73446897898909 2.17399300399148 1.65035136257238 0.248731893315261 0.247424952348065 0.262465200946523 0.253264577613704 0.247066192029843 0.248345368882811 0.252850943720385 0.247039024690751 0.261924745593795 0.258730944269721 0.247153572953634 0.256701780345102 0.257978543902099 0.25008378402303 0.246881589740375 0.246881589740375 0.259529468273355 0.252839759801907 0.249046581454702 5 5 + 2288118 2288614 2288389.818 2285041 2288687 + gene protein_coding_gene TRUE TRUE AT5G07280.1 EMS1 (EXCESS MICROSPOROCYTES1); kinase Leucine-rich repeat receptor protein kinase involved in tapetal cell fate specification. Identical to Leucine-rich repeat receptor protein kinase EXS precursor (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) (EXS) [Arabidopsis Thaliana] (GB:Q9LYN8;GB:Q8GSM5); similar to EDA23 (embryo sac development arrest 23), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G44700.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G20140.1); similar to Leucine Rich Repeat family protein [Solanum demissum] (GB:AAT40539.2); similar to putative extra sporogenous cells [Oryza sativa (japonica cultivar-group)] (GB:BAD15407.1); similar to Os01g0917500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045202.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0283630437822361 0.298608941345267 0.771020917184592 1 0.0902170276168901 3.35878125538776 0.0283630437822361 0.0849314090647797 AT5G13760_at 4.1864662657706 4.76376764092823 4.43007173639004 4.87031007739944 5.47662720608752 5.48428292431812 2.96513417999506 3.77122728603511 4.61407132329641 4.07207862316267 4.99628195909334 5.46531919974298 5.43630603095591 5.46548643504774 4.80381351730109 5.84631987571625 4.76339004135512 4.91988035109983 4.86143636802749 0.231786028780644 0.22810188216319 0.248157196880539 0.226901509809631 0.225099599972287 0.232872110543642 0.256042464227697 0.229616862159022 0.239039742653456 0.230142972946254 0.226649303936579 0.225096649617609 0.225085684932372 0.225651170193509 0.228719340118766 0.226499623608287 0.242256276865070 0.225770774023649 0.237618607975585 5 5|0 +|/ 4443501 4444427 4444085.8 4442017 4444938 + gene protein_coding_gene TRUE TRUE AT5G13760.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04440.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC20799.1); similar to Os07g0656100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060501.1); contains InterPro domain Protein of unknown function DUF580; (InterPro:IPR007603) 0.0417544372361756 0.298096328082066 0.771401471072603 1 0.0900627892514707 9.35746680517446 0.0417544372361756 0.187740892985588 AT5G11010_at 5.44497122564624 5.72297491259371 6.46624684392341 6.5887653552706 6.37877436826325 6.55318177224996 5.1959633676041 5.82013606527215 4.68785295594826 4.45639903367044 5.21534625564033 5.22399254414369 5.62044760764101 5.27999947238416 6.0223340354436 5.91123456300017 5.63676148781585 5.50692917334936 4.6319058268722 0.225422802123254 0.224114541323942 0.228723121697231 0.221412955948586 0.223023445174425 0.223729011800351 0.219761471186356 0.217218520001271 0.222641926528501 0.229722440866228 0.219050413856670 0.219462795947856 0.217218520001271 0.227444253751015 0.228988520871024 0.2197055858438 0.224666694895966 0.22278308555147 0.223344571352318 5 5|0 +|/ 3485008 3485775 3485389.3 3483705 3486268 + gene protein_coding_gene TRUE TRUE AT5G11010.1|AT5G11010.2|AT5G11010.3 pre-mRNA cleavage complex-related similar to pre-mRNA cleavage complex family protein [Arabidopsis thaliana] (TAIR:AT3G04680.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD52595.1); similar to Os01g0354700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042993.1); similar to Os01g0184000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042230.1); contains InterPro domain NUC156; (InterPro:IPR012581); contains InterPro domain Pre-mRNA cleavage complex II Clp1; (InterPro:IPR010655) -0.0327443888765615 -0.297736540508549 0.771668607914606 1 0.0899546895096646 11.0934683628150 -0.0327443888765615 0.123864875643439 AT5G39260_at 1.07010308124503 0.98957513022535 1.13166118539535 1.46773141651142 1.43458954702496 1.00983528733630 1.19848157451804 1.36873666565145 1.25937818909306 1.24253104385256 1.27297679604048 1.38888854154889 1.13291048522218 1.22390394701790 1.5395951764997 1.16901439864669 1.13197783395619 1.44072365084594 1.35878069108273 0.179745209221534 0.184773710732915 0.180720579784558 0.183744946538997 0.179745209221534 0.182007120403605 0.182297586485936 0.185052961582951 0.179745209221534 0.180536766940115 0.180595786778038 0.184297913135418 0.184035501325465 0.184307069907382 0.183166269200269 0.184380178150408 0.183844235066272 0.182461622831892 0.185298414085881 5 5 - 15743936 15744238 15744085.182 15743606 15744686 - gene protein_coding_gene TRUE TRUE AT5G39260.1 ATEXPA21 (ARABIDOPSIS THALIANA EXPANSIN A21) expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) Identical to Expansin-A21 precursor (AtEXPA21) (Alpha-expansin-21) (At-EXP21) (AtEx21) (Ath-ExpAlpha-1.20) (EXPA21) [Arabidopsis Thaliana] (GB:Q9FL81;GB:Q84WR9); similar to ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25) [Arabidopsis thaliana] (TAIR:AT5G39300.1); similar to Expansin-A25 precursor (AtEXPA25) (Alpha-expansin-25) (At-EXP25) (AtEx25) (Ath-ExpAlpha-1.18) (GB:Q9FL77); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Barwin-related endoglucanase; (InterPro:IPR009009); contains InterPro domain Expansin 45, endoglucanase-like; (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A; (InterPro:IPR005132); contains InterPro domain Pollen allergen/expansin, C-terminal; (InterPro:IPR007117) -0.0297167913514205 -0.296902663545445 0.772287868340441 1 0.0897046405606384 2.496036983521 -0.0297167913514205 0.0992360883887529 AT5G38700_at 1.02705528608208 1.27118472212068 1.43449686682916 1.48432711262296 1.22652085521364 1.03786058117071 1.03145357843722 0.942254083980019 1.56757762782476 1.35667667635831 0.813054198524434 1.38948851025668 1.77023091071891 1.6295048820242 0.877254329374435 1.00408526986824 1.58747414205344 0.67923243042092 1.08487281244207 0.188132531667982 0.187380257377784 0.184659003779462 0.192770917532427 0.184659003779462 0.193552634192 0.194867348154241 0.193555422611079 0.195304441271689 0.192670512594057 0.189309320948107 0.184659003779462 0.187198054687863 0.191643208513852 0.195971622148455 0.190348139065384 0.192742738088264 0.188951467034005 0.195791769226272 5 5 + 15507022 15507282 15507141.273 15506824 15507629 + gene protein_coding_gene TRUE TRUE AT5G38700.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02170.1); similar to At5g38700 [Medicago truncatula] (GB:ABE84418.1) -0.0256547565956427 -0.296415236685833 0.772649922307115 1 0.0895587982497135 2.45947728065549 -0.0256547565956427 0.0562444919322279 AT5G50920_at 12.6548632984467 12.8893920075099 13.2704670866626 13.4024748244139 13.3002370823836 13.1180901496090 13.0279475556529 13.0832671034664 12.9172244245347 13.3196871025158 13.5301828902671 13.4372524096964 13.6176504406132 13.556352479875 13.3902892756247 13.7580640885311 13.4113753226967 13.6202817675397 13.1026714008985 0.0728412259720539 0.071924124148151 0.0744290006462396 0.0729582432564273 0.0718491489663666 0.0776016154993809 0.0729585359888535 0.0731690396406971 0.0828152051917178 0.0715665304358639 0.0739826262753558 0.0722500356418692 0.0715665304358639 0.0737142310956364 0.0733494704676716 0.0715665304358639 0.0807322032598977 0.0720866505159248 0.0716264463081748 5 5 - 20732939 20733460 20733171.545 20732695 20737600 - gene protein_coding_gene TRUE TRUE AT5G50920.1 CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. similar to ATCLPC (CASEINOLYTIC PROTEASE C), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G48870.1); similar to APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G15450.1); similar to ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G51070.1); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor (GB:P46523); similar to ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor (GB:P35100); similar to ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor (GB:P31542); contains InterPro domain ATPase AAA-2; (InterPro:IPR013093); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain Clp, N terminal; (InterPro:IPR004176); contains InterPro domain UvrB/UvrC protein; (InterPro:IPR001943); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.025545845537124 -0.294482025167738 0.774086443673213 1 0.0889826832507882 26.4200300853540 -0.025545845537124 0.0570470481644245 AT5G58950_at 9.95049512759722 9.86169545430718 10.5236165817851 10.4770443071816 10.6698889106346 10.5359031912822 9.94602181418584 9.99309564451333 10.1764529893297 10.1181529320120 10.9103903517805 10.7577353955520 10.8174688924013 10.6265707809727 10.4450036331206 10.8468122855821 10.5979533300378 10.6209099569645 9.97563304049092 0.0855419745437703 0.0880787901358297 0.0882202514866819 0.0929073208232203 0.0888396447634041 0.0959684526963271 0.0855419745437703 0.091927179695096 0.0913749608032666 0.0920270839476746 0.090775282370547 0.0877202433042481 0.0888136768516563 0.0995403204588558 0.0909949251063046 0.0882803076905684 0.0956771299796604 0.0877081617891764 0.0901092773855351 5 5|0 -|/ 23818366 23819019 23818634 23818154 23820899 - gene protein_coding_gene TRUE TRUE AT5G58950.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G46930.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06446.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0239649176692183 -0.294160658742517 0.774325329292216 1 0.088887272106306 20.6411877450587 -0.0239649176692183 0.0300848837383736 AT5G25270_at 6.33305623121614 6.22808557069818 7.49156985440526 7.1160590440699 7.56751328646033 6.6852288796264 6.31709959283055 5.80705431756826 6.47118224818681 6.29029870510284 8.0273189328451 7.62476076830314 7.63136768729323 7.7140086729361 7.27402214095642 7.9969438402107 7.61495138471948 6.85260420926309 6.6655772927498 0.224603352609526 0.225019321116066 0.224810624669134 0.229637252877046 0.220062249514660 0.225614440444843 0.224824890490836 0.232073799104798 0.229953909037416 0.223016215958094 0.222907034061456 0.219579740410960 0.223530119661546 0.229402587466695 0.223110999976444 0.2211698921911 0.234931953229355 0.219579740410960 0.232840783725910 5 5 - 8758316 8758969 8758637.455 8757547 8762005 - gene protein_coding_gene TRUE TRUE AT5G25270.1 similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT5G11080.1); similar to AT5g42220/K5J14_2 [Medicago truncatula] (GB:ABE80944.1) 0.0413442558900716 0.294010776986562 0.774436751295317 1 0.0888428084062461 13.7270499903989 0.0413442558900716 0.188827870281458 AT5G59590_at 2.32697824006815 2.1049327799115 2.39896234545524 2.47039238593134 2.04925983206512 2.50896213155129 2.09252808043888 2.08772067787831 2.34061062992077 1.79356576955507 1.97831791171624 2.31595259791059 2.01980018837137 2.49664029097199 2.18991860807375 2.14287244037026 2.45005652859595 2.43410881122691 2.14671448880190 0.196461517832256 0.201229887596357 0.198359992224932 0.204752028763120 0.197977642861323 0.202232065653226 0.195582455917979 0.196792375896876 0.197362958184739 0.197067579567348 0.199554758759422 0.198137483060628 0.195582455917979 0.199217785059093 0.195582455917979 0.200437573785351 0.199238541552805 0.201997437687826 0.202113356939299 5 5 - 24026378 24026882 24026617.182 24026209 24027875 - gene protein_coding_gene TRUE TRUE AT5G59590.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G59580.1); similar to glucuronosyl transferase homolog, ripening-related - tomato (fragment) (GB:S39507); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.0283548219518572 -0.293966272624923 0.774469836836284 1 0.088829610095764 4.42851141828609 -0.0283548219518572 0.089212281242503 AT5G18710_at 1.00229823679602 0.819651317642979 1.22300148277445 1.24931194663678 1.25535851923524 1.26277403958122 1.35233167976307 0.725536657980545 1.82314310101858 1.24268606641128 0.84199350695942 1.40128729690308 1.42819524343378 1.17305788854009 1.61266410645787 1.00179634547702 1.62414727013515 1.52961647628586 1.06113654621405 0.179826150879241 0.173702328463892 0.182444731789186 0.185768856000938 0.176270944001814 0.181782361730351 0.177834128409283 0.177893262337279 0.182450667442028 0.17908071852819 0.183357081841119 0.17760732591625 0.185438952615482 0.185655450244913 0.183100888237482 0.174379071547489 0.17723761453833 0.190665817673703 0.182097285000476 5 5 + 6242908 6243371 6243149.727 6241632 6243481 + gene protein_coding_gene TRUE TRUE AT5G18710.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18720.1); similar to Os06g0535300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057790.1); similar to heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] (GB:ABF69988.1); similar to Os01g0375100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043077.1); contains domain DNAJ/HSP40 (PTHR11821); contains domain DNAJ-RELATED (PTHR11821:SF33) 0.0309207693757481 0.293103462458259 0.775111362064053 1 0.0885741212479312 2.46240798737896 0.0309207693757481 0.113080216260638 AT5G26710_at 9.25103587193274 9.337873911453 9.85275843505212 9.85738274551995 9.82389371611704 9.81601143129319 9.25841106707608 9.10164352257762 8.71219258142488 9.02800185936317 9.7643386759591 9.95699461170638 9.351636579405 9.61553966227117 9.81376869953728 9.72014102642836 9.71633775939223 9.51083437564209 8.8915097066534 0.106952851166430 0.106285131455264 0.112317703122996 0.108897118450016 0.111160840981851 0.113192894741854 0.112630367771733 0.109000425484523 0.132138379694905 0.112021817369850 0.107109245027641 0.105780228835056 0.112393953785254 0.109375422221453 0.110060224078683 0.106474332350739 0.112918692546072 0.111650583323310 0.112605072422258 5 5 + 9307578 9308200 9307818.091 9305516 9308443 + gene protein_coding_gene TRUE TRUE AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative similar to OVA9 (OVULE ABORTION 9), glutamine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G25350.1); similar to putative tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:AAN08648.1); similar to Os10g0369000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064451.1); similar to Glutamyl-tRNA synthetase archae/euk cytosolic; Glutathione S-transferase, C-terminal-like [Medicago truncatula] (GB:ABE81799.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I; (InterPro:IPR001412); contains InterPro domain Ribosomal protein L25-like; (InterPro:IPR011035); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Glutamyl-tRNA synthetase archae/euk cytosolic; (InterPro:IPR004526); contains InterPro domain Glutamyl-tRNA synthetase, class Ic; (InterPro:IPR000924) -0.0238936245149766 -0.292792045673409 0.775342953071104 1 0.0884820881150278 18.8165931574310 -0.0238936245149766 0.0310537530414826 AT5G61540_at 4.0086986179447 3.92293227545796 4.47366267250755 3.95477704184653 4.72690348316679 4.2612834064973 3.89220650843124 3.45364364053442 4.06130507390665 3.43591785624848 4.8408211630081 5.15997175792397 4.65447077716438 4.89822799056279 4.47370609947669 4.88619446940227 4.66368921616028 4.24209718168711 3.81647217828469 0.204967961452098 0.201760415542523 0.199583980110969 0.199577979376574 0.199636687813245 0.201590698893757 0.200771660281971 0.202952394833474 0.198716754111357 0.202270534376477 0.20733856867091 0.199141586293451 0.205480252458980 0.201763599053773 0.206351437430732 0.204368447824015 0.211405455994821 0.202290901229442 0.200876839711273 5 5|0 +|/ 24763307 24764342 24763818.5 24762173 24764750 + gene protein_coding_gene TRUE TRUE AT5G61540.1|AT5G61540.2|AT5G61540.3 L-asparaginase, putative / L-asparagine amidohydrolase, putative|asparaginase Identical to Probable L-asparaginase 3 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 3) [Contains: L-asparaginase 3 subunit alpha; L- asparaginase 3 subunit beta] [Arabidopsis Thaliana] (GB:Q56W64;GB:Q5M760;GB:Q9FKG7); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to OSIGBa0134H18.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67499.1); similar to ENSANGP00000016583 [Anopheles gambiae str. PEST] (GB:XP_320240.3); similar to Os04g0549300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053482.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246)|Identical to Probable L-asparaginase 3 precursor (EC 3.5.1.1) (L-asparagine amidohydrolase 3) [Contains: L-asparaginase 3 subunit alpha; L- asparaginase 3 subunit beta] [Arabidopsis Thaliana] (GB:Q56W64;GB:Q5M760;GB:Q9FKG7); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to hypothetical protein FG02189.1 [Gibberella zeae PH-1] (GB:XP_382365.1); similar to OSIGBa0134H18.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67499.1); similar to Os04g0549300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053482.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) -0.0346675859473833 -0.292383182574913 0.775647046688414 1 0.0883614026236724 8.33607797316655 -0.0346675859473833 0.143305313030420 AT5G54680_at 9.29586150987987 9.60126727608705 10.17729287931 10.3811666454753 10.4343178370483 10.2753084451560 9.5346187802096 10.0423554642235 9.57337300851654 9.47981923142565 10.2504682924982 10.2110814617221 10.2015839394599 10.2531749352283 10.1716992308348 10.3837276518315 10.0174443433000 10.1264753352918 9.41590426087764 0.122689833724729 0.123905173334291 0.125545139267840 0.118640442710933 0.124145189635320 0.124601576535093 0.121383883387513 0.119966469746759 0.123498185258719 0.129179499324752 0.122586969594860 0.116891840062016 0.117128916987085 0.129067527874061 0.123419941499831 0.121479801947853 0.126435506721486 0.127955648296056 0.128168819922321 5 0|5 /|+ 22235572 22236181 22235987.7 22234281 22236500 + gene protein_coding_gene TRUE TRUE AT5G54680.1 ILR3 (IAA-LEUCINE RESISTANT3); DNA binding / transcription factor similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G51070.1); similar to Prefoldin; Helix-loop-helix DNA-binding [Medicago truncatula] (GB:ABE93168.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) 0.0306796358534451 0.292167450823265 0.775807513980446 1 0.0882977911606426 19.8136014708624 0.0306796358534451 0.111873880325097 AT5G48600_at 2.66917533575437 2.51622195165596 3.43720691971791 2.99811044428293 2.5901408449511 2.87986876525669 2.9258289786751 2.63797441745678 3.15562124066081 3.19869041917605 4.06584029843479 3.94020993592794 3.15950931492419 3.53731350950288 4.48082819667048 3.42579693056525 3.02361555002449 3.75798230681814 2.90986856541358 0.211305429436017 0.199455838434889 0.202355476770166 0.206359738605633 0.211903340228243 0.205712485226971 0.206663171361073 0.200281275877052 0.202663536583455 0.201131451463260 0.199455838434889 0.207102802421227 0.208324447138249 0.204560426134755 0.201781774081813 0.199966778999364 0.205534170441129 0.203270491414454 0.204160875388515 5 0|5 /|+ 19725213 19726259 19725773.429 19719103 19726356 + gene protein_coding_gene TRUE TRUE AT5G48600.1 ATSMC3 (Arabidopsis thaliana structural maintenance of chromosome 3); ATP binding member of SMC subfamily similar to TTN8 (TITAN8), ATP binding [Arabidopsis thaliana] (TAIR:AT3G54670.1); similar to structural maintenance of chromosome protein [Dictyostelium discoideum AX4] (GB:XP_637730.1); similar to SMC4 protein [Oryza sativa] (GB:CAD32690.1); similar to putative SMC protein [Oryza sativa (japonica cultivar-group)] (GB:AAT07581.1); contains InterPro domain SMC protein, N-terminal; (InterPro:IPR003395); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain SMCs flexible hinge; (InterPro:IPR010935) -0.0301075994028751 -0.292001612084055 0.775930876924921 1 0.0882489227087887 6.21278949743985 -0.0301075994028751 0.107098744104106 AT5G67580_at 6.52829286099257 6.31236511240034 7.10365042099715 7.45871487033695 7.70955505583357 7.45089437711207 6.84135151111234 6.24831591165265 6.27108601926019 6.2227779603041 7.54795842034247 7.57240507334265 7.31921605096553 7.4112786545158 7.35389955973418 7.70117999762163 6.82745873867963 7.32185618215573 6.47306884805126 0.197789650667818 0.193065749105973 0.196895723034168 0.190177791511971 0.196737782212826 0.197552878340158 0.201960490228389 0.195298654272079 0.218616460735627 0.194025796225482 0.194023830734615 0.195166982217580 0.191526581907977 0.20403446871588 0.197204650752873 0.193220813400663 0.210089405848785 0.198562512695749 0.198113620933166 5 5 - 26973077 26973889 26973498 26972361 26974969 - gene protein_coding_gene TRUE TRUE AT5G67580.1|AT5G67580.2 ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor similar to ATTRB3/TRB3 (TELOMERE REPEAT BINDING FACTOR 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G49850.1); similar to MYBR6 [Malus x domestica] (GB:AAZ20445.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0331655014860004 -0.290999998138327 0.776676088173821 1 0.0879543523800466 13.8087512786588 -0.0331655014860004 0.133071286449698 AT5G17770_at 10.0283912991708 10.1098485107121 10.6312153971569 10.6794522628665 10.5542049123594 10.4084718175761 10.2052385996531 10.3662200941963 9.94086530826386 9.93188311820328 10.9124603804131 11.0101069920437 10.6724590867056 10.7646361615226 10.9938953574432 10.5443631344549 10.4082457150865 10.8151343755638 9.93861251753422 0.0641889925014838 0.0652834766224625 0.0677527446658994 0.0634252165116714 0.0631144839967544 0.0639023950143116 0.0639591962734074 0.0633542309686011 0.0666175241244066 0.0625176877623771 0.0625176877623771 0.0625176877623771 0.0625176877623771 0.065235348817191 0.0658195225088894 0.0625176877623771 0.0655958178575086 0.0632973615943807 0.0633306303754468 5 5|0 -|/ 5864559 5865798 5865095.556 5864253 5866708 - gene protein_coding_gene TRUE TRUE AT5G17770.1 ATCBR (NADH:CYTOCHROME B5 REDUCTASE 1) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor. similar to NADH-cytochrome b5 reductase, putative [Arabidopsis thaliana] (TAIR:AT5G20080.1); similar to NADH:cytochrome b5 reductase [Vernicia fordii] (GB:AAV69019.1); contains InterPro domain Cytochrome-b5 reductase; (InterPro:IPR012260); contains InterPro domain Oxidoreductase FAD-binding region; (InterPro:IPR008333); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709) -0.0241802026346751 -0.290458121518172 0.777079348418554 1 0.087795403550212 20.7240218442470 -0.0241802026346751 0.0409943264557583 AT5G63450_at 1.92435602407091 1.48241149883503 1.98035686586912 1.66684263904886 1.35867308989763 1.72318643943636 1.46214012833252 1.43845083092142 1.76856588398306 1.9065711314285 1.88035009479728 1.75870550387335 1.42475851258505 1.69134992616149 1.87347620494206 1.64544838891237 2.22249431943045 1.73013425036438 1.41219558726252 0.191163949255911 0.192161503712025 0.203352561310620 0.199358390119016 0.194072345219609 0.193303069086901 0.194449310246272 0.195488086240792 0.192855430851746 0.200043174307061 0.191163949255911 0.194747908527750 0.192207148438376 0.198276396401070 0.196216964112379 0.192767117282512 0.209106140341646 0.19331037434012 0.194000645860312 5 5 - 25426293 25426746 25426519.273 25426121 25427799 - gene protein_coding_gene TRUE TRUE AT5G63450.1 CYP94B1 (cytochrome P450, family 94, subfamily B, polypeptide 1); oxygen binding member of CYP94B similar to CYP94B3 (cytochrome P450, family 94, subfamily B, polypeptide 3), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G48520.1); similar to Os11g0483000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067905.1); similar to Cytochrome P450 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93683.2); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0305348161178298 -0.289436379021046 0.777839908424513 1 0.0874964878565874 3.36661078173048 -0.0305348161178298 0.113087919037732 AT5G17780_at 1.80239780151048 2.0465166105473 2.28627075791437 2.46793464979931 1.73594666074613 2.01248403905667 2.60328940897422 2.39397786326402 2.04328223399471 2.69355568518717 2.70407969349189 3.27371146130413 2.34034907017065 2.67033773671794 2.66586621486215 3.19394022341744 3.04350763017874 3.18997296975506 2.02302769522332 0.221000102769533 0.217041338885857 0.229123610386964 0.219395794640992 0.221470185546833 0.220919951346422 0.217041338885857 0.221947645579061 0.230522839743323 0.217348533381384 0.235487477378611 0.226120399232711 0.218989100366514 0.221462565287085 0.219776083075943 0.223175596181027 0.217041338885857 0.221519356731919 0.219975845065241 5 5|0 -|/ 5867528 5868169 5867805.6 5867285 5869052 - gene protein_coding_gene TRUE TRUE AT5G17780.1 hydrolase, alpha/beta fold family protein similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G17720.1); similar to unknown [Sorghum bicolor] (GB:AAQ06255.1); similar to Os07g0685500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060676.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) 0.0269687088448578 0.289049666524636 0.778127831470333 1 0.087383623409402 4.73785680553772 0.0269687088448578 0.079845555411326 AT5G51545_at 9.85414866156109 9.9245100784356 10.1495672180772 10.2082159740018 10.6117075787775 10.4729253737553 9.89939261302768 9.88207346488484 9.60644095784684 9.7237100607541 10.5946454110417 10.7288571936678 10.4089634459756 10.5662353932414 10.8371561490438 10.6438427180671 10.2132986963680 10.4092517856376 9.66067932442863 0.09888898159472 0.0910452704081521 0.0910452704081521 0.0910452704081521 0.0915044878887465 0.093023517648412 0.0961475455950823 0.0927249159803882 0.114727439792408 0.0956805562058524 0.0910452704081521 0.0910452704081521 0.0949181363184146 0.096669136526644 0.0948411166450267 0.0910452704081521 0.098624151494345 0.0961545897748296 0.0985516215748206 5 5|0 +|/ 20953777 20954376 20954018.5 20953652 20954639 + gene protein_coding_gene TRUE TRUE AT5G51545.1 similar to Os02g0125000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045742.1); contains domain Subunit VIII of photosystem I reaction centre, PsaI (SSF81540) 0.0234434645940698 0.288319155115481 0.77867182200848 1 0.0871708239745392 20.2322633520519 0.0234434645940698 0.0289321619046834 AT5G06740_at 1.62003186596772 1.34040432644039 1.86135855175849 1.62310236314061 1.23907102430847 1.63707218604464 1.52926194881936 1.49712171758939 1.69487022478784 1.46337034479078 1.65546309565430 1.32970577721639 1.90077723389493 1.51133213519880 1.35034012188555 1.53963565396249 1.92662099059016 1.64931707199130 1.4504710941388 0.196800429672096 0.192299680726014 0.19986034688605 0.198446894981185 0.193815228127636 0.193098329170205 0.198624881238186 0.201778760198604 0.195778241902731 0.199179325321464 0.192299680726014 0.202810851536303 0.198166047450326 0.205018499759898 0.204266117205218 0.193128266360834 0.19733637122331 0.196849644876255 0.19786661756086 5 5 + 2085470 2086024 2085750.636 2084095 2086053 + gene protein_coding_gene TRUE TRUE AT5G06740.1 lectin protein kinase family protein similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55830.1); similar to OSJNBa0088A01.21 [Oryza sativa (japonica cultivar-group)] (GB:CAD41381.2); similar to lectin-like protein kinase [Populus nigra] (GB:BAA82556.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) -0.0280867751392991 -0.286242116510371 0.780219211034593 1 0.0865686717772945 3.11549611365282 -0.0280867751392991 0.0938963878218735 AT5G51410_at 6.63806168769065 7.14964350679964 7.83287335803513 7.68504904782083 7.78025592413358 7.8205042322127 6.87725536620764 6.47774195327672 6.24642948319182 6.66020310002127 7.61042789468506 8.22458079676212 7.08881357225821 7.43753514865118 7.55327990799113 7.81337879081304 7.88841347660258 6.38131897866568 6.24058722645202 0.189764632077012 0.187251256566849 0.19447293845927 0.187251256566849 0.192688725406618 0.199484054127392 0.192219391093870 0.19371034385321 0.202152885546514 0.198756192385961 0.191437785640056 0.187313554103535 0.193420090861689 0.188776798641643 0.187251256566849 0.189739114438213 0.190956866791466 0.198430930321014 0.193168369566750 5 5 - 20899057 20899597 20899374.636 20897967 20900930 - gene protein_coding_gene TRUE TRUE AT5G51410.1|AT5G51410.2 LUC7 N_terminus domain-containing protein similar to UNE6 (unfertilized embryo sac 6) [Arabidopsis thaliana] (TAIR:AT3G03340.1); similar to salt tolerance protein 3 [Beta vulgaris] (GB:CAC85244.1); contains InterPro domain LUC7 related; (InterPro:IPR004882) 0.0304194386508794 0.28577265701649 0.780569096006841 1 0.0864331645034558 14.2237357215348 0.0304194386508794 0.115415768958267 AT5G60300_at 4.81777152304416 5.15725371711443 5.47935994730825 5.51969686936655 5.00842319450523 5.0791698875932 4.46658865613113 3.96129072583162 3.77241090786528 4.68277496852216 5.60740472714761 5.54145534872509 5.52348022869112 5.68435474417602 5.32022901264531 5.53831446533894 5.53628637047602 6.11867317025913 4.67272690038534 0.250398104874417 0.238798809821671 0.243382693432165 0.241948202485485 0.247754882381349 0.250638962900617 0.239956458818033 0.241318375028089 0.257066042793596 0.242677835072025 0.242269478879594 0.247081942644714 0.246573198740165 0.240284420912202 0.242292243998737 0.239376375639659 0.247242567979259 0.238798809821671 0.241099765560752 5 5 + 24283710 24284190 24283997 24281848 24285255 + gene protein_coding_gene TRUE TRUE AT5G60300.1|AT5G60300.2|AT5G60300.3 lectin protein kinase family protein Lectin Receptor Kinase involved in protein-protein interactions with RGD-containing proteins as potential ligands. Role in cell wall-plasma membrane adhesion. similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G60310.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45430.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985)|similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G60310.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G45430.1); similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G60320.1); similar to lectin-like receptor kinase 7;2 [Medicago truncatula] (GB:AAR11299.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985) 0.0292147043076927 0.284220391976588 0.781726351196746 1 0.0859866682453992 9.92856715712349 0.0292147043076927 0.106285198626507 AT5G44620_at 1.14319599632115 0.774055541172685 1.8400742963042 1.19421636442816 0.900448117941208 1.12301507822962 0.976025950039825 0.963180364984415 1.48912264053354 1.36068883568075 1.33886166204384 1.06475568633238 0.991278576475482 1.21518763507086 1.26275487157924 0.89003545540383 0.838534587813382 0.832409487785343 0.962620666416213 0.204070498673144 0.208458716122195 0.212971025674703 0.205288905371148 0.201629156085019 0.204777641228632 0.205701444585711 0.201629156085019 0.208710167923318 0.213604030685716 0.203442459120625 0.204428537060356 0.202154734302558 0.202333646289771 0.201629156085019 0.206688977407460 0.206331890104448 0.209753788028985 0.207300584139444 5 5 - 18015195 18015710 18015455.455 18015006 18016785 - gene protein_coding_gene TRUE TRUE AT5G44620.1 CYP706A3 (cytochrome P450, family 706, subfamily A, polypeptide 3); oxygen binding member of CYP706A similar to CYP706A7 (cytochrome P450, family 706, subfamily A, polypeptide 7), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G12330.1); similar to putative cytochrome P450 [Matthiola incana] (GB:AAG34695.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0325321388794814 -0.283985367061549 0.781901616989295 1 0.0859192737957721 2.27679544343926 -0.0325321388794814 0.134393209556992 AT5G61650_at 1.57850334033608 1.85116156189108 1.68443560395333 1.48262621185381 1.38444882800748 1.65160678617585 1.64475824780314 1.27202342208913 1.52389683421602 1.66380234965922 1.74476404879643 1.77845933462909 1.44367758139462 1.45468771714254 2.0126583789578 1.80364407541993 1.68581643100524 1.54977735064458 1.25255562776324 0.209728269640557 0.211422289306689 0.21111359428404 0.209728269640557 0.210095279104317 0.215264727430518 0.212863219267691 0.213954699324367 0.209728269640557 0.209728269640557 0.212975847940265 0.21047149971286 0.215305410974656 0.209728269640557 0.214875297432307 0.21674533710255 0.214375017401847 0.212193389276745 0.213222640154456 5 5 + 24795599 24796221 24795921.182 24795472 24796324 + gene protein_coding_gene TRUE TRUE AT5G61650.1 CYCP4;2 (CYCLIN P4;2); cyclin-dependent protein kinase The P-type cyclins (CYCPs) share a conserved central region of 100 amino acids ('cyclin box') displaying homology to the corresponding region of the PHO80 cyclin from Saccharomyces cerevisiae and the related G1 cyclins from Trypanosoma cruzi and T. brucei. similar to CYCP4,3 (cyclin p4,3), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT5G07450.1); similar to PREG-like protein [Picea mariana] (GB:AAC32127.1); similar to Os10g0563900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065406.1); similar to Os04g0544200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053459.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Negative regulatory factor PREG; (InterPro:IPR012389) -0.0283331763815919 -0.283633428819188 0.782164092645124 1 0.0858184564885406 3.15083077624454 -0.0283331763815919 0.0987131109433184 AT5G10250_at 4.15659550106164 3.65424057314943 4.99119982640010 4.37763570652172 6.20067129056509 5.4838795752792 6.04726929221867 5.72840530611286 5.55401221973236 6.44438141124756 8.42058737574245 7.8878944395539 8.86857709230166 8.37134705020405 7.54875001515753 8.50491057902202 7.89802814717258 7.50596473819186 7.47490589271415 0.220634710542798 0.223456247019867 0.217271329822401 0.215338999530833 0.215338999530833 0.222521050159162 0.217438779153273 0.222575017371828 0.230975798554582 0.220922600780326 0.215338999530833 0.215338999530833 0.219454242416295 0.217562187467466 0.219588708638482 0.219870117906908 0.218349905196664 0.221492358274199 0.215338999530833 5 5|0 -|/ 3217152 3217736 3217474.889 3217029 3219369 - gene protein_coding_gene TRUE TRUE AT5G10250.1 phototropic-responsive protein, putative similar to NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3), signal transducer [Arabidopsis thaliana] (TAIR:AT5G64330.1); similar to 80A08_21 [Brassica rapa subsp. pekinensis] (GB:AAZ67606.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB; (InterPro:IPR000210) -0.0403750386779937 -0.282804922758156 0.78278210504753 1 0.0855816057207106 12.3884157693634 -0.0403750386779937 0.193038269944679 AT5G40510_at 2.02169850879484 2.02217588264313 2.12609820242572 2.41398543942241 1.90772179582144 2.61984755515278 1.98243217685587 1.89862848125733 1.94219400697772 1.50129775870991 1.96581272879413 1.69801670407600 1.92396346959602 2.06528719729421 2.11221492807064 1.66981096430360 1.94542960494037 1.98591525625342 1.97621495870491 0.19011468602907 0.200528288155833 0.199698262563676 0.189482528395037 0.195164487917714 0.189482528395037 0.198118191699345 0.190047676659546 0.192103141901454 0.193403173018881 0.191692459909707 0.194270373174158 0.192600283331339 0.191193147441227 0.195223119533786 0.191487072813418 0.197201664631471 0.193804217188373 0.205421634386113 5 5|0 +|/ 16247255 16247993 16247628.5 16246416 16248326 + gene protein_coding_gene TRUE TRUE AT5G40510.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27570.1); similar to Clostridium pasteurianum ferredoxin homolog [Solanum tuberosum] (GB:AAB33256.1); similar to Os02g0725100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047981.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Sucraseferredoxin-like; (InterPro:IPR009737); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.0322367369087457 0.282146762548789 0.78327316251293 1 0.085393938797824 3.98776113769514 0.0322367369087457 0.133714876857533 AT5G23580_at 4.80464316277448 4.77835776259377 5.83958634418819 5.74295424186002 4.74242422173309 5.68795667611193 4.1904585905884 4.44801885603346 4.45667357955804 4.39289724861078 5.28705983063715 5.48079841942415 4.6328574336623 5.27692683285742 4.76941135466452 5.23356806123223 4.472878315092 5.42453530003907 3.99403950062204 0.245937114135257 0.236798689562364 0.235553284970349 0.236770949705824 0.224186149267614 0.236856123096681 0.229237248366294 0.223870882344112 0.232863665112475 0.228178817290962 0.223870882344112 0.231327682764415 0.229517686433923 0.228886956459210 0.223870882344112 0.229881511408287 0.236701055347162 0.227986726179794 0.229266930920108 5 5|0 -|/ 7950402 7951142 7950770.3 7950205 7952535 - gene protein_coding_gene TRUE TRUE AT5G23580.1 CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9); calcium- and calmodulin-dependent protein kinase/ kinase unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+ similar to ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G35670.1); similar to CPK4 (calcium-dependent protein kinase 4), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G09570.1); similar to CPK1 (calcium-dependent protein kinase isoform AK1), calcium- and calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to calcium dependent protein kinase [Solanum tuberosum] (GB:BAB63464.1); similar to calcium-dependent protein kinase 1 [Vicia faba] (GB:AAV28169.1); similar to calcium-dependent protein kinase [Vitis labrusca x Vitis vinifera] (GB:AAR28766.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0370675165286971 -0.281970708895703 0.783404534052563 1 0.0853438120337383 9.7060289251761 -0.0370675165286971 0.170474005059182 AT5G63690_at 1.58324748971783 1.63644088386775 1.83441698517576 1.31240704569875 2.66965753308830 1.87516989904747 2.19837445584935 1.34572589025158 1.77338691953280 1.76483877412558 2.17392940051578 1.99878353833409 2.13496800634410 1.98665497054473 1.72374925836896 1.6055538533861 2.09523796039645 1.64843287681755 1.79218043865410 0.195994756498634 0.199655994274666 0.194928992367795 0.205185980195200 0.203572730479429 0.195064706615305 0.207125670036435 0.197785436717655 0.194928992367795 0.202924754972405 0.195991728426748 0.199153371150091 0.204864112163903 0.197026670591712 0.194928992367795 0.194928992367795 0.197273746584317 0.202207591246867 0.209070378916541 5 5 - 25510121 25510458 25510297.364 25510090 25510509 - gene protein_coding_gene TRUE TRUE AT5G63690.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15806.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15808.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) 0.0442843438179705 0.281266851869279 0.78392982412393 1 0.0851437144009797 3.65578791143341 0.0442843438179705 0.221181469190339 AT5G19820_at 7.54268461338213 7.5777320967506 8.48644713546398 8.3723341200727 8.70885768221086 8.00349663387443 7.95774214605663 7.89375309049768 6.88067437112529 6.80763430621607 8.58856194268581 8.50649761889164 8.42720616396344 8.13354258644518 8.41534168750981 8.28770687375403 8.12633851387092 8.04361812809211 7.40739086278126 0.16237808163853 0.152706371185013 0.156209150612667 0.154810005333305 0.156357805888230 0.158080836405272 0.161156615609290 0.156646917780249 0.181885497806056 0.169855597193723 0.157895266959395 0.162981567675559 0.156970015688949 0.168065493993756 0.158726397680230 0.157600758508184 0.164771366232191 0.152706371185013 0.167823462677208 5 5|0 -|/ 6695757 6696660 6696239.9 6695226 6701313 - gene protein_coding_gene TRUE TRUE AT5G19820.1 EMB2734 (EMBRYO DEFECTIVE 2734); lyase similar to importin beta-2 subunit family protein [Arabidopsis thaliana] (TAIR:AT4G27640.1); similar to HEAT repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98397.1); similar to HEAT repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98400.1); similar to Armadillo-like helical [Medicago truncatula] (GB:ABD28408.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) 0.0309262873754894 0.280735986539516 0.784326084865447 1 0.084993121701634 15.7418817078432 0.0309262873754894 0.124296012526426 AT5G43830_at 10.7251855954600 10.6896519307069 11.0973670407234 10.9261210306653 11.1874279057578 10.8575111079177 10.7066132139976 10.5805826815385 10.5800886937433 10.6021210624378 11.4273256679558 11.5359090965162 11.3477348080109 11.4708941500469 11.6067654212939 11.426808442643 11.3761592358921 11.3522691990792 10.5046823700494 0.073745336369259 0.0696457960335572 0.0716884659636916 0.0724032073568175 0.071729443640549 0.0699110922147024 0.0698993506222297 0.0711123239123788 0.0817266049334208 0.0708086524875439 0.0733324013200351 0.0706306149672944 0.069497450168144 0.071329926163474 0.0758460836474957 0.0705769918405697 0.0731476683364658 0.069497450168144 0.0708171346133792 5 5|0 -|/ 17639900 17641280 17640435.6 17639563 17641556 - gene protein_coding_gene TRUE TRUE AT5G43830.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22850.1); similar to aluminum-induced protein-like protein [Thellun (GB:AAM19711.1); contains domain no description (G3D.3.60.20.10); contains domain N-terminal nucleophile aminohydrolases (Ntn hydrolases) (SSF56235) 0.0250790317111831 0.279460505281812 0.785278421074654 1 0.0846324454015842 21.8489478773908 0.0250790317111831 0.068201241699968 AT5G08160_at 8.5224446989252 8.61053298843117 9.19258027534686 9.08091564703237 9.23643055590778 8.75060962186842 8.74054752249242 8.44018754379999 7.99100088439437 7.30742737953146 8.86952340898359 8.88629620941248 8.52427499394091 8.64142999724745 9.09110884790854 8.31116458916442 8.35081200676843 8.83888871697734 6.96289204803425 0.120387924842971 0.121374101781947 0.130393327087807 0.120408915664601 0.121300449457383 0.125312877732739 0.120134536465079 0.122361370000448 0.132736668423432 0.124760011356299 0.125348988106269 0.119988820704383 0.126079467128591 0.132503522638362 0.123183673180508 0.124773837769258 0.132139730225044 0.119856321873610 0.132542729792814 5 0|5 /|- 2625930 2626636 2626293.5 2625560 2628111 - gene protein_coding_gene TRUE TRUE AT5G08160.1|AT5G08160.2 ATPK3 (Arabidopsis thaliana serine/threonine protein kinase 3); kinase Encodes a serine/threonine protein kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.2); similar to putative serine-threonine protein kinase [Cucumis sativus] (GB:CAI30891.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719)|similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G32850.2); similar to putative serine-threonine protein kinase [Cucumis sativus] (GB:CAI30891.1); similar to serine/threonine protein kinase [Gossypium hirsutum] (GB:AAZ39949.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.0282076801961155 0.279057830919488 0.785579153981244 1 0.0845189142489245 16.8765948318691 0.0282076801961155 0.101862426067468 AT5G19050_at 6.51644541343266 6.6533438784111 7.6493346145094 7.59328258117786 7.86563736577457 7.82451440880936 5.93193959184464 6.40406378356469 6.6252676774798 6.19749009119902 7.31765447755848 7.12767970161198 7.04771183422717 6.99659966949055 6.72391530715174 7.36218382811157 6.69747478633513 7.02946978638877 5.96677100433905 0.189413817098699 0.183900653992973 0.183664022728432 0.191509087059481 0.189458839977914 0.189720263668810 0.191405094486898 0.197336185621647 0.193779333337308 0.185225702613953 0.190162906674556 0.183588283796135 0.196615982588056 0.191908723756145 0.185941076979621 0.182234517717981 0.195734982713634 0.186723269698917 0.187119534360858 5 5|0 +|/ 6370505 6371621 6370968.143 6369269 6371906 + gene protein_coding_gene TRUE TRUE AT5G19050.1 similar to unnamed protein product [Kluyveromyces lactis] (GB:XP_455602.1); similar to Os07g0211800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059175.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Protein of unknown function DUF1749; (InterPro:IPR013744) 0.0265880492301116 0.278941063121975 0.785666367592879 1 0.0844860225439533 13.7053264204566 0.0265880492301116 0.0859152131212251 AT5G61670_at 10.9969104872053 10.8072731983194 11.8546699064570 11.6390254909233 11.6888720052514 11.6027571453124 11.6818504087777 11.5871004582919 11.2892615646351 11.3903308182531 11.9889984727724 11.8427176644253 11.9233754904043 11.9421139690595 11.7435245628898 12.0204363566143 12.0067497339612 12.0054966561264 11.3396562356568 0.069551242281567 0.0688704672444436 0.0687245576397434 0.0699020828843382 0.06791727969321 0.0719736500862605 0.069182418437869 0.072343228279438 0.0765864380044692 0.0670901076862857 0.0698620063872448 0.0670901076862857 0.0694635786235118 0.0730873351654173 0.0706942235675833 0.0670901076862857 0.0779479408765839 0.0673667891164443 0.0680035655691208 5 0|5 /|+ 24801547 24802388 24801984.75 24800730 24803171 + gene protein_coding_gene TRUE TRUE AT5G61670.1|AT5G61670.2 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. similar to chaperone protein dnaJ-related [Arabidopsis thaliana] (TAIR:AT5G06130.2); similar to Os02g0651300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047593.1); similar to Os02g0535000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047038.1); similar to chaperone protein dnaJ-related (ISS) [Ostreococcus tauri] (GB:CAL57920.1); contains domain Cysteine-rich domain of the chaperone protein DnaJ. (SSF57938); contains domain no description (G3D.2.10.230.10) -0.0238400631004063 -0.276869060363346 0.787214454133854 1 0.0839046248746908 23.1192704639656 -0.0238400631004063 0.0544113523436013 AT5G16860_at 0.550800550981664 0.80985617374328 1.25433936315821 1.45100619905478 1.05113947311487 1.24449571857967 1.13171133359381 1.05361263310255 1.65900128339117 1.24981444971457 1.01835506507211 0.89726984836538 1.43917094328265 0.932504769837037 1.09324090015711 0.862858545360484 1.38733672019128 1.06753661224403 0.856898355590739 0.187040959126110 0.18344291834821 0.191026963813716 0.190333909472675 0.184741539414283 0.185374568201736 0.183242588569619 0.185272150437924 0.189810734806358 0.190505135009347 0.190104170264088 0.191074736077307 0.189449212925467 0.184574240448912 0.190828436461693 0.183946739793439 0.185546608912210 0.186000414993186 0.186278168889322 5 5 + 5545797 5546335 5546094.636 5543837 5546389 + gene protein_coding_gene TRUE TRUE AT5G16860.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to Os04g0218100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052259.1); similar to OSJNBa0060B20.9 [Oryza sativa (japonica cultivar-group)] (GB:CAD39781.1); similar to PPR868-14 [Physcomitrella patens] (GB:BAD67154.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0247132998856346 0.276562312078873 0.78744372177932 1 0.08381891492323 2.23963128323073 0.0247132998856346 0.0668613226687836 AT5G14150_at 1.43600484298810 1.20164547516582 1.29169417125035 0.88140969403471 0.933454595159729 1.57834770496473 0.838297953465018 0.977345530128483 1.02788371341611 0.75856426590325 1.13645678220928 1.36767302211198 0.63500432851397 0.79573091823356 0.783541963064586 1.13883074472326 1.31551642298936 1.27185037174865 1.31862545449824 0.228942825259541 0.224180321703143 0.228933643465526 0.230531516640184 0.223779236063176 0.224803190926398 0.231194629445161 0.228935514917479 0.222867443055070 0.225535191869344 0.228727038487813 0.22525630399819 0.221345991526790 0.225965722389116 0.229844683863655 0.236112592754042 0.229797933450865 0.230328317570951 0.225935859759230 5 5 - 4565276 4565781 4565548.182 4565174 4566990 - gene protein_coding_gene TRUE TRUE AT5G14150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11420.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); similar to Os01g0756600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044289.1); similar to Os04g0494800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053189.1); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain Protein of unknown function DUF642; (InterPro:IPR006946) -0.0322886839425021 -0.275358802776602 0.788343444182342 1 0.0834835404614087 2.18757501946388 -0.0322886839425021 0.140428183543257 AT5G38040_at 2.8061787260795 2.67211235357954 3.20528248181323 3.2746241021235 3.38921787568199 3.27106583313322 2.86194417401390 2.9860179724761 3.08266279396625 2.36314702261817 3.91932080436595 3.25975800322776 3.54397294552760 3.27115356186145 3.35910207805703 3.18044340623884 3.70370682461789 3.33724292170653 3.52808203335371 0.169669255620990 0.165429777961419 0.16754519050162 0.165516133621184 0.175816008644541 0.163607727599073 0.167484742887517 0.165740705471717 0.171382353284451 0.165174734811670 0.173158867288612 0.172113800007024 0.165682215282230 0.161467404302124 0.170857813519973 0.163860498140791 0.174558559045374 0.166286354475819 0.164252592451358 5 5 + 15203240 15203714 15203506.182 15202307 15203738 + gene protein_coding_gene TRUE TRUE AT5G38040.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G38010.1); similar to glucuronosyl transferase homolog, ripening-related - tomato (fragment) (GB:S39507); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.0227567171132285 -0.274251683308947 0.789171393456033 1 0.0831762983120825 6.27737286561917 -0.0227567171132285 0.0395142066160726 AT5G22550_at 0.608534992648523 0.803100282428236 0.824537034677179 0.865432188735212 0.330449324805352 0.689804491787818 0.277505692096157 0.473412409779136 0.533556065161316 0.415567020104442 0.43384095492599 0.292772692908415 0.506740144562046 0.968375231029686 0.498578885524396 0.384834467574369 0.257166398676977 0.83546545741676 0.579740339636946 0.191366445899564 0.191293110329408 0.186555343115332 0.194085768787182 0.185088638276016 0.185130741347313 0.186946793773426 0.188176206267968 0.198808837645119 0.187298246256974 0.187261146142587 0.190938686752148 0.185635542580264 0.189760947308756 0.183914211117354 0.188170001835663 0.182703809676683 0.191464513970003 0.185390162017227 5 5 - 7483973 7484507 7484202.273 7483873 7485485 - gene protein_coding_gene TRUE TRUE AT5G22550.1|AT5G22550.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22560.1); similar to Plant protein of unknown function [Medicago truncatula] (GB:ABE78531.1); similar to Os04g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053253.1); contains InterPro domain Protein of unknown function DUF247, plant; (InterPro:IPR004158)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22560.1); similar to Os04g0505400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053253.1); similar to Plant protein of unknown function [Medicago truncatula] (GB:ABE78995.1); contains InterPro domain Protein of unknown function DUF247, plant; (InterPro:IPR004158) 0.0254666004517652 0.273991976436170 0.789365652494833 1 0.0831044023100437 1.12501851247548 0.0254666004517652 0.0787434174225109 AT5G61070_at 2.02198120291415 2.06843968272570 2.15700215200544 2.34949117502537 2.09680163220171 2.03482454430897 2.17692814577576 1.84453069414221 2.45953399452570 1.89965612907085 2.42657797418179 2.51531709185486 2.44082010452141 2.37234454617554 2.77356353560047 2.24548300237493 2.06342433592324 2.36106598916329 2.15308754121778 0.225037100738898 0.224637587664005 0.227174699262352 0.220779618233801 0.229101550133417 0.224362580935924 0.227075416360977 0.221586139995911 0.226014237374956 0.230787876542994 0.221015066495843 0.221395173477942 0.223601423751639 0.219686830671123 0.226015610215169 0.223919095384322 0.220273404065577 0.221911552078635 0.223260401647053 5 5 - 24588475 24589081 24588765.8 24588397 24591598 - gene protein_coding_gene TRUE TRUE AT5G61070.1 HDA18 (histone deacetylase 18); histone deacetylase Encodes a protein with similarity to histone deacetylases, a class of chromatin remodeling factors which act on H3/H4 histones. Expressed in roots where it appears to regulate the expression of epidermal cell fate genes controlling hair cell differentiation. similar to HDA05 (HISTONE DEACETYLASE5), histone deacetylase [Arabidopsis thaliana] (TAIR:AT5G61060.1); similar to Os07g0602200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060205.1); similar to HDA1 [Zea mays] (GB:AAP92528.1); contains InterPro domain Histone deacetylase superfamily; (InterPro:IPR000286) -0.0245299820310660 -0.273684397157462 0.789595739211118 1 0.0830193403191928 4.37904180067702 -0.0245299820310660 0.0678099722160519 AT5G22830_at 9.4655794874706 9.27368063454952 10.3342285724334 10.0697562245049 10.4739650729852 10.0441087023443 9.8795432729029 9.60277036203592 9.76520033059473 9.80674819049143 10.6647581581577 10.3143392587616 10.3333780247189 10.3664487494145 10.2825358389968 10.3952037091434 10.0895840351164 10.3920635613261 9.67500620365546 0.0825574141692101 0.0840880199249358 0.0825339090948426 0.0835595099684846 0.0802037050460327 0.0834752063782514 0.0818197455850844 0.082401602337635 0.0866954319565087 0.0805249686257485 0.0801430483232442 0.0801430483232442 0.0806644009757548 0.0812047683170647 0.0813715145743176 0.0801430483232442 0.0881555885203631 0.0821676337224326 0.0801430483232442 5 5|0 +|/ 7629393 7630594 7629999.714 7627600 7630996 + gene protein_coding_gene TRUE TRUE AT5G22830.1 GMN10 (Arabidopsis thaliana Mg transporter 10) putative Mg(2+) transport protein similar to magnesium transporter CorA-like family protein (MRS2-7) [Arabidopsis thaliana] (TAIR:AT5G09690.2); similar to magnesium transporter CorA-like family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98245.1); similar to Os03g0684400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050919.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0279675695843427 -0.273417241610969 0.789795603770513 1 0.0829455340014655 19.9448409537542 -0.0279675695843427 0.105001626545295 AT5G09980_at 0.768257213689462 0.972018756261236 0.905216374365816 0.801097365954014 0.915036268687759 0.894149879500887 1.17379071988232 0.952765816212011 0.948011118658627 1.05875462935192 1.28021767931424 1.02359145995525 0.795425899188295 1.11772540492590 1.15784923062623 0.596348585420874 1.15831775115097 1.49350821608417 0.447362876665667 0.173661229488646 0.171743431786094 0.172951749152002 0.173014194264796 0.173818116002425 0.169910766404504 0.173053135806362 0.171904791369879 0.173496970804138 0.178683446176190 0.169910766404504 0.182561993655080 0.174400190606282 0.173946616757253 0.171356573321986 0.182051157579977 0.176886869779141 0.180018258268524 0.177166548694699 5 5|0 +|/ 3122800 3123703 3123174.2 3122732 3123965 + gene protein_coding_gene TRUE TRUE AT5G09980.1 PROPEP4 (Elicitor peptide 4 precursor) Identical to Elicitor peptide 4 precursor (PEP4) [Arabidopsis Thaliana] (GB:Q9FIA9;GB:Q8L9J1); similar to 52O08_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67563.1) 0.0235188783358879 0.272559041430018 0.790437748263778 1 0.082708921808531 1.87074950093184 0.0235188783358879 0.0551737197205437 AT5G01960_at 6.82692956373918 6.95008287715058 8.05875625011457 8.01451847440985 8.26643085284465 7.85924732789446 6.88300420521123 6.58398955886713 7.41420317828041 6.88831505775648 8.0216802328666 7.9031047757561 7.88861540033337 7.77665164039441 7.20929230731217 7.84897147296283 7.91970803511208 7.99728038136245 7.10663607875529 0.155888485472504 0.160954435746125 0.15754966274044 0.162295155954825 0.159062293992304 0.168911734579642 0.164641529694599 0.164158729622158 0.163838380227104 0.172066197417959 0.154875886466076 0.15665312009718 0.151288565731343 0.169623790960204 0.164243246934650 0.155279270049234 0.174806201750909 0.159018458969424 0.156053073805470 5 5|0 +|/ 371672 372730 372293.5 370397 372966 + gene protein_coding_gene TRUE TRUE AT5G01960.1 zinc finger (C3HC4-type RING finger) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65040.3); similar to Os05g0316000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055172.1); similar to Os01g0168400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042129.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAV32165.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0263398684848575 -0.271990294393128 0.790863400707532 1 0.082552517719243 14.9088937899589 -0.0263398684848575 0.0903093189017409 AT5G32610_at 1.08051489853895 0.608603329934184 1.04507824664535 0.973477251267864 0.779983425939771 1.68425527902727 1.00010829352939 1.05554672180723 1.27134358738174 1.12033117267987 1.3084070632186 1.16351492710068 1.03472977538439 1.29119009044437 1.18114593810332 1.17123180293752 1.11505184352000 1.23248512332271 1.07242130490594 0.223113813814803 0.220350703522766 0.218893431551098 0.219487478936950 0.240321827283940 0.218718848798206 0.225732436492384 0.220559668938877 0.231707516415707 0.231538834830654 0.218718848798206 0.221998572799187 0.232280205524308 0.220275940608429 0.224287857193434 0.221924151467342 0.223659911710777 0.230606163893624 0.230566280214655 5 5|0 -|/ 12273951 12275123 12274371.714 12273907 12276326 - gene protein_coding_gene TRUE TRUE AT5G32610.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G33715.1) 0.0366218302820822 0.271706492537324 0.791075825871902 1 0.0824745932510285 2.19940506024948 0.0366218302820822 0.177210699535671 AT5G59270_at 1.78882069854218 1.58102145842845 1.55219044866254 1.41850194924924 1.35853469936781 1.27340941799983 1.12688669158779 1.04223158509761 1.27228664940341 1.55312979613585 1.63595206447842 1.56517174008929 1.64168087846312 1.44059821225498 1.56951134000061 1.53892419672419 1.51344073415307 1.08735221632977 1.27916281914315 0.223224856674533 0.233500049120195 0.219907498212467 0.224513972717076 0.216572735692517 0.225310984744581 0.219822590281374 0.225181891892250 0.221089441232269 0.219252555861701 0.221477289520674 0.219391370806412 0.223452017899015 0.220040415629422 0.218475925944275 0.217962816373662 0.217757529787256 0.221798972840758 0.216704816697531 5 5 - 23928407 23928896 23928683.455 23928377 23930461 - gene protein_coding_gene TRUE TRUE AT5G59270.1 lectin protein kinase family protein similar to lectin protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G59260.1); similar to Os04g0531500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053397.1); similar to OSIGBa0125M19.7 [Oryza sativa (indica cultivar-group)] (GB:CAJ86404.1); similar to receptor kinase Lecrk [Gossypium hirsutum] (GB:AAP47579.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup; (InterPro:IPR013320); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Concanavalin A-like lectin/glucanase; (InterPro:IPR008985); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterPro:IPR001220) -0.0228293628584371 -0.269997178735444 0.792355620054924 1 0.0820069561042914 2.82633562413651 -0.0228293628584371 0.0475399586854242 AT5G39680_at 1.82185972958564 2.05283901564623 2.22623638429703 1.99853114818808 1.95230118253354 1.88773748094117 1.40838401572231 1.70011307151823 1.54931070568448 1.67490768958579 1.12052360360792 1.59752802271660 2.00048375378126 1.75710806424211 1.35761810445020 1.26797728896683 2.11088065760978 1.67207869539628 1.48379418809222 0.200416528508764 0.200948935873868 0.197969477044871 0.204143246522705 0.198936527069572 0.197113453342447 0.202322703936130 0.197241892194855 0.197113453342447 0.203306598846329 0.205151049021327 0.197113453342447 0.201662902616869 0.201812616856060 0.20739276560995 0.197377214302307 0.198860337391936 0.206328380982733 0.198312360982898 5 5 - 15901472 15902034 15901723.818 15901229 15903616 - gene protein_coding_gene TRUE TRUE AT5G39680.1 EMB2744 (EMBRYO DEFECTIVE 2744); binding similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G22070.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE80362.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0246260702014758 0.267158098701067 0.794482708024312 1 0.0812366623127944 3.47093140437096 0.0246260702014758 0.0763160116418839 AT5G52620_at 0.619126618314383 0.653134422360463 1.06316770502819 1.14542183558761 0.595349079123379 0.95799063862639 1.02395374242005 0.788998837056633 0.939838774839855 0.606063463967233 0.529053231181498 0.541477646969448 1.16837821533101 1.20313341912098 1.09338103623578 0.731706334882151 0.907536336315165 0.73686799446612 1.05305933188547 0.196840359765499 0.193540231080922 0.193540231080922 0.198061152093908 0.193540231080922 0.194426180114071 0.193540231080922 0.193540231080922 0.193540231080922 0.203246153461901 0.195232497330980 0.20178181239304 0.196556834664591 0.199379313482454 0.197509177831351 0.193540231080922 0.194990434556206 0.194552863927905 0.201473150234126 5 5 - 21365805 21366330 21366087.273 21365780 21366907 - gene protein_coding_gene TRUE TRUE AT5G52620.1 F-box family protein similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G57590.1); similar to Probable disease resistance RPP8-like protein 2 (GB:Q9MAG6); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain F-box associated type 3; (InterPro:IPR013187); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) 0.0244942762709315 0.265700076937567 0.795575766237817 1 0.080844193819318 1.72102401000312 0.0244942762709315 0.0763473129213143 AT5G11540_at 2.12276240931371 2.75170793101327 2.28360748770754 2.79291203713079 2.19442804417456 2.30096217897316 1.82034791380674 2.42971272023075 2.75707016755513 2.57981882699482 3.21653967616929 3.29789160265462 2.92563741826265 2.9890238735932 3.40548603105783 2.79946010387116 2.84625182771959 3.2109506598032 2.63380595626009 0.212736307276614 0.212736307276614 0.212736307276614 0.213910397641173 0.216815653324648 0.219367602857929 0.213834579813098 0.219039934766099 0.223031274965014 0.217729320634244 0.221614336683313 0.219801916513464 0.220193426789925 0.216636937681611 0.217311154119889 0.214567494180301 0.214141859509684 0.215704823928625 0.212736307276614 5 5 - 3703010 3703557 3703309.727 3703003 3704982 - gene protein_coding_gene TRUE TRUE AT5G11540.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46740.1); similar to Putative FAD binding domain containing protein, identical [Solanum tuberosum] (GB:AAV31183.1); similar to Os03g0563100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050492.1); similar to Os01g0687800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043916.1); contains InterPro domain Plant-specific FAD-dependent oxidoreductase; (InterPro:IPR010030); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094) -0.0356022181285691 -0.26504926214313 0.796063821635081 1 0.080669691768437 5.20870682333287 -0.0356022181285691 0.176281348415725 AT5G53490_at 10.2196471731867 10.2653402752768 10.4239506683670 10.4262781889727 10.9776474236468 10.5615779655308 10.5594555629106 10.4675427303086 10.4026723035943 10.2736588825690 11.6381716005534 11.5688288172708 11.2988494082742 11.4096723641288 11.5484694895960 11.3058703838012 10.7517682631809 11.3207416179598 10.2533845540943 0.108175527795525 0.108991590678977 0.116873484298272 0.111334841587714 0.106100770153181 0.11415264686568 0.105121573848431 0.106825954387612 0.127281418006422 0.115962541221898 0.105121573848431 0.106807204873916 0.105121573848431 0.112289381958291 0.105121573848431 0.105487407440464 0.107916095378004 0.105126737054015 0.113557375862011 5 5 - 21740716 21741449 21741158.727 21740533 21741868 - gene protein_coding_gene TRUE TRUE AT5G53490.1|AT5G53490.2 thylakoid lumenal 17.4 kDa protein, chloroplast thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Identical to Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) [Arabidopsis Thaliana] (GB:P81760;GB:Q93Y82); similar to thylakoid lumenal protein-related [Arabidopsis thaliana] (TAIR:AT1G12250.2); similar to Os10g0502000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064989.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL53570.1); contains InterPro domain Pentapeptide repeat; (InterPro:IPR001646) 0.0242201156512409 0.264668944977342 0.796349069353364 1 0.0805679131801123 21.3202808684491 0.0242201156512409 0.0741625634972827 AT5G37210_at 1.81819648701563 1.61483204892915 1.77245769848245 2.24623073524918 1.46354823904095 2.08908308336826 1.68760182088582 1.67401619963691 1.56426482876031 1.58654134054581 1.64788800490554 1.66667009419711 1.52371131930994 1.96317122814210 1.74215943698083 2.12884254094583 1.83377137785113 1.44126319008703 1.68778480862862 0.207238091032787 0.207529191975858 0.216744389073032 0.218704808646509 0.205125421306503 0.205125421306503 0.209397186577198 0.210889004224708 0.210578456161381 0.213811432787986 0.210240284854159 0.211899412681414 0.209822620328546 0.210247401556888 0.207076114718247 0.205125421306503 0.215860049348168 0.212475079359327 0.208169306106424 5 5 - 14746469 14747274 14746987.091 14746455 14748612 - gene protein_coding_gene TRUE TRUE AT5G37210.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02540.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G26380.1); similar to MEE53 (maternal effect embryo arrest 53), zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G10560.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.0310022775845457 0.264517111780799 0.796462956903266 1 0.0805273205796493 3.47389494325805 0.0310022775845457 0.140302023083274 AT5G07110_at 2.38044827052795 2.6221747066893 2.04782021377939 2.00899595791439 2.72239271212544 2.69031656362033 3.08308503079769 3.28063459155334 3.51540033294835 2.92925311938411 5.61495847762056 5.31452403635847 4.89166948609928 5.06439282657704 5.3503606015878 3.99000813398041 3.48345283927082 5.20134628646298 3.58212531236238 0.256884988628341 0.242338369030937 0.246412124269561 0.249382347220395 0.257426979048124 0.250551182374646 0.242338369030937 0.242338369030937 0.25008861996006 0.242338369030937 0.242338369030937 0.246187727685934 0.246190581802601 0.256551919638816 0.24774881320387 0.242338369030937 0.242374080430426 0.242338369030937 0.246240915828749 5 5 + 2206338 2206746 2206542.818 2206001 2206929 + gene protein_coding_gene TRUE TRUE AT5G07110.1 prenylated rab acceptor (PRA1) family protein similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT5G05380.1); similar to prenylated Rab acceptor protein 1 [Oryza sativa (indica cultivar-group)] (GB:AAV65110.1); contains InterPro domain Prenylated rab acceptor PRA1; (InterPro:IPR004895) -0.0227888761167901 -0.264431826418686 0.796526930213403 1 0.0805045296136947 6.70753284298912 -0.0227888761167901 0.0547229661654937 AT5G58200_at 9.4012941298754 8.9687380620047 10.1210655191667 9.6816875348146 10.3169000498697 10.0184146243315 8.97592368432542 8.45786257419411 9.33346133777136 9.32351768340705 9.86088901283257 9.75870738157108 9.89313156968396 9.6839890574497 9.53132651572939 9.97439073755634 9.77775959075902 9.74838428257839 9.46246469875476 0.102500229900214 0.10426832843905 0.0980442586218912 0.104378497998204 0.110805434104325 0.0980442586218912 0.104717258270702 0.108750067857156 0.110532359834655 0.101605539665983 0.102093239235303 0.0990188764216173 0.102350511722104 0.108872850264995 0.106525073933295 0.102486967413242 0.100047273726653 0.102858966973699 0.102384326769927 5 5|0 +|/ 23568076 23569046 23568589.7 23566860 23569278 + gene protein_coding_gene TRUE TRUE AT5G58200.1 similar to Metallophosphoesterase [Crocosphaera watsonii WH 8501] (GB:ZP_00514094.1); similar to Os06g0182400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056984.1); contains domain Metallo-dependent phosphatases (SSF56300) 0.0319957242280846 0.264380427226583 0.796565485963085 1 0.0804907976114431 19.068595859905 0.0319957242280846 0.148629540010333 AT5G10510_at 0.404137283004869 0.295402825074486 0.359381019885714 0.501700475677641 0.678264993564234 0.285586355282208 0.992847768373847 0.74826595996385 1.06686862287527 0.407304779250916 0.983098189873075 1.08514271096309 0.880681741365297 1.07626259007623 1.35841594584934 0.908679795881685 0.454853776880920 0.609137917979987 0.66106379696339 0.215332991597119 0.211783505711815 0.214725998290085 0.214150081824395 0.211783505711815 0.213453269577347 0.211783505711815 0.215515452091177 0.221316872543282 0.216887150592493 0.216564756822983 0.213982482039634 0.220328807249824 0.213726794892247 0.211783505711815 0.214682221385347 0.223985367734075 0.226372207130735 0.211783505711815 5 5 + 3319577 3319984 3319773.182 3316037 3320009 + gene protein_coding_gene TRUE TRUE AT5G10510.1 AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor similar to AIL7 (AINTEGUMENTA-LIKE 7), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65510.1); similar to 117M18_31 [Brassica rapa] (GB:AAZ66950.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0250922920576232 -0.2633111917457 0.797367673826888 1 0.0802057335083419 1.34883824342264 -0.0250922920576232 0.0858488560059892 AT5G28440_at 1.26203634773914 1.21884507776273 0.915446505728098 0.926242078173733 1.21219295505939 0.99837886873964 1.01131095669885 0.98686218942227 1.45499406708611 1.01861789896666 0.981199406140977 1.41246274168893 0.993344159331153 1.51295261605607 1.10610075613886 1.33812066307889 1.48067902236684 1.49180438517597 0.76435067488655 0.229778264119429 0.232772893112914 0.226283882516100 0.231329067939427 0.233475203629836 0.228128261659243 0.229079621784589 0.226283882516100 0.24622496962909 0.230198651268663 0.226427584964201 0.232001149698583 0.233046300712468 0.227561296192298 0.242282312130358 0.228185909920500 0.242331763865776 0.229749727586941 0.245540901601005 5 0|5 /|- 10367706 10368122 10367942 10367675 10369018 - gene protein_coding_gene TRUE TRUE AT5G28440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28350.2); similar to WD40-like [Medicago truncatula] (GB:ABD28704.1); contains domain SUBFAMILY NOT NAMED (PTHR22746:SF4); contains domain FAMILY NOT NAMED (PTHR22746) -0.0217687260002274 -0.263177142023885 0.797468261217293 1 0.0801700754656144 2.25086629694564 -0.0217687260002274 0.0380311930991785 AT5G36190_at -0.427234078593285 0.344461530094661 -0.0146687325393836 0.104219194370494 -0.0798423421936136 0.169671268462347 0.225245857830149 -0.236164802723431 -0.076599202061934 0.355643152723566 0.0635470847076648 -0.0715623697813208 0.276906624677593 0.118474544513133 0.00494274424046162 0.353772711623156 0.0932850361630103 0.407033255191678 -0.113799508049796 0.187700115169673 0.197757300866564 0.196301647252809 0.189484163359048 0.187700115169673 0.200514567765470 0.194037239963262 0.192423446400027 0.195440459693054 0.195322619447694 0.199410630687583 0.194172871893223 0.197401411604657 0.188156467718359 0.195434567189180 0.187700115169673 0.191732682968957 0.191063832034695 0.193867319699099 5 5 - 14260373 14260709 14260523.818 14260339 14260776 - gene protein_coding_gene TRUE TRUE AT5G36190.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G36200.1) 0.0335796839667185 0.262916677309309 0.797663718129554 1 0.0801008414596972 0.116151704232259 0.0335796839667185 0.162782293654226 AT5G16100_at 0.422192437377015 0.227695594571122 1.15771488906127 0.617339808178023 0.425400663119361 0.591612925973082 0.0532957120905436 0.484714331912507 0.71378526326116 0.703270107874603 0.785862298895557 0.417448700830134 0.76675764873476 0.0833009363699119 0.302908195296579 0.0181845124650319 0.151143004282610 0.628444720600404 0.504240389307457 0.220029164707146 0.21840228963572 0.227885660077125 0.239955203791357 0.224722331637480 0.219736733697801 0.21840228963572 0.21840228963572 0.21840228963572 0.238986890043281 0.222629256083479 0.223469767028816 0.226476367436483 0.220226639119229 0.219228045165138 0.218788238587402 0.225188658069171 0.226114152962473 0.223095906036024 5 5 - 5258584 5258991 5258799.545 5258554 5259722 - gene protein_coding_gene TRUE TRUE AT5G16100.1 similar to hypothetical protein [Cleome spinosa] (GB:ABD96916.1) 0.0290851078847351 0.260675355857409 0.799346241951349 1 0.0795078708694335 1.01483988145142 0.0290851078847351 0.127589859114489 AT5G28610_at 1.53305849429097 1.19040056979112 1.29593187020140 1.47245809441989 0.836628494048755 1.21686062731394 1.40470525651658 1.10093273342116 1.14228866199436 1.55334595562116 1.5784947906077 1.65774420673268 1.52732365976316 1.55217735993995 1.36081134537358 1.31590783723894 1.71632528023219 1.5172318485458 1.20997587551566 0.183145338796166 0.188724843555761 0.187214990558962 0.192285502481592 0.187050504997288 0.183233725760334 0.188980361156211 0.186418675610371 0.183591717455319 0.187999826458492 0.187153355966483 0.191445175867989 0.18661707773937 0.190068088588417 0.186633879778501 0.183912239946006 0.196967895094676 0.188274540535327 0.185660455982485 5 5 + 10610984 10611317 10611093.909 10610963 10611450 + gene protein_coding_gene TRUE TRUE AT5G28610.1 similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT5G28630.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001078769.1); similar to PREDICTED: hypothetical protein [Homo sapiens] (GB:XP_001129626.1) -0.0268951472203424 -0.260508849946810 0.799471278026776 1 0.0794640193755162 2.67143312021613 -0.0268951472203424 0.107437567786083 AT5G20680_at 5.36518633590867 5.54770911227492 6.27745501880349 6.74361615785196 6.96749849166197 6.73099311737095 5.85585826164899 6.12608429323443 5.29658359980554 5.24485524256629 6.08229517168476 6.07862482998271 6.44677947398134 6.43496515753675 6.35937295428084 6.49652989481296 6.49937703388973 6.03534453397361 5.22773954036499 0.2037018071146 0.2037018071146 0.208728650660046 0.204359649547493 0.208366297010138 0.206542432222844 0.208120958785960 0.203755568752862 0.209120769802876 0.212357121802687 0.207558492122868 0.204619282226224 0.2037018071146 0.207944944233341 0.217531068273676 0.205718729089343 0.227874459353881 0.206494310922474 0.212483419086325 5 5 + 7001032 7001549 7001333 6998105 7001912 + gene protein_coding_gene TRUE TRUE AT5G20680.1|AT5G20680.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64020.1); similar to Os11g0241900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067587.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA92327.1); contains InterPro domain Protein of unknown function DUF231, plant; (InterPro:IPR004253) -0.0267693310541943 -0.260099897292348 0.79977840227224 1 0.0793564336809188 11.9820770613511 -0.0267693310541943 0.106618762324422 AT5G02130_at 5.16836644595896 4.8300367321641 6.1155413527835 5.87443464233835 5.95405341463113 5.2090441272085 5.06173519361136 4.0415052154035 4.28194349347682 4.31638014815749 4.95252442866968 5.02281686810669 4.981572229652 4.98864401714902 4.76477781543891 5.17392178493244 5.67067217806577 4.43620161957577 4.16229474302664 0.221257078470172 0.223077779521587 0.224142556590225 0.21872668563168 0.221538656991719 0.223793654675101 0.214486196387403 0.221067912033124 0.214486196387403 0.218466415867561 0.226390801609946 0.215233776873687 0.214486196387403 0.223521090629601 0.225253465206614 0.218938290011570 0.214486196387403 0.235615691529731 0.216589874522329 5 5|0 -|/ 419756 420640 420129.3 419655 422015 - gene protein_coding_gene TRUE TRUE AT5G02130.1 NDP1 (RANDOM POTATO CDNA CLONE); binding mutant has Growth rate reduction, increased salt sensitivity; Putative Kinesin Light Chain similar to Os05g0457700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055740.1); similar to unknown [Medicago sativa] (GB:AAZ32868.1); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0421275356831234 -0.259684410658104 0.800090469935866 1 0.0792472997944564 9.90805505513864 -0.0421275356831234 0.230137165338748 AT5G43690_at 1.44798225166052 1.33542657187689 1.64939627728156 1.69031499858194 1.70397840423281 1.83095744914936 1.72546217238134 1.18594450910419 2.22526199321722 1.95754789800990 1.76267342527821 1.43129888040488 1.64586937167165 1.84908146306427 1.89460861894717 1.62852092180517 1.98610724703282 2.18605894667744 1.48562483521182 0.19545281168626 0.196886921087966 0.199137571067093 0.200160425083213 0.199607754292987 0.200207611038222 0.199040692516829 0.196248453037332 0.203205384139721 0.197939451347732 0.203498340993617 0.196720961794039 0.19946613425812 0.201735259580756 0.198777690326416 0.19545281168626 0.20091016133431 0.19722322401774 0.19545281168626 5 5 + 17563927 17564294 17564103 17563400 17564661 + gene protein_coding_gene TRUE TRUE AT5G43690.1 sulfotransferase family protein similar to sulfotransferase family protein [Arabidopsis thaliana] (TAIR:AT3G45070.1); similar to Sulfotransferase [Medicago truncatula] (GB:ABE89261.1); contains InterPro domain Sulfotransferase; (InterPro:IPR000863) -0.0257702910068389 -0.258539340296097 0.800950709683342 1 0.0789474204453522 3.41493563003683 -0.0257702910068389 0.0981307092402815 AT5G53300_at 13.2203315694760 13.3902552110625 13.7250844150090 13.8582905374804 13.7853423524808 13.6183675367651 13.1900380351954 13.4179296416216 13.7095864415428 13.3153206007631 13.9014830753318 13.7358042134889 14.0273202324696 13.9466029246870 13.6254615206205 13.8524076982849 13.4623848327682 13.9512890819976 13.5054705515027 0.067013514222265 0.0619999368644 0.067975225935741 0.0634060179549254 0.0601818868860184 0.0842891669470188 0.0670253606939855 0.06194433868344 0.0658626635971298 0.0700182976681128 0.0604942078887316 0.0616781264114148 0.0601818868860184 0.0683315801604843 0.0639608799622424 0.0625624010994666 0.0717171051658123 0.061195952244146 0.0601818868860184 5 0 / Inf -Inf NA 21649740 21651455 - gene protein_coding_gene TRUE FALSE AT5G53300.1|AT5G53300.2 UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase Encodes a ubiquitin conjugating enzyme. Identical to Ubiquitin-conjugating enzyme E2-17 kDa 10/12 (EC 6.3.2.19) (Ubiquitin- protein ligase 10/12) (Ubiquitin carrier protein 10/12) (UBC10) [Arabidopsis Thaliana] (GB:P35133;GB:P56617;GB:Q8LCR4); similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G27960.2); similar to ubiquitin-conjugating enzyme 8 [Capsicum annuum] (GB:AAR83891.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608) -0.0227217766559096 -0.258495597701991 0.800983577023273 1 0.0789359907422613 27.1871899434158 -0.0227217766559096 0.061533792303205 AT5G58570_at 8.4307182862091 8.42564479294818 9.77930591442765 9.92766572583594 9.95371149452668 9.69694643937716 9.08999752071116 9.13708139596964 8.25712511266283 8.38538132789724 8.29492502691865 7.73335297548594 8.95279309352164 8.91338278485023 7.11024587500956 8.39182356173255 8.90521110874663 8.500919194357 6.85499821557372 0.157126739721419 0.155101987826706 0.152573149905284 0.154587361395329 0.151457442827643 0.166433127431386 0.150996782304810 0.156434272408255 0.159115289433441 0.153602856446084 0.160086499052531 0.16392734951803 0.153719523883929 0.150996782304810 0.166546081707193 0.154392755451266 0.159988248885463 0.160568126888968 0.176498218803362 5 5 - 23690098 23690328 23690217 23689921 23690513 - gene protein_coding_gene TRUE TRUE AT5G58570.1 unknown protein -0.0220291079100068 -0.257549187390944 0.80169479031854 1 0.0786891660874369 17.3965505735619 -0.0220291079100068 0.0519687387639799 AT5G56310_at 1.03316224391776 1.11865314588021 0.97019360108856 1.09275220046534 1.28229506245847 1.08577618084184 1.23580335822040 0.892441543866552 0.668872508590989 1.17240862128439 1.27474145075568 1.34419655321580 0.965829481721152 0.913413184008855 0.997926393676477 0.72232128635069 1.52251539373680 1.10387358620274 1.30459387824221 0.188494468910895 0.190193571050874 0.189302710905601 0.18897611046089 0.185711485561219 0.194202600823245 0.185711485561219 0.190022884536613 0.193384871263263 0.191242390670071 0.190562540843794 0.185711485561219 0.193212934644993 0.187104257898424 0.195864303627882 0.185711485561219 0.195080058821549 0.200049343853125 0.202811240722469 5 5 + 22820547 22821063 22820729.909 22819542 22821601 + gene protein_coding_gene TRUE TRUE AT5G56310.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G20540.1); similar to Pentatricopeptide repeat [Medicago truncatula] (GB:ABE93365.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0234797798924181 -0.25741693123715 0.801794193886868 1 0.078654744699476 2.16599825154958 -0.0234797798924181 0.0731852062756015 AT5G40470_at 5.44354023216177 6.06965162392751 6.81237960952316 7.43964203773125 7.8368894134067 6.958903764658 6.0773180268801 6.01370535695843 4.64758605981696 5.16417676140677 5.51029085127384 5.61179910747685 5.92249404985389 5.79598948546981 5.11766245692688 6.46276850375908 6.17149290644461 5.68799470162505 5.21547200457779 0.257616003511385 0.246126346220689 0.259876476474554 0.247036935604558 0.25070252964286 0.263959178090536 0.249295560240665 0.247564332263447 0.260742697133259 0.251502558800134 0.249409240695867 0.245966344717534 0.245389262432936 0.252046806456021 0.244191393356351 0.246694134047521 0.263493882456833 0.249015320333412 0.250735637016681 5 5 - 16225485 16226033 16225835.545 16225237 16227125 - gene protein_coding_gene TRUE TRUE AT5G40470.1 similar to F-box family protein (FBL4) [Arabidopsis thaliana] (TAIR:AT4G15475.1); similar to Leucine Rich Repeat family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95013.1); contains InterPro domain Leucine-rich repeat 2; (InterPro:IPR013101) 0.0398304445791987 0.257314079976146 0.801871499317136 1 0.078627988376389 11.9785736497163 0.0398304445791987 0.216171460322884 AT5G51880_at 9.26342969763433 9.24760402053211 10.2511314489113 10.0269418505500 10.2361331889180 10.0386752417251 9.56161905649267 9.57477583431656 8.91552842400875 9.12168158279663 9.74363812772587 9.6050934768695 9.7132578030235 9.75301924703444 9.82344798778166 9.81096104793424 9.70224956108366 9.61996888541514 8.9184374032608 0.113599460906537 0.110158291965493 0.116653588669184 0.116691674906318 0.113447462035651 0.114404419461955 0.116432131111219 0.111894796343159 0.123302095768296 0.116899897104903 0.114381465690105 0.112793697253607 0.108882411329548 0.113183717612102 0.108882411329548 0.110860393477843 0.114110564297517 0.113200482613518 0.119113907309877 5 5 + 21107125 21107973 21107537.364 21106647 21108167 + gene protein_coding_gene TRUE TRUE AT5G51880.1 oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors similar to Unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO15289.1); similar to Os03g0119000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048776.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620) 0.0219607787716209 0.256851188047876 0.802219447326804 1 0.0785076995813734 19.1283739526170 0.0219607787716209 0.0518223365332798 AT5G15100_at 1.25068588461805 0.944894200693248 1.10042035213986 1.85482592650829 1.52358459255987 1.32355255807257 1.42410322193224 1.36296435086602 1.03819778607835 1.49107535941647 1.09689596181565 1.42220104967681 1.55699303838884 1.26025528862638 1.34420822217672 1.49113607739227 1.43396070631217 1.06361823447196 1.36975619910452 0.200309736964798 0.202318675881728 0.199075387905089 0.199194122667456 0.206706900914307 0.201471955977295 0.197092994702863 0.194934730260047 0.196728973215140 0.217546423620001 0.195424438298636 0.196086036343187 0.19859295940411 0.199503501226556 0.200538077759849 0.196138416940077 0.196380374247474 0.201867482311320 0.201630389344861 5 0|5 /|- 4892189 4892558 4892414.857 4892162 4893940 - gene protein_coding_gene TRUE TRUE AT5G15100.1 PIN8 (PIN-FORMED 8); auxin:hydrogen symporter/ transporter Identical to Putative auxin efflux carrier component 5 (AtPIN5) (PIN5) [Arabidopsis Thaliana] (GB:Q9LFP6); similar to PIN5 (PIN-FORMED 5), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT5G16530.1); similar to TPA: TPA_exp: auxin efflux carrier protein [Medicago truncatula] (GB:DAA05219.1); contains InterPro domain Auxin Efflux Carrier; (InterPro:IPR004776) 0.0305577949655305 0.255605091136897 0.803156340654734 1 0.0781849463413447 2.66479639620246 0.0305577949655305 0.145446973273151 AT5G03360_at 1.40389228243187 1.11536198898403 1.82774260627014 1.52012661059671 1.03531257156895 1.33624414069773 1.10036668079113 1.47951196592275 1.54115481877755 1.04986655143754 1.81623591333149 1.39530704102270 1.37374774075600 1.52444334322799 1.28839437361966 1.22461698985590 1.70833244705341 1.37281511790657 1.54060939400435 0.213531585435839 0.208799910335227 0.211712593532058 0.211338385423594 0.210925212459335 0.214712249175825 0.208181715515597 0.212142118741666 0.214474742551874 0.21442538830479 0.212269557152203 0.213456686813496 0.219439420798046 0.208256385066341 0.214522332774899 0.208411540377615 0.206527895802036 0.221142940892523 0.206880714453525 5 5|0 +|/ 824343 824786 824539 817953 825148 + gene protein_coding_gene TRUE TRUE AT5G03360.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G62030.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G26380.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G37210.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.0267432546196492 0.255433048255037 0.803285718756398 1 0.078140506974818 2.77241829370118 0.0267432546196492 0.111104367542575 AT5G65380_at 7.60545678378667 7.5669005255599 9.10564346629822 8.86060443859143 8.91219686202727 8.65755064368695 7.98051669751544 7.98837931470422 8.04882477883135 7.86394036192056 8.77966968677186 8.29018248971811 9.48350276722593 8.8361090431206 7.96322693136823 9.06614672733059 9.1768036173774 8.38451047063594 8.34284953346871 0.137276150831409 0.134647662618819 0.139310602401816 0.133702474150521 0.136089342799551 0.134569997974700 0.127639219759914 0.130067847047695 0.141566311913259 0.136280198100479 0.138182140762908 0.13191203604722 0.134373266730317 0.130681003104328 0.138476812123875 0.134668145033766 0.141270410738277 0.135624943070328 0.131100544234470 5 5|0 -|/ 26140651 26142307 26141205 26140215 26143665 - gene protein_coding_gene TRUE TRUE AT5G65380.1 ripening-responsive protein, putative similar to antiporter [Arabidopsis thaliana] (TAIR:AT5G10420.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G44050.1); similar to ripening regulated protein DDTFR18 [Lycopersicon esculentum] (GB:AAG49032.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) 0.0223596717288423 0.254375318812130 0.804081278458583 1 0.0778679400925196 16.7510180205715 0.0223596717288423 0.06153479950483 AT5G50260_at 1.21424378188904 1.21375501755584 1.67808886831654 1.58847414072297 1.50592676480917 1.18954000378264 1.16527334961994 1.24898671058008 1.11864863086055 2.03544785443699 1.40595602898379 1.10894746001814 1.33281725232848 1.61596943636937 1.57214502293547 1.13266439271040 1.76062113432064 1.64236507064956 1.57040996136759 0.210976638805472 0.212302196230802 0.217357069817231 0.208740972112059 0.213769254470240 0.216533597018229 0.212794504570323 0.209919729333704 0.219505335941054 0.20692441172896 0.207114263177419 0.215172039217605 0.213226143924477 0.215688100244366 0.211872684132637 0.20692441172896 0.218099118258814 0.214297800431663 0.20692441172896 5 5|0 +|/ 20473421 20474052 20473690.3 20472543 20474255 + gene protein_coding_gene TRUE TRUE AT5G50260.1 cysteine proteinase, putative similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT3G48350.1); similar to Vignain precursor (Cysteine endopeptidase) (GB:O65039); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) -0.02216688592965 -0.254295730606495 0.804141149294614 1 0.0778474761206944 2.86117168316512 -0.02216688592965 0.0587212872645881 AT5G44710_at 5.97226399718094 6.47215671674663 6.71501221979303 7.15359977668861 6.86230712030456 7.49786575840908 5.42100846235406 6.10053736429229 5.59467063121211 5.4372006756775 7.17262444232228 6.8149643029108 6.54682433594383 6.73987684985832 6.49928003649332 6.79871869385839 6.46509431799688 6.71682945382161 5.82972359608825 0.222579417317223 0.221295008192629 0.234283320930608 0.239928455637556 0.233550351965178 0.222455884497431 0.229520055302333 0.229378348634747 0.234292730855300 0.236019237840563 0.220870609500951 0.226002813685431 0.228259987031543 0.226784647810736 0.227455251413856 0.222933747610775 0.228453653129087 0.237645427689380 0.242256042893286 5 5 + 18058855 18059510 18059057.444 18058137 18059787 + gene protein_coding_gene TRUE TRUE AT5G44710.1 similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54919.1); similar to Os05g0148300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054647.1); contains InterPro domain Ribosomal protein S27, mitochondrial; (InterPro:IPR013219) 0.0369332541240617 0.25424109364722 0.804182251127962 1 0.0778334313512602 12.6942480212095 0.0369332541240617 0.197914780709454 AT5G27200_at 0.711166714691171 0.790004716621346 1.08874283020070 1.21013819963642 0.821194035952764 0.948989612195576 0.989770684355228 0.779369625366814 1.49818982138669 0.977703763859226 1.22978976969238 0.826914764350488 1.36716258591154 1.12925729324808 0.866250598171886 0.859984187265693 1.03302018768763 0.720542635983026 0.621553374183021 0.181463013667807 0.181463013667807 0.191333903745269 0.183480873240726 0.184512735738574 0.19030954667248 0.192738274847993 0.195383185172375 0.183953856085411 0.193532783379458 0.186973283852037 0.181463013667807 0.189539334887523 0.183373636779644 0.181463013667807 0.191955807812292 0.197789486266067 0.186029766057382 0.184911938879234 5 0|5 /|+ 9571488 9571954 9571702.556 9571188 9571992 + gene protein_coding_gene TRUE TRUE AT5G27200.1 ACP5 (ACYL CARRIER PROTEIN 5); acyl carrier encodes an acyl carrier protein similar to ACP1 (ACYL CARRIER PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT3G05020.1); similar to Acyl carrier protein SF2, chloroplast precursor (ACP) (GB:P07088); contains InterPro domain Acyl carrier protein-like; (InterPro:IPR009081); contains InterPro domain Phosphopantetheine attachment site; (InterPro:IPR006162); contains InterPro domain Acyl carrier protein (ACP); (InterPro:IPR003231); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) 0.0214897242394857 0.252937547263954 0.805163055972937 1 0.0774992300190235 1.93572083867675 0.0214897242394857 0.0494199342949071 AT5G28410_at 1.12649819641422 1.24628704238146 0.961856777393014 1.29823155018501 1.29628972397708 1.02228548075393 1.36902736664729 1.03918038017373 0.884405572976445 1.16447478782225 1.10474700977680 0.794736294974765 1.10462523105043 0.504596472386249 1.28465002720956 1.15374111494296 1.58918067390303 1.71651264292733 0.97771853674405 0.200888133006701 0.200955612997239 0.205763381045320 0.204118671384354 0.200888133006701 0.200888133006701 0.200888133006701 0.202914120441002 0.203944915307342 0.209588779943125 0.202168657096165 0.202889744844199 0.206225007442009 0.209895220809148 0.211333403440939 0.201890541681566 0.202867081556946 0.20402214774111 0.204610984734793 5 5|0 +|/ 10358381 10359266 10358848.571 10358377 10359442 + gene protein_coding_gene TRUE TRUE AT5G28410.1 unknown protein -0.0250350301600918 -0.252631190928442 0.805393613497671 1 0.0774209329270556 2.25268955602937 -0.0250350301600918 0.0965661639617517 AT5G63950_at 2.29419525705987 2.80418031547542 3.25888812051486 2.81903573414332 2.92701702710070 2.86137689359401 2.50995791608673 2.51833172197756 3.00826510656597 2.94885333250465 3.04928548654089 3.82364827267437 3.12714611899066 3.44985835272163 3.52214445947086 3.3174097401797 3.12167712068545 3.30982102458559 2.73574997057952 0.18795430660697 0.189850326020692 0.191947925990658 0.186929015057289 0.185771743199265 0.206183603900629 0.185097755633743 0.183900767405738 0.196376086768573 0.194507970049971 0.183832087535776 0.196051323977947 0.187938230439063 0.190444211585567 0.196356840902246 0.183595591290354 0.186018676964073 0.192598664598849 0.196482770896682 5 5|0 -|/ 25609527 25610310 25609986.333 25609182 25615731 - gene protein_coding_gene TRUE TRUE AT5G63950.1 CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase similar to CHR8 (chromatin remodeling 8), ATP binding / DNA binding / helicase [Arabidopsis thaliana] (TAIR:AT2G18760.1); similar to DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] (GB:CAL51622.1); similar to Os04g0692700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054371.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.0270294943930657 0.252276092297466 0.805660877770819 1 0.0773302957257568 5.86799618584299 0.0270294943930657 0.117107464197674 AT5G67010_at 1.21034100181211 1.22650134337327 1.53023627466995 1.32566219210955 1.2001797299103 0.815819753658608 0.974563628089367 1.16585856029704 1.68709932224355 1.6919878103059 1.30758776367962 1.73639083837078 1.80906551752692 1.60934952273361 1.12389579379919 1.54938081473525 1.35109349232932 1.73804168118630 1.03103168554205 0.217957117935021 0.213653338780732 0.218187768700057 0.213410634573604 0.206424408264451 0.208183939925958 0.203659240421222 0.212161701133166 0.210427864429461 0.206468881588682 0.212490015654461 0.212692040488301 0.210237606814606 0.208449727469378 0.217610949707078 0.204343318098862 0.211486317509647 0.208442289701905 0.208950240250863 5 5 - 26766295 26766737 26766525.818 26766284 26766842 - gene protein_coding_gene TRUE TRUE AT5G67010.1 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G20350.1); similar to Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] (GB:ABE80530.1); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) -0.0237016063401786 -0.251822479824862 0.80600232617744 1 0.0772146964218683 2.68021545252784 -0.0237016063401786 0.0823489403766522 AT5G19040_at 1.09858201693413 1.11809330834536 1.31926759506118 1.38716620581214 1.10627811195353 1.11713666576563 1.51788098010051 0.883327474598707 1.63425032244476 1.21860786403436 1.10818233045145 1.48378440820107 1.51592394854897 1.72149617661411 1.51139913291210 1.33910841801139 1.62171725634705 1.49610245834021 1.43433392599935 0.194494156811573 0.193658715784972 0.192486518747648 0.201947831838042 0.191167643202856 0.200205761781321 0.188698358165469 0.193414021876087 0.194830515534645 0.196884553624975 0.191174428761726 0.191082412613842 0.194171971584901 0.190000427860632 0.195968515046089 0.191765509425172 0.191747875739595 0.189938251445637 0.191711534207058 5 5 - 6362446 6362964 6362736.818 6361839 6363415 - gene protein_coding_gene TRUE TRUE AT5G19040.1 ATIPT5 (Arabidopsis thaliana isopentenyltransferase 5); transferase, transferring alkyl or aryl (other than methyl) groups Encodes cytokinin synthase. similar to ATIPT7 (Arabidopsis thaliana isopentenyltransferase 7), transferase, transferring alkyl or aryl (other than methyl) groups [Arabidopsis thaliana] (TAIR:AT3G23630.1); similar to isopentenyltransferase [Brassica rapa subsp. pekinensis] (GB:BAE43828.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Helix-turn-helix, Fis-type; (InterPro:IPR002197); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) -0.0262568775153425 -0.251362089528479 0.806348919859337 1 0.0770975798653387 2.64535569665696 -0.0262568775153425 0.110506883396496 AT5G19890_at 0.49013951698768 0.552929823665094 0.463606872016861 0.131358078000546 -0.0732570563894676 0.792405470559414 0.140726045140437 0.0843038581225554 0.641664602216017 0.208443223538986 0.448879320309175 0.683197797810294 0.84611094668546 0.214945580205398 0.86981831992281 0.296193581828719 0.677493912129938 0.331608031969237 0.347697486746523 0.218373848385297 0.209350478901413 0.206318392865061 0.206318392865061 0.213742220212462 0.213617542929842 0.208847626917031 0.216623412691446 0.209240981132991 0.217123779893877 0.212189826896886 0.207280931571255 0.213542473748948 0.208315420158599 0.213802127623403 0.207297272714911 0.215099521874367 0.213789860140326 0.209809184642414 5 5|0 -|/ 6724461 6724937 6724737.4 6724117 6725925 - gene protein_coding_gene TRUE TRUE AT5G19890.1 peroxidase, putative Identical to Peroxidase 59 precursor (EC 1.11.1.7) (Atperox P59) (Peroxidase N) (ATPN) (PER59) [Arabidopsis Thaliana] (GB:Q39034); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06730.1); similar to Peroxidase N precursor (Neutral peroxidase) (GB:Q42517); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.0318648113653809 0.251055819874222 0.806579511726963 1 0.0770197865428631 0.795426262941959 0.0318648113653809 0.161125598097605 AT5G36150_at 1.31746612331494 1.30075699861552 1.62061307767656 1.43157558984147 1.25796721042745 1.21726728834473 1.29611792187071 1.31170148536927 1.89023757563370 1.22491408717494 1.45838385053693 1.62346604851643 1.38131354510727 1.46483397918514 1.73499397766274 1.3572378259723 1.4261776989554 1.72453898310336 0.985401778755016 0.190970795645315 0.198848925980769 0.201752655019487 0.191262789354694 0.188635122420392 0.192170071750900 0.194375422024624 0.192412751283673 0.201942206545524 0.199838076006607 0.204346316158047 0.188731503045027 0.188507796719993 0.193050910292079 0.185612937066565 0.187481922493752 0.189509764059003 0.186185930983460 0.198058102589049 5 5 - 14238152 14238651 14238392.455 14238144 14242652 - gene protein_coding_gene TRUE TRUE AT5G36150.1 ATPEN3 (PUTATIVE PENTACYCLIC TRITERPENE SYNTHASE 3); catalytic/ lupeol synthase similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT4G15370.1); similar to pentacyclic triterpene synthase, putative [Arabidopsis thaliana] (TAIR:AT1G78500.1); similar to ATPEN1 (Arabidopsis thaliana pentacyclic triterpene synthase 1), catalytic/ lyase [Arabidopsis thaliana] (TAIR:AT4G15340.1); similar to beta-Amyrin Synthase [Panax (GB:BAA33722.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); similar to beta-Amyrin Synthase [Panax (GB:BAA33461.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpene synthase; (InterPro:IPR002365); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) 0.0205099336401389 0.250116624772041 0.807286756346487 1 0.0767818123368959 2.7882929048415 0.0205099336401389 0.033696235118537 AT5G05160_at 1.88714705461088 2.11905117097581 1.59477134984973 1.90397133857810 1.58819384979393 1.63490737403746 1.94601763642430 1.78796177399067 2.38677205725423 2.43298444586569 2.73626728743912 4.19986764852773 2.82802771081554 3.41637575742468 3.86854896521230 3.39149369222069 2.17041525635126 2.93118523518756 2.71087515700122 0.251784990705723 0.245026859430666 0.256482906040913 0.251516891044123 0.244546863451091 0.251468541484956 0.249428481441425 0.253694585494910 0.262225909596884 0.248582585535729 0.243760332857008 0.246998950669652 0.244513868621389 0.266011473432977 0.246315216263656 0.249113650387266 0.252273381914784 0.260837534845578 0.251182393933263 5 5 + 1529456 1529985 1529726.778 1527976 1530063 + gene protein_coding_gene TRUE TRUE AT5G05160.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G58300.1); similar to putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB62593.1); similar to Os05g0480400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055854.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.0226087849616778 -0.248256437796131 0.808688071011 1 0.0763130760498712 4.65924431729315 -0.0226087849616778 0.072713435004077 AT5G63410_at 8.58409842454236 8.90190323960501 9.42934138816008 9.34814994867332 9.82926216000162 9.48522887933373 8.79484308122877 8.57249337786766 8.9063649291836 8.5087026445107 9.61500841149113 9.64125212997924 9.35660355909843 9.28102337047168 9.0772130956259 9.37173524891078 9.03012327865024 9.41495486647836 8.60733310457007 0.148966522084356 0.139927609236078 0.146259296657458 0.150210878570921 0.136033219101173 0.150566744720675 0.136556446160939 0.13788150556758 0.159996359754464 0.148789838549296 0.140277154563831 0.134520030743771 0.143912230820865 0.13956512246106 0.154005054399090 0.134520030743771 0.143938597505363 0.140652100959025 0.137388130246618 5 5 - 25412418 25413323 25412773.455 25412210 25415379 - gene protein_coding_gene TRUE TRUE AT5G63410.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G14210.1); similar to Protein kinase [Medicago truncatula] (GB:ABE78913.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090) -0.0239687163219326 -0.247049700765844 0.809597506233954 1 0.0760108463948318 18.1294764646814 -0.0239687163219326 0.0908149983858614 AT5G61960_at 8.06869249593122 8.24631757993078 8.78308421489517 8.8251704983398 8.94383620648886 8.6118722590867 8.6428014416443 8.40455660408068 7.32109412667852 7.84432643973774 8.81849682001933 9.00350664051963 8.73796416448682 8.75572258532878 8.7260768956425 9.22426193330682 8.99040960452198 8.40940798922851 7.69094129801589 0.142820900911249 0.132180865333114 0.142390525625563 0.131453471197852 0.139572833509294 0.145959723990030 0.137995263446654 0.145088437174870 0.160669236433526 0.140435198411981 0.140955971736590 0.134881215357916 0.136766733237442 0.133944408610540 0.134620627504252 0.134273388235560 0.146342292085012 0.144060329040673 0.146396785254688 5 5|0 -|/ 24896275 24897262 24896593.667 24895746 24901941 - gene protein_coding_gene TRUE TRUE AT5G61960.1|AT5G61960.2 AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1); RNA binding A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices. similar to (ARABIDOPSIS MEI2-LIKE), RNA binding [Arabidopsis thaliana] (TAIR:AT5G07290.1); similar to AML1 [Lycopersicon esculentum] (GB:AAT39005.1); similar to putative AML1 [Oryza sativa (japonica cultivar-group)] (GB:BAD46727.1); similar to Mei2-like protein [Hordeum vulgare subsp. vulgare] (GB:AAL85701.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA recognition motif 2; (InterPro:IPR007201); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0228446317839828 -0.246878699494000 0.809726402106955 1 0.075968136454283 16.7918004711876 -0.0228446317839828 0.0774470550549456 AT5G27410_at 4.53598027894618 4.42956679248096 6.06577896021904 5.9160123948294 5.62917140022955 5.26610844110228 4.85195673199642 4.20021989229342 4.09792120746823 4.7927272165924 5.35714252470886 4.7952675599871 4.98274148739456 5.42395207829464 4.59856261687363 5.64847295510891 4.96338340262564 4.78222872232745 4.29232997760652 0.187695404003609 0.192679182978827 0.183226676793950 0.196532221704715 0.187527020724271 0.190171331748999 0.184835201790886 0.188673621013335 0.191965390429255 0.188901972632654 0.187685707970601 0.185679102407681 0.192896499555605 0.191478388326424 0.186412478810773 0.183911007481485 0.203159295315406 0.189830522835130 0.186866115766355 5 5|0 +|/ 9681183 9682420 9681832.222 9678669 9682943 + gene protein_coding_gene TRUE TRUE AT5G27410.1 aminotransferase class IV family protein Identical to Branched-chain-amino-acid aminotransferase-like protein 2 [Arabidopsis Thaliana] (GB:Q9ASR4); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT3G05190.1); similar to Aminotransferase, class IV [Medicago truncatula] (GB:ABE80609.1); similar to branched-chain amino acid aminotransferase-like protein [Cicer arietinum] (GB:CAD70620.1); similar to branched-chain amino acid aminotransferase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96064.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544) 0.028068887652321 0.246384789595542 0.810098730517142 1 0.0758449396346578 9.84349688766423 0.028068887652321 0.132962919323356 AT5G58782_at 0.722767596575946 0.972591140189912 0.823795509294138 1.23184935486670 0.517136247261771 0.868349889565421 0.541941013417152 0.762957437004407 0.706080491170379 0.507932662734392 0.401455209233145 0.327341612345701 0.151332057445269 0.765767339700031 0.348210832148827 0.328565292318729 0.704227735688579 0.647856202209805 0.340807382961167 0.221310705871753 0.221281521535432 0.223070717731216 0.222941034765181 0.223256821751215 0.223806588058498 0.221281521535432 0.222457076382480 0.221873961476452 0.229948094570863 0.230084924442501 0.233759559610438 0.225072684902819 0.222272228943997 0.225993780149671 0.226749401212043 0.225220544209192 0.228071974110207 0.227152567398232 5 5|0 -|/ 23755537 23756261 23755864.2 23755373 23756694 - gene protein_coding_gene TRUE TRUE AT5G58782.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative Identical to Dehydrodolichyl diphosphate synthase 4 (EC 2.5.1.-) (Dedol-PP synthase 4) [Arabidopsis Thaliana] (GB:Q8GY03;GB:Q8LFW9;GB:Q9LUY2); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58780.1); similar to Os01g0857200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044851.1); similar to Di-trans-poly-cis-decaprenylcistransferase [Anabaena variabilis ATCC 29413] (GB:YP_321433.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) -0.025608210288949 -0.246002171826500 0.810387196511313 1 0.0757496701285365 1.29398254723438 -0.025608210288949 0.109602368405278 AT5G24650_at 9.02830251873803 9.365231065887 10.0197045547233 10.0575261529868 10.4109002856009 9.89604164636175 9.8648275670265 9.6102729873986 8.91213835794047 9.25509635573477 9.93474181114867 9.95674148186729 9.85812741245987 9.74762950352165 10.1061820473311 9.94807174438458 9.5987098493199 9.8747487348836 8.97826435770814 0.0966539892483746 0.0966951773319195 0.0996564565877697 0.0977569243939851 0.096281424075229 0.103559775260240 0.096281424075229 0.0995632006694935 0.108481971707010 0.096307103853162 0.0983736092662554 0.096281424075229 0.100420918321242 0.107374970815768 0.0965723804655115 0.0969112257031959 0.102660938500333 0.100988238472349 0.101258030274194 5 5|0 +|/ 8437309 8438671 8437879 8437088 8439107 + gene protein_coding_gene TRUE TRUE AT5G24650.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] (TAIR:AT3G49560.1); similar to H0502B11.8 [Oryza sativa (indica cultivar-group)] (GB:CAH66528.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397); contains InterPro domain Sterile alpha motif SAM; (InterPro:IPR001660); contains InterPro domain Sterile alpha motif homology; (InterPro:IPR010993) 0.0260100085580621 0.244345016803512 0.811636911586775 1 0.0753387372110169 19.2449102291282 0.0260100085580621 0.115419647298233 AT5G55960_at 7.0473772632205 7.84134870907007 8.41729067722135 8.82822146317592 9.31703663535663 8.81296395953956 8.89455933813263 9.08543332442862 7.90961706048371 8.32503720937775 9.39771792853012 9.46879635388464 9.50057177492315 9.2064741865171 8.85349828764963 9.384859167261 8.82298678828061 9.43012270010681 8.26896890241894 0.241314802932328 0.209474287523542 0.207755590781581 0.210412617286982 0.209101787948592 0.208253728718788 0.211621315464296 0.212836711751033 0.237932748990328 0.205550958564893 0.214807093107233 0.208436130157919 0.202155577625406 0.213351214289838 0.214497276527574 0.207660138406090 0.222327185658357 0.221715507999311 0.200696235383156 5 5|0 +|/ 22681304 22681768 22681574.3 22679802 22682313 + gene protein_coding_gene TRUE TRUE AT5G55960.1 similar to Unknown protein [Medicago truncatula] (GB:ABE89316.1); similar to Os06g0297700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057438.1); contains domain TRANSMEMBRANE PROTEIN (PTHR21716) 0.0329161598953844 0.241139427817271 0.814055912003356 1 0.0745516207040477 17.2435303158453 0.0329161598953844 0.180655882967001 AT5G06780_at 5.86731636643296 5.913538708711 6.70895743822822 6.80576654030603 7.16455238683995 6.9464419280211 4.83217011962498 5.09845385157802 5.69622571208784 5.70836489092877 6.74042502615272 6.39896336369455 6.3877353093985 6.15562716237204 6.09775481237209 6.33469353755515 5.67357077842286 6.01238760768549 5.63211717876198 0.190432346305823 0.189326539036218 0.195288586974213 0.194069683848434 0.193434970925429 0.199207497320751 0.201433739908714 0.194144878240075 0.198723233650257 0.189326539036218 0.192094341684020 0.189326539036218 0.190849737821195 0.207051258381331 0.208850208164341 0.189326539036218 0.196891793853719 0.198108991501082 0.189326539036218 5 5|0 -|/ 2094148 2095696 2094567.8 2093927 2097130 - gene protein_coding_gene TRUE TRUE AT5G06780.1 emsy N terminus domain-containing protein / ENT domain-containing protein similar to emsy N terminus domain-containing protein / ENT domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G12140.2); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAL87186.1); similar to Os08g0328300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061559.1); similar to Os09g0279000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062755.1); contains InterPro domain ENT; (InterPro:IPR005491) -0.0212272778889790 -0.240866872758471 0.814261681684007 1 0.0744851699821776 12.1191733142842 -0.0212272778889790 0.0623927957909267 AT5G23650_at 0.70732893903784 0.968875572574382 0.994507750548408 1.15658955122175 0.848090210704577 1.12842804958561 1.01707099574904 0.795005214780548 1.00544786974914 1.04234188164121 1.11072475813719 1.06541084991266 0.776370479524545 1.05731081457003 0.912573017581756 0.921891524485143 0.924788847256279 1.07597172585767 0.854512334626646 0.185551885390811 0.186568699335959 0.188492923264076 0.184975490507087 0.18489172403538 0.190017197019764 0.183784934821705 0.185944508507288 0.186622581455645 0.188704124055127 0.192573693399389 0.186905488238948 0.184084224031321 0.184832439321962 0.189172209672844 0.184283967691061 0.191756673234599 0.185098276977162 0.185551371225873 5 5 + 7970431 7970957 7970740 7969815 7971022 + gene protein_coding_gene TRUE TRUE AT5G23650.1 myb family transcription factor similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G08520.1); similar to H0101F08.8 [Oryza sativa (indica cultivar-group)] (GB:CAJ86209.1); similar to Os04g0676700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054258.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class; (InterPro:IPR006447); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0226020027174947 0.240733796569855 0.814362154966043 1 0.0744527521143036 1.92601917594426 0.0226020027174947 0.0816443342021602 AT5G24130_at 1.96813951306724 1.86604094414154 2.49214815864918 2.05603474078932 1.92778476139866 2.09298132565433 1.74867973822746 1.87655159159233 2.03951850533086 2.10303602628075 1.99026077857511 2.05459164894228 1.92996000364646 2.07757296799148 2.23540462570388 1.92422934455890 2.57061929372979 2.42210696268249 1.94439910345114 0.246463193269329 0.246730873940964 0.255497654991432 0.253900868954787 0.252201186478448 0.263480320670097 0.251283091094518 0.24291252527905 0.244004547292465 0.259056132935711 0.241380264531565 0.241947842355453 0.245388083351556 0.248320426846598 0.241380264531565 0.248880912603122 0.252221675406696 0.249665568236072 0.250211526981263 5 5 + 8163213 8163773 8163483.273 8162216 8164069 + gene protein_coding_gene TRUE TRUE AT5G24130.1 similar to Os02g0257200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046472.1); similar to Os05g0586700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056464.1) 0.0228941510465250 0.240519763356662 0.814523758612528 1 0.0744006499468798 4.09333397081486 0.0228941510465250 0.0855282556791906 AT5G49620_at 1.62818518225554 1.54017075885882 1.78349511840066 1.47226785987171 1.57744140594453 1.49455439379004 1.44879272599281 1.20183495351115 1.77513860172894 1.77490285926885 2.05569684350080 1.52713514512869 1.86331694209555 1.91360337140883 1.7318192472567 1.54125449442979 1.97031267732022 1.75120504553837 1.62764178249749 0.180986447534564 0.178137222678572 0.180600570908208 0.185179653969255 0.186561852034135 0.178241644786726 0.177966586315788 0.184632093482523 0.189337766103978 0.182153374483073 0.180073422417243 0.182799514888710 0.189656231456628 0.177823765844256 0.183035131733680 0.186599383461513 0.178754827913836 0.179075996253686 0.182741872980556 5 5 - 20154729 20155226 20155005 20154620 20156610 - gene protein_coding_gene TRUE TRUE AT5G49620.1 AtMYB78 (myb domain protein 78); DNA binding / transcription factor Member of the R2R3 factor gene family. similar to MYB108 (BOTRYTIS-SUSCEPTIBLE1, myb domain protein 108), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06490.1); similar to Cpm5 [Craterostigma planta (GB:AAB58313.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0215768375188912 -0.237587749214004 0.816738455285403 1 0.0736915210571085 3.27843649249481 -0.0215768375188912 0.0718681962092848 AT5G51190_at 2.89670165144953 2.78760874647458 3.60242883344607 3.29354987028147 3.08517358785993 3.3824657563004 3.26887205203168 2.42652549064761 2.80911672815467 2.24438833843213 2.90555277191458 2.42090842387015 1.74790020053694 2.97403636818115 3.4063754179834 2.24553753480335 2.76363025400034 3.26029675375406 2.14699899199741 0.203358081841596 0.205220014592818 0.199931177698654 0.213879999971537 0.210157090623563 0.209036601269112 0.202709115585749 0.206022585820780 0.205308084824173 0.201043221868118 0.217264703380589 0.210357279453019 0.210363923467046 0.204015947485426 0.204511260429089 0.202114318769049 0.208722443724013 0.214593265924139 0.200092225501267 5 5 - 20817954 20818452 20818192.909 20817810 20818642 - gene protein_coding_gene TRUE TRUE AT5G51190.1 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. similar to ethylene-responsive element-binding family protein [Arabidopsis thaliana] (TAIR:AT5G61600.1); similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NtERF4) (GB:Q40478); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.0304353047199901 0.236625431335558 0.817465709206475 1 0.0734606516777725 5.65076461614069 0.0304353047199901 0.164651107972875 AT5G50910_at 0.238484591488746 0.385957512148566 0.800805586516812 0.896528002238519 0.653475883377471 0.618991813257065 0.324786442167355 0.864000573670512 0.66260234985597 0.903855936683664 0.360301329990195 0.229485273556897 0.861115147813413 0.746560581976529 0.724701516938106 1.35899516970774 0.780428627104902 0.303209659564126 1.13819695507424 0.225352939471874 0.223448408905323 0.223448408905323 0.233814761492732 0.229548582734349 0.232191017961221 0.226883636087117 0.224432163308166 0.236543184130839 0.230043844620663 0.234706591061072 0.224961490564663 0.234282289677377 0.224450721782408 0.232273941047670 0.230852240879652 0.229278091989826 0.228187518677213 0.228491866255103 5 5|0 -|/ 20725668 20726484 20726246.1 20725635 20726508 - gene protein_coding_gene TRUE TRUE AT5G50910.1 unknown protein -0.0234513846485557 -0.235100142517090 0.818618787135725 1 0.0730966181630642 1.38395450587619 -0.0234513846485557 0.0983297869668533 AT5G54370_at 1.26103300681850 1.12865184667177 1.37275354131564 1.31024550055144 0.988418621323052 1.04494751778383 1.12437180609281 1.09253368104627 1.64047993434018 1.30883197847615 1.15658978274330 1.31516732629811 1.07649808873719 1.63374759935995 1.73215954838232 1.53764578148603 1.61868125388704 1.84539976619632 1.19833204241085 0.228873698188285 0.244398498655064 0.236778804741331 0.228873698188285 0.24109916843103 0.23951900100046 0.236184775690664 0.229361650870876 0.230662552669517 0.233465467837993 0.234419548308791 0.235390475823411 0.234508261596413 0.237995730054371 0.236942134398558 0.235443141113765 0.245556959130050 0.245338752871887 0.237355759530899 5 5 + 22093067 22093756 22093487.364 22092509 22093990 + gene protein_coding_gene TRUE TRUE AT5G54370.1 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] (TAIR:AT4G27400.1); similar to unknown [Populus trichocarpa] (GB:ABG37646.1); contains InterPro domain Root cap; (InterPro:IPR009646) -0.0190693331485169 -0.234989115212098 0.818702738451034 1 0.073070210689513 2.60138650443142 -0.0190693331485169 0.0277110229379394 AT5G50000_at 8.96904418795202 8.78783641181871 8.99861941022835 8.90688031466184 9.58114072852602 9.42345666546982 8.7298677324013 8.31449985179139 8.90698283519458 8.93747220879564 10.2283197816370 10.2146242095595 10.0357355740623 9.91387779705948 10.1940901238355 9.94813510503556 9.45182426464327 9.9320720888509 9.37700531252482 0.108335096649178 0.103579863849704 0.110701544094110 0.110946673439377 0.106574594947224 0.107298723594087 0.108054419394195 0.106999822556615 0.109645661136222 0.115383379834440 0.103092882210581 0.102223585488951 0.102561633323848 0.101676623719796 0.103240608355541 0.102267796935260 0.106877881571743 0.106144819890522 0.105073842399165 5 5|0 -|/ 20360084 20360944 20360508.875 20359813 20362359 - gene protein_coding_gene TRUE TRUE AT5G50000.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G01490.1); similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] (GB:ABK06451.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.0220750477177718 -0.232732101950421 0.820409854303343 1 0.0725360620497863 18.4957456563181 -0.0220750477177718 0.0845398264651739 AT5G52800_at 1.08935646140009 1.20773279107770 1.43875234758588 1.88384357920584 0.914977036428913 1.18031683989323 1.26438625015578 1.04068324388412 1.1190793795506 1.03039576471087 1.28471507690369 1.52524846975573 1.49790848258987 0.905776303243368 0.874840694794188 0.68953050161461 1.93584539697104 0.857256935591068 1.42965245062685 0.298759960304502 0.289393109787813 0.297975918296910 0.300853070496103 0.289393109787813 0.306154088242014 0.289393109787813 0.289393109787813 0.309467247346618 0.329416229429013 0.301427516050363 0.289393109787813 0.289393109787813 0.293925725815372 0.295272469890168 0.295407567569438 0.289393109787813 0.31843098919489 0.299801087695241 5 5 + 21415719 21415974 21415852.2 21413170 21416106 + gene protein_coding_gene TRUE TRUE AT5G52800.1|AT5G52800.2 similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_001060721.1); similar to Os07g0467900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059594.1); similar to PREDICTED: hypothetical protein [Rattus norve (GB:XP_341434.3)|similar to Os07g0467900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059594.1); similar to PREDICTED: similar to Hypothetical MGC86034 [Danio rerio] (GB:XP_684501.1) 0.0233205734395878 0.232507187119233 0.820580024676396 1 0.0724831126811912 2.44722245086014 0.0233205734395878 0.0997983014246143 AT5G17430_at 0.84034597639702 0.783831477976814 0.98244289197847 0.848961128254744 0.750895675876506 1.16824279758836 0.729007144093641 0.835595861017077 0.925690453655169 1.09682678969727 0.782226515109797 0.829593987726483 0.813980212003209 1.25115490064121 1.01124764011135 0.899612493092988 1.46151448643022 1.12701060397659 0.96019762232409 0.190600995385741 0.190293186870364 0.191075485364583 0.191004291488504 0.197331663659566 0.191027022440816 0.193127871136550 0.191144888016439 0.200360340357254 0.193875701363217 0.193963554583572 0.195663806202240 0.190585828647016 0.195629176047385 0.189480316274849 0.193865425158064 0.196983751577752 0.195382144045971 0.189936561006104 5 5 - 5742594 5743113 5742824.636 5742544 5745570 - gene protein_coding_gene TRUE TRUE AT5G17430.1 ovule development protein, putative Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium. Identical to Protein BABY BOOM (AtBBM) (BBM) [Arabidopsis Thaliana] (GB:Q6PQQ4;GB:Q8LSN1;GB:Q9LF42); similar to AIL6 (AINTEGUMENTA-LIKE 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G10510.1); similar to Protein BABY BOOM 1 (BnBBM1) (GB:Q8L3U3); similar to Protein BABY BOOM 2 (BnBBM2) (GB:Q8LSN2); similar to Protein BABY BOOM (AtBBM) (GB:Q6PQQ4); contains InterPro domain Pathogenesis-related transcriptional factor and ERF; (InterPro:IPR001471) 0.0215205743537048 0.231611945251497 0.821257459891253 1 0.0722728570991009 1.87555581587049 0.0215205743537048 0.078649688262304 AT5G16470_at 10.6012607275089 10.7528464807129 11.2689211187538 11.4122454628156 11.4024590163677 11.3826191403188 10.4760474321112 10.7963596819075 10.6494917977551 10.6755642281514 11.2733363642118 11.2286951047107 11.1717378013737 11.1319896484301 11.0749573258499 11.2977629488323 10.9494277790734 11.1517153146118 10.6626634124956 0.0704396025527884 0.0646498069179573 0.0642270863962547 0.0646792397115586 0.0636234404257014 0.0658026175018309 0.0636234404257014 0.0643167181625952 0.0716194333780663 0.0662030600735778 0.0650352761562738 0.0640169082099167 0.0636234404257014 0.064721434446753 0.0666048291636021 0.0639176834270042 0.0743625960306159 0.0691459859312607 0.0670150534363496 5 5 + 5379542 5379786 5379658.182 5379419 5380043 + gene protein_coding_gene TRUE TRUE AT5G16470.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G02790.1); similar to hypothetical protein MtrDRAFT_AC148171g28v1 [Medicago truncatula] (GB:ABE89815.1) 0.0206424185348266 0.231459105919173 0.821373129689627 1 0.0722370415946405 21.9228578485724 0.0206424185348266 0.0662403130025447 AT5G61930_at 5.26974091949256 5.63019555987222 6.6233553957478 6.33143807665712 7.42458170293912 7.19235509737106 5.61783247312937 6.23229141492857 5.17217938740042 5.13143472606346 5.82314469384816 5.74997426008422 6.07490760134096 6.03327248607979 5.52966118764432 6.36155341271681 6.17527399912057 5.66544282281381 5.12010962842314 0.221765294789098 0.216276863301873 0.220259501854952 0.223719934260640 0.216105073122813 0.222868499599473 0.222150951853599 0.216900382727767 0.214005278340760 0.219627420084440 0.218377484056838 0.220705791473591 0.216687434015306 0.227423710631727 0.227429433465606 0.215311572442087 0.218049050554643 0.217867956957215 0.220493451176359 5 5 - 24883461 24884016 24883681.364 24883301 24885047 - gene protein_coding_gene TRUE TRUE AT5G61930.1 APO3 (ACCUMULATION OF PHOTOSYSTEM ONE 3) ACCUMULATION OF PHOTOSYSTEM ONE 3 Identical to APO protein 3, mitochondrial precursor (APO3) [Arabidopsis Thaliana] (GB:Q9FH50;GB:Q94JX7); similar to APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1) [Arabidopsis thaliana] (TAIR:AT1G64810.2); similar to Os07g0600300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060196.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC15509.1); contains InterPro domain Protein of unknown function DUF794, plant; (InterPro:IPR008512) -0.0269863519460669 -0.231271091552208 0.821515426294713 1 0.0721930154519364 11.8241713576431 -0.0269863519460669 0.139159221505629 AT5G02560_at 7.4853042235185 7.78472096451326 8.55182819952234 8.3629817633131 8.93488847294442 8.47534015177554 7.873132467936 8.3366006759058 7.41679111135797 7.68182512260812 8.66375398214231 8.69281839686981 8.79118664011014 8.97191228999165 8.64415062240143 8.99232184149984 8.82121675173163 8.6153267473354 7.91552310402417 0.142926907057327 0.151588057400600 0.14867580195303 0.143023946899471 0.146217318848141 0.159769908940444 0.148735134783277 0.145441864593989 0.163671569534221 0.150724930984915 0.142467384719438 0.148816458803840 0.140580130987576 0.141566321919101 0.144494617961178 0.142577453079368 0.151198806870071 0.146435146022849 0.143993386582606 5 5|0 +|/ 575528 576428 576071.222 575380 576604 + gene protein_coding_gene TRUE TRUE AT5G02560.1 histone H2A, putative Identical to Probable histone H2A.4 (HTA12) [Arabidopsis Thaliana] (GB:Q9LZ46); similar to histone H2A, putative [Arabidopsis thaliana] (TAIR:AT5G59870.1); similar to Histone H2A (GB:Q9M531); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.0258931499141972 0.231257256478839 0.821525897483999 1 0.0721897771777202 16.4483324590988 0.0258931499141972 0.128492452824982 AT5G55520_at 1.24959982253379 1.27448012076028 0.969954730859436 1.22375210370000 0.836193502310503 1.22587967574812 1.18600936127986 1.18764671302382 1.16414412103007 1.6586130476323 1.71179830072381 1.40686612149197 1.41583468574259 1.95332422192981 2.05698463636704 1.71206702875029 1.46894829302430 1.88782656563353 1.38870411900711 0.203010453739946 0.197373202137580 0.194083225005252 0.194516059909903 0.195264197346918 0.200200633053742 0.197164029079945 0.192595441150912 0.200652810331186 0.193652504111703 0.193095028083010 0.193981790542143 0.193618143082216 0.198823780935682 0.196622641959007 0.196609422140341 0.196487934091921 0.200132555656528 0.196338385581511 5 5|0 -|/ 22505431 22506013 22505777.3 22505300 22508492 - gene protein_coding_gene TRUE TRUE AT5G55520.1|AT5G55520.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26660.1); similar to kinesin related protein [Lycopersicon esculentum] (GB:AAO15358.1); contains InterPro domain Kinesin-related; (InterPro:IPR010544)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G26660.1); similar to kinesin related protein [Lycopersicon esculentum] (GB:AAO15358.1); contains InterPro domain S15/NS1, RNA-binding; (InterPro:IPR009068); contains InterPro domain Kinesin-related; (InterPro:IPR010544) -0.0215893245969075 -0.230792560884942 0.821877627353593 1 0.0720811206077656 2.69695283424252 -0.0215893245969075 0.0805940912892264 AT5G45180_at 1.22301921772926 1.25859357941844 1.36857140640959 1.49619099873291 1.14826334960309 1.02784787152357 1.31515785992035 1.24297928395588 0.751938131099727 1.39732739227941 1.00310502283331 1.22435399971150 1.18488994457724 1.17794959018496 1.31929318024121 1.01773386296269 0.6864414074307 1.48063160378574 0.916214215848542 0.20015411066563 0.203180567982803 0.203295649659511 0.200943816606665 0.198247623489543 0.200747251589145 0.202541681269127 0.200798863736070 0.206469980806379 0.207426358728952 0.204309029743233 0.19931537825321 0.210997116282317 0.198247623489543 0.202456438860463 0.198247623489543 0.205298013234139 0.203237697907535 0.200297016086807 5 5 - 18291443 18292363 18291901 18291406 18293795 - gene protein_coding_gene TRUE TRUE AT5G45180.1 flavin-containing monooxygenase family protein / FMO family protein Identical to Putative flavin-containing monooxygenase 2 (EC 1.14.13.-) (FMO2) [Arabidopsis Thaliana] (GB:Q9FKE7); similar to FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1), monooxygenase [Arabidopsis thaliana] (TAIR:AT1G19250.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN65447.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Amine oxidase; (InterPro:IPR002937) -0.0188807034676955 -0.230374761508899 0.822193896372342 1 0.0719836140436592 2.33939114901588 -0.0188807034676955 0.0334053463805530 AT5G21170_at 9.04683612714447 9.13640936920357 9.1629780073632 9.31743318087862 10.1977881228505 10.1624534886670 7.54557830546721 7.98266446333711 9.69783507424255 9.34735224753766 10.0160242300520 9.64995393214222 9.95117094006187 9.74029820551096 9.4380846495592 10.0416309549034 9.31450698917478 9.71134328659644 9.74647719103021 0.109189420219478 0.105641448400765 0.114155677937388 0.106054849199607 0.106346140577961 0.109791297905087 0.112596911941221 0.104151642739344 0.112146472226461 0.110245665984956 0.108578779189616 0.105292008417505 0.106122211903397 0.105001965669584 0.105770247348695 0.10372742628255 0.106202213751441 0.109625175380430 0.111243408080784 5 5 + 7207516 7208207 7207906.636 7205565 7208499 + gene protein_coding_gene TRUE TRUE AT5G21170.1|AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative|AMP-activated protein kinase Identical to SNF1-related protein kinase regulatory subunit beta-1 (AKIN beta1) (AKINB1) (KINB1) [Arabidopsis Thaliana] (GB:Q84VQ1;GB:Q9SCY6); similar to 5'-AMP-activated protein kinase beta-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT4G16360.1); similar to AKIN beta1 [Medicago truncatula] (GB:AAO61676.1); contains InterPro domain 5-AMP-activated protein kinase, beta subunit, complex-interacting region; (InterPro:IPR006828)|similar to 5'-AMP-activated protein kinase beta-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT4G16360.1); similar to AKIN beta1 [Medicago truncatula] (GB:AAO61676.1); contains InterPro domain 5-AMP-activated protein kinase, beta subunit, complex-interacting region; (InterPro:IPR006828) -0.0215295700431342 -0.229077106467432 0.823176416518336 1 0.0716818801709826 18.7340667094991 -0.0215295700431342 0.0819359671079216 AT5G52860_at 0.418746186314438 0.781584417153108 0.478209676072786 0.702953510861539 0.81248156006848 0.813421255227942 0.581601565298481 0.609479527307785 0.459852811151864 0.692613012112297 0.382709314101690 0.526876861033375 0.865681844967057 0.83929862637885 0.471661844227684 0.649994370508001 1.04932866329913 0.773920746133524 0.808377011976646 0.239013667861521 0.234915654359741 0.241833492890874 0.232090732509282 0.232682684259116 0.235286862493246 0.241354258986319 0.237191678914513 0.236807619772105 0.251982471911107 0.243524993857899 0.233545840998806 0.241049264934342 0.235922132778298 0.232755540582816 0.239018409313218 0.239674300441268 0.240127411001469 0.234788262962537 5 5 - 21437194 21437539 21437399.909 21437002 21438793 - gene protein_coding_gene TRUE TRUE AT5G52860.1 ABC transporter family protein Identical to Probable white-brown complex homolog protein 8 (WBC8) [Arabidopsis Thaliana] (GB:Q9FLX5); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT4G25750.1); similar to AAA ATPase [Medicago truncatula] (GB:ABE83068.1); contains InterPro domain ABC-2 type transporter; (InterPro:IPR013525); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.0209500189443717 0.229045295416153 0.823200506273281 1 0.0716745045652832 1.32408386841045 0.0209500189443717 0.0740179370769425 AT5G17250_at 2.99288359763341 2.87341475279938 3.30285827936687 3.04642206882669 4.2897516699013 3.46032570947949 3.67556949184089 2.84200821183508 3.38024769819649 2.71894056923045 3.68709853131881 3.75567516516852 4.1969483877572 4.01395838271592 3.90912262709014 3.62298316533564 3.1854742889328 4.13996709765482 3.09931603613563 0.253706078515578 0.256352915033163 0.261688595167777 0.254632215903827 0.255300435885052 0.275401413832586 0.253706078515578 0.263392420901962 0.260945783147375 0.258137936827820 0.258504243175299 0.253706078515578 0.253706078515578 0.254363856846501 0.260847392687687 0.253706078515578 0.264058231330833 0.255599789968933 0.25607400605991 5 5|0 -|/ 5669005 5669922 5669401.1 5668902 5673518 - gene protein_coding_gene TRUE TRUE AT5G17250.1 phosphatidylinositolglycan class O (PIG-O) family protein similar to transferase [Arabidopsis thaliana] (TAIR:AT2G22530.1); similar to phosphatidylinositolglycan class O, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB46881.2); similar to Os10g0170300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064233.1); contains domain Alkaline phosphatase-like (SSF53649); contains domain no description (G3D.3.40.1150.10); contains domain FAMILY NOT NAMED (PTHR23071); contains domain PHOSPHATIDYLINOSITOL GLYCAN (PTHR23071:SF2) 0.0345568245198842 0.228576592056026 0.823555466360752 1 0.0715659500222253 6.75044000117752 0.0345568245198842 0.209303457382498 AT5G62920_at 4.90220720488457 5.15864626958907 4.19027121634136 4.30045441054368 7.18181008586847 6.69836915870244 6.02970225354939 5.9616541671649 5.05435517934454 5.61997628352395 8.05541944423328 8.24267347317556 7.6715031495424 7.11678902230884 8.53138652470237 7.29550770135524 5.95689510192044 7.23084237901705 5.77864248387964 0.244597965277050 0.236559745174318 0.243232738079579 0.247065228005235 0.237124770844679 0.252082896311102 0.241926477956888 0.242914013178225 0.248796744319716 0.239294951095459 0.239626336122561 0.236559745174318 0.237241285481867 0.240944907962498 0.243826933135363 0.236559745174318 0.246098623656878 0.236559745174318 0.250961087514676 5 5 - 25269997 25271360 25270921.364 25269612 25271438 - gene protein_coding_gene TRUE TRUE AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Identical to Two-component response regulator ARR6 (ARR6) [Arabidopsis Thaliana] (GB:Q9ZWS6;GB:Q9ZWS8); similar to ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5), transcription regulator/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT3G48100.1); similar to Response regulator receiver [Medicago truncatula] (GB:ABE82371.1); contains InterPro domain CheY-like; (InterPro:IPR011006); contains InterPro domain Response regulator receiver; (InterPro:IPR001789) 0.0226950577988483 0.228377759021183 0.82370605981573 1 0.0715199655524822 12.0513652200545 0.0226950577988483 0.097318748816914 AT5G58160_at 2.00413161891453 2.32139005054082 2.67263855556001 2.4850157750591 2.99065114258607 2.72114987466505 2.64612036421711 2.91940096645482 2.83565138188399 3.03817474986144 3.34956254565272 3.60668513986291 2.78769573812270 3.56714677455947 2.91723336786685 3.32436049961944 2.89720222543547 3.34236249084404 2.46721012946031 0.217253079320016 0.232607192448325 0.224339851429849 0.226602402569315 0.217201169503068 0.214198753395519 0.215643617130506 0.217308926396487 0.227547742493894 0.223822217429786 0.213897002945075 0.213897002945075 0.213897002945075 0.22298672570798 0.217254870589967 0.218736973406091 0.226871189337481 0.221065014431962 0.215383337130854 5 5|0 +|/ 23555586 23556479 23556027.5 23551169 23556691 + gene protein_coding_gene TRUE TRUE AT5G58160.1 actin binding similar to actin binding [Arabidopsis thaliana] (TAIR:AT1G31810.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE94585.1); similar to Actin-binding FH2; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] (GB:ABE85432.1); similar to Unknown protein [Oryza sativa] (GB:AAL31655.1); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047); contains InterPro domain Actin-binding FH2; (InterPro:IPR003104) -0.0222134834027223 -0.227894666358461 0.82407197869297 1 0.0714084048359396 5.59725055257337 -0.0222134834027223 0.092088570837146 AT5G24550_at 0.735170341852577 1.26046875444013 1.30722482896708 1.83670886078803 1.25690440862477 1.05272558502892 1.20539661666771 1.21821639389155 0.983938708177369 1.57194495660362 1.02578693700763 1.31528262631638 1.20728219673852 1.31087468522712 0.83569102821593 1.26322608161855 1.41495491462139 1.33007551435156 1.21647340235870 0.190882873618787 0.187074579764082 0.191975306475909 0.191722817497922 0.189485829359380 0.188074914239357 0.189584539272834 0.194389175115034 0.194946973281855 0.208480502984036 0.192368904458020 0.187074579764082 0.193478242081876 0.189068304188252 0.187663024465095 0.189894139424237 0.192249834178172 0.193651471219319 0.190521587000665 5 5|0 -|/ 8392068 8393073 8392417.9 8392062 8395305 - gene protein_coding_gene TRUE TRUE AT5G24550.1 glycosyl hydrolase family 1 protein similar to DIN2 (DARK INDUCIBLE 2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G60140.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44460.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G24540.1); similar to Glycoside hydrolase, family 1 [Medicago truncatula] (GB:ABE85996.1); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) 0.0258794850588634 0.226396063043780 0.825207375631768 1 0.0710638194151556 2.46927652564528 0.0258794850588634 0.133840201870477 AT5G67380_at 8.19983261496824 8.3344439246782 8.75805305743859 9.06282654432217 9.3193380394599 9.41225808020095 7.98211101841995 8.08457394003279 8.57876825497155 8.04477504404446 9.1415930197665 8.95914470018378 9.04093482789719 8.98153694963003 8.99389060578915 9.12184766229809 9.22571668129662 9.1534781343379 8.55414362980351 0.146223624037516 0.144513315313722 0.151473420841103 0.151311135414003 0.157228175754218 0.154767822318699 0.146948040367966 0.145779984519899 0.156043314909301 0.166055724134961 0.149767216122695 0.143306928510252 0.148153003214973 0.145657775934676 0.146813827894835 0.144609242294726 0.144567846865347 0.146054297803904 0.157448685337311 5 0|5 /|- 26898570 26899484 26899090.6 26898192 26900656 - gene protein_coding_gene TRUE TRUE AT5G67380.1|AT5G67380.2 CKA1 (CASEIN KINASE ALPHA 1); kinase casein kinase II catalytic subunit alpha Identical to Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II) (CKA1) [Arabidopsis Thaliana] (GB:Q08467;GB:Q9FN14); similar to casein kinase II alpha chain, putative [Arabidopsis thaliana] (TAIR:AT2G23080.1); similar to CKA2 (casein kinase II alpha chain 2), kinase [Arabidopsis thaliana] (TAIR:AT3G50000.1); similar to casein kinase 2 catalytic subunit [Nicotiana tabacum] (GB:BAC02726.1); similar to protein kinase CK2 alpha subunit [Nicotiana tabacum] (GB:CAD26882.1); similar to protein kinase CK2 alpha chain [Nicotiana tabacum] (GB:CAD27342.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)|Identical to Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II) (CKA1) [Arabidopsis Thaliana] (GB:Q08467;GB:Q9FN14); similar to CKA2 (casein kinase II alpha chain 2), kinase [Arabidopsis thaliana] (TAIR:AT3G50000.1); similar to protein kinase CK2 alpha subunit [Nicotiana tabacum] (GB:CAD26882.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.0198881461898481 0.225646661661588 0.825775307221617 1 0.0708923476563461 17.3790947185683 0.0198881461898481 0.0624293032196037 AT5G23250_at 6.34908757592739 6.71861991520407 7.63615590752324 7.73061088751833 7.3278262735231 7.41881839024378 7.27192143489878 7.01914572699299 5.64153291960589 6.31371041927929 7.17614129116865 7.86915713961074 7.47654199481212 7.25687289337094 7.87687713154359 7.55764876014535 7.22554237958927 6.95546394399899 6.0471961434327 0.200946609359507 0.192611419892271 0.200601349641152 0.202517617524091 0.205267566495665 0.190987208671693 0.209277899466858 0.195005060410445 0.222501566124199 0.210309395073294 0.193180161532667 0.190987208671693 0.193931656300070 0.205704658066523 0.200615516058222 0.190987208671693 0.202324593429827 0.210713339645964 0.224456316874559 5 0|5 /|+ 7831300 7832449 7831929.4 7830363 7832846 + gene protein_coding_gene TRUE TRUE AT5G23250.1 succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative Identical to Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha-2) (SCS- alpha-2) [Arabidopsis Thaliana] (GB:Q8LAD2;GB:O82661;GB:P53586;GB:Q9FMX5); similar to succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative [Arabidopsis thaliana] (TAIR:AT5G08300.1); similar to succinyl-CoA ligase alpha 2 subunit [Lycopersicon esculentum] (GB:AAT67464.1); contains InterPro domain ATP-citrate lyase/succinyl-CoA ligase; (InterPro:IPR005811); contains InterPro domain CoA-binding; (InterPro:IPR003781); contains InterPro domain Succinyl-CoA ligase, alpha subunit; (InterPro:IPR005810) 0.0210056939220888 0.224443027856581 0.82668769631085 1 0.0706181199548766 13.8965701902552 0.0210056939220888 0.0807353362192339 AT5G06820_at 2.74171649021476 1.99884320620122 2.64433181731740 2.51039114337521 2.48577503849043 2.61563196510061 1.47526364393226 2.04716771916278 2.52722044788357 2.33809244411675 2.76818362129508 2.12235091565186 2.63456554170577 1.99439068253819 2.82341762283799 2.39335948717103 2.45318544411987 1.87164682454497 2.17180774982691 0.206926685032164 0.205086999090727 0.214382939437927 0.214866684684917 0.209201960028981 0.210555332679837 0.213797003247761 0.205086999090727 0.214634225258522 0.231875472378373 0.207700487899399 0.213110638778393 0.209885576478359 0.210613773857234 0.215006835363026 0.209852260868585 0.21208067587921 0.216404403143947 0.206258605402737 5 5|0 +|/ 2115887 2116597 2116307.3 2112870 2116755 + gene protein_coding_gene TRUE TRUE AT5G06820.1 leucine-rich repeat transmembrane protein kinase, putative similar to kinase [Arabidopsis thaliana] (TAIR:AT4G22130.1); similar to leucine-rich repeat transmembrane protein kinase 1 [Zea mays] (GB:AAC27894.1); similar to Os02g0190500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046150.1); similar to Os03g0183800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049184.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0286451489715943 0.222062575538293 0.828492937148447 1 0.0700800492194122 4.67906232702042 0.0286451489715943 0.165422328814569 AT5G38150_at 4.58806715112551 4.91078666086488 5.55538438638919 5.5554910784 6.71336212945032 5.87324887094719 5.84590463341896 5.32286269629242 5.13745216841508 4.92525343767786 6.30099331204204 6.34062698515668 6.03494933036778 6.26113310549946 5.6240265267214 7.36577305427113 5.75489896723386 5.70365440366607 4.96871491288801 0.253038464710996 0.262537068576003 0.261279660388939 0.259787534998890 0.252202026291003 0.265966475101928 0.267367735113512 0.258799434152356 0.253247560005336 0.265522316662183 0.252202026291003 0.256910657680312 0.259654091392654 0.267428688195674 0.257189350374584 0.253199723172369 0.275112685252498 0.263652791165803 0.260170696059029 5 5 - 15240351 15240841 15240563.455 15240346 15242165 - gene protein_coding_gene TRUE TRUE AT5G38150.1 PMI15 (plastid movement impaired 15) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G66840.1); similar to Os01g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043941.1); similar to myosin heavy chain-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82493.1); contains InterPro domain Protein of unknown function DUF827, plant; (InterPro:IPR008545) -0.0301214723384653 -0.221087178738355 0.829232940427935 1 0.0698612138540495 11.1375036843344 -0.0301214723384653 0.180135778196771 AT5G55240_at 1.23308859917486 0.978810995460493 1.09852286242066 1.21618817960510 0.783368647480139 1.24136143353994 0.84391706232081 1.38292418148114 1.32688886850883 1.34102729835835 1.3357224328386 1.58746172143485 1.16535901782370 1.28140179808041 1.00971644937977 1.25680415379865 1.66684594957907 1.90337475571524 1.13183869556608 0.223345991781935 0.223806307913979 0.230888165013086 0.224148287471123 0.223891339146227 0.221159593909678 0.228366311363589 0.227355626909595 0.224868768119174 0.234830727896145 0.229098902208665 0.222598002300919 0.221159593909678 0.222534490443429 0.232493058118973 0.224460649119484 0.226072522638532 0.223909029109895 0.224822148091176 5 5|0 +|/ 22423424 22424302 22423765.6 22423152 22424577 + gene protein_coding_gene TRUE TRUE AT5G55240.1 caleosin-related family protein / embryo-specific protein, putative similar to ATS1 (ARABIDOPSIS THALIANA SEED GENE 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G26740.1); similar to caleosin [Brassica napus] (GB:AAY40837.1); contains InterPro domain Caleosin related; (InterPro:IPR007736) -0.0250161949575985 -0.220702479620108 0.829524847562244 1 0.0697751668852822 2.43098311467325 -0.0250161949575985 0.131656764249357 AT5G45890_at 1.45206276610027 1.78919085585840 1.44663275698909 2.11100213042183 1.46782665948518 1.6676577561894 1.87719258141624 1.45385500679977 1.67798126564177 1.45641282489981 2.02596525492952 1.7640614202495 1.86604256185795 1.72510147464499 1.77900759561057 1.71567858427197 2.18126974137774 2.17660916200361 1.73859641463572 0.238734449619233 0.241462937780620 0.247395522626136 0.247298501163941 0.238734449619233 0.242802153943580 0.240255618991517 0.239284283782869 0.250734308024087 0.246524750583119 0.249071815504808 0.246195196360594 0.239395998418987 0.245863351563277 0.244218932717613 0.24256815619473 0.243763229777493 0.246664703163227 0.244473363954111 5 0|5 /|+ 18631265 18631952 18631590.6 18630486 18632157 + gene protein_coding_gene TRUE TRUE AT5G45890.1 SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. similar to cysteine proteinase, putative [Arabidopsis thaliana] (TAIR:AT2G27420.1); similar to SAG12 protein (GB:AAC49135.1); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Proteinase inhibitor I29, cathepsin propeptide; (InterPro:IPR013201); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668) 0.0270439364943396 0.220372366013033 0.829775357103 1 0.0697014475419905 3.42245113553785 0.0270439364943396 0.152267373797831 AT5G60520_at 2.03723053465199 1.73269824991652 2.47990172348100 2.43690951662015 2.04910048071187 2.23630372186552 1.79950183569610 1.23187785369751 2.04550106175447 2.36861131672952 1.85690337112422 1.63714894874333 1.83011184414430 2.10208593064167 1.48220646383330 1.85482276577737 2.03404651789975 2.36669123502661 1.91802676472673 0.192381641512728 0.182925939019501 0.183315586978551 0.197265200883302 0.178494202779516 0.179807151862091 0.185131889887063 0.182975042950718 0.183618500514403 0.181602254864022 0.188812135825187 0.180958289780706 0.18762448166762 0.182895537114019 0.184238548418437 0.178876707508981 0.186846463155176 0.188083536749959 0.182502513912173 5 5 - 24349041 24349530 24349321.8 24348896 24350271 - gene protein_coding_gene TRUE TRUE AT5G60520.1 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] (TAIR:AT5G60530.1); similar to Root cap [Medicago truncatula] (GB:ABE80069.1); contains InterPro domain Root cap; (InterPro:IPR009646) 0.0235125379622649 0.220114534219940 0.829971028781484 1 0.0696439458166874 4.00354808077294 0.0235125379622649 0.116324441090162 AT5G47890_at 9.28131108156308 9.56617311388242 9.9584694593233 10.1115471590512 10.3462393833650 9.87541347356937 9.37463252443485 9.62725694233642 9.34778056681447 9.64858379619706 10.5109233863118 10.5089789587736 10.3284229041335 10.3076428451820 10.1145815220747 10.3348640797834 10.0161885558705 10.0355844513045 9.69499993142118 0.136953222363975 0.129447052161897 0.133910940339521 0.129952883909007 0.127877909753283 0.139146400519613 0.128141838092279 0.128914308152155 0.134400477503605 0.128953696140629 0.136929080567524 0.132728470206525 0.127031142091699 0.136267664681166 0.126405310489548 0.134986443574890 0.134740397683491 0.133724275714323 0.128060995700411 5 5|0 +|/ 19406064 19407611 19406904.1 19405963 19407855 + gene protein_coding_gene TRUE TRUE AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative similar to Mitochondrial ribosome [Medicago truncatula] (GB:ABE92961.1); contains InterPro domain Mitochondrial ribosome; (InterPro:IPR007741) -0.0227764891719469 -0.220072900675583 0.830002626118795 1 0.0696346669417648 19.6843486102275 -0.0227764891719469 0.108083034665248 AT5G26620_at 1.84666470748097 1.38380224882287 1.73581695415175 1.71952742603581 1.56048584118554 1.64536433230809 1.33858390525993 1.50687123342636 1.49168341709208 1.28081738412800 1.41333366189582 1.34393823925875 1.39783529546685 1.94728499260117 1.60212514178722 1.79187517644865 1.5716137410998 1.72488839265524 1.90821086546258 0.183853085833340 0.182559513736681 0.181849008534874 0.180994561415037 0.180025311552724 0.178624080227546 0.185347046791352 0.184970136958698 0.193373772009777 0.190065131544908 0.190965998466104 0.185478837427497 0.187334034545561 0.182114046212086 0.178624080227546 0.188097141308657 0.186946565940779 0.185761684098582 0.188862168558431 5 0|5 /|- 9366728 9366890 9366824.1 9366700 9366966 - gene protein_coding_gene TRUE TRUE AT5G26620.1 unknown protein -0.0209706626584816 -0.219521909784739 0.830420824505438 1 0.0695120312265333 3.17181410727354 -0.0209706626584816 0.0865328673036505 AT5G55930_at 7.59421955940441 7.89987873872871 4.93302236181166 4.57790792578036 5.93413079929495 6.40172397978567 1.34073286334152 1.51026176612772 3.80136858668281 1.66042684333811 3.25588566094329 3.64447601432438 2.01135266731477 3.48464202638408 2.52637396104265 4.07714989509937 1.89154858588289 2.02174949477859 1.70637714728420 0.305808750485018 0.306906410072053 0.294991761255408 0.291463502673871 0.293498085230006 0.302428331361940 0.289493708056428 0.300434896749569 0.296362835890148 0.299528358095797 0.289493708056428 0.289493708056428 0.294999738387174 0.294984809330607 0.300400649478831 0.292747432252189 0.294913261933902 0.303019360342217 0.29818048298423 5 5 + 22672455 22673003 22672738.909 22669941 22673332 + gene protein_coding_gene TRUE TRUE AT5G55930.1 ATOPT1 (oligopeptide transporter 1); oligopeptide transporter oligopeptide transporter Identical to Oligopeptide transporter 1 (AtOPT1) (OPT1) [Arabidopsis Thaliana] (GB:Q9FG72); similar to ATOPT2 (oligopeptide transporter 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G09930.1); similar to ATOPT7 (oligopeptide transporter 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G10770.1); similar to ATOPT5 (oligopeptide transporter 5), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G26590.1); similar to Ribosomal protein S2; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93772.1); similar to Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93771.1); similar to Ribosomal protein S2; Oligopeptide transporter OPT superfamily [Medicago truncatula] (GB:ABE93773.1); contains InterPro domain Tetrapeptide transporter, OPT1/isp4; (InterPro:IPR004648); contains InterPro domain Oligopeptide transporter OPT superfamily; (InterPro:IPR004813) -0.0235989503263344 -0.219288276124508 0.83059816753258 1 0.0694601225871564 7.65075382294585 -0.0235989503263344 0.118250573916199 AT5G38790_at 1.83807479514178 1.75050610449549 1.96592848070391 1.93895013345089 1.62872726729005 1.60511749995524 2.17322810886446 1.78242945843373 1.75817077778105 1.57763781123586 1.96656837757769 1.93681819300008 1.97290298136994 2.16947365173363 2.0416478858221 1.84780571095733 2.44927036860013 2.01203789728875 1.74391798657385 0.180971901014240 0.182051935513165 0.179675502283113 0.181352434854039 0.179086835604914 0.177310552710351 0.184483908348309 0.181901801067841 0.185903440624753 0.18443231697906 0.183042129327048 0.180336014721982 0.181079412341434 0.177310552710351 0.179781100242248 0.184878761503644 0.177310552710351 0.180585229461094 0.185083194422066 5 5 + 15551031 15551230 15551129.091 15551015 15551410 + gene protein_coding_gene TRUE TRUE AT5G38790.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G30580.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD22254.1); similar to Os08g0486700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062097.1) -0.0197491299854485 -0.219091045634211 0.83074788591085 1 0.0694163446009124 3.70677414362059 -0.0197491299854485 0.0695837100897131 AT5G01280_at 1.48295366268333 1.43502827805269 1.57426034695264 1.65496318892253 1.29144316292397 1.66370618549942 0.971146006841222 0.817817250855921 1.80182739275993 1.37344051666716 1.57669310785090 1.26530371842838 1.59774632999530 1.17314673171961 1.25369211369914 1.52746611334484 1.75383864795157 1.52797223039358 1.59806672155018 0.178137403566674 0.176768552084273 0.176768552084273 0.188787327887353 0.187220178787683 0.183365618978540 0.197892327907083 0.176807533996708 0.187236474844436 0.182974217108005 0.181417260677375 0.179205063657039 0.182348731639620 0.185883977662996 0.180070891945171 0.177807922019999 0.180667288635705 0.185442193027189 0.179365570554199 5 5 - 114198 114850 114601.182 114010 116236 - gene protein_coding_gene TRUE TRUE AT5G01280.1 similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G09000.1); similar to Os01g0141900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041987.1); similar to putative proteophosphoglycan [Oryza sativa (japonica cultivar-group)] (GB:BAD61066.1) 0.0196533137250487 0.216640653821991 0.83260857313214 1 0.0688757003372109 2.88671171925747 0.0196533137250487 0.0715407345121896 AT5G56030_at 9.04859029500352 9.36513426513996 9.82113109883728 9.85252947097686 9.40529107111364 9.38273144683882 9.20317327112031 9.59837423221034 8.69265857800689 8.89263103290674 10.0207659090021 10.0793033337436 9.79805796542971 9.76563404442734 10.1735537448341 9.88718648169466 9.50938142583276 9.68273897475227 8.69644150727455 0.113694031084176 0.107346232908980 0.111555110669639 0.106384082705771 0.118868170937969 0.111414945095480 0.114358235088561 0.112685704213548 0.112858977805559 0.111160371202058 0.109355368509545 0.109772151894882 0.11109670787958 0.109579815093703 0.112306468884262 0.108097729415289 0.113189547244838 0.105003393516713 0.116154878065956 5 5 + 22706120 22706613 22706369.727 22704028 22706876 + gene protein_coding_gene TRUE TRUE AT5G56030.1 HSP81-2 (EARLY-RESPONSIVE TO DEHYDRATION 8); ATP binding a member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Identical to Heat shock protein 81-2 (HSP81-2) (HSP81-2) [Arabidopsis Thaliana] (GB:P55737); Identical to Heat shock protein 81-3 (HSP81-3) (HSP81.2) (HSP81-3) [Arabidopsis Thaliana] (GB:P51818;GB:O03985;GB:Q8VYT8;GB:Q94A60;GB:Q9FKU5); similar to heat shock protein 81-4 (HSP81-4) [Arabidopsis thaliana] (TAIR:AT5G56000.1); similar to HSP81-1 (HEAT SHOCK PROTEIN 81-1), ATP binding / unfolded protein binding [Arabidopsis thaliana] (TAIR:AT5G52640.1); similar to HSP81-3 (Heat shock protein 81-3), ATP binding [Arabidopsis thaliana] (TAIR:AT5G56010.1); similar to Heat shock cognate protein 80 (GB:P36181); similar to molecular chaperone Hsp90-2 [Nicotiana benthamiana] (GB:AAR12194.1); similar to molecular chaperone Hsp90-1 [Lycopersicon esculentum] (GB:AAR12195.1); contains InterPro domain Four-helical cytokine; (InterPro:IPR009079); contains InterPro domain Heat shock protein Hsp90; (InterPro:IPR001404); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) -0.0206218055033596 -0.214826947842868 0.833986491599798 1 0.0684794109346734 18.7721967810854 -0.0206218055033596 0.087880197949805 AT5G46200_at 1.51035674289946 1.24308121793143 1.59681883537029 1.51039781936898 1.46303930757343 1.33548167144200 1.3436082075574 1.46183150206081 1.80046254481682 1.43504464453242 1.70006466067798 1.64457385829074 1.70201875208576 1.65801284587453 1.57787403296740 1.65038277273869 1.65039015938829 1.86616417245975 1.31810350420682 0.197376115730222 0.192711965286209 0.186295396307573 0.187913064024663 0.185882880173550 0.187675162318399 0.184948060217718 0.186902245045009 0.195783032648773 0.186941399579615 0.196364817458664 0.186203172887809 0.184948060217718 0.184948060217718 0.196936151471053 0.187790453908931 0.185573670930788 0.186279228134778 0.190302354576511 5 5|0 -|/ 18745289 18746211 18745696.111 18745029 18747558 - gene protein_coding_gene TRUE TRUE AT5G46200.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17860.1); similar to Protein of unknown function DUF239, plant [Medicago truncatula] (GB:ABE93923.1); similar to Os07g0205500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059148.1); similar to Os07g0573400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060067.1); contains InterPro domain Protein of unknown function DUF239, plant; (InterPro:IPR004314) 0.0185647890094294 0.213929238899772 0.834668720664422 1 0.0682844853376138 3.03260460702335 0.0185647890094294 0.0571742062360997 AT5G06360_at 8.82569840969644 9.07076423124948 9.460954856714 9.50573104129368 9.96303010461494 9.7714179375246 8.71359301811422 8.91128898771598 6.80754318600809 8.03676231032939 8.69296847547933 8.89106714855461 8.85647862463717 8.20367147952445 8.732451922513 8.61722616603125 8.41596353483187 8.31975849317034 8.32502186051251 0.147542051850460 0.147187132793757 0.150902294302163 0.147245727247670 0.147344076957328 0.147087723889857 0.146849262090397 0.146642661215193 0.225194663588845 0.144538428489937 0.147275979577697 0.143248871912952 0.150654985010064 0.162387733475707 0.144535805014813 0.146278586532185 0.162867154972364 0.161140965383485 0.152416894454507 5 5|0 +|/ 1945432 1946325 1945942.6 1944769 1946744 + gene protein_coding_gene TRUE TRUE AT5G06360.1 ribosomal protein S8e family protein similar to Os07g0673100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060605.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL57977.1); contains InterPro domain Ribosomal protein S8E; (InterPro:IPR001047) 0.0189151333290221 0.213409696049138 0.835063621296838 1 0.068172042956186 17.4349634981368 0.0189151333290221 0.0642545890381942 AT5G16710_at 10.6295301110280 10.6409684127130 11.2134077317147 11.1061812960013 11.3384502723011 10.8537118592289 11.0768286371161 10.9353542643142 10.8336993556167 11.0356667942838 11.7845815389589 11.7716732692257 11.5378261996496 11.5277838347197 11.9747093663885 11.7294341677126 11.3530526510113 11.7850622152435 10.8097047321590 0.111479560750210 0.105069088443724 0.110366835871231 0.112183466995572 0.11012349897288 0.113774314039624 0.105622737572529 0.104906562696044 0.110885133180300 0.104906562696044 0.106549105553762 0.108547850729098 0.105361403163164 0.112308485959027 0.107969502747961 0.104906562696044 0.113758798766803 0.109311102682947 0.106650273447980 5 0|5 /|+ 5484090 5484860 5484445.444 5483291 5485084 + gene protein_coding_gene TRUE TRUE AT5G16710.1 DHAR3 (DEHYDROASCORBATE REDUCTASE 1); glutathione dehydrogenase (ascorbate) The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1); similar to dehydroascorbate reductase [Brassica oleracea] (GB:BAD14935.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, N-terminal; (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal-like; (InterPro:IPR010987); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.0205067856175567 -0.212491385868251 0.835761738641365 1 0.0679739597054164 22.2623235894106 -0.0205067856175567 0.0893563312536069 AT5G66760_at 8.76745540422221 8.8090619683302 9.66911241082433 9.67134083306023 9.29058823398626 9.05868428278825 8.87229524121709 8.90503561138405 8.33848424172115 8.66156998487155 9.4916456777651 9.61038741779353 9.40357884019359 9.45723565948932 9.45546363226031 9.44741160080385 9.13556112229518 9.32650235940087 8.49369759653066 0.129043979466979 0.124070666579359 0.130047224554635 0.130878713013643 0.125430705233198 0.129101730511996 0.126034573138056 0.131591729185079 0.144028021206857 0.128587728633628 0.127127331327740 0.128214828192622 0.127930969904277 0.127228292876922 0.127038851679206 0.127571432552026 0.132421466618258 0.129399197590769 0.132538368940042 5 5 + 26673489 26674406 26673959 26670884 26674762 + gene protein_coding_gene TRUE TRUE AT5G66760.1 SDH1-1 (Succinate dehydrogenase 1-1) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. Identical to Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit 1 of complex II) (SDH1-1) [Arabidopsis Thaliana] (GB:O82663); similar to SDH1-2 (Succinate dehydrogenase 1-2) [Arabidopsis thaliana] (TAIR:AT2G18450.1); similar to Succinate dehydrogenase, flavoprotein subunit (ISS) [Ostreococcus tauri] (GB:CAL56758.1); similar to succinate dehydrogenase flavoprotein subunit precursor [Cryptococcus neoformans var. neoformans JEC21] (GB:XP_572631.1); similar to hypothetical protein UM01172.1 [Ustilago maydis 521] (GB:XP_757319.1); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; (InterPro:IPR004112); contains InterPro domain Succinate dehydrogenase, flavoprotein subunit; (InterPro:IPR011281); contains InterPro domain Fumarate reductase/succinate dehydrogenase, FAD-binding site; (InterPro:IPR003952); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; (InterPro:IPR003953); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) -0.0176745937585610 -0.212229420023179 0.835960917442812 1 0.0679176077733043 18.0873920297889 -0.0176745937585610 0.0411664442360146 AT5G23220_at 1.07658539098398 0.523373179333175 0.88775749100326 1.17729410479623 0.881203481705786 0.918283137375522 0.847667322256773 0.829037792459873 0.955009114798999 0.646693671757917 0.829894863115812 0.678709361232824 0.652946581198574 0.421752502407785 0.609696071031152 0.365246309232752 0.806032782660025 1.03261265418015 0.655322367695869 0.198324912145492 0.199918439059024 0.19405557973331 0.196090631028550 0.194825208401856 0.196843635761777 0.192879514845673 0.196553225198278 0.192879514845673 0.208191413873816 0.195032918935663 0.196576878128361 0.202617814360893 0.193620668503299 0.196427850816507 0.196066886338239 0.201983968615423 0.206941129494075 0.194483522344724 5 5 - 7820073 7820579 7820302.636 7819819 7820679 - gene protein_coding_gene TRUE TRUE AT5G23220.1 isochorismatase hydrolase family protein similar to isochorismatase hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G23230.1); similar to isochorismatase hydrolase family protein [Musa acuminata] (GB:ABF70079.1); contains InterPro domain Isochorismatase hydrolase; (InterPro:IPR000868) -0.0218540907869672 -0.210990796241864 0.836902835479629 1 0.0676520981145504 1.60612679184765 -0.0218540907869672 0.108293670993340 AT5G43130_at 7.85004344204895 8.05113114534922 9.08780275887682 8.86941401257463 9.67344845419724 9.1840874629966 8.15986172063097 8.06690567962963 7.86749491592954 7.99923312144534 8.95329196159553 8.6338298047655 8.71561996081882 8.7567869335754 8.37933807623702 9.09685095904214 8.47203210971973 8.23913313481265 8.43805828554105 0.180421566547869 0.190601686576421 0.18029716623105 0.184196490259442 0.191778316604727 0.180610361776051 0.178557420797416 0.177639600375771 0.190546585814967 0.184704118442539 0.179317947517981 0.180179264033455 0.177639600375771 0.177639600375771 0.182096674231366 0.177639600375771 0.182738462493613 0.186161026805293 0.186927812273134 5 0|5 /|- 17332848 17333859 17333255.222 17332677 17338391 - gene protein_coding_gene TRUE TRUE AT5G43130.1 transcription initiation factor similar to transcription initiation factor [Arabidopsis thaliana] (TAIR:AT1G27720.1); similar to Transcription initiation factor TFIID component TAF4 family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96848.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription initiation factor TFIID component TAF4; (InterPro:IPR007900) 0.0211601698681156 0.210532658749784 0.83725129662932 1 0.0675542825920799 16.9965647388094 0.0211601698681156 0.100348565859100 AT5G18920_at 2.01052932355838 2.56484057883122 2.86156767840813 2.89422142853854 2.58789086002378 2.84551907380645 2.90198544854911 2.73241877510752 2.28414971764486 2.50829401272332 2.83474113405941 2.90750940643617 2.96593746862016 2.72530962437745 2.95581101495279 2.76995763057945 2.77820057341414 2.62989248642365 2.37462545683993 0.166160433819679 0.173004691815239 0.173008240363754 0.176236265407111 0.163973524657455 0.161999226561704 0.170298834619773 0.165071436906478 0.173383058963059 0.162646789164040 0.159884766813527 0.167521944032752 0.165499422376348 0.172590662543430 0.172265035234144 0.161506539296143 0.169564850154651 0.168165957874477 0.169771813828503 5 5|0 +|/ 6310104 6310584 6310231.444 6310066 6310848 + gene protein_coding_gene TRUE TRUE AT5G18920.1 similar to Os05g0404300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055502.1); contains InterPro domain CHCH; (InterPro:IPR010625) 0.0219074708531031 0.210195409750747 0.837507832937672 1 0.0674824122544312 5.27984313573319 0.0219074708531031 0.109920691895247 AT5G08440_at 4.62596175393781 4.66191758812543 5.83708327551642 5.90187475889134 6.50432851911312 5.54530590196632 5.44151415148941 5.15806173094555 3.93890666905124 4.28637204803048 4.74009785900927 4.98046918315731 5.39007483442899 5.18194404893244 4.85967084094351 5.08918918188817 4.68695581862063 4.98966171561038 3.94424943646447 0.214022287289730 0.21251516038938 0.225662570876883 0.216872459301826 0.218237057807806 0.216231112224761 0.220959987449607 0.21251516038938 0.225317468161793 0.218801142044224 0.215037690083082 0.214567101336444 0.218548419753188 0.220890302816328 0.220446988033315 0.214017486581860 0.216885325423414 0.221475595053619 0.21251516038938 5 5|0 +|/ 2723800 2724804 2724359.2 2720670 2727168 + gene protein_coding_gene TRUE TRUE AT5G08440.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23490.1); similar to Os05g0100900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054377.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98470.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF98471.1); contains domain RNA bacteriophage capsid protein (SSF55405) 0.0279181208099712 0.209967072364845 0.837681534345577 1 0.067433816645595 9.9826396199178 0.0279181208099712 0.173535124568630 AT5G46250_at 10.5366987748156 10.5330489858814 11.2822712202601 11.1718119105224 11.2284700770224 11.1944636350049 10.3690105860972 10.3357995634543 10.8149203612943 10.7631280851467 11.166853748998 11.0113814834787 11.1505465045073 11.1014470814048 10.9202378722293 11.0394700679449 11.2015610007082 11.3310656412488 10.6560515366434 0.0646155116877752 0.0620227236876931 0.0623910852348981 0.0643898838091406 0.0614484045825198 0.06297646682085 0.0599091471060853 0.0607766489990741 0.062058129097478 0.0615142301150929 0.059839089294398 0.0596058601610854 0.0606356769811689 0.0618659517847967 0.0613465663179964 0.0601524696771709 0.0637149909114701 0.0601841512757186 0.0628015858667233 5 0|5 /|+ 18774510 18775251 18775024.625 18772538 18775508 + gene protein_coding_gene TRUE TRUE AT5G46250.1|AT5G46250.2|AT5G46250.3 RNA recognition motif (RRM)-containing protein similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43970.1); similar to putative RNA-binding protein homolog [Oryza sativa (japonica cultivar-group)] (GB:BAD87502.1); contains InterPro domain RNA-binding protein Lupus La; (InterPro:IPR006630); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Lupus La protein; (InterPro:IPR002344); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0165680189014703 -0.206154271844086 0.840583351913663 1 0.0666300987749709 21.7614570538455 -0.0165680189014703 0.0208198427483068 AT5G43550_at 0.904084287779006 0.761121647051338 1.08471890970713 1.15521366442559 1.06434643946863 1.16648780826000 0.950509331291427 0.870151414281374 1.26458854243088 1.14427025647968 1.25124734698853 0.852606150133785 1.11040730689486 0.884356759664181 0.826513312099161 1.12979189437415 1.24555260464070 0.688840807294089 0.823671334457208 0.169138104147082 0.169138104147082 0.182428121674978 0.171462889661479 0.172711304164422 0.170493980216512 0.175454990406635 0.169499024916783 0.169205481711516 0.180162030386459 0.190431552068742 0.176403705270484 0.174322929748391 0.173251784728243 0.182769538170704 0.175728790158599 0.182171607858487 0.170165785867437 0.181549225553386 5 5 + 17515125 17515418 17515240.455 17515120 17515491 + gene protein_coding_gene TRUE TRUE AT5G43550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22791.1); contains InterPro domain F-box associated type 3; (InterPro:IPR013187) 0.0168392017375404 0.204598630509659 0.841768024710211 1 0.0663063721924873 2.03266647139161 0.0168392017375404 0.0355912827653557 AT5G54030_at 0.739144482341238 1.05037312897099 1.18938224650377 1.42227884880743 0.569756770871787 1.04555822355116 0.629569821267563 1.14650767441201 1.20662453261659 1.07475835175142 1.20742046417411 0.881870000174592 1.17645191255255 1.22485700876808 0.95593796901404 1.09195203300530 1.20807093699997 1.15999061782890 1.00385024003682 0.187224153834234 0.188316955501726 0.19006260923663 0.198679336736472 0.192368647366091 0.189229477296924 0.187267792296967 0.189146018496394 0.198081315459991 0.189443673059726 0.198145448191278 0.194476021613232 0.189835739804159 0.192343261181528 0.192827350143018 0.193326392964333 0.193178313856397 0.203693005296671 0.190372306796838 5 5 - 21943222 21943498 21943378.727 21943210 21944469 - gene protein_coding_gene TRUE TRUE AT5G54030.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54040.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain DC1; (InterPro:IPR004146) 0.0236179700344913 0.202565757088555 0.843316744891761 1 0.0658869991906637 2.07826968756556 0.0236179700344913 0.138952858825312 AT5G22940_at 2.15404233936373 1.99437332263707 2.51175181596784 2.17461426416515 1.70745053469031 2.44583867559541 2.04750023181839 1.94896211807658 2.24764318686243 1.83020603951323 2.14160501957378 2.09172183081511 1.72822160434341 2.05081947912749 2.53550211546420 1.93417794751165 2.72479477205557 2.10062562089406 1.95295772683622 0.194146067776931 0.198541869384687 0.194587657693846 0.201881329629616 0.19415759765751 0.202441017755105 0.199296802213485 0.198873576054296 0.195872177555272 0.201151604139016 0.197176919422587 0.198842742495958 0.194146067776931 0.212251092899965 0.204880701626627 0.194146067776931 0.198388404407595 0.198436560843174 0.201331608579100 5 5 + 7678217 7678797 7678562.636 7676941 7679182 + gene protein_coding_gene TRUE TRUE AT5G22940.1 exostosin family protein Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. similar to FRA8 (FRAGILE FIBER8), transferase [Arabidopsis thaliana] (TAIR:AT2G28110.1); similar to glycosyltransferase GT47C [Populus alba x Populus tremula] (GB:ABI64067.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) -0.0240805214800177 -0.202413855947924 0.84343249695746 1 0.0658558293916681 4.20991792935287 -0.0240805214800177 0.144174657151012 AT5G18140_at 8.54797948429563 8.61972653800973 9.2633296556992 9.3184943717004 9.97111208317372 9.80322774358594 8.7547753571664 8.37056798249456 9.39338207565985 9.0896655609128 9.94011351514125 9.5059302374552 9.58114736625998 9.68498921179556 9.6370868217061 9.96806427199872 9.83004485259798 9.87250999544489 9.2790993677462 0.138434045244338 0.132816509293454 0.137669691311176 0.135504098744190 0.133923515517988 0.132759269723730 0.135417147567306 0.136821905590890 0.140193848840943 0.128962855164549 0.132703006291729 0.132523953158112 0.134505590619361 0.137201651989055 0.130350207832299 0.134657011140133 0.132376926016280 0.132679280381330 0.132552379845330 5 5 + 5999163 5999616 5999417.545 5998177 5999890 + gene protein_coding_gene TRUE TRUE AT5G18140.1 DNAJ heat shock N-terminal domain-containing protein similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT3G17830.1); similar to Putative DNAJ protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05335.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.0183841415188157 0.200849821760107 0.844624551153233 1 0.0655362415090872 18.5844190447605 0.0183841415188157 0.07423041450708 AT5G10010_at 5.19634728736165 5.87391666018867 6.50734642679459 6.41981135541094 6.06492348444502 6.29614137202285 6.18596279329146 6.07070276230204 5.16024549911041 5.06383647485958 6.40665284846341 7.46401799304672 6.41029150179156 5.8961539018271 7.1625347829303 6.49808348544399 6.59392260862729 6.42929287982952 5.04416120251385 0.248836343375224 0.237519318144604 0.241962046276384 0.247990607760521 0.241264781986029 0.249040453228805 0.236326980019888 0.242619974950730 0.257219502817977 0.242388866983846 0.245585842058161 0.236326980019888 0.242620597054943 0.244335767057515 0.243316535686358 0.236326980019888 0.247909098817858 0.244666829851661 0.242770304926221 5 5|0 +|/ 3129774 3131403 3130900.714 3127907 3131728 + gene protein_coding_gene TRUE TRUE AT5G10010.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64910.1); similar to 117M18_4 [Brassica rapa] (GB:AAZ66923.1) -0.0222839336535472 -0.200640974026822 0.844783758835374 1 0.0654937525633987 11.9254105889303 -0.0222839336535472 0.126402096346489 AT5G39940_at 3.91955715287584 3.60044152137903 4.36815610508581 4.5165875982849 5.38948472289351 4.11023544154262 3.94812826247729 3.27395126206889 3.38870622474137 3.30051601330587 3.37443674672944 3.82499079759722 3.80427030900174 3.58314552767602 3.88902037546563 4.1867991342892 3.95302544159059 3.66071241820407 3.36969370160552 0.213165286949322 0.209435899695656 0.221146552046189 0.213104074418213 0.219715529334396 0.214312841857315 0.208902030929134 0.217515242134707 0.221567792743052 0.232642232374511 0.208902030929134 0.211856545052349 0.208902030929134 0.218461153344420 0.211916818285669 0.209717927397555 0.217666462369696 0.218379158471097 0.210569989371195 5 5|0 +|/ 16006508 16007694 16006866.5 16004781 16007929 + gene protein_coding_gene TRUE TRUE AT5G39940.1 oxidoreductase similar to putative carbon dioxide concentrating mechanism protein CcmK [Thermosynechococcus elongatus BP-1] (GB:NP_681937.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain HI0933-like protein; (InterPro:IPR004792) -0.035456082984647 -0.200183857038883 0.845132251177467 1 0.065400907584844 7.70957879517773 -0.035456082984647 0.257546974532005 AT5G57240_at 1.96123638634761 1.96818403922514 1.84299916015285 1.59989650455497 1.79869255313646 2.05362581542391 1.75172247670712 1.57070897961466 1.80136427048390 1.57514999172366 1.87283768690707 1.56526952420837 1.66561247660089 2.07126440562324 1.74621115594866 1.72404245259074 2.34856998871702 2.05520416966497 1.57350508291803 0.240971588120703 0.240548805582569 0.234475348490947 0.230454721156476 0.234088065302043 0.238294285845642 0.230454721156476 0.23637692383642 0.233276882956121 0.232891536184024 0.238141055050265 0.237716756773388 0.231580380122926 0.230454721156476 0.234606656301707 0.233878610333118 0.234555928838222 0.240253423027472 0.237028436317731 5 5 + 23211805 23212500 23212086.182 23210389 23212702 + gene protein_coding_gene TRUE TRUE AT5G57240.1|AT5G57240.2 oxysterol-binding family protein|oxysterol binding similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G25850.1); similar to Oxysterol-binding protein [Medicago truncatula] (GB:ABD28638.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648) -0.0179072221896917 -0.199321367154201 0.845789882353852 1 0.0652262994529538 3.58394970484925 -0.0179072221896917 0.0685488780143536 AT5G05500_at 0.890430951915172 0.341967565376962 0.481728977630501 0.665415377577254 0.847800717542068 0.53227682037449 0.439960386153827 0.435974945486683 0.781627029342637 0.361810026669006 0.613640879458078 0.765944904006451 0.790930866396273 0.716280421071332 1.04776027853818 0.771163066167187 0.474538057139547 0.344598310284357 0.81235936702509 0.174800271597868 0.175859738439498 0.178169575851965 0.175755172324030 0.176768126391614 0.179976553579439 0.175791378211262 0.178387133602568 0.193079919240949 0.183392795825069 0.175872747813087 0.179114563764833 0.183675071806858 0.178370862132073 0.174800271597868 0.178005837671147 0.179678981419573 0.180910519796965 0.179091689042329 5 5 + 1629758 1630188 1629984.182 1629668 1630397 + gene protein_coding_gene TRUE TRUE AT5G05500.1 pollen Ole e 1 allergen and extensin family protein similar to pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana] (TAIR:AT2G34700.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68108.1); contains InterPro domain Pollen Ole e 1 allergen and extensin; (InterPro:IPR006041) 0.0210062171318373 0.198401930796471 0.846491069825129 1 0.0650409863005644 1.25071408720458 0.0210062171318373 0.114022406460014 AT5G55100_at 7.78167738660776 7.14030852218269 8.52188806634559 8.26872919634424 8.3596272038395 8.02712541717054 6.58196195444836 5.9324268175336 7.65029124332997 7.6568164762757 8.18169483472012 8.12047098304517 7.62213418628232 8.14817264090427 8.01273001373807 8.38713170762423 8.28073196384177 8.39144280689262 7.88129009014253 0.144194501049359 0.152987433623760 0.154272985211626 0.146837741195071 0.145426134043330 0.150160801754931 0.159512217702915 0.160376670695694 0.155955565744081 0.142914505366119 0.150494170675204 0.151341472529121 0.151492005790649 0.151700324900405 0.142914505366119 0.142914505366119 0.153889030001035 0.154655453476537 0.153033679320311 5 5 - 22378629 22379146 22378886.182 22378328 22382006 - gene protein_coding_gene TRUE TRUE AT5G55100.1|AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to gene suppressor-of-white-apricot protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82206.1); similar to Os01g0698100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043973.1); contains InterPro domain SWAP/Surp; (InterPro:IPR000061) -0.0263293143967864 -0.197869984443784 0.846896810491775 1 0.0649341602219891 15.5129828599159 -0.0263293143967864 0.173736606260598 AT5G41770_at 6.17613848606343 6.48342273781172 7.27394062421168 7.47209068396076 7.58079266373776 6.81187191224391 6.68589716580359 6.55580334691485 4.82810093960659 5.45628421739706 6.22753188029153 6.88982368152995 6.32758275432877 6.71712733150798 6.4120454191306 7.02543795577934 6.58936530949318 6.19653542266495 5.65594091387374 0.224300481721593 0.220510259287889 0.227599134331101 0.219437066031774 0.222151455599093 0.232426847747182 0.214849134303170 0.214849134303170 0.23071307964806 0.219482606305865 0.219516155561174 0.215207685509316 0.225293627424216 0.228382878818456 0.221013648154274 0.217298055307856 0.220174677148578 0.217763219451966 0.223758144670071 5 5|0 +|/ 16737315 16737914 16737719.444 16735224 16738450 + gene protein_coding_gene TRUE TRUE AT5G41770.1 crooked neck protein, putative / cell cycle protein, putative similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT3G51110.1); similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT3G13210.1); similar to crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] (TAIR:AT5G45990.1); similar to hypothetical protein LOC393920 [Danio rerio] (GB:NP_957240.1); similar to PREDICTED: similar to crooked neck protein isoform 1 [Canis familiaris] (GB:XP_534328.2); similar to PREDICTED: similar to Crooked neck-like protein 1 (Crooked neck homolog) (hCrn) [Bos taurus] (GB:XP_604909.2); contains InterPro domain Tetratricopeptide region; (InterPro:IPR013026); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0239505440808903 -0.197581777891037 0.847116658733699 1 0.0648764010934567 12.8108063240768 -0.0239505440808903 0.149053277015797 AT5G22680_at 0.344191091717649 0.893588481930036 0.853270359970156 1.3122235662176 0.746759606094154 1.06762731256164 1.26585341773572 0.981316616416085 0.459652116728441 1.07695507142661 0.71814097534254 0.659246864472375 0.868544477437094 0.685794607316677 0.989505009669346 0.857298592633516 0.813872362868879 1.06833793249805 1.11027767851807 0.181253794451910 0.184406344744407 0.181517028861632 0.186601405398469 0.178386093133256 0.181438157818753 0.180691934971653 0.178829418343379 0.185173961039066 0.180957770472150 0.190933318826407 0.179700242019271 0.180818782760601 0.178386093133256 0.181503751492752 0.179760219794718 0.191325065039285 0.186850606854434 0.17926661071425 5 5 - 7540072 7540424 7540254.091 7540044 7540751 - gene protein_coding_gene TRUE TRUE AT5G22680.1 similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G22720.1); contains domain RNI-like (SSF52047) -0.0234935988353473 -0.197298143935275 0.847333032259954 1 0.0648196399041881 1.79054758574914 -0.0234935988353473 0.144414382831494 AT5G59120_at 1.33279616434715 1.23034037305254 1.56723753619986 1.74667944743657 1.35878394163419 1.57532436271522 1.37351273259613 1.35970167357505 1.56577431551681 1.59142682007121 1.57912014503613 1.68341202052091 1.96993266363698 1.68772753704172 1.74479718588219 1.80446323274842 1.97406145008370 1.97157185685886 2.16098410138781 0.182668073691635 0.187159617390048 0.184411170429723 0.19706737460634 0.194605030890951 0.188491043427291 0.181808662447357 0.188319465691107 0.201931344436936 0.192155700649297 0.181808662447357 0.183596670347898 0.186276698716161 0.182744767640578 0.192006955621983 0.183661953919289 0.182465549484078 0.185486212455129 0.192561211897401 5 0|5 /|- 23882169 23882632 23882339.7 23881956 23885278 - gene protein_coding_gene TRUE TRUE AT5G59120.1 subtilase family protein similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59090.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G58840.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT5G59130.1); similar to subtilisin-like protease C1 [Glycine max] (GB:AAN12272.1); similar to Peptidase S8 and S53, subtilisin, kexin, sedolisin; Protease-associated PA; Proteinase inhibitor, propeptide [Medicago truncatula] (GB:ABE86992.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.0168331255709809 0.196862953450293 0.847665048148471 1 0.0647327063234092 3.23035411584528 0.0168331255709809 0.0518520660122636 AT5G44300_at 2.17240810321336 1.96391364507300 2.37389919848002 2.28087005394248 1.71943172752881 2.34404553224689 1.80444494858331 1.90424332568725 2.06875161381257 2.13418343463861 2.51629953360683 2.32978309858118 2.61635356121906 2.70307731797815 2.16894680293310 2.08943519777312 2.11943471052101 2.62766233757058 2.30268007589814 0.17799484077267 0.184289175787386 0.178702349935049 0.176593151104326 0.178491513606698 0.182788406029454 0.180082991244010 0.191455819743369 0.174498135944344 0.177770619441012 0.176712565995014 0.182640214276547 0.177257257073646 0.179435363548023 0.181299824598836 0.177628884662457 0.185650747889131 0.182018271907931 0.172567249966616 5 5 - 17862602 17863361 17862963 17862393 17863424 - gene protein_coding_gene TRUE TRUE AT5G44300.1 dormancy/auxin associated family protein similar to dormancy/auxin associated family protein [Arabidopsis thaliana] (TAIR:AT2G33830.2); similar to auxin-repressed protein [Elaeagnus umbellata] (GB:AAC62104.2); contains InterPro domain Dormancyauxin associated; (InterPro:IPR008406) 0.0210133293786788 0.196679335007502 0.847805143793556 1 0.0646960838677282 4.35286328924738 0.0210133293786788 0.116375431235153 AT5G37970_at 1.38349020459849 0.994846431106114 1.15465509845238 1.89650680846232 0.600524338093472 1.26731975542356 0.85753187705023 0.914066605714374 0.999722368794951 1.07966083245829 1.08187351182805 0.674552257961702 1.22196464626970 1.15242619237664 0.647764292567525 1.22427459354534 1.16366603805572 1.25548970383386 1.06429928775809 0.217116170151263 0.204143507690266 0.205198251621085 0.221727936826755 0.204143507690266 0.204956293323574 0.211606138312872 0.213223508008383 0.208324752346834 0.208389662855683 0.204143507690266 0.215496562443097 0.206118262463338 0.20921192412149 0.210923322018123 0.204143507690266 0.2093403140009 0.207245900587174 0.208885649296680 5 5|0 -|/ 15140376 15140962 15140618.556 15140319 15141914 - gene protein_coding_gene TRUE TRUE AT5G37970.1 S-adenosyl-L-methionine:carboxyl methyltransferase family protein similar to S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT5G37990.1); similar to defense-related protein [Brassica carinata] (GB:AAK50345.1); contains InterPro domain SAM dependent carboxyl methyltransferase; (InterPro:IPR005299) 0.0271615155446867 0.195483875526548 0.848717380026001 1 0.064458480107227 2.18394042364191 0.0271615155446867 0.185515910944577 AT5G64720_at 0.0478452349554029 0.348196563280226 0.352409261045010 0.62402753715899 0.730114499186811 0.372016886481700 0.8683261592371 0.887231556718616 0.621505979455642 0.586551571792804 0.570320622665195 0.413308730065947 0.529603215567703 0.892921563191633 0.269111755052361 0.927491462849236 0.662835261446546 1.40699836081928 0.678914567902244 0.232056022469774 0.240706038166853 0.238658101801879 0.231715893092511 0.229193457636153 0.246230202476245 0.23827337660723 0.2319335348781 0.229193457636153 0.242971861525497 0.230869809330495 0.247578294962786 0.237767632285009 0.229193457636153 0.238959732432574 0.246869105246332 0.229193457636153 0.240512782071345 0.230939701100713 5 5 - 25889608 25889918 25889785.571 25889572 25889943 - gene protein_coding_gene TRUE TRUE AT5G64720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21740.1); similar to hypothetical protein LOC_Os12g06970 [Oryza sativa (japonica cultivar-group)] (GB:ABA95905.1); contains InterPro domain Protein of unknown function DUF1278; (InterPro:IPR010701) -0.0191486881723291 -0.195359744611990 0.84881211571328 1 0.0644338908218745 1.19780325117838 -0.0191486881723291 0.093606213488223 AT5G45830_at 2.18670529838751 2.30992995213108 2.57991185437785 2.43393397009117 3.75491974366150 3.64366297179521 3.78693451254069 3.19190992449293 2.29654088233059 3.18276544978391 3.93947778258099 3.18783476950341 3.79126517058214 3.88034739470916 2.91549352071970 2.64453609314581 3.03433593414535 3.0170762687398 2.65501953324772 0.216508325161311 0.214448908162318 0.216371232067712 0.214448908162318 0.229185332579858 0.215500660120073 0.223479595455792 0.215715836292644 0.221049857373202 0.215471482652272 0.217400775932335 0.214448908162318 0.228348087502889 0.217811298415518 0.218911999927880 0.214448908162318 0.228158922338646 0.214448908162318 0.215583271342887 5 5 - 18607480 18608310 18607849.545 18606709 18608627 - gene protein_coding_gene TRUE TRUE AT5G45830.1 DOG1 (DELAY OF GERMINATION 1) Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18660.1); similar to tumor-related protein [Nicotiana glauca x Nicotiana langsdorffii] (GB:BAA05470.1) -0.0203222348281402 -0.195039049913131 0.849056878849194 1 0.0643704356570842 5.99235743937801 -0.0203222348281402 0.109848986753706 AT5G39560_at 1.43685986198007 0.987502809913367 1.17177022162516 1.29005819773241 0.889128567260292 1.25161291449927 0.852004858642384 0.78060524107641 0.937447967705773 0.687025198668978 0.846675921836497 0.746802916907694 1.08374717536568 0.776142988738494 0.681540677169402 0.708680639737158 1.12360446534137 0.83913581255591 1.06723580715352 0.228250729561140 0.225646244016785 0.238695625974858 0.236325427914339 0.223987263941089 0.232678951171038 0.221489855586945 0.221390617119375 0.228020340255047 0.227267442854531 0.23139325748879 0.221104054652329 0.236411890390552 0.225377799231576 0.22726152683442 0.221884699671828 0.221104054652329 0.234686031553318 0.23909874213966 5 5 - 15859145 15859680 15859497.636 15858920 15860397 - gene protein_coding_gene TRUE TRUE AT5G39560.1 similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G19870.2); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain Kelch repeat; (InterPro:IPR006652) -0.0197512134395071 -0.194758351190021 0.849271129645295 1 0.0643149793125014 1.95645665869915 -0.0197512134395071 0.10273190291421 AT5G20390_at 1.29156744904903 0.654951984729838 1.07922317097933 1.21933990731603 1.15131024221287 1.2915900022271 0.690203866256495 0.79165373471674 1.56068591574285 1.02090470995021 0.91182455267964 1.10976606276418 1.29445348853682 1.21500227170313 0.902116203736293 1.17982422214407 1.61398656966054 1.53386330693331 1.72739989109830 0.206166292838004 0.203442786281681 0.210045394719654 0.2057958332297 0.208296210755141 0.200704365356275 0.212138301918388 0.202507664698861 0.205759071907736 0.201678207197745 0.201455521736142 0.199638359284534 0.205321242131427 0.200933085093678 0.211020468952579 0.207548638176081 0.202032790305783 0.214710561022688 0.213019169012116 5 5 - 6893070 6893551 6893405.909 6892833 6894197 - gene protein_coding_gene TRUE TRUE AT5G20390.1 beta-1,3-glucanase, putative similar to BETAG4 ("beta-1,3-glucanase 4"), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20330.1); similar to BG5 (BETA-1,3-GLUCANASE 5), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G20340.1); similar to beta-1,3-glucanase [Musa acuminata] (GB:AAF08679.1); similar to Os01g0801500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044540.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490) -0.0208299302472064 -0.194706484133205 0.84931071996026 1 0.0643047408544093 2.34944742320270 -0.0208299302472064 0.116716670999565 AT5G64360_at 5.19060317143425 5.48190237901329 6.62484251010042 5.95061833267151 6.35906095558217 5.81211001935879 4.61239801731056 4.71552702275688 4.81706487223958 4.60469021904954 5.5352405756604 5.51511938322385 5.53104814984642 5.93300083012214 5.51777723877396 5.58137005904915 5.83038584112429 5.62643480599528 5.04310332187113 0.204473204504612 0.201845112447329 0.208455328926086 0.212144361041649 0.215506297975187 0.213792976628153 0.207540275348831 0.218322651472413 0.21863021422646 0.205578390445921 0.205766279094317 0.201845112447329 0.204771484852410 0.210234835891687 0.204818662458917 0.217221492992134 0.208330201554346 0.209135508604787 0.201845112447329 5 5 - 25754459 25754994 25754716.636 25753566 25755893 - gene protein_coding_gene TRUE TRUE AT5G64360.1|AT5G64360.2|AT5G64360.3|AT5G64360.4 DNAJ heat shock N-terminal domain-containing protein|heat shock protein binding similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G09540.1); similar to Heat shock protein DnaJ, N-terminal [Medicago truncatula] (GB:ABE93084.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) 0.0245175943518902 0.194378899677438 0.849560776447826 1 0.064240138828781 10.8210910917924 0.0245175943518902 0.159475707266316 AT5G52830_at 3.68465023437191 4.17704000432049 5.81303039510552 6.14459286236761 4.70878269321444 5.24677775283863 4.18111535165704 4.61190220898133 3.4684760229705 4.17549846244133 3.56355402795065 3.75670468379425 4.05820342395944 3.84956357430563 2.76555618855878 5.07700428125445 4.93259942874678 4.91430990114343 3.56350926423718 0.236014446895859 0.239727416037804 0.237881830319066 0.241119849922927 0.234907253370373 0.235511184447490 0.236697047475098 0.234243302633074 0.236212450921510 0.239406345536107 0.231441692238685 0.236046287467845 0.234780408160608 0.235950077462946 0.237758654031828 0.231441692238685 0.234811173213347 0.235384815401626 0.232903854669120 5 5 + 21428788 21429392 21429128.455 21428078 21429566 + gene protein_coding_gene TRUE TRUE AT5G52830.1 WRKY27 (WRKY DNA-binding protein 27); transcription factor member of WRKY Transcription Factor; Group II-e Identical to Probable WRKY transcription factor 27 (WRKY DNA-binding protein 27) (WRKY27) [Arabidopsis Thaliana] (GB:Q9FLX8); similar to WRKY22 (WRKY DNA-binding protein 22), transcription factor [Arabidopsis thaliana] (TAIR:AT4G01250.1); similar to DNA-binding WRKY [Medicago truncatula] (GB:ABE83065.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) 0.0243245476788392 0.194363789657523 0.84957231086517 1 0.0642371616280027 8.74624386548904 0.0243245476788392 0.157412918986417 AT5G37090_at 0.75643335705148 0.956956659438988 1.24066928442194 1.29022564327377 0.623165726798961 1.15747053376097 0.70551400583492 1.00790420545065 0.924465711101776 0.979162520897401 1.18060111148402 0.809041887705888 1.13902507990880 0.764508046499246 1.04567095382220 0.934169830596123 1.03370677080509 0.65250386069652 1.08676286389694 0.202692390190878 0.196733422546078 0.204894849597621 0.197953364359923 0.200835556439890 0.196508399119654 0.196508399119654 0.198811613094138 0.202776116226591 0.209807361101362 0.203844948454567 0.201459081167327 0.202326639096595 0.207868955107940 0.204790281936560 0.198103682753866 0.201555216719219 0.207309333295971 0.201533673981893 5 5|0 +|/ 14680869 14681460 14681052.875 14680867 14681529 + gene protein_coding_gene TRUE TRUE AT5G37090.1 replication protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G05087.1); contains InterPro domain Nucleic acid-binding, OB-fold, subgroup; (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold; (InterPro:IPR008994) 0.0204080451327553 0.194182997762948 0.849710323419943 1 0.0642015571357396 1.93814266433151 0.0204080451327553 0.112097070115059 AT5G60920_at 9.82128792989404 10.1749862547014 10.1901589449345 10.2032287282342 10.5971427163104 10.7022312290484 10.4995516452023 10.6216284816086 10.3483894800699 10.6560405775141 12.0367958284494 11.6902207387599 11.6090525038918 11.6579306519227 11.7371087787186 11.3831112946636 11.2312557919885 11.5309299447532 10.5258067555180 0.092469782172417 0.0879962179221772 0.0884428170170212 0.0917845967469077 0.0879962179221772 0.0942089683654169 0.0879962179221772 0.0909708516592388 0.103036903437043 0.0887628172063635 0.0886435608206066 0.0892910104654813 0.0879992999641987 0.0879962179221772 0.0879962179221772 0.0879962179221772 0.0902347079143568 0.0902409784240923 0.0883778278381992 5 5|0 -|/ 24528736 24529443 24529096.1 24528422 24531355 - gene protein_coding_gene TRUE TRUE AT5G60920.1 COB (COBRA) Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. Identical to Protein COBRA precursor (Cell expansion protein) (COB) [Arabidopsis Thaliana] (GB:Q94KT8;GB:O81811;GB:Q8LDZ4); similar to COBL4/IRX6 (COBRA-LIKE4), hydrolase, hydrolyzing O-glycosyl compounds / polysaccharide binding [Arabidopsis thaliana] (TAIR:AT5G15630.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL3 [Arabidopsis thaliana] (TAIR:AT3G02210.1); similar to phytochelatin synthetase family protein / COBRA cell expansion protein COBL2 [Arabidopsis thaliana] (TAIR:AT3G29810.1); similar to COBRA-like 1 protein precursor (BRITTLE CULM1-like 6 protein) (GB:Q6Z4G8); similar to hypothetical protein [Cleome spinosa] (GB:ABD96927.1); similar to phytochelatin synthetase-like protein [Phaseolus vulgaris] (GB:AAR13304.1); contains InterPro domain Carbohydrate-binding; (InterPro:IPR008965); contains InterPro domain Phytochelatin synthetase-like conserved region; (InterPro:IPR006918) 0.0173206334764229 0.193565398295382 0.850181825096449 1 0.0640801773904327 21.4110918059138 0.0173206334764229 0.067295721902893 AT5G46660_at 0.732415903027445 0.98382713929791 1.16711036913461 1.12769834912986 0.763041167385036 1.19706111696112 1.15017780830677 1.14048756141613 1.05058404298913 0.85303114140231 1.24203781565020 0.837477552659844 1.29102901759507 0.96410277017674 0.846549120239828 0.968913955327576 1.4064747527847 1.20858428160655 1.05021156261747 0.198213150683313 0.198134736783077 0.203887254852490 0.210595464737298 0.198134736783077 0.210094212563168 0.205572594933184 0.205146208285075 0.198134736783077 0.204325889208508 0.205475802727655 0.207243419052275 0.204501962430331 0.205233974130573 0.201882858254518 0.200998486326724 0.204079310644336 0.200759620684066 0.202861150314368 5 5 + 18949763 18950274 18950026.182 18949408 18950325 + gene protein_coding_gene TRUE TRUE AT5G46660.1 CHP-rich zinc finger protein, putative similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424) 0.0185031347323005 0.193308834335561 0.850377715010843 1 0.0640298664808181 2.07285496379471 0.0185031347323005 0.0870841838189935 AT5G56170_at 8.1657302748517 8.29727115405183 8.97162848077448 8.94385968182 9.25935385948159 8.73385647315024 8.51137607993836 8.47689290117393 8.70975704041074 8.31878054089607 9.90522271025013 9.53158044233784 9.41553926805825 9.54957189633195 9.632133240526 9.26468294526334 8.96309929936118 9.34136648328035 8.49136835742445 0.107337449292797 0.108455847218547 0.113007731996135 0.106367370593809 0.107782693193618 0.118765669203053 0.109341439771022 0.107916414666640 0.115681789669806 0.111589517949362 0.106561885578816 0.110285160321174 0.108691276327995 0.111796828651364 0.106958281619397 0.110324170058389 0.116260111566521 0.110870775722666 0.110150621053675 5 5 + 22753298 22754227 22753983 22753141 22754531 + gene protein_coding_gene TRUE TRUE AT5G56170.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20700.1); similar to GPI-anchored protein [Vigna radiata] (GB:BAA34247.1) -0.0189660069129562 -0.193173918618009 0.850480729164893 1 0.0640034367527611 17.6485135374485 -0.0189660069129562 0.0940581473270504 AT5G10230_at 1.15549468858714 1.50890662689841 1.74810755884161 1.31832643658413 1.25392144024890 1.49755215114089 1.54479973516243 1.4374769705822 1.38068288259199 1.50033452713734 1.48687583059550 1.67425820699372 1.68433898341696 1.55445459466775 1.79655939484984 1.62536364252257 1.78544289216817 1.43413817226219 1.62737207523021 0.189290007039733 0.181262870539938 0.185660160463553 0.186019729478599 0.181840058632664 0.182858882414172 0.186975929938903 0.183416482871403 0.187412065596369 0.179569890295616 0.19079996230393 0.182969555523107 0.191827661267645 0.183132535541236 0.182666401633004 0.179569890295616 0.183707844435314 0.189054116520088 0.179569890295616 5 5|0 -|/ 3209789 3210488 3210119.3 3209541 3211424 - gene protein_coding_gene TRUE TRUE AT5G10230.1 ANN7 (ANN7, ANNEXIN ARABIDOPSIS 7); calcium ion binding / calcium-dependent phospholipid binding Encodes a calcium-binding protein annexin (AnnAt7). similar to ANN6 (ANN6, ANNEXIN ARABIDOPSIS 6), calcium ion binding / calcium-dependent phospholipid binding [Arabidopsis thaliana] (TAIR:AT5G10220.1); similar to 80A08_20 [Brassica rapa subsp. pekinensis] (GB:AAZ67605.1); contains InterPro domain Annexin; (InterPro:IPR001464); contains InterPro domain Annexin, type plant; (InterPro:IPR009118) -0.0197094774498792 -0.191411081469266 0.851827002146105 1 0.063659783428889 2.99956093084126 -0.0197094774498792 0.106746242715177 AT5G20710_at 1.34560841028018 0.87976657537273 1.24705571111730 1.43621949471951 1.21086141591444 0.95767547557191 0.838596133017833 0.996810733451459 1.50011462680961 0.948347120834132 1.27493600119888 1.20924346785310 1.17995504651651 1.60455672498425 1.42120790010594 1.28191300575407 0.91183178438432 1.34974500975759 1.39616095632424 0.164693188589420 0.163189684989729 0.167391787658817 0.166104561905281 0.163112455060593 0.162489150540426 0.165175915276017 0.173889854587441 0.168638086693967 0.174054519250901 0.171407417737146 0.164849348805434 0.175648612052886 0.164500631067477 0.164458379572209 0.163535480664105 0.161118552702175 0.166484013475987 0.176359028203914 5 5 + 7013380 7013924 7013674.636 7010524 7014251 + gene protein_coding_gene TRUE TRUE AT5G20710.1 BGAL7 (beta-galactosidase 7); beta-galactosidase similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to beta-galactosidase, putative / lactase, putative [Arabidopsis thaliana] (TAIR:AT1G31740.1); similar to BGAL8 (beta-glactosidase 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to Beta-galactosidase precursor (Lactase) (GB:P49676); similar to beta-galactosidase [Man (GB:CAJ09953.1); similar to D-galactoside/L-rhamnose binding SUEL lectin; Galactose-binding like [Medicago truncatula] (GB:ABE78217.1); contains InterPro domain Glycoside hydrolase, family 35; (InterPro:IPR001944); contains InterPro domain Galactose-binding like; (InterPro:IPR008979); contains InterPro domain D-galactoside/L-rhamnose binding SUEL lectin; (InterPro:IPR000922) 0.0192731045908062 0.191149722541067 0.852026643396174 1 0.0636090994317918 2.39443150312667 0.0192731045908062 0.101192822359416 AT5G16770_at 0.74638150026349 1.16981900368500 0.936503165520946 0.916484420425172 0.865077168742613 1.02843594904758 0.483723695636968 1.02747241385160 1.18025781672923 0.751671855465436 1.37900445360509 1.03803024944653 1.28830254224351 1.08118087622964 0.805860586334054 1.45446901348100 1.5348869749395 0.729505629008047 1.51949251620486 0.205885681302787 0.205711227479094 0.211714512368663 0.213250582722039 0.213153158351844 0.211436422746868 0.215797534852650 0.217514256070622 0.205044250817638 0.207193591368217 0.212430342438947 0.205044250817638 0.215388229500579 0.205044250817638 0.205664940913337 0.205044250817638 0.210784828181511 0.215657254179853 0.210921826767818 5 5 + 5516008 5516480 5516244.727 5514887 5516939 + gene protein_coding_gene TRUE TRUE AT5G16770.1|AT5G16770.2 AtMYB9 (myb domain protein 9); DNA binding / transcription factor|AtMYB9 (myb domain protein 9); DNA binding Member of the R2R3 factor gene family. similar to MYB107 (myb domain protein 107), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02940.1); similar to transcription factor MYB101 [Lotus japonicus] (GB:BAC75671.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0208595366980006 -0.190587719961695 0.852455970697667 1 0.0635003459925625 2.05392671637705 -0.0208595366980006 0.122618581369783 AT5G45960_at 0.171818926636670 0.206877071865116 0.279883017644473 1.12153462586487 0.828789634415145 0.526828256315411 1.07745463477366 1.00952498496285 0.845838434521503 1.15991652321179 1.01851534890239 1.68703564446542 0.9254374378957 1.01394550211905 1.22486519792649 0.984663263446138 0.825035232758332 0.974330723112767 0.967843083091754 0.203149998105066 0.203019567977180 0.210062173521052 0.205837922548706 0.21014079128896 0.208533563752169 0.203973833624920 0.207852543255072 0.218372625890538 0.207045191671831 0.207433015554309 0.213716126603328 0.210345468490778 0.206798053934282 0.203019567977180 0.213359623234297 0.211716020352377 0.203019567977180 0.210697515384929 5 5 - 18654403 18655198 18654835.273 18654250 18657588 - gene protein_coding_gene TRUE TRUE AT5G45960.1 GDSL-motif lipase/hydrolase family protein similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT1G06990.1); similar to putative family II extracellular lipase 3 (EXL3) [Oryza sativa (japonica cultivar-group)] (GB:BAD07804.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) 0.0234774510472942 0.189104480633854 0.853589293456394 1 0.0632148500976639 1.68930283944476 0.0234774510472942 0.155306472594921 AT5G56250_at 6.42306494405622 7.46963520018742 7.55948585080703 7.74605216388779 7.6618500105118 7.35759816890354 5.8906809037633 5.73004567394826 6.54232048212319 6.3247517126651 7.4681283273519 7.13014691633449 7.42956212320075 7.58166261042578 6.76343604417562 7.32605215910312 7.3339181217334 7.46922941164535 6.29877853411556 0.215743597413536 0.211399958488082 0.221452882185195 0.219919408275077 0.214892315704127 0.216343444235127 0.21964480608621 0.230649254711356 0.23593846397305 0.21809513779397 0.214242374134149 0.213297599343387 0.216113808347167 0.212200362986008 0.219860568143594 0.210064065286847 0.236232206549551 0.210064065286847 0.211617291505634 5 5 - 22786144 22786636 22786370.545 22785803 22790122 - gene protein_coding_gene TRUE TRUE AT5G56250.1|AT5G56250.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56240.1); similar to Os04g0471400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053056.1); similar to hypothetical protein MtrDRAFT_AC146329g11v1 [Medicago truncatula] (GB:ABE91348.1) 0.0269661155878103 0.188662691637674 0.853926925498865 1 0.0631302419758348 13.8304935514486 0.0269661155878103 0.193364032422431 AT5G01150_at 0.710228349383332 0.826759805402256 1.28847414888028 1.08922597939216 0.836172849091595 1.09363831757256 0.750093709578316 0.525131639548997 1.10206954744469 1.49776317423533 1.07228291422472 0.760454308329951 1.12958747887887 1.22705442747380 0.838563044126988 0.745724640323702 0.895196040406786 1.09040032157183 1.13820214581416 0.224886400160198 0.216928237444448 0.222995185298361 0.218802790192490 0.218196100186343 0.218265229356752 0.217168261364615 0.228321882103864 0.230499831578294 0.22445406235597 0.220507367670903 0.216262250432561 0.218356690171061 0.227930206808727 0.218312033901368 0.216262250432561 0.216262250432561 0.223946905469662 0.218967778811082 5 5 + 52978 53544 53231.091 51987 53648 + gene protein_coding_gene TRUE TRUE AT5G01150.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01140.1); similar to Os04g0594500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053728.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB44062.1); similar to OSIGBa0142I02-OSIGBa0101B20.29 [Oryza sativa (indica cultivar-group)] (GB:CAH67986.1); contains InterPro domain Protein of unknown function DUF674; (InterPro:IPR007750) -0.0170085152694240 -0.18758011234356 0.85475440362936 1 0.0629237451233682 1.99792535956376 -0.0170085152694240 0.0713891524485168 AT5G26760_at 7.48821918143406 8.08975975349296 8.6143736171816 8.72118841992621 8.92006022159003 8.80108671061747 7.9481229237707 7.85352690917145 6.855065079845 7.65404421864524 8.1354225537193 8.37507303390474 8.38418616127241 8.22950094446607 8.34289894600015 8.51462499535834 8.20754407096074 7.96576471864246 7.74214978217047 0.202646106458255 0.180008751892070 0.18611510056139 0.190989096573923 0.184129083297472 0.197918167375680 0.187259242066601 0.190383800396370 0.222130570206525 0.190403038686630 0.181908153727685 0.184656541376048 0.180249536587595 0.184680840140961 0.180008751892070 0.184519416166858 0.209450528437532 0.197973963711104 0.184911898120536 5 5 - 9403908 9404694 9404357.182 9403601 9407304 - gene protein_coding_gene TRUE TRUE AT5G26760.1|AT5G26760.2 similar to Os05g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054566.1)|similar to Os05g0134300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054566.1); similar to PREDICTED: similar to Chromosome 1 open reading frame 82 isoform 3 [Pan troglodytes] (GB:XP_513561.2); similar to PREDICTED: similar to Chromosome 1 open reading frame 82 isoform 2 [Pan troglodytes] (GB:XP_001153375.1); contains InterPro domain Protein of unknown function DUF408; (InterPro:IPR007308) -0.0194746863725448 -0.187547704449976 0.854779177692896 1 0.0629175816606114 16.1477738612784 -0.0194746863725448 0.10895073653101 AT5G06760_at 2.30819093807374 2.38166863757897 2.83069598426583 2.32740384233562 2.02025149040796 2.59207953265933 2.40964521849167 2.50510502845118 2.24439896190468 2.05852603446662 2.76988392321917 2.49816331158748 2.47219283120924 2.61315712964751 2.72767382569307 2.27489162412984 3.02887672809167 2.42355198603306 2.22346037107547 0.196462396060118 0.193966716671088 0.193310939393700 0.193566654860743 0.198673302285122 0.193210704267660 0.193756257441562 0.197335455334566 0.201273613374466 0.195520242818566 0.198054470372275 0.198472714285605 0.203613640085863 0.193210704267660 0.201212698623755 0.193210704267660 0.196665480031343 0.20254803002067 0.198505843784160 5 5 - 2089757 2090110 2089906.727 2089493 2090431 - gene protein_coding_gene TRUE TRUE AT5G06760.1 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT3G16460.2); similar to group 1 LEA protein [Sisymbrium irio] (GB:AAY26119.1); contains InterPro domain Late embryogenesis abundant (LEA) group 1; (InterPro:IPR005513) -0.0213961609683084 -0.187447226275428 0.854855988810177 1 0.0628984790410324 4.81013543858319 -0.0213961609683084 0.133465635531756 AT5G45570_at 0.90198471608994 0.709282748963323 0.94577672773753 0.647248741946259 0.906421248315448 0.981736358861971 0.634355560063592 0.715107522377909 0.81667707381174 1.12391888096085 0.989419487922082 0.955618035749143 1.25572235210945 0.836269505264065 0.61031398993937 0.933761643442583 1.51841250886768 0.985481680448071 1.01732387257616 0.169194602339828 0.169194602339828 0.174937285665451 0.169194602339828 0.170216099828080 0.173213675559932 0.169194602339828 0.169194602339828 0.179688191167154 0.178519560435884 0.175282387244056 0.17303387506842 0.176708110131947 0.176551471384617 0.176725879736800 0.173023096153787 0.176586750841451 0.177173183633169 0.177637138775471 5 5 + 18492393 18492737 18492663.4 18489528 18492801 + gene protein_coding_gene TRUE TRUE AT5G45570.1 Ulp1 protease family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G28810.1); similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT5G28235.1); similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT4G08430.1); similar to Ulp1 protease family protein [Brassica oleracea] (GB:ABD65034.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) 0.0165631429678757 0.186794653566048 0.855354890137162 1 0.0627746611905907 1.80353829116986 0.0165631429678757 0.0643908130838686 AT5G19680_at 7.8495424959917 8.05203955982218 8.73967764046186 8.86018705307303 8.9866952139978 8.70999472028873 7.93347646271609 7.99472430192608 7.5145144137168 7.00419488777348 8.41767050804538 8.26964704586709 8.09285077647027 8.2444804216416 8.09736295922933 8.10972173940429 8.32363377288513 8.22256060558923 7.42030049560548 0.150334023343745 0.137033908496007 0.136037601317461 0.134410781269176 0.139756429924164 0.136588718988830 0.136693382436156 0.139249943495596 0.139980031946997 0.156085638922658 0.137622936364363 0.134410781269176 0.140185359549753 0.139495281003664 0.148145918670207 0.134864392381532 0.135722015209933 0.141195631405513 0.142742360564297 5 5|0 +|/ 6650342 6651507 6650891.1 6649607 6651937 + gene protein_coding_gene TRUE TRUE AT5G19680.1 leucine-rich repeat family protein similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT3G15410.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE81262.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, SDS22; (InterPro:IPR007092) -0.0164371691297236 -0.185722506665471 0.856174705981862 1 0.062572165102341 16.1584143032047 -0.0164371691297236 0.0637823338093395 AT5G25630_at 9.58534011203046 9.7656483341902 10.7855622865129 10.5584126457342 10.7811137459464 10.5756826011248 10.0915613268211 9.89740504651912 10.0362823256604 10.2614522671962 10.6944486062623 10.3510708959569 10.3659032182146 10.7557395487491 10.0788996479003 10.8171846444679 10.6469400423357 10.4616228011983 10.0464851797802 0.123832432526068 0.118994405208992 0.118202408411964 0.117713712272917 0.118478148164108 0.121416154258515 0.123510674271784 0.122785097453541 0.144881866838386 0.117564566333379 0.114958591564981 0.115558353451938 0.116093049526541 0.115728546867223 0.123979531082340 0.11719789216225 0.120245172919133 0.126307568499606 0.125164317057582 5 5 + 8948885 8949400 8949179 8947374 8949602 + gene protein_coding_gene TRUE TRUE AT5G25630.1 pentatricopeptide (PPR) repeat-containing protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G21222.1); similar to leaf protein [Ipomoea nil] (GB:BAA25906.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0167298232186304 -0.185295269091981 0.856501442364813 1 0.062491795386213 20.5731988122839 -0.0167298232186304 0.0700832141801052 AT5G28420_at 0.495901289282813 0.657855373448145 0.94963846450075 0.965702547419876 0.680240790993726 1.15107675851925 0.902001065403414 0.68643969148115 0.813631114274205 1.13204897534292 0.746874288104973 0.333415360304142 0.611644816924577 0.587432980730129 0.946466464217428 0.738965260744772 1.3359665683656 0.616928896631198 0.792905945892118 0.191300428949904 0.191300428949904 0.191300428949904 0.198189348612172 0.191300428949904 0.199279641849337 0.193084307101211 0.191507030578634 0.198544402382527 0.202494719972942 0.197393549069138 0.19710369008553 0.191519953975134 0.196892804434503 0.199247252177501 0.194372537015940 0.194711131665183 0.19437279718768 0.200236976807527 5 5 + 10364841 10365262 10365017.364 10364838 10365293 + gene protein_coding_gene TRUE TRUE AT5G28420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44935.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885) -0.0181257784726166 -0.184699534059297 0.85695708681907 1 0.0623800356574478 1.63739391830077 -0.0181257784726166 0.0939354351538886 AT5G44390_at 2.66273950999138 2.72293913300080 2.65069269627692 2.70940785264267 2.15148458086635 2.17395102165224 2.26480975410994 2.38208101224137 3.09412451207884 2.68234730116562 3.49882144591121 4.23109218791717 3.2805840798001 3.70025285186308 3.65884596482624 3.52421785121329 3.1722299479461 3.58489949882897 2.5525237486596 0.214076626112109 0.212096569399100 0.212473637016957 0.216215708657537 0.212293018852184 0.213866134493324 0.217564448554235 0.222887018377275 0.221980016806617 0.225058186480376 0.221995181492250 0.234163899075849 0.219883747770714 0.218864941385016 0.219149382985606 0.216284008926990 0.219069611472703 0.220652322876759 0.221956591686979 5 5 - 17899559 17900115 17899889.273 17899423 17902231 - gene protein_coding_gene TRUE TRUE AT5G44390.1 FAD-binding domain-containing protein similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44380.1); similar to EDA28/MEE23 (embryo sac development arrest 28, maternal effect embryo arrest 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44400.1); similar to Berberine and berberine like, putative [Medicago truncatula] (GB:ABE90048.1); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) -0.0149047754091682 -0.184354444490631 0.857221051588028 1 0.0623154604345085 5.64361311135085 -0.0149047754091682 0.0252735379740522 AT5G16920_at -0.0561983821447288 -0.0922239816862956 0.0558734603337517 -0.0980812484359563 0.132315633477016 0.343557328324376 -0.0463347005947711 0.0404604926050082 0.396156751325434 0.366598496844968 0.334163634714611 0.443170189558798 -0.0868428291850859 0.166300233261413 0.475218286466662 0.694677216495918 0.105939019463527 -0.0699871398523004 0.253516059473665 0.25253238811511 0.245760302373513 0.244690162584916 0.245628119199799 0.242985714997745 0.245058473772424 0.249051697420193 0.245582132516847 0.250075227248643 0.248015942581426 0.246664956144802 0.244590725889763 0.247069277535327 0.243510889315217 0.249453110776576 0.245950445597604 0.250066050559284 0.253700815852358 0.249497596637112 5 5 + 5567258 5567803 5567552.091 5567014 5568131 + gene protein_coding_gene TRUE TRUE AT5G16920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26730.1); similar to Os12g0233900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066453.1); contains InterPro domain Beta-Ig-H3/fasciclin; (InterPro:IPR000782) -0.0155420879954084 -0.183566867326253 0.85782355107328 1 0.0621685335106518 0.333214539691533 -0.0155420879954084 0.0480694508102809 AT5G44750_at 5.63922944278309 5.3345246729962 6.77292628937454 6.42042226678274 7.7771130425417 6.41854420909571 5.84712713516394 4.85626816849287 4.90752607680385 5.16232608433186 5.6051624828428 5.91162690686264 6.57838818932233 6.16268630469681 5.57885141316785 6.80241387986018 6.43983941168973 6.45948212501841 6.39994638518202 0.255538277161722 0.256167043134646 0.266329835604793 0.266889466983780 0.258376818391193 0.256759030516048 0.25245959383236 0.256882249630646 0.270639505566799 0.261234274334427 0.264182991992254 0.251532659823562 0.253144731983719 0.256157260951229 0.260897303705004 0.254107285632335 0.251532659823562 0.251532659823562 0.251532659823562 5 5 + 18075954 18077016 18076288.444 18069835 18077396 + gene protein_coding_gene TRUE TRUE AT5G44750.1 REV1 (Reversionless 1); damaged DNA binding / magnesium ion binding / nucleotidyltransferase Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49980.1); similar to PREDICTED: REV1-like isoform 3 [Pan troglodytes] (GB:XP_001160264.1); similar to Os06g0691000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058419.1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain UMUC-like DNA-repair protein; (InterPro:IPR001126); contains InterPro domain DNA repair protein, Rev1; (InterPro:IPR012112) 0.036717006653487 0.181854846677807 0.859133580618756 1 0.061851301706572 11.9743889973814 0.036717006653487 0.301960050008998 AT5G44580_at 11.1513829843734 11.5397600923086 11.6807602126840 11.9730524676003 11.8448680561926 11.4227228680985 10.7352192980328 11.0232309532369 11.6785925803458 11.2415450893692 11.7600874202561 11.8403620769059 11.6882096491330 11.9846030564488 11.6098715438577 12.1774765115011 11.7759024699628 12.0146400408082 11.1519841345567 0.107966295314785 0.101263105275772 0.104402981552752 0.102571628003351 0.102485490987741 0.115457654898859 0.107346316936559 0.105100001218459 0.104072662088413 0.10515359276058 0.101505338593706 0.101819324168039 0.101263105275772 0.101751576358864 0.101263105275772 0.101263105275772 0.110752759420974 0.101319949053084 0.108460367828894 5 5|0 +|/ 17996585 17997367 17996921.778 17996538 17997638 + gene protein_coding_gene TRUE TRUE AT5G44580.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G44582.1) 0.0198599284980965 0.181852040352173 0.859135728371437 1 0.0618507841275288 23.0282586319991 0.0198599284980965 0.122053089505297 AT5G55480_at 3.26045089738499 3.38465505180184 2.66839993197928 2.51049940223616 3.00739633390568 3.50451383491652 3.50434291558937 4.15531895800891 4.22591886910984 3.756689581544 7.0976060250374 7.71824060661272 6.22478075991976 5.58363701129573 7.5198642429325 6.0488806938695 4.69514713711279 6.07152441616099 4.26648084840195 0.236926536116864 0.235917671372912 0.237370992609555 0.236000122390825 0.229883140324128 0.229946109632547 0.229883140324128 0.231448177906201 0.231397614767477 0.23184793449711 0.237109045953766 0.232883657257769 0.235218555413175 0.243006171770355 0.233909529905591 0.233380291845016 0.23605465156883 0.244255844707810 0.233559172636622 5 5|0 +|/ 22494363 22494964 22494690.7 22491456 22495358 + gene protein_coding_gene TRUE TRUE AT5G55480.1 glycerophosphoryl diester phosphodiesterase family protein Identical to Probable glycerophosphoryl diester phosphodiesterase 1 precursor (EC 3.1.4.46) (GPDL1) [Arabidopsis Thaliana] (GB:Q9FJ62;GB:Q5XEZ7); similar to glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66970.1); similar to protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis thaliana] (TAIR:AT1G66980.1); similar to MRH5/SHV3 (morphogenesis of root hair 5), glycerophosphodiester phosphodiesterase/ kinase [Arabidopsis thaliana] (TAIR:AT4G26690.1); similar to putative glycerophosphoryl diester phosphodiesterase family protein [Nicotiana tabacum] (GB:BAE53680.1); similar to B0806H07.1 [Oryza sativa (indica cultivar-group)] (GB:CAH67272.1); similar to Os04g0472300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053060.1); contains InterPro domain Glycerophosphoryl diester phosphodiesterase; (InterPro:IPR004129) 0.0216820808530105 0.181014243663380 0.859776968968357 1 0.0616966215250672 8.47594210471265 0.0216820808530105 0.145947255822692 AT5G59800_at 4.08507472286328 3.89988087622537 4.0992610496713 4.32856297614871 4.50204503469912 4.32455723238315 3.53788813923554 3.70970190667057 3.87084465142664 4.12006865490513 5.12219183940557 5.10029538412014 5.08690908634738 4.89986167068589 4.9631403939573 5.11866421232833 4.40611161644021 5.09552730054549 3.75556419363313 0.186573690113762 0.182119258654498 0.188290451147771 0.190240486043422 0.183547776311178 0.188022574515024 0.199201570000531 0.195460319583689 0.183554498522704 0.18555652248694 0.186545310475401 0.182895628287930 0.184319544721503 0.198772251173729 0.193285303061784 0.182831969816419 0.182328100669592 0.192950637158088 0.199472256678084 5 5|0 -|/ 24111993 24112932 24112376.1 24111700 24113758 - gene protein_coding_gene TRUE TRUE AT5G59800.1 MBD7 (methyl-CpG-binding domain 7); DNA binding Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. similar to Methyl-CpG binding [Medicago truncatula] (GB:ABD32284.1); contains InterPro domain Methyl-CpG binding; (InterPro:IPR001739) -0.0161048948793765 -0.180403148743554 0.860244761420633 1 0.0615846202432153 8.50566158622067 -0.0161048948793765 0.0665525185621501 AT5G65900_at 3.07734067216492 3.47472192579348 3.82095030594848 4.01892452359139 3.92506749869282 3.22077292634487 3.17690228862614 3.24221644815219 3.04863020716895 3.34685940554512 4.18741332011467 4.24660810843543 3.84560816470403 3.62553519047981 4.12204372995884 3.63740501289639 3.23101409481963 3.58268521293999 2.89281034312772 0.234625624435993 0.231901891035543 0.233510721088425 0.231901891035543 0.234008077598918 0.238475557922784 0.234775135022352 0.236936370905767 0.246339724248138 0.231901891035543 0.231901891035543 0.231901891035543 0.233878535252509 0.231901891035543 0.236725497586495 0.236515867610627 0.245119914320979 0.248117183436607 0.239864356527413 5 5|0 +|/ 26377421 26378339 26377882.375 26375432 26378669 + gene protein_coding_gene TRUE TRUE AT5G65900.1 DEAD/DEAH box helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 27 (EC 3.6.1.-) (RH27) [Arabidopsis Thaliana] (GB:Q9SB89;GB:O49530); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G18600.1); similar to PREDICTED: similar to CG6375-PB, isoform B [Tribolium castaneum] (GB:XP_973872.1); similar to Os03g0802700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051603.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) 0.0212878297928906 0.178702183608197 0.861547144009626 1 0.0612748492462822 6.94755661845138 0.0212878297928906 0.144519029979721 AT5G11100_at 2.3856908391464 2.45965977860826 2.83724760921964 2.7752530638277 1.87765800998697 2.47295002852495 2.18659795023600 2.19656973186926 2.47635208200421 2.49130099911520 2.5811824907504 3.04069328816290 2.82572269075972 2.94271278237884 2.91875457613146 2.86575880383834 2.45742512185391 3.03799216378164 2.47684627428328 0.191508945001262 0.192083117063685 0.192475676950848 0.193411682161697 0.196253820166233 0.191455442416047 0.19715827278863 0.190981563541792 0.199677844881293 0.196620166572365 0.197182398821320 0.191426680850866 0.196363492873249 0.192670576049498 0.194078405893116 0.202033754931596 0.199743270740837 0.191498250144751 0.204366704267526 5 0|5 /|+ 3534670 3535198 3534957.3 3532403 3535222 + gene protein_coding_gene TRUE TRUE AT5G11100.1 C2 domain-containing protein similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05500.1); similar to putative C2 domain-containing protein [Oryza sativa (japonica cultivar-group)] (GB:BAD30714.1); similar to C2 [Medicago truncatula] (GB:ABE86343.1); similar to C2 [Medicago truncatula] (GB:ABE81789.1); contains InterPro domain C2; (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) -0.0181123851407148 -0.177490281394285 0.862475328276747 1 0.0610559225980373 5.05659338884809 -0.0181123851407148 0.1043774655574 AT5G26140_at 1.00834849607639 0.852316461138516 1.55369092538745 1.72172217153171 1.05285846594159 0.906202145918633 0.88573537277988 1.21181058253672 1.05752223410116 1.28136447393277 0.853405187297683 0.992420596301807 1.17331608275455 1.02137680097434 0.51019026099113 1.11946483827359 0.930851326010535 1.33668342968753 1.25181327580796 0.189948486922897 0.191756703463557 0.190921374430621 0.191099411425054 0.186907642597261 0.190423785489072 0.190063600512553 0.189249371763809 0.192301468620225 0.193928118681119 0.190991930802878 0.185425099710626 0.192144344190920 0.191896551950026 0.187874507702519 0.185425099710626 0.192823027579034 0.187841519620403 0.197243011438851 5 0|5 /|+ 9130927 9131594 9131261.444 9130799 9131639 + gene protein_coding_gene TRUE TRUE AT5G26140.1 lysine decarboxylase family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11950.2); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABE86251.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) -0.0161254829545991 -0.176601010733925 0.863156550823459 1 0.0608962200357173 2.24364235761404 -0.0161254829545991 0.0735051827046293 AT5G03270_at 1.46114203275133 1.21193086657762 1.83494874825737 1.65410837492839 1.74660484931038 1.30530783094752 1.61493842157429 1.66959326334635 1.82220549518710 2.02036120638318 1.77464787268542 1.81719155939793 2.12574634546652 2.23549646737474 1.52256803298811 2.00332503536342 1.82971609565674 1.95822469569473 1.65201864978467 0.190348328413621 0.195277294929553 0.191476314671464 0.195999591090503 0.194592417992626 0.20058524240185 0.193095659467680 0.192951086441571 0.197369275939064 0.195781096440955 0.195988904107879 0.187830866677954 0.202875191948820 0.189957003718269 0.191594648047295 0.192197179287281 0.189323592963267 0.188933816935234 0.188743146578010 5 5|0 +|/ 782289 783791 783141.2 781869 783996 + gene protein_coding_gene TRUE TRUE AT5G03270.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37210.1); similar to Conserved hypothetical protein 730 [Medicago truncatula] (GB:ABE89044.1); contains InterPro domain Conserved hypothetical protein 730; (InterPro:IPR005269) -0.0172924719693921 -0.176426219980649 0.863290462390792 1 0.0608649234052173 3.43226828022671 -0.0172924719693921 0.0935999639052939 AT5G02220_at 2.68851206105883 2.4092444334019 3.21885336430253 3.3361292670701 2.10542207415757 2.62654379909603 1.99616772002503 2.24390007541812 2.39804185015034 2.7326295777783 2.34763061717596 2.55200118340225 2.67739718824632 2.53950111093925 2.64351903479898 2.56818473523734 2.63316643009579 2.97801879555026 2.30211457058258 0.197843538074602 0.192706591022723 0.19654803376763 0.193862845942129 0.193078223099847 0.193720533463731 0.192326995849224 0.194543149899624 0.199348965570188 0.192077242885749 0.191368271165031 0.194556703247018 0.199596943685383 0.214695509323991 0.192480360950047 0.191875738457246 0.195948514455556 0.193853028872484 0.199846929819126 5 5 - 441883 442044 441955.182 441705 442144 - gene protein_coding_gene TRUE TRUE AT5G02220.1 similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD81742.1); similar to Os03g0822400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051735.1); similar to FtsJ cell division protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD11646.1) 0.0185552973089763 0.176094722650881 0.863544443160172 1 0.0608056527414095 5.12560795920019 0.0185552973089763 0.112775784646288 AT5G03910_at 8.54166510577514 8.33171278925127 9.36247410898744 9.31863366931976 9.4790043798483 9.0607772379609 8.96096541983471 8.84393389821486 8.4122912746295 8.50072599943898 9.56299898540785 9.53098033286641 9.44858167842458 9.51183709541356 9.39714819532992 9.8440146299207 9.44745691353297 9.5359440844353 8.8728800414812 0.134692804523010 0.136686918976326 0.145468251397698 0.129896140587382 0.137325103835906 0.131028386604584 0.135915437355101 0.134585984730007 0.158273745764399 0.143532820167499 0.134471079651191 0.135662991436557 0.133244020953316 0.138457682477242 0.132648270124618 0.132060906843933 0.135992527839732 0.144258253835902 0.140961598159395 5 5|0 -|/ 1054320 1055268 1054632.875 1054077 1057166 - gene protein_coding_gene TRUE TRUE AT5G03910.1 ATATH12 (Arabidopsis ABC transporter homolog 12); ATPase, coupled to transmembrane movement of substances member of ATH subfamily Identical to ABC2 homolog 12 (ATH12) [Arabidopsis Thaliana] (GB:Q9LZB8;GB:Q56WM5;GB:Q9FFM7); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28345.1); similar to ATPase [Synechococcus elongatus PCC 7942] (GB:YP_399101.1); similar to Os04g0413000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052745.1); similar to OSIGBa0134P10.6 [Oryza sativa (indica cultivar-group)] (GB:CAH67360.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain ABC transporter related; (InterPro:IPR003439) 0.0166582250575955 0.176071353117679 0.863562348627265 1 0.0608014785233802 18.0524804984489 0.0166582250575955 0.0838221269673284 AT5G56080_at 1.54853953410477 1.20630019635248 2.00309544619638 1.63839962327989 1.40041610534858 1.98749683464139 1.76108780073562 1.94864622182779 1.59039947073364 1.69890545336649 1.39507395096922 1.10882262352577 1.98652308297212 1.93308212284539 1.38091997571531 1.81517097226287 2.20609267179043 2.27758385200493 1.55136682436145 0.254982254478767 0.248868133907202 0.251809753686196 0.269423628134597 0.242254197561647 0.252913939257099 0.252039186402411 0.259115711031387 0.262394557885858 0.251269602640006 0.247559346239985 0.256579227231814 0.246559253036776 0.249963945057588 0.252930882378632 0.250251680142317 0.257012119236091 0.252514017711483 0.250624466318697 5 5 - 22728686 22729201 22728927.909 22728628 22729590 - gene protein_coding_gene TRUE TRUE AT5G56080.1 nicotianamine synthase, putative Identical to Nicotianamine synthase 2 (EC 2.5.1.43) (S-adenosyl-L-methionine:S- adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3- carboxypropyltransferase 2) (AtNAS2) (NAS2) [Arabidopsis Thaliana] (GB:Q9FKT9;GB:Q9ZWF7); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT5G04950.1); similar to nicotianamine synthase [Thlaspi caerulescens] (GB:CAC82913.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) 0.0202420393330889 0.174686946537452 0.864623208107383 1 0.060555181024107 3.37498067330983 0.0202420393330889 0.137354910603192 AT5G01230_at 5.44821434067707 5.29959585169069 5.81254133927603 6.3464793929483 5.53871977333111 5.88106541295226 4.39910141886009 4.90353207475882 4.04847557720571 4.5467508241302 5.36681818320823 5.81477467145522 5.68075172799222 5.82932983338978 5.57869849110248 5.22970874126438 5.60805410151725 5.29144641696873 4.84024218587753 0.245420364516746 0.248002483949532 0.251707298305979 0.248866860183562 0.257457090884751 0.260546213486990 0.250903045396082 0.253360997837135 0.264316684413733 0.260148411590504 0.251069092299212 0.245420364516746 0.251622859271067 0.253318613097095 0.245420364516746 0.245420364516746 0.252492047757642 0.245420364516746 0.255684488891765 5 5|0 -|/ 92830 94102 93413.333 92600 95700 - gene protein_coding_gene TRUE TRUE AT5G01230.1|AT5G01230.2 FtsJ-like methyltransferase family protein similar to FtsJ-like methyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G25730.1); similar to Ribosomal RNA methyltransferase RrmJ/FtsJ [Medicago truncatula] (GB:ABD28674.1); contains InterPro domain Ribosomal RNA methyltransferase RrmJ/FtsJ; (InterPro:IPR002877) 0.0206376427161492 0.17454222977497 0.86473411958621 1 0.0605295462500843 10.4678748505285 0.0206376427161492 0.142581513839349 AT5G10750_at 6.8058950867666 7.34440005915751 7.96695221703308 7.82127196607984 8.03838393319176 8.04544925564214 6.76213783737158 7.33095535572808 6.36906593982913 6.04589009285264 7.07881857051392 6.96461790027057 7.87837396742159 7.60245678797496 7.22341360211319 7.47276244318572 7.41249109632022 7.28758725857704 6.39860946417931 0.188860618716158 0.184851942195237 0.183377719093069 0.184968392934948 0.185638753576771 0.188187768845314 0.183725305864636 0.180048652642649 0.202899686588004 0.182991465109269 0.178875814414887 0.180102334248945 0.17886216963372 0.177259989614449 0.177259989614449 0.177259989614449 0.191855127612717 0.187532669346461 0.187729573630168 5 5 + 3399407 3399913 3399631.182 3398952 3400157 + gene protein_coding_gene TRUE TRUE AT5G10750.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24990.1); similar to Os10g0455900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064750.1); similar to Os08g0152600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061005.1); similar to pleckstriny domain-containing protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47745.1); contains InterPro domain Protein of unknown function DUF1336; (InterPro:IPR009769) -0.0200336165349533 -0.172536513407475 0.866271622033774 1 0.0601764329892107 14.3325575649967 -0.0200336165349533 0.137881636389735 AT5G19340_at 0.963543917085129 1.32799621617169 1.46295515492256 1.45799258791084 1.18881554219610 1.16607800349396 1.19533852118997 1.09020817731494 1.57650442758257 1.26172083654986 1.62534451666263 1.31553277768703 1.38152285436506 1.48896102198457 0.998902813321462 1.69702635558473 1.12836884179922 1.71767588974833 1.50155628663734 0.209774956957456 0.209774956957456 0.214636837050453 0.217683271043156 0.213007666121249 0.211313145397428 0.218675354873070 0.209866141597974 0.217021731508086 0.217627970586428 0.213710326630111 0.213719830175087 0.217751378159726 0.211878382065089 0.214984669610427 0.214247077200929 0.211012316186639 0.227796264832688 0.217475160697766 5 5 - 6515391 6515939 6515675.545 6515094 6516207 - gene protein_coding_gene TRUE TRUE AT5G19340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05980.1); similar to hypothetical protein DDBDRAFT_0217565 [Dictyostelium discoideum AX4] (GB:XP_644217.1) -0.0152566278541230 -0.171324906700944 0.86720067340067 1 0.0599650909024717 2.66449638211101 -0.0152566278541230 0.0657652100966742 AT5G40645_at 1.40977024220311 1.68804527598134 1.8754654556009 1.64918306838220 1.53661546644081 1.52232898245755 1.23333782723377 1.67109898906682 1.13815639419378 1.61575150748850 1.66429385250504 1.50281982000656 1.81837507718691 1.58668803472956 1.51911353554119 1.77129682454207 1.90084999074543 1.44687783155433 1.85464869517561 0.195423602084032 0.188149896353464 0.197020608263994 0.192237419157561 0.189960887810505 0.189921471020803 0.198623170558155 0.190614843886186 0.199421806824078 0.189540519563983 0.185683954426219 0.189942864366287 0.191754241883408 0.185788029593282 0.185536901262523 0.189093178177171 0.191270219342288 0.187294599393349 0.195026275005678 5 0|5 /|- 16297805 16297939 16297863.625 16297511 16298200 - gene protein_coding_gene TRUE TRUE AT5G40645.1 nitrate-responsive NOI protein, putative similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G35655.1); similar to Nitrate-induced NOI [Medicago truncatula] (GB:ABE84626.1); contains InterPro domain Nitrate-induced NOI; (InterPro:IPR008700) 0.0169075045987737 0.169726976769772 0.868426276327776 1 0.0596886259260377 3.16696811498949 0.0169075045987737 0.097967841153048 AT5G19020_at 1.55697346659131 1.34988441944401 1.91776518155546 2.06188325094022 1.50156849620786 1.64496526529501 1.33911860173884 1.40600052985385 1.07253507876887 1.28742536482757 0.892708648316508 0.88304159344371 1.17470957272032 0.96310337305881 0.792310466298605 0.97536120337805 1.52237619220081 1.42669540268655 1.33856787746342 0.175337837303221 0.175337837303221 0.176727372803805 0.184546900428725 0.175337837303221 0.18040278649266 0.176768085550749 0.184027775563935 0.175337837303221 0.179262428872393 0.185643007644492 0.177945477654154 0.178819600902603 0.178749639350101 0.178632477012850 0.175337837303221 0.178155822097566 0.176203863290059 0.175337837303221 5 5 - 6352776 6353338 6353043 6352773 6357085 - gene protein_coding_gene TRUE TRUE AT5G19020.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G22070.1); similar to Tetratricopeptide-like helical [Medicago truncatula] (GB:ABE94373.1); similar to Os01g0390600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043111.1); similar to hypothetical protein MtrDRAFT_AC149805g18v1 [Medicago truncatula] (GB:ABE88407.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940) 0.0144553022017391 0.169196614339328 0.868833141585651 1 0.0595974348444624 2.75308544155309 0.0144553022017391 0.0515376770108404 AT5G07390_at 1.55498276275616 1.27750649733165 1.71068578249729 1.97989312427324 1.52762434041853 1.82611150955941 1.66193111296824 1.26309768900115 1.22172750593671 1.88093068264405 1.72709112870523 1.71583500521551 1.76444331228078 1.72967059230243 1.37613653640603 1.49775507588545 2.07269061130733 1.9636609231794 2.20831506423158 0.179833486704472 0.181496443916876 0.183430653436882 0.178975131734381 0.176930819986612 0.175456856242524 0.178245504783592 0.175819588724320 0.175375449262292 0.183379676062348 0.176404760613189 0.180943481048996 0.181207096577917 0.175375449262292 0.177504556027604 0.186337281898362 0.181946898673058 0.185827967370126 0.177665098257717 5 5 - 2336083 2336710 2336433.818 2335896 2339914 - gene protein_coding_gene TRUE TRUE AT5G07390.1 ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A); FAD binding / calcium ion binding / iron ion binding / oxidoreductase similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to respiratory burst oxidase, putative / NADPH oxidase, putative [Arabidopsis thaliana] (TAIR:AT4G25090.1); similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to NADPH oxidase [Nicotiana tabacum] (GB:CAC84140.1); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); similar to respiratory burst oxidase homolog [Nicotiana benthamiana] (GB:BAC56865.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916); contains InterPro domain NADPH oxidase Respiratory burst; (InterPro:IPR013623) 0.0175636988835236 0.169032056709297 0.868959389370926 1 0.0595691983085405 3.3508465102329 0.0175636988835236 0.109124429062357 AT5G59840_at 5.59056779573099 5.56409487364991 6.55326716877802 6.59710323918397 6.2023789375652 6.5421674779398 4.88595062522563 5.26672897181417 5.60221537070958 5.9533703932738 6.94105543745168 6.82656399343705 6.67139256710235 6.7369503936284 6.97259490661182 6.79440239937083 6.42197116223022 6.30237169203636 5.71134388398733 0.172769995617004 0.176487155945795 0.173922910189668 0.182579532911086 0.178743065187077 0.180263950446837 0.182904082255398 0.183190996463137 0.193563624383920 0.190956115464951 0.174321181020316 0.175841917502003 0.172412990017591 0.175389795993785 0.173739979583550 0.175187119620768 0.181594415523815 0.176207360426618 0.185195005028193 5 5|0 -|/ 24124690 24125951 24125188.667 24124441 24126477 - gene protein_coding_gene TRUE TRUE AT5G59840.1 Ras-related GTP-binding family protein similar to ARA3 [Arabidopsis thaliana] (TAIR:AT3G46060.2); similar to Sigma-54 factor, interaction re (GB:ABE82101.1); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Sigma-54 factor, interaction region; (InterPro:IPR002078); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753) 0.0157704093624829 0.163766165673302 0.873001358815529 1 0.0586800474397224 12.1323104037229 0.0157704093624829 0.0887604807167837 AT5G50830_at 1.52393508528168 1.54295034580550 1.80503057055103 2.17324913952859 1.63558192251237 1.60869230524496 1.62368384412292 1.46119291156672 2.55527598782497 1.52029993519401 2.18900074124680 1.57869555966076 1.92935064872014 2.08047531932381 1.80609713257695 1.98690365161972 1.84777883979367 1.79414770958780 1.68781540061748 0.185373347420343 0.190530929121853 0.185409228960052 0.189935486020263 0.182598722057593 0.187517611200438 0.190620273380025 0.183078304593399 0.194343106856432 0.178836575670781 0.187186534316456 0.188444377736495 0.189391761926596 0.181285509731518 0.189642224734357 0.186709365438056 0.189350565889871 0.183828372808177 0.186054266034120 5 5 + 20700931 20701751 20701474.727 20700505 20702081 + gene protein_coding_gene TRUE TRUE AT5G50830.1|AT5G50830.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89389.1)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE89389.1) -0.0147702081716538 -0.163697252564395 0.873054280332136 1 0.0586685968957504 3.5831328363409 -0.0147702081716538 0.0698834179401868 AT5G47930_at 9.91432103962507 10.1957981105363 10.4017767318284 10.5330669794879 10.7442449927315 10.4233176544109 10.0226586212039 9.95790697790344 9.34905359871047 9.4716943439775 10.3217309957755 10.7556519917342 10.0141576780796 9.98520575046667 10.4519591185282 10.1806580552476 10.1403696454823 10.2259212548097 9.41100672178561 0.120460506962355 0.117274324332817 0.113883619657228 0.119117585465299 0.115034704041775 0.126751981774904 0.116588691768966 0.119091590865998 0.128728979348128 0.124847108270854 0.121568026731830 0.114197391574951 0.113703032836691 0.120516865845677 0.117396272057711 0.117606553013642 0.122708930402612 0.115575058297501 0.119651799677520 5 5|0 -|/ 19423664 19424386 19423908.778 19423389 19424626 - gene protein_coding_gene TRUE TRUE AT5G47930.1 40S ribosomal protein S27 (RPS27D) Identical to 40S ribosomal protein S27-3 (RPS27D) [Arabidopsis Thaliana] (GB:Q8L953;GB:Q9FGV6); similar to ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G61110.1); similar to ribosomal protein S27-like protein [Solanum tuberosum] (GB:ABA40465.1); contains InterPro domain Ribosomal protein S27E; (InterPro:IPR000592) 0.0151291281089778 0.163135183076917 0.873485943418037 1 0.0585753828913375 20.1091572381776 0.0151291281089778 0.0780961017764169 AT5G63660_at 1.26032648845783 1.55878310772542 2.03172939782970 2.09183186174026 1.48315925838676 1.63821226042882 1.38659098051360 1.39739743008330 1.58684602529286 1.77381026045816 1.35664628569537 1.45334029693315 1.41592672703493 1.32454384095687 1.49550824026627 1.50628592447795 1.43488162550184 2.0264332916593 1.60517090586928 0.192632174748113 0.196551440022911 0.194803660737607 0.204851422046686 0.193395289586277 0.193665604972862 0.192106312945236 0.196471358730429 0.201561833943485 0.195216205989567 0.190702260226802 0.197944775240157 0.207933866861448 0.196026367427007 0.194472046223012 0.194944720104327 0.197683249562233 0.196043651005176 0.193263328215 5 5|0 +|/ 25502920 25503214 25503120 25502918 25503288 + gene protein_coding_gene TRUE TRUE AT5G63660.1 LCR74/PDF2.5 (Low-molecular-weight cysteine-rich 74) Identical to Putative low-molecular-weight cysteine-rich protein LCR74 precursor (LCR74) [Arabidopsis Thaliana] (GB:Q9FFP8;GB:P82783); similar to LCR68/PDF2.3 (Low-molecular-weight cysteine-rich 68), protease inhibitor [Arabidopsis thaliana] (TAIR:AT2G02130.1); similar to proteinase inhibitor se60-like protein [Citrus x paradisi] (GB:AAG38520.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Knottin; (InterPro:IPR003614) 0.0142020762949031 0.162717602333075 0.87380666875046 1 0.058506337465301 3.18448960294861 0.0142020762949031 0.0591550538991192 AT5G25920_at 1.01933875840868 1.16792897190376 1.20564430078601 0.917492748199643 0.914947916618048 1.24054990458790 0.786684150703108 1.09245138188874 1.29367721459616 1.48523241982064 1.43946720885708 1.23229904940939 1.06541163606475 1.61358905109922 1.18346278917108 1.29869264822573 1.68608280614663 1.17491688118330 1.02638586989145 0.178025093631019 0.185786178988327 0.177994003329428 0.179830351240034 0.177629546452684 0.186208483044766 0.181282428795088 0.179527968081319 0.183693883859441 0.193552927181139 0.184077647532317 0.178995007186472 0.179860222422145 0.183138762415336 0.181859263435278 0.185273887221428 0.185530251379213 0.176263021038990 0.179353511691861 5 5 - 9044221 9044861 9044514.182 9044209 9046000 - gene protein_coding_gene TRUE TRUE AT5G25920.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29750.1) -0.0160414561521614 -0.162510005519874 0.87396612355526 1 0.0584720776071118 2.34571581340652 -0.0160414561521614 0.0955131039899164 AT5G20740_at 3.52267968833015 3.44481702529417 3.22737678558251 3.35280514849892 3.40425942415397 4.11651189626985 3.68017659883851 3.7124771214252 2.97216965383481 3.45112428437766 3.92396766158407 5.06242749109652 5.03788919234565 4.48435204462583 5.63932006733344 5.16223246344201 4.24126887669228 4.16352167678886 3.50851425253452 0.244516862604716 0.237945285598276 0.243239611101329 0.247179341669465 0.241436878467403 0.237116110499258 0.237116110499258 0.243756590913224 0.243881857465636 0.239081185344541 0.237116110499258 0.242738942047876 0.247544573430984 0.237116110499258 0.245068166118964 0.238449288044092 0.23727661024202 0.238298373147564 0.237881786122313 5 5 - 7025885 7026373 7026093.364 7025688 7026534 - gene protein_coding_gene TRUE TRUE AT5G20740.1 invertase/pectin methylesterase inhibitor family protein similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT4G25260.1); similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G62770.1); similar to putative ripening-related protein [Vitis vinifera] (GB:CAB85625.1); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) -0.0179344029760533 -0.161728619799996 0.87456635736793 1 0.0583435149840269 7.57012554329295 -0.0179344029760533 0.126002546555835 AT5G62990_at 2.39738157028333 2.24995883004578 2.57865744507583 2.32485287685199 2.32390118634949 2.62272861746748 1.71706028679768 1.63336445051038 1.94118258086725 2.15588313714676 2.22904105864377 1.64763732436204 2.10116003697203 2.01755399730316 1.79466241704025 2.03023790391849 1.98159373289397 1.97239509295968 1.98213801508784 0.190908092681220 0.192485658361309 0.194330658365573 0.198809853177874 0.194689168414678 0.200897567298562 0.189438390276151 0.193532375550844 0.196653426779116 0.192451424128527 0.193744106471839 0.190926383908749 0.195784454293692 0.193925836522039 0.194474356680595 0.192351170490737 0.193868536687312 0.191959519207791 0.191152051071352 5 5 + 25295941 25296482 25296171.909 25295054 25296538 + gene protein_coding_gene TRUE TRUE AT5G62990.1 EMB1692 (EMBRYO DEFECTIVE 1692) similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48040.1); similar to hypothetical protein 31.t00019 [Brassica oleracea] (GB:ABD65113.1); similar to Os05g0571100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056371.1); similar to Os04g0312100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052443.1); contains InterPro domain Protein of unknown function DUF860, plant; (InterPro:IPR008578) 0.0147465348096677 0.161276062122499 0.874914034613722 1 0.0582693368310636 4.23008137786222 0.0147465348096677 0.0739194746377125 AT5G49110_at 1.50573581685665 1.72801427443627 1.57715302147670 2.36537972335517 1.70689968276726 1.78800430257709 1.80122724970549 1.532052418299 1.83269494831089 2.07510728284116 1.71022609269979 1.63352414639288 2.12906315558058 2.02572227989010 1.87489809851421 2.00287667590657 2.02936299770141 2.42136514553787 1.91298447694904 0.196253274806983 0.196306760999237 0.197955622331212 0.194219340038631 0.196524318743687 0.192907256338506 0.201576342447683 0.198299040116851 0.202188145931230 0.208760870275153 0.198799239876257 0.199395277400368 0.195073065036622 0.204692647351393 0.205704256709182 0.191903286406821 0.199041450903918 0.193665441029339 0.197125188526471 5 5 + 19922572 19922965 19922771.545 19917429 19923151 + gene protein_coding_gene TRUE TRUE AT5G49110.1 similar to PREDICTED: similar to KIAA1794 protein isoform 3 [Pan troglodytes] (GB:XP_001166926.1); similar to Os03g0341200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050070.1); similar to PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] (GB:XP_001166960.1) -0.0195739777111014 -0.160988279791020 0.875135137685318 1 0.0582222743436468 3.70987934121501 -0.0195739777111014 0.14984396483272 AT5G57720_at 1.03775693835603 1.45293375202749 1.13648571952809 1.78146308008630 1.16697776789190 1.39260960225882 1.06268510776058 1.78455011038423 1.12224307036779 1.28092373037498 1.03063002667303 1.55368045291259 1.74419045157639 1.65782123839951 1.06631466707949 1.45528385517225 1.59123900800095 1.39616573119537 1.59451399164421 0.219658431379727 0.220269123279121 0.219551270721087 0.231591791065848 0.224085862241694 0.22118152315801 0.239188569605886 0.233911296777932 0.223084648975723 0.226150941999158 0.227548106967167 0.221448108517348 0.223498909603883 0.226105262821469 0.225253856440378 0.227204627210566 0.219551270721087 0.226582526019772 0.222200263342290 5 5 - 23407168 23407864 23407525.364 23406971 23408846 - gene protein_coding_gene TRUE TRUE AT5G57720.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to Transcriptional factor B3; Cupredoxin [Medicago truncatula] (GB:ABE81219.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.0224202085376745 -0.160834531506662 0.875253267027269 1 0.0581971653841577 2.73667073128928 -0.0224202085376745 0.186415009907050 AT5G58530_at 3.10770283401721 3.22094943077972 2.80386397360116 2.7419402031742 2.56348942048002 3.1251176024473 2.51505073082323 3.0025088309697 2.92733864495155 2.33719621975512 3.42318532260351 3.62731931263266 3.38178368201531 3.56740451815549 3.81087355254868 3.33567502140420 3.02449417072427 3.22837097255280 2.21349414222292 0.212080083584136 0.209635356742011 0.209635356742011 0.211566764436092 0.213742946332043 0.212756974009601 0.213523037412019 0.214019902819865 0.209635356742011 0.209635356742011 0.209635356742011 0.209635356742011 0.209635356742011 0.210922634084831 0.211795148254932 0.21219972558705 0.216316472289529 0.209635356742011 0.215066132663729 5 5 + 23677967 23678420 23678132.545 23677612 23678575 + gene protein_coding_gene TRUE TRUE AT5G58530.1 glutaredoxin family protein similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G13810.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAV43880.1); similar to Os01g0829400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044688.1); similar to Os05g0353600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055284.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) -0.0179971695075447 -0.159417517535461 0.876342150435811 1 0.0579668734685885 5.84386020564797 -0.0179971695075447 0.13061912896301 AT5G58784_at 0.856813194089251 0.990739409655816 1.29505868427291 1.18129095297703 0.554037501872986 0.875549218377388 0.911085647536722 0.854996499083003 1.31356534989671 0.722259455474853 1.21023210537005 0.994517322711705 1.11210423265234 0.870219933870214 0.632790844841877 0.897231300763587 0.99744335295874 1.19006345388811 0.685862401724185 0.240975156040325 0.235404626057211 0.23840789274827 0.245535680880525 0.235404626057211 0.243594433982246 0.241907208743216 0.235404626057211 0.246208130525279 0.240180056517872 0.238916287213399 0.244290796762295 0.250987691882174 0.237117877435332 0.235404626057211 0.235404626057211 0.236124643215334 0.239709668675543 0.239426825022913 5 5 - 23757179 23758030 23757505.455 23757176 23758220 - gene protein_coding_gene TRUE TRUE AT5G58784.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative Identical to Dehydrodolichyl diphosphate synthase 5 (EC 2.5.1.-) (Dedol-PP synthase 5) [Arabidopsis Thaliana] (GB:Q570Q8;GB:Q9LUY1); similar to dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative [Arabidopsis thaliana] (TAIR:AT5G58780.1); similar to Os01g0857200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044851.1); similar to undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120] (GB:NP_487035.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) 0.0140507247583891 0.158580338970442 0.87698559428595 1 0.0578317686883416 1.88759858219013 0.0140507247583891 0.0641459050501668 AT5G55660_at 7.86127055237703 7.82115081459543 8.3621111998122 8.4095727111078 8.6562092633625 8.68189914956558 7.79902409756048 7.43549903376551 6.6145721763977 7.36227376978886 8.24253344205486 8.33288056917023 8.11947244519039 8.24586053720903 8.14518557979019 8.15546079440268 8.5546760068999 8.0506889664568 7.4411045976682 0.144070653243818 0.144352534605136 0.147738023256659 0.143986172771584 0.153716109841143 0.148488301439303 0.142323982914755 0.154622570521779 0.174681318544312 0.155256093869405 0.147331978137245 0.145260760411410 0.144882272038453 0.145461958962661 0.149343169536445 0.143634823299945 0.150703006168813 0.141059531343197 0.16049262760209 5 5|0 +|/ 22559401 22560335 22559674.111 22555839 22560700 + gene protein_coding_gene TRUE TRUE AT5G55660.1 GTP binding / RNA binding similar to GTP binding / RNA binding [Arabidopsis thaliana] (TAIR:AT4G26630.2); similar to Os03g0596900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050604.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAO59982.1); contains InterPro domain GTP-binding signal recognition particle SRP54, G-domain; (InterPro:IPR000897) 0.0138751011198666 0.156679846540266 0.878446631938661 1 0.057527692327222 15.8134229230675 0.0138751011198666 0.0639770314570057 AT5G65350_at 1.06228031229650 0.838819050520853 1.40813242873083 1.25282998722150 1.02733663121788 1.02890078135032 1.37655359624454 1.28783480487165 1.43396451479235 1.35429017802421 1.69829273321011 1.52226527582826 1.47838847007729 1.63685916772541 1.95835623969448 1.14277564472342 1.19695614007751 1.40304709159612 1.24637679373748 0.187234041398395 0.181451794292718 0.183615782715151 0.190652532871613 0.181406415339699 0.184695150408199 0.185271058247645 0.188032140197309 0.180801946966167 0.19963964360958 0.182483927198258 0.18555563731261 0.187572854381407 0.186303694452613 0.194253479985592 0.190738198261447 0.183850753229348 0.188134782658485 0.187823245683291 5 5 - 26136707 26137013 26136863.545 26136437 26137051 - gene protein_coding_gene TRUE TRUE AT5G65350.1 histone H3 Identical to Histone H3-like 5 [Arabidopsis Thaliana] (GB:Q9FKQ3); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to Histone H3.2 (GB:P68427); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone H3; (InterPro:IPR000164); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.0132330521641871 0.155709429809227 0.879192840810584 1 0.0573738338049148 2.58508332783239 0.0132330521641871 0.0495333280362304 AT5G02100_at 5.8869598736316 6.2224309165414 6.65164671184731 6.36417060543132 6.77696063440331 6.22522469798207 4.11587049821716 4.35635980224766 3.80422648762817 3.85961849613565 4.57371882199614 4.44392484521978 4.58839631630363 4.65013703324952 4.39416834570611 4.16563196829049 4.87263553407899 4.59204903887622 4.31417319669883 0.266043364150189 0.270586948932781 0.280458909082871 0.275177582313492 0.265526100308617 0.263887899443959 0.265234640435348 0.263887899443959 0.270828079950247 0.265907793209140 0.267204161471980 0.266844402901375 0.265104037624049 0.266127796604482 0.267086915669775 0.267110225973816 0.280564671584469 0.279015945073959 0.264020418276055 5 0|5 /|+ 415352 415989 415646.5 413517 416222 + gene protein_coding_gene TRUE TRUE AT5G02100.1 UNE18 (unfertilized embryo sac 18); oxysterol binding similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT3G09300.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT5G59420.1); similar to Os03g0274000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049701.1); similar to oxysterol-binding protein [Solanum tuberosum] (GB:AAR25799.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648); contains InterPro domain C2; (InterPro:IPR000008) 0.0173898689001435 0.154884503740895 0.879827270458422 1 0.0572437906727096 10.0888306999307 0.0173898689001435 0.129204862814349 AT5G18970_at 3.0526401974451 3.17528255636245 3.03117412227293 2.83610337924157 3.18646517039861 3.29994935059169 2.75265472843545 3.5632665481511 3.34860155854274 3.25881003403586 4.94202370109218 5.81878100535261 4.10802541349215 4.31467310321185 5.09364114003737 4.95249483049067 4.25358379921256 4.21353376720396 3.53611164580433 0.244526724728429 0.233413216690219 0.239951194784415 0.241287779256562 0.243642676148672 0.237836378425579 0.237090944720967 0.233413216690219 0.237996768515155 0.248136412163784 0.233413216690219 0.239456969764713 0.233413216690219 0.238063506491235 0.239169649684726 0.23821334848954 0.242893064172007 0.237774182348986 0.238126529914422 5 5|0 -|/ 6333731 6334501 6334178 6333213 6334644 - gene protein_coding_gene TRUE TRUE AT5G18970.1 AWPM-19-like membrane family protein similar to AWPM-19-like membrane family protein [Arabidopsis thaliana] (TAIR:AT1G29520.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAT85140.1); contains InterPro domain AWPM-19-like; (InterPro:IPR008390) 0.0186201223697952 0.154732025654922 0.87994454718175 1 0.0572198289716894 7.15882651051535 0.0186201223697952 0.147153858776237 AT5G14030_at 10.0641765199033 10.1592076632594 10.7631143851516 10.6957687128000 10.3596166508310 10.1997627938073 9.76624020224637 10.0010839302884 9.55101318101394 9.68706622445483 10.4658169151997 10.6348133821409 10.1562257904009 10.2213697763136 10.8210020343815 10.1421061033162 9.65199029099156 10.3374422453084 9.32371476169002 0.109876455881152 0.106454972005718 0.114051945307685 0.109621655246445 0.107606210429068 0.112970684498163 0.115032661309394 0.110682951257727 0.132715522184483 0.119646713162625 0.106454972005718 0.10810994559174 0.114205574827750 0.119640016314662 0.107010531977646 0.106454972005718 0.118202105241853 0.109291801016563 0.123256864962364 5 5|0 +|/ 4526920 4528204 4527626.556 4526786 4528411 + gene protein_coding_gene TRUE TRUE AT5G14030.1 translocon-associated protein beta (TRAPB) family protein similar to translocon-associated protein beta family protein-like [Solanum tuberosum] (GB:ABB87132.1); contains InterPro domain Translocon-associated beta; (InterPro:IPR008856) -0.0132262980763764 -0.154145781604671 0.880395478002574 1 0.0571279203543784 20.163343293774 -0.0132262980763764 0.0531340356281216 AT5G51300_at 6.69646537617819 7.00543986662987 7.44357693518709 7.81257332386483 7.84019050078563 7.82643018360575 6.41380940825966 6.71153417185417 6.43618541228608 6.00608509432508 7.27739187272448 7.35840481866806 7.10281286712435 7.55868446594426 7.28689283634594 7.81982826328937 7.59807347663763 7.49404668131715 6.86537512612062 0.166952282289208 0.168124574857587 0.166378847295274 0.171140899495899 0.170742265368992 0.169531137289359 0.172937573757023 0.165957344143083 0.176466176648915 0.177352344542331 0.165916533730691 0.163374953881718 0.163374953881718 0.164243220930963 0.167036206707784 0.163374953881718 0.184878667144835 0.174703407114115 0.166339844471078 5 5 - 20867194 20867617 20867378.727 20866123 20869560 - gene protein_coding_gene TRUE TRUE AT5G51300.1|AT5G51300.2|AT5G51300.3 splicing factor-related|nucleic acid binding / nucleotide binding / zinc ion binding similar to KH domain-containing quaking protein, putative [Arabidopsis thaliana] (TAIR:AT1G09660.1); similar to OSJNBa0044M19.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE05015.1); similar to Os04g0385700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052619.1); similar to Splicing factor 1/branch point binding protein (RRM superfamily) (ISS) [Ostreococcus tauri] (GB:CAL55634.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain KH; (InterPro:IPR004087); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504); contains InterPro domain KH, type 1; (InterPro:IPR004088) -0.0153133364232849 -0.153726167433811 0.88071826675945 1 0.057062348397131 14.1552018647125 -0.0153133364232849 0.0979637601151361 AT5G20770_at 0.424035911715402 0.312866657895483 0.713191061896358 0.48979347618153 0.384026919224945 0.587653143390973 0.81239416278454 0.317292659091816 0.315464480892621 0.508227824018717 0.860525830527042 0.629525453131692 0.660274419613426 0.0500693000387361 0.368853021355807 0.26162054231836 0.435393496235094 0.682866124722252 0.506757186467515 0.188616094804398 0.195056418638168 0.191404517151977 0.206277969535537 0.190583391699896 0.189945274718647 0.190063370061278 0.187224139644152 0.194354091594941 0.195677964639571 0.195623158245658 0.190192882516729 0.199854115536292 0.192697579629550 0.187224139644152 0.192756043634126 0.193626523214678 0.199206362894792 0.19281090233096 5 5 - 7034241 7034749 7034454.636 7034190 7034885 - gene protein_coding_gene TRUE TRUE AT5G20770.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G34820.1); similar to hypothetical protein 40.t00047 [Brassica oleracea] (GB:ABD65162.1) 0.015523954659837 0.153375322587359 0.880988172079822 1 0.0570076593825467 0.973718842665507 0.015523954659837 0.102212803415222 AT5G42010_at 3.55440768010907 3.5289353897155 4.91648921989796 4.65673841394576 3.90681414759941 4.07317211826581 2.83989796559968 3.01349577655201 3.20110893852087 2.85571238030698 2.67745087909707 2.63443723753908 2.91414456024251 3.15648900350968 3.0601446668726 2.80103735669269 3.09490752596342 3.15509681326215 2.80596675467812 0.234424636913171 0.230214351592528 0.24975178507516 0.259244476841181 0.236041943428155 0.246501640487721 0.235477021157363 0.239807552856258 0.237423665669498 0.234216808445412 0.230951653328397 0.230020060349015 0.238092630678206 0.231063390036385 0.240325185021172 0.230291584632407 0.243036660295904 0.235256294344723 0.236912946940691 5 5 + 16821303 16821916 16821682.455 16819508 16822241 + gene protein_coding_gene TRUE TRUE AT5G42010.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G64610.2); similar to WD-40 repeat [Medicago truncatula] (GB:ABE94388.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.0134702939058537 0.153302032988283 0.881044555851735 1 0.056996250844817 6.75673193724368 0.0134702939058537 0.0614113663292128 AT5G27270_at 6.55247108073194 6.14038594039691 7.51894391574165 7.35746227837051 7.90627990881977 7.03929591358679 6.93362327073519 5.85323784814656 5.68549874874891 6.4838945547022 7.28582306166188 7.42633885823523 7.27281897213746 6.83848638460739 7.2146552407202 7.81256140655713 7.30189892814179 6.81023771650299 6.42142539603127 0.176718887648059 0.178711133756025 0.185529921952834 0.175919172990613 0.182246593317285 0.180836759575306 0.174306468895260 0.176114598205031 0.194590513589245 0.178042496919165 0.174563727950762 0.177966599771208 0.182530478694972 0.187643922171809 0.174562968698024 0.174088140288524 0.194801515631424 0.190544396714813 0.174088140288524 5 0|5 /|+ 9609179 9609487 9609352.7 9605653 9609790 + gene protein_coding_gene TRUE TRUE AT5G27270.1 pentatricopeptide (PPR) repeat-containing protein similar to PGR3 (PROTON GRADIENT REGULATION 3), binding [Arabidopsis thaliana] (TAIR:AT4G31850.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67773.1); similar to Os06g0111300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056584.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.0265782757540045 0.152845593852731 0.881395723012255 1 0.0569253219399548 13.6338585883485 0.0265782757540045 0.251661253915591 AT5G19010_at 9.75245711986047 9.67698947374016 10.3442236751669 10.4771282398994 10.5736323142661 10.3714858142746 9.90169018981935 9.89042835484111 9.6037407804962 9.67202541101911 10.3911601336984 9.95227036130785 10.3259044346558 10.4182382714304 10.1667244966764 10.4567726313161 10.4827442346560 10.3955262863899 9.55748552489948 0.0741758809494557 0.0742385187668162 0.0748599083661109 0.0726413733757687 0.073079115237327 0.0795532076308647 0.0756517624363739 0.0765001717635587 0.0874125509903629 0.0773063519865429 0.0783345607436569 0.0726413733757687 0.0770872197053761 0.0747678868213834 0.0757331358207224 0.0730930324049824 0.0761013906734362 0.0759585653973965 0.0785060099299915 5 5|0 -|/ 6345174 6345911 6345536.333 6344791 6348214 - gene protein_coding_gene TRUE TRUE AT5G19010.1 MPK16 (mitogen-activated protein kinase 16); MAP kinase member of MAP Kinase Identical to Mitogen-activated protein kinase 16 (EC 2.7.11.24) (MAP kinase 16) (AtMPK16) (MPK16) [Arabidopsis Thaliana] (GB:Q8W4J2); similar to ATMPK8 (Arabidopsis thaliana MAP kinase 21), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G18150.1); similar to ATMPK20 (Arabidopsis thaliana MAP kinase 20), MAP kinase [Arabidopsis thaliana] (TAIR:AT2G42880.1); similar to MPK9 (MAP KINASE 9), MAP kinase [Arabidopsis thaliana] (TAIR:AT3G18040.1); similar to double HA-tagged mitogen activated protein kinase 16 [synthetic construct] (GB:ABG54343.1); similar to Mitogen-activated protein kinase 14 (MAP kinase 14) (GB:Q75KK8); similar to mitogen activated protein kinase 6 [Zea mays] (GB:AAQ94319.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.0127917987373971 0.152634899616299 0.88155783229029 1 0.056892651867636 20.0908801536025 0.0127917987373971 0.0438989663656434 AT5G57190_at 4.19092572398671 3.69747183896807 5.56663134548647 5.00210241069708 5.66153783758497 5.46182427632412 5.28923890899681 5.0967859976548 4.03387679240381 4.28530574677260 5.47770496161473 4.41957097981783 4.29410913009238 5.00656398668336 4.48801246562054 5.22676714208484 5.68764866405968 5.47600444636885 4.01068024115175 0.218852206313934 0.213412986432051 0.208963261234173 0.202325079545834 0.217996965219267 0.218112753353727 0.213843718976977 0.202325079545834 0.225503967843330 0.202480586389444 0.209981031110399 0.202517571534886 0.207450208212453 0.206690482209509 0.20720334536165 0.209892678803589 0.223991576557813 0.202325079545834 0.205179188735302 5 5|0 -|/ 23188771 23189920 23189355.6 23188757 23192590 - gene protein_coding_gene TRUE TRUE AT5G57190.1 phosphatidylserine decarboxylase, putative similar to PSD2 (Phosphatidylserine decarboxylase 2) [Arabidopsis thaliana] (TAIR:AT4G25970.1); similar to phosphatidylserine decarboxylase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD87120.1); similar to Os01g0959800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045461.1); contains InterPro domain Phosphatidylserine decarboxylase-related; (InterPro:IPR003817); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973); contains InterPro domain Phosphatidylserine decarboxylase; (InterPro:IPR005221) -0.0176850247008539 -0.152035394665690 0.882019125744502 1 0.056799938521162 9.55556578353846 -0.0176850247008539 0.138347791397132 AT5G22960_at 0.0808052095544032 0.635245387547281 0.38305049991165 0.503920061867794 0.426837748781064 0.116857598405698 0.398424313252037 0.103811718998611 0.343998549001419 0.379741430846068 0.292184289385904 0.482872157678704 0.77804414740218 0.372200824367626 0.176766451807651 0.602963690071282 0.0367571230639626 0.371569101829293 0.220414377159559 0.334069915528113 0.342868312357657 0.334069915528113 0.334069915528113 0.338025348967548 0.334069915528113 0.334069915528113 0.334069915528113 0.34981083733572 0.334069915528113 0.334069915528113 0.334069915528113 0.341790652934036 0.347694564724968 0.338122707581872 0.335426380636992 0.34100333737153 0.357855172067464 0.334069915528113 5 5|0 -|/ 7684341 7684978 7684660.25 7684017 7685055 - gene protein_coding_gene TRUE TRUE AT5G22960.1 serine carboxypeptidase S10 family protein similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to carboxypeptidase Y-like protein (GB:AAB04606.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) 0.0166394458605405 0.151825681981467 0.882180501548367 1 0.0567675922261454 0.683062988391404 0.0166394458605405 0.122965980405561 AT5G07570_at 0.747081409274749 0.52982136837909 0.417335614451772 0.48669880370194 0.716908284375802 0.608475281525174 0.647962711790448 0.188068297204007 0.404462736764344 0.555510458004846 0.204815033923758 0.571818296441503 0.969743923491743 0.243822370497928 0.811188067238421 0.850701557092421 0.772656882217802 0.713543214172165 0.844341488955177 0.216756614550554 0.216756614550554 0.229993967983889 0.216756614550554 0.216756614550554 0.217674529112631 0.216756614550554 0.218751145888831 0.227177506181285 0.219086244101299 0.220905735106618 0.216756614550554 0.223037731999398 0.217598556163942 0.217399600598166 0.216812967844138 0.227021392319984 0.217049899140675 0.228533804748874 5 5 + 2395843 2396249 2396066.091 2391723 2396330 + gene protein_coding_gene TRUE TRUE AT5G07570.1 glycine/proline-rich protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22142.1); similar to flagelliform silk protein [Nephila clavipes] (GB:AAF36090.1) -0.0147124244866206 -0.151654124455858 0.882312520786586 1 0.0567411640689018 1.16465616935917 -0.0147124244866206 0.0907957917897212 AT5G37610_at 1.91389224300005 1.74325103058289 1.9181469032781 2.27882204089520 1.65342912320606 1.80282765288884 1.79205599425214 1.67102711830474 2.03350261455462 1.66897392227792 1.74900793822363 1.45212016373581 1.96007884078786 2.46411967498010 1.98008778577505 1.85018617142193 2.26001284050433 2.29125329077622 1.87156997980357 0.230360008114413 0.232322031896175 0.230360008114413 0.240668105950321 0.236436637950151 0.23111276270561 0.230360008114413 0.235222899951796 0.24537289853966 0.232117150103229 0.239708291128668 0.233339323800742 0.243489933500934 0.233096817276301 0.241376829504884 0.230360008114413 0.238710252747978 0.235323837819978 0.236808824048746 5 5 + 14955355 14955764 14955544.818 14955351 14955842 + gene protein_coding_gene TRUE TRUE AT5G37610.1 voltage-gated ion-selective channel similar to porin, putative [Arabidopsis thaliana] (TAIR:AT3G01280.1); similar to porin [Prunus armeniaca] (GB:AAD38145.1); contains InterPro domain Porin, eukaryotic type; (InterPro:IPR001925) -0.0139589571098271 -0.151264011907078 0.882612739362368 1 0.0566811785750852 3.77611843521150 -0.0139589571098271 0.0766483482844828 AT5G33340_at 0.824511534192289 0.618033979192671 0.87573692822939 1.21621143423905 0.66915035008236 0.438584923811806 0.776148390650147 0.672085398000082 0.421010829983462 0.937413178173399 0.601190626536883 1.04602005989735 1.23868042636980 0.803122059967736 0.829982925265827 0.481247912837917 0.799597861917374 1.08101081141601 1.19819510576602 0.217165515585011 0.214706445955080 0.223654410596105 0.216970860075514 0.220881210616006 0.226817350339804 0.230399343191622 0.214706445955080 0.227794021953625 0.214706445955080 0.225551606398647 0.216833441959337 0.219819467629704 0.217223945243813 0.219967448350190 0.218784718154517 0.220280154814393 0.232292279939862 0.235737760997511 5 5 + 12612484 12612905 12612672 12611697 12613182 + gene protein_coding_gene TRUE TRUE AT5G33340.1 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase/ pepsin A Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT1G64830.1); similar to Eukaryotic aspartyl protease, putative [Medicago truncatula] (GB:ABE90750.1); contains InterPro domain Peptidase A1, pepsin; (InterPro:IPR001461); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007) -0.0141380462415293 -0.150587560979643 0.88313336095175 1 0.0565775289232083 1.61746434571659 -0.0141380462415293 0.081638047869295 AT5G61310_at 6.45926709959354 6.48114597903573 7.23587483744451 6.94408319567219 7.30399428925128 6.85975828208986 6.24988337314282 6.36363126683777 5.44561733363127 5.74967843918541 6.51412131005128 7.18453433719429 6.72841942317354 6.95492890924558 6.78153994623176 6.80839974045879 6.95050721301405 6.37532418811044 5.07070314205773 0.212107026179730 0.204954916640244 0.208030179383777 0.200801984423199 0.203825046855871 0.211624791204458 0.205261245648128 0.208288237173207 0.219632734564651 0.206108314868954 0.200801984423199 0.200949537318387 0.200801984423199 0.212667621897130 0.210112417530857 0.20171656190536 0.209657226928866 0.210916001960855 0.207863084779544 5 5 - 24670770 24670937 24670858.182 24670635 24672086 - gene protein_coding_gene TRUE TRUE AT5G61310.1|AT5G61310.2|AT5G61310.3 cytochrome c oxidase subunit Vc, putative / COX5C, putative|cytochrome-c oxidase Identical to Probable cytochrome c oxidase polypeptide Vc-3 (EC 1.9.3.1) (Cytochrome c oxidase subunit 5c-3) [Arabidopsis Thaliana] (GB:Q9FLK2); similar to cytochrome c oxidase subunit Vc family protein / COX5C family protein [Arabidopsis thaliana] (TAIR:AT2G47380.1); similar to Os12g0561000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067021.1); similar to Cytochrome c oxidase polypeptide Vc-2 (Cytochrome c oxidase subunit 5c-2) (GB:Q8VY39); contains InterPro domain Cytochrome c oxidase subunit Vc; (InterPro:IPR008432) -0.0147875755161068 -0.150571738860568 0.883145538932556 1 0.0565751101028471 12.8418155512467 -0.0147875755161068 0.0941368477071358 AT5G53530_at 8.47155982361719 8.8246598552575 9.22024745837378 9.22368176814662 9.6552334110930 9.11749289075748 8.320272992621 8.72823885547832 8.38812877106406 8.11109964227467 9.23205100765819 9.00149629143533 9.08953358184089 9.21539992894385 8.88433737099227 9.06301382896781 8.57973801734735 9.05251322973519 7.96434719131528 0.129117247449346 0.122473448050272 0.124694283662440 0.125582888896088 0.128534492411607 0.119484146342021 0.123139972942783 0.131371127493959 0.122876324316952 0.123000344484216 0.120407543957431 0.120672457061598 0.117423813808520 0.122558415210239 0.121661081762902 0.123166469608351 0.129918515056565 0.125284916291075 0.126161429166419 5 5|0 -|/ 21763515 21764561 21764046.875 21763261 21765821 - gene protein_coding_gene TRUE TRUE AT5G53530.1 vacuolar protein sorting-associated protein 26, putative / VPS26, putative Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. similar to vacuolar protein sorting-associated protein 26, putative / VPS26, putative [Arabidopsis thaliana] (TAIR:AT4G27690.1); similar to vacuolar protein sorting-associated protein 26-like protein [Solanum tuberosum] (GB:ABA46760.1); contains InterPro domain Vacuolar protein sorting-associated protein 26; (InterPro:IPR005377) -0.0170228423750258 -0.150082621653101 0.883522018656103 1 0.0565004606780999 17.5298161862513 -0.0170228423750258 0.131827727031617 AT5G65000_at 6.75361210716072 7.35495417908759 7.69266390822405 7.97122541489375 8.0645290924313 7.66915768146626 6.46704963398306 6.74764342523345 5.60098883901115 5.61340142799338 6.55401033286528 7.03247304624166 6.9205564312284 6.78938869341953 6.61174724508223 6.87802990731538 6.38075108028769 6.89381182205114 5.75716782515856 0.249603207532042 0.233361898455515 0.253736110454874 0.240985651916540 0.24121093776258 0.241638603191869 0.248427200408051 0.239111480238926 0.259541350401155 0.232891077448900 0.239520038318436 0.231124713661072 0.235455226007701 0.237519914656353 0.233870453188468 0.232853712375153 0.260873153048658 0.239175257857944 0.246874749893467 5 5|0 -|/ 25982405 25983144 25982724.3 25982186 25984619 - gene protein_coding_gene TRUE TRUE AT5G65000.1|AT5G65000.2 nucleotide-sugar transporter family protein similar to ATPUP12 (Arabidopsis thaliana purine permease 12), purine transporter [Arabidopsis thaliana] (TAIR:AT5G41160.1); similar to Os02g0573300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047201.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97568.1); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271)|similar to AT4G18200/ATPUP7 (Arabidopsis thaliana purine permease 7), purine transporter [Arabidopsis thaliana] (TAIR:AT4G18197.1); similar to Os02g0573300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047201.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAF97568.1); contains InterPro domain Nucleotide-sugar transporter; (InterPro:IPR007271) 0.0176790888513847 0.149797670517979 0.88374136308346 1 0.0564570826875257 13.5474954805762 0.0176790888513847 0.142100982201660 AT5G24560_at 1.81678559401549 1.69551818288911 1.92270821784127 1.37410398746718 1.43531413209535 2.04990707593614 1.57099965129961 1.28094657040055 1.39634297596182 1.84584148677528 1.44076524344865 1.67232299221515 1.63628723154339 2.20397613887743 1.69101356791358 1.51274577087903 1.94387554575204 1.77949874740016 1.65319675277297 0.232420372821132 0.227636605097439 0.228655399604895 0.232962107561302 0.235403749322561 0.230292755265731 0.232762441211534 0.231843595642111 0.240574293220334 0.230203174010771 0.229727949048662 0.226583522203022 0.240850231906193 0.230868769230558 0.234266000808509 0.222730836647336 0.229381441671559 0.236053001119156 0.225597513932606 5 5 + 8402391 8403035 8402800.364 8402208 8403269 + gene protein_coding_gene TRUE TRUE AT5G24560.1 ATPP2-B12 (Phloem protein 2-B12) similar to ATPP2-B1 (Phloem protein 2-B1) [Arabidopsis thaliana] (TAIR:AT2G02230.1); similar to Cyclin-like F-box [Medicago truncatula] (GB:ABE85685.1); contains InterPro domain Cyclin-like F-box; (InterPro:IPR001810) -0.0182932574035188 -0.148879181205201 0.884448450349848 1 0.0563178200318611 3.32671262312161 -0.0182932574035188 0.15259532645485 AT5G25380_at -0.0501534999970266 0.0149084234695180 -0.126527583060618 0.223327014792748 0.221138234881220 -0.0106848021869379 0.419418449506852 -0.0834097705746026 0.184931783697579 -0.312849371785028 0.292380666158845 -0.031587731938749 -0.134336490930671 0.366757842809058 0.458255630061243 0.20851516786578 0.423790597034987 -0.599855245082088 0.103278205049339 0.190351806939716 0.193529598892507 0.194429922223292 0.197006321977044 0.188749592546038 0.194748348623749 0.188749592546038 0.192861369523029 0.189199712166613 0.19590557944495 0.196762971439783 0.193880677749513 0.190071752880421 0.193601543295390 0.201287232168123 0.193510944998163 0.193899283340950 0.194505459839413 0.191913667032615 5 5|0 +|/ 8816366 8817386 8816978.222 8815233 8817569 + gene protein_coding_gene TRUE TRUE AT5G25380.1 CYCA2;1 (CYCLIN A2;1); cyclin-dependent protein kinase regulator core cell cycle genes similar to CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G11300.1); similar to mitotic cyclin a2-type [Glycine max] (GB:BAA09465.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.0157263702554569 0.148602872411465 0.88466118383953 1 0.0562760925387606 0.133390521762860 0.0157263702554569 0.113902238771691 AT5G14980_at 0.603594026672433 0.782178903158088 0.515927113527574 0.73308987277374 0.57363738338136 0.708649954447171 0.564628799669061 0.62273470678685 0.637632734401324 0.65632781172163 0.518100014271929 0.554117355648859 0.703163277878489 0.814344939172471 0.0930474812837743 0.527266188879307 0.609803726501709 0.765640868865725 0.171415172390764 0.182028540213717 0.181395065166627 0.178023228810330 0.182913047661464 0.191783103756504 0.177888851948919 0.190504504622656 0.180827245982654 0.183232846258273 0.183082711377191 0.184580634601427 0.179507209680864 0.182445573319850 0.180184711483858 0.191526575777791 0.17925957412984 0.181324160512022 0.181782954099996 0.196070141972577 5 5 + 4850024 4850545 4850233.091 4849603 4850586 + gene protein_coding_gene TRUE TRUE AT5G14980.1 esterase/lipase/thioesterase family protein similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19290.1); similar to Os01g0317800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042883.1); similar to Os07g0565700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060014.1); similar to Alpha/beta hydrolase [Medicago truncatula] (GB:ABE84979.1); contains InterPro domain Esterase/lipase/thioesterase; (InterPro:IPR000379); contains InterPro domain Alpha/beta hydrolase fold-1; (InterPro:IPR000073); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) -0.0126075634519183 -0.146218579531697 0.886497274379054 1 0.0559192285617529 1.16887712225238 -0.0126075634519183 0.0549041422797106 AT5G43430_at 5.8475284436006 6.6528135454949 6.98651516816281 7.38319628376485 7.09844345516956 6.88609673012849 6.81806306369466 6.96131693229433 6.12907191575175 6.56480483116652 7.89484875696118 8.26582660222289 7.49142656069586 8.02435649024591 7.74289797312006 8.13959900104602 7.66132705939331 7.83481905246206 6.41704635051852 0.186190358557601 0.178729810951133 0.180043370033203 0.182887917319058 0.178398959511353 0.185206097780099 0.174914264251716 0.176979697100222 0.183961161048373 0.183730827840746 0.174921601271209 0.179447382172069 0.177756355478993 0.174914264251716 0.175745639755005 0.174941808111024 0.182290450537516 0.190853690964985 0.181293779375624 5 5|0 +|/ 17471169 17472275 17471709.2 17470826 17472524 + gene protein_coding_gene TRUE TRUE AT5G43430.1|AT5G43430.2|AT5G43430.3 ETFBETA; electron carrier Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation. similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein, beta subunit; (InterPro:IPR012255); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049)|similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049)|similar to electron transfer flavoprotein beta subunit [Oceanicaulis alexandrii HTCC2633] (GB:ZP_00952715.1); similar to Os04g0182800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052183.1); similar to electron transfer flavoprotein, beta subunit [Fulvimarina pela (GB:ZP_01437271.1); contains InterPro domain Electron transfer flavoprotein beta-subunit; (InterPro:IPR000049) -0.0185384274328835 -0.145826402665126 0.886799348269437 1 0.0558610807104558 13.9553443958708 -0.0185384274328835 0.161549360854308 AT5G57760_at 5.11611080640001 5.55267945269051 2.51572913705969 2.45162316365561 3.13251159476295 3.31589188854976 2.68695077924565 2.70323428578542 6.62595995561112 4.60421593686543 9.64861414339643 9.89107965487135 9.58703823948899 8.94556982471082 8.84158573887204 8.91183847184667 7.99281808712204 8.19968634528682 6.50635314649451 0.298851613395314 0.291117582957784 0.305655694581705 0.305295839968509 0.311853692439083 0.305351338894342 0.302324437455548 0.301843082678711 0.305171992418763 0.298840766927591 0.298429936994883 0.302763979839517 0.298329726946797 0.306899623099099 0.300494382342767 0.294313441202116 0.291117582957784 0.29223917638849 0.291117582957784 5 5 + 23417968 23418161 23418062 23417941 23418493 + gene protein_coding_gene TRUE TRUE AT5G57760.1 contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) -0.0137148924030448 -0.145516178922588 0.887038311207515 1 0.05581519415693 10.8915689682802 -0.0137148924030448 0.0827402640935618 AT5G53690_at 1.03740410516405 0.851790327568883 1.68344759062407 1.83167773526001 1.35059197125602 1.34184238794765 1.20379310870281 1.38999218267596 1.8344087340008 1.91296862870233 1.39074103803654 1.61713122414839 1.49445942929661 1.80319509275954 1.35305593973722 1.70558303908316 1.55652663737941 2.36400566798001 1.79686072609318 0.193712889659425 0.204901849547792 0.201706874506377 0.196757193477953 0.190376830924066 0.197085310851072 0.195219342220923 0.191969850392781 0.190097333553201 0.194713662100936 0.206176432084926 0.198480507625447 0.199312496237392 0.19721561186519 0.191755450762746 0.191345272155215 0.198245421488382 0.198299102396958 0.199911736216947 5 5 + 21817714 21817909 21817787.545 21817713 21817943 + gene protein_coding_gene TRUE TRUE AT5G53690.1 unknown protein 0.0124538770882300 0.145490793929016 0.88705786559269 1 0.0558114436580588 3.09065073689229 0.0124538770882300 0.0522531387747764 AT5G15520_at 4.42372150066118 4.77027179097486 5.20027821479473 4.92846566297076 5.34631401353846 5.38490188232145 4.69152954778325 4.9413033166402 4.19234883278448 4.26279838354093 5.64170683117969 6.08389274359873 5.4418394689332 5.4683481206331 5.59159928475798 5.46098588391601 5.37065522935643 5.14536774867565 4.23206534157874 0.229357776994444 0.237601348288832 0.229188993269181 0.238892716562326 0.234958344395408 0.231945700326905 0.228083216240947 0.233509212507613 0.254119394103744 0.237554185936524 0.229183969312102 0.232300456388583 0.243407487935034 0.239202205525908 0.241327857668614 0.228083216240947 0.239574530216499 0.243038111630144 0.244107663612485 5 5|0 -|/ 5037245 5038095 5037614.7 5037024 5038175 - gene protein_coding_gene TRUE TRUE AT5G15520.1 40S ribosomal protein S19 (RPS19B) Identical to 40S ribosomal protein S19-2 (RPS19B) [Arabidopsis Thaliana] (GB:Q9LF30); similar to 40S ribosomal protein S19 (RPS19A) [Arabidopsis thaliana] (TAIR:AT3G02080.1); similar to 40S ribosomal protein S19-like [Solanum tuberosum] (GB:ABB87116.1); contains InterPro domain Ribosomal protein S19e; (InterPro:IPR001266) -0.0139070818852715 -0.144878642343745 0.88752943764438 1 0.0557211987877777 9.83815837446864 -0.0139070818852715 0.0878761846785568 AT5G11560_at 10.1940929902206 10.2545290254227 10.8506881973960 10.8191961062351 10.5237199699044 10.4829546339638 9.8348223580484 9.81413519285936 9.46056730670902 9.72154606816708 10.4161038387702 10.5154791650657 10.2941500597565 10.2170913135225 10.3891372395104 10.2666908535637 10.0651367180494 10.3299103002154 9.70978110709652 0.0748417179977241 0.0736958945061543 0.074980928770081 0.074175430539542 0.0729095474492068 0.0774776691706785 0.074559060335399 0.0793172662239545 0.0882954060033211 0.0799070756420076 0.0755491412638366 0.0745565581746625 0.078678592221268 0.0845146558187 0.0771163852418147 0.074109322580741 0.0817835338590089 0.0777318617275084 0.0752020578403794 5 5|0 -|/ 3709826 3710382 3710025.5 3709482 3714060 - gene protein_coding_gene TRUE TRUE AT5G11560.1 catalytic similar to hypothetical protein LOC419470 [Gallus gallus] (GB:NP_001012856.1); similar to Os05g0230600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054975.1); contains InterPro domain Quinonprotein alcohol dehydrogenase-like; (InterPro:IPR011047); contains InterPro domain Protein of unknown function DUF1620; (InterPro:IPR011678) 0.0115512562008677 0.14471621758183 0.887654569522844 1 0.055697317339467 20.3179392742801 0.0115512562008677 0.0142010702453236 AT5G23770_at 1.87403277181776 1.89952961544572 2.41681893964841 2.22441161189869 2.46398939278922 2.42452975836835 2.03199631086982 1.50101156700332 2.31940424713892 2.49966623536606 2.10402566426935 2.16239344449357 2.05311923150047 2.16109224745168 1.95817851596827 2.38185329316838 2.284028119694 2.40877527141652 2.11571855549419 0.177581034375298 0.186020056929874 0.183185955460988 0.193807091204981 0.182333865762711 0.196863193308988 0.177581034375298 0.182183613174633 0.184471583613074 0.180413660474482 0.185144722882058 0.178322226102215 0.185281984372533 0.177581034375298 0.177581034375298 0.181070311152566 0.190020925941580 0.180982492943411 0.182994118446566 5 5 - 8014520 8015075 8014797.909 8014516 8016274 - gene protein_coding_gene TRUE TRUE AT5G23770.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23780.1); similar to Agenet domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX94920.1); similar to Os11g0302800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067735.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Protein of unknown function DUF724; (InterPro:IPR007930) 0.0144133348897411 0.144631952886479 0.887719488228138 1 0.0556849383402675 4.35492978072766 0.0144133348897411 0.0980736873850765 AT5G20840_at 8.37883160896928 8.18983273684759 9.08194797524184 8.94594579659501 9.4596980186389 8.77902444881283 9.00932070280978 8.49922396341299 8.2038170327189 8.11825299424175 9.26292092342264 9.1606453440905 9.39646251538862 9.4705473900949 8.88506821407223 9.29996646129716 8.93777879894756 9.38613617816029 8.25290062645072 0.136515757466814 0.131109934041751 0.130901570530077 0.128753131301057 0.130624986371859 0.133518244179546 0.128911736816123 0.129189941554097 0.139027532530698 0.138959526488248 0.130476512195472 0.131099607972948 0.127371633889190 0.134872009971087 0.129611750947803 0.132178694005223 0.156822152404974 0.131500077251791 0.144977412156017 5 5|0 -|/ 7061641 7063271 7062487.2 7061105 7069221 - gene protein_coding_gene TRUE TRUE AT5G20840.1 phosphoinositide phosphatase family protein similar to ATSAC1 (SUPPRESSOR OF ACTIN 1), phosphoinositide 5-phosphatase [Arabidopsis thaliana] (TAIR:AT1G22620.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G43220.1); similar to phosphoinositide phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G14205.1); similar to Os03g0182400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049173.1); similar to Putative phosphoinositide phosphatase [Oryza sativa] (GB:AAK92639.1); similar to SacIy domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94324.1); contains InterPro domain Synaptojanin, N-terminal; (InterPro:IPR002013) -0.0177620193885413 -0.14454462181274 0.887786770226432 1 0.0556721164476174 17.5012769627434 -0.0177620193885413 0.1526154116078 AT5G02350_at 1.65476358166829 0.961070467511436 1.6624256891804 1.66742045121933 1.28468601604697 1.47372432353596 1.38324663206299 1.21313115792481 1.53465470680654 1.46650285809137 1.74600768140989 1.43446291338587 1.57398021572401 1.39393932942976 1.5891315349706 1.43945062889853 2.21773960614489 1.66079529742453 1.81657642617911 0.171726384750593 0.167763338658522 0.165657355545779 0.172304440953374 0.164479858777319 0.168330245110300 0.166833920115369 0.171180656729022 0.170869473543674 0.173323697758350 0.168380056055097 0.165982969829310 0.167031291099523 0.165568988869274 0.167237142446334 0.168142324508865 0.175663283586706 0.175822049934610 0.170091473552736 5 5 - 495460 495880 495747.545 495309 497264 - gene protein_coding_gene TRUE TRUE AT5G02350.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G02340.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G13900.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G02330.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.0161249558994553 0.144367280729665 0.887923400994902 1 0.0556461030730055 3.03148340553503 0.0161249558994553 0.127862670124189 AT5G08320_at 5.99658989402076 6.46241048074733 6.55854109162368 6.73188033581513 7.52855090082951 7.0844034105735 5.928566748952 6.11532482268019 5.54022901647857 5.82512001123531 7.22053976572412 7.26824961366336 6.7724608254654 7.15261183434487 6.42759243393043 6.87448119775218 6.87532834300248 6.78364058762426 5.58035714473460 0.206479061679152 0.209622307936242 0.216532269490540 0.223413260744595 0.212870290360394 0.216439025101097 0.206944764330467 0.219633201339698 0.226705243157593 0.223678357458385 0.216446281248724 0.204278444596062 0.216548376455177 0.209882977846771 0.220431195096392 0.210589069883558 0.210884379910798 0.207797927950143 0.221735731346813 5 5|0 +|/ 2677157 2678579 2678042 2677053 2678679 + gene protein_coding_gene TRUE TRUE AT5G08320.1 similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25105.1); contains domain gb def: Hypothetical protein F8L15_50 (PTHR15967:SF3); contains domain FAMILY NOT NAMED (PTHR15967) 0.0156069022822432 0.144162270114356 0.88808135425578 1 0.0556160706084338 12.8359993603242 0.0156069022822432 0.119793443794967 AT5G40100_at 1.08801175605456 1.59957163436567 1.23420477558847 1.81039909737165 1.40823286830031 1.24828027429933 1.35547085004922 1.55931082622118 1.60350133672268 1.85081803671447 1.59419948812142 1.42484987818764 1.61053687581932 1.95011540258838 2.14745507243624 1.45235316598901 2.06652823950558 2.14329019197934 1.4487119239459 0.186302785408309 0.188864925112796 0.197243615044322 0.187678222370012 0.187644077884720 0.191084993804267 0.184301355823207 0.181086587020222 0.186886327126830 0.185030521144396 0.182075332000336 0.182693353755513 0.188594383177770 0.179845248356935 0.188428046337189 0.179845248356935 0.179845248356935 0.193057752945546 0.181743101384553 5 5 + 16063954 16064554 16064242.273 16061157 16064583 + gene protein_coding_gene TRUE TRUE AT5G40100.1 disease resistance protein (TIR-NBS-LRR class), putative similar to ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G72840.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G17600.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G48770.1); similar to N-like protein [Nicotiana tabacum] (GB:AAT37497.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0168529360395357 -0.143583467415862 0.888527328290837 1 0.0555315098792556 3.12944016284266 -0.0168529360395357 0.140678537941192 AT5G04490_at 10.0274259301428 10.0307749238426 10.8216480238297 10.743881416088 11.1570461544994 10.8554519398149 10.4000870795254 10.2582767589476 10.7250780977965 10.4854167567335 11.2548367384306 11.0793781955682 10.9801943595471 11.0309614503689 10.7850533049155 11.0631279013955 10.5698080521188 11.0213416601675 10.2676972706042 0.0899211531127977 0.0878897707664523 0.0913665641935032 0.0875035881541395 0.0867020778274339 0.0976924940665744 0.0846467209695204 0.0912931804241138 0.102123378084943 0.0872813785476581 0.085662071324894 0.0842132113543847 0.0842279414661852 0.0925265042427286 0.0872814293955673 0.0842132113543847 0.113038674091392 0.0898341264896205 0.0899510678070318 5 5|0 +|/ 1280600 1281526 1281229.222 1279761 1281670 + gene protein_coding_gene TRUE TRUE AT5G04490.1 VTE5 (VITAMIN E PATHWAY GENE5); phosphatidate cytidylyltransferase/ phytol kinase Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis. Identical to Phytol kinase 1, chloroplast precursor (EC 2.7.-.-) (Vitamin E pathway gene 5 protein) (VTE5) [Arabidopsis Thaliana] (GB:Q9LZ76;GB:Q84WC0;GB:Q8LF61); similar to phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G58560.1); similar to Probable phytol kinase 1, chloroplast precursor (GB:Q2N2K1); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) -0.0124359864872423 -0.142453196292422 0.889398331580365 1 0.0553673585706903 21.2697332364324 -0.0124359864872423 0.0592261980036549 AT5G41730_at 1.38754963049083 1.48492904483563 1.94791384956692 2.19105699513699 1.09962066575510 1.41372625253967 1.18993130056971 1.57966184927358 1.44367660496531 1.27834995952223 1.35095154620732 1.41588229263888 1.28067115561212 1.38905736875815 1.39236599763014 1.53304999036247 1.77021613215239 1.56101528689838 1.70501197411026 0.199141561399056 0.188976135791870 0.1895916465393 0.195998336529964 0.194775796715796 0.191444650283045 0.190226462048966 0.191939262275178 0.202100402214186 0.18952127030552 0.200942114465866 0.190223015431344 0.190339470826503 0.191467425786328 0.191884813136968 0.189954641812202 0.190179669931011 0.202958744865323 0.192502918918765 5 5 - 16702152 16702805 16702517.636 16702142 16704373 - gene protein_coding_gene TRUE TRUE AT5G41730.1 protein kinase family protein similar to kinase [Arabidopsis thaliana] (TAIR:AT1G64300.2); similar to Os05g0585800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056458.1); similar to Light-sensor Protein kinase [Includes: Phytochrome; Protein kinase ] (GB:P25848); similar to Os01g0621600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043605.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein of unknown function DUF1221; (InterPro:IPR010632); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.0141688410646885 0.142342460871526 0.88948367415859 1 0.0553513457545846 3.00546406559526 0.0141688410646885 0.0977649436828134 AT5G58210_at 3.10138585465782 3.12913010391116 4.0219678540704 4.05999390704163 4.03033251908984 3.68341932392809 3.17659699906129 3.39335730316970 3.00238794652644 3.38813035311978 3.66270406699195 3.42961776886993 3.77834379426448 3.39976989454320 3.66045585659986 3.87999701042980 3.55891694694108 2.93234051565471 3.05258157965046 0.201389610225753 0.193531557750917 0.201488971526679 0.200944949079626 0.206938998829513 0.205244781628571 0.199880111256533 0.195375095633174 0.204953958572696 0.207023177637885 0.206915353854370 0.199834309829162 0.194492486143251 0.198634695507368 0.196478150417991 0.199275066512284 0.200323103826778 0.205475169716430 0.199172163322969 5 5|0 +|/ 23570442 23571206 23570809.556 23569320 23571628 + gene protein_coding_gene TRUE TRUE AT5G58210.1|AT5G58210.2|AT5G58210.3|AT5G58210.4 hydroxyproline-rich glycoprotein family protein similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G52170.1); similar to hypothetical protein MtrDRAFT_AC138580g22v1 [Medicago truncatula] (GB:ABE81148.1) -0.0127611001892163 -0.140797797644024 0.890674281938275 1 0.0551292739068871 6.91725707889246 -0.0127611001892163 0.0712576652051094 AT5G59140_at 9.64221386227236 9.52683890751498 10.2857501099605 10.2785679203665 10.5234765876771 10.1512699146861 9.26315655926082 9.20164210562892 9.23539492732514 8.42367244027484 9.22960708661769 9.24604682949336 9.231951588139 9.40975489188988 9.08863112093551 9.4573952832367 8.96444695845354 9.35089771998723 8.51544906515845 0.0968431402050822 0.0946280461041738 0.0971232957247255 0.0957072420725278 0.0953387690768098 0.0971098708166999 0.0996530780617986 0.0954484204447458 0.0962360694870167 0.100101163179191 0.0978622711857412 0.094537944325677 0.100195402836783 0.0943760664966525 0.0996661515030938 0.0950768294200425 0.104714927485345 0.0963946505211208 0.107137725942739 5 5|0 -|/ 23891933 23892804 23892472.889 23891637 23892921 - gene protein_coding_gene TRUE TRUE AT5G59140.1 SKP1 family protein similar to Os11g0707700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068558.1); similar to elongation factor SIII p15 subunit, putative [Aedes aegypti] (GB:EAT43917.1); similar to Hypothetical protein CBG11707 [Caenorhabditis briggsae] (GB:CAE66436.1); contains InterPro domain SKP1 component; (InterPro:IPR001232) -0.0125580828600786 -0.139900948066158 0.891365692785488 1 0.0550014437671694 18.8452046188027 -0.0125580828600786 0.0682820283853322 AT5G63080_at 5.78752526818223 6.06627629353732 6.45254651949026 7.06147639986638 7.43074393005547 5.76528703146382 5.2028147436791 4.92715975482271 5.45083089959026 4.99097216315148 6.32658619905177 6.23430032444947 5.77663057951049 6.5983939215707 5.30761135943644 6.20726443053299 5.39718199854598 6.27017206697688 4.88446802185362 0.232812929419883 0.228861796675241 0.256784771550112 0.228139044160172 0.227930494795082 0.250319579077262 0.227485624255125 0.225934204475235 0.241089638812247 0.255831535386963 0.227734511814292 0.22368289610608 0.22368289610608 0.238712696962659 0.234820258588939 0.225764017797253 0.239870007490225 0.228553946825363 0.228741894559683 5 5|0 -|/ 25317271 25318122 25317592.4 25317161 25319670 - gene protein_coding_gene TRUE TRUE AT5G63080.1 transcription factor jumonji (jmjC) domain-containing protein similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G78280.1); similar to Transcription factor jumonji, jmjC [Medicago truncatula] (GB:ABE79698.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347) 0.0291366099060452 0.139481376433758 0.891689186940314 1 0.054941920560774 11.6484910617411 0.0291366099060452 0.314285093190774 AT5G40930_at 8.79710628409468 9.03122361342182 9.91193032350713 9.79881136481462 9.75301960255875 9.40960866789319 9.14346587281928 9.10235223969559 8.07771856655914 8.41064148495744 9.02849458091024 9.04765316808915 9.24568700359778 9.10818835880396 9.01922251529473 8.96080492385912 8.87078040201373 8.82511669909781 8.06842145384548 0.158125447765451 0.1525690243715 0.147508401898147 0.157203360317176 0.153761655604197 0.150981061290288 0.153780642075948 0.153440491704192 0.159193975675140 0.158722985823012 0.150082252446785 0.147508401898147 0.149148083385149 0.153187782262831 0.154503676032237 0.156165501440132 0.158996776691304 0.158385412697549 0.158174054378295 5 5|0 +|/ 16421776 16423028 16422547.9 16421685 16423230 + gene protein_coding_gene TRUE TRUE AT5G40930.1 TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4) Form of TOM20, which is a component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins Identical to Mitochondrial import receptor subunit TOM20-4 (Translocase of outer membrane 20 kDa subunit 4) (TOM20-4) [Arabidopsis Thaliana] (GB:P82805); similar to TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3), protein translocase [Arabidopsis thaliana] (TAIR:AT3G27080.1); similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit) (GB:P92792); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.0127821953060390 -0.139343194917437 0.89179573087777 1 0.0549223561989422 17.9678583918901 -0.0127821953060390 0.074880539778539 AT5G48280_at 1.05821946802307 1.51110346041551 1.64124011118765 1.97692546064023 1.24626379409497 1.26986843273347 1.24888387212302 1.64993712678834 0.894987967319381 1.95907771337433 1.52099096554282 1.50194282537479 1.64198526183297 1.55368220891097 1.16337045143731 1.51030507693710 1.29172808792245 1.69099625350994 1.58034196755368 0.181220605579 0.181271126332133 0.189907943852702 0.188982290954028 0.176490060766245 0.179043867508782 0.182739326740319 0.176490060766245 0.178708938963730 0.185816358913498 0.188449726817198 0.181373921959380 0.185706301286310 0.185168104148403 0.177345609040348 0.176490060766245 0.19712089316214 0.187026462679126 0.186054212300381 5 0|5 /|- 19584290 19584518 19584411.5 19584290 19584914 - gene protein_coding_gene TRUE TRUE AT5G48280.1 unknown protein -0.0150464032745830 -0.138984318126217 0.892072450900304 1 0.0548716350320682 2.93156072784212 -0.0150464032745830 0.119794515355127 AT5G14540_at 5.84307152576964 6.00780360015684 6.73758725842237 7.19708702804962 8.00533668228208 7.41851970743084 6.26623620594262 5.52445784678295 7.04461515183294 6.46886105455995 7.42861733070243 6.86245061344341 7.25585609092951 7.37149479095298 7.11663525622623 7.58926537512745 6.87746996403984 7.52946068046346 6.40214042157762 0.176375344103416 0.172966773304938 0.195990012277308 0.179313123923082 0.197466895309937 0.186337771816936 0.179112488818758 0.186853958994604 0.174932287397687 0.173663690486422 0.182366316075572 0.179346259585794 0.172008344189526 0.191732979152908 0.18698439397617 0.174081968816235 0.184580979018092 0.175445284656917 0.182895555856236 5 5 - 4687522 4687817 4687681.091 4687150 4689677 - gene protein_coding_gene TRUE TRUE AT5G14540.1 proline-rich family protein similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G01560.1); similar to vegetative cell wall protein gp1 -like [Oryza sativa (japonica cultivar-group)] (GB:BAD68319.1); similar to Os01g0169900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042136.1); contains InterPro domain RuvA-like, C-terminal; (InterPro:IPR011132); contains InterPro domain Protein of unknown function DUF1421; (InterPro:IPR010820); contains InterPro domain Ubiquitin-associated; (InterPro:IPR000449) -0.0191436331589419 -0.138443120364419 0.892489782113293 1 0.0547953922718949 13.5712350512175 -0.0191436331589419 0.184192769359443 AT5G12370_at 7.67186573686866 7.87499802767017 8.12608179541909 8.15907790890069 8.36711328352077 8.31712220706972 7.04886884548087 7.21856375501157 7.53985202047849 7.38643993170615 8.87169517711868 8.70481505155496 8.557430075846 8.52462980680569 8.35364601647313 8.4566851445913 8.2208004025599 8.41597900119941 7.47357973248526 0.139117113954823 0.133384473904935 0.144327539311742 0.133589643602229 0.135139535890525 0.140544075223791 0.142436209088088 0.145677164432207 0.148251418861385 0.138505673377946 0.132783974905847 0.135427068022563 0.137714435882341 0.147373879838838 0.147859149323861 0.133123525581061 0.137492270951243 0.143440603796058 0.136436563340952 5 5|0 -|/ 4003017 4004674 4003917.6 4002776 4008805 - gene protein_coding_gene TRUE TRUE AT5G12370.1|AT5G12370.2|AT5G12370.3 SEC10 (EXOCYST COMPLEX COMPONENT SEC10) Identical to Exocyst complex component 5 (Exocyst complex component Sec10) (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q94CK5); similar to Os12g0238100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066469.1); similar to Exocyst complex component Sec10, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21938.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE92636.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976); contains InterPro domain t-snare; (InterPro:IPR010989)|Identical to Exocyst complex component 5 (Exocyst complex component Sec10) (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q94CK5); similar to Os12g0238100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066469.1); similar to Exocyst complex component Sec10, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG21938.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE92636.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976) -0.0115328933524084 -0.136593523479935 0.893916309913701 1 0.0545370620012124 15.837878434697 -0.0115328933524084 0.0469635226033219 AT5G63650_at 2.00224947133625 2.75300367713391 1.99743106623928 1.92666192886747 2.06307943271640 2.00231654363552 1.66039340121704 1.96328723281618 2.2369517792601 1.87540475923959 3.08785991854446 3.22322330282095 2.74825135245638 2.36602370200656 3.45402310503405 2.98582960009254 1.99530991368028 2.64330708693082 2.58323805925286 0.195329656016856 0.194264679481494 0.200029123514129 0.195310098130798 0.201215610143045 0.203897447015507 0.197677322370002 0.197518836426395 0.201546744054564 0.201341711828147 0.192705769991427 0.192705769991427 0.198969111393176 0.194834458254300 0.193436884937507 0.194870495251783 0.207228044338887 0.192705769991427 0.206727693764162 5 5 - 25498867 25499686 25499257.636 25498743 25500945 - gene protein_coding_gene TRUE TRUE AT5G63650.1 SNRK2-5/SNRK2.5/SRK2H (SNF1-RELATED PROTEIN KINASE 2-5, SNF1-RELATED PROTEIN KINASE 2.5); kinase encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. similar to ASK2 (ARABIDOPSIS SERINE/THREONINE KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G08590.1); similar to osmotic stress-activated protein kinase [Nicotiana tabacum] (GB:AAL89456.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) 0.0159246044765874 0.135493570687075 0.89476485116609 1 0.0543850746797312 4.56847452605189 0.0159246044765874 0.141023831907825 AT5G36930_at 7.24631774510222 7.42056592078765 7.85704132486127 8.12645901172903 8.00852762712815 7.38542970860703 5.46671847591622 4.75569871093845 5.91055841557795 4.67752877376642 5.71923676635474 6.01922955811222 5.13905414319287 5.83531671110301 4.65477074492425 5.95698752616775 6.34740882560475 5.40450820895502 5.03494287296727 0.224029829559098 0.219847292754331 0.226484787033963 0.219847292754331 0.226366193373337 0.232369807853574 0.228834682227228 0.221741305687207 0.229375556824225 0.223800640087991 0.229275868729834 0.228957688931988 0.230583953171739 0.236051731876332 0.231311249864730 0.219847292754331 0.226138634508705 0.230683114040694 0.232203397210517 5 5|0 -|/ 14585382 14585812 14585657.222 14584881 14589845 - gene protein_coding_gene TRUE TRUE AT5G36930.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G17680.1); similar to TIR-NBS type disease resistance protein [Populus trichocarpa] (GB:ABF81459.1); similar to TIR-NBS disease resistance-like protein [Populus trichocarpa] (GB:ABB82027.1); similar to TIR-NBS disease resistance-like protein [Populus trichocarpa] (GB:ABB82031.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991) -0.0179072963641282 -0.135059103006026 0.895100052545278 1 0.0543253788739233 12.4544651896283 -0.0179072963641282 0.172773085832953 AT5G16930_at 2.54029922919535 2.40682406155664 2.83456437099122 2.83620851367443 2.71370821782427 2.37703603651676 2.37120857303439 2.10135831586131 2.3998648565391 2.25440649853923 2.52476147679795 2.45549678014254 2.42431058848946 2.15745252898193 2.81847854617937 2.36528240613470 2.55139587633797 2.57879808447062 2.26953050480754 0.225074195615429 0.225515709590122 0.227124548581768 0.222101330474706 0.222102933993288 0.224860068565651 0.226863739568269 0.220147107141097 0.231909768521164 0.221870123160915 0.2202588703325 0.220039181715338 0.223333921030620 0.219684882578001 0.223146485745499 0.219684882578001 0.225758011758737 0.223344650935074 0.220549815722440 5 0|5 /|+ 5571080 5571421 5571199.2 5568396 5571862 + gene protein_coding_gene TRUE TRUE AT5G16930.1 AAA-type ATPase family protein similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G36580.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT2G18330.1); similar to ATPase [Arabidopsis thaliana] (TAIR:AT3G03060.1); similar to Os02g0697600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047821.1); similar to Os02g0706500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047871.1); similar to putative AAA-type ATPase [Oryza sativa (japonica cultivar-group)] (GB:AAL87170.1); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region; (InterPro:IPR003959) -0.0124998074229010 -0.134754155232709 0.895335339305095 1 0.054283593177187 4.91886640945035 -0.0124998074229010 0.0781597404301379 AT5G66985_at 1.51750484171968 1.92595846038806 1.85142036511119 1.80837782297244 1.54127556183189 1.78012480663247 1.64780912746208 1.54323234538130 1.4238873071337 1.47282295501246 2.0151355082966 1.35306485525845 1.83849625368636 1.73139681874274 1.70421335747856 2.02039826140722 1.79111151708478 1.81408524112940 2.02534650057036 0.184221017491242 0.184986426289931 0.193965746183344 0.193721827370759 0.18645928966035 0.191905918406851 0.192968968420181 0.185208840964547 0.193682017860627 0.19054376208121 0.194563667604295 0.190035678576998 0.187282940334502 0.188898355455764 0.189161496635042 0.185099949435242 0.185614564373640 0.191865970646709 0.190906681029947 5 5 + 26760640 26760857 26760756.091 26760505 26761034 + gene protein_coding_gene TRUE TRUE AT5G66985.1 unknown protein -0.0127298862193444 -0.134375301980862 0.89562766359299 1 0.0542318116100273 3.41404957354123 -0.0127298862193444 0.0841893214274348 AT5G37240_at 1.56462724628819 1.62968185502742 1.89261075396367 1.60843027598840 1.37723837489855 1.55790344301578 1.50434334537146 1.70165053273447 1.68111352943786 1.74291554401367 1.70885642620833 1.91595812967490 1.69064564334369 1.82711077965883 1.96838177553367 2.08105467637161 1.90570318398913 1.90915926275380 1.55364143150189 0.196486108320701 0.195289744359759 0.205006502768226 0.204466484310969 0.201526647327307 0.204703045261628 0.202086943121176 0.204496735799905 0.209796532180441 0.198233891369682 0.196751232781387 0.199124128134773 0.201801318635234 0.201985483363321 0.201891464571652 0.204517338043802 0.202695037041593 0.199478687916107 0.195547808294538 5 0|5 /|- 14754981 14759652 14756437.889 14754975 14760710 - gene protein_coding_gene TRUE TRUE AT5G37240.1 unknown protein -0.0120596773522216 -0.134265965735814 0.895712030788136 1 0.0542168945685096 3.37210184658243 -0.0120596773522216 0.0684738269424354 AT5G23440_at 8.41337441131643 8.50885881612042 9.16871566349663 9.13938332031516 9.32703285504843 8.87009316017785 8.99021366710764 8.75431449902155 8.4044398322388 8.3757951172487 9.71695607327804 9.39208744631788 9.42183854531112 9.48533856398344 9.32463046763379 9.5988495848979 9.3057494715173 9.26100887979826 8.26067419019932 0.139281702078434 0.14008460493155 0.138135873307248 0.133020604411672 0.129856986770226 0.137097218509136 0.132514992321674 0.138310131667214 0.147152602370382 0.139956400247763 0.143282549340518 0.134839488746035 0.129856986770226 0.138208921619662 0.138819325923415 0.131757713882385 0.136505482393881 0.139636252385002 0.139703738051302 5 5 - 7903277 7903755 7903521.727 7903048 7903848 - gene protein_coding_gene TRUE TRUE AT5G23440.1 FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1); ferredoxin:thioredoxin reductase similar to FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2), ferredoxin:thioredoxin reductase [Arabidopsis thaliana] (TAIR:AT5G08410.1); similar to Os02g0638300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047533.1); similar to ferredoxin-thioredoxin reductase SU A [Spinacia oleracea] (GB:CAA54407.1); contains InterPro domain Ferredoxin thioredoxin reductase, alpha chain; (InterPro:IPR004207); contains InterPro domain Electron transport accessory protein; (InterPro:IPR008990) -0.0129957305173778 -0.134027469789629 0.895896066258264 1 0.0541843978947041 17.7891368452361 -0.0129957305173778 0.0906548735525207 AT5G13970_at 5.95486978499368 6.9413652471886 7.64862865856723 7.61226726276542 8.167374342182 7.98203549373297 6.7961582603832 6.58267751854144 6.11398935296289 5.8129352548067 6.62743933475906 6.94013193051507 6.55616129429002 7.00170862616363 6.43711611861203 6.92073131139964 6.97088397653543 6.30428741511596 5.72154964995787 0.222126338507823 0.212465318495815 0.216795715005507 0.216276664724900 0.228542526314736 0.229601451703124 0.222180391252671 0.213882243341456 0.219951878760622 0.228840597860740 0.215980173805021 0.212465318495815 0.215206042729853 0.215688405233947 0.214118896940904 0.212768307741229 0.219527259138527 0.222528795391299 0.223849517537554 5 5 - 4506404 4506950 4506651.364 4506234 4507844 - gene protein_coding_gene TRUE TRUE AT5G13970.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13310.1); similar to OSJNBa0039C07.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE05150.2); similar to hypothetical protein MA4_111B14.56 [Musa acuminata] (GB:ABF72009.1) 0.0180555166349439 0.133716449122394 0.896136075107024 1 0.0541421057259166 13.5119881977942 0.0180555166349439 0.177701100759317 AT5G42740_at 8.08836226430502 7.9491318578994 8.74163618207547 8.83108588482164 8.60168382198486 8.15751218017945 8.56031948114981 8.6355043124617 6.8564662053046 7.3037849060027 8.37694265218236 8.98540776952287 8.53663323715403 8.36046974895136 9.19266703503185 8.43472018116086 8.6911804705801 8.75428981872422 7.25267627529734 0.156065195190567 0.156761975077808 0.158020432115143 0.153074158745532 0.159618511409478 0.159081556651197 0.162809067905901 0.155988813618163 0.183132604604996 0.171629401128591 0.158954107143526 0.156801040543581 0.153074158745532 0.165470494677871 0.157549943912641 0.155451908168252 0.158256541300563 0.153074158745532 0.174721147935297 5 5|0 +|/ 17156689 17157710 17157123.125 17152987 17158120 + gene protein_coding_gene TRUE TRUE AT5G42740.1 glucose-6-phosphate isomerase, cytosolic (PGIC) Identical to Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (PGIC) [Arabidopsis Thaliana] (GB:Q9FXN0;GB:Q9FXN1;GB:Q9FXN2;GB:Q9FXN3;GB:Q9FXN4;GB:Q9FXN5); similar to PGI1 (CHLOROPLASTIC PHOSPHOGLUCOSE ISOMERASE) [Arabidopsis thaliana] (TAIR:AT4G24620.2); similar to cytosolic phosphoglucose isomerase [Arabis gemmifera] (GB:BAC77708.1); similar to cytosolic phosphoglucose isomerase [Arabis gemmifera] (GB:BAC77720.1); similar to Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (GB:Q9FXM5); contains InterPro domain Phosphoglucose isomerase (PGI); (InterPro:IPR001672) 0.0126141083695674 0.133689264286741 0.896157053656415 1 0.0541384138213037 16.3477451612922 0.0126141083695674 0.0830531794804667 AT5G58780_at 0.899822911021542 0.610422672381061 0.991369184347043 0.712070380325817 0.69399806259981 1.13146443201042 0.85747263208131 0.846311141383371 0.913203666507416 0.92629338107378 0.938617573749809 0.712840473526387 0.993642777420991 0.733330164357723 0.889245516188407 1.06204609267980 1.10927719654521 1.82974268598893 1.04660274928122 0.185986826091486 0.188112879330748 0.19660508597669 0.189299034376007 0.192478873646877 0.18687586632841 0.197007068364854 0.189154844870664 0.201173724591725 0.190082786976383 0.195331694269233 0.191580377002865 0.194263145025038 0.187633202286396 0.190761974973069 0.188852248765968 0.186467005038873 0.192205510152996 0.197786628048921 5 5 - 23753080 23753707 23753443.364 23752855 23754561 - gene protein_coding_gene TRUE TRUE AT5G58780.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative Identical to Dehydrodolichyl diphosphate synthase 3 (EC 2.5.1.-) (Dedol-PP synthase 3) [Arabidopsis Thaliana] (GB:Q8RX73;GB:Q9LUY3); similar to ACPT (ARABIDOPSIS CIS-PRENYLTRANSFERASE), dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] (TAIR:AT2G23410.1); similar to Undecaprenyl pyrophosphate synthase [Flavobacterium sp. MED217] (GB:ZP_01059274.1); similar to Os01g0857200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044851.1); contains InterPro domain Di-trans-poly-cis-decaprenylcistransferase; (InterPro:IPR001441) 0.0134133377944150 0.132201037086702 0.897305645892227 1 0.0539374427028294 1.84067946485778 0.0134133377944150 0.102856466256110 AT5G38450_at 0.72267988390624 0.565693105599632 0.668000483970316 0.579095733279593 0.324539895693356 0.868572583021692 0.583610052407624 0.957358354401307 0.227516182669387 0.660306647382753 0.908116442189229 0.219657267701713 0.434918024379023 0.615055420222801 0.895905679924283 0.252369879645624 0.63254762308014 0.0641836413659229 0.120951995578129 0.240125464453575 0.240285089966142 0.237890294041856 0.244547617498107 0.239390508485690 0.238647950155777 0.243438134143102 0.240311827511524 0.246405596399932 0.247706115140441 0.237890294041856 0.242587740552612 0.239089826568611 0.237890294041856 0.239049093435129 0.242669033346093 0.242929841854267 0.24561627019755 0.239533848208168 5 5 - 15411287 15412878 15412072.182 15410984 15414509 - gene protein_coding_gene TRUE TRUE AT5G38450.1 CYP735A1 (cytochrome P450, family 735, subfamily A, polypeptide 1); oxygen binding member of CYP709A similar to CYP735A2 (cytochrome P450, family 735, subfamily A, polypeptide 2), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G67110.1); similar to putative cytochrome P450 monooxygenase CYP72A5 [Oryza sativa (japonica cultivar-group)] (GB:BAD36323.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0142077536002442 -0.131939325183420 0.897507656965229 1 0.0539023327412138 1.07824502279681 -0.0142077536002442 0.118413943412727 AT5G06000_at 2.68838765457879 2.75610066535330 3.14235235947381 3.1218485190854 3.03507240473962 2.84729795242702 2.93347750779792 2.88937025213559 2.66838901217058 2.57084139382017 3.21125678236051 3.72104302780358 3.4465279040096 3.2566687913567 3.74207986645507 3.40276072850273 2.74956823941459 3.3201168675578 2.86617444310566 0.214339522913451 0.214420232764295 0.220521148025038 0.217826180023470 0.234429055721312 0.236533792456168 0.220440592989527 0.226339920147851 0.234005102728679 0.215711750598440 0.212590859657437 0.218673829802830 0.214099105141706 0.220755717034569 0.21991377166085 0.215516328166984 0.229877720413968 0.222306583896829 0.217862597045069 5 5 + 1809151 1809680 1809378 1808171 1809854 + gene protein_coding_gene TRUE TRUE AT5G06000.1 EIF3G2 (eukaryotic translation initiation factor 3G2); RNA binding / translation initiation factor One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). similar to EIF3G1 (eukaryotic translation initiation factor 3G1), RNA binding / translation initiation factor [Arabidopsis thaliana] (TAIR:AT3G11400.1); similar to RNA-binding re (GB:ABE81433.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.0108095444332429 0.131347111703589 0.897964804833918 1 0.0538231402835748 5.95576561059795 0.0108095444332429 0.0355542709351776 AT5G49250_at -0.000532868001247052 0.473526868501477 0.258129508843815 0.0551931577092068 0.318292959318131 0.240581353909137 0.641196007848261 -0.134521282686314 0.192689764308558 0.298037814048406 -0.0135261652947905 0.120365770721156 0.441816530462062 0.414620834336023 0.205140209910633 0.773834985912197 0.183028568398214 0.397761466301484 -0.0109505157755561 0.245230441258393 0.246731151063585 0.251349083010994 0.246423233151260 0.240409490453449 0.248745504781006 0.240312429795945 0.244515872878786 0.251296734584241 0.245485188352463 0.243562479480111 0.249478280747192 0.249824341455168 0.239166381147857 0.244543359548782 0.239166381147857 0.247198899560198 0.257100410667027 0.245458608956542 5 5 + 19982574 19983061 19982840.6 19982569 19983171 + gene protein_coding_gene TRUE TRUE AT5G49250.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29200.1); contains domain BETA-GALACTOSIDASE RELATED (PTHR23421); contains domain BETA-GALACTOSIDASE (PTHR23421:SF2) 0.0166169103010469 0.130609015534756 0.89853461843025 1 0.053724936952886 0.469136194490562 0.0166169103010469 0.161756796897988 AT5G66670_at 0.803082760332793 1.15850617133044 1.15185171066374 1.12522998481776 1.32587891272778 1.07870978454689 1.05170465739924 1.10719346232083 1.29708535644206 1.52110240700810 1.46707728306130 1.56815731283389 1.75405501184658 1.31071381805459 0.984378956270172 1.32375443740159 1.75198385884992 1.44530818620123 1.38394986951116 0.181946010729615 0.185652626717868 0.185838854671421 0.186098311035396 0.182145083937901 0.188511355627144 0.183796828752147 0.181946010729615 0.181946010729615 0.190977903716466 0.181946010729615 0.186085673388897 0.186183346027179 0.185470567447102 0.184277735835631 0.182353411861543 0.192410771576899 0.185706108045379 0.186223797538774 5 5 - 26628737 26629195 26629000.091 26628484 26630115 - gene protein_coding_gene TRUE TRUE AT5G66670.1|AT5G66670.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66660.1); similar to Protein of unknown function DUF677 [Medicago truncatula] (GB:ABE78510.1); contains InterPro domain Protein of unknown function DUF677; (InterPro:IPR007749) 0.0118562839603941 0.128905019540524 0.89985033979246 1 0.0535003274821421 2.52596525671011 0.0118562839603941 0.0756718205932729 AT5G42490_at 1.24922398747140 0.68850087475284 1.35904637656282 1.52187972111143 0.708213527506967 1.01146083443003 0.909949470778291 0.94255127613581 1.31415611045518 0.900434453829103 0.881216397286614 1.03657969529361 0.770874655465969 1.06479976461670 0.77978077177164 0.858658154423299 1.28396547891094 1.26300278695580 1.03958431599222 0.219524900134697 0.219524900134697 0.226639546201582 0.219524900134697 0.222094090574616 0.226544046631951 0.219524900134697 0.22070031295144 0.234389267761647 0.220657510832287 0.228579015264635 0.22134850547856 0.233433927899765 0.228391063117032 0.225815192909071 0.219524900134697 0.224156931424354 0.220036913513484 0.235245071980376 5 5 - 17005841 17006494 17006164.636 17005837 17009850 - gene protein_coding_gene TRUE TRUE AT5G42490.1 kinesin motor family protein similar to kinesin motor family protein [Arabidopsis thaliana] (TAIR:AT5G66310.1); similar to Kinesin motor domain, putative [Medicago truncatula] (GB:ABE89357.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) -0.0133309878152734 -0.125921304445023 0.902154940169032 1 0.053114114684213 2.08739559518507 -0.0133309878152734 0.113999149213026 AT5G26980_at 3.2783597830003 3.2542581453822 4.14315459846702 4.27667068219938 4.44292813889865 3.67736636353389 3.04326592843451 2.88156346071874 3.5060712200826 3.6653509323976 4.18323243078961 4.06444791589011 3.93147539941779 4.01146094646227 3.8741155482206 4.21090997589135 3.89106297437466 3.99911593022232 3.9823537302684 0.208448974321446 0.207134129894488 0.210506947848292 0.208673788448771 0.204967977346111 0.226733186932949 0.214846071657018 0.210704299250919 0.219933981001385 0.216754995737980 0.207475007541418 0.219030905442594 0.218814236953635 0.216942175060250 0.224163654759004 0.210549941121786 0.215022045100380 0.219519742921075 0.204967977346111 5 5|0 -|/ 9488788 9490025 9489330.3 9488151 9490819 - gene protein_coding_gene TRUE TRUE AT5G26980.1|AT5G26980.2 SYP41 (SYNTAXIN OF PLANTS 41); t-SNARE member of SYP4 Gene Family Identical to Syntaxin-41 (AtSYP41) (AtTLG2a) (SYP41) [Arabidopsis Thaliana] (GB:O65359;GB:O04639); similar to SYP43 (syntaxin 43), t-SNARE [Arabidopsis thaliana] (TAIR:AT3G05710.2); similar to putative syntaxin of plants 41 [Oryza sativa (japonica cultivar-group)] (GB:BAD67916.1); contains InterPro domain Target SNARE coiled-coil region; (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain t-snare; (InterPro:IPR010989); contains InterPro domain Syntaxin/epimorphin family; (InterPro:IPR006012) -0.0145645847789205 -0.125655693436713 0.902360142429364 1 0.0530801709073878 7.4940223547834 -0.0145645847789205 0.137427627406469 AT5G38310_at 1.27318357390914 1.10192860396562 1.39528563821422 1.54521793679969 1.64006923730266 1.16023532526123 1.31947758079205 1.45083962441071 1.20393015684536 1.36025088049215 1.66576327428292 1.37174059012007 1.29316750003260 1.38605511659565 1.47714909023263 1.47214017746050 0.909211903656667 1.55628380529543 1.43530440227307 0.194268055397197 0.187576812123905 0.200248568344084 0.188084591639116 0.189470956035304 0.193395533857160 0.187576812123905 0.188517850714878 0.201836206975463 0.196741959591207 0.192552756654909 0.195746396110851 0.197195843249125 0.187576812123905 0.193447072659663 0.195599717888618 0.197628527275203 0.191009449402701 0.203638468859538 5 5 - 15327920 15328440 15328218.545 15327635 15328551 - gene protein_coding_gene TRUE TRUE AT5G38310.1 unknown protein 0.0121205154328821 0.123169410666976 0.904281322937634 1 0.0527659009164685 2.72308006278846 0.0121205154328821 0.09467601110427 AT5G59810_at 0.783216046868175 0.521420578383602 0.425021051527926 1.06321667927415 0.7842978538133 0.450155471785632 0.70363835424285 0.810738143131999 1.10335974629146 0.470986839921911 0.654399310820892 0.510927583583845 0.892213153607136 0.598438461598289 1.19981689124089 0.820559852386399 0.818201026604233 1.61909838747559 0.611254667607783 0.198933092326018 0.195331882338056 0.192978606672214 0.197372574553342 0.197766127109998 0.199231341669059 0.200087596439151 0.198123282595702 0.198831885088455 0.205254846656004 0.192609998419640 0.202492999487781 0.193549973735114 0.193775336647369 0.197495489488355 0.198581151324266 0.196162330474525 0.224884542078012 0.200000536369758 5 5 - 24114136 24114696 24114371.364 24114041 24117783 - gene protein_coding_gene TRUE TRUE AT5G59810.1 subtilase family protein similar to AIR3 (Auxin-Induced in Root cultures 3), subtilase [Arabidopsis thaliana] (TAIR:AT2G04160.1); similar to subtilisin-like protease [Triticum aestivum] (GB:CAJ75644.1); similar to subtilisin-like protease [Glycine max] (GB:AAQ23176.1); similar to putative subtilisin-like proteinase [Oryza sativa (japonica cultivar-group)] (GB:BAD35630.1); contains InterPro domain Protease-associated PA; (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Proteinase inhibitor, propeptide; (InterPro:IPR009020) 0.0137992909700071 0.120675261551486 0.906209228026665 1 0.0524569277273891 1.50158331472264 0.0137992909700071 0.133930449365945 AT5G49140_at 1.19269199160401 0.921731763193991 0.824424039918323 0.887454821864291 0.690548540307987 0.9336640191547 0.275868467099795 0.41951663783678 0.758918993407643 0.921645052177434 0.452848105745887 0.598205027029887 0.445851660852624 0.400467135474103 0.721056895219323 0.551357563635948 1.13083209361329 1.18054217890155 0.382899649246231 0.190784526254938 0.190784526254938 0.196505947327633 0.197347241177979 0.195668816752244 0.195724303067550 0.191067533038522 0.193257292892666 0.202313795463314 0.193018452946647 0.196771452041099 0.191872639490820 0.192603703265845 0.190956999701706 0.190784526254938 0.196117823326314 0.198963704713497 0.198681234668607 0.193606367450632 5 5 - 19936344 19936873 19936591.909 19936311 19940641 - gene protein_coding_gene TRUE TRUE AT5G49140.1 disease resistance protein (TIR-NBS-LRR class), putative similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G11170.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41750.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G41550.1); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713) 0.0107620701519326 0.119771075172061 0.906908295271354 1 0.0523464742620863 1.45472069220724 0.0107620701519326 0.0685987154700921 AT5G66510_at 9.22278848714347 9.09810209359387 9.75019789390109 9.7777107467294 9.51796983071163 9.49089499295615 9.33426608192213 9.18958669955 8.26494849738363 8.59863738785549 9.51992160384674 9.7094635131785 9.48359205475083 9.44484659130797 9.7082488366731 9.34505257385227 9.35580020567845 9.50735478516754 8.49782718019111 0.115466513289690 0.111606380880754 0.111406036722971 0.108617986655783 0.112280327127547 0.112493570711723 0.113667577335264 0.114948997965079 0.146615881858060 0.113958306205591 0.118418007764958 0.110813033526916 0.115760110301104 0.114940413662468 0.113539004700440 0.109807464554025 0.116008182174211 0.116525619285303 0.110515024224142 5 5 - 26567269 26568087 26567607.909 26566930 26568856 - gene protein_coding_gene TRUE TRUE AT5G66510.1|AT5G66510.2 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase|GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. similar to GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1), carbonate dehydratase [Arabidopsis thaliana] (TAIR:AT1G19580.1); similar to hypothetical protein [Thellun (GB:ABB45859.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) -0.00976109762762944 -0.119030102301232 0.907481236518525 1 0.0522565761352427 18.4042342911636 -0.00976109762762944 0.033720723405242 AT5G10290_at 6.92720087956343 7.22832774858145 7.60818568819721 7.33270201376934 7.2192681350131 6.21081736426779 4.8254868564278 4.94105085363122 5.89366257762122 5.2288045663412 6.18999088379032 7.21706788250282 5.66011890268755 6.81591094085534 6.95114128007462 7.23620604153262 5.25020016422019 5.6345013516728 5.17002598848598 0.198472691712602 0.187358833920573 0.190174134139516 0.192592819307751 0.186260264728551 0.201044861434070 0.195341421627983 0.193217590279637 0.206574474033492 0.196094444966777 0.191469734855920 0.188193265608574 0.189158561191692 0.184029146133199 0.189089745643347 0.188989944432096 0.197455941499421 0.209559108562046 0.209090294318206 5 5|0 -|/ 3235533 3236034 3235745.9 3235296 3238720 - gene protein_coding_gene TRUE TRUE AT5G10290.1 leucine-rich repeat family protein / protein kinase family protein similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G65240.1); similar to 4D11_24 [Brassica rapa subsp. pekinensis] (GB:AAZ67538.1); similar to putative receptor-like kinase (with alternative splicing) [Oryza sativa (japonica cultivar-group)] (GB:AAS07247.1); similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98429.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) -0.0166479263839835 -0.118175295025706 0.908142266353316 1 0.0521535581675895 12.4367415549647 -0.0166479263839835 0.189326598371498 AT5G14170_at 8.145339684378 8.37094175342974 8.79094160929825 9.00489880177015 9.58437802933052 9.3783909920476 8.01999436527089 7.81588490669158 8.22154634569116 8.00569694323364 8.89430384459463 8.79915509242231 8.95190710258943 8.75290747950922 8.56377813174349 8.85396165816593 8.67283900284957 8.86778331663893 8.4023131194328 0.154764091773499 0.152673597396817 0.156724439196272 0.157918834548409 0.159033784610467 0.158186683289502 0.160663509255382 0.165934424279875 0.156117484216811 0.157278790558707 0.148191950842000 0.15446310368173 0.153592733063640 0.154225079605627 0.153815867811356 0.153340834948642 0.157508297490435 0.156712945872480 0.147688212022246 5 5 - 4568725 4569373 4569102.818 4568511 4570949 - gene protein_coding_gene TRUE TRUE AT5G14170.1 SWIB complex BAF60b domain-containing protein Identical to Protein At5g14170 [Arabidopsis Thaliana] (GB:Q9FMT4); similar to SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G01890.1); similar to OSJNBa0072D21.8 [Oryza sativa (japonica cultivar-group)] (GB:CAD40740.2); similar to OSIGBa0092E09.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66378.1); similar to SWIB/MDM2 [Medicago truncatula] (GB:ABE78941.1); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) 0.0107814984778301 0.118047258177273 0.908241284650071 1 0.0521381914309607 17.1410620626188 0.0107814984778301 0.0735767916657664 AT5G14430_at 8.46001411174998 8.44621054014436 8.85768078990954 8.9991287855928 9.23483878711958 9.1073253259345 8.13356232595729 8.25327951769816 8.207983667672 8.0821947566351 9.15802895467744 9.33552819712275 9.18016609109052 8.92149128735182 9.1755909710925 9.54019767960586 8.82016947182248 9.10313731316556 8.39469835528175 0.134817097698178 0.129693790550351 0.134238667062029 0.132918398410090 0.143346479127817 0.142344401383981 0.127118675040150 0.125890088027770 0.151440881432532 0.135775904226353 0.130222593469853 0.13791928027707 0.126938831437571 0.132316068012054 0.137631920111250 0.132076981916154 0.135765522778035 0.138647600916151 0.134534811640852 5 5 + 4654986 4655662 4655355.545 4652983 4655976 + gene protein_coding_gene TRUE TRUE AT5G14430.1|AT5G14430.2 dehydration-responsive protein-related similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G04430.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G23300.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT4G14360.2); similar to dehydration-responsive protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47791.2); similar to dehydration-responsive protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD46056.1); similar to Protein of unknown function DUF248, methyltransferase putative [Medicago truncatula] (GB:ABE90857.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative; (InterPro:IPR004159); contains InterPro domain Generic methyltransferase; (InterPro:IPR001601) 0.00974451622423045 0.117565857450364 0.908613594286248 1 0.0520805632821787 17.3777955258153 0.00974451622423045 0.039000686853476 AT5G48760_at 7.14735320220403 6.71955194568763 7.35415648270422 7.09543348544031 7.3582579979809 7.27300497315356 6.69892097024545 7.25924548201138 5.80650223389527 6.10004166566428 7.9709118907679 8.41912204133025 8.18056635182594 7.63305421235306 8.60095748534102 7.80486004838809 7.64088050908275 6.52887770638407 6.316000156161 0.202495815283491 0.202124949578406 0.204607873305458 0.206936291537072 0.213809167511251 0.214196588169994 0.213744506097979 0.206760028251481 0.233313043008833 0.220904832842316 0.202124949578406 0.204013161082422 0.212660116846524 0.213203216966399 0.215172082028764 0.202124949578406 0.210103418865187 0.210178148787252 0.219143552532758 5 5 - 19788555 19789820 19789370.455 19788364 19789964 - gene protein_coding_gene TRUE TRUE AT5G48760.1|AT5G48760.2 60S ribosomal protein L13A (RPL13aD) Identical to 60S ribosomal protein L13a-4 (RPL13AD) [Arabidopsis Thaliana] (GB:Q9FKC0;GB:Q42084); similar to 60S ribosomal protein L13A (RPL13aA) [Arabidopsis thaliana] (TAIR:AT3G07110.1); similar to 60S ribosomal protein L13A (RPL13aC) [Arabidopsis thaliana] (TAIR:AT4G13170.1); similar to 60S ribosomal protein L13a-like protein [Solanum tuberosum] (GB:ABA46790.1); contains InterPro domain Ribosomal protein L13; (InterPro:IPR005822); contains InterPro domain Ribosomal protein L13, archea and eukaryotic form; (InterPro:IPR005755) 0.0130974789537794 0.11594014118029 0.909871073739738 1 0.0518876855569848 14.0740331337239 0.0130974789537794 0.130788933444737 AT5G65580_at 1.47417384948391 1.50101000748329 1.70030683787914 1.96564588909324 2.30939786808154 1.75272877546169 1.63145810354145 1.51906412631284 1.74208949498076 2.03428509089964 1.94459688747058 1.87206323902628 1.86459539864653 1.86579891523723 1.94679646594152 1.81657775780745 1.37426056612562 2.05125030924891 2.16474447232718 0.212690614906869 0.211359198227549 0.218925944818111 0.212327342025086 0.226108019149751 0.211359198227549 0.222370529118899 0.216883229340092 0.215083835848946 0.222224622445107 0.213560578027983 0.214547675526097 0.216263368088224 0.211359198227549 0.216700826000046 0.214791444261868 0.215665280613861 0.216617648492483 0.215065963665592 5 5 + 26224893 26225096 26224980.364 26224880 26225188 + gene protein_coding_gene TRUE TRUE AT5G65580.1 unknown protein -0.0117752275629279 -0.11356197798802 0.91171103106537 1 0.0516103612495054 3.64290591308741 -0.0117752275629279 0.108575477504833 AT5G08250_at 1.73986510420913 1.69241948545772 2.25496163868512 2.25318706241656 1.45808997696535 1.93385960595232 1.44148082019330 2.03672112387303 1.53576612361308 2.08473660369186 2.14707691368892 1.73272592207736 2.29550677057712 1.95160545150626 1.70966340092932 1.91361817825857 1.97451810146545 2.14156947201392 2.07550609726530 0.190810665697099 0.178624549224628 0.178155560400080 0.181032480154902 0.177730449873483 0.179974202318424 0.180104528391549 0.180719757275514 0.1776711831474 0.185085335891623 0.188593318310132 0.181478964492947 0.180519507092278 0.188087562794295 0.179717829744676 0.182611468565724 0.176850493282718 0.179527426393379 0.178954017986155 5 5 - 2653767 2654621 2654074.182 2653580 2655733 - gene protein_coding_gene TRUE TRUE AT5G08250.1 cytochrome P450 family protein similar to CYP86B1 (cytochrome P450, family 86, subfamily B, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G23190.1); similar to Os10g0486100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064901.1); similar to E-class P450, group I [Medicago truncatula] (GB:ABE89065.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.0128704275083574 0.113341610534130 0.911881554488381 1 0.0515849537764419 3.79230066947142 0.0128704275083574 0.132126073600021 AT5G15050_at 7.80132890583607 8.01581852864875 8.50831092774248 8.41575861244125 8.70364746288433 8.82579330716919 8.53610100102686 8.24275858894156 8.07162006900427 7.72691649315901 9.3218967374039 9.1631046600528 8.9785833785779 9.10005615359627 9.40500819649397 9.01107719641096 8.71820638219835 9.06825802436378 7.84275213147706 0.141178706981176 0.133884736316414 0.132552755108024 0.142476063997770 0.141925882410209 0.143341219884200 0.141116592635770 0.145490787385747 0.15668594637486 0.145130715492706 0.148234008665699 0.134779286132629 0.133361664095482 0.140419508776919 0.144231554959678 0.136214349530416 0.136811640591266 0.137761905357972 0.142467008990266 5 5|0 -|/ 4871825 4872502 4872058.5 4871642 4873601 - gene protein_coding_gene TRUE TRUE AT5G15050.1 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G39990.1); similar to BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Ae (GB:CAH05144.1); similar to Os12g0639700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067391.1); contains InterPro domain Transglutaminase, C-terminal; (InterPro:IPR008958); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) -0.0101407188590870 -0.112982167447213 0.912159706571608 1 0.0515436170713095 16.8692913696783 -0.0101407188590870 0.0682505100467296 AT5G53280_at 5.67864649999974 5.49086076979368 7.05814324962988 7.09246478286249 6.71132250351874 6.23691844965036 7.61588376965519 7.56282002814468 5.32467310801601 5.44084955217316 7.39869367855484 7.25446606824145 7.5401915245722 7.41308816164185 7.36961385134956 7.3298438992586 7.33173346189144 6.98603969505128 5.43862579438633 0.192417123565942 0.198669909129398 0.201019307433543 0.194938722309207 0.193570429764143 0.200200843529064 0.191759929561090 0.197590303414655 0.231300192643806 0.206519301627425 0.196034615660288 0.192639584816398 0.192667917776486 0.204463225114809 0.205628763133550 0.195299737449378 0.190567745618868 0.211486111417550 0.190567745618868 5 5|0 +|/ 21625057 21626150 21625798.9 21624733 21626644 + gene protein_coding_gene TRUE TRUE AT5G53280.1 PDV1 (PLASTID DIVISION1) An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site. similar to PDV2 (PLASTID DIVISION2) [Arabidopsis thaliana] (TAIR:AT2G16070.2); similar to Os06g0506000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057719.1); similar to Os01g0224200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042451.1); similar to Os02g0264300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046494.1) 0.0108689591554816 0.112781847394498 0.912314727961838 1 0.0515206366778565 13.0455533120378 0.0108689591554816 0.0889703657018209 AT5G52980_at 4.15773715427462 5.0504827285494 4.62526909490038 5.52677357439696 4.86017498459524 4.41788468884528 4.03389863868894 4.0235016857101 3.77318886276298 2.69791240789073 4.28813761240720 4.49355069525161 4.28419535373035 4.25315013211703 4.02466839681322 3.95974243716062 3.78406390863913 4.02709921068378 3.05954711262566 0.245701415956273 0.241380672790172 0.256587831499772 0.255412732742923 0.24461397043807 0.258906804743485 0.256766291915088 0.250599746504073 0.247918792626239 0.243441072009049 0.241605671262686 0.250081863695082 0.241590434157680 0.24350604894453 0.255147075588401 0.241380672790172 0.258859188040958 0.243277330971554 0.242043634426314 5 5 - 21499563 21500752 21500176.818 21499386 21500948 - gene protein_coding_gene TRUE TRUE AT5G52980.1 similar to Os02g0225300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046340.1) -0.0183887914225986 -0.112463249363657 0.912561288844859 1 0.0514841714178634 8.24506970013353 -0.0183887914225986 0.232527376170431 AT5G62090_at 5.66982681059474 6.1158758123373 6.99558890953858 6.98663902084172 7.53913577104676 7.11628096021327 6.21058830677562 6.28597761537496 5.92771326252728 5.80358365118049 7.11952939327174 7.02121450331676 7.0551822614378 7.01203706861136 6.2535816168716 6.6016658073636 6.53224644220657 7.23014366590039 5.74797279330982 0.216939265449433 0.207937837123492 0.225056850676857 0.217682806092760 0.207937837123492 0.213200374575036 0.211113417896078 0.226089465740336 0.230516947888592 0.21928975631312 0.211640410432138 0.208496433359961 0.217625309427773 0.215229491607657 0.218032685764035 0.209445094271973 0.216852464693887 0.213481957046121 0.209685552109872 5 5 - 24952514 24953010 24952821.091 24952189 24956335 - gene protein_coding_gene TRUE TRUE AT5G62090.1|AT5G62090.2 similar to transcriptional co-regulator family protein [Arabidopsis thaliana] (TAIR:AT4G25520.1); similar to SEU1 protein [Antirrhinum majus] (GB:CAF18247.1) 0.0114749962770184 0.111260225640404 0.913492387712057 1 0.0513474066889192 12.9548008161129 0.0114749962770184 0.107172342716363 AT5G23430_at 4.02164423307539 4.66698301150203 4.50986016151659 4.64585229966418 5.72655266116325 5.44600640243608 4.35205135585139 4.00403151312004 4.71163543760325 4.52526083250963 6.067997387120 6.16846686261915 5.76749208070027 6.18327209745955 5.54346542751972 5.69895487963697 5.16552408113336 6.43245447683049 5.3557153747658 0.224451010925219 0.216936369741405 0.220949467304517 0.220171067405989 0.226002155180486 0.220531420937901 0.23003576943904 0.222585246340334 0.215984245422344 0.228214966619385 0.222062548605500 0.218742705988984 0.216001839002589 0.225561574155926 0.218799007924557 0.22446359206987 0.232436306085990 0.218515318791901 0.223222537335824 5 0|5 /|- 7893994 7894730 7894280.143 7893674 7900390 - gene protein_coding_gene TRUE TRUE AT5G23430.1|AT5G23430.2 transducin family protein / WD-40 repeat family protein Identical to Katanin p80 WD40-containing subunit B1 homolog 1 [Arabidopsis Thaliana] (GB:Q8H0T9;GB:Q9FHL5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08390.1); similar to H0801D08.1 [Oryza sativa (indica cultivar-group)] (GB:CAJ86243.1); similar to H0402C08.11 [Oryza sativa (indica cultivar-group)] (GB:CAJ86235.1); similar to OSJNBa0064G10.18 [Oryza sativa (japonica cultivar-group)] (GB:CAE05767.2); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.0128000011749729 -0.110239643484303 0.914282389983525 1 0.0512325329726439 10.0429513514180 -0.0128000011749729 0.137877985860278 AT5G36880_at 8.5895275873008 8.69149071060363 9.23007460998572 9.1280537691574 9.37315619748696 8.96507053928135 8.47022199706327 8.41276556960482 7.95799762370125 8.07180052303842 8.97049327079307 9.13958514355182 8.71606414190317 9.0261821200412 9.01867337558223 8.78137801989987 8.7010863402486 9.06963359896634 7.77885066441434 0.129552744356883 0.130370628190361 0.128601728062449 0.130538402479340 0.134111552412677 0.131843344362581 0.126181426178109 0.135326627503771 0.144512382900310 0.137776615312957 0.125786432945109 0.123602494226402 0.125161761064318 0.123773442188216 0.128771799077252 0.124042696289117 0.132156567104154 0.136339193252654 0.130058886674144 5 5|0 -|/ 14552196 14553362 14552675.7 14551843 14557529 - gene protein_coding_gene TRUE TRUE AT5G36880.1|AT5G36880.2 acetyl-CoA synthetase, putative / acetate-CoA ligase, putative|AMP binding / acetate-CoA ligase/ catalytic similar to acyl-activating enzyme 17 (AAE17) [Arabidopsis thaliana] (TAIR:AT5G23050.1); similar to Acyl-CoA synthetase (ISS) [Ostreococcus tauri] (GB:CAL52318.1); similar to acetyl-CoA synthetase [Solanum tuberosum] (GB:CAA67130.1); similar to H0502B11.5 [Oryza sativa (indica cultivar-group)] (GB:CAH66525.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873); contains InterPro domain Acetate--CoA ligase; (InterPro:IPR011904) -0.0100827681956013 -0.109664390737357 0.914727718894024 1 0.0511682495695301 17.2895967584395 -0.0100827681956013 0.0755596924211906 AT5G08540_at 6.9717706197562 7.28605982023767 7.89392377929714 7.82244984345958 8.31697748346178 8.05474679920846 6.84983459513926 6.79859949454901 6.35548650258839 6.78799175626124 8.06449939882411 7.58440723575628 7.28690375825482 7.0322416173745 7.9098356911382 7.9806007992533 7.26392235753637 7.43113438032953 6.59163095569911 0.183558569582483 0.180180232867051 0.183309085682667 0.184542687021864 0.185062277183731 0.192899310325935 0.182739080315732 0.183138199111716 0.182954979521716 0.181908687135418 0.179125845557778 0.181389501711437 0.184980517940679 0.183672344689262 0.179769016343468 0.183298955445455 0.189475958131224 0.195666479436901 0.179165828245873 5 5|0 +|/ 2764459 2765406 2764939.9 2763824 2765735 + gene protein_coding_gene TRUE TRUE AT5G08540.1 similar to Os04g0527800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053370.1); similar to RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains (ISS) [Ostreococcus tauri] (GB:CAL57083.1) 0.0099679974907061 0.109549026066425 0.91481703155428 1 0.0511553981750276 14.5730767508843 0.0099679974907061 0.0724510648772283 AT5G14260_at 10.6347496287681 10.5685165686883 11.0867160530583 10.9537472587794 11.5933980727721 11.0913830959029 10.9668142418225 10.8350794703819 10.9076206299292 10.4303228783834 11.5676194024753 11.5461245450947 11.4102266362840 11.3916825190508 11.5083516786093 11.5681373090703 11.1227361618375 11.3826188079396 10.7284926815606 0.0915071146223298 0.0869265562728328 0.0906748474198663 0.0906953356887799 0.0920160681215429 0.0905123254660632 0.0879673352591045 0.0884096742259079 0.0876243043567327 0.0952389863622395 0.0869265562728328 0.0869265562728328 0.0869265562728328 0.0914037331453679 0.0911169936579933 0.0869265562728328 0.101642791141671 0.0906454571557426 0.0869265562728328 5 5|0 +|/ 4602774 4604025 4603508.333 4600999 4604485 + gene protein_coding_gene TRUE TRUE AT5G14260.1|AT5G14260.2|AT5G14260.3 SET domain-containing protein similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07670.1); similar to Os12g0236900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066466.1); similar to Nuclear protein SET [Medicago truncatula] (GB:ABE81113.1); contains InterPro domain Nuclear protein SET; (InterPro:IPR001214) 0.0105585818923082 0.107793623758869 0.916176174922185 1 0.0509615146793165 22.0293001466898 0.0105585818923082 0.0934239742625396 AT5G55350_at 1.62377099256753 1.39902180845806 1.43231192033204 1.52391630912009 1.41506978808284 1.50898648827776 1.36040632423605 1.17100432644276 1.18298247156578 1.36828984786496 1.31891351597803 1.44884544256526 1.47276378168087 1.32091946435425 1.93906810478381 1.44467158128681 1.38783124001043 1.38792573442240 1.56085154204589 0.232018239811203 0.229344893653206 0.234406803029323 0.227621206704177 0.230922717185739 0.234774946134548 0.228272021794925 0.22768254781834 0.233367113134514 0.231013379605680 0.227621206704177 0.227621206704177 0.233378563861985 0.227621206704177 0.233910648761999 0.229559304044157 0.232244693174897 0.230218776451385 0.238970616769955 5 5 - 22459678 22460130 22459899.182 22459582 22460619 - gene protein_coding_gene TRUE TRUE AT5G55350.1 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related similar to long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein [Arabidopsis thaliana] (TAIR:AT5G55360.1); similar to wax synthase isoform 1 [Vitis vinifera] (GB:AAO18664.1); contains InterPro domain Membrane bound O-acyl transferase, MBOAT; (InterPro:IPR004299) -0.00928455116000115 -0.107439074175363 0.91645072388901 1 0.0509227340820068 2.84722365067003 -0.00928455116000115 0.0557002245606963 AT5G12330_at 2.25216549559743 2.052945683948 2.08920557975305 2.22782759462066 1.70520270637129 2.41123662013236 1.82433477303859 2.11838663224488 2.47555670112009 1.77295455166963 2.72473623665256 2.23347559382031 2.10198639307244 2.38281858247759 2.30929377331229 2.21198035487269 2.05436937356159 2.74632392341766 1.8399360359467 0.179083436762758 0.181210099296476 0.177590593947679 0.176445390226768 0.178241506123759 0.183302876104741 0.184728560359014 0.17821050076993 0.181609987497914 0.179308543819991 0.192406556751287 0.183868295428399 0.181936092509387 0.183109893594949 0.181955634083470 0.176445390226768 0.186467794945159 0.185224549372877 0.179251088497422 5 5 - 3987749 3988648 3988240.182 3987376 3989755 - gene protein_coding_gene TRUE TRUE AT5G12330.1|AT5G12330.2|AT5G12330.3 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. similar to STY2 (STYLISH 2) [Arabidopsis thaliana] (TAIR:AT4G36260.1); similar to LRP1 (GB:AAA87790.1); contains InterPro domain Zinc finger, LRP1-type; (InterPro:IPR006510); contains InterPro domain LRP1, C-terminal; (InterPro:IPR006511); contains InterPro domain Protein of unknown function DUF702; (InterPro:IPR007818)|similar to STY1 (STYLISH 1) [Arabidopsis thaliana] (TAIR:AT3G51060.1); similar to LRP1 (GB:AAA87790.1); contains InterPro domain Zinc finger, LRP1-type; (InterPro:IPR006510); contains InterPro domain Protein of unknown function DUF702; (InterPro:IPR007818) -0.0124861251029884 -0.107128960023383 0.916690873217073 1 0.0508889183333144 4.27271586495188 -0.0124861251029884 0.138860056444495 AT5G64870_at 2.31143669603119 2.16796751593471 2.90423456402865 3.14150842562475 1.99660280072286 2.15469759001012 1.92712412931607 2.08191542547997 1.94484615792768 1.86272998387125 1.61836135602364 1.81653343764247 2.41539154418549 2.08905713690869 2.09394208524145 1.75690236929645 2.25182747665094 1.87100856361840 2.18726505971986 0.222100212086842 0.214673721906626 0.222071558193953 0.223711851950297 0.219762761810176 0.226560660805956 0.217700117594578 0.218380935705432 0.227192531818762 0.220401614422334 0.220662957627208 0.220997561715234 0.22054600460389 0.216090882893591 0.215890709858997 0.214673721906626 0.218321798939265 0.214673721906626 0.222361502546366 5 5 - 25947008 25947391 25947186.727 25946764 25948610 - gene protein_coding_gene TRUE TRUE AT5G64870.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25250.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25260.1); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE86648.1); similar to 80C09_16 [Brassica rapa subsp. pekinensis] (GB:AAZ41827.1); similar to nodulin [Glycine max] (GB:AAC72337.1); contains domain FLOTILLIN-RELATED (PTHR13806); contains domain BAND 7-RELATED (PTHR13806:SF3) 0.00940547290124405 0.107048695436870 0.916753030740002 1 0.0508801819361439 4.32939009174464 0.00940547290124405 0.0613884677650784 AT5G07420_at 1.06853806877396 0.693416929578015 1.15469506977830 1.43652480155961 0.977624661268476 1.15723066464370 0.994169992853086 0.627619125072536 1.33320432769711 0.930285241727213 0.63093902437668 1.0181533718149 1.04017459783903 1.2172342574236 1.21372303631682 0.842483826164506 0.747816404331661 1.22103945012195 1.36818245384296 0.189217422001026 0.189657205401414 0.192800337859042 0.196624344168807 0.189516216081060 0.197253613113850 0.190769955872136 0.197780938075925 0.198529021819250 0.190959194920495 0.194033681079974 0.189122687622461 0.189911299957557 0.192718460573775 0.190328457706694 0.191482216163167 0.195478757445712 0.194230331814911 0.190813911930549 5 5|0 +|/ 2350431 2351328 2350942.2 2349456 2351510 + gene protein_coding_gene TRUE TRUE AT5G07420.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G07430.1); similar to pectin methylesterase allergenic protein [Salsola kali] (GB:AAX11262.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) -0.0110281504273745 -0.106744211080685 0.91698883110983 1 0.0508470997410721 2.11472883275983 -0.0110281504273745 0.107622989261207 AT5G50760_at 1.13441873655984 1.12438451448908 2.13405143667459 2.49910093887374 1.19239750490018 1.19010739912033 1.40909713208760 1.14435834665514 1.13043783625271 1.61663130022605 0.721113588677816 0.832390051729989 1.21083901774177 1.07393015957352 1.43902305955191 0.731505229278285 0.928238120987836 1.68445764638658 1.52929395237832 0.214209354557652 0.208300901041968 0.209482053615886 0.214218043931237 0.208300901041968 0.213035776131511 0.208300901041968 0.208300901041968 0.210659553995690 0.211543217939405 0.215310600510977 0.209759813266102 0.22040570671234 0.213271061060972 0.211055891510795 0.211381807020215 0.211907141890512 0.214268411923315 0.214385310060951 5 5 + 20662048 20662519 20662330.636 20661887 20662695 + gene protein_coding_gene TRUE TRUE AT5G50760.1 auxin-responsive family protein similar to auxin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT3G43120.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD88039.1); contains InterPro domain Auxin responsive SAUR protein; (InterPro:IPR003676) 0.00978891675733046 0.105566353346279 0.917901072556673 1 0.0507200109053678 2.73006023726672 0.00978891675733046 0.0780577623712351 AT5G64350_at 11.6041458790294 11.6534250767536 12.2735836543516 12.2666342705288 12.0523753618681 12.0747184524673 11.5658491717794 11.7675733304711 11.1494202777668 11.7199663179563 12.0467161040606 12.0699173070771 11.9696595062907 11.6214430617533 12.0773644394996 12.0473836537894 12.0341571708283 12.0472168067973 11.5116181101604 0.0744365487306364 0.0710464057618898 0.0723396749958924 0.0721137757606465 0.0711838159164556 0.0727274618689105 0.0700789308616718 0.0721768353267555 0.0748701048256695 0.0705889224146717 0.0710892681060569 0.0706271080316288 0.0720083750285226 0.082674764081407 0.0705150712575897 0.0720191526399305 0.0758657194031923 0.0723096344146037 0.0714015540571023 5 5|0 -|/ 25752060 25753183 25752365.444 25751824 25753297 - gene protein_coding_gene TRUE TRUE AT5G64350.1 FKBP12 (FK506-binding protein 12 kD); FK506 binding / peptidyl-prolyl cis-trans isomerase Identical to Peptidyl-prolyl isomerase FKBP12 (EC 5.2.1.8) (12 kDa FK506-binding protein) (12 kDa FKBP) (FKBP-12) (Immunophilin FKBP12) (AtFKBP12) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (FKBP12) [Arabidopsis Thaliana] (GB:Q8LGG0;GB:O04263); similar to immunophilin-related / FKBP-type peptidyl-prolyl cis-trans isomerase-related [Arabidopsis thaliana] (TAIR:AT4G25340.1); similar to ROF1 (ROTAMASE FKBP 1), FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25230.1); similar to CONSTANS interacting protein 3 [Lycopersicon esculentum] (GB:AAS67371.1); contains InterPro domain Peptidylprolyl isomerase, FKBP-type; (InterPro:IPR001179) 0.008594553955648 0.104305626937643 0.91887763252134 1 0.050585539618164 23.6320717287678 0.008594553955648 0.0361632837207123 AT5G30520_at 1.76563112274581 1.96713684830365 1.71193993969437 2.01821337738490 1.65398985062781 2.28122036201837 1.90186661247559 1.74798712629114 1.69093472008238 1.90178678609005 1.78416653795887 1.71240461118227 1.85443652768620 2.08924368343351 2.21554350658883 1.94110884597406 1.96116918266910 2.29488199329738 1.59909506848138 0.208617357565515 0.205687642320818 0.209561460221178 0.213362580734606 0.208652421630225 0.223120010902708 0.215082735101651 0.204794610014275 0.206014229524854 0.211197493322129 0.211651199834429 0.206750954467327 0.214815459922551 0.212636846852113 0.213173671508468 0.205709633426299 0.215858563704056 0.205988528240204 0.205053180999966 5 5 - 11653434 11653835 11653616.727 11653422 11653868 - gene protein_coding_gene TRUE TRUE AT5G30520.1 unknown protein 0.0115481292778754 0.103129303051210 0.919788940874176 1 0.0504615246182585 3.73711059793439 0.0115481292778754 0.128516245605723 AT5G64270_at 9.73975506561079 9.93814889060347 10.5822997826179 10.4882739362951 10.5749648593986 10.501151432808 9.5611678849415 9.73830903745889 9.338021844914 9.48344242088505 10.1318379155107 10.0066666270430 10.0934878239390 9.8135764905193 9.9647567594334 10.2464407551240 10.0054965318382 9.96077616005991 9.66844767489897 0.0918401452915661 0.0892923159614512 0.0941920645896028 0.103008555493244 0.0903284415878251 0.100720891768822 0.090013051780132 0.0924761842302796 0.104863815999318 0.0955721435471937 0.0922246140455435 0.0892923159614512 0.0896743397205774 0.0937003345763297 0.0947010856896505 0.0912795209382596 0.107454456900593 0.101943361280385 0.096017958668987 5 5 + 25727349 25727778 25727534.727 25723885 25728151 + gene protein_coding_gene TRUE TRUE AT5G64270.1 splicing factor, putative similar to PDF2 (PROTEIN PHOSPHATASE 2A SUBUNIT A3), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT1G13320.1); similar to RCN1 (ROOTS CURL IN NPA), protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT1G25490.1); similar to U2 small nuclear ribonucleoprotein, putative [Aedes aegypti] (GB:EAT45112.1); similar to PREDICTED: splicing factor 3b, subunit 1 [Pan troglodytes] (GB:XP_516006.2); similar to PREDICTED: similar to CG2807-PA isoform 1 [Apis mellifera] (GB:XP_623732.1); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain HEAT; (InterPro:IPR000357) -0.00864017699285435 -0.101420211339963 0.921113204147118 1 0.0502838430988203 19.9027674594665 -0.00864017699285435 0.0504620929167258 AT5G09480_at 1.70764465080268 1.32119584760459 1.75970060172395 1.30106742425566 1.66796016306842 1.76835076526142 1.38896573916514 1.30938390124758 1.58937401676477 1.39972957509487 1.65186905648798 1.16509979399998 1.27786867581341 1.22188784571674 1.75278024571632 1.39371775006918 1.77577783622814 1.47775390913972 1.29813897399082 0.168723281991188 0.166999371842699 0.173693412254878 0.168822383018038 0.179996482120771 0.169936665192288 0.169304152032783 0.171276980528377 0.167619081968400 0.169313894580675 0.177176230095590 0.166023855389955 0.170443058141867 0.169997578935382 0.170834719132615 0.167558629843269 0.171354758972428 0.171217846576153 0.173168673953880 5 5 - 2951256 2951552 2951389.182 2950915 2951694 - gene protein_coding_gene TRUE TRUE AT5G09480.1 hydroxyproline-rich glycoprotein family protein similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G09520.1); similar to Pro- and Glu-rich, PENPEV (10x); similar to Streptococcus B antigen, corresponds to Swiss-Prot Accession Number P27951 [Paramecium bursaria Chlorella virus 1] (GB:NP_048785.1) 0.0104131781340498 0.101366613292536 0.921154737846258 1 0.0502783188268388 2.97487125885614 0.0104131781340498 0.106129024577489 AT5G43710_at 3.43098747151265 4.0040312379938 4.52533019113812 4.72380030953561 5.44337911890665 3.41348600061171 4.69738607912437 3.89581632937929 3.48569352393394 3.88887921939746 5.15922129999646 5.58277686267673 5.19121469147 5.24293494272567 4.60282517794312 4.98668647433687 4.09888323443547 4.30920410102559 3.87848306660245 0.272652630515472 0.268601735780712 0.272907148292451 0.272484237744961 0.271730134988030 0.295359905831977 0.273811329149307 0.271666503326402 0.279872404103288 0.275442866570347 0.275437313621817 0.273565084070734 0.268381805242475 0.274155249268576 0.268448422607784 0.267093264073561 0.276976417515349 0.283156992554869 0.267093264073561 5 5|0 -|/ 17569578 17570461 17570096 17569357 17573897 - gene protein_coding_gene TRUE TRUE AT5G43710.1 glycoside hydrolase family 47 protein similar to glycoside hydrolase family 47 protein [Arabidopsis thaliana] (TAIR:AT1G27520.1); similar to putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa (japonica cultivar-group)] (GB:BAD52943.1); similar to Os01g0773600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044401.1); contains InterPro domain Glycoside hydrolase, family 47; (InterPro:IPR001382) 0.0256953788129693 0.101267327144953 0.921231676393735 1 0.0502680932485362 8.59064556796904 0.0256953788129693 0.391988856859858 AT5G41090_at 1.30596896425905 1.23497705197089 1.70670631071567 1.91001362129275 1.23298223784685 1.55459495499567 1.12075103229161 1.75577227602447 1.28650109771813 1.46682109086446 1.43649689222984 1.21498391680531 1.57031870844006 1.29603692961105 1.26248490090307 1.52622640097629 1.85525148064222 0.920497302305939 1.48320962980361 0.184719922225574 0.189191326102019 0.186525278603211 0.189295847293179 0.198985129001261 0.186676733719886 0.194170123766346 0.187835229572104 0.196180669321721 0.187638567804873 0.195298650443242 0.183728604024195 0.188184008324545 0.185507063777461 0.18633467245537 0.190279985271038 0.184584361626028 0.193137298387512 0.195712337608851 5 5|0 +|/ 16463048 16463581 16463331.2 16462992 16463765 + gene protein_coding_gene TRUE TRUE AT5G41090.1 ANAC095 (Arabidopsis NAC domain containing protein 95); transcription factor similar to no apical meristem (NAM) family protein [Arabidopsis thaliana] (TAIR:AT3G56520.1); similar to unknown [Solanum lycopersicum] (GB:CAA99760.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441); contains InterPro domain Calycin-like; (InterPro:IPR011038) 0.0112084512473186 0.100025630473933 0.922193959724991 1 0.0501410542523446 2.87645297581693 0.0112084512473186 0.128697349576877 AT5G59990_at 1.76342674293856 1.51110934537488 1.86651396372517 2.02142811695443 2.24570610883639 1.48397687787368 2.58729132516294 2.40135755923612 1.97456562742628 1.61387983708141 1.98037554093291 1.78546190903377 2.09632981776122 2.1460568564354 1.96752851408563 2.06404299980126 3.09689628434631 3.02404126612083 1.6573070211177 0.178311207840449 0.182365282442491 0.178837173916300 0.186888686512067 0.182267191899912 0.179719645438574 0.191589559016747 0.184714363655101 0.190148341961645 0.186642801781506 0.181718178321592 0.178311207840449 0.186101044584706 0.180966760476702 0.201725938229426 0.184237935716748 0.196290130264530 0.189673545319874 0.191499245409566 5 5|0 -|/ 24168455 24170143 24169731.9 24168432 24170310 - gene protein_coding_gene TRUE TRUE AT5G59990.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41380.1); similar to CCT [Medicago truncatula] (GB:ABD32315.1); contains InterPro domain CCT; (InterPro:IPR010402) 0.0118004004038900 0.0988598348583134 0.92309754065727 1 0.0500232044135939 3.99443916023267 0.0118004004038900 0.145042651610353 AT5G01530_at 13.8607420944359 13.937596114805 14.2192567213028 14.1567417562878 14.0689328730722 14.1991091462757 14.1254751438195 14.1257930779198 14.5694333286291 14.4323091256973 15.1400861529405 15.1233548438437 14.9726765871157 14.8463862462178 15.0675232159851 14.9021030663833 14.8620732296279 15.0704805619325 14.3817341445952 0.057845027678186 0.055741454070555 0.0576806823183525 0.0566818564658456 0.054881064187708 0.0597703257681987 0.0549817132404963 0.0563242207058054 0.0634415483253506 0.0590401744510549 0.0558948452643282 0.0554832603678441 0.0556556257284161 0.0589676968806621 0.0588291735470256 0.054881064187708 0.054881064187708 0.0575029729802576 0.0591471797144955 5 5 + 209410 210173 209816 208936 210444 + gene protein_coding_gene TRUE TRUE AT5G01530.1 chlorophyll A-B binding protein CP29 (LHCB4) Identical to Chlorophyll a-b binding protein CP29.1, chloroplast precursor (LHCII protein 4.1) (LHCB4.1) (LHCB4.1) [Arabidopsis Thaliana] (GB:Q07473;GB:Q8RWN1;GB:Q94AD5;GB:Q94K17); similar to LHCB4.2 (LIGHT HARVESTING COMPLEX PSII) [Arabidopsis thaliana] (TAIR:AT3G08940.2); similar to Chlorophyll A-B binding protein [Medicago truncatula] (GB:ABE80774.1); contains InterPro domain Chlorophyll A-B binding protein; (InterPro:IPR001344) -0.00799467306558288 -0.0984227389555625 0.923436352899625 1 0.0499793739594299 28.8163280431463 -0.00799467306558288 0.028309449871446 AT5G37730_at 1.07373508589771 0.915895471859084 0.849775724959023 0.992652969965263 0.692968635724365 1.16123999328793 0.898057095892064 0.7737767949645 1.03755651462305 0.698324225836216 1.03711137999327 0.97935795130642 0.650023126553208 0.950648683117853 0.900697922303103 0.952855081400424 0.904896685932108 1.10420227004212 0.787253398119124 0.200859601200526 0.194251538563425 0.202533786823515 0.208001301402567 0.201641841479555 0.193630667983152 0.196413964696703 0.196468205257941 0.196497199776822 0.204573944175443 0.199991698383216 0.199644383249984 0.211227567141755 0.194676993120129 0.197662294300459 0.198214595246903 0.202521151388177 0.203927371897992 0.201720070813938 5 5|0 -|/ 15003444 15003952 15003721.6 15003263 15004147 - gene protein_coding_gene TRUE TRUE AT5G37730.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23150.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD32641.1) -0.00955981798541625 -0.0982596715268415 0.923562757715758 1 0.0499630717731334 1.80777214678901 -0.00955981798541625 0.0915802449635946 AT5G47050_at 5.8919868479697 6.0352481046055 8.23793401101642 8.32236046802355 8.1225902539398 8.20372245120001 7.46417760137013 7.76754654508008 6.45668385765343 7.23305211926394 7.60822549738487 7.07726887307773 7.51414738315037 7.35185399151192 6.33040037006906 8.1318563405977 8.01086395306082 8.14579637574118 7.23665141869967 0.173260419716387 0.167072057179220 0.164058861413561 0.163014268910205 0.163014268910205 0.165089694507145 0.169036085779198 0.164974559921526 0.171080338391674 0.166107088591354 0.164864319287762 0.166574469745445 0.16604635560357 0.172850922653884 0.164651043220304 0.163014268910205 0.178132026495531 0.170914901902465 0.167804653200589 5 5 + 19124678 19125035 19124876.636 19123567 19125575 + gene protein_coding_gene TRUE TRUE AT5G47050.1 ATP binding / protein binding / shikimate kinase/ zinc ion binding similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G17680.1); similar to hypothetical protein 40.t00029 [Brassica oleracea] (GB:ABD65150.1); contains InterPro domain Shikimate kinase; (InterPro:IPR000623); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0086331821865755 -0.0982278637844084 0.92358741435 1 0.0499598950322058 14.7540778170406 -0.0086331821865755 0.0614933046609422 AT5G66010_at 6.84200301091255 6.04814461940248 7.45838795306243 7.09086253661025 7.34724992718982 6.8282668196692 5.41530895204773 5.07553013407165 5.27346644550401 5.85573571710060 6.50004032577008 6.51674569504043 6.5398242130091 6.76406607100531 6.19088341590055 6.56727888587845 6.92196701702141 6.14353283489182 6.24408715281281 0.192531127262350 0.188182244805412 0.198039781968276 0.202519651399975 0.194197981075936 0.206273146664185 0.194067701122784 0.190515911955362 0.193442230737146 0.192267527559241 0.184166432657692 0.181110051287922 0.181110051287922 0.186141697411507 0.188973120795866 0.181110051287922 0.19946006454262 0.182691808949626 0.191792797332307 5 5 + 26417386 26417944 26417595.182 26416754 26418225 + gene protein_coding_gene TRUE TRUE AT5G66010.1 RNA binding similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT3G20890.1); similar to Os12g0131000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066073.1); similar to Os11g0133600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065670.1); similar to heterogeneous nuclear ribonucleoprotein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96396.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.0136299216684534 -0.0980705031769562 0.923709397931607 1 0.04994419402646 12.6677886170143 -0.0136299216684534 0.185586841394134 AT5G26310_at 1.64947681589954 1.58232188528677 1.95186042032488 1.63736493527467 1.92033254791552 1.91101057140694 1.66457610883207 1.50816478050464 2.18043787310532 1.57242885412259 2.04496394161122 1.97253080694209 1.9397342499107 1.69479127980465 1.90495945218191 1.91049077665333 2.11447070017826 1.76003299675052 1.95824796183407 0.194923851754114 0.196345325992936 0.198450576258814 0.204156373347477 0.197221109798334 0.194774696026595 0.201740589638506 0.198109422049877 0.201109512192014 0.208400589136322 0.196172555543331 0.197200620206717 0.197411533016854 0.196561171133071 0.195462963345315 0.194774696026595 0.202521320812724 0.202314433975790 0.196714153732923 5 5 + 9235659 9236157 9235850.455 9234688 9236388 + gene protein_coding_gene TRUE TRUE AT5G26310.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein UGT72E3 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl alcohol as well as sinapic acid. The enzyme is thought to be involved in lignin- and phenylpropanoid metabolism. A knockdown mutant line (72E3KD) was obtained using RNAi silencing. No reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype, in contrast with the knockdown line constructed for UGT72E2 displayed a twofold reduction in the these phenylpropanoid 4-O-glucosides. similar to UGT72E1 (UDP-glucosyl transferase 72E1), UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G50740.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G66690.1); similar to Anthocyanidin 3-O-glucosyltransferase (Flavonol 3-O-glucosyltransferase 5) (UDP-glucose flavonoid 3-O-glucosyltransferase 5) (GB:Q40287); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.00858335859048193 -0.097539402677936 0.924121114248348 1 0.0498913877829727 3.63886434410967 -0.00858335859048193 0.0619063235849332 AT5G61470_at 1.22354917151405 1.19642008180782 1.18124607746996 1.27483643907527 0.748456894380893 1.35744333928790 1.02084162068199 1.2948995969075 0.676702518075792 1.36828391570251 1.38202056102886 1.39064106777432 0.880014944180298 1.23508268382250 1.41341463356065 1.06073257707439 1.35554663304424 1.27595969005847 1.05799238209018 0.178637787484738 0.178637787484738 0.180502910432913 0.182300975331043 0.178969765324766 0.182494940354647 0.183924424567471 0.180914846236186 0.191890536956469 0.182071554569094 0.184399355057521 0.184971101901664 0.181731245455296 0.178637787484738 0.180609809115834 0.186594238458974 0.182325859781855 0.185074727756018 0.185601495741348 5 5 + 24740452 24740979 24740760 24740096 24741209 + gene protein_coding_gene TRUE TRUE AT5G61470.1 zinc finger (C2H2 type) family protein similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G60580.1); similar to ZPT3-3 [Petunia x hybrida] (GB:BAA21927.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.0104018236196331 0.0972022830547057 0.92438246606589 1 0.0498580171534801 2.30396308802774 0.0104018236196331 0.116791694783456 AT5G04960_at 1.24202739658637 0.96398182504106 1.18506769934685 1.15237989993478 1.01038357579261 1.56974309045573 1.07943523733893 1.16144518068921 1.15223359990812 0.938651261542951 1.12551885141025 1.51009703179461 0.955537399713697 0.78583446370533 0.931766683836619 1.12850775457879 0.969920137753376 0.865970620308134 0.876595521514515 0.206290259724273 0.208447953342219 0.207973720013279 0.216054135233839 0.207393504755642 0.206424566832308 0.209929290192597 0.205064593905292 0.206271389182979 0.208004890512075 0.206333092619362 0.211710027012013 0.205064593905292 0.206242958705944 0.211386241392740 0.209030905374752 0.205689452439502 0.216755076650519 0.207138895764262 5 5 + 1463240 1463780 1463461.818 1461911 1463970 + gene protein_coding_gene TRUE TRUE AT5G04960.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G10710.1); similar to Pectinesterase-3 precursor (Pectin methylesterase 3) (PE 3) (GB:Q43111); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Plant invertase/pectin methylesterase inhibitor; (InterPro:IPR007186); contains InterPro domain Pectinesterase; (InterPro:IPR000070); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) 0.00998117516634606 0.0960402385401413 0.925283412067359 1 0.0497438731052444 2.18221011091959 0.00998117516634606 0.109173565578327 AT5G67230_at 2.58644788954535 3.11192516277042 3.19701231180159 3.60915591962789 3.6473374254725 3.66332391323849 3.55410808441549 4.00776272679295 3.54810410781887 3.30546264086703 4.54060636023075 4.32920388056573 4.19829992209541 4.1822793219148 4.25443400926453 3.84739990177936 4.14636687047926 4.49495864458537 2.74338497906162 0.216501836832254 0.207860025729838 0.212223117308193 0.214943600959768 0.209360319291046 0.210244378906994 0.214453434262320 0.208089849652383 0.210331639330071 0.214593278100861 0.215935195915410 0.210829329494812 0.216249955991293 0.224618358569931 0.214576626849948 0.206969589570358 0.237404023925541 0.210303206425162 0.216473384746624 5 5|0 +|/ 26840731 26841283 26840949.3 26839704 26841554 + gene protein_coding_gene TRUE TRUE AT5G67230.1 glycosyl transferase family 43 protein similar to glycosyl transferase family 43 protein [Arabidopsis thaliana] (TAIR:AT4G36890.1); similar to glycosyltransferase [Poncirus trifoliata] (GB:CAI94901.1); contains InterPro domain Glycosyl transferase, family 43; (InterPro:IPR005027) 0.0112072059191335 0.095829468279125 0.925446836408175 1 0.0497233165958262 7.14622294076487 0.0112072059191335 0.139740630608263 AT5G43850_at 10.8891878717461 10.9461892121407 12.1821669251269 12.2927337694371 12.2165255208186 12.1202431208840 12.1278303785847 12.2983390304817 11.5044670867733 11.9112281488406 11.9015891319165 11.5658728782811 12.4171368811323 12.184442809123 11.6265967963052 12.3781010792237 12.2953371009975 12.1601871956687 11.6809873029583 0.0820578531285354 0.0752922888043832 0.0827420064807877 0.076500792563837 0.0745812191837686 0.078937342533364 0.0769522561069878 0.0745812191837686 0.0865058183993338 0.0752380408516252 0.0757870020641032 0.0753139547215698 0.0764035677061385 0.0773196305542029 0.0752856040072336 0.0745812191837686 0.0838469296995392 0.077742165927589 0.0746033864065086 5 0|5 /|- 17644618 17646052 17645127.875 17644409 17646386 - gene protein_coding_gene TRUE TRUE AT5G43850.1 ATARD4; acireductone dioxygenase (Fe2+-requiring)/ metal ion binding Identical to 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 (EC 1.13.-.-) (Aci-reductone dioxygenase 4) (ARD4) [Arabidopsis Thaliana] (GB:Q8H185;GB:Q8LCE2;GB:Q9FG79); similar to ATARD2, metal ion binding [Arabidopsis thaliana] (TAIR:AT4G14710.2); similar to ARD-like protein [Brassica juncea] (GB:AAR03591.1); contains InterPro domain Cupin, RmlC-type; (InterPro:IPR011051); contains InterPro domain Cupin region; (InterPro:IPR007113); contains InterPro domain Acireductone dioxygenase, ARD; (InterPro:IPR004313) -0.00791986087527463 -0.0953142221929386 0.925846356489986 1 0.0496732542329716 23.766678060455 -0.00791986087527463 0.0401463251006293 AT5G43530_at 1.52709935497489 1.11695205720903 1.81007328391056 1.45577726248218 1.52330200107307 1.65520431019992 1.65210766653537 1.37741934110703 1.58661194311878 2.05573301414465 1.61287789789655 1.80396247674420 1.84990896707491 1.52807393731791 1.98585597377152 1.44637678227092 2.384886406036 2.15756330933089 1.79434594695662 0.195464088276573 0.201301465544781 0.194112095636241 0.200770283909819 0.192355704165483 0.193280878568675 0.197649375351172 0.192933807752567 0.199893056095661 0.199441131432751 0.191684049574142 0.196229478010139 0.195554832372345 0.190308319410700 0.195723595615718 0.190156274587192 0.192310823407582 0.201524426793614 0.194079380100195 5 5|0 +|/ 17511200 17512014 17511501.222 17506555 17512058 + gene protein_coding_gene TRUE TRUE AT5G43530.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein Identical to Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) [Arabidopsis Thaliana] (GB:Q9FIY7); similar to RAD5, ATP binding / DNA binding / helicase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22750.1); similar to putative DNA repair protein [Ipomoea trifida] (GB:AAS79594.1); similar to Os04g0177300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052168.1); similar to OSJNBa0096F01.3 [Oryza sativa (japonica cultivar-group)] (GB:CAE04094.3); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.00984130064633715 -0.095264650158162 0.925884795612301 1 0.0496684519190862 3.34395116979253 -0.00984130064633715 0.107600259416301 AT5G55710_at 8.11372467250287 8.597844904481 8.87787275192796 8.91425496116985 9.4579957231314 8.89977775580764 8.69777574016341 8.83573655249993 8.57072023523414 7.797109477711 9.20812670216038 9.34321658812832 8.8719898201781 9.2188728614182 9.16092952022757 9.28604533781885 8.78738645040633 9.32763237705038 7.67945420883575 0.156078988103564 0.150908343633407 0.16018025280978 0.152640160870080 0.156831553619119 0.157443414812589 0.161252382626157 0.154027696799557 0.169174829133556 0.177444397883986 0.154092271895956 0.16043523311616 0.155611654477349 0.170039393595040 0.16171980790996 0.157699893044583 0.161071927048275 0.165181214823578 0.158338853931677 5 5 - 22572282 22572737 22572523 22572104 22572876 - gene protein_coding_gene TRUE TRUE AT5G55710.1 similar to tic20 protein-related [Arabidopsis thaliana] (TAIR:AT2G47840.1); similar to Os02g0726600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047992.1); similar to hypothetical protein Tery_3886 [Trichodesmium erythraeum IMS101] (GB:YP_723396.1) -0.0106872472684290 -0.0948085809531938 0.92623844986765 1 0.0496243870118653 17.3825160149274 -0.0106872472684290 0.130232867483782 AT5G56880_at 2.55656980669845 2.22173616895377 2.74755650564802 2.42836326762606 2.64812820030308 2.39502407109676 2.69523910855971 2.14682397967026 2.76535375760835 1.9877115625848 2.34601367345389 2.48378614946554 2.54645434510254 2.39442437947908 2.35032616346584 2.46677326772503 3.16035681434189 2.66780280155539 1.737680677283 0.220755554907024 0.227465859251486 0.216097009151746 0.224009329771182 0.221750441486681 0.216673944998565 0.227947343425358 0.215823892659472 0.212253054065192 0.213814976692555 0.218995310351118 0.217976283167808 0.215778454634484 0.224838063008134 0.226715076327856 0.217171305774178 0.212747012695711 0.240625137050999 0.214043823248931 5 5 - 23026438 23026749 23026579 23026324 23026935 - gene protein_coding_gene TRUE TRUE AT5G56880.1 unknown protein 0.0107051012374853 0.0944432474857365 0.926521756079728 1 0.0495892411565321 4.8377172378107 0.0107051012374853 0.131660227289542 AT5G17990_at 9.95388099445497 9.97341519037579 10.7888076524226 10.7845788196635 9.92949444868228 9.63701734366523 9.47572752456566 9.42682288926749 8.33302929864578 9.07752442865102 9.65348496776291 9.84431136704914 9.12582801560536 9.46986726687977 9.71372864911618 9.55427449709591 9.08877074771691 9.59027313230093 8.51449416107618 0.113683716921501 0.109284717490153 0.10988025685311 0.109315617765106 0.104992837173762 0.1048634769344 0.109355940816367 0.106344426363307 0.139594035468472 0.1048634769344 0.113933580300808 0.108536083369130 0.111625482339152 0.109646700838770 0.108990458764683 0.1048634769344 0.111006968532116 0.108729240351055 0.106700156419154 5 5|0 +|/ 5958782 5959579 5959139.111 5957215 5959907 + gene protein_coding_gene TRUE TRUE AT5G17990.1 TRP1 (TRYPTOPHAN BIOSYNTHESIS 1); anthranilate phosphoribosyltransferase Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. Identical to Anthranilate phosphoribosyltransferase, chloroplast precursor (EC 2.4.2.18) (PAT1) [Arabidopsis Thaliana] (GB:Q02166;GB:Q42557); similar to IMP dehydrogenase/GMP reductase [Medicago truncatula] (GB:ABE93573.1); contains InterPro domain Glycosyl transferase, family 3; (InterPro:IPR000312); contains InterPro domain Anthranilate phosphoribosyl transferase; (InterPro:IPR005940) 0.00800402264305689 0.0937115935051699 0.927089166032285 1 0.0495192617509182 19.0695930878365 0.00800402264305689 0.0514336360365273 AT5G06720_at 0.491225951849375 0.604484484520134 0.146902849734565 0.235177231202889 0.193249234866619 0.586474331706985 0.566246779606877 0.170483181222283 0.571584224368268 0.966751444126729 0.481130472474457 1.04860492702305 0.613598486179855 0.918828637304233 0.822478928170455 0.99116734099899 0.736096967496632 1.83094306657286 0.395448012250181 0.194108268656511 0.193112043810631 0.192383924406322 0.191471410076559 0.194196844609313 0.193854385555911 0.197182424539672 0.197587512235550 0.199964516695729 0.192536662970166 0.194702030381134 0.192640123842046 0.199222558539181 0.191471410076559 0.194455680317329 0.191734425901186 0.191895896182661 0.218716247420287 0.197088968563150 5 5|0 -|/ 2077642 2078091 2077797.778 2077421 2079006 - gene protein_coding_gene TRUE TRUE AT5G06720.1 peroxidase, putative Identical to Peroxidase 53 precursor (EC 1.11.1.7) (Atperox P53) (ATPA2) (PER53) [Arabidopsis Thaliana] (GB:Q42578); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G06730.1); similar to Peroxidase A2 (GB:P80679); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016); contains InterPro domain Plant peroxidase; (InterPro:IPR000823) 0.00938501329653123 0.0936055076609432 0.927171440926135 1 0.049509160214459 1.16175583735170 0.00938501329653123 0.0996943066998872 AT5G55080_at 1.58858452667949 1.62308924013051 2.05567943412635 2.15411158668820 1.21423242546119 1.98442802920600 1.70400620193962 1.42122199906006 2.01541398362838 2.25409453760088 1.76816598959731 2.3386459167464 1.82897872812618 1.67362666059807 2.12656674388827 1.84393937492098 2.69080088416393 1.95244096420078 1.78602175305849 0.214897999730357 0.214154079042131 0.221925810208905 0.224698947055519 0.222516807307869 0.218503026763785 0.222194111276351 0.216384673059584 0.222054051252119 0.220815482851397 0.216873287640420 0.213545607031109 0.225216853036098 0.222779377341536 0.225214712278264 0.223319173884628 0.214505753666906 0.215950038193812 0.224442729125369 5 5|0 -|/ 22368838 22370103 22369372.778 22368802 22370284 - gene protein_coding_gene TRUE TRUE AT5G55080.1 ATRAN4 (RAS-RELATED NUCLEAR PROTEIN 4); GTP binding A member of RAN GTPase gene family. similar to RAN3, GTP binding [Arabidopsis thaliana] (TAIR:AT5G55190.1); similar to GTP-binding nuclear protein Ran/TC4 (GB:P38548); contains InterPro domain GTP-binding nuclear protein Ran; (InterPro:IPR002041); contains InterPro domain Small GTP-binding protein domain; (InterPro:IPR005225); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras; (InterPro:IPR013753); contains InterPro domain Guanine nucleotide binding protein (G-protein), alpha subunit; (InterPro:IPR001019) -0.0109586622284691 -0.0924872906676667 0.92803872844948 1 0.0494033778601785 3.74137205501617 -0.0109586622284691 0.143128619216841 AT5G14510_at 2.18834897879515 2.62398155460044 2.17753154937645 2.31368435738272 2.16890610051969 2.01289643377449 1.8768866657611 1.8482894392104 2.56354880931043 2.62149339405637 3.21090859264213 3.42403914228424 2.4603178277913 2.61512296325952 3.67014240665083 3.14570838803752 3.12800422761812 2.75313207906139 2.48326096713594 0.211695803829356 0.212696728701513 0.212628959966692 0.209508255523086 0.212819055371896 0.219730204238324 0.214580906838048 0.214607699691508 0.229831044915502 0.211663646286035 0.210757502350927 0.210265507048035 0.212594442367625 0.209508255523086 0.218981561961393 0.209508255523086 0.216611799002983 0.219055764299486 0.211470470769234 5 5 - 4678130 4678703 4678462.091 4677976 4679197 - gene protein_coding_gene TRUE TRUE AT5G14510.1 armadillo/beta-catenin repeat family protein similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G12710.1); similar to Os01g0112500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041814.1); similar to arm repeat-containing protein [Nicotiana tabacum] (GB:AAO61490.1); contains InterPro domain Armadillo; (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) -0.00871406555426074 -0.0921710878338928 0.928283992764377 1 0.0493736955158888 4.95482714005374 -0.00871406555426074 0.0836178477840109 AT5G13590_at 4.0846916138634 4.1944124610194 5.27715320081084 4.56525349004641 5.7335523920235 5.04006615950904 4.8909059803477 4.01006596447089 3.43921846744928 3.65588446493531 3.98061531305078 4.14847818036326 4.41371444125059 4.38580343392508 3.80937820739501 4.51882286542947 4.46975752477540 4.16641133832205 3.43499961968318 0.204900436770398 0.204900436770398 0.208376362480732 0.204900436770398 0.213463204950444 0.217621414881178 0.204900436770398 0.210523577500445 0.218742246877845 0.21345244264222 0.206786340688676 0.204900436770398 0.204900436770398 0.204934719953749 0.209527236161714 0.207599225470954 0.208567950519922 0.204900436770398 0.212576148315308 5 5 - 4374731 4375285 4375059.636 4374721 4378478 - gene protein_coding_gene TRUE TRUE AT5G13590.1 similar to unnamed protein product; gene_id:MSH12.5 unknown protein [Medicago truncatula] (GB:ABE91365.1) -0.0148200025839894 -0.0912142380397107 0.929026225621432 1 0.049284493040778 8.59784108130467 -0.0148200025839894 0.230600917518349 AT5G08535_at 6.48932171031458 6.76912276187538 7.72128859804033 7.81766845181687 8.06958764594748 7.96938863724771 6.40932113070094 6.92103141024966 6.62051556070409 6.26566306272652 7.15618833828261 7.2297209030152 7.52255427599318 7.63018396824294 6.93416123678657 7.60822887078262 7.30137062751313 7.09203140835297 6.56396045550047 0.178026951970752 0.167491390527299 0.170508490400550 0.178866420506795 0.169147255371608 0.178727537805787 0.177818324244765 0.166234122992852 0.172750030871229 0.184388022035329 0.169121263189048 0.166234122992852 0.173883071159676 0.168682629614159 0.17535570571781 0.170236128617518 0.169593569285742 0.168099922388239 0.170723118791564 5 5|0 +|/ 2762460 2763286 2762765.1 2762030 2763437 + gene protein_coding_gene TRUE TRUE AT5G08535.1|AT5G08535.2 D111/G-patch domain-containing protein similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52350.1); similar to Os10g0491900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064928.1); similar to Y55D9A.2a [Caenorhabditis elegans] (GB:NP_502414.1); contains InterPro domain D111/G-patch; (InterPro:IPR000467) 0.00921440761181169 0.0905084326905318 0.929573767576716 1 0.0492192897854462 14.1671836165732 0.00921440761181169 0.103755609742929 AT5G24900_at 1.33344491817556 0.897769248428251 1.36331501900971 0.992893733860242 1.30477437260679 1.38740260006649 1.45510287238487 0.788413364832354 1.65793667693481 1.43197012315775 1.4025183276521 1.01389361867567 1.51227292106414 1.76875278594394 1.24341062030829 1.52877956347067 1.66230772975882 2.18869354230228 1.47854983511746 0.206325767544075 0.202127828894162 0.211237906410144 0.205262794235874 0.202127828894162 0.215194377567278 0.206554429936755 0.216728071162369 0.208732152738261 0.209283170184887 0.208141959464552 0.202127828894162 0.206587783090164 0.20741747596925 0.207246185925000 0.202127828894162 0.217589691336516 0.207973442469220 0.203030746922217 5 5 - 8564024 8564556 8564290.364 8563812 8566815 - gene protein_coding_gene TRUE TRUE AT5G24900.1 CYP714A2 (cytochrome P450, family 714, subfamily A, polypeptide 2); oxygen binding member of CYP714A similar to CYP714A1 (cytochrome P450, family 714, subfamily A, polypeptide 1), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G24910.1); similar to Os12g0119000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066011.1); similar to putative cytochrome P450 [Lolium ri (GB:AAK38085.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) -0.0110482834361552 -0.0898892019977455 0.930054179106119 1 0.0491625008401464 2.72183827469570 -0.0110482834361552 0.152673797168638 AT5G30500_at 1.78113935439355 1.61243590975087 1.93185364514709 1.91589788275851 1.55190586637311 1.94551910001976 1.35964529477168 1.76153497702720 2.25348273073784 2.20070948025685 2.01118186196236 2.32443945799155 2.06608759902721 2.37382056663319 2.11709429830338 1.99327613738123 2.14571232987159 2.76843307622045 1.9282312950301 0.197325642594268 0.196065114329418 0.190069570436262 0.212262465318905 0.192198092019022 0.196080511817893 0.199990289632832 0.196404143175055 0.190069570436262 0.198502900446030 0.199156859183762 0.192211264071428 0.195491146387418 0.197878210740201 0.200457962582054 0.198259504147035 0.201160914129409 0.195236933483677 0.199748250191692 5 5|0 +|/ 11633343 11634129 11633701.2 11632575 11634156 + gene protein_coding_gene TRUE TRUE AT5G30500.1 galactinol synthase, putative similar to ATGOLS6 (ARABIDOPSIS THALIANA GALACTINOL SYNTHASE 6), transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT4G26250.1); similar to galactinol synthase [Cucumis melo] (GB:AAL78687.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) -0.00902075757046955 -0.0893066825980055 0.930506135982443 1 0.0491094339475772 3.90873158774629 -0.00902075757046955 0.101670481435671 AT5G51350_at 4.63280291502251 4.57605808710217 3.76330733738341 4.20123137077001 4.3386383151418 5.00233324490847 3.13018149216761 3.31874019874645 3.05431555485326 3.53033467127038 4.54666710793487 5.00681798851978 4.19229175847829 4.26749063408142 4.59281233069607 4.04548650844868 3.73895899488516 4.692649751043 3.31796466300739 0.192472560551905 0.195751758109294 0.198042039098281 0.195549964946951 0.192766188019411 0.205128720016982 0.195295701086886 0.200926319774372 0.194489667122754 0.200533424133016 0.195249688137373 0.198427907736665 0.199015825248587 0.192197346611320 0.192594625945571 0.195405985808777 0.192152218257028 0.196621951869737 0.199546136939029 5 5 - 20885111 20885684 20885376.636 20884828 20887971 - gene protein_coding_gene TRUE TRUE AT5G51350.1 leucine-rich repeat transmembrane protein kinase, putative similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G61480.1); similar to Protein kinase; Actin-binding, actinin-type [Medicago truncatula] (GB:ABE92015.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.0103827081114816 0.0880895633392093 0.931450539984702 1 0.0489996674460558 7.96354587714093 0.0103827081114816 0.141761536600519 AT5G41150_at 3.48255682689953 3.73930553475298 4.49886704839142 4.52454581160669 5.92646239472864 4.96111139409524 4.18152231213203 3.76732115910028 4.41788295376727 3.92695660713779 5.11114342336298 4.86554456859797 4.84113898365211 4.89310879059989 4.51042607743914 5.12721382973408 4.08999987798717 4.76070178741785 4.43664645847742 0.238983287671006 0.235944980574311 0.240261617520198 0.23639915445770 0.238274332304434 0.239450815659997 0.239626659713345 0.235944980574311 0.244058007403886 0.237832829573904 0.240926352970409 0.240326243629878 0.244710392181684 0.250709113050562 0.240939552551919 0.241386342387536 0.246667565793886 0.239190284659763 0.235944980574311 5 5 - 16490291 16490990 16490635.545 16489992 16494241 - gene protein_coding_gene TRUE TRUE AT5G41150.1|AT5G41150.2 UVH1 (ULTRAVIOLET HYPERSENSITIVE 1) Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins Identical to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) (UVH1) [Arabidopsis Thaliana] (GB:Q9LKI5;GB:Q9SE36;GB:Q9SPL7); similar to Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4 (ISS) [Ostreococcus tauri] (GB:CAL54856.1); similar to Os03g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048645.1); contains InterPro domain RuvA domain 2-like; (InterPro:IPR010994); contains InterPro domain ERCC4; (InterPro:IPR006166)|Identical to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) (UVH1) [Arabidopsis Thaliana] (GB:Q9LKI5;GB:Q9SE36;GB:Q9SPL7); similar to Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4 (ISS) [Ostreococcus tauri] (GB:CAL54856.1); similar to Os03g0100400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048645.1); contains domain DNA REPAIR ENDONUCLEASE XP-F / MEI-9 / RAD1 (PTHR10150) 0.012260215332638 0.0877034697794016 0.93175014624772 1 0.0489651615977195 8.90291406378488 0.012260215332638 0.187190794669158 AT5G03060_at 1.30097413726949 1.25902263590859 1.35778960697605 1.59760761970232 1.46464608769633 1.45675255633494 1.39164709625598 1.3385682773209 1.65074401867452 1.69791407855678 1.68303379490615 1.64513986646952 1.77058727703906 1.46670235353132 2.09959575928313 1.78297398896396 2.0381104979022 1.71684835516 1.70659298167810 0.213741983699127 0.212971582298262 0.208977294948353 0.213617004945915 0.209734045924897 0.208977294948353 0.214933226400456 0.214434073964943 0.213781093477625 0.211237916066444 0.214687596409056 0.21171658691659 0.217064771555141 0.220009514873230 0.21098818104616 0.21237114989934 0.212313632958048 0.209568131534639 0.212353598390371 5 5|0 -|/ 716755 717197 717004.3 716721 717677 - gene protein_coding_gene TRUE TRUE AT5G03060.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11100.2); similar to hypothetical protein TTHERM_00019700 [Tetrahymena thermophila SB210] (GB:XP_001008452.1) 0.00728203005026273 0.0870452317162117 0.932260960554803 1 0.0489066826625161 3.12610484199643 0.00728203005026273 0.0431431477618663 AT5G54230_at 0.796395408767271 0.752569246772087 1.15888437715259 0.981653435550516 0.672115924579488 0.559008019816648 0.612196610299605 0.784028372589841 1.16927636718851 1.03625171352889 1.10023287170926 0.65383485421927 1.34734238569676 0.646730234489547 1.16164204674877 0.68751748907057 1.33509574451557 1.46121206076167 0.850424037162393 0.195676412734909 0.20060251172451 0.201195751054342 0.200148009222952 0.201573160182991 0.201920418558770 0.203018154342424 0.203955133807171 0.201663522239847 0.204274259236278 0.203722089193472 0.201598356403078 0.195676412734909 0.207368961232354 0.203707737730492 0.200009769395053 0.206222362654293 0.19820025310265 0.201972179299353 5 5 - 22033698 22034110 22033914.091 22033476 22035159 - gene protein_coding_gene TRUE TRUE AT5G54230.1 MYB49 (myb domain protein 49); transcription factor Encodes a putative transcription factor (MYB49). similar to ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G21440.1); similar to putative MYB transcription factor [Populus x canescens] (GB:AAN05422.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.0072804906590564 0.0860919263935607 0.93300081341425 1 0.0488227693322567 1.82353225787169 0.0072804906590564 0.0475982414865215 AT5G59220_at 2.36373567416824 2.05443349115192 3.95359389748987 3.59045004011920 2.48285216881061 2.58040047816955 2.77354259388628 3.11405108058721 2.48491267479375 2.31441222361314 2.57673364038131 1.90395962617093 2.26058754641413 2.28446522732809 2.35229805524791 2.41515368304908 2.7956009608804 3.15295233731638 2.36762728101172 0.209736228042647 0.204148787512883 0.219748565925248 0.230735260793279 0.206797796832524 0.212992189229296 0.204148787512883 0.208566704001826 0.222887416756012 0.207544034612714 0.219546125020454 0.2141652700937 0.214155177700452 0.215313482919862 0.218836435606788 0.214064137553382 0.220445335148118 0.208872986151544 0.211027369986871 5 5|0 -|/ 23911952 23912939 23912314.556 23911630 23913845 - gene protein_coding_gene TRUE TRUE AT5G59220.1 protein phosphatase 2C, putative / PP2C, putative similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT1G07430.1); similar to protein phosphatase 2C [Nicotiana tabacum] (GB:CAC10358.1); contains InterPro domain Protein phosphatase 2C-like; (InterPro:IPR001932) 0.0087321695310733 0.086075975485696 0.93301319335697 1 0.0488213731248688 5.29248390025022 0.0087321695310733 0.102818794678087 AT5G51280_at 7.9999251127101 8.09786778938718 8.9083956821355 8.94174956048946 8.4795669592583 8.41181488245844 7.4980195783079 7.80213584282937 7.00350717823473 7.0855847581196 7.99570417741511 8.40433597718006 8.10190918091578 8.23192351133126 7.82850808098482 8.35676395624222 8.56925496851452 8.10015697968236 7.44852461099786 0.166345163004098 0.172143784968727 0.166451994982173 0.166804657299342 0.171952902271496 0.177462239062384 0.168465537285971 0.179880974616870 0.187274816331712 0.172899552197179 0.171209170261381 0.165597176684802 0.165022383163526 0.167250896809944 0.178692297950651 0.171417737756038 0.164452049889766 0.169749443031753 0.176771528413486 5 5 + 20860285 20860833 20860648.545 20858474 20861032 + gene protein_coding_gene TRUE TRUE AT5G51280.1 DEAD-box protein abstrakt, putative Identical to Probable DEAD-box ATP-dependent RNA helicase 35 (EC 3.6.1.-) (RH35) [Arabidopsis Thaliana] (GB:Q9LU46); similar to DEAD-box protein abstrakt, putative [Arabidopsis thaliana] (TAIR:AT4G33370.1); similar to putative DEAD-box protein abstrakt [Oryza sativa (japonica cultivar-group)] (GB:BAD38045.1); similar to putative DEAD-box protein abstrakt [Trifolium pratense] (GB:BAE71218.1); similar to DEAD/DEAH box helicase, putative [Medicago truncatula] (GB:ABE77883.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) 0.00731342528324808 0.0843623607419176 0.934343284941097 1 0.0486728824142527 15.9563219858557 0.00731342528324808 0.0568142165305117 AT5G09310_at 7.11434197742418 7.89249383670747 7.93161835722965 8.36394459047028 8.68056649640441 7.960276622753 7.11582098420285 7.3417772894699 7.25956281975067 6.50727247027629 8.00410185076935 7.69997665123183 7.74948157054996 8.22865738815264 7.68759688676314 8.05016533405261 7.79543819666104 7.87977732283218 6.74160211063363 0.195406066850207 0.179145839845057 0.198657095536110 0.182735238204028 0.186064452315445 0.190937625555151 0.182627598712051 0.183123270577095 0.197987041020449 0.193927148120376 0.182321159446150 0.179073408317251 0.191752178754558 0.184332702156219 0.182793924103902 0.179014620248516 0.190908598671842 0.180019364908637 0.181025662792321 5 5 - 2887450 2888452 2887962.182 2887194 2888539 - gene protein_coding_gene TRUE TRUE AT5G09310.1 Identical to Gamma-secretase subunit PEN2-like protein [Arabidopsis Thaliana] (GB:Q9FY84); similar to presenilin enhancer 2 homolog [Rattus norve (GB:NP_001008764.1); similar to Os01g0960000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045463.1); similar to Presenilin enhancer 2 homolog [Danio rerio] (GB:AAH92674.1); contains domain FAMILY NOT NAMED (PTHR16318) -0.0123944725862564 -0.0841036210828005 0.934544134602246 1 0.0486507207997351 15.1616276195061 -0.0123944725862564 0.201985267120338 AT5G52170_at 1.37542026569859 1.16546427852782 1.67294273766961 1.63646787499104 1.58715181876524 1.50111718229047 1.41351516301934 1.56115315913957 1.91658156659725 1.86453303430311 1.90345864433933 1.55723193814907 2.15563578550963 1.70176137966888 2.07005275447465 1.71262141529835 2.21302845493947 2.2450186438 1.98923233564889 0.213654716163186 0.209549275278846 0.209549275278846 0.209549275278846 0.215257510199038 0.212895044993827 0.211255943268822 0.219095640839783 0.214111512025309 0.215402632630349 0.212726932318242 0.209549275278846 0.216030574217991 0.214839561255062 0.209747443008739 0.209549275278846 0.213426460105297 0.214754226702378 0.227064880266535 5 5 + 21216513 21217155 21216851.909 21214200 21217185 + gene protein_coding_gene TRUE TRUE AT5G52170.1 homeobox-leucine zipper family protein / lipid-binding START domain-containing protein similar to ANL2 (ANTHOCYANINLESS 2), transcription factor [Arabidopsis thaliana] (TAIR:AT4G00730.1); similar to HDG1 (HOMEODOMAIN GLABROUS1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G61150.1); similar to homeodomain protein HB2 [Picea abies] (GB:AAL83725.1); similar to Lipid-binding START; Homeodomain-related [Medicago truncatula] (GB:ABE86312.1); similar to START domain, putative [Medicago truncatula] (GB:ABE88255.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Lipid-binding START; (InterPro:IPR002913); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) -0.00708926720222858 -0.0838998165158297 0.934702343627588 1 0.0486333123552999 3.4233041129488 -0.00708926720222858 0.0472698643862481 AT5G65210_at 6.88105262706173 6.86053954894038 8.68675648030697 8.5189818615151 8.95698145269719 8.4115184891944 7.54428396989764 6.70955611501318 5.15750559139956 6.26103098811332 5.8892068875593 5.03529312400493 7.04420131460171 6.52847194276503 5.04867601082879 7.0380163710791 7.79167455166567 6.42587472955755 6.43346158135889 0.210517198532976 0.205310608188904 0.207143433184972 0.206213847437613 0.206229380809226 0.209883982348919 0.207035145339180 0.211470031558409 0.217759315673658 0.208049389517499 0.207848035330835 0.209997773505012 0.206216201333173 0.208123780388797 0.212158396565424 0.205043775129506 0.213967626700025 0.205043775129506 0.210913547673314 5 5|0 +|/ 26077255 26077947 26077528.1 26074849 26078330 + gene protein_coding_gene TRUE TRUE AT5G65210.1|AT5G65210.2|AT5G65210.3|AT5G65210.4|AT5G65210.5|AT5G65210.6 bZIP family transcription factor (TGA1)|DNA binding / calmodulin binding / transcription factor Identical to Transcription factor TGA1 (DNA-binding protein TGA1a-like protein) (AtbZIP47) (TGA1) [Arabidopsis Thaliana] (GB:Q39237;GB:Q8LBQ9;GB:Q9FJP4); similar to TGA4 (TGACG MOTIF-BINDING FACTOR 4), DNA binding / calmodulin binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G10030.1); similar to 4D11_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67521.1); contains InterPro domain Eukaryotic transcription factor, DNA-binding; (InterPro:IPR008917); contains InterPro domain bZIP transcription factor, bZIP_1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) -0.0111333965632547 -0.0832719990238756 0.935189723173564 1 0.0485799509311273 13.9716302781442 -0.0111333965632547 0.175022318306132 AT5G47635_at 1.35050283928581 1.06797453384574 1.80777686348304 1.42658158746938 1.21148037866336 1.57403289221683 0.685444592277369 1.38313313383304 1.74757568888813 1.50796055375547 1.11930723242857 1.34863087105827 1.49570935404072 1.59660352924769 1.21879422718807 1.21567942335964 1.88699734294637 1.83045670945647 1.75554375296128 0.223780305122702 0.213250415048582 0.219467068793484 0.215022688416246 0.217436526838013 0.22031763430525 0.215598818899008 0.215576170129938 0.225650959799252 0.223489260899764 0.221974846551321 0.218242642912259 0.218618794871234 0.219250232245682 0.218405552178739 0.212680732036408 0.218480979834182 0.212680732036408 0.224060606224970 5 5 - 19324510 19325008 19324678.545 19324279 19325121 - gene protein_coding_gene TRUE TRUE AT5G47635.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40113.1); similar to hypothetical protein 31.t00008 [Brassica oleracea] (GB:ABD65108.1) -0.0104710638899064 -0.083190242467962 0.935253193471963 1 0.0485730314764296 2.88055702000966 -0.0104710638899064 0.158922770496673 AT5G43960_at 7.84531517799733 8.36515492923574 8.52251216181545 8.84958230147892 8.55467055721243 8.50964223883918 7.93520920099506 7.53989744083117 6.23770323187111 6.66208746506925 7.5844167425628 7.9968451361832 7.37998327695926 7.32349221458383 8.45280644868155 7.72035290684281 8.05323792382588 7.6287729141546 6.67102251717295 0.231291409817467 0.218602281106556 0.218891972368754 0.222626396127070 0.229102024162563 0.249755031574293 0.224579628262189 0.218100150220779 0.247206938800600 0.221132317728645 0.227506741326605 0.226534525480832 0.225987533999235 0.228414334841233 0.223028570347917 0.228450861772605 0.238048023116034 0.224414454876105 0.243347646554182 5 5|0 -|/ 17706384 17707423 17706981.4 17706015 17709166 - gene protein_coding_gene TRUE TRUE AT5G43960.1|AT5G43960.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to RNA-binding re (GB:ABE92036.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71299.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504)|similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to RNA-binding re (GB:ABE92036.1); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) 0.00922107761547086 0.0829490876872309 0.935440412594044 1 0.0485526609124398 15.41079442614 0.00922107761547086 0.126638558161467 AT5G59580_at 1.96849082846402 1.45884638302221 1.78696162094487 1.87205126127559 1.46308032258287 1.32681552764966 1.38852347519047 1.37631944679342 1.54102588118680 1.50380665495486 1.58028102949488 1.61942440122896 1.81310300766288 1.65463643778382 1.19543458216263 1.58035229532947 1.96730993724300 2.29359687620327 1.63932105989982 0.190002978803375 0.203210425443197 0.188397377738594 0.192362372961836 0.191053141487860 0.2017446284565 0.191301093447342 0.201901145483458 0.196344663133828 0.191435096623610 0.196229570990538 0.191614467821679 0.188397377738594 0.193754352839098 0.194735592307319 0.189667675142043 0.189946202764153 0.195200931695297 0.193529960047592 5 5 - 24023531 24024020 24023787.545 24023305 24024915 - gene protein_coding_gene TRUE TRUE AT5G59580.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G59590.1); similar to glucuronosyl transferase homolog, ripening-related - tomato (fragment) (GB:S39507); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) -0.00808990050253766 -0.0828720254878901 0.93550024025192 1 0.0485461638489887 3.21733703469161 -0.00808990050253766 0.0924984447159358 AT5G23050_at 4.28832401640031 4.87176321264579 5.71615252140068 5.45969111052449 5.93659503527764 5.8023878794655 4.75578508167625 3.98000059355840 2.94839122578584 3.52988271452145 2.94991316934749 3.15554295813264 2.99175624498596 3.26026706501157 2.85921433499507 3.72148767998635 3.86162626873435 3.86321625795126 2.69567454622439 0.270749781661695 0.267178277646468 0.273688411456356 0.275764175188285 0.271894272740377 0.269592553167647 0.269847386648483 0.270842307897596 0.27746013912588 0.268271929302234 0.271347068045471 0.27579869654079 0.267178277646468 0.269620136084797 0.267178277646468 0.267178277646468 0.270366668299758 0.273507495880074 0.273919241907898 5 5|0 -|/ 7731532 7732430 7731916.4 7731272 7735442 - gene protein_coding_gene TRUE TRUE AT5G23050.1 acyl-activating enzyme 17 (AAE17) similar to ligase [Arabidopsis thaliana] (TAIR:AT1G55320.1); similar to acyl-activating enzyme 18, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF99434.1); similar to AMP-dependent synthetase and ligase [Medicago truncatula] (GB:ABE78689.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) -0.0110467616540173 -0.0825415262827122 0.93575682984347 1 0.0485183680687631 8.29676784448712 -0.0110467616540173 0.175292234881066 AT5G64690_at 1.45723623310901 1.59054792559140 1.76340311177332 1.97669695032468 1.57070796296099 1.69262412575777 1.52842616678089 1.81258670276936 1.82514469836966 1.48388694572696 2.27624828223677 1.84757166770447 1.96717631085104 2.01927405017279 1.94692687789987 1.69409043765435 1.71149570707529 2.0063813967324 2.09263526031271 0.166132555942289 0.164179814977245 0.165088160832328 0.165875270185773 0.167742052220034 0.175184163574916 0.168481411842495 0.166706602453777 0.165390963825048 0.165214645870564 0.173193902652676 0.167130195172985 0.164142064771418 0.173086460258089 0.167859399201726 0.169920942795764 0.175259087816100 0.168398505799766 0.172171033311394 5 5 + 25881155 25881713 25881397 25880095 25882004 + gene protein_coding_gene TRUE TRUE AT5G64690.1 neurofilament triplet H protein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to 80C09_2 [Brassica rapa subsp. pekinensis] (GB:AAZ41813.1); contains domain FAMILY NOT NAMED (PTHR12746); contains domain gb def: Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVP7 (At5g64690) (PTHR12746:SF1) 0.00740358093018550 0.0822938426256221 0.935949128967778 1 0.0484976099871542 3.54112926043042 0.00740358093018550 0.0689785187657649 AT5G62260_at 1.13998227582364 1.64483568630432 1.26510052394421 1.52970438728844 1.25885584135969 1.78055130792597 0.865257122109533 1.31467623941222 1.68332843643654 1.45353148363525 1.74675927107909 1.83270201705595 1.3795360451057 1.30302322683718 1.90216209370221 1.90276624352617 1.74789042411408 1.99038643175276 1.98348704140872 0.223076572240709 0.223976467938091 0.226173628615434 0.22414719732014 0.218397862393475 0.237708177504157 0.222539447563848 0.222075757721367 0.220052158491843 0.222430157842249 0.217302969787083 0.216699335025549 0.226117265498588 0.223682172969838 0.224583603836399 0.217500467624499 0.227799834248186 0.226531577832113 0.220637390520859 5 5 + 25027805 25028441 25028173.273 25026253 25028814 + gene protein_coding_gene TRUE TRUE AT5G62260.1 DNA binding similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT4G25320.1); similar to HMG-I and HMG-Y, DNA-binding [Medicago truncatula] (GB:ABE87426.1); similar to Os08g0118000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060866.1); similar to Os02g0125200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045744.1); contains InterPro domain Protein of unknown function DUF296; (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding; (InterPro:IPR000637) 0.00998814102574641 0.0806405090479716 0.937232869896867 1 0.0483606418933195 3.06608819284108 0.00998814102574641 0.154691498636379 AT5G50470_at 1.63852717584993 0.862000016206853 1.15613370311494 1.36685603226263 0.831074896254593 1.12021089106692 1.20739418998578 0.815163797090761 1.19465689730927 0.88184724977554 1.071608985743 1.32951238178806 1.57036781847093 1.25458276824579 1.38006676914523 1.29610859911553 1.48527849622438 1.59512193501350 1.47190049807260 0.219975984684529 0.212565817779603 0.212614569786074 0.227268023326106 0.217932556082092 0.207315607404069 0.216142319838062 0.216262291684902 0.217985223417204 0.210179102737993 0.207315607404069 0.209830631169834 0.220764426346995 0.207315607404069 0.213357120557245 0.207315607404069 0.216396039354585 0.210488876111800 0.215151172113105 5 5 - 20572413 20572883 20572624.455 20572346 20572984 - gene protein_coding_gene TRUE TRUE AT5G50470.1 CCAAT-box binding transcription factor Hap5a, putative Identical to Nuclear transcription factor Y subunit C-7 (AtNF-YC-7) (NFYC7) [Arabidopsis Thaliana] (GB:Q9FGP8); similar to CCAAT-box binding transcription factor Hap5a, putative [Arabidopsis thaliana] (TAIR:AT5G50480.1); similar to CONSTANS interacting protein 2a [Lycopersicon esculentum] (GB:AAS67369.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Histone-fold/TFIID-TAF/NF-Y; (InterPro:IPR007124) 0.0102059756332503 0.0799080310758398 0.937801666955573 1 0.0483008481567607 2.40248634653111 0.0102059756332503 0.162785728718078 AT5G17340_at 0.996004274050753 0.975855365377488 0.938958391770311 1.00820053381020 1.36245871869238 1.15472417051061 1.31725561582450 1.18666830646221 1.56263638543591 1.36059667319713 1.45927930503993 1.82629415600378 1.58979834025804 1.61213858148783 1.49894475727828 1.95102608548076 1.45518448698764 1.43784313278831 1.3162292673222 0.204493021943824 0.200053457160506 0.204481282750579 0.208724452605764 0.198807138088978 0.194546341844704 0.202638064400887 0.197572221419926 0.200206056741863 0.209698777606481 0.198148904948333 0.205630912849716 0.194768848269508 0.204068879993479 0.205591016221621 0.195317481809622 0.197527125317473 0.217016565578257 0.200800914344037 5 5 - 5715757 5716177 5715956.636 5715626 5716270 - gene protein_coding_gene TRUE TRUE AT5G17340.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03272.1); similar to M3.4 protein [Brassica napus] (GB:AAD24197.1) 0.00662923680033636 0.0790343169483888 0.93848018687123 1 0.0482302376421124 2.62599952922096 0.00662923680033636 0.0442584183741933 AT5G03510_at 2.21690217074559 2.01942405138441 1.90843673845493 1.83037319564650 1.91792518304718 1.95056909639379 1.86338466614311 1.87618272748999 2.01326791168760 1.42151910802947 2.47855179409670 2.48744493140688 1.81749529780790 1.80028775930184 2.44805750364965 2.22758272264242 1.99650785844104 2.68546240040273 2.05140158398562 0.227513619178075 0.229654021313662 0.237457604953218 0.242709763144847 0.232328151118764 0.227869744852422 0.220266455279291 0.225932845884803 0.237105940409798 0.224947828033294 0.220222757596307 0.225658043372089 0.229338115292074 0.226861342184153 0.222625422653099 0.226656863269267 0.225777797295861 0.225845161246332 0.224594194138027 5 5 + 880688 881189 880882.727 880224 881304 + gene protein_coding_gene TRUE TRUE AT5G03510.1 zinc finger (C2H2 type) family protein similar to nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G28200.1); similar to ZPT2-11 [Petunia x hybrida] (GB:BAA21920.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) -0.00649057399459607 -0.0785975845171998 0.938819369288417 1 0.0481952330910689 3.98360138768129 -0.00649057399459607 0.0372453439359055 AT5G45190_at 7.83164286565976 7.72330763737285 8.72099033257799 8.3196782976068 8.91476242983382 8.23914879390913 7.22596953767692 7.3850674159984 7.96379417399383 7.9188189255434 8.84576401966648 9.17736217782081 8.76610828548168 8.96654096862048 8.49907810910305 8.84149040720205 8.59278688514203 8.4203921142989 8.0754174203403 0.145100133616401 0.137370889207391 0.139311756778652 0.140033027324306 0.139728590738960 0.147048156813961 0.142664009042805 0.141065188629026 0.141525195388362 0.140882880810395 0.141099013948144 0.142484328721216 0.141040605845073 0.143420708061183 0.145923344839565 0.140029072619914 0.145367369178226 0.137370889207391 0.138323060609701 5 5 - 18295080 18295605 18295340.364 18294847 18299102 - gene protein_coding_gene TRUE TRUE AT5G45190.1 cyclin family protein similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT4G19600.1); similar to Os12g0485400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066781.1); similar to Cyclin, N-terminal domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX92940.1); contains InterPro domain Cyclin, N-terminal; (InterPro:IPR006671); contains InterPro domain Cyclin-like; (InterPro:IPR011028); contains InterPro domain Cyclin-related; (InterPro:IPR013763); contains InterPro domain Cyclin; (InterPro:IPR006670) 0.00903481959332986 0.0771740081059005 0.939925058969594 1 0.0480824769051316 16.4199211859342 0.00903481959332986 0.140009008237867 AT5G36230_at 10.0197052474239 10.2027113391601 10.3516720863838 10.3943949854266 10.6509813190403 10.4585475619175 9.8844001632573 10.0825278094759 10.0369343728363 9.88940369419806 10.9110709526878 10.8824158138524 10.7890730987441 10.7096768300778 10.7499353772489 10.6809694211447 10.5813667969294 10.6038982644525 9.73655356924204 0.0921248759758358 0.0892674901472386 0.0962089098883075 0.0915373225045209 0.0922341138488713 0.0934298087233523 0.095295449813 0.0892674901472386 0.0947684462035057 0.0948559260137144 0.0892674901472386 0.0892674901472386 0.0892674901472386 0.0922268282155575 0.091203133839507 0.0892674901472386 0.0918623320092537 0.0930893499033724 0.0951504714492584 5 5 + 14292541 14293774 14293273.545 14290614 14294256 + gene protein_coding_gene TRUE TRUE AT5G36230.1 eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein similar to eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G65220.1); similar to eIF4-gamma/eIF5/eIF2-epsilon [Medicago truncatula] (GB:ABE89800.1); similar to Os11g0414000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067760.1); similar to putative protein [Oryza sativa (japonica cultivar-group)] (GB:AAX95492.1); contains InterPro domain eIF4-gamma/eIF5/eIF2-epsilon; (InterPro:IPR003307) -0.00665381513220353 -0.0765337067895173 0.94042242352255 1 0.0480324321667180 20.5687082464195 -0.00665381513220353 0.0578121192353307 AT5G54770_at 13.4281420303159 13.6590588151257 14.0501722137985 14.0762232954439 13.9575919191065 13.9181426211675 13.8394731943221 13.9688652863850 13.9071662984430 14.1610805628603 14.6051907809285 14.4306044449362 14.5600802397547 14.5648069948823 14.2283931967381 14.4447173460313 14.3893989674386 14.6208348210903 13.9493177666876 0.0543069180086306 0.0551462351132471 0.0571271278858219 0.0542362233441509 0.0568732320964327 0.056326132160781 0.0553943179668812 0.0597837039342198 0.0651605103320672 0.0556188992989815 0.054738965441752 0.0534703863525549 0.0538615237289068 0.05458801619815 0.0539676176320239 0.0531070624955723 0.0590877884994219 0.0552787193402068 0.0598754761988987 5 5 + 22264449 22265054 22264711 22263821 22265558 + gene protein_coding_gene TRUE TRUE AT5G54770.1 THI1 (THIAZOLE REQUIRING) Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. Identical to Thiazole biosynthetic enzyme, chloroplast precursor (ARA6) (THI1) [Arabidopsis Thaliana] (GB:Q38814); similar to Thiazole biosynthetic enzyme, chloroplast precursor (GB:O23787); contains InterPro domain Thiamine biosynthesis Thi4 protein; (InterPro:IPR002922) 0.00642088404785612 0.076129282991146 0.940736580095965 1 0.0480010377552515 28.1053877844441 0.00642088404785612 0.0465320085011571 AT5G45850_at 0.066621938662619 0.20026089845581 0.0776263033126204 -0.0456887254671578 0.181146941859204 0.514102057247549 0.258311720289581 0.454325060391261 0.62199268562373 -0.0446814834359413 -0.0865444482665617 0.557143564092404 -0.152077623105792 -0.0531217340508595 0.697329957150918 0.601628429990113 0.435829585237642 0.0331016977823069 -0.334243555682644 0.210310757962515 0.206896660293123 0.213066295943478 0.203468914009204 0.204869918500217 0.204175680740927 0.198856729900134 0.210007849134863 0.213276978255886 0.197928764990613 0.201838827613145 0.198800644288531 0.204923397334449 0.201891730559144 0.219121270871847 0.204294623871696 0.200382238488626 0.206589646555977 0.206828848304286 5 5 - 18617382 18617827 18617587.444 18616986 18618797 - gene protein_coding_gene TRUE TRUE AT5G45850.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18630.1); similar to Protein of unknown function DUF688 [Medicago truncatula] (GB:ABE80249.1); contains InterPro domain Protein of unknown function DUF688; (InterPro:IPR007789) 0.00681838633258582 0.0745749421965243 0.941944090654481 1 0.0478819245117407 0.380930138063345 0.00681838633258582 0.0738978483063507 AT5G49640_at 2.77826352242585 3.5160385618921 3.65303126209646 3.86660357127191 7.41042107253823 4.11945045875817 3.53230663728561 3.03563030627584 2.81415677616175 3.29311429190592 3.02164207950690 3.20925495613375 3.06161711361199 2.51490234413166 2.50835589423448 2.74124366934970 2.27856701520065 2.86077484321539 3.47216300503753 0.223124110798021 0.232291071693061 0.223951489604331 0.234483173658719 0.259966458977024 0.246914874282547 0.230772227066968 0.223303781138437 0.227922694426312 0.227565799700312 0.222967857958168 0.222962604944543 0.222962604944543 0.222962604944543 0.236684423506982 0.228527121068987 0.228157953415461 0.225215629458362 0.23174537392861 5 5 + 20168645 20168819 20168740.545 20168389 20169068 + gene protein_coding_gene TRUE TRUE AT5G49640.1 unknown protein -0.0275717724987288 -0.074117503104377 0.942299487673162 1 0.0478473371693961 6.97281288929709 -0.0275717724987288 0.591105186490684 AT5G62320_at 1.86479595331365 1.88709145119279 1.99731429096308 1.90582598144891 1.9408195774031 2.1372930572051 2.10712978495629 1.68691376293239 1.78833839650405 2.28825854203055 2.34109060653244 2.15464693053859 2.36219944325903 1.79872902649043 2.41847055613201 2.16043623456777 2.31296991864996 2.21458191061368 1.8388282775176 0.190582510996724 0.193071487625536 0.192196616310476 0.190662794533984 0.192543782776987 0.189058487989486 0.188019547064022 0.193667496071648 0.196276073180776 0.192466056718429 0.187309717532386 0.188105079788165 0.201932346381877 0.188572520454478 0.201031491034234 0.192276672298014 0.191458248725281 0.204454485845316 0.193454445402459 5 5 - 25046180 25046839 25046466.727 25045942 25047159 - gene protein_coding_gene TRUE TRUE AT5G62320.1 MYB99 (myb domain protein 99); DNA binding / transcription factor Encodes a putative transcription factor (MYB99). similar to MYB20 (myb domain protein 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G66230.1); similar to myb-related transcription factor [Pimpinella brachycarpa] (GB:AAF22256.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) 0.00695218880932624 0.0739778781269996 0.942407968789843 1 0.047836822355512 4.03699747427627 0.00695218880932624 0.0819136539559776 AT5G52710_at 0.615918422132296 0.552573543583383 1.02580631921076 0.86864270102826 0.903180243956846 1.02549189439318 0.823312437164246 0.642552445504821 0.78627619244849 0.82862385791503 0.855711932475644 0.811835186127242 0.511068288083402 0.445361434230815 0.746468459913341 0.79499366841007 0.800674817084774 0.532618002369893 1.03887690755767 0.195688403010100 0.187018715614621 0.190311263652118 0.192445002290042 0.187018715614621 0.188061054871236 0.190193323265234 0.194786453962615 0.188161114947798 0.188888484123592 0.188951307698533 0.193869100600113 0.19242719047971 0.194354547983238 0.196924693996034 0.187018715614621 0.187018715614621 0.198689969701363 0.187018715614621 5 5 + 21394331 21394999 21394730.909 21392979 21395398 + gene protein_coding_gene TRUE TRUE AT5G52710.1 heavy-metal-associated domain-containing protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G52680.1); similar to PREDICTED: hypothetical protein [Apis mellifera] (GB:XP_001121175.1); similar to cement precursor protein 3B variant 1 [Phragmatopoma californica] (GB:AAY29120.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.0062455121307797 -0.0738126223349982 0.942536365258204 1 0.0478244029399277 1.59315164731870 -0.0062455121307797 0.0478167575926063 AT5G17180_at 1.21238550211830 1.34351501843638 1.5180955947657 1.91590862222059 0.989145546746516 1.23822350303849 0.987449286905774 1.21200139059154 1.52828358633122 1.75373992472725 1.76287756053709 1.56851665460566 1.59990264371668 2.00581635570863 1.34780405555456 1.63974115316033 1.74563922461842 1.60804600923574 1.71521695793359 0.185301762466265 0.182001127835867 0.191649337958954 0.183347297151230 0.195897857516652 0.184410866761344 0.182001127835867 0.191341115541679 0.188887339485156 0.189530841367162 0.191305948650800 0.185256440209161 0.189049832374252 0.186156949862039 0.191866484758641 0.183731207122984 0.185952382910570 0.196510397229225 0.190348583810493 5 5 + 5651521 5651780 5651633.091 5651438 5651809 + gene protein_coding_gene TRUE TRUE AT5G17180.1 calcium ion binding contains InterPro domain EF-Hand type; (InterPro:IPR011992) 0.00719200262314146 0.0735771446128823 0.942719324031065 1 0.0478067540901459 2.96486044817266 0.00719200262314146 0.09285695133754 AT5G64170_at 9.95748652361722 9.99865945592052 10.9317090842418 10.9119937393011 10.9816611283902 10.8125008429374 10.8006928726995 10.7178623857820 9.3930272658409 10.0196500822868 10.5331295822387 10.3338606188569 10.7854637853387 10.4368496755188 10.2168228011565 10.6453843926221 10.8573608492075 10.5340731661879 10.0994579583322 0.0808814484548558 0.0782261683221817 0.081709223896236 0.080970077604054 0.0780562171800626 0.0835846423092881 0.0780562171800626 0.0828248692771251 0.0910324381071031 0.0839514371321559 0.0801951887152087 0.0797971417556127 0.0784081856585866 0.0850987698208724 0.0811710172255305 0.0820432847373587 0.0801336804884627 0.0813972204773348 0.0839300665181467 5 5|0 -|/ 25690199 25691122 25690680.8 25689692 25693972 - gene protein_coding_gene TRUE TRUE AT5G64170.1|AT5G64170.2 dentin sialophosphoprotein-related similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54500.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF96328.1); similar to Os03g0387900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050262.1) -0.00597624498441496 -0.072901430633743 0.94324435172334 1 0.0477564226688863 20.8291940263000 -0.00597624498441496 0.0335386889681510 AT5G01820_at 9.3097159706283 9.60055180262478 10.7595632094902 11.0091275567912 10.6829499722342 10.7336539023699 10.1581578801230 10.3945631573027 9.55013477733336 10.0014917695402 9.9010851691136 9.6754331471222 10.5499564448270 10.0830012687718 9.30665018498328 10.5069081334794 10.9328130974253 10.0687319149123 9.66134204015534 0.0974441414793399 0.0944824604850746 0.0924954226399683 0.0950721434808049 0.094719863711893 0.0971474583422992 0.0946707104518027 0.0935592263232638 0.103168880029999 0.098357972321291 0.0909807042411075 0.0922732500300365 0.0922207694028005 0.0946503610040165 0.100242903957565 0.093240374129307 0.0906232353685403 0.0913076329812617 0.0965340194224414 5 5 - 313446 313972 313671.818 313190 314997 - gene protein_coding_gene TRUE TRUE AT5G01820.1 ATSR1 (SERINE/THREONINE PROTEIN KINASE 1); kinase Encodes a CBL-interacting serine/threonine protein kinase. similar to CIPK11 (SNF1-RELATED PROTEIN KINASE 3.22, SOS3-INTERACTING PROTEIN 4), kinase [Arabidopsis thaliana] (TAIR:AT2G30360.1); similar to CBL-interacting protein kinase 21 [Populus trichocarpa] (GB:ABJ91227.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.00673457001326438 0.0725380764990099 0.943526688487807 1 0.04772954955347 20.2638997393234 0.00673457001326438 0.078416143583388 AT5G43220_at 0.92118704620772 1.12389034061453 0.754243626110793 1.31054808222597 1.07390475745751 0.822034405384099 0.79713179841392 0.8167593435083 1.28562610806781 1.29989608533497 1.39518350213721 1.24732195110908 1.20597770638962 0.9637698789724 1.16425308107860 1.18668343315787 1.22299123324501 1.38749025722191 0.841666239916908 0.203661234592619 0.201236993462223 0.199161457170213 0.206197963561779 0.199161457170213 0.200242003788708 0.199161457170213 0.203225332846535 0.223696543747323 0.209658788921421 0.204800965627346 0.199161457170213 0.204597375896626 0.202477998237663 0.205590011371193 0.208221444572664 0.205065632689618 0.202894651160871 0.207649609636333 5 5 + 17366435 17366990 17366713.455 17366353 17367027 + gene protein_coding_gene TRUE TRUE AT5G43220.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01810.2); similar to unnamed protein product; gb|AAF03435.1 gene_id:MNL12.4 similar to unknown protein, putative [Medicago truncatula] (GB:ABE81106.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB; (InterPro:IPR008973) 0.0075115299547179 0.071663600753997 0.94420621495164 1 0.0476654245317185 2.13451493741728 0.0075115299547179 0.111400327562605 AT5G05820_at 4.79805778352618 4.94817323347323 4.99631246658233 5.06741666004985 5.44430772880523 5.24524263448668 5.08179049272844 5.08310059811034 4.85166522415116 4.54696467260726 6.52197429553151 7.02087748737382 6.33685607684116 6.22502838945749 7.17846753266984 6.2012971762513 5.55619277346332 6.14507726694512 4.6064012351592 0.228062657913310 0.231395354329932 0.236818851731751 0.227100413909064 0.227100413909064 0.237593159623383 0.232910816428293 0.236934964810748 0.242319040077455 0.234257556746572 0.229420587086887 0.231088410808723 0.237034040014173 0.229331201841765 0.23575042346529 0.227100413909064 0.246730314462127 0.232937249880600 0.227100413909064 5 5 - 1752145 1753482 1752690.818 1751689 1754179 - gene protein_coding_gene TRUE TRUE AT5G05820.1 phosphate translocator-related similar to organic anion transporter [Arabidopsis thaliana] (TAIR:AT3G11320.1); similar to plastidic phosphate translocator-like protein2 [Mesembryanthemum crystallinum] (GB:BAD91177.1); contains InterPro domain Protein of unknown function DUF250; (InterPro:IPR004853) 0.00596239117314634 0.0709807207889685 0.944736891033376 1 0.0476158894126171 10.6163327424482 0.00596239117314634 0.0448672652377387 AT5G13380_at 0.908213092323815 0.442472322466067 0.999348371562761 0.855629851455385 0.817717478411967 0.549240718415031 1.12549786698308 0.0522099189251265 0.932278740292329 0.931039852575042 0.952075926199215 0.815480181010232 1.09505077529127 0.966885697628716 0.87653490055515 0.735713917023127 0.848311242282516 0.771627831715323 1.02511540916859 0.198437921646426 0.197235653778977 0.204123718256047 0.197235653778977 0.197434296279681 0.200784080591888 0.197235653778977 0.198603259350275 0.21216244087101 0.206193451791386 0.197235653778977 0.198114624776144 0.197235653778977 0.201742160748719 0.197235653778977 0.206081219813379 0.210950703424485 0.205717951953449 0.200552760969754 5 5 + 4291799 4292334 4292066.636 4289842 4292444 + gene protein_coding_gene TRUE TRUE AT5G13380.1 auxin-responsive GH3 family protein similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13370.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13350.1); similar to auxin-responsive GH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13360.2); similar to auxin and ethylene responsive GH3-like protein [Capsicum chinense] (GB:AAS02074.1); contains InterPro domain GH3 auxin-responsive promoter; (InterPro:IPR004993) -0.0105520397731342 -0.0698175021673381 0.945640910011028 1 0.0475326021464943 1.64155189905550 -0.0105520397731342 0.209217024234208 AT5G65560_at 3.15122275075724 3.74698289232225 3.81891320685192 4.48637150553643 4.21639545769534 4.06844362138063 3.25632788161088 3.22635976069758 3.146102346614 3.09281796810119 3.5391276262847 3.75565570837085 3.42736281712551 3.40257397748641 3.49182048852352 4.09258839741644 3.78164241706267 3.68362013463168 3.40422198578313 0.204873827656708 0.200674798386408 0.196319100330402 0.191537832810970 0.203524069963231 0.204453403879180 0.200241218377252 0.191664208522116 0.19626849064196 0.188354746311988 0.194615721140917 0.201124511029998 0.201174915279920 0.195106257630677 0.188354746311988 0.189385592979236 0.194880756082104 0.195312147278609 0.206405807410031 5 5 - 26218247 26218785 26218500.545 26218238 26221004 - gene protein_coding_gene TRUE TRUE AT5G65560.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07290.1); similar to Os06g0690900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058418.1); similar to putative fertility restorer homologue [Oryza sativa (japonica cultivar-group)] (GB:BAD30981.1); similar to Os02g0582300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047252.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.00872169884376295 -0.0697956870119266 0.945657864873607 1 0.0475310532995313 7.17696699095428 -0.00872169884376295 0.157014906490745 AT5G61440_at 2.04024172969642 2.14610688301442 2.12364084377399 2.06268837241026 2.14894092542184 2.00361323141028 1.70809203302267 1.82081159453385 2.33556609655611 1.86291932134398 1.99218497585414 2.60100124451086 2.26042252157559 2.45970816619243 2.42544150443546 2.06216753262738 1.68843043593277 2.04624654327777 1.75039164632728 0.225587676367993 0.223347050699905 0.226982031245449 0.227653716804318 0.224002447259806 0.231687994195667 0.227251184104126 0.232530913214570 0.235622957606425 0.229231399508625 0.226342952802614 0.227556195960804 0.226392921849604 0.235922257910618 0.225824084567207 0.224725165310503 0.223099400458503 0.242970189299157 0.222169331238984 5 0|5 /|+ 24725258 24725805 24725574.75 24724726 24726119 + gene protein_coding_gene TRUE TRUE AT5G61440.1 thioredoxin family protein Identical to Thioredoxin-like 3, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9XFI1); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT1G08570.1); similar to thioredoxin 2 [Plantago major] (GB:CAH59451.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain 2; (InterPro:IPR006663); contains InterPro domain Thioredoxin domain; (InterPro:IPR013766); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.00576867135832204 0.0697153658794489 0.945720291156959 1 0.0475253547739495 4.09422164514043 0.00576867135832204 0.0382088366276832 AT5G02390_at 0.993757402034234 1.37552907333795 1.39052583518122 1.11424912870705 1.12720043740576 0.858864502262162 1.03505934717166 1.11497150251295 0.898541168934006 1.23569794006578 1.20412307169412 1.42774399892188 1.10196878977896 1.44535115669886 0.991707592038806 1.45839429727792 1.32918753947011 1.29542221172183 1.19353065980744 0.185150829518185 0.181661718071557 0.187462682895874 0.187261064971991 0.186569219041396 0.191059606941888 0.187242671732364 0.183790200881428 0.198540011655578 0.186319920365615 0.182468858696494 0.189818534870222 0.191258678790379 0.189134990216983 0.181661718071557 0.185196507264685 0.188383083689681 0.187687127721018 0.189412241810390 5 5 - 508788 509292 509097.727 508762 511708 - gene protein_coding_gene TRUE TRUE AT5G02390.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G07620.1); similar to Os01g0149900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042029.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE91371.1); similar to Os12g0570500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067080.1) 0.00677304077985885 0.0687812630149934 0.94644631200542 1 0.0474595645968314 2.32176661447798 0.00677304077985885 0.0948599347588985 AT5G40280_at 5.77384152328342 5.442130244237 6.66315576943066 6.53251700498064 7.00834478950102 6.53101850976447 4.8205878710162 5.09120309132914 5.41567449574488 5.33606559902887 5.87741882147143 6.20657496934262 5.66265718824262 6.02119939756617 5.35960166023377 6.28338494354716 5.56310329645847 6.22715735506715 5.04562689241855 0.217223481234821 0.213549515895522 0.212938970232083 0.221821049187808 0.209602433035435 0.228280836030919 0.213764742782027 0.211043982322777 0.226477502178461 0.215673495276766 0.209602433035435 0.217895819019308 0.218485464486227 0.220635202851852 0.211056901981652 0.213868150129457 0.225763504768058 0.212154824057094 0.209602433035435 5 0|5 /|+ 16121597 16121933 16121815.111 16118619 16122189 + gene protein_coding_gene TRUE TRUE AT5G40280.1 ERA1 (ENHANCED RESPONSE TO ABA 1); protein farnesyltransferase encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought. Identical to Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) (Enhanced response to abscisic acid 1) (FTB) [Arabidopsis Thaliana] (GB:Q38920;GB:Q38916;GB:Q9LLE9); similar to geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative [Arabidopsis thaliana] (TAIR:AT5G12210.2); similar to protein farnesyl transferase beta subunit (GB:AAA87585.1); similar to beta subunit of protein farnesyl transferase (GB:AAA86658.1); contains InterPro domain Prenyltransferase/squalene oxidase; (InterPro:IPR001330); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; (InterPro:IPR008930) 0.00726010445674752 0.0687781062590139 0.946448765645086 1 0.0474593437652478 11.5658129503038 0.00726010445674752 0.113238043122038 AT5G22540_at 3.31074881412427 3.49460969266706 4.96160847183965 4.43238960988557 3.33134494124635 3.58954558947016 2.12915071116951 2.42260778564523 3.32469043221257 2.4995796684944 2.75915191256374 2.41866365084557 2.28046881566448 2.60877404878665 2.90297466789891 2.64919168970333 2.52094489006109 2.80358674256293 2.89168375660644 0.244754524404055 0.246501870880953 0.273360660750062 0.252381700950185 0.253903696392697 0.251294372137651 0.256138958039647 0.255053560187166 0.245516854258317 0.246545602163131 0.251593301216277 0.244754524404055 0.244754524404055 0.24848915512244 0.244754524404055 0.245507666486621 0.244754524404055 0.246255118011712 0.256583194918226 5 5 - 7481563 7482087 7481820.909 7481481 7482956 - gene protein_coding_gene TRUE TRUE AT5G22540.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22550.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD45208.1); contains InterPro domain Protein of unknown function DUF247, plant; (InterPro:IPR004158) 0.00731036715557687 0.0679385214558494 0.947101367126062 1 0.0474009699021202 6.2206444543553 0.00731036715557687 0.118218257299284 AT5G65930_at 4.98151025544116 5.46931905982848 5.99854384946131 5.50019320884251 7.14915173412635 6.36271931574731 6.281125558897 4.8526046879823 5.57260023543823 4.69844349378653 6.29777648169734 6.96542022194794 5.89628064298077 6.05542280368608 6.24524747276542 6.24743698248489 6.05581977001985 6.49019767346555 5.16951326811772 0.241354929977329 0.239159628148099 0.247130889108378 0.254549232370268 0.238490204847826 0.249260927032519 0.253992139112357 0.242228285529595 0.245950851567799 0.248675391895943 0.245156095975560 0.251583377617859 0.243711585042212 0.2559470606613 0.255043924692635 0.241443164706928 0.250728677026751 0.249514450052248 0.240211211648981 5 5|0 -|/ 26387719 26388563 26388132.111 26387427 26393746 - gene protein_coding_gene TRUE TRUE AT5G65930.1|AT5G65930.2 ZWI (ZWICHEL); calmodulin binding / microtubule motor encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT2G22610.1); similar to kinesin heavy chain-like protein (GB:AAB37756.1); similar to calmodulin-binding protein (GB:AAC37475.1); similar to kinesin-like calmodulin binding protein [Gossypium hirsutum] (GB:AAP41107.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Band 4.1; (InterPro:IPR000299); contains InterPro domain Unconventional myosin/plant kinesin-like protein/non-motor protein conserved region MyTH4; (InterPro:IPR000857); contains InterPro domain FERM; (InterPro:IPR009065) -0.0138666347135600 -0.067737724615402 0.947257450701506 1 0.0473871152271682 11.5386722530800 -0.0138666347135600 0.306920075213556 AT5G35160_at 7.06865687653261 7.20344643106131 7.73301512346773 7.78252501332286 8.37153588677076 8.09844939434869 7.36690155228368 7.88390252144572 7.24139464473066 6.87555721978996 8.58860696732837 8.72572126268348 8.3485682581578 8.30244325011854 7.91016876333397 8.17264777918689 8.41443994550575 8.13878302941226 6.99290604679781 0.22023071133918 0.199942039183086 0.205479345007536 0.205133346972193 0.199303723051211 0.217968584078972 0.216172489203448 0.209492812121027 0.229076419759857 0.210113199066037 0.214561830086704 0.199303723051211 0.207900589148111 0.201094906097911 0.209331431555361 0.199303723051211 0.21181650485256 0.211691346119138 0.206138329407840 5 5 + 13433638 13434112 13433916.636 13432184 13434435 + gene protein_coding_gene TRUE TRUE AT5G35160.1 endomembrane protein 70, putative similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT4G12650.1); similar to endosomal protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD01346.1); similar to Os02g0722300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047965.1); similar to Os02g0797700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048399.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) -0.00689684894611386 -0.0676327457794576 0.947339053866985 1 0.0473798881573827 15.3694499552735 -0.00689684894611386 0.104190648174117 AT5G07040_at 1.19575411667195 1.36896188243179 1.41180445511738 1.88683470489392 1.04682483622728 1.25681094963193 1.47757981632213 1.17366851184457 1.78959979258159 1.14969750658186 1.65311670714514 1.72851467785360 0.997454903492417 1.29433351656853 1.63325786672636 1.58387411511286 1.49277198836282 1.75702058995580 1.36681397906025 0.198434704373363 0.195672749032867 0.200358510343090 0.194473403207162 0.197374809036713 0.193988361845889 0.202063959706937 0.198721155998991 0.195635360152505 0.206945743079414 0.196588931277773 0.191921660873714 0.192501329372682 0.196494535780875 0.193504866482281 0.197556526339059 0.201765300222577 0.191840646607141 0.197888572872261 5 5 + 2190391 2190799 2190579.727 2190345 2190824 + gene protein_coding_gene TRUE TRUE AT5G07040.1 zinc finger (C3HC4-type RING finger) family protein Identical to Putative RING-H2 finger protein ATL5E (ATL5E) [Arabidopsis Thaliana] (GB:Q9FL42); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G46160.1); similar to Kelch motif family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA95749.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.00697276567138841 -0.0673004771132772 0.947597340338083 1 0.0473570875647316 2.82873664500600 -0.00697276567138841 0.108364685531906 AT5G51710_at 4.84235110109258 5.09797971355678 5.83930404014207 5.83723954076081 5.40050819196951 5.39996167137693 4.7712379908743 4.77596349429327 4.00715875464517 3.37518480076786 4.81758754193876 4.92316136658421 4.49771869233972 4.45955122421713 4.56046638046797 4.66962462648879 5.16163413935797 5.28988101839667 3.86820123969303 0.239227289574362 0.240201307778594 0.255843752396104 0.243270480546316 0.241141188324059 0.251170363154809 0.243487845888302 0.242018525568602 0.252174959927071 0.238730852431701 0.250048743661517 0.241951396151205 0.243163948274239 0.257589002214638 0.242127161325372 0.244158974645625 0.249814230406043 0.246624073596418 0.244000197412143 5 5|0 -|/ 21021984 21023105 21022440.444 21021504 21025944 - gene protein_coding_gene TRUE TRUE AT5G51710.1 KEA5 (K+ efflux antiporter 5); potassium:hydrogen antiporter member of Putative potassium proton antiporter family similar to KEA6 (K+ efflux antiporter 6), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G11800.1); similar to ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G19600.1); similar to Os06g0561200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057872.1); similar to Putative potassium/proton antiporter-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19118.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) 0.00558865347179438 0.0666302320891601 0.948118369307518 1 0.0473114361147327 9.51938557905458 0.00558865347179438 0.044246825023131 AT5G43200_at 0.764877322446736 1.16766140036230 0.925046476832543 0.907438256118317 0.758921816312482 1.46426644259183 0.995273046587524 0.911064534988321 1.35765940478377 1.25809179012191 0.933042436898914 1.26358701679176 1.45198662048774 1.24323037302479 1.21866746752060 1.11955857960243 1.38469775234886 1.03153597255920 0.787222934109115 0.166487279671957 0.168666140509915 0.167027401389928 0.166028346028235 0.166456491662078 0.170439846805787 0.178955926777427 0.168997190032751 0.169238689214107 0.172852506224772 0.168700343199478 0.173679241607899 0.177350067431796 0.178511280386156 0.167452759637643 0.168162328976576 0.167969355067898 0.171160392376388 0.171932689270004 5 5 - 17363406 17363936 17363579.818 17363369 17363992 - gene protein_coding_gene TRUE TRUE AT5G43200.1 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G28620.1); similar to C3HC4 type (RING finger) Zinc finger containing protein [Brassica oleracea] (GB:ABD65029.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.00772270417428253 -0.0656256614455882 0.948899340873512 1 0.0472438680913945 2.15687515556795 -0.00772270417428253 0.141349453816836 AT5G54410_at 0.628811727924789 1.08951511897939 1.4105408276574 0.704719957594502 0.374045030981847 0.992558628745361 0.763508633203289 1.01344370398240 0.744070398398928 0.590923850331557 1.17772167211394 0.597645683441177 0.558593486348885 0.475292090069173 0.648402712380396 0.933166997626241 1.22331249854 0.87140371435375 0.693551547206007 0.197373649093913 0.197408876916593 0.202913710142412 0.203349273222332 0.200087675457148 0.199352802361706 0.207194303010314 0.201044116273089 0.212505534173275 0.197780016538361 0.201271028284334 0.202437552641295 0.201727538869654 0.197161538839119 0.207476794546352 0.201939220260714 0.203279393821374 0.200958095841507 0.202344868034331 5 5 - 22111473 22112035 22111692.273 22111473 22112132 - gene protein_coding_gene TRUE TRUE AT5G54410.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56660.1); similar to hypothetical protein PFL0315c [Plasmodium falciparum 3D7] (GB:NP_701428.1); similar to hypothetical protein DDBDRAFT_0189774 [Dictyostelium discoideum AX4] (GB:XP_647549.1); similar to T05D4.5 [Caenorhabditis elegans] (GB:NP_499807.1) 0.00891524345174578 0.0640464133466555 0.950127190744473 1 0.0471397203314169 1.61558009805263 0.00891524345174578 0.186020266885220 AT5G62230_at 1.78650115545368 2.09954262514853 2.26155251285239 2.56335946883943 2.07884253085200 2.11285308731643 1.86093925657599 1.74799077019753 2.2308866959618 2.44362883441689 2.00074233546883 2.31001439954778 2.51681392499373 2.28272987283761 2.22300142546423 1.83602608494338 1.98328819752487 2.62615459084962 1.93336102369241 0.212796497326913 0.213037123808136 0.220603548341163 0.215543911761059 0.222051531255902 0.218277718342011 0.212796497326913 0.227482285679620 0.239369536265519 0.212796497326913 0.217381304334202 0.219534106849273 0.212796497326913 0.215889844211005 0.216536486353436 0.218723118791882 0.228346149847683 0.219608131658015 0.214832898811785 5 5 + 25018765 25019246 25019022.727 25013460 25019566 + gene protein_coding_gene TRUE TRUE AT5G62230.1 ERL1 (ERECTA-LIKE 1); kinase Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. similar to ER (ERECTA, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1) [Arabidopsis thaliana] (TAIR:AT2G26330.1); similar to ERL2 (ERECTA-LIKE 2), kinase [Arabidopsis thaliana] (TAIR:AT5G07180.1); similar to receptor-like protein kinase [Elaeis guineensis] (GB:AAO26312.1); similar to putative receptor protein kinase [Sorghum bicolor] (GB:AAL68842.1); similar to putative transmembrane protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD44800.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype; (InterPro:IPR003591); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Leucine-rich repeat, plant specific; (InterPro:IPR007090); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Leucine rich repeat, N-terminal; (InterPro:IPR013210) 0.00592607330985295 0.0639276396201708 0.950219541684793 1 0.0471319899620033 4.27643361189323 0.00592607330985295 0.0779700047161293 AT5G39500_at 4.74682738849162 4.76391942243268 4.81095028195887 5.30341863685261 5.86472490002274 5.65360911839493 4.8044766129309 5.19840877981784 5.320438893599 4.52627834436179 6.45085943686623 6.97383515576823 6.39824928179947 6.2430733103421 6.42047975813959 6.13635612509095 6.51039069676129 6.01875300621949 5.11236076340744 0.251694748313172 0.240183963683672 0.248842886495049 0.242828428394594 0.233549883153 0.243480424853942 0.254305533819000 0.243491768225556 0.254083608386566 0.255431635811775 0.238401005205072 0.24047953157389 0.238305732257171 0.247529380109869 0.243464194900493 0.23566728837942 0.242249499374695 0.234678991218613 0.258542203439239 5 5 + 15836595 15837092 15836806.545 15832502 15837273 + gene protein_coding_gene TRUE TRUE AT5G39500.1 pattern formation protein, putative similar to GN (GNOM) [Arabidopsis thaliana] (TAIR:AT1G13980.1); similar to sec7 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19610.1); similar to putative pattern formation protein GNOM [Oryza sativa (japonica cultivar-group)] (GB:BAD15695.1); similar to H0207B04.10 [Oryza sativa (indica cultivar-group)] (GB:CAH65909.1); similar to GNOM gene product (GB:AAA91150.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) -0.0067646469072522 -0.0636207560317156 0.950458158509143 1 0.0471120828711515 10.8334713576942 -0.0067646469072522 0.115126186440913 AT5G57260_at 1.70539857366409 1.63285565677711 2.03773806619673 1.85569996438417 1.60483659963253 1.87063934857525 1.33964723270429 1.68458110653164 1.73885739472988 1.71870015194498 1.91134409953110 1.63327321987495 1.92791763765552 1.51592021968838 1.83133450246264 1.77067366120887 2.05263443383412 1.65601252794554 1.82831600020015 0.211720118908089 0.210697656701802 0.206173604289994 0.209446898777625 0.212045121388135 0.210500059092464 0.211484902231518 0.211721403435817 0.210796289392573 0.214009092640688 0.210064306254380 0.210294611110902 0.206173604289994 0.209694170845668 0.206173604289994 0.215678362848908 0.206173604289994 0.227298338814086 0.209595186568046 5 5 - 23215935 23216475 23216206.455 23215863 23217544 - gene protein_coding_gene TRUE TRUE AT5G57260.1 CYP71B10 (cytochrome P450, family 71, subfamily B, polypeptide 10); oxygen binding putative cytochrome P450 Identical to Cytochrome P450 71B10 (EC 1.14.-.-) (CYP71B10) [Arabidopsis Thaliana] (GB:Q9LVD2); similar to CYP71B36 (cytochrome P450, family 71, subfamily B, polypeptide 36), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26320.1); similar to CYP71B34 (cytochrome P450, family 71, subfamily B, polypeptide 34), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26300.1); similar to CYP71B37 (cytochrome P450, family 71, subfamily B, polypeptide 37), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26330.1); similar to cytochrome P450 [Citrus sinensis] (GB:AAL24049.1); contains InterPro domain E-class P450, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) 0.00598796015428649 0.063555632054629 0.950508796205762 1 0.0471078706847948 3.49109788692496 0.00598796015428649 0.0826380548743518 AT5G08750_at 5.81022685786121 6.6428231910694 7.91264962228493 7.9447574492688 8.5354907825501 7.94428257256557 7.59859239151874 7.66976581412921 7.11395287448892 7.53100679004951 8.34326055029202 7.98008985890623 8.38159240298288 8.11883218969191 7.34146957551514 8.2892407712264 7.59392917911348 8.32733637856524 7.18068232725541 0.218385765790237 0.202597518981926 0.218131338365208 0.199583454443347 0.197172156807069 0.213613034183591 0.198182347558135 0.193956413268740 0.220749822786935 0.199431401626094 0.193956413268740 0.195256446054902 0.193956413268740 0.207017495279953 0.20769264961643 0.193956413268740 0.236334677741960 0.206723934920497 0.203357979319856 5 5|0 +|/ 2853653 2854295 2853922.5 2851980 2854514 + gene protein_coding_gene TRUE TRUE AT5G08750.1|AT5G08750.2|AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G63780.1); similar to zinc finger protein [Brassica rapa] (GB:ABK56014.1); similar to OSJNBb0020J19.13 [Oryza sativa (japonica cultivar-group)] (GB:CAE05784.2); similar to Os04g0692300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054367.1); contains InterPro domain RINGv; (InterPro:IPR011016); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) -0.0084909050687938 -0.0629915861668729 0.950947384403079 1 0.0470715688174823 15.1684150154316 -0.0084909050687938 0.177230313449249 AT5G10560_at 9.12502875314482 9.4048751344777 9.21841451326242 9.41690796401684 9.80844667958844 9.65836074279514 8.75704286454457 8.53157892848045 8.7188865930615 8.48631152574537 9.89515404959548 9.90563187731 9.1668884420739 9.6388270133013 9.54736759340333 9.40940294824786 9.27751576007174 9.50143985355747 8.57269003394103 0.135203975740550 0.131613595021245 0.131613595021245 0.133793531891092 0.131613595021245 0.137342726821356 0.132642094486212 0.141160975023848 0.156567516025979 0.153964343193478 0.133730980896276 0.136025457585683 0.146014587032166 0.141250708272166 0.143814410937165 0.131613595021245 0.146059489937186 0.146805984584085 0.1473105019504 5 5 - 3336345 3336899 3336626.455 3336256 3339367 - gene protein_coding_gene TRUE TRUE AT5G10560.1 glycosyl hydrolase family 3 protein similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT1G78060.1); similar to Glycosyl hydrolase family 3 C terminal domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX96800.1); similar to beta-D-xylosidase [Oryza sativa (japonica cultivar-group)] (GB:AAX92971.1); similar to beta-D-xylosidase [Hordeum vulgare] (GB:AAK38482.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (InterPro:IPR002772); contains InterPro domain Glycoside hydrolase, family 3, N-terminal; (InterPro:IPR001764) 0.00572093870963908 0.0622052576078771 0.951558842552764 1 0.0470215004900795 18.307785860761 0.00572093870963908 0.0756455611391319 AT5G26190_at 0.948794779760126 1.65069508298541 1.84971063186577 1.99498448091128 0.985333533822562 1.36212148446856 1.31619648040349 1.68618278921790 1.70758748040185 2.01234843586729 2.01810740078243 2.00365294931793 1.83340741141595 1.82262723172013 1.94774637639702 2.11107444316952 1.83434172929864 2.30093610032464 1.87071606389611 0.25338200334729 0.257554130869691 0.258667492076675 0.258896899551469 0.258105224839454 0.257627218707833 0.262467091094719 0.253478388433193 0.269395043681467 0.253331248525893 0.254540140648552 0.260073329587351 0.253639823303499 0.259569771323128 0.250013364880430 0.251752642236816 0.264179110698705 0.2597387297221 0.260420555415941 5 5 - 9153654 9154171 9153908.545 9153631 9155301 - gene protein_coding_gene TRUE TRUE AT5G26190.1 DC1 domain-containing protein similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G43030.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like; (InterPro:IPR011424); contains InterPro domain DC1; (InterPro:IPR004146) 0.00754279849074835 0.0610422407678966 0.952463277724371 1 0.0469485992226373 3.39802109060857 0.00754279849074835 0.154069932093243 AT5G06590_at 2.57883111851507 2.77256272375104 3.2349921081521 3.22631832155725 2.55709372887061 2.65131254321552 3.24642832822363 2.65262344799245 2.73266440161250 2.88094574866806 3.11888911619362 4.16407942496424 3.66725579048476 3.2190719602827 3.7829646207857 3.31496176446457 2.68964457630344 3.30829002607986 2.44666991521667 0.291665867608925 0.301902509683874 0.297006708648816 0.301417133332925 0.282327194696927 0.303794151297959 0.297003681764061 0.285270964521545 0.311639935199313 0.309476849385187 0.282327194696927 0.282327194696927 0.292669102964017 0.290364106513234 0.282327194696927 0.283937413815649 0.309652591180747 0.282327194696927 0.325689565036376 5 5|0 +|/ 2017540 2018661 2018244.4 2016646 2018836 + gene protein_coding_gene TRUE TRUE AT5G06590.1 similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99420.1) -0.00601649091958867 -0.0578580931272634 0.954939827080453 1 0.0467560424960824 5.91247263092334 -0.00601649091958867 0.109324616816391 AT5G45630_at 2.12664560526192 1.68943801597863 2.12725854185730 2.07756938591380 1.45764216596827 2.02640698887422 1.40826684559146 1.7134989670479 2.34157514182482 1.61041752699031 1.83920563104791 2.11108004867930 2.34705502882197 1.98277230570931 2.03075213967291 2.0736176954672 1.67021709595595 2.15106400495557 1.73168768197269 0.180476660056496 0.180023230717559 0.171499746050523 0.181665573468874 0.185835359297023 0.173791021641194 0.173585214847989 0.173893343352508 0.177513034000853 0.17663980355596 0.176540395777588 0.171499746050523 0.177006026759115 0.174342430287150 0.183246439599068 0.173484318043673 0.175492016348324 0.186383969137285 0.176006013220056 5 5 - 18523145 18523443 18523295 18523036 18523550 - gene protein_coding_gene TRUE TRUE AT5G45630.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18980.1); similar to hypothetical protein MBP_91N22.56 [Musa balbisiana] (GB:ABF70130.1); contains InterPro domain Protein of unknown function DUF584; (InterPro:IPR007608) 0.0065879527227401 0.0573314103972278 0.955349516417459 1 0.0467251854709974 3.78848111992071 0.0065879527227401 0.135190981241076 AT5G46910_at 2.43060826097763 2.56478560836363 3.38490871469205 3.71299758891919 2.84119748414407 2.57392294492858 2.6552375022671 3.29466430588306 3.71825595767793 3.58148484413808 4.4968240617003 5.36145530009703 4.20330474955405 4.88697191097822 4.53586701042669 4.39872956592404 3.12353023491306 3.87538021358295 3.43997794352507 0.237109180807046 0.246172055994185 0.238765812441357 0.239227883036757 0.234793306394699 0.240789893506735 0.242383603352685 0.239165428012411 0.233187677219398 0.235423513005681 0.233187677219398 0.240791008857854 0.238971741698216 0.235585609675308 0.236648207171299 0.236906814997365 0.244656050608372 0.241655080019944 0.240595112801151 5 5|0 +|/ 19067337 19068046 19067571.111 19065007 19068107 + gene protein_coding_gene TRUE TRUE AT5G46910.1 transcription factor jumonji (jmj) family protein similar to REF6 (RELATIVE OF EARLY FLOWERING 6), transcription factor [Arabidopsis thaliana] (TAIR:AT3G48430.1); similar to transcription factor jumonji, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB48025.1); similar to Os10g0577600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065492.1); similar to putative retinoblastoma binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAL58187.1); contains InterPro domain Transcription factor jumonji; (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase; (InterPro:IPR003347); contains InterPro domain Transcription factor jumonji, JmjN; (InterPro:IPR003349) 0.0064842005161555 0.05653358490901 0.955970144614474 1 0.0466789799857735 6.90237236594395 0.0064842005161555 0.134710377446505 AT5G54700_at 1.50674902728725 1.16873820538316 1.76292276797059 1.48718912535049 1.50274972220244 1.58667856811862 1.65325160343252 1.10769123217863 2.05781322595014 1.46615951861487 1.67894183520009 1.62022445732338 1.71603314257145 1.60581668378211 1.41268302410873 1.32864687861683 1.81758913570842 1.88812489221778 1.35721604515737 0.217618212545478 0.216577596730303 0.221041972137437 0.218857577261801 0.225303522082081 0.219553543120088 0.227250897518121 0.219392265236765 0.219971758378247 0.232278593743859 0.223352310218037 0.218502720722963 0.222703558220221 0.221456926185629 0.233154234144038 0.218185229817412 0.219274909316761 0.218421442894881 0.217471292444434 5 5|0 -|/ 22240381 22241341 22241006.4 22240322 22242735 - gene protein_coding_gene TRUE TRUE AT5G54700.1 ankyrin repeat family protein similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT5G54710.1); similar to Ankyrin [Medicago truncatula] (GB:ABE80931.1); contains InterPro domain Ankyrin; (InterPro:IPR002110) 0.00614635426923887 0.0563465683011345 0.956115629222436 1 0.0466682426726036 3.10228149953974 0.00614635426923887 0.121749893731215 AT5G02800_at 7.64676662932403 7.70014481464957 8.42166967696332 8.3121571082725 9.08988606335005 8.8666268501311 7.76100908378093 7.97029930625242 7.61591860518088 7.24881165561626 8.52984027973582 8.0562336384849 8.33675688661186 8.44213066009733 7.908890327015 8.42442292052255 7.93096587840662 8.19611717266291 7.05065838804127 0.16608714068436 0.156904952611523 0.153415586978271 0.154700286323071 0.156530077714363 0.151254720339449 0.16254006257386 0.160003652270926 0.160210729335517 0.163916710504425 0.151254720339449 0.151254720339449 0.157011865116884 0.153997319193235 0.160421791425497 0.156658451261885 0.180267165832768 0.153992526757672 0.156496796011845 5 5|0 -|/ 635552 636110 635811.9 635226 637501 - gene protein_coding_gene TRUE TRUE AT5G02800.1 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G18610.1); similar to protein serine/threonine kinase BNK1 [Brassica napus] (GB:AAG16628.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) -0.00485844497572607 -0.0560136695198454 0.956374603143499 1 0.0466492177019981 15.9877195766180 -0.00485844497572607 0.0570002519436836 AT5G16640_at 1.97370395461877 1.82691843751467 2.22299738478907 2.06901057049145 2.25796135226328 2.40732500225702 2.08705324348353 2.13896026993855 2.30686498982855 2.04311741092056 2.17430966181919 2.43578806925430 2.35762701250302 2.28848626990443 2.29221986814660 2.22123378279832 2.48415078545057 2.39010183514780 2.14380580983011 0.164518494722130 0.165238612885592 0.164044185768275 0.165740401302389 0.166026060300250 0.166276132313846 0.166724983551868 0.161089931765886 0.163509512879935 0.164157019541675 0.161089931765886 0.165741221750933 0.166632907376553 0.161089931765886 0.163327107247084 0.162032534212321 0.163232961461479 0.161594769984481 0.163020590760219 5 5 + 5461991 5462472 5462255.455 5460979 5463020 + gene protein_coding_gene TRUE TRUE AT5G16640.1 pentatricopeptide (PPR) repeat-containing protein similar to binding [Arabidopsis thaliana] (TAIR:AT1G62680.1); similar to fertility restorer homologue C [Raphanus sativus] (GB:CAD80164.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) -0.00465509217559579 -0.0552828825686356 0.956943127053414 1 0.0466078487764627 4.37053414233009 -0.00465509217559579 0.0458714892206459 AT5G44910_at 2.74645065906661 3.34498737069009 1.92276743012795 2.03703239236361 2.99180654152093 3.32307863913507 1.46981063309815 1.77516975611039 2.23725284676946 2.02238948058807 1.97843486552558 2.52061932172624 1.95451395879986 2.45581454319296 1.94499129517752 2.19271111589226 2.05744916601124 1.67200958031126 1.42428811203075 0.192937831389042 0.195229585683948 0.181730518535708 0.187436890056629 0.179045848786134 0.186264536150564 0.178669412526177 0.185580485639455 0.185404226185522 0.184518648447395 0.184970656091929 0.191425841971837 0.179083104719956 0.178669412526177 0.182981935747595 0.178669412526177 0.189746227647497 0.183042378476068 0.190216026559782 5 5 + 18154763 18155420 18155175.727 18154581 18155462 + gene protein_coding_gene TRUE TRUE AT5G44910.1 Toll-Interleukin-Resistance (TIR) domain-containing protein similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G45000.1); similar to N-like protein [Nicotiana tabacum] (GB:AAT37497.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) 0.00624169751943182 0.0551761653053317 0.957026151056944 1 0.0466018530782265 4.44724365807695 0.00624169751943182 0.131143933772972 AT5G06400_at 1.56147748189141 1.70365263642699 1.31125715974832 1.59258452533883 1.61403422593908 1.81518681473347 1.15468295589375 1.04399480748775 1.50614955532666 1.42650793688724 1.17060014380394 1.90200541183389 1.32628771229777 1.18452040440426 1.30144764084546 1.22653492277981 1.82091158821818 1.71720504772401 1.45166688572903 0.183551685725203 0.183961171209459 0.187040692979650 0.193372641043747 0.183898993926316 0.188923411600114 0.186573600056494 0.185402957017303 0.200770372663271 0.190225808005737 0.184459674950332 0.192982125010879 0.187635534590014 0.185305588024170 0.181885205446663 0.185966494021997 0.190867470078688 0.189446463941545 0.186050359671550 5 5 + 1958612 1959028 1958832 1955960 1959052 + gene protein_coding_gene TRUE TRUE AT5G06400.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G62910.1); similar to Os12g0456100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066728.1); similar to pentatricopeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47632.1); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.00450314870001556 0.0502942540141876 0.96082474080922 1 0.0463399528277378 2.93342411008381 0.00450314870001556 0.067485348540979 AT5G58180_at 0.915158737960491 1.54241298183791 1.84336505771637 1.63424666551294 1.46316872585303 1.31065007550658 1.24909135564454 1.18390130564299 1.38314618621517 1.14030239224451 1.39150319861679 0.876382532716709 0.918776339482295 1.51687829503888 0.999293229575002 1.01740125695041 1.22016388868568 1.38818675210826 1.43722449451327 0.202928281565661 0.201541583414273 0.200070911067486 0.203933036502949 0.198950085786178 0.201297823876132 0.198950085786178 0.208141915481781 0.209331548270706 0.202302840692164 0.198950085786178 0.200091674536743 0.202987401892817 0.203925141456969 0.200174829829083 0.200319320386937 0.203040472876806 0.202900763763964 0.198950085786178 5 5|0 +|/ 23561257 23562359 23561686.6 23561237 23562383 + gene protein_coding_gene TRUE TRUE AT5G58180.1 ATYKT62 member of YKT6 Gene Family Identical to VAMP-like protein YKT62 (AtYKT62) (ATGP1-like protein) (YKT62) [Arabidopsis Thaliana] (GB:Q9LVM9); similar to YKT61 (similar to yeast SNARE YKT6 1) [Arabidopsis thaliana] (TAIR:AT5G58060.1); similar to NTGP1 [Nicotiana tabacum] (GB:AAD00116.1); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908); contains InterPro domain Longin-like; (InterPro:IPR011012) 0.0053509925478479 0.0497771888332047 0.96122712803688 1 0.046313632987066 2.63589813536156 0.0053509925478479 0.117968213873406 AT5G02710_at 7.48148194983643 7.50908520452272 8.4166878486235 8.16903996270299 9.05237674802863 8.44375006129957 7.72194244237612 7.65436895174937 6.47727911349803 6.99992739663915 7.72433578382158 8.13795579510882 7.80543224585963 7.51607871357908 8.45495399902827 7.97475092127294 8.25275177355131 7.10209342427176 7.1580802487142 0.183825913245470 0.181280115003546 0.184703770004846 0.185220093257069 0.202620608186821 0.194205880107951 0.195478081168996 0.179595384892876 0.19646244507243 0.184244618924373 0.192585159065582 0.185838836698553 0.188759613707134 0.186177488930002 0.177659451901230 0.177659451901230 0.197203048619271 0.187983022984261 0.19666389809948 5 5|0 +|/ 612633 613443 613076.556 612568 614497 + gene protein_coding_gene TRUE TRUE AT5G02710.1 similar to Uncharacterised protein family containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF96102.1); similar to Os03g0363400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050164.1); contains InterPro domain Protein of unknown function UPF0153; (InterPro:IPR005358) 0.00526254613693 0.0496301702860308 0.96134154196452 1 0.0463061990321792 15.4308281469818 0.00526254613693 0.114410472735749 AT5G62830_at 0.83847646762963 0.831476251711852 1.10539456529905 1.26470529899786 0.779185618814634 1.04121657862468 0.718149021453041 1.22105764696453 1.25966272872974 1.2650919631825 1.11313763390592 1.70541572531614 1.07710176298028 1.27024229942408 0.899598274789726 1.50379621300318 0.88016120463923 1.83547817666719 1.35424093488559 0.204085252842789 0.201989016067257 0.210468313249021 0.202372834408997 0.202967025550996 0.210671515846075 0.202596596160817 0.203462395767458 0.203340769709719 0.203251209380172 0.202292840644268 0.202496938652762 0.206567952068037 0.204867587216980 0.206726907814102 0.205316012712132 0.206293395332383 0.211218204315985 0.201688456612043 5 5 - 25243443 25243942 25243729.545 25243394 25244008 - gene protein_coding_gene TRUE TRUE AT5G62830.1 F-box family protein-related similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G17560.1); contains InterPro domain Galactose oxidase, central; (InterPro:IPR011043); contains InterPro domain F-box associated type 1; (InterPro:IPR006527) -0.00501255484781357 -0.0495742541425243 0.96138505770451 1 0.0463033774158925 2.26426515799024 -0.00501255484781357 0.101941715855046 AT5G47340_at 0.933052234140716 1.18498290707704 1.51949377400273 1.30905590224293 1.69569773980683 1.20663215798355 1.40998753302048 1.28696918173347 1.61203182416691 1.82252316042042 1.52000379092151 1.66508619731042 1.84583591880440 1.90066502981818 1.48084276552535 1.41512679426343 1.48295419154825 1.75005896817644 1.55986478409959 0.221365389633572 0.22661377735272 0.213847244179053 0.216810260233887 0.219479515465315 0.219451225156422 0.213847244179053 0.213847244179053 0.221658501108379 0.219216597774529 0.226380364871822 0.217116913527943 0.216859347881632 0.224165132108000 0.220179391527949 0.213847244179053 0.216539848356867 0.227916011062947 0.225185941567128 5 5|0 +|/ 19227377 19228287 19227946.778 19226734 19228361 + gene protein_coding_gene TRUE TRUE AT5G47340.1 palmitoyl protein thioesterase family protein similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47330.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) -0.00481744586065735 -0.0472520890702583 0.963192355992854 1 0.0461890049777231 2.96692307705512 -0.00481744586065735 0.104131151391631 AT5G06440_at 4.87514958253981 4.65680181900421 6.20846666414457 5.37853146334363 7.41022316809128 5.76506624754886 5.87857857081718 4.30996975322826 6.12012633516523 6.20333557938358 7.9287314074949 7.66137871833429 7.15320788704847 6.9546979546208 6.58725188871872 7.14693357663469 6.94101207160864 6.00873867356526 6.31221741454192 0.196894966392359 0.195372375041621 0.192885321734461 0.192885321734461 0.204831649666338 0.199102750905646 0.196481909288729 0.200737759445717 0.203649732159887 0.195802117065652 0.203791834012202 0.193550001665096 0.200221335727696 0.201629911062598 0.199405660496558 0.193122114285939 0.200943977702669 0.198152160316099 0.202028482538125 5 5 - 1964642 1965204 1964930.636 1964469 1967330 - gene protein_coding_gene TRUE TRUE AT5G06440.1|AT5G06440.2|AT5G06440.3 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11720.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94317.2); contains domain Bet v1-like (SSF55961)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11720.2); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABA94317.2); contains domain Bet v1-like (SSF55961); contains domain no description (G3D.3.30.530.20) 0.0122603403261674 0.0453365108760038 0.964683379021816 1 0.0460987853574199 12.1901669745648 0.0122603403261674 0.420474513820745 AT5G07000_at 1.46683949541062 1.72288900971337 1.40612669119347 1.26140437029346 1.5716510754225 1.38654232790949 1.76933580906199 1.86802469440124 2.43323782488941 1.92985086428979 3.40609524570417 3.05068465543877 3.06756566394293 2.33780752980968 3.05649744578786 2.40455182653712 1.97987041610441 3.04907045868834 2.11320401859738 0.209562465454470 0.204018363670083 0.207322744402223 0.211165909765308 0.205098300657455 0.207061197366123 0.202333223901248 0.203483263412766 0.210482762046123 0.200660162706734 0.206803591780543 0.208324820070151 0.209645593365601 0.203130066362878 0.19979970563164 0.202802177829058 0.208875972541264 0.210065418202900 0.204373332363439 5 5 - 2171722 2172199 2172036.455 2171404 2172940 - gene protein_coding_gene TRUE TRUE AT5G07000.1 sulfotransferase family protein similar to sulfotransferase family protein [Arabidopsis thaliana] (TAIR:AT5G07010.1); similar to Sulfotransferase [Medicago truncatula] (GB:ABE88692.1); contains InterPro domain Sulfotransferase; (InterPro:IPR000863) -0.00396310544829076 -0.0449524046507746 0.964982371915019 1 0.0460811439174006 4.03299275476436 -0.00396310544829076 0.0625181735457374 AT5G10580_at 1.38822714275083 0.950441394027994 1.70395950379314 1.80514500691475 1.17825051914723 1.22319194033300 1.42366202912041 1.15982567364903 1.27004842095953 1.26343517334766 1.08646895015826 1.50214330410378 1.7377381137228 1.22746721971739 0.967548059476271 1.19870914685982 1.35729334585183 2.01596242890965 1.78155143150537 0.177516209422701 0.178948102294135 0.192274218094032 0.177720265246726 0.181438807270956 0.184773429846237 0.176703432655394 0.175510387962529 0.185872793163086 0.179377306669341 0.182204068913179 0.192855955727264 0.174258082756965 0.174095926042718 0.176047727371285 0.173724508576310 0.178292980908790 0.183948572372189 0.184836013706949 5 5 + 3348149 3348539 3348360.818 3347422 3350072 + gene protein_coding_gene TRUE TRUE AT5G10580.1|AT5G10580.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31330.1); similar to Protein of unknown function DUF599 [Nitrosococcus oceani ATCC 19707] (GB:YP_343436.1); similar to Os09g0494600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063551.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55679.1); contains InterPro domain Protein of unknown function DUF599; (InterPro:IPR006747)|similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31330.1); similar to Os09g0494600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063551.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAC55679.1); similar to Os08g0521000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062272.1); contains InterPro domain Protein of unknown function DUF599; (InterPro:IPR006747) 0.00429703213704424 0.0443400391135847 0.96545905625786 1 0.0460533291352565 2.76659356606913 0.00429703213704424 0.0905067986164136 AT5G11310_at 2.08712342737599 2.21208468347565 2.70619559254931 2.60870156476186 2.32401875656261 2.23213882539041 2.50928060297868 1.98795099434643 1.76280468881871 1.92863050650934 1.80853713103144 1.36088728595698 2.3079418062955 1.91941683721333 2.11803387671685 2.22406858741293 2.24579170671124 1.84941342663302 1.87683789553361 0.174695688422722 0.172330234677268 0.17504617827335 0.176694671172522 0.177913620074697 0.172004271193931 0.173750113306478 0.180082582253827 0.178878924354160 0.172004271193931 0.173697324115129 0.174365242356671 0.181645149111604 0.177290382279815 0.175851339797275 0.172004271193931 0.177338384916485 0.172410478039839 0.175349801724389 5 5 + 3607859 3608306 3608073 3606403 3608614 + gene protein_coding_gene TRUE TRUE AT5G11310.1 pentatricopeptide (PPR) repeat-containing protein similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G71060.1); similar to pentatricopeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF98845.1); similar to Os01g0506100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043148.1); similar to putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] (GB:AAK71569.2); contains InterPro domain Pentatricopeptide repeat; (InterPro:IPR002885); contains InterPro domain Protein prenyltransferase; (InterPro:IPR008940); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) 0.00432675507085856 0.0438142581850837 0.965868351762389 1 0.0460297514726870 4.25111298719693 0.00432675507085856 0.0956268948756224 AT5G15470_at 3.94730785812580 4.75774648340896 5.19893925361176 5.4213221433274 5.40352594396296 5.32226391584279 5.3808805250918 5.41254926113533 4.68497133677347 4.822272041196 6.40271203738396 6.60925466076686 5.80115296901788 6.33969687521376 5.67245958227869 5.84314267891471 5.88101228735192 6.2596549818109 4.46988731328625 0.244267882198812 0.234619845084427 0.240818453038122 0.238249596604994 0.227633150908426 0.234931493005974 0.230721504534736 0.245842190756923 0.233233472808655 0.226271787086556 0.225932296176099 0.22534075376939 0.227725263745813 0.241235872377366 0.241089936748485 0.222835903010994 0.232612934107727 0.230281943317808 0.230744644386983 5 0|5 /|- 5021485 5022045 5021705.5 5021013 5024745 - gene protein_coding_gene TRUE TRUE AT5G15470.1 GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups Encodes a protein with putative galacturonosyltransferase activity. similar to GAUT13 (Galacturonosyltransferase 13), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G01040.1); similar to Os12g0578500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067123.1); similar to Os03g0211800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049351.1); similar to Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF94604.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) -0.00513726729108843 -0.0428445990371506 0.966623212369062 1 0.0459870062729158 10.4856565844855 -0.00513726729108843 0.146215455518098 AT5G23940_at 1.79159842555660 1.67817262421415 1.85086654747400 1.55200569264285 1.77973723263362 1.31172689022969 1.70750322691288 1.52987396200289 1.85073050793026 2.01180054025472 2.23002957668601 2.06442116186545 2.31364248526081 2.23971793838523 2.02973059313930 2.17861622447658 2.16253757288472 2.33330483728260 1.71482918152014 0.179787667730355 0.174718977023544 0.177075074603139 0.179488474069236 0.174718977023544 0.182159429759447 0.178694950268128 0.180135377069734 0.181092353876149 0.196470415960170 0.179341866718850 0.192913875930107 0.183305084478803 0.176430558493706 0.181205696582728 0.175268631226257 0.183689664943708 0.185187557124155 0.189787415340099 5 5 - 8076903 8077193 8077046.091 8076332 8079796 - gene protein_coding_gene TRUE TRUE AT5G23940.1 EMB3009 (EMBRYO DEFECTIVE 3009); transferase similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G42830.1); similar to acyltransferase-like protein [Gossypium hirsutum] (GB:AAL67994.1); contains InterPro domain Transferase; (InterPro:IPR003480) -0.00433782941951222 -0.0427649684653179 0.966685204741078 1 0.0459835384299197 3.67674563786631 -0.00433782941951222 0.102784718663802 AT5G24340_at 2.55827712684653 1.89856865339225 2.43151033689274 2.14165327483145 2.96832702017136 2.41813009104362 2.29524520266836 2.27328279802666 2.52386421090194 2.80925030902344 3.55974599857842 3.02939481209867 2.82811862410881 2.64302780419449 3.47973923032358 2.77210077565596 3.43261365265877 2.75650990688705 2.71733277959845 0.206920566021190 0.194591643088926 0.188778258188528 0.194180797121021 0.191213594523482 0.200656744799870 0.188778258188528 0.188778258188528 0.192871924899124 0.19568503070666 0.197888966469101 0.191343212413931 0.195168792801387 0.197793931698595 0.194417308236357 0.194845026827600 0.188778258188528 0.195061624524149 0.188989174122658 5 5 + 8298616 8300100 8299025 8297308 8300377 + gene protein_coding_gene TRUE TRUE AT5G24340.1 3'-5' exonuclease domain-containing protein similar to 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G56310.1); similar to 3-5 exonuclease [Medicago truncatula] (GB:ABE94381.1); contains InterPro domain 3' (InterPro:IPR002562); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Protein of unknown function DUF82; (InterPro:IPR002782) -0.00522301440666989 -0.0418092801790396 0.967429225635195 1 0.0459424221678492 5.24619370485304 -0.00522301440666989 0.156939819242737 AT5G48100_at 2.00317941082736 1.67145247619769 2.38264364297302 2.29970770204703 1.76771868663181 2.12572644140249 1.75088219070310 1.75675698160929 2.11749768512024 2.05815268653423 2.23932679062509 2.16642505297506 1.76606568447471 2.05688905177133 2.17617972269134 1.93135408518558 2.4387407610972 2.43903286505648 2.23054752724283 0.213088574635307 0.215064189471375 0.216760406860172 0.223519675510863 0.218090077706796 0.217175523193336 0.217055158145333 0.217343061979553 0.22743055676584 0.214432444985757 0.216548032435019 0.213236036202443 0.213025024984398 0.221305404035469 0.221099661897910 0.213811925380627 0.219739214887501 0.213025024984398 0.215938066435566 5 5|0 -|/ 19506756 19507863 19507473.4 19506553 19509970 - gene protein_coding_gene TRUE TRUE AT5G48100.1 TT10 (TRANSPARENT TESTA 10); laccase Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds. similar to LAC14 (laccase 14), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G09360.1); similar to putative laccase [Zea mays] (GB:CAJ30499.1); contains InterPro domain Multicopper oxidase, copper-binding site; (InterPro:IPR002355); contains InterPro domain Cupredoxin; (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117) 0.00397717662157759 0.0417605785979757 0.967467141588547 1 0.0459403517700014 4.11333396723249 0.00397717662157759 0.0856795711693384 AT5G06650_at 1.55920255110801 1.60360294662349 1.74944887858690 1.98224618566231 1.84929583551164 1.84071270806419 1.79235998263782 1.74950503195278 1.92486684486010 2.02925507818412 2.05205499075790 2.4102101278272 2.25897675857219 2.11553917506262 2.09028063328087 2.04912188157966 2.10605355063215 2.03959734241209 2.0462707591967 0.214487203925854 0.217127332516314 0.212616091114700 0.214323587241739 0.213888103652028 0.213839625086479 0.225286640985456 0.214614497737839 0.218063793829241 0.214068909592713 0.214529720381492 0.226714175487460 0.217432816857352 0.212456410069189 0.212456410069189 0.212456410069189 0.214966031315039 0.213577614274846 0.216837185006032 5 5 + 2043502 2044038 2043808.636 2043487 2044062 + gene protein_coding_gene TRUE TRUE AT5G06650.1 zinc finger (C2H2 type) family protein similar to GIS (GLABROUS INFLORESCENCE STEMS), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G58070.1); similar to zinc finger protein (GB:AAA87304.1); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) 0.0034358947471298 0.0412068037382288 0.967898281382891 1 0.045916979397402 3.83597686581634 0.0034358947471298 0.0417044499228364 AT5G18990_at 2.30580216397443 1.9534966385233 1.98737998453123 1.93787998998246 1.80088333617448 1.71574358161646 1.63697275894030 1.35495269939038 2.44193187641319 2.0609534664685 2.10740637874944 2.20088765824963 2.05552627311062 2.24513791637335 2.72604795385513 2.46898904916622 2.63957173933259 2.40220784706810 1.65217462639524 0.210320374517663 0.215825499709875 0.207687043870062 0.215118132759683 0.212000412381191 0.204898366259207 0.20905719939497 0.204486025481993 0.20233517816095 0.211911629924333 0.206962973244013 0.209617072093245 0.204970425609774 0.209682336939761 0.208178505317549 0.201409687991345 0.202854160571129 0.212122590755651 0.203493430110227 5 5 + 6340699 6341592 6341138.727 6340078 6341616 + gene protein_coding_gene TRUE TRUE AT5G18990.1 pectinesterase family protein similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G24130.1); similar to pectin methylesterase precursor [Physcomitrella patens] (GB:CAH58712.1); contains InterPro domain Virulence factor, pectin lyase fold; (InterPro:IPR011050); contains InterPro domain Pectinesterase; (InterPro:IPR000070) 0.0038156443526558 0.040883354257801 0.96815010701811 1 0.0459034723221705 4.04034314834852 0.0038156443526558 0.0799343078585078 AT5G02430_at 2.02151097578185 2.11851723337421 1.89610582169112 1.60034402984649 1.77698818067309 1.60941150014999 2.49849704723151 2.69766555159946 2.03387707967972 1.83594073188457 3.2181360175225 3.5347883113025 2.94480314320382 3.43265155073933 3.37079729828573 3.12504344955708 2.25663026736777 2.95686677489756 2.24899857498174 0.220137914729042 0.221434006795736 0.219471502303891 0.214018873204217 0.216994477875758 0.220690476567923 0.218775523898325 0.216822578590955 0.22561789957206 0.219069820333499 0.217702215708414 0.220793567341793 0.217897173389864 0.215912000662979 0.222151798061444 0.214018873204217 0.232535763050117 0.225108123685495 0.218630901722073 5 5 + 529238 529793 529530.636 526590 529837 + gene protein_coding_gene TRUE TRUE AT5G02430.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G37670.1); similar to hypothetical protein LOC_Os11g08400 [Oryza sativa (japonica cultivar-group)] (GB:AAX96348.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) -0.00356292144848619 -0.0394447962866182 0.969270158050872 1 0.0458446879307737 4.59966507443924 -0.00356292144848619 0.0702174045435017 AT5G22420_at 0.852458883243747 1.04622092353509 1.01668752964432 1.54790151025159 0.951974487836304 1.19449453982274 1.11837493181719 1.28551683954694 1.30328328229237 1.46713135398376 1.67495317608325 1.5456089123471 1.37848353163232 1.48167300593120 1.33887818134117 1.72558372479839 1.65268325016827 1.48707958560917 1.64284909716703 0.19898819094321 0.203962305843393 0.199437297107105 0.200958366454233 0.200338240447013 0.195514898459066 0.202427828318798 0.194570856359200 0.203282564107857 0.201669749080839 0.198686704267242 0.194570856359200 0.207286511436150 0.206610258038860 0.195757501420654 0.197466195356552 0.197720232766009 0.194570856359200 0.200154616925896 5 5 + 7431667 7432560 7432056.455 7429906 7432589 + gene protein_coding_gene TRUE TRUE AT5G22420.1 acyl CoA reductase, putative similar to acyl CoA reductase, putative / male-sterility protein, putative [Arabidopsis thaliana] (TAIR:AT5G22500.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44550.1); similar to oxidoreductase, acting on the CH-CH group of donors [Arabidopsis thaliana] (TAIR:AT3G44540.1); similar to acyl CoA reductase [Hevea brasiliensis] (GB:AAR88762.1); contains InterPro domain Male sterility; (InterPro:IPR004262); contains InterPro domain Male sterility C-terminal; (InterPro:IPR013120) -0.00411272953732555 -0.0393981664433362 0.969306464893587 1 0.0458428176948244 2.63005662178053 -0.00411272953732555 0.110332956854770 AT5G43560_at 9.2649198898427 9.3053210384092 10.1204777891640 10.0853052186582 10.1878649863327 10.1134757618729 9.20036771495749 9.24675760086256 9.4859116540385 9.19771185655467 9.92215398192142 9.79785331888162 9.84512172210086 9.86771589590254 9.6660283770555 10.1037582798304 9.73284875089177 9.95644424820772 9.33147284409906 0.0804853315498904 0.0852707077296084 0.082651708298993 0.0807247720187911 0.0810109916732574 0.0867194481269288 0.0828567691037267 0.083770852160292 0.087129206488952 0.08104484618167 0.0839898819632671 0.081675279250404 0.0810595708810865 0.0817975032340343 0.0836149745212338 0.0804853315498904 0.084958108637104 0.0821884953439244 0.0810718494898876 5 5 + 17522158 17522719 17522418.091 17517638 17522873 + gene protein_coding_gene TRUE TRUE AT5G43560.1|AT5G43560.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04300.1); similar to MATH domain, putative [Medicago truncatula] (GB:ABE87963.1); similar to Os12g0597100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067191.1); contains InterPro domain TRAF-like; (InterPro:IPR008974); contains InterPro domain MATH; (InterPro:IPR002083); contains InterPro domain TRAF-type; (InterPro:IPR013322) -0.00309590988038311 -0.0386551041487084 0.969885036480715 1 0.0458133132672252 19.290489261719 -0.00309590988038311 0.0177793271984817 AT5G43720_at 5.07505907434535 5.53642595637584 6.3203303884186 6.76526241939726 6.55592908413424 6.41772731595328 6.0251880493263 5.86155966443568 4.50336102432944 5.15488137963377 6.09257278656907 6.23425150482508 6.08110708181788 5.63711495108138 6.51626135789731 5.97658259606864 6.13569251487202 6.24889318568845 5.30289374612034 0.248140897564323 0.242319840850921 0.243759407312295 0.243638750865011 0.245317054532469 0.250115428208142 0.243592477294292 0.246475932193670 0.267265262600875 0.243293715430893 0.244161985285149 0.243121420431503 0.241762491559466 0.246244446307636 0.245906051845201 0.239037946347102 0.262730785942707 0.252719605841227 0.239249378862999 5 5|0 -|/ 17574815 17575605 17575103.8 17574393 17576581 - gene protein_coding_gene TRUE TRUE AT5G43720.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04230.1); similar to unnamed protein product [Ostreococcus tauri] (GB:CAL54460.1); similar to Os03g0797700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051564.1); contains domain no description (G3D.1.20.5.20) -0.00412507922024474 -0.0385243458457258 0.969986850884543 1 0.04580817941559 11.6208626844051 -0.00412507922024474 0.116949349397409 AT5G05900_at 1.76935867432445 1.11708200968806 2.42873324459939 2.05817854577594 1.38279351424290 1.89828891152470 1.67876326246402 1.56971708635079 1.75910749504883 1.54910437409073 1.47370712724471 1.47308205968217 1.87714738614901 1.43860107723855 1.54957674432743 1.45986790327534 2.01976423679261 1.99303560960664 2.0842020029092 0.178406083806527 0.174364405141461 0.179740523635065 0.178968360439438 0.178447740967088 0.191547981302737 0.183297700739756 0.173879070696758 0.178054996841044 0.182993921954909 0.174549156121856 0.174909052122218 0.179154418031244 0.179453032147151 0.174226922334983 0.184151597798689 0.181087496238125 0.179598277332548 0.185700776920363 5 5 + 1775788 1776329 1776009.818 1774514 1776382 + gene protein_coding_gene TRUE TRUE AT5G05900.1 UDP-glucoronosyl/UDP-glucosyl transferase family protein similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05890.1); similar to UDP-glucose: chalcononaringenin 2'-O-glucosyltransferase [Dianthus caryophyllus] (GB:BAD52007.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) 0.00479772551374147 0.0381569997212919 0.970272886399735 1 0.0457938496730795 3.46689893548252 0.00479772551374147 0.158645186525156 AT5G13820_at 2.49618320582810 2.95120365815479 3.45694036836925 3.75644056891429 3.42643844573311 3.50081524546005 2.76685513635544 3.00047627755839 2.18735666643395 2.69168689026331 2.57733250286933 2.23432193403068 2.16326960862163 2.51416733871062 2.45188594853135 2.59526219628193 2.54687857606491 2.15474546600192 2.37136033406465 0.246879766443455 0.239629496523664 0.250810500937880 0.264253831842522 0.249265143707254 0.252317137065442 0.238122994486465 0.241811660472337 0.247840802166958 0.240593683614531 0.244770298334087 0.238122994486465 0.242483066170491 0.242225294193163 0.246109854069560 0.238122994486465 0.242891799197048 0.239193772412338 0.243933959491387 5 0|5 /|+ 4463610 4464334 4463855.3 4460900 4464669 + gene protein_coding_gene TRUE TRUE AT5G13820.1 TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding Encodes a protein that specifically binds plant telomeric DNA repeats. similar to TRFL9 (TRF-LIKE 9), DNA binding [Arabidopsis thaliana] (TAIR:AT3G12560.1); similar to MYB-like DNA-binding protein [Catharanthus roseus] (GB:CAC19789.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Myb, DNA-binding; (InterPro:IPR001005) -0.0038401301680866 -0.0377735310604107 0.970571480471901 1 0.0457790374320652 5.58018623495152 -0.0038401301680866 0.103378216562990 AT5G54420_at 0.88203140327171 0.631973630379862 0.242496259685815 0.98676019168988 0.83911693741936 0.921018059723008 0.756927284045868 0.173282993804491 0.306955339663706 0.833090526122921 0.602798324979141 0.443400029804988 0.521457892126861 0.264253566437997 0.487169954741283 0.610133413656002 0.337928731053855 0.874897223906569 0.549914381186314 0.190248066565695 0.188075934287734 0.191923411386090 0.197830996766656 0.191537304399879 0.191021253066149 0.188075934287734 0.19627256679784 0.195791159913848 0.196671742585722 0.189226687862249 0.189145808202389 0.188075934287734 0.192001001054606 0.199369549646031 0.194095557341691 0.188075934287734 0.199738777409277 0.197793296447939 5 5 + 22113047 22113279 22113178.273 22113030 22113305 + gene protein_coding_gene TRUE TRUE AT5G54420.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54450.1); contains InterPro domain Protein of unknown function DUF295; (InterPro:IPR005174) -0.00495116281658944 -0.0377448272235051 0.970593831369559 1 0.0457779347060048 1.21973833220882 -0.00495116281658944 0.169894043487136 AT5G06080_at 1.18493624253360 0.863324859835375 1.00777741619572 0.886225723990363 1.49013949863724 1.03927528054246 1.32816938787000 1.13917591767905 1.15948535464189 0.955842497457768 1.13353450646544 1.37204302948189 1.48631175372204 1.31021258871179 1.13157572942571 1.14191382906356 1.11810629439109 1.23518180594232 1.11450594040576 0.196176391781000 0.202751843358845 0.195609710018425 0.19864024035163 0.199697353513062 0.195620657056165 0.201839590335794 0.193374791295174 0.197119333783504 0.197615044348907 0.203189677834555 0.192079834683059 0.195101619093706 0.196001317533892 0.195329139433056 0.192079834683059 0.198957884578891 0.193195202237324 0.203599158866947 5 5|0 -|/ 1830818 1831359 1831149.2 1830797 1831428 - gene protein_coding_gene TRUE TRUE AT5G06080.1 LOB domain protein 33 / lateral organ boundaries domain protein 33 (LBD33) Identical to LOB domain-containing protein 33 (LBD33) [Arabidopsis Thaliana] (GB:Q9LHS8); similar to ASL16/LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29, LOB DOMAIN-CONTAINING PROTEIN 29) [Arabidopsis thaliana] (TAIR:AT3G58190.1); similar to Protein of unknown function DUF260 [Medicago truncatula] (GB:ABE83484.1); contains InterPro domain Lateral organ boundaries, LOB; (InterPro:IPR004883) -0.00365821468302324 -0.0359771983173588 0.97197028623828 1 0.0457116418990548 2.27623864406995 -0.00365821468302324 0.103429051245576 AT5G45390_at 10.6344724154402 10.8044195115720 11.2644049883517 11.2639421297629 11.1382933534671 11.0333377671554 10.7796233068629 10.9212091945963 10.7002369495734 10.6180559637844 11.4390759954266 11.465736351709 11.4106543896965 11.3939122381946 11.5733840596128 11.5909781524176 11.0320446457182 11.4995721916150 10.6365354299941 0.0859686840557558 0.084717120225601 0.0876227697895573 0.0815248617766696 0.0830207130288314 0.0831603544145214 0.0860695314358121 0.0828149818385167 0.098400111597634 0.0901652949234134 0.0839526423637088 0.0858499006491502 0.0815248617766696 0.0860518950110866 0.0837652209922437 0.0822609277031731 0.0913840686636956 0.0916464832081223 0.0841484622696066 5 5|0 +|/ 18413892 18414778 18414447.6 18413529 18415343 + gene protein_coding_gene TRUE TRUE AT5G45390.1 CLPP4 (Clp protease proteolytic subunit 4); endopeptidase Clp One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). similar to CLPP3 (Clp protease proteolytic subunit 3), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G66670.1); similar to ATP-dependent Clp protease, proteolytic subunit (ISS) [Ostreococcus tauri] (GB:CAL53944.1); similar to Os10g0580800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065516.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) 0.00298367544012956 0.0357290139427735 0.972163555502648 1 0.0457025884820504 22.0186024338174 0.00298367544012956 0.0423699415272153 AT5G54200_at 3.36865989696111 3.11930267122289 2.95749310990187 3.35703606860266 3.39013809463256 3.54506760093941 3.42299339038686 3.30057321670548 3.59778661983511 3.33980750748013 5.25221100968678 5.53616325011114 4.61809428114338 4.4867941153211 5.36243262199398 4.46027843888613 4.47526165392738 4.33023735899217 3.49599907551204 0.233206005957538 0.238938785380695 0.242223518580013 0.244911680447193 0.238792006642589 0.239342056895294 0.237147150519756 0.233057978628691 0.235534285929875 0.233532060160362 0.247745978010196 0.234729553536992 0.237303961366214 0.247024951820698 0.242591404402067 0.232000161223062 0.239868007769715 0.243219687296561 0.237593931021610 5 5 - 22010830 22011601 22011103.091 22010575 22014302 - gene protein_coding_gene TRUE TRUE AT5G54200.1 WD-40 repeat family protein similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G15470.1); similar to OSJNBa0074L08.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE02139.2); similar to Os04g0678300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054272.1); similar to H0801D08.5 [Oryza sativa (indica cultivar-group)] (GB:CAJ86247.1); contains InterPro domain WD-40 repeat; (InterPro:IPR001680); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.00312623422076186 0.0325090782998794 0.97467118968109 1 0.0455908093864024 7.4541822522692 0.00312623422076186 0.0883771467549973 AT5G23780_at 1.16725459334449 1.81094170243810 1.51932809219350 1.91784382545182 1.38351613023477 1.55881056894158 1.50508762499534 1.52372078873645 1.57229866040119 1.71717257135108 1.70338155347182 2.01744937616105 2.19894733949638 1.91810430999368 1.58392600091103 1.74222625617927 1.66893696845731 2.04049755587110 1.81192338782891 0.190527979999553 0.194220212566383 0.190527979999553 0.197922979633711 0.193987024558551 0.193392786464901 0.194720424297354 0.192768903719634 0.192124774463087 0.199423266496467 0.192829421638559 0.190527979999553 0.201192420660735 0.202891010915809 0.196045119992999 0.190573939788428 0.195578238085397 0.192095670586535 0.197189123174282 5 5 - 8017299 8017828 8017641.091 8017195 8019029 - gene protein_coding_gene TRUE TRUE AT5G23780.1 agenet domain-containing protein similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G23770.1); similar to Agenet domain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAX94920.1); similar to Os11g0302800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067735.1); contains InterPro domain Agenet; (InterPro:IPR008395); contains InterPro domain Protein of unknown function DUF724; (InterPro:IPR007930) 0.00368792615618008 0.0321776931161131 0.974929283928454 1 0.0455799040169585 3.32813718742272 0.00368792615618008 0.134518499150410 AT5G37860_at 1.48355559394178 1.56988031601633 1.66864463339557 1.91136053246214 1.65289363677496 1.73335934002513 1.60177890494194 1.74943219209217 1.68168967585693 1.52412566842914 1.87908316068362 1.99228062780429 2.02564041328126 1.91925803393368 1.50391391249930 1.94314109090785 1.92119403696760 1.79462467066767 2.05624420483522 0.172687346550153 0.173149478924027 0.181221928927237 0.171857593452445 0.174536013759492 0.174805628407746 0.176187637163829 0.181889884686298 0.182972450704002 0.184948809393548 0.175534364009753 0.175876660362245 0.180048820833106 0.179686761418233 0.176018817265859 0.173642782429237 0.178514707214136 0.174020253719133 0.188096691590552 5 5 - 15086825 15087370 15087078.182 15086808 15087785 - gene protein_coding_gene TRUE TRUE AT5G37860.1 copper-binding family protein similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G05220.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71268.1); similar to Heavy metal transport/detoxification protein [Medicago truncatula] (GB:ABE90127.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) -0.00269981832588051 -0.0314561111541964 0.975491287305352 1 0.0455565443387774 3.48456906523138 -0.00269981832588051 0.0532376418789622 AT5G20420_at 1.69010439587622 1.99684259332352 2.11635213479029 1.98121807245276 2.39307332887989 1.87529577860633 1.32422881890926 1.39266180329140 2.01863331330807 2.24031581882634 2.28773056484617 1.95785715967195 1.63956936137828 2.27932606378549 2.13453833960580 1.76765444858352 2.18011722146373 1.87338552346178 2.28992591846991 0.206609479139768 0.206609479139768 0.209569010627409 0.209667828901928 0.213262254586263 0.213689710095704 0.207253693308709 0.209311663014835 0.220758847811615 0.212319653977293 0.211138465188036 0.206609479139768 0.206961925603131 0.209293985775932 0.206609479139768 0.21002543587618 0.208987314144426 0.215249553402851 0.215273390159436 5 5 - 6899126 6899534 6899341.545 6899017 6903268 - gene protein_coding_gene TRUE TRUE AT5G20420.1 CHR42 (chromatin remodeling 42); ATP binding / DNA binding / helicase similar to CHR38 (chromatin remodeling 38), ATP binding / DNA binding / helicase [Arabidopsis thaliana] (TAIR:AT3G42670.1); similar to SNF2-related; ATP-requiring DNA helicase RecQ [Medicago truncatula] (GB:ABE84873.1); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -0.00307773019115215 -0.029815989414886 0.97676874587802 1 0.0455054190976358 3.94521245854172 -0.00307773019115215 0.107395192576512 AT5G57650_at 1.81571122610136 1.45143994809956 1.68050904997169 1.87032574516248 1.7077897200079 1.69674474167409 1.61368517378867 1.50532195203265 1.64207566508464 1.29120282539039 1.66328068094082 1.40586485505066 1.82483049914439 1.32092659745140 1.52090573997387 1.47506791195324 1.76286297358912 2.00732591666462 1.64133655928437 0.156617664837948 0.154346879899947 0.160977607096691 0.160839632333797 0.158798259808324 0.155838457964743 0.165554429362152 0.156300221965611 0.154240526116401 0.162404893138835 0.160443714601582 0.156234031345042 0.158766443029417 0.159412501467215 0.157785267693195 0.158998272992354 0.157266497312883 0.155700492383544 0.156868953035367 5 0|5 /|- 23363041 23363094 23363057.5 23363023 23363511 - gene protein_coding_gene TRUE TRUE AT5G57650.1 eukaryotic translation initiation factor-related 0.00271977649619470 0.0297825653320706 0.976794779962507 1 0.0455044056670836 3.24144335965437 0.00271977649619470 0.0735408048748223 AT5G63630_at 3.04101806979833 3.19934537295437 3.54149431381586 4.07320744843009 3.86478254653496 3.98918204834768 3.4472239808072 3.23661371994265 2.39827474806411 3.35201654745251 3.16940818352163 3.28461287872003 3.35543100836941 3.52941971355272 3.4769052417149 3.78577791944382 3.99487204226425 3.53639619746895 3.33139157265051 0.211654835684988 0.207710322782466 0.221203629135320 0.220194385976320 0.205869904411739 0.21061385016431 0.211489129369711 0.211600772014622 0.224155698005762 0.207546138315801 0.213917843732358 0.211070239776012 0.207284554496261 0.207999561350459 0.204291377327172 0.205874143108231 0.215553111184458 0.219782148139069 0.211470087970134 5 5 - 25489826 25490645 25490212.091 25489824 25492422 - gene protein_coding_gene TRUE TRUE AT5G63630.1 DEAD box RNA helicase, putative Identical to DEAD-box ATP-dependent RNA helicase 31 (EC 3.6.1.-) (RH31) [Arabidopsis Thaliana] (GB:Q9FFQ1;GB:Q9ZRZ6); similar to DEAD box RNA helicase (RH26) [Arabidopsis thaliana] (TAIR:AT5G08610.1); similar to DEAD box RNA helicase (RH25) [Arabidopsis thaliana] (TAIR:AT5G08620.1); similar to myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61516.1); similar to DEAD-box ATP-dependent RNA helicase 31 (GB:Q9FFQ1); similar to putative RNA helicase [Oryza sativa (japonica cultivar-group)] (GB:BAD46119.1); contains InterPro domain DEAD/DEAH box helicase; (InterPro:IPR001410); contains InterPro domain DEAD/DEAH box helicase, N-terminal; (InterPro:IPR011545); contains InterPro domain Helicase, C-terminal; (InterPro:IPR001650) -0.00301796472717475 -0.029512800362846 0.977004901468315 1 0.0454962678960572 6.82102369800606 -0.00301796472717475 0.104925700032716 AT5G25430_at 0.456067184513843 0.832963599618657 0.791006645907906 0.844066532151227 0.333162349182381 0.676143172338566 0.566451746335111 0.482887168880629 1.14731993558082 0.501754011197062 0.874621180622219 0.776545787579296 0.69626688791293 1.23163543955578 0.751190388698948 1.23351580629212 1.33907264288748 0.796860274047534 1.11669891319431 0.190527766316156 0.192986119314366 0.191534868001648 0.196779769369241 0.193641770132584 0.19238218323905 0.196793320986905 0.193026706046137 0.20070082946512 0.200179199751587 0.192691606874678 0.193325006803027 0.193207431199155 0.190527766316156 0.206431405270485 0.190527766316156 0.191868469630687 0.193666711128432 0.195844688344920 5 5|0 +|/ 8853489 8854012 8853768.667 8851254 8854262 + gene protein_coding_gene TRUE TRUE AT5G25430.1 anion exchange protein family similar to anion exchanger [Arabidopsis thaliana] (TAIR:AT4G32510.1); similar to anion exchange family protein [Arabidopsis thaliana] (TAIR:AT1G15460.1); similar to anion exchange family protein [Arabidopsis thaliana] (TAIR:AT1G74810.1); similar to HCO3-transporter [Medicago truncatula] (GB:ABE78978.1); similar to boron transporter [Oryza sativa (japonica cultivar-group)] (GB:ABD78950.1); similar to boron transporter [Oryza sativa (japonica cultivar-group)] (GB:ABD78951.1); contains InterPro domain HCO3- transporter, eukaryote; (InterPro:IPR003020); contains InterPro domain HCO3-transporter; (InterPro:IPR011531) 0.00285135470483422 0.0294943341824734 0.977019284950906 1 0.0454957135497804 1.56503746866951 0.00285135470483422 0.0898360651555117 AT5G29210_at 0.93265144719317 0.90129239995969 1.08403638624915 0.622948909347592 1.10307010242178 1.14669831634149 1.03445930553598 1.21345169463969 1.06538764433678 1.04144556637224 1.47409554546711 1.3591911649159 1.00272943207535 1.26668490168658 1.50959864042175 1.07302528631818 1.28015436457207 1.10115067804644 1.16327999337966 0.201923819964617 0.199129107447063 0.199129107447063 0.207747075357259 0.199275038601682 0.214752596918457 0.218830960059404 0.201831609217895 0.212004327547112 0.199129107447063 0.203672136805513 0.202741137439288 0.203233264950105 0.207669660990121 0.209454748187062 0.201257968810282 0.214393464405124 0.207514862933431 0.202312938909957 5 5 - 11153475 11153908 11153696 11153470 11153949 - gene protein_coding_gene TRUE TRUE AT5G29210.1 contains InterPro domain Calycin-like; (InterPro:IPR011038) -0.00273774341411898 -0.0287034707870464 0.977635303908017 1 0.0454722977686048 2.17900931340314 -0.00273774341411898 0.0860982602034848 AT5G36290_at 7.63668013463827 8.10979462126578 8.42771635964864 8.37699559448128 8.94101924530746 8.36865879109314 7.84095054009434 8.12098601839081 8.2640811907029 7.46544708879577 9.21620493699236 9.2786040822993 9.07291801652276 8.86729709310894 9.15880571428915 8.62699456407603 8.42950121081223 8.64921723979755 7.56189991380221 0.205464370792403 0.174453866266030 0.189730187839585 0.191606932060781 0.184958956806240 0.191679133098727 0.198077296733598 0.18246699813295 0.197340275739791 0.188178430408244 0.18487532341733 0.179012731623724 0.186834206847722 0.198940626178038 0.174277825154054 0.180543409058826 0.180901019064309 0.191484049978275 0.189053030607996 5 5|0 +|/ 14320803 14322140 14321572.571 14319969 14322406 + gene protein_coding_gene TRUE TRUE AT5G36290.1|AT5G36290.2 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G25520.1); similar to Uncharacterized protein family UPF0016 containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22482.1); similar to Os11g0472500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067880.1); similar to Os08g0528500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062312.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) 0.00315492918937843 0.0271986310730666 0.978807494891444 1 0.0454294999325295 16.5659762906171 0.00315492918937843 0.137622125021864 AT5G03870_at 2.12668989531081 2.26111510997546 2.19796962235345 2.06799779723947 1.81042608094769 2.06360930773968 1.97500559428086 2.16234962935667 2.36911043466905 2.09642955067924 2.46626478135756 2.64087956486848 2.68941930170294 2.76084334637945 2.65452345511228 2.59888077209934 2.54876466391079 2.74876864756763 1.86662215373824 0.238478817284106 0.238564140429512 0.237910842506969 0.237226330374205 0.238479142369237 0.237005410056741 0.239515825139451 0.237605193180259 0.240912096080305 0.23591245433926 0.232794663021599 0.232061877476764 0.23309245447877 0.238233875079172 0.238073301311718 0.237527306020116 0.233483309908706 0.232061877476764 0.236984195912984 5 5 - 1035938 1036387 1036166.182 1035657 1036966 - gene protein_coding_gene TRUE TRUE AT5G03870.1 glutaredoxin family protein similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G10630.1); similar to OSIGBa0134P10.4 [Oryza sativa (indica cultivar-group)] (GB:CAH67358.1); similar to hypothetical protein MtrDRAFT_AC139526g15v1 [Medicago truncatula] (GB:ABE80146.1); similar to Os04g0412800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052743.1); contains InterPro domain Thioredoxin-like fold; (InterPro:IPR012336); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Thioredoxin fold; (InterPro:IPR012335) 0.00234822316318262 0.0265646873451814 0.979301319597576 1 0.0454121601837111 4.45777726947734 0.00234822316318262 0.0633867715046883 AT5G05350_at 1.25484793781851 1.98855777877253 1.98194111697485 2.04424753205818 1.68766566809386 1.74138845696607 1.33330359561736 2.10125676747623 1.75083046862730 2.10041234460111 2.02369572921008 2.06002284989660 1.87831759967688 2.04443122572560 1.98144340400392 1.97006229963393 2.08204699124964 2.27191035381404 1.92621297531346 0.222789261725593 0.225074745672195 0.22408099726122 0.232451002188784 0.235166085817572 0.222296349223769 0.234590867695664 0.220160506648721 0.231489248491698 0.22529368877836 0.228238959951152 0.221221909113653 0.222179649402185 0.220160506648721 0.228342769923141 0.226202023446444 0.227951747810943 0.225359378732557 0.228716687610255 5 5 + 1586795 1587285 1587048.455 1585298 1587518 + gene protein_coding_gene TRUE TRUE AT5G05350.1 similar to SAG20 (WOUND-INDUCED PROTEIN 12) [Arabidopsis thaliana] (TAIR:AT3G10980.1); similar to Uncharacterized Cys-rich domain [Medicago truncatula] (GB:ABE84891.1); contains InterPro domain Protein of unknown function Cys-rich; (InterPro:IPR006461) 0.00362036314090824 0.0261664106057573 0.979611570878714 1 0.0454014755658763 3.74905605813818 0.00362036314090824 0.184354024027739 AT5G37880_at 1.79286221016210 1.47921082560297 2.10080075886115 1.95632284445170 1.71753340233723 1.84385315239159 1.52442529211605 1.58272106256180 2.08129853818352 1.55621241319313 1.50520269514050 1.93944410361824 1.54693987139296 1.50617213940802 1.82172742333252 1.67009199002283 2.09102598550173 1.6065400230817 1.61962530371480 0.176390950500612 0.176390950500612 0.176390950500612 0.178570264000042 0.180489398223295 0.181157048216973 0.182435201349137 0.179547559526751 0.181285848911948 0.186003876585053 0.178150835319467 0.182461022618953 0.185337599314279 0.177649498660182 0.178002927426676 0.176390950500612 0.194163039786035 0.180561108469477 0.176390950500612 5 5 - 15101710 15102190 15101973.909 15101690 15102218 - gene protein_coding_gene TRUE TRUE AT5G37880.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18420.1); similar to hypothetical protein 26.t00076 [Brassica oleracea] (GB:ABD65021.1) 0.00229898186774746 0.0259243126350257 0.97980016310177 1 0.0453950596374494 3.48135208387781 0.00229898186774746 0.064427982874548 AT5G55610_at 8.26975702438866 8.39697385574492 8.84158967966967 8.9805104504665 9.14619648438576 8.52750304860147 8.70433720846545 8.49959411323823 7.18685853993907 7.36750868863876 8.39857784135143 8.61171726491411 8.46302355023235 8.68100364651168 8.76850524746754 8.690179643305 8.47873961773832 8.51977909261763 7.18662654226333 0.153922155401605 0.146849697123209 0.150134374821854 0.152896821141782 0.149912565187393 0.161520554560647 0.148448653795702 0.144814535997984 0.169943526923413 0.173621489167829 0.154787196558327 0.15113817089242 0.149047065190824 0.150863458419555 0.145443385307983 0.146892087542132 0.152277511511769 0.148677352830365 0.162489160335531 5 5|0 +|/ 22544095 22545048 22544530.5 22543033 22545336 + gene protein_coding_gene TRUE TRUE AT5G55610.1|AT5G55610.2 similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE92111.1) -0.00277323295805387 -0.0258549103565806 0.97985422711519 1 0.0453932313790087 16.5825270639356 -0.00277323295805387 0.117394907130476 AT5G02530_at 7.23635926166274 7.54661610511431 7.82388528446024 7.9662943409752 8.65234684272041 8.07803195590572 7.34712615426895 7.61257906020706 7.30745438542344 6.71404095636256 8.09285721517106 8.28540576412292 8.06717362290338 8.18420196891629 8.31380605156832 8.08747896667744 7.80783451847464 8.14545269649396 6.66584193967653 0.198523874928948 0.195408030131986 0.206847116323152 0.209389836639328 0.211432209023453 0.207602157633211 0.202796041468550 0.200873667334156 0.211581912572377 0.22022847645151 0.207264055936557 0.210410122031096 0.200002861592480 0.217650779955893 0.201857389057975 0.202944610615547 0.216865495486047 0.201914003275426 0.202225944683956 5 5|0 -|/ 564428 565345 564909.7 564084 565861 - gene protein_coding_gene TRUE TRUE AT5G02530.1 RNA and export factor-binding protein, putative similar to RNA and export factor-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G59950.1); similar to ALY protein [Nicotiana benthamiana] (GB:CAG26903.1); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.00278482638465816 -0.0252681421136887 0.98031132073558 1 0.0453779700468205 15.2923075978453 -0.00278482638465816 0.124412039626028 AT5G57950_at 6.07604988875479 6.22359232900425 7.06538869080948 6.97034678908561 7.60787468735286 7.48025242879975 5.06502694776696 5.73661753898072 5.88800262417303 5.05813733738259 5.9627377587109 5.8358569828777 6.1033038130892 6.29696515739064 5.78884560282591 6.14405266571106 5.87506127529035 6.12323951992996 5.40816350234457 0.22182472783282 0.225188493779212 0.223230945849166 0.222324361094788 0.234178248443081 0.222619551002603 0.220733310237770 0.221902709452819 0.236507746939042 0.233053656364138 0.217715653356266 0.219023299854003 0.214185011963537 0.213144046636878 0.226542510529956 0.21470940332517 0.22988347619377 0.229941568107968 0.227553009729417 5 0|5 /|+ 23478634 23479158 23478967.125 23477935 23479614 + gene protein_coding_gene TRUE TRUE AT5G57950.1 26S proteasome regulatory subunit, putative similar to PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (GB:XP_785837.1); similar to Os09g0420600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063197.1); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478) -0.00273305034834048 -0.0250175665823754 0.980506521839578 1 0.0453715595271307 12.2619898300418 -0.00273305034834048 0.12213823735402 AT5G49940_at 10.6306014399866 10.5800459172920 11.3057379914868 11.2744792841499 11.3672479631194 11.2616468956354 11.1298962820823 10.9716235162391 10.5396859762344 10.7392054261747 11.3574884768545 11.1790060231889 11.1991624374959 11.2729594170077 11.3429461296137 11.3704364335092 11.2184502544497 11.3023678084210 10.5192937064914 0.0784346424414298 0.0771550006590078 0.0793726845498727 0.0766898465998229 0.0805910285819522 0.0783797613573136 0.0786672559471057 0.0771822222727254 0.0882140376299452 0.0795404491521124 0.075091763200347 0.0750307968705604 0.0772797718802661 0.0761597823926739 0.0756422493797247 0.075601151612131 0.0771931289755035 0.0777649775126886 0.0811388129643656 5 5|0 +|/ 20332923 20334422 20333903.7 20332624 20334626 + gene protein_coding_gene TRUE TRUE AT5G49940.1|AT5G49940.2 NFU2 (NFU domain protein 2) Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast. Identical to NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V) (NIFU2) [Arabidopsis Thaliana] (GB:Q93W20;GB:Q9LTX6); similar to NFU3 (NFU domain protein 3) [Arabidopsis thaliana] (TAIR:AT4G25910.1); similar to Os11g0181500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065900.1); similar to Similar to seven transmembrane protein Mlo4 [Oryza sativa (japonica cultivar-group)] (GB:AAX96187.1); contains InterPro domain Nitrogen-fixing NifU, C-terminal; (InterPro:IPR001075) -0.00203825918506784 -0.0248183504084201 0.980661714393735 1 0.0453665085250541 22.0050334906828 -0.00203825918506784 0.0344960160550072 AT5G18000_at 1.49662741923806 1.46550154011912 1.75627551946697 1.67661075036763 1.07057724796069 1.73533126851846 1.37034756705597 1.36812720403177 1.27548591931377 1.47441902551582 1.49875334440427 1.38846079067238 1.41940670405667 1.11308458913178 1.25746147045332 1.14045061423570 1.57904915522289 1.61919923094897 1.2181262370451 0.205707993531366 0.203911747554147 0.207038649343757 0.203911747554147 0.211102530616003 0.213167171693438 0.203911747554147 0.204750552654727 0.212383791712351 0.208590079086980 0.216996331524364 0.203911747554147 0.213736265588771 0.206733715890717 0.210677794449307 0.210842627997431 0.209764872074329 0.209467706552417 0.207883792223705 5 5|0 -|/ 5960076 5960592 5960283.2 5959902 5961644 - gene protein_coding_gene TRUE TRUE AT5G18000.1 transcriptional factor B3 family protein similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT5G18090.1); similar to transcriptional factor B3 family protein / AT hook motif-containing protein [Musa balbisiana] (GB:ABF70122.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) -0.00257882240342283 -0.0241732018241072 0.981164301085815 1 0.0453504282912594 2.84225496360266 -0.00257882240342283 0.115987702932653 AT5G08740_at 8.36436972669337 8.08081993165595 9.0895198673663 8.9333373275329 9.3668716344136 8.93880270395803 9.1510802839783 8.83691116186886 8.04030849162623 8.21855498305955 9.42290826244157 9.09688859027085 9.19724519023656 9.2409696616518 9.11698430572455 9.34841069765891 9.29500563271286 9.1012418553231 8.01240426576161 0.140859268300330 0.142941003587289 0.141590395823706 0.141698752706925 0.135931035330836 0.141485386544960 0.139844170241562 0.145771385063133 0.157275339649125 0.149621966917555 0.146802585850430 0.139359060225886 0.135931035330836 0.143316872874833 0.161430101059841 0.140619912301881 0.144064843642308 0.149874034445245 0.146492343987795 5 5|0 -|/ 2849270 2849781 2849523.4 2848507 2851429 - gene protein_coding_gene TRUE TRUE AT5G08740.1 NDC1 (NAD(P)H DEHYDROGENASE C1); NADH dehydrogenase similar to NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G07180.1); similar to Pyridine nucleotide-disulphide oxidoreductase, class I [Medicago truncatula] (GB:ABE86168.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase; (InterPro:IPR013027) -0.00244753147535337 -0.0236905549587784 0.98154030054455 1 0.0453386752872316 17.5041537570092 -0.00244753147535337 0.107619788673363 AT5G18190_at 8.39041681530324 8.51292075566773 9.01587398533425 9.01765107093099 9.4310408448841 9.26009142476602 8.40403161927856 8.3950040172868 8.08992105733012 8.18072053862102 9.13132916426493 9.0900466533904 9.0155813078931 8.92355281080002 8.71005785824003 9.27079037104748 8.96058973908166 9.15602453595751 8.21421551051598 0.164782219286826 0.162059746895595 0.156467320163257 0.167103017590552 0.158819037408939 0.158839456313780 0.155935257686600 0.167377873591312 0.1812723553927 0.163315964024593 0.166225035079173 0.164669261544068 0.158263502488041 0.171361255614315 0.162030491990010 0.159457367869120 0.170348574162700 0.161874071588572 0.15992508867882 5 5|0 -|/ 6010367 6011159 6010790.4 6009969 6014691 - gene protein_coding_gene TRUE TRUE AT5G18190.1|AT5G18190.2 protein kinase family protein similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G25760.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G13670.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G03940.1); similar to putative serine/threonine protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD87518.1); similar to Protein kinase-like [Medicago truncatula] (GB:ABE93337.1); similar to putative casein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT44311.1); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719) -0.00186260074662781 -0.0225927979490774 0.982395510543327 1 0.0453128261967085 17.4003116119682 -0.00186260074662781 0.0364301956535430 AT5G65100_at 1.00785424628257 1.14220773013427 1.51605707779955 1.74216216667082 1.32614709376352 1.15432898055106 1.02771378689205 1.63391541967161 1.08001836715677 1.54738174226133 1.18862845028713 1.72132682504170 1.24932507874733 1.14872149413896 1.15988292877864 1.25989509457764 1.44199615373021 1.5041466332819 1.51949636181602 0.180596716216008 0.180596716216008 0.188976136571014 0.187166762187489 0.186344796505886 0.182396780760904 0.180596716216008 0.184627686919008 0.183709397673879 0.187539789535661 0.194140836773013 0.184480276792762 0.191900566705443 0.180596716216008 0.181124474098414 0.186051009489113 0.185680000451467 0.183944290726755 0.197684972066892 5 5 - 26024132 26024625 26024355.091 26024061 26025734 - gene protein_coding_gene TRUE TRUE AT5G65100.1 ethylene insensitive 3 family protein Identical to Putative ETHYLENE-INSENSITIVE3-like 5 protein (EIL5) [Arabidopsis Thaliana] (GB:Q9FJQ5); similar to ethylene insensitive 3 family protein [Arabidopsis thaliana] (TAIR:AT5G10120.1); similar to 52O08_27 [Brassica rapa subsp. pekinensis] (GB:AAZ67573.1); contains InterPro domain Ethylene insensitive 3; (InterPro:IPR006957) 0.00242052805153042 0.0225003978416226 0.982467496124011 1 0.0453107063769575 2.67706789075450 0.00242052805153042 0.118156707766726 AT5G66660_at 1.70506833223744 1.68747555724419 1.86127812763895 1.64974972595805 1.46163760857209 1.88604823691513 1.73190424602838 1.65779231938877 1.43670068892829 1.70545457921609 1.91377555781631 1.61467588123677 1.94404620950464 1.68204484244625 2.11522509092987 1.59348875773639 1.7657300395552 2.01998531626197 1.63027488920787 0.198044245249318 0.190165744692322 0.207465074983083 0.198067704351735 0.205673615045425 0.196023699203691 0.206367998342057 0.190253815171981 0.204288586014065 0.194137255799737 0.201560572308431 0.202888967004851 0.201172115954454 0.197776406963306 0.194418191832681 0.201387108254824 0.195213797552601 0.205831227881143 0.195191149833212 5 5 - 26626537 26627107 26626860.091 26626534 26627730 - gene protein_coding_gene TRUE TRUE AT5G66660.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G66670.2); similar to Protein of unknown function DUF677 [Medicago truncatula] (GB:ABE78510.1); contains InterPro domain Protein of unknown function DUF677; (InterPro:IPR007749) 0.00211818366924865 0.022444443766271 0.98251108799938 1 0.0453094269156192 3.41608502644121 0.00211818366924865 0.083115027441576 AT5G23640_at 1.08779995058922 0.87998870128774 1.18480131786362 0.975725526243338 0.98835793469041 0.981331456234543 0.951078624127767 0.601756462376146 0.868004978631807 0.717478454827968 0.801114318167075 0.550917057277583 0.829833822164905 0.964507924172759 0.843194708458067 0.73606681571709 1.25768956938241 0.736916643939193 1.01370361103899 0.235980341969506 0.237102232015771 0.229793536767832 0.231724604811077 0.228561198316009 0.234654666468915 0.228921262793168 0.22115383909094 0.225890995882644 0.233699223891358 0.225443430538858 0.220253559872146 0.233587141001929 0.227955732292786 0.232671915491912 0.224378343899603 0.220253559872146 0.225408203057161 0.228195559646221 5 0|5 /|- 7968268 7968387 7968318.889 7968262 7968505 - gene protein_coding_gene TRUE TRUE AT5G23640.1 unknown protein 0.00205180424992960 0.0220472430906371 0.98282053495418 1 0.045300435980091 1.80956789113133 0.00205180424992960 0.0791095591138546 AT5G15150_at 0.900191424728024 1.07662019711799 1.14552806011794 1.36685959757719 0.726998136899427 1.26732276763606 1.10216508755490 1.08887129555016 1.21324250570870 1.01737952173794 1.32653738925802 0.965444604577004 1.18614503541259 1.19244175384142 1.33888503045730 1.14500002142100 1.26640981833156 1.97697195567560 1.47391832366869 0.203812618390524 0.205740348277623 0.210555465475398 0.209163790534435 0.210312547537009 0.210117128372968 0.210757232748823 0.208019206111822 0.214382393918445 0.216571846679014 0.216485904525411 0.209252657587541 0.205598553575232 0.209965942205254 0.212461573479665 0.203812618390524 0.215670491883661 0.214142303518336 0.209601721620895 5 5 - 4913965 4915007 4914393 4913702 4915895 - gene protein_coding_gene TRUE TRUE AT5G15150.1 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3); DNA binding / transcription factor homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem (in situ hybridization). Identical to Homeobox-leucine zipper protein HAT7 (Homeodomain-leucine zipper protein HAT7) (HD-ZIP protein 7) (Homeodomain transcription factor ATHB-3) (HD-ZIP protein ATHB-3) (HAT7) [Arabidopsis Thaliana] (GB:Q00466;GB:Q0WNS2;GB:Q9LXG6); similar to ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01220.1); similar to homeobox protein (GB:AAA56906.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeobox; (InterPro:IPR001356); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeodomain-like; (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047) -0.00212842200653959 -0.020762021597815 0.983821831946091 1 0.0452724440156633 2.35160768831117 -0.00212842200653959 0.105583512758513 AT5G39630_at 1.07213316158474 1.0308001372773 1.18646214306119 1.62563322417466 1.01956922672935 1.25450578901081 0.979249521328475 1.21298452153232 1.16783451965898 1.20832153021280 1.00792222433490 1.36234358313302 1.09469168371982 1.33804623763333 1.18769650770517 1.27384879961207 1.65044994759944 1.6093589814603 1.68036888570822 0.164113277649646 0.161850466314588 0.167403125480425 0.165116490710528 0.161850466314588 0.173038806308718 0.169793818173018 0.170282927650299 0.164936046791979 0.171376885200532 0.168275877604976 0.166263293052674 0.172171121004327 0.171716394448486 0.165761172622010 0.166427904447592 0.164882288299226 0.167780222609423 0.172999355904260 5 5|0 +|/ 15885514 15886897 15886263.8 15885490 15886942 + gene protein_coding_gene TRUE TRUE AT5G39630.1 vesicle transport v-SNARE family protein similar to VTI11 (VESICLE TRANSPORT V-SNARE 11, vesicle transport v-SNARE 11), receptor [Arabidopsis thaliana] (TAIR:AT5G39510.1); similar to Vesicle transport v-SNARE [Medicago truncatula] (GB:ABE86759.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) -0.00197025019373775 -0.0199623482331130 0.98444486047016 1 0.0452558753872881 2.50652707767556 -0.00197025019373775 0.095479591296871 AT5G67550_at 1.30681532713485 1.31583986708569 1.59462020045850 1.45419850890681 1.25606065932259 1.48681282952013 1.86890304269436 1.17417958544111 1.62577205077083 1.38295854370818 2.00763912763856 1.98850849988217 1.74369446490166 1.43028046417902 2.12020881060694 1.65022780957964 1.94251815679399 1.58082244781735 1.82540104766564 0.182884923733544 0.183891451228942 0.184718811801498 0.183736281792024 0.186641786940499 0.185371421574621 0.183481867651723 0.183156366611115 0.180714880647461 0.183822733163887 0.189273658448847 0.193573526795834 0.192293292603732 0.181394710186621 0.181512028451931 0.183919329637372 0.187023096146815 0.187002294524079 0.185119700964021 5 5 - 26964226 26964636 26964402.909 26963980 26966387 - gene protein_coding_gene TRUE TRUE AT5G67550.1 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71110.1); similar to hypothetical protein LOC_Os11g16310 [Oryza sativa (japonica cultivar-group)] (GB:AAX96090.1); similar to Os11g0264500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067653.1) 0.00204858308994682 0.0182602045045266 0.985771042744785 1 0.0452227746539721 3.14186109593207 0.00204858308994682 0.12900258202273 AT5G22470_at 1.77559689788460 1.74231768767478 2.36607698709265 1.82601688376297 1.9435029590877 2.02328355851424 1.91340726638339 1.14421210880942 1.63020769069197 1.80860134907569 1.49207658560767 1.70091525352768 1.54767655785078 1.62290769217010 1.58483943040657 1.70427609131654 1.43655207306352 1.91682405631194 1.82764913130305 0.202487680841899 0.199353037172842 0.196550220150078 0.202095213761179 0.196477025646221 0.216759280170668 0.204629729348822 0.204528103888025 0.201319703347314 0.200310888243570 0.200243533198738 0.199302316434228 0.203334018906292 0.199328475681961 0.197909044879181 0.196477025646221 0.205386542889446 0.201591925718933 0.213100540074455 5 5|0 +|/ 7449899 7450528 7450238.75 7446977 7451052 + gene protein_coding_gene TRUE TRUE AT5G22470.1 NAD+ ADP-ribosyltransferase Identical to Poly [ADP-ribose] polymerase 3 (EC 2.4.2.30) (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) (PARP3) [Arabidopsis Thaliana] (GB:Q9FK91;GB:Q8GXP3); similar to poly (ADP-ribose) polymerase, putative / NAD(+) ADP-ribosyltransferase, putative / poly(ADP-ribose) synthetase, putative [Arabidopsis thaliana] (TAIR:AT2G31320.1); similar to Poly [ADP-ribose] polymerase 3 (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) (GB:Q9SWB4); similar to putative seed maturation protein [Oryza sativa (japonica cultivar-group)] (GB:BAD25449.1); similar to Putative poly [ADP-ribose] polymerase 3 (PARP-3) (ADPRT 3) (NAD(+) ADP-ribosyltransferase 3) (Poly[ADP-ribose] synthetase 3) (GB:Q1SGF1); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain Poly(ADP-ribose) polymerase, regulatory region; (InterPro:IPR004102); contains InterPro domain PADR1; (InterPro:IPR012982); contains InterPro domain WGR; (InterPro:IPR008893); contains InterPro domain PARP, catalytic; (InterPro:IPR012317); contains InterPro domain Poly(ADP-ribose) polymerase, catalytic region; (InterPro:IPR001290) -0.00232012047362706 -0.0181280334308401 0.985874022438663 1 0.0452203277288698 3.53242405592893 -0.00232012047362706 0.163332669443449 AT5G15360_at 0.608916370921945 0.583653000116491 1.05459411904539 0.880264479367498 0.686954460339951 0.693401152383996 0.874979919993223 0.695558631906974 1.17271389819900 0.773927306848717 0.993290340937184 0.75689993172066 1.24688697156023 1.23447276721931 0.880051351122806 0.804252070205506 1.22003550685539 1.19312539192923 1.21623400862068 0.161752136134708 0.160417342436888 0.164786793995584 0.170621653478318 0.174157599168165 0.167748414775397 0.162950600839848 0.165508747001609 0.173871580636842 0.174644667280952 0.168060700659936 0.167234813276571 0.170409220802508 0.160417342436888 0.164452323177955 0.164585594047519 0.167841516021723 0.168823135912914 0.162000602524032 5 5|0 -|/ 4987502 4988546 4987982 4987440 4989185 - gene protein_coding_gene TRUE TRUE AT5G15360.1 unknown protein 0.00151624550681398 0.0181080782224579 0.985889570351694 1 0.0452199598361364 1.80749953142606 0.00151624550681398 0.0435268154226762 AT5G40030_at 1.46286478649725 1.30910736287579 1.75532847343974 1.53359367689922 1.59782801515463 1.56624582729212 1.61682964363721 1.30919834253238 1.56899490947307 1.79147514749205 1.97094075854479 1.74286657154530 1.83374492032373 2.01711919013899 1.32953083302247 1.73856041293840 1.89953157467198 2.11137143669328 1.95780632488496 0.210108710420763 0.213633756418867 0.213105445686246 0.213956356292197 0.210108710420763 0.214484778233745 0.218663102920739 0.218635306085249 0.227641091056414 0.224731578380437 0.228894155015003 0.214244713907134 0.219832915838980 0.217560989720655 0.221963537166381 0.214259187063272 0.219036803963816 0.217115902603343 0.219997248013704 5 5 + 16044913 16045419 16045126.545 16043455 16045511 + gene protein_coding_gene TRUE TRUE AT5G40030.1 protein kinase, putative similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47750.1); similar to stpk1 protein kinase [Solanum tuberosum] (GB:CAA62476.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase-like; (InterPro:IPR011009); contains InterPro domain Protein kinase; (InterPro:IPR000719); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) 0.00143884970902386 0.015887473936699 0.987619770165352 1 0.045181552136113 3.32048301913349 0.00143884970902386 0.0710245766816825 AT5G45300_at 3.72245947277291 3.70697229276409 4.38454578534658 4.0749246629307 4.8114799261171 5.02325333073515 4.2343716209055 4.25537947683667 3.13296712233437 3.19770933476802 3.69280434969895 4.31481330496331 4.26793842349331 4.61442029939903 4.19530898161048 4.22174548120586 3.80662041777613 4.28336821843604 3.52472749213601 0.217525799569841 0.225497338715311 0.219030170582610 0.214512667045647 0.219415662450704 0.221145777271792 0.217046547679361 0.218275606373402 0.220394939332631 0.214512667045647 0.215366012127885 0.217544112565241 0.225235844753337 0.215990659628005 0.227864517816179 0.214512667045647 0.250960759100405 0.214512667045647 0.215476414298494 5 5 + 18373089 18373760 18373412.182 18370835 18374102 + gene protein_coding_gene TRUE TRUE AT5G45300.1|AT5G45300.2 BMY2; beta-amylase similar to BMY4 (beta-amylase 4), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G45880.1); similar to Os02g0129600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045777.1); similar to Os09g0569200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063976.1); similar to beta-amylase [Castanea crenata] (GB:AAK30294.1); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain BZR1, transcriptional repressor; (InterPro:IPR008540) -0.00130886231945393 -0.0147297635095367 0.988521835664069 1 0.0451635180802042 8.0065543632106 -0.00130886231945393 0.0650727871051747 AT5G41310_at 1.63115390858352 1.49030230719803 1.77467752286463 1.99692280928077 1.26296500791572 1.89835894837371 1.51377192156890 1.67044811722681 1.34364118931702 1.81540225877961 1.93170224095377 1.81502702528474 1.79637992361698 1.60234214274936 2.10749042422697 1.70993608412940 1.67862661419598 1.57714034079408 1.89858374553827 0.191307037837152 0.196844570338378 0.188533799075953 0.190003981897433 0.191656209750803 0.197289881958204 0.188213073190041 0.187719954288603 0.195589325094463 0.193177519709992 0.195668191002223 0.189460689792488 0.195749727855262 0.191037218521116 0.192058855439718 0.188167884529411 0.194161742459656 0.196078919002280 0.191942877181812 5 5 - 16533873 16534625 16534211.364 16533862 16539620 - gene protein_coding_gene TRUE TRUE AT5G41310.1 kinesin motor protein-related similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G63640.1); similar to microtubule motor [Arabidopsis thaliana] (TAIR:AT1G73860.1); similar to Os01g0744000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044222.1); similar to Os05g0521300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056074.1); similar to putative kinesin [Oryza sativa (japonica cultivar-group)] (GB:AAT69670.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Calponin-like actin-binding; (InterPro:IPR001715) -0.00160752755752158 -0.0147191663714176 0.988530092828226 1 0.0451633593036537 3.38642823322928 -0.00160752755752158 0.122062439774707 AT5G03450_at 4.22594484501057 4.68370193161591 5.32790616235031 5.45591894864624 5.36018704602218 5.6165844440387 4.5320293441256 4.37398812736966 4.06985639459468 4.27080856961359 4.59738919044541 5.19007113742942 4.97442162633021 4.79824200926584 4.99894854814942 4.8915639815152 4.90351927826195 4.89551054889612 4.0079572968763 0.190234191256589 0.190986036144695 0.193280893867235 0.199262556350152 0.193413399412975 0.201587256437535 0.196202641340371 0.196576107869950 0.204764109642765 0.195767620076259 0.194022303167504 0.195292711516954 0.190794570717694 0.193598910538678 0.206490169537184 0.199525575822293 0.209275268124807 0.188605018773130 0.188056471330569 5 0|5 /|- 859005 859411 859194.3 858768 862296 - gene protein_coding_gene TRUE TRUE AT5G03450.1 zinc finger (C3HC4-type RING finger) family protein similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03750.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN62783.1); contains InterPro domain WD40-like; (InterPro:IPR011046); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) 0.00143877485731381 0.0144749202003328 0.988720406932375 1 0.0451597314390578 9.4582404613465 0.00143877485731381 0.097380040660396 AT5G64500_at 9.03333429602935 8.96170794620638 9.69793863371094 9.54890667851294 9.95146902853456 9.64312585363077 8.99764555423691 8.49511126778883 9.04256060451519 8.71042984957054 9.74409385319653 9.48595594407173 9.53971772974895 9.66960097707192 9.3294355196291 9.41821750495003 9.4033760032128 9.4631499798626 8.82138797028464 0.111918757127400 0.109845716927668 0.115789106391442 0.117398212901606 0.116993540273539 0.116718714399362 0.114709348121694 0.116772440925149 0.128541107622548 0.121010320894140 0.10943325827585 0.109513753224303 0.109931400466930 0.110333278977212 0.109234127643834 0.110715143791391 0.117386456336620 0.118332222401890 0.122418643145332 5 5|0 +|/ 25799582 25800657 25800246.4 25797608 25800880 + gene protein_coding_gene TRUE TRUE AT5G64500.1 membrane protein-related similar to transporter-related [Arabidopsis thaliana] (TAIR:AT2G22730.1); similar to Major facilitator superfamily MFS_1 [Medicago truncatula] (GB:ABE84791.1); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Major facilitator superfamily MFS_1; (InterPro:IPR011701) -0.00147076701780846 -0.0143258901386145 0.988836529986043 1 0.0451575476672618 18.4735646975437 -0.00147076701780846 0.105967841311157 AT5G25500_at 2.49888868316279 2.85314002041096 2.90995735286780 2.84202006413544 2.736327639489 2.73406438170912 2.39326921605971 2.11307432859931 2.2689246457548 2.34106163010468 2.41261937924011 2.25383744462748 2.25678954654860 2.54434649356611 2.58593015356537 2.37261336961674 2.97270339828711 2.41036312444431 2.16070185629864 0.195067310021137 0.190317616687820 0.20135650107568 0.197053008833373 0.192426103713177 0.195851847298539 0.188306963152956 0.198686475971605 0.1922310560815 0.190050901529259 0.198475938429245 0.189431802630652 0.191910618851975 0.189369390437425 0.193401690107570 0.192564867033485 0.193956470488251 0.193232583130829 0.191181559384393 5 5 + 8881797 8882350 8882116.545 8880866 8882545 + gene protein_coding_gene TRUE TRUE AT5G25500.1 similar to hypothetical protein MtrDRAFT_AC121239g28v1 [Medicago truncatula] (GB:ABE78448.1); similar to Os11g0207300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067465.1) 0.00110162882139098 0.0118400342892456 0.99077352717764 1 0.0451244542045903 5.00161591469911 0.00110162882139098 0.0790433276824323 AT5G41940_at 7.11450033879973 7.36447971730617 7.92744721301725 8.14507174253566 8.24823838960132 8.28435863467284 7.06435267961782 6.76562508221617 6.96686871482369 6.70345057435583 7.82410976038125 7.75806315208416 7.59151720022424 7.7488680203923 7.57431373940014 7.91683421002074 7.97949535915608 7.66931462744896 6.90992147808599 0.140665264725614 0.145684118403145 0.143873458343814 0.149132911792474 0.150529817525793 0.148307241926648 0.152416338348812 0.145918041591471 0.156965882260372 0.150711627458145 0.146756844271773 0.141262622627157 0.139922061945614 0.143079593666921 0.143223783235137 0.139018692126235 0.142128420210696 0.141516363163888 0.154024496331857 5 5 + 16799269 16802596 16801055.421 16799175 16802804 + gene protein_coding_gene TRUE TRUE AT5G41940.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to RabGAP/TBC [Medicago truncatula] (GB:ABE88406.1); similar to Os10g0518100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065072.1); similar to Os09g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063739.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) -0.00105274964197766 -0.0113760860920952 0.99113504633386 1 0.0451189740729489 14.9232066069177 -0.00105274964197766 0.0774683943184592 AT5G42820_at 7.6142073787266 7.7268324980149 8.27931212113767 8.1222792324465 8.68032920565345 8.40352180026224 7.32655264588704 7.2111749092509 6.77073542436471 6.96597425366998 8.1040728925659 7.8760071761148 8.07240459432887 8.0075182909811 7.90475294986912 8.08625724912827 7.74974946119256 7.71073678431091 7.030255469012 0.159152900291404 0.155945518851868 0.152888757958459 0.149425553085192 0.157056812276005 0.160521510262457 0.151762532535686 0.150302294764480 0.160883100113570 0.170894311749926 0.157363199733378 0.153548960726658 0.152861286276826 0.158112204165021 0.147714754715044 0.152832082374265 0.153896751408537 0.154642407082014 0.160966176651467 5 5 - 17187743 17188203 17187978.545 17186511 17188932 - gene protein_coding_gene TRUE TRUE AT5G42820.1|AT5G42820.2 ATU2AF35B; RNA binding U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. similar to ATU2AF35A, RNA binding [Arabidopsis thaliana] (TAIR:AT1G27650.1); similar to RNA-binding re (GB:ABE79661.1); contains InterPro domain U2 auxiliary factor small subunit; (InterPro:IPR009145); contains InterPro domain RNA recognition, region 1; (InterPro:IPR003954); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif); (InterPro:IPR000504) -0.000946525098454387 -0.0107615367144029 0.991613920611082 1 0.0451120522552875 15.3511557941692 -0.000946525098454387 0.0617390812564291 AT5G57370_at 5.25452050967094 5.07766305854925 6.19768084879933 6.02298902418497 5.43235998287664 5.66602364284085 4.22332971974761 4.94319428139663 4.29116507863228 4.02118917593032 5.04328745126784 5.03752299452862 5.11158032097645 4.83803814456172 5.19245727511312 4.91452942549874 4.85411988923967 4.80033431543573 3.96433859702254 0.199129760223924 0.201965783403628 0.199659599681511 0.203163274451305 0.204847485095248 0.200241431130684 0.203188534200534 0.198818115705950 0.210436735726373 0.202089625581268 0.200886873031668 0.199446919258502 0.204034816347137 0.207405446807504 0.198905890475457 0.208957429358568 0.199679178652099 0.202081531816934 0.213393135781595 5 5 + 23262105 23262672 23262348.909 23261960 23263646 + gene protein_coding_gene TRUE TRUE AT5G57370.1 similar to U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] (TAIR:AT1G60900.1); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABE84015.1) -0.00122116856508359 -0.0105180766103551 0.991803632587827 1 0.0451094163831711 9.88532747231134 -0.00122116856508359 0.137858378362780 AT5G61090_at 0.934307069156596 1.37767477852352 1.36599528036578 1.44728946374585 1.12315222206517 0.95461509460918 1.14653012227355 1.02566891776990 1.41593829605729 1.80061839703956 1.36019839819066 1.63362958050047 1.42259020740108 1.75448101450659 1.10955601430731 1.77374636475685 1.57783603732835 1.58263787358353 1.13130030015668 0.215141956014782 0.219473171979245 0.230163040501925 0.222549354604594 0.221686324273785 0.220780538944623 0.223340245626449 0.222871045489459 0.224327843787564 0.22684624709359 0.222004148292254 0.223034508564211 0.21903730358205 0.223082551806777 0.222679429802155 0.218762212741034 0.219566952515805 0.216706939457102 0.222886140062798 5 5 - 24593600 24594397 24594143.545 24593552 24594940 - gene protein_coding_gene TRUE TRUE AT5G61090.1 proline-rich family protein similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G61120.1); similar to hypothetical protein MG05036.4 [Magnaporthe grisea 70-15] (GB:XP_359741.1); contains domain DYSTROGLYCAN-RELATED (PTHR21559); contains domain UNCHARACTERIZED (PTHR21559:SF5) 0.000938645101829505 0.00984924726482253 0.992324808716655 1 0.0451024855969535 2.65996416893354 0.000938645101829505 0.0858664848478413 AT5G24390_at 1.39976241329718 0.91370445371272 1.56831091000616 1.34812756434468 1.28377831492256 1.34419675963936 1.43330212091777 1.31700029531076 1.40840300168459 1.29407200821629 1.58352097550648 1.25397460939904 1.74687845222318 1.30453325365205 1.80782202918438 1.07120867197603 1.71706728050363 1.63855827745188 1.62794627905504 0.178077632540205 0.177096914996644 0.177096914996644 0.180810537564933 0.177096914996644 0.181543850189504 0.184457577687739 0.177096914996644 0.177096914996644 0.181234301333035 0.179971985697900 0.177096914996644 0.185310252964687 0.180833383788974 0.185638993699430 0.179451106044591 0.182737486302565 0.181358764692789 0.187310909379951 5 5 - 8327009 8327539 8327228.545 8326610 8329493 - gene protein_coding_gene TRUE TRUE AT5G24390.1 RabGAP/TBC domain-containing protein similar to RAB GTPase activator [Arabidopsis thaliana] (TAIR:AT3G49350.1); similar to RabGAP/TBC [Medicago truncatula] (GB:ABE88406.1); similar to Os09g0528800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063739.1); similar to Os08g0547200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062427.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) 0.000833798890884863 0.00846024105840218 0.993407184536843 1 0.0450895461872145 2.80548245738009 0.000833798890884863 0.0950871285234617 AT5G47910_at 8.20862207347404 8.51198875951966 9.63124688914475 9.72289903676686 9.26775870651857 8.86193876044801 7.9690502229869 7.96850502862127 7.09832188854284 7.28605623677912 7.77963720915485 8.45506558529343 7.39766552438533 8.20702934358391 7.05122265709026 7.97542146913338 7.58673846194178 7.96699203180818 7.27806861439298 0.208115731933186 0.208370895450791 0.217582444776337 0.222015693038151 0.215276767332618 0.208115731933186 0.216403877198189 0.212115570464846 0.208115731933186 0.213381046831226 0.208115731933186 0.208115731933186 0.213642663028118 0.212872199788288 0.217559719793356 0.208115731933186 0.222806876729025 0.208115731933186 0.212397849230289 5 5 + 19418332 19418955 19418600 19414669 19419287 + gene protein_coding_gene TRUE TRUE AT5G47910.1 RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. similar to ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07390.1); similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to ATRBOHB (RESPIRATORY BURST OXIDASE HOMOLOG B), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G09090.2); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); similar to whitefly-induced gp91-phox [Lycopersicon esculentum] (GB:AAF73104.1); similar to respiratory burst oxidase homolog [Nicotiana benthamiana] (GB:BAC56865.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Cytochrome b-245, heavy chain; (InterPro:IPR000778); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro domain Ferric reductase, NAD binding; (InterPro:IPR013121); contains InterPro domain FAD-binding 8; (InterPro:IPR013112); contains InterPro domain Ferric reductase-like transmembrane component, N-terminal; (InterPro:IPR013130); contains InterPro domain Ferric reductase-like transmembrane component; (InterPro:IPR002916); contains InterPro domain NADPH oxidase Respiratory burst; (InterPro:IPR013623) -0.000626277688100085 -0.00649538888979483 0.994938308546378 1 0.0450745952001126 16.2793947422869 -0.000626277688100085 0.0891057755193008 AT5G20700_at 10.0081315727306 10.5210763041610 10.8981116379033 11.2424875586871 11.0493089702370 10.9233564547664 11.1017612250954 11.2039844269785 9.92425663788157 10.5114814278625 11.1287736633725 10.9613186806411 11.3667631913196 11.0751316152158 10.6315225961947 11.2807901061168 11.5706889969659 10.6964688970584 10.1863640412817 0.0992723462240861 0.091331554803571 0.0933537839541767 0.0905320331703761 0.0910993641355114 0.0950289847056956 0.090638916325535 0.0905320331703761 0.0993865897022295 0.0937496098843268 0.093029270982394 0.0949598370380488 0.0945525107856105 0.0945865432623666 0.0981458827763228 0.091848846025851 0.099591518103202 0.0958036907761177 0.0935487168364249 5 5 - 7006182 7006804 7006548.727 7005846 7007119 - gene protein_coding_gene TRUE TRUE AT5G20700.1 senescence-associated protein-related similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT1G74940.1); similar to Protein of unknown function DUF581 [Medicago truncatula] (GB:ABE90961.1); contains InterPro domain Protein of unknown function DUF581; (InterPro:IPR007650) 0.000678219968945903 0.00649187449351507 0.994941047183986 1 0.0450745719778623 21.5166770625045 0.000678219968945903 0.110541257757241 AT5G46700_at 2.96561742412623 4.13197963223551 2.31841703471283 3.05230002952302 3.09875207311202 2.57071306599778 2.87845924176568 3.36062394617932 3.01955080272772 3.16894697886305 4.97522582602589 6.20633352085495 4.62901603557564 5.50045139875768 6.05365470432685 5.09025151237438 3.56757707303653 5.1511467220187 3.67929639326529 0.300851374635427 0.304495625298874 0.310440317689086 0.312976829525721 0.303530937025718 0.318514655215409 0.30453182237438 0.300742447853572 0.300742447853572 0.304362700487983 0.304554772554347 0.307318837588848 0.305060876424556 0.307163472852899 0.306551340057554 0.31279718676108 0.325016269411159 0.308528091465495 0.301163195059633 5 5|0 +|/ 18968485 18969593 18969051.2 18968144 18969856 + gene protein_coding_gene TRUE TRUE AT5G46700.1 TRN2 (TORNADO 2) Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. similar to TET2 (TETRASPANIN2) [Arabidopsis thaliana] (TAIR:AT2G19580.1); similar to CD9/CD37/CD63 antigen [Medicago truncatula] (GB:ABE79193.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) 0.00110837726240276 0.00604820182579909 0.995286785235451 1 0.0450717412449142 7.26509371799322 0.00110837726240276 0.268669416342228 AT5G45910_at -0.119230415503655 0.212958110204137 0.559578831269552 0.519301151929846 0.35367733572049 0.349611481342085 0.3432585032859 0.309455127911192 0.611487131703308 0.217765470769425 -0.127728789278910 0.434352874311327 0.227167206487363 0.624927485076087 0.787575415003413 0.354815826074468 0.175974252917273 -0.0864861904964933 0.564138589348357 0.224282525247095 0.223969563803568 0.223510722670840 0.223510722670840 0.228350419745967 0.22712618603922 0.223510722670840 0.226047218905689 0.230517683901552 0.227933622894997 0.225177042912770 0.233150043893394 0.232799418156534 0.226595744628249 0.223510722670840 0.223510722670840 0.228096613534185 0.229296537853243 0.223510722670840 5 5 - 18637648 18638411 18637931.364 18637526 18639528 - gene protein_coding_gene TRUE TRUE AT5G45910.1 GDSL-motif lipase/hydrolase family protein similar to ARAB-1 (Arabidopsis lipase), carboxylic ester hydrolase [Arabidopsis thaliana] (TAIR:AT1G28670.1); similar to putative esterase [Oryza sativa (japonica cultivar-group)] (GB:BAA94228.1); similar to Os01g0215700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042396.1); contains InterPro domain Lipolytic enzyme, G-D-S-L; (InterPro:IPR001087) -0.00048859495983325 -0.00561350716230213 0.995625528038561 1 0.0450691620581767 0.697720511079366 -0.00048859495983325 0.0582067779417377 AT5G05680_at 3.498494880514 3.63692517453073 3.79494552250615 4.34819892647913 4.10028751790133 4.29872880045232 2.977866074847 2.73994235520916 2.67518807697346 2.77672782587666 2.81967814344091 2.69893220491479 2.85672554152491 2.81613773323554 2.85014428419828 2.88359817910519 3.18487547985612 2.76810207641139 2.83293619560747 0.237364228255841 0.237135337296994 0.257436185220875 0.246623373346391 0.249502384494022 0.248058699096557 0.248697175768642 0.245578012946554 0.249892824895404 0.240550738242539 0.238130142920786 0.238249072041143 0.242444593560156 0.261429907615335 0.248588859936712 0.240212785119278 0.239331125828715 0.241090309020988 0.239090038346384 5 0|5 /|+ 1701867 1702431 1702170.778 1698271 1702646 + gene protein_coding_gene TRUE TRUE AT5G05680.1 nuclear pore complex protein-related similar to B0402A04.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67135.1); similar to Os04g0608400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053813.1); similar to OSJNBa0060N03.11 [Oryza sativa (japonica cultivar-group)] (GB:CAE03646.2); contains InterPro domain WD40-like; (InterPro:IPR011046) 0.000576933904037347 0.00548489685504916 0.995725749864084 1 0.0450684358306134 6.48511944229919 0.000576933904037347 0.112317531588327 AT5G11990_at 1.42162730431443 1.72223704527522 1.77547074911887 1.63269312048616 1.65129048269058 1.82039205026929 1.48286272334783 1.37451828141906 2.07717282228855 1.92876605545571 1.94494577462420 2.31303681190135 1.72742932643775 1.89918782250527 2.44566267730893 2.39978084301135 1.83000089068042 2.01568163581625 2.01199888162524 0.238048898072111 0.234130944551647 0.232389232954643 0.239769476069568 0.230059294014841 0.241991573891556 0.23698598056008 0.234933911892925 0.245537524919161 0.232462224057554 0.234933522732773 0.229347950701085 0.237785217867139 0.229347950701085 0.241669829304374 0.229826534171835 0.235236876380741 0.240430310248308 0.232827234938269 5 5 - 3872669 3873165 3872885.182 3872652 3873197 - gene protein_coding_gene TRUE TRUE AT5G11990.1 proline-rich family protein similar to leucine-rich repeat family protein / extensin family protein [Arabidopsis thaliana] (TAIR:AT4G33970.1); similar to putative membrane protein [Emiliania huxleyi virus 86] (GB:YP_294122.1); contains InterPro domain Glutelin; (InterPro:IPR000480) -0.000483397121759488 -0.00540267951474766 0.995789819201503 1 0.0450679803906778 3.64910895756961 -0.000483397121759488 0.0672658660672926 AT5G44140_at 1.78969407489375 1.99506207948405 2.18426656392353 2.06648953780483 1.72382180647066 1.52435421066908 1.67828200327459 1.51695216856677 2.2484039304837 1.90435205631786 2.07169885783677 2.27495444244473 2.28253709967383 1.98099249768761 2.02243259157891 1.96943078532258 2.33709791095851 2.08271131607726 1.67594928993458 0.210067058445281 0.213392006385067 0.220213158377703 0.23238449643376 0.223414671917596 0.219176499661820 0.216944127538824 0.212980070352996 0.223508857917700 0.223985228513882 0.210067058445281 0.210067058445281 0.220826782389044 0.210067058445281 0.219257158899570 0.211886761735002 0.221979308744071 0.215613725198599 0.211053924456238 5 5 + 17780162 17780829 17780455.636 17779718 17780856 + gene protein_coding_gene TRUE TRUE AT5G44140.1 ATPHB7 (PROHIBITIN 7) similar to ATPHB2 (PROHIBITIN 2) [Arabidopsis thaliana] (TAIR:AT1G03860.3); similar to prohibitin 1-like protein [Brassica napus] (GB:AAK07610.1); contains InterPro domain Prohibitin; (InterPro:IPR000163); contains InterPro domain Band 7 protein; (InterPro:IPR001107) 0.000377097008991079 0.00430450560413681 0.996645593721833 1 0.045062556621984 3.84518215394069 0.000377097008991079 0.0604112199223734 AT5G35100_at 7.44631547945753 7.90683036694847 8.1580428794737 8.22004026138075 8.19837513490863 8.685844395509 7.34357926542444 8.29210486510488 8.34380828501081 7.90111124794314 9.30790385493127 9.27767011024212 9.08134569396845 9.34305219582482 9.28595926839341 9.41267297226329 8.55658508579787 9.13891072608277 7.78529122150697 0.166869801859999 0.164651518606835 0.177438626492138 0.165002856149463 0.166852463877615 0.174054964468917 0.17615052476662 0.165932017241051 0.171266390046979 0.172110482056006 0.168225513902011 0.165221079049124 0.168440222153151 0.168146090292357 0.167040051642437 0.162578498772565 0.184926339606467 0.167790189032886 0.170644394766067 5 5 - 13377704 13378320 13378101.182 13377513 13378620 - gene protein_coding_gene TRUE TRUE AT5G35100.1|AT5G35100.2 peptidyl-prolyl cis-trans isomerase| similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT1G74070.1); similar to Cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL51850.1); similar to Os08g0292600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061466.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130)|similar to CYP5 (cyclophilin 5) [Arabidopsis thaliana] (TAIR:AT2G29960.2); similar to Cyclophilin type peptidyl-prolyl cis-trans isomerase (ISS) [Ostreococcus tauri] (GB:CAL51850.1); similar to Os08g0292600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061466.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, cyclophilin type; (InterPro:IPR002130) -0.000560741189111091 -0.00381396373406928 0.997027860022728 1 0.0450605303987766 16.6241829509884 -0.000560741189111091 0.201312842141129 AT5G51630_at 3.91386608714452 3.69085767253824 4.80113943533972 4.70660183504583 4.14475480892115 3.29640509591182 2.92238742471724 2.53267240002223 3.11572173022684 3.34714298417134 3.61506878074611 4.23811207681481 3.77177687501408 3.76179503388601 3.47688626105922 3.68600951684641 3.15907430723094 3.75590319820029 3.64562393791829 0.252274486813355 0.254044830486909 0.253135773516312 0.257976165119373 0.253317852438325 0.256619082524289 0.253346799578173 0.263333298813475 0.257070103602810 0.247060284796085 0.250389789500783 0.246481152351806 0.252802582069682 0.253803838847183 0.249441042807263 0.248239179631346 0.257861057728033 0.260316961610287 0.252416111236993 5 5|0 +|/ 20991068 20991464 20991265.111 20986847 20992142 + gene protein_coding_gene TRUE TRUE AT5G51630.1|AT5G51630.2 disease resistance protein (TIR-NBS-LRR class), putative similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16940.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.2); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593); contains InterPro domain Winged helix repressor DNA-binding; (InterPro:IPR011991)|similar to SNC1 (SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G16890.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G16940.1); similar to RPP5 (RECOGNITION OF PERONOSPORA PARASITICA 5) [Arabidopsis thaliana] (TAIR:AT4G16950.2); similar to nematode resistance-like protein [Solanum tuberosum] (GB:AAP44393.1); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat 3; (InterPro:IPR011713); contains InterPro domain AAA ATPase; (InterPro:IPR003593) 0.000390376072392673 0.00300941605541015 0.997654824390698 1 0.0450577372852563 7.27737283178687 0.000390376072392673 0.166909868308169